Query 000687
Match_columns 1350
No_of_seqs 950 out of 4700
Neff 8.1
Searched_HMMs 46136
Date Mon Apr 1 21:51:52 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-220 4E-225 2027.4 129.3 1216 86-1324 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 1E-174 3E-179 1745.1 155.7 1223 85-1322 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 4E-167 9E-172 1589.4 127.2 1095 172-1322 263-1375(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-157 2E-162 1595.8 150.7 1097 172-1325 366-1477(1622)
5 PLN03232 ABC transporter C fam 100.0 1E-156 2E-161 1588.9 147.2 1155 105-1325 304-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 1E-151 2E-156 1542.7 151.3 1189 88-1321 307-1519(1522)
7 PTZ00243 ABC transporter; Prov 100.0 3E-145 6E-150 1473.6 147.7 1169 105-1324 247-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 4E-143 9E-148 1453.3 149.1 1170 112-1327 90-1457(1490)
9 KOG0058 Peptide exporter, ABC 100.0 1E-110 3E-115 991.2 68.6 574 86-669 132-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 1E-109 2E-114 983.9 66.3 575 743-1325 133-707 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 3E-109 7E-114 1031.4 72.4 656 6-668 545-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 1.8E-92 4E-97 877.0 73.6 570 86-667 139-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 1.1E-92 2.4E-97 878.9 71.7 563 750-1323 147-709 (709)
14 PTZ00265 multidrug resistance 100.0 2.9E-87 6.4E-92 900.1 77.5 570 88-667 812-1465(1466)
15 PRK11174 cysteine/glutathione 100.0 7.4E-87 1.6E-91 843.5 76.6 568 88-668 9-585 (588)
16 COG1132 MdlB ABC-type multidru 100.0 3.9E-86 8.4E-91 832.0 76.7 562 89-668 4-565 (567)
17 COG1132 MdlB ABC-type multidru 100.0 4.5E-86 9.9E-91 831.4 75.0 553 755-1323 13-565 (567)
18 TIGR00958 3a01208 Conjugate Tr 100.0 2.9E-85 6.2E-90 839.7 76.3 566 85-663 145-710 (711)
19 PRK11174 cysteine/glutathione 100.0 6.7E-85 1.4E-89 825.7 74.9 568 745-1324 10-586 (588)
20 TIGR00958 3a01208 Conjugate Tr 100.0 3.1E-84 6.7E-89 830.2 74.9 565 743-1319 147-711 (711)
21 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-83 3.6E-88 824.9 78.7 564 87-667 121-685 (686)
22 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-83 3.3E-88 828.1 76.3 565 87-665 142-707 (708)
23 PRK11160 cysteine/glutathione 100.0 9E-83 1.9E-87 799.5 77.0 567 89-665 4-572 (574)
24 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.6E-83 1.4E-87 819.4 76.6 553 754-1322 133-685 (686)
25 KOG0054 Multidrug resistance-a 100.0 9.7E-85 2.1E-89 832.9 59.1 650 6-666 700-1374(1381)
26 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.3E-83 1.4E-87 823.5 76.2 565 87-664 140-709 (710)
27 KOG0056 Heavy metal exporter H 100.0 2.4E-86 5.2E-91 735.4 37.0 551 109-669 222-776 (790)
28 TIGR03375 type_I_sec_LssB type 100.0 1.5E-82 3.3E-87 817.1 75.9 557 87-654 133-689 (694)
29 TIGR01193 bacteriocin_ABC ABC- 100.0 1.6E-82 3.4E-87 818.7 74.0 563 745-1320 144-707 (708)
30 TIGR00957 MRP_assoc_pro multi 100.0 8.7E-83 1.9E-87 867.6 70.9 570 84-666 947-1519(1522)
31 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-82 1.5E-86 813.8 73.8 562 747-1319 144-709 (710)
32 PRK11160 cysteine/glutathione 100.0 1.7E-81 3.8E-86 787.8 75.3 565 747-1321 6-573 (574)
33 PLN03130 ABC transporter C fam 100.0 2.7E-82 5.9E-87 860.0 73.1 571 82-669 894-1476(1622)
34 PRK11176 lipid transporter ATP 100.0 3.3E-81 7.2E-86 791.6 77.4 566 89-667 13-579 (582)
35 COG4988 CydD ABC-type transpor 100.0 3.9E-81 8.5E-86 729.1 71.1 551 108-669 6-557 (559)
36 KOG0056 Heavy metal exporter H 100.0 9.5E-85 2.1E-89 722.7 37.9 505 813-1325 272-777 (790)
37 TIGR01846 type_I_sec_HlyB type 100.0 8.3E-81 1.8E-85 800.2 77.9 568 87-667 125-692 (694)
38 PRK10790 putative multidrug tr 100.0 1.7E-80 3.8E-85 785.4 78.0 566 89-669 11-577 (592)
39 TIGR03375 type_I_sec_LssB type 100.0 6.2E-81 1.3E-85 802.2 74.6 553 748-1310 138-690 (694)
40 COG4988 CydD ABC-type transpor 100.0 2.4E-80 5.2E-85 722.5 69.9 551 763-1324 6-557 (559)
41 PRK10790 putative multidrug tr 100.0 4.6E-80 1E-84 781.5 76.9 567 745-1325 11-578 (592)
42 PRK11176 lipid transporter ATP 100.0 3.6E-80 7.9E-85 782.2 75.8 564 748-1323 16-580 (582)
43 KOG0057 Mitochondrial Fe/S clu 100.0 6.3E-81 1.4E-85 712.8 61.2 571 88-668 12-587 (591)
44 PLN03232 ABC transporter C fam 100.0 3.9E-81 8.4E-86 850.3 70.3 648 6-669 797-1473(1495)
45 TIGR02203 MsbA_lipidA lipid A 100.0 8.3E-80 1.8E-84 778.3 76.2 565 90-667 3-568 (571)
46 TIGR01846 type_I_sec_HlyB type 100.0 9.8E-80 2.1E-84 790.3 76.0 564 748-1323 130-693 (694)
47 PTZ00243 ABC transporter; Prov 100.0 4.8E-80 1E-84 837.5 76.9 513 153-669 1004-1548(1560)
48 TIGR01192 chvA glucan exporter 100.0 3.5E-79 7.6E-84 767.8 78.2 564 89-667 7-570 (585)
49 PRK13657 cyclic beta-1,2-gluca 100.0 5.9E-79 1.3E-83 770.1 78.4 566 88-668 6-571 (588)
50 TIGR02868 CydC thiol reductant 100.0 8.1E-80 1.8E-84 769.6 69.7 526 90-625 2-529 (529)
51 PRK10789 putative multidrug tr 100.0 6.1E-79 1.3E-83 764.9 74.0 540 118-668 11-551 (569)
52 KOG0057 Mitochondrial Fe/S clu 100.0 5.4E-80 1.2E-84 705.1 58.0 543 770-1323 43-587 (591)
53 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-78 4.5E-83 765.8 77.3 570 89-667 6-575 (576)
54 TIGR02203 MsbA_lipidA lipid A 100.0 1.9E-78 4.2E-83 765.8 75.2 563 748-1322 5-568 (571)
55 COG4987 CydC ABC-type transpor 100.0 1.7E-78 3.6E-83 692.9 64.1 504 808-1321 66-572 (573)
56 PRK13657 cyclic beta-1,2-gluca 100.0 1.1E-77 2.5E-82 758.4 76.4 566 744-1323 6-571 (588)
57 TIGR02868 CydC thiol reductant 100.0 3.1E-78 6.6E-83 755.4 69.9 524 749-1280 5-529 (529)
58 TIGR01192 chvA glucan exporter 100.0 3.8E-77 8.2E-82 749.4 76.7 567 745-1325 7-573 (585)
59 TIGR02204 MsbA_rel ABC transpo 100.0 5.2E-77 1.1E-81 753.0 75.7 566 749-1322 10-575 (576)
60 PRK10789 putative multidrug tr 100.0 3.3E-77 7.1E-82 749.2 72.4 543 772-1325 10-553 (569)
61 TIGR02857 CydD thiol reductant 100.0 8.6E-77 1.9E-81 742.3 72.0 525 104-637 5-529 (529)
62 COG4987 CydC ABC-type transpor 100.0 2.2E-76 4.7E-81 675.5 64.9 503 155-665 66-571 (573)
63 COG5265 ATM1 ABC-type transpor 100.0 4.2E-79 9.2E-84 675.2 39.7 493 821-1320 3-496 (497)
64 COG5265 ATM1 ABC-type transpor 100.0 1.4E-78 3.1E-83 670.9 41.6 491 169-665 4-496 (497)
65 TIGR01842 type_I_sec_PrtD type 100.0 2.8E-75 6.2E-80 729.3 74.0 534 104-654 8-543 (544)
66 TIGR02857 CydD thiol reductant 100.0 4.2E-75 9.2E-80 727.1 70.7 526 758-1292 4-529 (529)
67 COG1123 ATPase components of v 100.0 2.7E-77 5.8E-82 701.5 46.9 485 427-1321 5-531 (539)
68 TIGR01271 CFTR_protein cystic 100.0 4E-74 8.7E-79 780.1 74.2 503 157-670 935-1455(1490)
69 TIGR01842 type_I_sec_PrtD type 100.0 1.9E-73 4.2E-78 712.7 72.7 535 758-1309 7-543 (544)
70 TIGR01194 cyc_pep_trnsptr cycl 100.0 5.6E-72 1.2E-76 699.1 68.7 534 88-645 4-551 (555)
71 PRK10261 glutathione transport 100.0 6.9E-74 1.5E-78 722.4 48.6 502 426-1321 11-566 (623)
72 PRK13549 xylose transporter AT 100.0 1.1E-73 2.5E-78 707.9 44.9 462 427-1307 5-493 (506)
73 PRK15134 microcin C ABC transp 100.0 1.4E-72 3E-77 702.0 51.1 465 427-1309 5-516 (529)
74 PRK09700 D-allose transporter 100.0 2.3E-72 5.1E-77 697.5 47.2 459 427-1305 5-495 (510)
75 TIGR01194 cyc_pep_trnsptr cycl 100.0 6.3E-70 1.4E-74 680.6 66.4 534 745-1300 5-551 (555)
76 COG4172 ABC-type uncharacteriz 100.0 1.3E-71 2.7E-76 610.2 43.2 472 427-1318 6-525 (534)
77 PRK10762 D-ribose transporter 100.0 6.1E-72 1.3E-76 691.7 45.0 454 427-1307 4-483 (501)
78 TIGR03269 met_CoM_red_A2 methy 100.0 8.7E-72 1.9E-76 694.1 44.3 458 428-1309 1-518 (520)
79 TIGR01257 rim_protein retinal- 100.0 4.9E-69 1.1E-73 717.1 72.4 225 426-659 927-1155(2272)
80 PRK11288 araG L-arabinose tran 100.0 1.6E-71 3.5E-76 687.9 43.9 456 427-1307 4-484 (501)
81 TIGR02633 xylG D-xylose ABC tr 100.0 4.7E-71 1E-75 684.9 46.0 459 428-1305 2-489 (500)
82 COG4618 ArpD ABC-type protease 100.0 1.4E-69 3.1E-74 612.7 53.0 494 804-1309 67-561 (580)
83 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-70 2.8E-75 680.1 48.6 466 427-1309 11-493 (510)
84 COG4618 ArpD ABC-type protease 100.0 2.6E-69 5.6E-74 610.7 53.6 535 103-654 25-561 (580)
85 PRK10982 galactose/methyl gala 100.0 2.5E-70 5.5E-75 676.2 44.2 453 430-1306 1-478 (491)
86 PRK10938 putative molybdenum t 100.0 2.2E-69 4.7E-74 668.3 44.7 453 427-1301 3-485 (490)
87 TIGR00956 3a01205 Pleiotropic 100.0 3.2E-67 6.9E-72 706.5 66.9 212 1082-1304 759-989 (1394)
88 PRK10522 multidrug transporter 100.0 2.2E-66 4.7E-71 649.0 68.4 526 92-650 4-536 (547)
89 PRK15064 ABC transporter ATP-b 100.0 1.1E-67 2.4E-72 658.2 53.8 483 427-1309 1-526 (530)
90 PRK11819 putative ABC transpor 100.0 3.8E-66 8.2E-71 646.1 56.1 483 427-1309 6-534 (556)
91 PRK10522 multidrug transporter 100.0 1.2E-64 2.5E-69 633.4 66.1 471 814-1307 62-538 (547)
92 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-65 2.3E-70 642.1 56.6 482 427-1308 4-531 (552)
93 TIGR00954 3a01203 Peroxysomal 100.0 5.4E-64 1.2E-68 634.8 63.4 531 88-639 78-653 (659)
94 PRK10636 putative ABC transpor 100.0 3.4E-64 7.4E-69 634.3 54.2 200 1082-1307 312-516 (638)
95 PLN03140 ABC transporter G fam 100.0 1.3E-62 2.8E-67 657.9 65.8 213 1082-1304 867-1106(1470)
96 PRK11147 ABC transporter ATPas 100.0 1.5E-62 3.2E-67 621.7 55.9 200 1082-1307 319-527 (635)
97 PLN03073 ABC transporter F fam 100.0 7.4E-63 1.6E-67 622.0 50.2 200 1082-1307 508-713 (718)
98 COG1129 MglA ABC-type sugar tr 100.0 6.7E-63 1.5E-67 576.7 42.7 452 427-1300 8-482 (500)
99 TIGR00954 3a01203 Peroxysomal 100.0 9.4E-61 2E-65 605.2 64.0 532 743-1294 77-653 (659)
100 PRK13409 putative ATPase RIL; 100.0 2.2E-62 4.9E-67 608.0 37.8 192 1082-1302 340-536 (590)
101 COG0488 Uup ATPase components 100.0 5.8E-60 1.3E-64 569.3 49.4 487 427-1309 3-526 (530)
102 COG3845 ABC-type uncharacteriz 100.0 6E-60 1.3E-64 537.8 40.0 462 427-1305 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 2E-53 4.3E-58 480.8 27.0 239 1081-1324 1-239 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 1.6E-51 3.4E-56 422.2 22.5 227 427-663 2-235 (240)
105 COG1135 AbcC ABC-type metal io 100.0 6.2E-50 1.3E-54 431.0 22.3 234 427-665 1-243 (339)
106 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.3E-48 2.8E-53 441.7 29.5 238 426-668 1-238 (275)
107 COG1126 GlnQ ABC-type polar am 100.0 3E-49 6.5E-54 405.4 21.3 217 1082-1313 2-229 (240)
108 COG1125 OpuBA ABC-type proline 100.0 5.4E-49 1.2E-53 410.3 20.7 228 427-664 1-236 (309)
109 PRK14257 phosphate ABC transpo 100.0 4.5E-48 9.7E-53 448.5 25.8 224 1078-1309 76-314 (329)
110 COG1135 AbcC ABC-type metal io 100.0 2.4E-48 5.2E-53 418.8 21.5 218 1083-1312 2-234 (339)
111 COG1117 PstB ABC-type phosphat 100.0 1.9E-48 4.1E-53 396.8 19.2 219 427-655 7-239 (253)
112 KOG0927 Predicted transporter 100.0 2E-46 4.4E-51 427.3 31.7 194 1082-1300 389-587 (614)
113 PRK14257 phosphate ABC transpo 100.0 2.4E-46 5.3E-51 434.0 27.7 224 424-655 77-315 (329)
114 COG1117 PstB ABC-type phosphat 100.0 4.6E-47 1E-51 386.6 18.0 218 1082-1309 7-238 (253)
115 cd03252 ABCC_Hemolysin The ABC 100.0 6.5E-46 1.4E-50 415.6 27.8 236 1083-1321 1-236 (237)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 1.3E-45 2.8E-50 417.3 28.7 241 1079-1322 16-256 (257)
117 COG1125 OpuBA ABC-type proline 100.0 1.4E-46 3.1E-51 392.2 18.9 220 1083-1317 2-233 (309)
118 COG4615 PvdE ABC-type sideroph 100.0 8.4E-43 1.8E-47 381.7 48.4 472 152-645 53-529 (546)
119 cd03252 ABCC_Hemolysin The ABC 100.0 5.9E-45 1.3E-49 407.8 28.0 235 428-665 1-235 (237)
120 COG1127 Ttg2A ABC-type transpo 100.0 3.4E-45 7.3E-50 381.5 21.3 228 426-664 7-245 (263)
121 COG1120 FepC ABC-type cobalami 100.0 2.3E-45 5E-50 399.1 20.6 214 427-654 2-229 (258)
122 COG3839 MalK ABC-type sugar tr 100.0 6.5E-45 1.4E-49 410.6 23.1 220 427-662 3-232 (338)
123 cd03253 ABCC_ATM1_transporter 100.0 2.5E-44 5.5E-49 402.6 27.4 235 1083-1321 1-235 (236)
124 cd03251 ABCC_MsbA MsbA is an e 100.0 2.3E-44 4.9E-49 402.4 26.5 233 1083-1318 1-233 (234)
125 cd03244 ABCC_MRP_domain2 Domai 100.0 2.7E-44 5.9E-49 398.2 26.5 221 1081-1303 1-221 (221)
126 COG3638 ABC-type phosphate/pho 100.0 3.9E-45 8.5E-50 380.0 18.2 217 427-653 3-237 (258)
127 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.2E-44 6.9E-49 402.1 27.0 235 1083-1319 1-235 (238)
128 KOG0065 Pleiotropic drug resis 100.0 9.5E-44 2.1E-48 443.5 33.9 208 443-653 128-351 (1391)
129 cd03288 ABCC_SUR2 The SUR doma 100.0 7.4E-44 1.6E-48 402.9 29.3 240 423-665 15-254 (257)
130 TIGR02314 ABC_MetN D-methionin 100.0 2.7E-44 5.9E-49 417.1 25.7 232 427-665 1-242 (343)
131 cd03254 ABCC_Glucan_exporter_l 100.0 5E-44 1.1E-48 398.3 26.5 227 1081-1309 1-227 (229)
132 COG2884 FtsE Predicted ATPase 100.0 1.2E-44 2.6E-49 362.5 18.8 208 427-647 1-220 (223)
133 COG1136 SalX ABC-type antimicr 100.0 2.9E-44 6.2E-49 383.1 22.9 210 428-644 2-222 (226)
134 COG3842 PotA ABC-type spermidi 100.0 1.4E-44 2.9E-49 410.2 21.0 214 426-655 4-228 (352)
135 cd03251 ABCC_MsbA MsbA is an e 100.0 1E-43 2.2E-48 397.1 27.1 226 428-654 1-226 (234)
136 TIGR02314 ABC_MetN D-methionin 100.0 3.6E-44 7.8E-49 416.1 24.2 226 1083-1320 2-242 (343)
137 COG3840 ThiQ ABC-type thiamine 100.0 2.6E-44 5.5E-49 356.5 19.5 209 428-654 2-220 (231)
138 cd03253 ABCC_ATM1_transporter 100.0 1.3E-43 2.8E-48 396.9 27.7 233 428-664 1-233 (236)
139 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-43 3.4E-48 394.3 27.6 227 426-654 1-227 (229)
140 COG1116 TauB ABC-type nitrate/ 100.0 3.8E-44 8.2E-49 380.9 21.2 202 427-643 3-212 (248)
141 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.7E-43 3.6E-48 396.4 27.4 227 428-654 1-227 (238)
142 COG1120 FepC ABC-type cobalami 100.0 6.8E-44 1.5E-48 387.7 22.3 214 1082-1309 2-229 (258)
143 COG1124 DppF ABC-type dipeptid 100.0 7.3E-44 1.6E-48 374.2 21.4 227 1082-1320 3-242 (252)
144 COG3839 MalK ABC-type sugar tr 100.0 8.1E-44 1.8E-48 401.7 23.1 218 1082-1316 3-230 (338)
145 COG1122 CbiO ABC-type cobalt t 100.0 1.1E-43 2.4E-48 387.5 22.8 215 427-654 3-229 (235)
146 COG1124 DppF ABC-type dipeptid 100.0 1.2E-43 2.5E-48 372.7 21.8 228 427-664 3-242 (252)
147 cd03244 ABCC_MRP_domain2 Domai 100.0 4.2E-43 9.1E-48 388.6 27.0 220 426-647 1-220 (221)
148 COG1127 Ttg2A ABC-type transpo 100.0 1.9E-43 4.2E-48 368.4 22.0 224 1082-1320 8-246 (263)
149 cd03245 ABCC_bacteriocin_expor 100.0 4.8E-43 1E-47 387.9 26.6 220 1081-1301 1-220 (220)
150 COG1122 CbiO ABC-type cobalt t 100.0 1.8E-43 3.9E-48 385.8 22.0 215 1082-1309 3-229 (235)
151 PRK13631 cbiO cobalt transport 100.0 5.8E-43 1.3E-47 404.8 27.3 221 1082-1309 21-266 (320)
152 KOG0062 ATPase component of AB 100.0 1.1E-42 2.4E-47 394.8 28.4 210 1081-1323 361-575 (582)
153 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.6E-43 1.2E-47 378.1 23.7 210 427-654 4-228 (254)
154 cd03248 ABCC_TAP TAP, the Tran 100.0 7.5E-43 1.6E-47 387.9 25.1 219 1079-1297 8-226 (226)
155 PRK13631 cbiO cobalt transport 100.0 8.8E-43 1.9E-47 403.3 26.5 222 426-654 20-266 (320)
156 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-42 3.7E-47 383.5 27.1 220 426-646 1-220 (220)
157 cd03261 ABC_Org_Solvent_Resist 100.0 7E-43 1.5E-47 390.4 23.2 213 1083-1309 1-227 (235)
158 cd03260 ABC_PstB_phosphate_tra 100.0 6.6E-43 1.4E-47 388.6 22.2 212 1083-1306 1-227 (227)
159 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-42 3E-47 375.1 23.8 210 1082-1309 4-228 (254)
160 COG2884 FtsE Predicted ATPase 100.0 3.6E-43 7.8E-48 351.9 17.6 208 1083-1303 2-221 (223)
161 COG4178 ABC-type uncharacteriz 100.0 5.1E-39 1.1E-43 383.1 55.9 474 802-1293 88-587 (604)
162 COG4615 PvdE ABC-type sideroph 100.0 1.3E-39 2.7E-44 356.9 46.5 473 804-1300 52-529 (546)
163 cd03248 ABCC_TAP TAP, the Tran 100.0 1.9E-42 4.2E-47 384.6 24.9 220 423-642 7-226 (226)
164 COG3638 ABC-type phosphate/pho 100.0 9.1E-43 2E-47 362.4 20.6 223 1082-1321 3-246 (258)
165 COG3840 ThiQ ABC-type thiamine 100.0 9.9E-43 2.1E-47 345.2 19.5 209 1083-1309 2-220 (231)
166 PRK13650 cbiO cobalt transport 100.0 1.8E-42 3.9E-47 395.6 24.3 217 1082-1309 4-230 (279)
167 COG4178 ABC-type uncharacteriz 100.0 7.1E-39 1.5E-43 381.8 55.9 468 151-638 90-587 (604)
168 COG1118 CysA ABC-type sulfate/ 100.0 4.7E-43 1E-47 376.6 18.0 213 427-655 2-229 (345)
169 PRK11432 fbpC ferric transport 100.0 3.1E-42 6.8E-47 402.2 25.9 225 426-662 5-235 (351)
170 PRK11650 ugpC glycerol-3-phosp 100.0 3.3E-42 7.1E-47 403.4 26.1 218 427-655 3-226 (356)
171 cd03261 ABC_Org_Solvent_Resist 100.0 4.1E-42 8.8E-47 384.2 25.6 217 428-654 1-227 (235)
172 COG3842 PotA ABC-type spermidi 100.0 5.7E-43 1.2E-47 397.0 18.9 221 1082-1319 5-236 (352)
173 COG1116 TauB ABC-type nitrate/ 100.0 1.7E-42 3.6E-47 368.4 21.2 197 1082-1297 3-211 (248)
174 PRK14269 phosphate ABC transpo 100.0 3.3E-42 7.1E-47 387.3 24.6 218 1082-1309 2-231 (246)
175 COG1136 SalX ABC-type antimicr 100.0 4.3E-42 9.3E-47 366.4 24.0 207 1083-1299 2-222 (226)
176 PRK14250 phosphate ABC transpo 100.0 4.9E-42 1.1E-46 384.5 25.7 224 1082-1320 3-232 (241)
177 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.5E-42 1.2E-46 375.4 25.5 204 1080-1303 4-207 (207)
178 PRK11153 metN DL-methionine tr 100.0 5.1E-42 1.1E-46 401.7 25.7 222 427-655 1-232 (343)
179 PRK11432 fbpC ferric transport 100.0 4.6E-42 1E-46 400.8 24.7 218 1081-1315 5-232 (351)
180 TIGR01186 proV glycine betaine 100.0 3.1E-42 6.8E-47 401.8 23.2 215 443-664 6-230 (363)
181 TIGR03265 PhnT2 putative 2-ami 100.0 5.3E-42 1.1E-46 401.2 25.1 217 427-655 4-226 (353)
182 PRK11153 metN DL-methionine tr 100.0 4.7E-42 1E-46 402.0 24.3 223 1083-1317 2-238 (343)
183 PRK11650 ugpC glycerol-3-phosp 100.0 7.3E-42 1.6E-46 400.4 26.0 219 1082-1316 3-231 (356)
184 PRK13637 cbiO cobalt transport 100.0 6.4E-42 1.4E-46 392.4 24.3 218 1083-1309 3-235 (287)
185 PRK13650 cbiO cobalt transport 100.0 9.9E-42 2.1E-46 389.5 25.3 221 427-654 4-230 (279)
186 PRK14269 phosphate ABC transpo 100.0 1.1E-41 2.4E-46 383.1 25.3 218 427-654 2-231 (246)
187 cd03260 ABC_PstB_phosphate_tra 100.0 5.1E-42 1.1E-46 381.5 22.3 210 428-651 1-227 (227)
188 TIGR03265 PhnT2 putative 2-ami 100.0 6E-42 1.3E-46 400.7 23.9 218 1082-1316 4-231 (353)
189 PRK13643 cbiO cobalt transport 100.0 1.1E-41 2.3E-46 390.7 25.0 221 427-654 1-234 (288)
190 PRK13647 cbiO cobalt transport 100.0 9.8E-42 2.1E-46 388.5 24.4 213 1082-1307 4-226 (274)
191 PRK13637 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 388.8 25.9 220 428-654 3-235 (287)
192 PRK09452 potA putrescine/sperm 100.0 1.6E-41 3.4E-46 398.8 25.9 214 426-655 13-236 (375)
193 TIGR01186 proV glycine betaine 100.0 7.7E-42 1.7E-46 398.5 23.0 207 1098-1316 6-226 (363)
194 cd03219 ABC_Mj1267_LivG_branch 100.0 9.6E-42 2.1E-46 381.7 22.9 222 428-654 1-233 (236)
195 PRK14273 phosphate ABC transpo 100.0 1.9E-41 4.2E-46 383.2 25.6 224 1082-1316 7-245 (254)
196 PRK13643 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 390.0 24.4 216 1083-1309 2-234 (288)
197 cd03219 ABC_Mj1267_LivG_branch 100.0 6.3E-42 1.4E-46 383.2 21.3 217 1083-1309 1-233 (236)
198 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-41 4E-46 381.7 25.0 222 1083-1315 2-238 (247)
199 PRK14242 phosphate transporter 100.0 1.5E-41 3.3E-46 384.0 24.1 218 1082-1309 6-238 (253)
200 PRK10744 pstB phosphate transp 100.0 2.5E-41 5.4E-46 383.2 25.8 220 1080-1309 11-245 (260)
201 PRK14250 phosphate ABC transpo 100.0 3E-41 6.5E-46 378.1 26.1 216 427-654 3-222 (241)
202 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-41 2.5E-46 381.4 22.8 211 1083-1309 3-227 (239)
203 PRK13642 cbiO cobalt transport 100.0 2.1E-41 4.5E-46 386.7 25.2 217 1082-1309 4-230 (277)
204 TIGR03258 PhnT 2-aminoethylpho 100.0 2E-41 4.4E-46 396.5 25.3 219 425-655 3-230 (362)
205 PRK13646 cbiO cobalt transport 100.0 1.3E-41 2.8E-46 390.0 23.1 220 1083-1309 3-236 (286)
206 PRK13635 cbiO cobalt transport 100.0 1.7E-41 3.6E-46 387.3 23.8 216 1082-1309 5-230 (279)
207 cd03256 ABC_PhnC_transporter A 100.0 1.5E-41 3.4E-46 381.5 23.2 212 1083-1307 1-233 (241)
208 cd03263 ABC_subfamily_A The AB 100.0 1.3E-41 2.7E-46 376.5 22.1 211 1083-1306 1-219 (220)
209 PRK10851 sulfate/thiosulfate t 100.0 2.4E-41 5.1E-46 395.7 25.6 217 427-655 2-228 (353)
210 PRK09536 btuD corrinoid ABC tr 100.0 1.9E-41 4.1E-46 399.9 24.8 222 1082-1320 3-237 (402)
211 PRK13646 cbiO cobalt transport 100.0 2.4E-41 5.3E-46 387.7 24.8 220 428-654 3-236 (286)
212 PRK14273 phosphate ABC transpo 100.0 3.3E-41 7.2E-46 381.3 25.5 220 426-655 6-240 (254)
213 cd03296 ABC_CysA_sulfate_impor 100.0 2.4E-41 5.2E-46 378.8 24.1 216 427-654 2-227 (239)
214 PRK10744 pstB phosphate transp 100.0 4.9E-41 1.1E-45 380.8 26.6 220 425-654 11-245 (260)
215 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.4E-40 3.1E-45 377.6 30.0 220 1079-1319 36-256 (282)
216 cd03258 ABC_MetN_methionine_tr 100.0 2.2E-41 4.8E-46 377.9 23.1 216 1083-1309 2-231 (233)
217 TIGR00960 3a0501s02 Type II (G 100.0 1.1E-41 2.4E-46 375.8 20.3 203 1083-1297 2-216 (216)
218 PRK13647 cbiO cobalt transport 100.0 3.1E-41 6.8E-46 384.4 24.6 212 427-651 4-225 (274)
219 PRK10851 sulfate/thiosulfate t 100.0 2.4E-41 5.3E-46 395.6 24.3 217 1082-1315 2-232 (353)
220 PRK14267 phosphate ABC transpo 100.0 2.3E-41 4.9E-46 382.5 23.3 218 1082-1309 4-238 (253)
221 TIGR00972 3a0107s01c2 phosphat 100.0 3.9E-41 8.4E-46 379.1 25.1 218 427-654 1-233 (247)
222 PRK14242 phosphate transporter 100.0 3.2E-41 7E-46 381.3 24.4 218 427-654 6-238 (253)
223 cd03250 ABCC_MRP_domain1 Domai 100.0 3.9E-41 8.6E-46 367.8 24.2 200 1083-1296 1-204 (204)
224 TIGR02315 ABC_phnC phosphonate 100.0 2.5E-41 5.5E-46 380.1 23.3 212 1083-1307 2-234 (243)
225 TIGR03258 PhnT 2-aminoethylpho 100.0 2.4E-41 5.3E-46 395.9 23.8 219 1080-1315 3-234 (362)
226 PRK13634 cbiO cobalt transport 100.0 3.4E-41 7.4E-46 386.9 24.5 220 428-654 3-236 (290)
227 cd03224 ABC_TM1139_LivF_branch 100.0 2.4E-41 5.1E-46 375.1 22.1 217 1083-1308 1-221 (222)
228 PRK09452 potA putrescine/sperm 100.0 4.4E-41 9.4E-46 395.0 25.5 217 1082-1315 14-240 (375)
229 PRK13634 cbiO cobalt transport 100.0 2.5E-41 5.4E-46 388.1 22.9 217 1083-1309 3-236 (290)
230 PRK14235 phosphate transporter 100.0 4.2E-41 9E-46 382.4 24.5 221 1079-1309 16-252 (267)
231 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.2E-41 4.8E-46 384.8 22.2 219 1084-1317 26-258 (269)
232 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.4E-41 9.4E-46 377.5 24.2 218 428-654 1-226 (242)
233 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.3E-41 7.2E-46 376.9 23.2 216 1083-1309 2-222 (236)
234 PRK15079 oligopeptide ABC tran 100.0 7E-41 1.5E-45 388.8 26.6 232 426-664 7-262 (331)
235 cd03259 ABC_Carb_Solutes_like 100.0 1.5E-41 3.4E-46 373.8 20.0 203 1083-1301 1-213 (213)
236 PRK13636 cbiO cobalt transport 100.0 3.8E-41 8.3E-46 385.5 24.0 215 1082-1309 5-232 (283)
237 PRK15079 oligopeptide ABC tran 100.0 4.1E-41 8.8E-46 390.8 24.5 226 1082-1318 8-260 (331)
238 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.7E-41 1.9E-45 366.0 25.7 203 426-648 5-207 (207)
239 cd03256 ABC_PhnC_transporter A 100.0 3.9E-41 8.4E-46 378.2 23.5 221 428-652 1-233 (241)
240 PRK13651 cobalt transporter AT 100.0 4.7E-41 1E-45 386.7 24.7 221 427-654 2-255 (305)
241 PRK09536 btuD corrinoid ABC tr 100.0 5.8E-41 1.3E-45 395.7 26.0 214 427-654 3-229 (402)
242 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.5E-41 7.7E-46 378.2 22.9 216 1083-1309 1-226 (242)
243 PRK14247 phosphate ABC transpo 100.0 4.4E-41 9.4E-46 379.5 23.6 226 1082-1318 3-243 (250)
244 COG4175 ProV ABC-type proline/ 100.0 1.8E-41 4E-46 363.7 19.3 229 427-666 4-267 (386)
245 PRK13651 cobalt transporter AT 100.0 5E-41 1.1E-45 386.5 24.3 216 1083-1309 3-255 (305)
246 cd03224 ABC_TM1139_LivF_branch 100.0 4.1E-41 8.9E-46 373.1 22.8 216 428-652 1-220 (222)
247 TIGR02315 ABC_phnC phosphonate 100.0 4.6E-41 1E-45 378.0 23.5 221 427-651 1-233 (243)
248 PRK11607 potG putrescine trans 100.0 8.4E-41 1.8E-45 393.4 26.6 219 425-655 17-241 (377)
249 PRK13633 cobalt transporter AT 100.0 4.9E-41 1.1E-45 384.3 23.9 217 1082-1309 4-234 (280)
250 cd03258 ABC_MetN_methionine_tr 100.0 4.4E-41 9.5E-46 375.5 22.9 220 427-653 1-230 (233)
251 PRK14235 phosphate transporter 100.0 8.2E-41 1.8E-45 380.0 25.4 220 425-654 17-252 (267)
252 PRK11000 maltose/maltodextrin 100.0 6.3E-41 1.4E-45 395.4 25.3 217 427-655 3-225 (369)
253 PRK13537 nodulation ABC transp 100.0 5.7E-41 1.2E-45 387.0 24.3 218 426-654 6-228 (306)
254 TIGR03005 ectoine_ehuA ectoine 100.0 5.6E-41 1.2E-45 378.9 23.8 213 1083-1309 1-237 (252)
255 PRK11629 lolD lipoprotein tran 100.0 4.2E-41 9.1E-46 375.3 22.5 210 1082-1302 5-228 (233)
256 PRK14244 phosphate ABC transpo 100.0 2.9E-41 6.3E-46 381.0 21.4 223 1083-1316 6-244 (251)
257 PRK13632 cbiO cobalt transport 100.0 6.1E-41 1.3E-45 381.9 24.1 216 1082-1309 7-232 (271)
258 PRK14248 phosphate ABC transpo 100.0 6.9E-41 1.5E-45 381.3 24.4 218 1082-1309 21-253 (268)
259 cd03263 ABC_subfamily_A The AB 100.0 4.4E-41 9.5E-46 372.2 22.1 215 428-651 1-219 (220)
260 PRK11000 maltose/maltodextrin 100.0 5.8E-41 1.3E-45 395.7 24.5 217 1082-1315 3-229 (369)
261 PRK14268 phosphate ABC transpo 100.0 6.3E-41 1.4E-45 379.5 23.7 223 1082-1315 12-248 (258)
262 PRK14251 phosphate ABC transpo 100.0 5.1E-41 1.1E-45 379.2 22.9 224 1082-1316 4-242 (251)
263 COG4555 NatA ABC-type Na+ tran 100.0 1.3E-41 2.7E-46 343.4 15.7 220 427-654 1-223 (245)
264 TIGR00960 3a0501s02 Type II (G 100.0 3.7E-41 8E-46 371.6 21.0 208 427-642 1-216 (216)
265 PRK13636 cbiO cobalt transport 100.0 7.6E-41 1.6E-45 383.0 24.3 219 427-654 5-232 (283)
266 cd03264 ABC_drug_resistance_li 100.0 5.1E-41 1.1E-45 369.1 22.0 203 1083-1301 1-211 (211)
267 PRK14259 phosphate ABC transpo 100.0 9.5E-41 2.1E-45 379.6 24.9 219 1081-1309 12-254 (269)
268 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-40 2.5E-45 372.6 25.2 217 427-654 1-222 (236)
269 cd03259 ABC_Carb_Solutes_like 100.0 4.2E-41 9E-46 370.4 21.2 207 428-646 1-213 (213)
270 PRK14237 phosphate transporter 100.0 9.7E-41 2.1E-45 379.4 24.9 219 1081-1309 19-252 (267)
271 cd03266 ABC_NatA_sodium_export 100.0 6.3E-41 1.4E-45 370.4 22.5 207 1083-1301 2-218 (218)
272 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.2E-40 1.1E-44 372.9 30.5 233 399-654 15-248 (282)
273 PRK14240 phosphate transporter 100.0 1.3E-40 2.7E-45 375.8 25.3 224 1081-1315 2-240 (250)
274 PRK13652 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 381.5 24.3 214 1083-1309 4-228 (277)
275 cd03226 ABC_cobalt_CbiO_domain 100.0 3.6E-41 7.8E-46 368.4 20.2 199 1084-1298 1-205 (205)
276 PRK14239 phosphate transporter 100.0 8.6E-41 1.9E-45 377.8 23.9 218 1082-1309 5-237 (252)
277 PRK13640 cbiO cobalt transport 100.0 1.1E-40 2.4E-45 381.4 25.1 217 1081-1309 4-233 (282)
278 PRK14274 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 377.7 25.0 218 1082-1309 12-244 (259)
279 PRK14248 phosphate ABC transpo 100.0 1.8E-40 4E-45 377.8 26.4 220 426-655 20-254 (268)
280 PRK14262 phosphate ABC transpo 100.0 8.5E-41 1.8E-45 377.2 23.5 227 1082-1319 3-244 (250)
281 PRK10070 glycine betaine trans 100.0 1.2E-40 2.6E-45 392.8 25.5 231 427-664 4-265 (400)
282 cd03266 ABC_NatA_sodium_export 100.0 7.1E-41 1.5E-45 370.0 22.2 212 427-646 1-218 (218)
283 PRK11831 putative ABC transpor 100.0 8.4E-41 1.8E-45 380.3 23.5 224 1082-1320 7-244 (269)
284 PRK14236 phosphate transporter 100.0 1.3E-40 2.9E-45 379.4 25.1 220 1080-1309 23-257 (272)
285 PRK14256 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 375.9 24.8 220 1080-1309 2-237 (252)
286 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.3E-45 374.0 23.8 213 1083-1309 2-226 (240)
287 cd03265 ABC_DrrA DrrA is the A 100.0 7.6E-41 1.6E-45 370.1 22.4 209 1083-1306 1-219 (220)
288 PRK13635 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 379.5 25.4 216 427-654 5-230 (279)
289 PRK14259 phosphate ABC transpo 100.0 2.3E-40 4.9E-45 376.5 26.8 219 426-654 12-254 (269)
290 cd03218 ABC_YhbG The ABC trans 100.0 8.7E-41 1.9E-45 373.0 22.9 216 428-653 1-222 (232)
291 cd03268 ABC_BcrA_bacitracin_re 100.0 7.9E-41 1.7E-45 366.7 22.0 203 1083-1301 1-208 (208)
292 PRK13644 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 379.5 24.3 214 1083-1309 2-225 (274)
293 PRK11629 lolD lipoprotein tran 100.0 1.4E-40 3E-45 371.2 24.3 214 427-647 5-228 (233)
294 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4E-41 8.7E-46 372.0 19.8 204 1083-1297 1-218 (218)
295 PRK10619 histidine/lysine/argi 100.0 1.3E-40 2.7E-45 377.0 24.2 217 1080-1309 3-242 (257)
296 PRK10575 iron-hydroxamate tran 100.0 8.6E-41 1.9E-45 379.7 22.9 214 1082-1309 11-238 (265)
297 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-40 2.8E-45 373.3 24.0 218 427-654 1-226 (240)
298 PRK13537 nodulation ABC transp 100.0 8.5E-41 1.8E-45 385.6 23.1 214 1081-1309 6-228 (306)
299 PRK14245 phosphate ABC transpo 100.0 8.7E-41 1.9E-45 376.9 22.7 218 1082-1309 3-235 (250)
300 PRK14267 phosphate ABC transpo 100.0 1.2E-40 2.7E-45 376.5 23.9 218 427-654 4-238 (253)
301 PRK11308 dppF dipeptide transp 100.0 1.5E-40 3.3E-45 385.8 25.2 227 1082-1319 5-254 (327)
302 PRK14268 phosphate ABC transpo 100.0 1.7E-40 3.7E-45 375.9 25.1 219 426-654 11-243 (258)
303 PRK11264 putative amino-acid A 100.0 1.7E-40 3.7E-45 374.9 24.8 218 427-654 3-234 (250)
304 PRK09473 oppD oligopeptide tra 100.0 1.3E-40 2.8E-45 386.9 24.5 235 427-665 12-263 (330)
305 cd03218 ABC_YhbG The ABC trans 100.0 9.7E-41 2.1E-45 372.6 22.5 216 1083-1308 1-222 (232)
306 PRK11264 putative amino-acid A 100.0 2.4E-40 5.2E-45 373.7 25.8 213 1083-1309 4-234 (250)
307 PRK11308 dppF dipeptide transp 100.0 1.7E-40 3.7E-45 385.3 25.3 232 427-665 5-256 (327)
308 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.7E-41 1.7E-45 380.4 21.9 216 429-654 26-251 (269)
309 PRK14249 phosphate ABC transpo 100.0 2.2E-40 4.7E-45 373.9 25.4 218 1082-1309 4-236 (251)
310 PRK13642 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 379.2 24.8 217 427-654 4-230 (277)
311 COG1118 CysA ABC-type sulfate/ 100.0 4.4E-41 9.6E-46 361.4 18.6 217 1082-1315 2-233 (345)
312 TIGR03411 urea_trans_UrtD urea 100.0 1.2E-40 2.7E-45 374.1 23.1 212 1083-1308 3-231 (242)
313 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.4E-41 1.4E-45 370.4 20.4 208 428-642 1-218 (218)
314 PRK14247 phosphate ABC transpo 100.0 2.4E-40 5.2E-45 373.5 25.5 218 427-654 3-235 (250)
315 PRK14249 phosphate ABC transpo 100.0 3.2E-40 6.9E-45 372.5 26.5 220 426-655 3-237 (251)
316 PRK10070 glycine betaine trans 100.0 1.2E-40 2.6E-45 392.7 23.9 210 1099-1320 42-266 (400)
317 cd03250 ABCC_MRP_domain1 Domai 100.0 2.1E-40 4.5E-45 362.1 24.1 200 428-641 1-204 (204)
318 PRK13648 cbiO cobalt transport 100.0 1.8E-40 3.8E-45 378.0 24.3 216 1082-1309 7-232 (269)
319 PRK14254 phosphate ABC transpo 100.0 2.4E-40 5.3E-45 378.6 25.5 219 1081-1309 38-270 (285)
320 PRK11231 fecE iron-dicitrate t 100.0 1.3E-40 2.7E-45 376.6 22.9 221 1083-1320 3-236 (255)
321 cd03247 ABCC_cytochrome_bd The 100.0 1E-40 2.2E-45 356.0 20.9 178 1083-1301 1-178 (178)
322 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-40 2.9E-45 389.5 23.7 206 443-655 37-256 (382)
323 PRK14261 phosphate ABC transpo 100.0 2E-40 4.3E-45 374.7 24.4 228 1082-1320 6-248 (253)
324 TIGR02769 nickel_nikE nickel i 100.0 1.7E-40 3.8E-45 377.2 23.9 229 427-663 2-249 (265)
325 PRK13644 cbiO cobalt transport 100.0 2.3E-40 5E-45 377.2 25.0 219 427-654 1-225 (274)
326 PRK14274 phosphate ABC transpo 100.0 2.8E-40 6E-45 374.7 25.5 218 427-654 12-244 (259)
327 PRK14240 phosphate transporter 100.0 2.5E-40 5.5E-45 373.3 25.1 219 426-654 2-235 (250)
328 PRK11614 livF leucine/isoleuci 100.0 1.2E-40 2.6E-45 372.8 22.3 219 1082-1309 5-227 (237)
329 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-40 2.6E-45 369.1 22.0 205 1083-1298 2-220 (221)
330 PRK11607 potG putrescine trans 100.0 1.7E-40 3.6E-45 390.9 24.5 219 1081-1316 18-246 (377)
331 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-41 1.3E-45 373.6 19.7 212 1083-1307 1-220 (230)
332 cd03301 ABC_MalK_N The N-termi 100.0 9.6E-41 2.1E-45 367.6 20.9 203 1083-1301 1-213 (213)
333 PRK11831 putative ABC transpor 100.0 1.9E-40 4.1E-45 377.4 24.0 218 427-654 7-234 (269)
334 PRK14238 phosphate transporter 100.0 3.2E-40 6.9E-45 375.7 25.8 221 427-655 24-257 (271)
335 TIGR03005 ectoine_ehuA ectoine 100.0 2.3E-40 5E-45 373.9 24.3 218 428-655 1-238 (252)
336 PRK13632 cbiO cobalt transport 100.0 2.5E-40 5.4E-45 376.9 24.5 220 427-654 7-232 (271)
337 PRK14238 phosphate transporter 100.0 2.6E-40 5.7E-45 376.4 24.6 218 1082-1309 24-256 (271)
338 PRK11022 dppD dipeptide transp 100.0 2.2E-40 4.8E-45 384.7 24.4 231 427-664 3-254 (326)
339 PRK10619 histidine/lysine/argi 100.0 2.5E-40 5.4E-45 374.6 24.2 219 426-654 4-242 (257)
340 PRK11022 dppD dipeptide transp 100.0 1.8E-40 3.9E-45 385.4 23.4 229 1082-1319 3-253 (326)
341 PRK14260 phosphate ABC transpo 100.0 2.1E-40 4.6E-45 375.4 23.5 219 1081-1309 6-244 (259)
342 PRK09473 oppD oligopeptide tra 100.0 2.7E-40 6E-45 384.1 25.0 229 1082-1319 12-261 (330)
343 PRK11614 livF leucine/isoleuci 100.0 2.5E-40 5.5E-45 370.2 23.7 218 427-653 5-226 (237)
344 PRK13641 cbiO cobalt transport 100.0 3.3E-40 7E-45 378.6 25.1 221 427-654 2-235 (287)
345 cd03265 ABC_DrrA DrrA is the A 100.0 1.7E-40 3.8E-45 367.2 22.1 213 428-651 1-219 (220)
346 cd03293 ABC_NrtD_SsuB_transpor 100.0 9.4E-41 2E-45 369.3 19.8 205 1083-1303 1-218 (220)
347 PRK13645 cbiO cobalt transport 100.0 2.9E-40 6.4E-45 379.9 24.7 223 425-654 4-241 (289)
348 TIGR02211 LolD_lipo_ex lipopro 100.0 2.1E-40 4.4E-45 367.2 22.5 209 428-643 2-220 (221)
349 PRK13652 cbiO cobalt transport 100.0 3.4E-40 7.3E-45 376.8 24.9 219 427-654 3-228 (277)
350 cd03226 ABC_cobalt_CbiO_domain 100.0 1.6E-40 3.5E-45 363.3 21.3 199 429-643 1-205 (205)
351 PRK14239 phosphate transporter 100.0 3.6E-40 7.9E-45 372.7 24.9 218 427-654 5-237 (252)
352 PRK13649 cbiO cobalt transport 100.0 3.7E-40 8.1E-45 377.8 25.3 217 1083-1309 3-235 (280)
353 PRK14243 phosphate transporter 100.0 3.4E-40 7.4E-45 374.3 24.7 218 1082-1309 10-249 (264)
354 PRK14237 phosphate transporter 100.0 5.4E-40 1.2E-44 373.3 26.3 220 425-654 18-252 (267)
355 PRK14245 phosphate ABC transpo 100.0 4.1E-40 8.9E-45 371.4 25.2 218 427-654 3-235 (250)
356 PRK14256 phosphate ABC transpo 100.0 4.9E-40 1.1E-44 371.3 25.8 228 425-662 2-245 (252)
357 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-40 5.4E-45 382.6 23.8 217 427-654 4-225 (303)
358 PRK14266 phosphate ABC transpo 100.0 3.7E-40 8E-45 372.0 24.6 224 1082-1316 3-241 (250)
359 PRK11247 ssuB aliphatic sulfon 100.0 2.8E-40 6.1E-45 371.6 23.5 204 1082-1304 12-219 (257)
360 PRK13648 cbiO cobalt transport 100.0 4.3E-40 9.4E-45 374.8 25.3 220 427-654 7-232 (269)
361 PRK14270 phosphate ABC transpo 100.0 3.2E-40 6.9E-45 372.6 24.0 218 1082-1309 4-236 (251)
362 TIGR02769 nickel_nikE nickel i 100.0 3.5E-40 7.5E-45 374.7 24.4 217 1083-1309 3-241 (265)
363 PRK13640 cbiO cobalt transport 100.0 4E-40 8.6E-45 376.9 25.1 221 426-654 4-233 (282)
364 TIGR03415 ABC_choXWV_ATP choli 100.0 1.6E-40 3.4E-45 388.8 22.2 208 1099-1318 38-263 (382)
365 TIGR02673 FtsE cell division A 100.0 1.4E-40 3E-45 366.6 20.6 201 1083-1296 2-214 (214)
366 TIGR03411 urea_trans_UrtD urea 100.0 3.6E-40 7.8E-45 370.4 24.2 222 427-653 2-231 (242)
367 cd03264 ABC_drug_resistance_li 100.0 1.4E-40 3E-45 365.6 20.3 203 428-646 1-211 (211)
368 PRK14236 phosphate transporter 100.0 5.2E-40 1.1E-44 374.4 25.8 221 424-654 22-257 (272)
369 cd03290 ABCC_SUR1_N The SUR do 100.0 4.4E-40 9.5E-45 363.4 24.3 210 1084-1296 2-218 (218)
370 PRK13536 nodulation factor exp 100.0 3.1E-40 6.7E-45 384.3 24.2 218 426-654 40-262 (340)
371 PRK13641 cbiO cobalt transport 100.0 3.2E-40 6.9E-45 378.6 24.0 218 1082-1309 2-235 (287)
372 PRK11124 artP arginine transpo 100.0 2.6E-40 5.6E-45 371.4 22.7 213 1083-1309 3-231 (242)
373 PRK13649 cbiO cobalt transport 100.0 3.9E-40 8.4E-45 377.7 24.6 220 428-654 3-235 (280)
374 PRK15112 antimicrobial peptide 100.0 4.1E-40 9E-45 374.2 24.6 229 1082-1321 4-252 (267)
375 PRK13645 cbiO cobalt transport 100.0 3.1E-40 6.7E-45 379.7 23.9 220 1080-1309 4-241 (289)
376 TIGR03410 urea_trans_UrtE urea 100.0 2.7E-40 5.9E-45 368.4 22.6 215 428-652 1-220 (230)
377 PRK13638 cbiO cobalt transport 100.0 2.8E-40 6.1E-45 376.7 23.2 213 1083-1309 2-226 (271)
378 PRK11231 fecE iron-dicitrate t 100.0 4.1E-40 8.8E-45 372.4 24.2 213 427-653 2-227 (255)
379 cd03268 ABC_BcrA_bacitracin_re 100.0 2.3E-40 5E-45 363.1 21.5 203 428-646 1-208 (208)
380 PRK14243 phosphate transporter 100.0 8.4E-40 1.8E-44 371.1 26.8 218 427-654 10-249 (264)
381 PRK14271 phosphate ABC transpo 100.0 5.3E-40 1.2E-44 374.3 25.2 218 1082-1309 21-252 (276)
382 cd03292 ABC_FtsE_transporter F 100.0 2.1E-40 4.5E-45 365.3 21.1 202 1083-1297 1-214 (214)
383 PRK10895 lipopolysaccharide AB 100.0 3.9E-40 8.4E-45 369.7 23.6 217 427-653 3-226 (241)
384 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-40 4.8E-45 369.1 21.5 211 1083-1309 1-221 (232)
385 PRK13633 cobalt transporter AT 100.0 5E-40 1.1E-44 376.0 24.8 222 426-654 3-234 (280)
386 TIGR00968 3a0106s01 sulfate AB 100.0 4.5E-40 9.7E-45 367.7 23.9 211 1083-1309 1-221 (237)
387 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-40 4.2E-45 364.6 20.5 201 1084-1296 1-211 (211)
388 cd03235 ABC_Metallic_Cations A 100.0 1.5E-40 3.2E-45 366.0 19.5 198 1084-1301 1-213 (213)
389 PRK10575 iron-hydroxamate tran 100.0 4.4E-40 9.4E-45 373.9 23.9 213 427-653 11-237 (265)
390 PRK14241 phosphate transporter 100.0 4.4E-40 9.5E-45 372.8 23.7 218 1082-1309 4-243 (258)
391 PRK14244 phosphate ABC transpo 100.0 2.9E-40 6.3E-45 372.9 22.0 217 428-654 6-238 (251)
392 PRK14253 phosphate ABC transpo 100.0 4.8E-40 1E-44 370.9 23.7 218 1082-1309 3-234 (249)
393 PRK13548 hmuV hemin importer A 100.0 6.7E-40 1.5E-44 370.6 24.9 213 1083-1309 3-231 (258)
394 cd03247 ABCC_cytochrome_bd The 100.0 3.7E-40 8E-45 351.8 21.6 178 428-646 1-178 (178)
395 PRK14252 phosphate ABC transpo 100.0 6.3E-40 1.4E-44 372.8 24.8 221 1079-1309 13-250 (265)
396 cd03257 ABC_NikE_OppD_transpor 100.0 4E-40 8.6E-45 366.9 22.7 214 427-646 1-228 (228)
397 PRK14270 phosphate ABC transpo 100.0 8.1E-40 1.8E-44 369.3 25.5 218 427-654 4-236 (251)
398 PRK13638 cbiO cobalt transport 100.0 5.3E-40 1.2E-44 374.4 24.2 218 427-654 1-226 (271)
399 PRK14261 phosphate ABC transpo 100.0 7E-40 1.5E-44 370.2 25.0 218 427-654 6-238 (253)
400 PRK14271 phosphate ABC transpo 100.0 8.2E-40 1.8E-44 372.8 25.6 220 427-654 21-252 (276)
401 TIGR01288 nodI ATP-binding ABC 100.0 4.4E-40 9.5E-45 380.5 23.4 213 1082-1309 4-225 (303)
402 PRK10895 lipopolysaccharide AB 100.0 3.6E-40 7.8E-45 370.0 21.9 218 1082-1309 3-227 (241)
403 PRK14251 phosphate ABC transpo 100.0 9.3E-40 2E-44 369.0 25.4 218 427-654 4-236 (251)
404 PRK11247 ssuB aliphatic sulfon 100.0 6.4E-40 1.4E-44 368.7 23.9 204 427-649 12-219 (257)
405 PRK13639 cbiO cobalt transport 100.0 3.8E-40 8.3E-45 375.9 22.4 214 1083-1309 2-227 (275)
406 cd03301 ABC_MalK_N The N-termi 100.0 3.7E-40 8E-45 362.9 21.5 207 428-646 1-213 (213)
407 PRK11300 livG leucine/isoleuci 100.0 7.4E-40 1.6E-44 370.8 24.5 223 427-654 5-244 (255)
408 PRK14258 phosphate ABC transpo 100.0 5.9E-40 1.3E-44 371.9 23.7 219 1081-1309 6-246 (261)
409 PRK10253 iron-enterobactin tra 100.0 6.5E-40 1.4E-44 372.5 24.1 215 1081-1309 6-234 (265)
410 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.3E-40 7.1E-45 365.0 21.0 209 428-648 1-218 (220)
411 COG0410 LivF ABC-type branched 100.0 7.3E-40 1.6E-44 341.9 22.3 220 427-654 3-227 (237)
412 PRK14275 phosphate ABC transpo 100.0 6.3E-40 1.4E-44 375.7 24.0 225 1082-1317 39-278 (286)
413 PRK11300 livG leucine/isoleuci 100.0 5.1E-40 1.1E-44 372.1 22.8 221 1082-1309 5-244 (255)
414 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.2E-40 1.3E-44 360.5 22.7 201 1083-1301 1-211 (211)
415 PRK14263 phosphate ABC transpo 100.0 8.5E-40 1.8E-44 369.8 24.5 218 1082-1309 8-246 (261)
416 PRK10584 putative ABC transpor 100.0 5.8E-40 1.3E-44 365.2 22.8 208 1082-1300 6-227 (228)
417 PRK13548 hmuV hemin importer A 100.0 1.1E-39 2.3E-44 368.9 25.3 217 427-653 2-230 (258)
418 TIGR03873 F420-0_ABC_ATP propo 100.0 5.6E-40 1.2E-44 371.5 23.0 212 1083-1308 2-226 (256)
419 PRK13639 cbiO cobalt transport 100.0 7.7E-40 1.7E-44 373.4 24.1 219 427-654 1-227 (275)
420 PRK10247 putative ABC transpor 100.0 6.2E-40 1.3E-44 363.5 22.7 213 427-649 7-223 (225)
421 PRK14253 phosphate ABC transpo 100.0 1.1E-39 2.5E-44 367.8 25.2 218 427-654 3-234 (249)
422 TIGR03522 GldA_ABC_ATP gliding 100.0 5.4E-40 1.2E-44 379.0 23.0 212 1083-1309 3-222 (301)
423 PRK14272 phosphate ABC transpo 100.0 8.6E-40 1.9E-44 369.6 24.1 225 1082-1317 4-244 (252)
424 PRK10771 thiQ thiamine transpo 100.0 1E-39 2.2E-44 363.9 24.4 209 1083-1309 2-220 (232)
425 cd03225 ABC_cobalt_CbiO_domain 100.0 3.9E-40 8.5E-45 362.2 20.7 205 429-641 1-211 (211)
426 cd03257 ABC_NikE_OppD_transpor 100.0 9.9E-40 2.1E-44 363.7 24.1 212 1083-1301 2-228 (228)
427 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-40 1.5E-44 378.2 23.6 217 427-654 2-222 (301)
428 PRK10908 cell division protein 100.0 7.2E-40 1.6E-44 362.8 22.7 204 1083-1299 2-217 (222)
429 PRK14254 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 371.9 26.1 220 425-654 37-270 (285)
430 PRK10247 putative ABC transpor 100.0 6.1E-40 1.3E-44 363.6 22.1 210 1082-1304 7-223 (225)
431 PRK14272 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 368.4 24.9 220 427-654 4-237 (252)
432 PRK11124 artP arginine transpo 100.0 8.2E-40 1.8E-44 367.3 23.3 217 427-653 2-230 (242)
433 PRK14260 phosphate ABC transpo 100.0 1E-39 2.3E-44 369.7 24.3 219 426-654 6-244 (259)
434 cd03246 ABCC_Protease_Secretio 100.0 6.3E-40 1.4E-44 348.1 21.0 172 1083-1297 1-173 (173)
435 PRK14252 phosphate ABC transpo 100.0 1.5E-39 3.2E-44 369.8 25.4 221 424-654 13-250 (265)
436 PRK13536 nodulation factor exp 100.0 6.1E-40 1.3E-44 381.9 22.6 213 1082-1309 41-262 (340)
437 cd03290 ABCC_SUR1_N The SUR do 100.0 1.4E-39 3.1E-44 359.3 24.4 210 429-641 2-218 (218)
438 PRK10253 iron-enterobactin tra 100.0 1.2E-39 2.7E-44 370.2 24.6 214 426-653 6-233 (265)
439 PRK14255 phosphate ABC transpo 100.0 8.7E-40 1.9E-44 369.4 23.1 223 1082-1315 5-242 (252)
440 PRK11144 modC molybdate transp 100.0 1E-39 2.2E-44 383.7 24.5 212 427-655 1-220 (352)
441 PRK14262 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 367.4 24.5 218 427-654 3-235 (250)
442 TIGR02673 FtsE cell division A 100.0 6.3E-40 1.4E-44 361.4 21.3 202 427-641 1-214 (214)
443 PRK15093 antimicrobial peptide 100.0 1.1E-39 2.4E-44 380.3 24.4 228 1083-1319 4-258 (330)
444 cd03299 ABC_ModC_like Archeal 100.0 1.2E-39 2.7E-44 363.6 23.7 210 1083-1309 1-220 (235)
445 PRK11701 phnK phosphonate C-P 100.0 2.3E-39 5.1E-44 366.9 26.3 227 1082-1319 6-251 (258)
446 PRK15112 antimicrobial peptide 100.0 1.4E-39 3.1E-44 369.8 24.6 232 427-665 4-251 (267)
447 PRK14275 phosphate ABC transpo 100.0 1.9E-39 4.1E-44 371.8 25.7 219 426-654 38-271 (286)
448 cd03269 ABC_putative_ATPase Th 100.0 6E-40 1.3E-44 360.3 20.7 201 1083-1301 1-210 (210)
449 cd03292 ABC_FtsE_transporter F 100.0 7.2E-40 1.6E-44 361.0 21.3 206 428-642 1-214 (214)
450 PRK10908 cell division protein 100.0 1.3E-39 2.8E-44 360.7 23.2 209 427-644 1-217 (222)
451 PRK14264 phosphate ABC transpo 100.0 1.7E-39 3.6E-44 375.3 24.8 219 1081-1309 44-290 (305)
452 PRK14246 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 366.6 24.3 227 1082-1319 10-251 (257)
453 PRK14241 phosphate transporter 100.0 1.9E-39 4.1E-44 367.6 24.7 218 427-654 4-243 (258)
454 cd03246 ABCC_Protease_Secretio 100.0 1.2E-39 2.6E-44 346.0 21.5 172 428-642 1-173 (173)
455 cd03262 ABC_HisP_GlnQ_permease 100.0 5.9E-40 1.3E-44 361.4 20.0 201 1083-1297 1-213 (213)
456 PRK11701 phnK phosphonate C-P 100.0 2.5E-39 5.4E-44 366.7 25.6 218 427-654 6-242 (258)
457 PRK15093 antimicrobial peptide 100.0 1.7E-39 3.8E-44 378.7 25.0 228 427-662 3-256 (330)
458 PRK14265 phosphate ABC transpo 100.0 3.6E-39 7.8E-44 367.4 27.0 219 426-654 19-259 (274)
459 PRK14265 phosphate ABC transpo 100.0 2.5E-39 5.3E-44 368.8 25.6 218 1082-1309 20-259 (274)
460 PRK11144 modC molybdate transp 100.0 1.5E-39 3.1E-44 382.3 24.1 212 1083-1312 2-221 (352)
461 PRK00349 uvrA excinuclease ABC 100.0 1.5E-38 3.2E-43 405.7 35.2 108 1210-1318 818-936 (943)
462 PRK10584 putative ABC transpor 100.0 2E-39 4.4E-44 360.8 24.0 212 427-645 6-227 (228)
463 TIGR03873 F420-0_ABC_ATP propo 100.0 1.4E-39 3E-44 368.3 22.8 221 428-653 2-226 (256)
464 cd03235 ABC_Metallic_Cations A 100.0 5.8E-40 1.3E-44 361.2 19.1 202 429-646 1-213 (213)
465 COG1131 CcmA ABC-type multidru 100.0 1.2E-39 2.6E-44 372.0 22.2 214 427-654 4-227 (293)
466 cd03269 ABC_putative_ATPase Th 100.0 9.2E-40 2E-44 358.8 20.1 205 428-646 1-210 (210)
467 PRK13547 hmuV hemin importer A 100.0 2.4E-39 5.1E-44 367.2 24.0 213 1083-1309 2-245 (272)
468 PRK13547 hmuV hemin importer A 100.0 2E-39 4.3E-44 367.8 23.4 222 427-653 1-244 (272)
469 COG1137 YhbG ABC-type (unclass 100.0 1.6E-40 3.5E-45 335.0 12.5 223 426-654 3-229 (243)
470 PRK10418 nikD nickel transport 100.0 2.7E-39 6E-44 365.2 24.0 225 1082-1321 4-243 (254)
471 PRK14258 phosphate ABC transpo 100.0 3.7E-39 8E-44 365.5 24.9 219 426-654 6-246 (261)
472 TIGR01978 sufC FeS assembly AT 100.0 1.6E-39 3.5E-44 365.6 21.8 212 1083-1307 1-233 (243)
473 PRK14264 phosphate ABC transpo 100.0 3.4E-39 7.4E-44 372.7 25.0 219 426-654 44-290 (305)
474 TIGR01277 thiQ thiamine ABC tr 100.0 2.8E-39 6E-44 355.6 23.0 202 1083-1302 1-212 (213)
475 cd03262 ABC_HisP_GlnQ_permease 100.0 1.2E-39 2.6E-44 359.1 20.0 205 428-642 1-213 (213)
476 cd03234 ABCG_White The White s 100.0 1.1E-39 2.3E-44 362.3 19.8 214 1083-1301 4-226 (226)
477 PRK14266 phosphate ABC transpo 100.0 4.8E-39 1E-43 362.9 25.3 218 427-654 3-235 (250)
478 TIGR01188 drrA daunorubicin re 100.0 1.3E-39 2.7E-44 376.5 20.9 200 1098-1309 6-214 (302)
479 PRK14263 phosphate ABC transpo 100.0 4.6E-39 1E-43 363.9 25.0 218 427-654 8-246 (261)
480 COG1123 ATPase components of v 100.0 2.5E-39 5.5E-44 381.1 23.6 233 426-663 279-529 (539)
481 COG0411 LivG ABC-type branched 100.0 8.8E-40 1.9E-44 343.9 17.6 221 427-654 4-240 (250)
482 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-39 8.2E-44 354.2 23.4 201 428-646 1-211 (211)
483 TIGR01188 drrA daunorubicin re 100.0 1.7E-39 3.8E-44 375.3 21.7 204 443-654 6-214 (302)
484 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-39 8.3E-44 359.1 23.4 215 428-654 1-221 (232)
485 TIGR00968 3a0106s01 sulfate AB 100.0 4.6E-39 1E-43 359.5 24.0 215 428-654 1-221 (237)
486 PRK09984 phosphonate/organopho 100.0 4.7E-39 1E-43 365.3 24.4 220 427-651 4-240 (262)
487 COG1131 CcmA ABC-type multidru 100.0 2.2E-39 4.8E-44 369.9 21.7 214 1082-1309 4-227 (293)
488 PRK10771 thiQ thiamine transpo 100.0 6.9E-39 1.5E-43 357.2 25.1 210 427-654 1-220 (232)
489 cd03234 ABCG_White The White s 100.0 2.4E-39 5.3E-44 359.4 21.0 215 427-646 3-226 (226)
490 PRK14255 phosphate ABC transpo 100.0 5.8E-39 1.3E-43 362.7 24.4 218 427-654 5-237 (252)
491 PRK10419 nikE nickel transport 100.0 3.4E-39 7.3E-44 366.7 22.6 229 1083-1320 4-251 (268)
492 PRK09984 phosphonate/organopho 100.0 5.7E-39 1.2E-43 364.6 24.4 222 1082-1321 4-251 (262)
493 COG0444 DppD ABC-type dipeptid 100.0 4.6E-39 1E-43 353.8 22.3 234 428-666 2-256 (316)
494 TIGR01978 sufC FeS assembly AT 100.0 4.8E-39 1E-43 361.7 22.7 215 428-652 1-233 (243)
495 TIGR02142 modC_ABC molybdenum 100.0 5.2E-39 1.1E-43 378.3 23.3 213 1087-1316 4-228 (354)
496 COG4598 HisP ABC-type histidin 100.0 1.7E-39 3.6E-44 320.5 15.8 226 427-663 6-251 (256)
497 PRK11248 tauB taurine transpor 100.0 6.5E-39 1.4E-43 361.4 22.8 207 427-648 1-215 (255)
498 PRK11248 tauB taurine transpor 100.0 4.7E-39 1E-43 362.5 21.7 202 1083-1303 2-215 (255)
499 COG0410 LivF ABC-type branched 100.0 7.1E-39 1.5E-43 334.5 21.2 220 1082-1309 3-227 (237)
500 PRK10419 nikE nickel transport 100.0 8.5E-39 1.8E-43 363.4 23.6 224 427-654 3-242 (268)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-220 Score=2027.42 Aligned_cols=1216 Identities=52% Similarity=0.858 Sum_probs=1118.6
Q ss_pred cchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
.+++..+++|..+.++.++++|++++++.+...|++..+++++++.+..... . ...+.+..+++++++++++.++..|
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~lg~~~~~~~~ 89 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN-K-IASSEVSKVALYFVYLGVGVFISGF 89 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc-h-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999998764332 1 2224667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (1350)
++..||.+.++|...++|.++++.++|++++|||.+ .+|++.+++++|++.|++.+++.++.+++.+.++++++++.|+
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 7899999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000687 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
..|+|+++++.+.|++++....+.+.+.+...+.+.+++++.+.++|++.++|||.+|+.|+++.++|.+.++...+.+.
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+.+.+.++..++..++.++++++.+|||+.++.++..++|.++.+++++++....+++..+.+..+.++++|+.+|++.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000687 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+..|+++.....+......+|.|+|+||+|+||++|+.++|+|+||+|++|+++||||||||||||++++|.|||+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 99988766443333445678999999999999999989999999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCC
Q 000687 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~ 565 (1350)
+|+|||.|+++++.+|+|++||+|.|+|.||++||+|||+||+|+++.+++.+||+.+++++||..||+||+|.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
+|||||||||||||||++||+||||||||||||+++|+.+|++|++.++|||+|+|||||+++++||+|+||++|+|+|.
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~ 568 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQ 568 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccc
Q 000687 646 GTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLD 725 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1350)
|+|+||++. .|.|.+|++.|+........+..++... ....+. .... ...+..+.. .. ..... ...+
T Consensus 569 G~h~ELi~~--~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~--~~~~s~-~~s~-~~~~~~~~~-~~-----~~~~~-~~~~ 635 (1228)
T KOG0055|consen 569 GTHDELIAL--GGIYSSLVRLQELEKAAEDEEEEESLKE--ERSRSL-KSSS-SSPSLSRGS-NR-----SNLLS-VKPE 635 (1228)
T ss_pred cCHHHHHhc--cchHHHHHHHHhhhhhhhccccccchhh--hhhhcc-cccc-ccccccCCc-cc-----ccccc-cccc
Confidence 999999998 5999999999876543221000000000 000000 0000 000000000 00 00000 0000
Q ss_pred cCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 000687 726 ATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYL 805 (1350)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1350)
.....+. ........++++++++++|+|+++++|++++++.|+..|++++.++.++..+..++++.+......|+++
T Consensus 636 ~e~~~~~---~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~ 712 (1228)
T KOG0055|consen 636 GEDPEEP---VSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALI 712 (1228)
T ss_pred ccccccc---cccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 0000000 0111256789999999999999999999999999999999999999999999877766566555669999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHH
Q 000687 806 LIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQ 885 (1350)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~ 885 (1350)
+++++++.++..++++++|.+++++++.++|.++|+++++++++|||.++|. |+|.+|+.+|..+++..+++.+..+++
T Consensus 713 f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~ 791 (1228)
T KOG0055|consen 713 FLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQ 791 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHH
Q 000687 886 NTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVG 965 (1350)
Q Consensus 886 ~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 965 (1350)
++..+++++++.|+++|+|++++++++|++++..+.+.+++.....+.++...++...+.|++++++||++|++|+++.+
T Consensus 792 ~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~ 871 (1228)
T KOG0055|consen 792 NIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFME 871 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 966 LFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDF 1045 (1350)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1350)
.|.+.++.+.+...+.+.+.++.+++++++.++.+++.+|||.+|+.+|.+++..++.+++++.+.+..+++...+.|++
T Consensus 872 ~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~ 951 (1228)
T KOG0055|consen 872 LYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDI 951 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHH
Q 000687 1046 IKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKS 1125 (1350)
Q Consensus 1046 ~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKS 1125 (1350)
.++..++.+++++++++++.++..+.+ ..+++.+|+|+|+||+|+||+||+.+||+|+||+|++||+||||||||||||
T Consensus 952 ~ka~~Aa~~iF~i~dr~~~i~~~~~~~-~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKS 1030 (1228)
T KOG0055|consen 952 SKAKIAAGSIFEILDRKPTIDPDSTSG-GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKS 1030 (1228)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCC-CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHH
Confidence 999999999999999999877654222 2234678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHh
Q 000687 1126 SVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFIS 1205 (1350)
Q Consensus 1126 TL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~ 1205 (1350)
|++.||.|||||.+|.|.|||+||+++++++||++||+|.|||.||++||||||.||.++++++||.+||+.||+|+||.
T Consensus 1031 TvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~ 1110 (1228)
T KOG0055|consen 1031 TVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFIS 1110 (1228)
T ss_pred HHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999966699999999999999999999
Q ss_pred cCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh
Q 000687 1206 SLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN 1285 (1350)
Q Consensus 1206 ~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~ 1285 (1350)
+||+||||.|||+|.+||||||||||||||++|||+||||||||||||.++|+.||++|++...|||+|+|||||+||++
T Consensus 1111 sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn 1190 (1228)
T KOG0055|consen 1111 SLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN 1190 (1228)
T ss_pred cCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhh
Q 000687 1286 AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1286 ~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
||.|+|++||+|+|+|||++|+++ +|.|++|++.|..
T Consensus 1191 aD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1191 ADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQSS 1227 (1228)
T ss_pred CCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhccC
Confidence 999999999999999999999986 8999999998863
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-174 Score=1745.06 Aligned_cols=1223 Identities=29% Similarity=0.482 Sum_probs=1021.2
Q ss_pred ccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 85 TPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASS 164 (1350)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1350)
.++++..+++|..+.++.+++++++++++.+.+.|++|++++.++|.+... . .+..+++++++++++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~----~----~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG----E----NVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----c----hHHHHHHHHHHHHHHHHHHH
Confidence 567899999999888888889999999999999999999999999976321 1 12223455666777788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 165 WAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF 244 (1350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 244 (1350)
|++.+++.++++++..++|.++|++++++|++|||.. ++|++++++++|++.+++.+...+..++..+++++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988 899999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 000687 245 SAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLG 324 (1350)
Q Consensus 245 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~ 324 (1350)
+++|+|++++++++|+++++..++.+++++..++.++..++.++.+.|+++|+++||+|+.|+.+.++|.+..+...+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHH--------FTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKV 396 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g--------~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 396 (1350)
.+.....++..++..++.++++++++|+|++++.+| .+++|.+++++++.+.....+..+.+.+..++++.+
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888999999999999999875 578898888877777666667778888899999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHH
Q 000687 397 AAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLI 476 (1350)
Q Consensus 397 s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll 476 (1350)
|++||+++++.+++++. ...+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|
T Consensus 354 a~~ri~~ii~~~~~~~~-~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVEN-NDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHHHcCCCCCCC-CCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999998776532 111122222 2479999999999865445799999999999999999999999999999999
Q ss_pred hcCCCCCCcEEEE-CCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCC--------------------------
Q 000687 477 ERFYDPTSGQVLL-DGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRP-------------------------- 529 (1350)
Q Consensus 477 ~~~~~~~~G~i~i-~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~-------------------------- 529 (1350)
+|+|+|++|+|++ ||+++++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 5799999999999999999999999999999999999742
Q ss_pred -------------------------------CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 530 -------------------------------DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 530 -------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
+.++++++++++.+++++|+.+||+||||.+|++|.+|||||||||+||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2456789999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCC----------------
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQG---------------- 640 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G---------------- 640 (1350)
|||+++|+|||||||||+||+++++.|++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999985 489999999999999999999999986
Q ss_pred -------------------------------EEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhc-ccCCCCCCcc
Q 000687 641 -------------------------------SVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNA-RKSSARPSSA 688 (1350)
Q Consensus 641 -------------------------------~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~ 688 (1350)
+|+|+|+|+||++. .+|.|+.|++.|........... ..........
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~ 750 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKN-KNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSA 750 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhc-cCCcHHHHHhhhcccccccccccccccccccccc
Confidence 59999999999973 28999999987754321110000 0000000000
Q ss_pred cCCCCCcccccC-CCCCCCCccccccCCcCCccccccccCCCchh---hhhh-hh-hhhhHHHHHHHHhcchhHHHHHHH
Q 000687 689 RNSVSSPIIARN-SSYGRSPYSRRLSDFSTSDFSLSLDATYPSYR---HEKL-AF-KEQASSFWRLAKMNSPEWVYALVG 762 (1350)
Q Consensus 689 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1350)
............ ................................ .++. .. ......+++++++.++++..++++
T Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 830 (1466)
T PTZ00265 751 YKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTII 830 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHH
Confidence 000000000000 00000000000000000000000000000000 0000 00 001113444555555666668888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 763 SVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAA 842 (1350)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 842 (1350)
++++++.+++.|+++++++.+++.++... ........|.+++++++++..++.+++.+++.+++.++..++|..+|++
T Consensus 831 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 831 ALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999998765322 1223345677778888888899999999999999999999999999999
Q ss_pred HHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 843 VLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQ 922 (1350)
Q Consensus 843 ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 922 (1350)
++++|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++.......
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998778999999999999999999999999999999999999999999999999888765554443332222
Q ss_pred HHHHhhHH-H-H-------------HHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 923 KMFMKGFS-G-D-------------MEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 923 ~~~~~~~~-~-~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
.+...... + . .++........+.|++.|++|||+|+.|+++.++|.+..+...+...+...+.+.
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111100 0 0 1223456678999999999999999999999999999999998888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
..++++++.++..++++|+|++++..|.++++.++.++.++.+...++..+....+++.++..+++|++++++.+++.+.
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~ 1148 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDV 1148 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCC
Confidence 99999999999999999999999999999999998887777666667788889999999999999999999988764322
Q ss_pred CCCCCCC--CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC--------
Q 000687 1068 DDPDATP--VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-------- 1137 (1350)
Q Consensus 1068 ~~~~~~~--~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-------- 1137 (1350)
.+..... .++...|.|+|+||+|+||++|+.+||+|+||+|+|||+|||||+||||||||+++|+|||+|
T Consensus 1149 ~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~ 1228 (1466)
T PTZ00265 1149 RDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVF 1228 (1466)
T ss_pred CCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccc
Confidence 1111111 012346889999999999977667899999999999999999999999999999999999999
Q ss_pred ----------------------------------------------CccEEEECCccCCCCChHHhhcccEEEccCCCCC
Q 000687 1138 ----------------------------------------------SSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLF 1171 (1350)
Q Consensus 1138 ----------------------------------------------~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF 1171 (1350)
++|+|+|||+|++++++++||++|+||||||+||
T Consensus 1229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF 1308 (1466)
T PTZ00265 1229 KNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF 1308 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc
Confidence 6999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCC
Q 000687 1172 ASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSA 1251 (1350)
Q Consensus 1172 ~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSa 1251 (1350)
+|||||||.+|.++++|+|+++||+.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+
T Consensus 1309 ~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSa 1388 (1466)
T PTZ00265 1309 NMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSS 1388 (1466)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeC----CEE-eeecChhHHhhcCCCchhHHHHHhh
Q 000687 1252 LDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDD----GKV-AELGSHSHLLKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1252 LD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~----G~I-vE~Gt~~eLl~~~~~g~y~~l~~~q 1322 (1350)
||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|+|+|+||+++ .+|.|++||+.|
T Consensus 1389 LD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~-~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1389 LDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV-QDGVYKKYVKLA 1465 (1466)
T ss_pred cCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc-CCChHHHHHhhc
Confidence 99999999999999874 69999999999999999999999999 995 499999999974 279999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-167 Score=1589.35 Aligned_cols=1095 Identities=23% Similarity=0.323 Sum_probs=863.7
Q ss_pred HHHHHHHHHHHHHH----HHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 172 MWTGERQSIKMRIK----YLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 172 ~~~~~~~~~~lR~~----~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 247 (1350)
.+...++..++|.. +|+|.++++-.--... ++|+++|.+++|++++.++. .+++.+|..+..++++.++-
T Consensus 263 ~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~-t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~lL 336 (1381)
T KOG0054|consen 263 FFVSFRVGMRLRSALISAIYRKALRLSNSARGET-TVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYLL 336 (1381)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCC-CcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 35566777777765 5777777776665445 89999999999999999875 67888888888888888777
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 000687 248 WQLA----LVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRL 323 (1350)
Q Consensus 248 ~~l~----lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~ 323 (1350)
|.+. ++.++++.+++.+..+++++.++...+..+..++....++|.++|||+||.|+||+.+.++..+..++..+.
T Consensus 337 y~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~ 416 (1381)
T KOG0054|consen 337 YGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKL 416 (1381)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHH
Confidence 7653 344445555566677788888899999999999999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 324 GYKSGFAKGMGLGATYFVVFCSYALLLWYGGYL-VRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIF 402 (1350)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-v~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 402 (1350)
-.+.....++...+......++ ..+.++.+. ...+.++....++.+..+.....|+..++..+..+.++.+|.+|+.
T Consensus 417 lrk~~~~~~~~~~~~~~~p~lv--~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~ 494 (1381)
T KOG0054|consen 417 LRKSAYLSALNSFLNFFSPVLV--SVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLK 494 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666665554443333332 233444444 4466788888888877777777899999999999999999999999
Q ss_pred HHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000687 403 RIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP 482 (1350)
Q Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 482 (1350)
+++..++. +.......+..+.+..|+++|.+|+|++....+.|+||||+|++|+.+||||+.|||||+|+.+|+|+++.
T Consensus 495 ~fl~~~e~-~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~ 573 (1381)
T KOG0054|consen 495 EFLLSEEL-DPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK 573 (1381)
T ss_pred HHhcCccc-CccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc
Confidence 99987543 22111101222234469999999999764345699999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccC
Q 000687 483 TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGE 562 (1350)
Q Consensus 483 ~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~ 562 (1350)
.+|+|.++| .++||||+||+|+|||||||+||.| .+.++++++.+.|++..+++.||.|+.|.|||
T Consensus 574 ~sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGE 639 (1381)
T KOG0054|consen 574 LSGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGE 639 (1381)
T ss_pred ccceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecC
Confidence 999999999 4999999999999999999999987 67899999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHH-HHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000687 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKL-VQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~-i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~ 641 (1350)
+|.+|||||||||+||||+|+|++|++||||.||+|+++.++ +.++|+.+.++||+|+|||.++.+++||+|++|+||+
T Consensus 640 rGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 640 RGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred CccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCe
Confidence 999999999999999999999999999999999999997655 5567777788999999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccc
Q 000687 642 VSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFS 721 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1350)
|++.|+|+||++. .+.|.++........... ......+.. ..... . . . ..... . . ...+..
T Consensus 720 I~~~Gty~el~~~--~~~~~~l~~~~~~~~~~~---~~~~~~~~~---~~~~~-~-~-~-~~~~~---~---~-~~~~~~ 780 (1381)
T KOG0054|consen 720 IVESGTYEELLKS--GGDFAELAHEEESEQEEE---ASEKDLESG---ESSRE-S-E-S-RSLES---L---S-SEEEKS 780 (1381)
T ss_pred EecccCHHHHHhc--chhHHHHhhccchhhccc---ccccccccc---ccccc-h-h-h-hhhhh---h---c-cccccc
Confidence 9999999999986 677777743322211110 000000000 00000 0 0 0 00000 0 0 000000
Q ss_pred cccccCCCchhhhhhhhhhhhHHHHHHHHhcchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHH
Q 000687 722 LSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEW--VYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREI 799 (1350)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1350)
..... .+......++...+...+..|..|.+..+ ....+.+++.++...+.....+|+++|.+.-...... ....
T Consensus 781 ~~~~~-~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~~~~ 857 (1381)
T KOG0054|consen 781 KDEKE-EEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--TVST 857 (1381)
T ss_pred ccccc-hhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--CCCc
Confidence 00000 00000001111233444444554444422 2222222333333344455556666655432111000 0234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHh
Q 000687 800 AKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDR 879 (1350)
Q Consensus 800 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~ 879 (1350)
.+|.++|.+++++..++..++++.+...+.++++.||++++++++|+||+|||. +|+|||+|||++|++.+|..+|..
T Consensus 858 ~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~~ 935 (1381)
T KOG0054|consen 858 SFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPFT 935 (1381)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHHH
Confidence 578899999999999999999999999999999999999999999999999997 899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH----HHHHHHHHHHccHHHHH
Q 000687 880 IQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHS----KATQLAGEAIGNVRTVA 955 (1350)
Q Consensus 880 l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~l~gi~tIr 955 (1350)
+..++++++.+++.++++.+..|+ ++++++|+.+++++++++|.++ +|++++..+ +..+|++|++.|+.|||
T Consensus 936 ~~~~~~~~~~~l~~~~vi~~~~P~---fli~~~pl~v~~~~~~~~Y~~t-sReLkRLesitRSPi~sh~~Etl~GlsTIR 1011 (1381)
T KOG0054|consen 936 LEFFLQSLLNVLGILVVISYVTPW---FLIAIIPLGVIYYFVQRYYLAT-SRELKRLESITRSPIYSHFSETLQGLSTIR 1011 (1381)
T ss_pred HHHHHHHHHHHHHHHHHhhHHhHH---HHHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhcccchHHHhHHHHhcCcceee
Confidence 999999999999999999888885 5667888888888888888877 788888764 55689999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHH
Q 000687 956 AFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGA 1035 (1350)
Q Consensus 956 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~ 1035 (1350)
||+.+++|.+++..++|.+.+..+. ......|+++..-+....+.+...+.+.+...+..+.|.....+.+.+.....+
T Consensus 1012 Af~~~~rf~~~~~~~~D~~~~~~f~-~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l 1090 (1381)
T KOG0054|consen 1012 AFGKEERFIQENDELIDENSRAFFL-SISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLL 1090 (1381)
T ss_pred eccccHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999998876543 233334444433332222222222222222222244555555555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCC--CCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCE
Q 000687 1036 AETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDA--TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKT 1113 (1350)
Q Consensus 1036 ~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~--~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~ 1113 (1350)
.-.+....+.+..+.+++|+.++.+.++| .|.+.+. .++.||..|+|+|+|++.+|.++ .++|||||||+|+||||
T Consensus 1091 ~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eK 1168 (1381)
T KOG0054|consen 1091 QWLVRQSSELENNMVSVERVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEK 1168 (1381)
T ss_pred HHHHHHHHHHHhcchhhhHHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCce
Confidence 66777788889999999999999998877 3332222 34446789999999999999755 35799999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHH
Q 000687 1114 LALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIE 1193 (1350)
Q Consensus 1114 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~ 1193 (1350)
||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||||..+ ++|+|||+
T Consensus 1169 VGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e-~sD~~IW~ 1247 (1381)
T KOG0054|consen 1169 VGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDE-YSDDEIWE 1247 (1381)
T ss_pred EEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccc-cCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999865 99999999
Q ss_pred HHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceE
Q 000687 1194 AARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTT 1273 (1350)
Q Consensus 1194 al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~Tv 1273 (1350)
|++.|+++++|.++|+|||++|.|+|.|||.||||++||||||||++|||+||||||++|++|+..||++||+.|++|||
T Consensus 1248 ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTV 1327 (1381)
T KOG0054|consen 1248 ALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTV 1327 (1381)
T ss_pred HHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhh
Q 000687 1274 IVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1274 I~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q 1322 (1350)
|+||||++||.|||||+|||+|+|+|+|+|++|+++ +++.|++++.+.
T Consensus 1328 ltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~-~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1328 LTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSD-KDSLFSSLLKEA 1375 (1381)
T ss_pred EEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhC-CcchHHHHHHHH
Confidence 999999999999999999999999999999999998 589998776653
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-157 Score=1595.81 Aligned_cols=1097 Identities=21% Similarity=0.271 Sum_probs=826.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000687 172 MWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLA 251 (1350)
Q Consensus 172 ~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~ 251 (1350)
..++.++-..++..+|+|+++++..++++. ++|+++|++++|++.+++.+. .+..++..++.+++++++++..-...+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~ 443 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVAS 443 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366777777788899999999999999887 899999999999999999873 344555555554444444332211112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 252 LVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAK 331 (1350)
Q Consensus 252 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1350)
++.++++.+++.+..++.++.++..++..+..++..+.+.|.++||++||+|++|+.+.+++.+..++..+...+.....
T Consensus 444 l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~ 523 (1622)
T PLN03130 444 LIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLS 523 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233344445567777888888888889999999999999999999999999999999888877766655555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 000687 332 GMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSI 411 (1350)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 411 (1350)
++...+..... ..+.++++|++++.+|.++.|.+++++.++.....|+..++..+..+.+++++++||.++++.++..
T Consensus 524 ~~~~~~~~~~~--~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~ 601 (1622)
T PLN03130 524 AFNSFILNSIP--VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERV 601 (1622)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 44333222211 1345667899999999999999999888777888899999999999999999999999999765432
Q ss_pred CCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-cEEEEC
Q 000687 412 DRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS-GQVLLD 490 (1350)
Q Consensus 412 ~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~i~ 490 (1350)
+. . . .......+.|+++|++|+|++++++++|+|+||+|++|++++||||||||||||+++|+|+++|++ |+|.+.
T Consensus 602 ~~-~-~-~~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~ 678 (1622)
T PLN03130 602 LL-P-N-PPLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR 678 (1622)
T ss_pred cc-c-C-CcccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc
Confidence 11 0 1 011112346999999999975444679999999999999999999999999999999999999999 999864
Q ss_pred CeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 491 GHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 491 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
.+|+||+|+||||++||||||+||.| .++++++++++.|++++++..||+|++|.+||+|.+||||
T Consensus 679 -------------~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGG 744 (1622)
T PLN03130 679 -------------GTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGG 744 (1622)
T ss_pred -------------CeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHH
Confidence 47999999999999999999999987 5789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHH-HHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChH
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQ-EALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~ 649 (1350)
|||||+||||+|++|+||||||||||||+++++.+. ++++...+++|+|+|||+++.+..||+|++|++|+|+++|+|+
T Consensus 745 QKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~ 824 (1622)
T PLN03130 745 QKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYE 824 (1622)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHH
Confidence 999999999999999999999999999999998764 5677777899999999999999999999999999999999999
Q ss_pred HHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCC
Q 000687 650 ELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYP 729 (1350)
Q Consensus 650 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (1350)
||+++ ++.|.++++.+....+.... . ....... ....+.. ........ .........+ .....
T Consensus 825 eL~~~--~~~~~~l~~~~~~~~~~~~~-~--~~~~~~~---~~~~~~~--~~~~~~~~--~~~~~~~~~~-----~~~~~ 887 (1622)
T PLN03130 825 ELSNN--GPLFQKLMENAGKMEEYVEE-N--GEEEDDQ---TSSKPVA--NGNANNLK--KDSSSKKKSK-----EGKSV 887 (1622)
T ss_pred HHHhc--chhHHHHHHhcccccccccc-c--ccccccc---ccccccc--cccccccc--cccccccccc-----ccchh
Confidence 99976 68888887654321110000 0 0000000 0000000 00000000 0000000000 00000
Q ss_pred chhhhhhhhhhhhHHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHH
Q 000687 730 SYRHEKLAFKEQASSFWRLAKMNSP--EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLI 807 (1350)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1350)
... .++...+...+..+.+|.+. .++.+.+.+++.++..++..+..+|++.|.+...... .....|.++|+
T Consensus 888 ~~~--~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~-----~~~~~~~~i~~ 960 (1622)
T PLN03130 888 LIK--QEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKT-----HGPLFYNLIYA 960 (1622)
T ss_pred hhh--HHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-----CchhHHHHHHH
Confidence 000 01111222334444444332 1122222222223333333444556655554321111 11235677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHH
Q 000687 808 GLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNT 887 (1350)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~ 887 (1350)
+++++..++.+++.+++.+.+.+++.++|.++|++++++|++|||+ +++|+++|||++|++.++..++..+..++..+
T Consensus 961 ~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~ 1038 (1622)
T PLN03130 961 LLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQI 1038 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999999999999996 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH----HHHHHHHHHHHHHccHHHHHHhhhHHHH
Q 000687 888 ALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEA----AHSKATQLAGEAIGNVRTVAAFNSELMI 963 (1350)
Q Consensus 888 ~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~ 963 (1350)
+.+++.++++++++|.. +++++|+.++++.++.++.+. .++.++ ..++..+++.|+++|++|||+|+.+++|
T Consensus 1039 ~~~i~~~i~i~~~~~~~---~~~~~pl~~~~~~~~~~~~~~-~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f 1114 (1622)
T PLN03130 1039 FQLLSTFVLIGIVSTIS---LWAIMPLLVLFYGAYLYYQST-AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRM 1114 (1622)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHH
Confidence 99888888888877633 334455544444444444333 333333 3456678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCC-Cc-----HHHHHHHHHHHHHHHHHHHH
Q 000687 964 VGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGI-SD-----FSKTIRVFMVLMVSANGAAE 1037 (1350)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~-~~-----~~~~~~~~~~~~~~~~~~~~ 1037 (1350)
.+.+.+..+...+..+..... ..+.++... .+...+.++.+...+..+. .. .+.+...+.........+..
T Consensus 1115 ~~~~~~~~~~~~~~~~~~~~~-~~wl~~~l~--~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~ 1191 (1622)
T PLN03130 1115 AEINGRSMDNNIRFTLVNMSS-NRWLAIRLE--TLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTA 1191 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 888888777766544332211 112221111 1111112222223233221 11 11111112222233334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCC-CCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEE
Q 000687 1038 TLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDA-TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLAL 1116 (1350)
Q Consensus 1038 ~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaI 1116 (1350)
+......++..+.+++|+.++++.++|.+...... .+..++..|.|+|+||+|+|+++ .++||+|+||+|+|||+|||
T Consensus 1192 l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaI 1270 (1622)
T PLN03130 1192 VLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGI 1270 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEE
Confidence 55566677889999999999998776643211111 11123457899999999999743 34799999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHH
Q 000687 1117 VGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAAR 1196 (1350)
Q Consensus 1117 VG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~ 1196 (1350)
|||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||+|++ +++|+|+|+||+
T Consensus 1271 VGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~ 1349 (1622)
T PLN03130 1271 VGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLE 1349 (1622)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 489999999999
Q ss_pred HhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEE
Q 000687 1197 LANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVV 1276 (1350)
Q Consensus 1197 ~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~I 1276 (1350)
.+++++||.++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+|
T Consensus 1350 ~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~I 1429 (1622)
T PLN03130 1350 RAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLII 1429 (1622)
T ss_pred HcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhhc
Q 000687 1277 AHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1277 aHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|||++|+++||||+||++|+|+|+|+|+||+++ ++|.|++|++.+...
T Consensus 1430 AHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~-~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1430 AHRLNTIIDCDRILVLDAGRVVEFDTPENLLSN-EGSAFSKMVQSTGAA 1477 (1622)
T ss_pred eCChHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CCCHHHHHHHHcChh
Confidence 999999999999999999999999999999987 479999999876543
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-156 Score=1588.89 Aligned_cols=1155 Identities=20% Similarity=0.235 Sum_probs=850.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRI 184 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 184 (1350)
++++++.++..++....|.++..+++.+.... .. . .. ..+++++++..++..++.....+...+.+.++...++.
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~--~~-~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~ 378 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEGD--PA-W-VG-YVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVA 378 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cc-c-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555666566667888888654321 11 1 11 11111111111111222111112224667777778888
Q ss_pred HHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HH
Q 000687 185 KYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVP---LI 261 (1350)
Q Consensus 185 ~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p---l~ 261 (1350)
.+|+|+++++..++++. ++|+++|++++|++.+++.+ ..+..++..++.++++++++ .+.+++.+++.++ ++
T Consensus 379 ~i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~~~lg~~~l~~~~v~~l~ 453 (1495)
T PLN03232 379 AIFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---YQQLGVASLFGSLILFLL 453 (1495)
T ss_pred HHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHH
Confidence 99999999999999887 89999999999999999975 33334443333333333222 2223333332222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 262 AVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFV 341 (1350)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1350)
+.+..++.++.++..++.++..++..+.+.|.++||++||+|++|+.+.+++++..++..+...+.....++...+....
T Consensus 454 ~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~ 533 (1495)
T PLN03232 454 IPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSI 533 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22355677888888888899999999999999999999999999999999999988887777666665554433222211
Q ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccC
Q 000687 342 VFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLEL 421 (1350)
Q Consensus 342 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~ 421 (1350)
...+.++++|++++.+|.++.|.+++++.++.....|+..++..+..+.+++++++||.++++.+++.+.. . ...
T Consensus 534 --~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~--~-~~~ 608 (1495)
T PLN03232 534 --PVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ--N-PPL 608 (1495)
T ss_pred --HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--c-CCc
Confidence 12334578899999999999999999988888888899999999999999999999999999876542211 1 111
Q ss_pred CCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH
Q 000687 422 DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 422 ~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~ 501 (1350)
....+.|+++|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+. +
T Consensus 609 ~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~ 676 (1495)
T PLN03232 609 QPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------V 676 (1495)
T ss_pred CCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------E
Confidence 1123469999999999854446799999999999999999999999999999999999999998763 3
Q ss_pred HhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 502 LRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
+|++|+||+|+||||++||||||+||++ .++++++++++.|++++++..||+|++|.|||+|.+|||||||||+||||+
T Consensus 677 ~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAl 755 (1495)
T PLN03232 677 IRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAV 755 (1495)
T ss_pred ecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHH
Confidence 5678999999999999999999999986 688999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 660 (1350)
|++|+||||||||||||+++++.+.+ +++...+++|+|+||||++++..||+|++|++|+|+++|+|+||+++ ++.|
T Consensus 756 y~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~--~~~~ 833 (1495)
T PLN03232 756 YSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS--GSLF 833 (1495)
T ss_pred hcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc--chhH
Confidence 99999999999999999999987754 56666789999999999999999999999999999999999999986 7889
Q ss_pred HHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhhhhhh
Q 000687 661 AKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKE 740 (1350)
Q Consensus 661 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1350)
.++++.+....+.... . ......... .+. . ...... .... ... . .........+.++...
T Consensus 834 ~~l~~~~~~~~~~~~~-~----~~~~~~~~~--~~~---~-~~~~~~--~~~~---~~~---~-~~~~~~~~~~~e~~~~ 893 (1495)
T PLN03232 834 KKLMENAGKMDATQEV-N----TNDENILKL--GPT---V-TIDVSE--RNLG---STK---Q-GKRGRSVLVKQEERET 893 (1495)
T ss_pred HHHHHhcccccccccc-c----ccccccccc--ccc---c-cccccc--cccc---ccc---c-cccchhhhhhHHHHhc
Confidence 8887654321111000 0 000000000 000 0 000000 0000 000 0 0000000000111112
Q ss_pred hhHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 741 QASSFWRLAKMNSPE--WVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNT 818 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 818 (1350)
+...+..+++|.+.. ++.+.+.+++.++..++.....+|++.|.+.... . ......|+.+|++++++..++.+
T Consensus 894 g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~----~~~~~~~l~~y~~l~~~~~~~~~ 968 (1495)
T PLN03232 894 GIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP-K----SYSPGFYIVVYALLGFGQVAVTF 968 (1495)
T ss_pred CcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-C----CCCcchHHHHHHHHHHHHHHHHH
Confidence 333444444444432 1222222222222223333334455444321100 0 11134678888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000687 819 LQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGF 898 (1350)
Q Consensus 819 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~ 898 (1350)
++.+++.+.+.+++.++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.+++++++++
T Consensus 969 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~ 1046 (1495)
T PLN03232 969 TNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIG 1046 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999995 8999999999999999999999999999988888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000687 899 VLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 899 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
+.+|.. +++++|+.++++..+.++.+. ..+......++..+++.|+++|++|||+|+.+++|.+.+.+..+...
T Consensus 1047 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~ 1123 (1495)
T PLN03232 1047 TVSTIS---LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNI 1123 (1495)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 766533 333345544444444443332 22333344456678999999999999999999999988888877766
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-cCCC----cHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVK-HGIS----DFSKTIR-VFMVLMVSANGAAETLTLAPDFIKGG 1049 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1350)
+..+..... ..+..+... .+...+.++.+...+. .+.. .+...+. ++.+......++..+.....+++.+.
T Consensus 1124 ~~~~~~~~~-~~wl~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~ 1200 (1495)
T PLN03232 1124 RFTLANTSS-NRWLTIRLE--TLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSL 1200 (1495)
T ss_pred HHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554432211 222222111 1112222222333332 2321 1122222 22222333445566677778888999
Q ss_pred HHHHHHHHHhccccCCCCCCCCC-CCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHH
Q 000687 1050 RAMRSVFDLLDRKTEIEPDDPDA-TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVI 1128 (1350)
Q Consensus 1050 ~a~~rv~~~l~~~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~ 1128 (1350)
.+++|+.++++.++|.+...... .+..++..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||+
T Consensus 1201 ~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~ 1279 (1495)
T PLN03232 1201 NSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSML 1279 (1495)
T ss_pred HHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHH
Confidence 99999999998776643211111 11123456899999999999643 34799999999999999999999999999999
Q ss_pred HHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCC
Q 000687 1129 ALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLP 1208 (1350)
Q Consensus 1129 ~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp 1208 (1350)
++|+|+|+|++|+|+|||+|+++++++++|++|++|||||+||+|||||||+|++ +++|+|+|+|++.++++++|.++|
T Consensus 1280 ~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp 1358 (1495)
T PLN03232 1280 NALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNP 1358 (1495)
T ss_pred HHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCc
Confidence 9999999999999999999999999999999999999999999999999999986 599999999999999999999999
Q ss_pred CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCE
Q 000687 1209 DGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHV 1288 (1350)
Q Consensus 1209 ~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~Dr 1288 (1350)
+||||++||+|.+|||||||||||||||+++|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++|||
T Consensus 1359 ~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~Dr 1438 (1495)
T PLN03232 1359 FGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDK 1438 (1495)
T ss_pred CCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhhc
Q 000687 1289 IAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1289 I~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|+||++|+|+|+|+|+||+++ ++|.|++|++.+...
T Consensus 1439 IlVL~~G~ivE~Gt~~eLl~~-~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1439 ILVLSSGQVLEYDSPQELLSR-DTSAFFRMVHSTGPA 1474 (1495)
T ss_pred EEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhChh
Confidence 999999999999999999987 467999999987654
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.9e-152 Score=1542.67 Aligned_cols=1189 Identities=19% Similarity=0.217 Sum_probs=871.3
Q ss_pred hHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++.+++.++ +.++.+++..++..++....|+++..+++.+..... . . ... ..++..++++.++..++....
T Consensus 307 l~~~l~~~~~----~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~-~-~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (1522)
T TIGR00957 307 LFKVLYKTFG----PYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMA-P-D-WQG-YFYTGLLFVCACLQTLILHQY 378 (1522)
T ss_pred HHHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-c-c-chH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4444554432 223333444444445555556677888876533211 1 1 111 111122222222223332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 247 (1350)
.+.....+.++...++..+|+|+++++..++++. ++|+++|++++|++++.+.. ..+..++..++.+++++++++..-
T Consensus 379 ~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~ 456 (1522)
T TIGR00957 379 FHICFVSGMRIKTAVMGAVYRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNL 456 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3335567888888899999999999999999887 89999999999999998854 233333333333333333322221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000687 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
.+.+++.++++++++.+..++.++.++..++..+..++..+.+.|.++||++||+|++|+.+.+++++..++..+...+.
T Consensus 457 g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~ 536 (1522)
T TIGR00957 457 GPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKS 536 (1522)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334444555566666777788888888899999999999999999999999999999999999998888777665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRH--HFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~--g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
.....+...... . ....+.++.++.+.+.. +.++.+.+++.+.++.....|+..++..+..+.+++++.+||.+++
T Consensus 537 ~~~~~~~~~~~~-~-~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l 614 (1522)
T TIGR00957 537 AYLHAVGTFTWV-C-TPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFL 614 (1522)
T ss_pred HHHHHHHHHHHH-H-HHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554433222211 1 11122233455666653 5688888888776666677799999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCC-CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000687 406 DHKPSIDRNSESGLELD-SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~-~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
+.+++.+. ........ ...+.|+++|++|+|++. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++
T Consensus 615 ~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~ 692 (1522)
T TIGR00957 615 SHEELEPD-SIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVE 692 (1522)
T ss_pred cCcccccc-cccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCC
Confidence 86543211 00001111 112379999999999743 3479999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCC
Q 000687 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g 564 (1350)
|+|.++| +|+||+|+||+|++||+|||.+|.+ .+++++.++++.|++.+++..+|+|++|.+|++|
T Consensus 693 G~i~~~g-------------~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 693 GHVHMKG-------------SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred cEEEECC-------------EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 9999998 5999999999999999999999976 4667788889999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHH---hcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000687 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDR---FMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~D~i~vl~~G~ 641 (1350)
.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999999998853 456899999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcc-cCCCCCCcccCCC-CC--ccc-ccCCCC----CCCCccccc
Q 000687 642 VSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNAR-KSSARPSSARNSV-SS--PII-ARNSSY----GRSPYSRRL 712 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~--~~~-~~~~~~----~~~~~~~~~ 712 (1350)
|++.|+|+++.++ ++.|.+++..+............ ............. .. ... ...... .........
T Consensus 839 i~~~g~~~~l~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1522)
T TIGR00957 839 ISEMGSYQELLQR--DGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGD 916 (1522)
T ss_pred EEeeCCHHHHHhc--chhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccc
Confidence 9999999999976 67888887644321111000000 0000000000000 00 000 000000 000000000
Q ss_pred cCCcC-Ccccccc-ccCCC-chhhhhhhhhhhhHHHHHHHHhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 713 SDFST-SDFSLSL-DATYP-SYRHEKLAFKEQASSFWRLAKMNSP-EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYY 788 (1350)
Q Consensus 713 ~~~~~-~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1350)
..... ....... ..... ....+.+....+...+..|+.|.+. ++...++.+++.++..++..+..+|++.|.+...
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~ 996 (1522)
T TIGR00957 917 QSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPM 996 (1522)
T ss_pred ccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 00000 0000000 00000 0000011111222233333333332 2222222223333333444455566666554211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhh
Q 000687 789 NPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALD 868 (1350)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D 868 (1350)
.... ......|..+|++++++..++.+++.+++.+.+.+++.++|++++++++++|++|||+ +++|+++|||++|
T Consensus 997 ~~~~---~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~D 1071 (1522)
T TIGR00957 997 VNGT---QNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKE 1071 (1522)
T ss_pred ccCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHH
Confidence 0000 0112345667888888888888888899999999999999999999999999999996 8999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHH
Q 000687 869 ANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAG 945 (1350)
Q Consensus 869 ~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 945 (1350)
++.++..++..+..++..++.+++.++++++.+|+++++++++++ ++.++++++.+. ..+......++..+++.
T Consensus 1072 i~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~ 1148 (1522)
T TIGR00957 1072 LDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGL---LYFFVQRFYVASSRQLKRLESVSRSPVYSHFN 1148 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999998888888876555444333 333444444333 23333344566779999
Q ss_pred HHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-HcCCCcHHHHHHH
Q 000687 946 EAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLV-KHGISDFSKTIRV 1024 (1350)
Q Consensus 946 e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv-~~g~~~~~~~~~~ 1024 (1350)
|++.|++|||+|+++++|.+++.+..+...+..+.......+.....+++. ..+.++.+...+ ..|.++.|.+..+
T Consensus 1149 E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~ 1225 (1522)
T TIGR00957 1149 ETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLS 1225 (1522)
T ss_pred HHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 999999999999999999999999998887776554433332222222221 223333344444 3577888988877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCC-CCCCCCCCCcEEEEEEEEECCCCCCCCcccc
Q 000687 1025 FMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDA-TPVPDRLRGEVELKHVDFSYPSRPDIPIFRD 1103 (1350)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~ 1103 (1350)
+.+......++..+.....+++.++.+++|+.++++.++|.+...... .+..++..|.|+|+||+|+|+++. ++||+|
T Consensus 1226 l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~ 1304 (1522)
T TIGR00957 1226 VSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRH 1304 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccc
Confidence 777778888888899999999999999999999998776543111111 111234678999999999998643 479999
Q ss_pred eeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCC
Q 000687 1104 LSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGH 1183 (1350)
Q Consensus 1104 vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~ 1183 (1350)
|||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+||||+||++..
T Consensus 1305 is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~ 1384 (1522)
T TIGR00957 1305 INVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS 1384 (1522)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000687 1184 ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1184 ~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
+++|+|+|+|++.++++++|.++|+||||+|||+|.+||||||||+||||||+|+|+|||||||||+||++||+.||++
T Consensus 1385 -~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~ 1463 (1522)
T TIGR00957 1385 -QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST 1463 (1522)
T ss_pred -CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1264 LDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|++.+++||||+||||++|+++||||+|||+|+|+|+|+|+||+++ +|.|++|++.
T Consensus 1464 l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~--~~~f~~l~~~ 1519 (1522)
T TIGR00957 1464 IRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ--RGIFYSMAKD 1519 (1522)
T ss_pred HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC--CCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 7999999986
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.8e-145 Score=1473.62 Aligned_cols=1169 Identities=18% Similarity=0.211 Sum_probs=859.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRI 184 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 184 (1350)
++++++.++..++....|++++.+++.+... +. . ......+++.+++..++..++.....+...+.+.++-..+..
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~--~~-~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~ 322 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD--NA-T-WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNA 322 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--Cc-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555556666677777755321 11 1 111111122222222333344444444555677777777888
Q ss_pred HHHHHHHhCChhhHh--ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000687 185 KYLEAALNQDVQYFD--TEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIA 262 (1350)
Q Consensus 185 ~~~~~l~~~~~~~fd--~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~ 262 (1350)
.+|+|+++++...+. +. ++|+++|++++|++.+.+++. .+..++...+.++++++++..+..+.+++.++++++.+
T Consensus 323 ~if~K~l~ls~~~~~~~~~-~~G~i~nl~s~Dv~~i~~~~~-~~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~ 400 (1560)
T PTZ00243 323 LIFEKCFTISSKSLAQPDM-NTGRIINMMSTDVERINSFMQ-YCMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTL 400 (1560)
T ss_pred HHHHHHHhCChhhhCCCCC-CHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 899999999988775 23 789999999999999999873 34556666666666666666655557777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 263 VIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVV 342 (1350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1350)
.+..++.++..+..++..+..++..+.+.|.++|||+||.++||+.+.+++++..++..+...+......+...+.....
T Consensus 401 pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p 480 (1560)
T PTZ00243 401 PLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATP 480 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888889999999999999999999999999999999999999999999999888777776666555554433333222
Q ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC----CCCC--
Q 000687 343 FCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSID----RNSE-- 416 (1350)
Q Consensus 343 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~----~~~~-- 416 (1350)
.+ +.++.++++.+..+.++.+.+++++.++.....|+..++..+..+.++.+|++||.++++.++... +..+
T Consensus 481 ~l--~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~ 558 (1560)
T PTZ00243 481 TL--MIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYW 558 (1560)
T ss_pred HH--HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhc
Confidence 22 223356778888899999999999888888888999999999999999999999999997643100 0000
Q ss_pred -------C--C---------------cc---------------------------CCCCcceEEEEEEEEECCCC-----
Q 000687 417 -------S--G---------------LE---------------------------LDSVSGLIELKHVDFSYPSR----- 440 (1350)
Q Consensus 417 -------~--~---------------~~---------------------------~~~~~g~i~~~~v~f~y~~~----- 440 (1350)
. . .. .....+.+.++|++|+++..
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1560)
T PTZ00243 559 REQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHI 638 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccc
Confidence 0 0 00 00011346778887765310
Q ss_pred --------------------------------CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000687 441 --------------------------------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 441 --------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~ 718 (1560)
T PTZ00243 639 VEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVW 718 (1560)
T ss_pred ccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE
Confidence 124589999999999999999999999999999999999999999998
Q ss_pred ECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
++ ++||||+|+|++|++||+|||.++.+ .+.+++.++.+.+++++++..+|+|++|.+|++|.+||
T Consensus 719 ~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LS 784 (1560)
T PTZ00243 719 AE-------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLS 784 (1560)
T ss_pred EC-------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCC
Confidence 74 37999999999999999999999875 35567788888899999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
|||||||+|||||+.+|+|||||||||+||+++.+.+.+ .+....+|+|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 785 GGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~ 864 (1560)
T PTZ00243 785 GGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGS 864 (1560)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999998877765 4444557899999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccC
Q 000687 648 HDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAT 727 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1350)
++++++. +.|.++........+... .. .................. .... ...... ............
T Consensus 865 ~~~l~~~---~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~---~~~~~~~~~~~~ 931 (1560)
T PTZ00243 865 SADFMRT---SLYATLAAELKENKDSKE--GD-ADAEVAEVDAAPGGAVDH-EPPV---AKQEGN---AEGGDGAALDAA 931 (1560)
T ss_pred HHHHHhC---hHHHHHHHhhcccccccc--cc-cccccccccccccccccc-cccc---cccccc---cccccccccccc
Confidence 9999864 457766543221110000 00 000000000000000000 0000 000000 000000000000
Q ss_pred CCchhhhhhhhhhhhHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 000687 728 YPSYRHEKLAFKEQASSFWRLAKMNSPE--WVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYL 805 (1350)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1350)
.... .+.++...+...|+.|+.|.+.. +.++++.++..++..++..+..+|++.|...... .....|+.+
T Consensus 932 ~~~l-~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~-------~~~~~~l~~ 1003 (1560)
T PTZ00243 932 AGRL-MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK-------LSAATYLYV 1003 (1560)
T ss_pred cchh-hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-------CCcccHHHH
Confidence 0000 00001111223344444443321 1111111111122223333344555544322111 112345666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHH
Q 000687 806 LIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQ 885 (1350)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~ 885 (1350)
|+++.++..++.+++.++....+.+...++|+.+|++++++|+.|||+ +++|+++|||++|++.+++.++..+..++.
T Consensus 1004 y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l~~~l~~~~~ 1081 (1560)
T PTZ00243 1004 YLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTLPMSYLYLLQ 1081 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 776666666666777777777888889999999999999999999996 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHH
Q 000687 886 NTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELM 962 (1350)
Q Consensus 886 ~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~ 962 (1350)
.++.+++.++++++.+|.+. ++++|+.+++..+..++.+. ..+......++..+++.|++.|++|||+|+.++.
T Consensus 1082 ~~~~~i~~li~~~~~~p~~~---~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~ 1158 (1560)
T PTZ00243 1082 CLFSICSSILVTSASQPFVL---VALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHL 1158 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHH
Confidence 99999999988888888433 33445544444444444333 2223334556678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH--HcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 963 IVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLV--KHGISDFSKTIRVFMVLMVSANGAAETLT 1040 (1350)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1350)
+.++|.+.++...+..+.......+.....+++..+...++.+++.... ..+..+++.+..++.+......++..+..
T Consensus 1159 ~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~ 1238 (1560)
T PTZ00243 1159 VMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVR 1238 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888776655444433333334443333333333443332 33445677665555566666778888888
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCCC-CC-C-----------------------CCCCC---CCCCCCCcEEEEEEEEEC
Q 000687 1041 LAPDFIKGGRAMRSVFDLLDRKTEIE-PD-D-----------------------PDATP---VPDRLRGEVELKHVDFSY 1092 (1350)
Q Consensus 1041 ~~~~~~~~~~a~~rv~~~l~~~~~~~-~~-~-----------------------~~~~~---~~~~~~g~I~f~nVsf~Y 1092 (1350)
...+++..+.+++|+.++++..++.+ +. + +...+ +.++..|.|+|+||+|+|
T Consensus 1239 ~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y 1318 (1560)
T PTZ00243 1239 QVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRY 1318 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEe
Confidence 88999999999999999986443221 00 0 00000 111245889999999999
Q ss_pred CCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCc
Q 000687 1093 PSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFA 1172 (1350)
Q Consensus 1093 ~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~ 1172 (1350)
++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|+||||||+||+
T Consensus 1319 ~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~ 1397 (1560)
T PTZ00243 1319 REG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFD 1397 (1560)
T ss_pred CCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCcccc
Confidence 754 3469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC-CCEEEEecCCCC
Q 000687 1173 STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK-AEIMLLDEATSA 1251 (1350)
Q Consensus 1173 gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~-p~ILlLDEaTSa 1251 (1350)
||||+||+++. +++|+|+|+||+.++++++|.++|+||||.|||+|.|||||||||||||||||++ |+|||||||||+
T Consensus 1398 gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSa 1476 (1560)
T PTZ00243 1398 GTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATAN 1476 (1560)
T ss_pred ccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCcc
Confidence 99999999874 6899999999999999999999999999999999999999999999999999996 899999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhh
Q 000687 1252 LDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1252 LD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
||++||+.|+++|++.+++||+|+||||++|+.+||+|+||++|+|+|+|+|+||+++ ++|.|++|++.+..
T Consensus 1477 LD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1477 IDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEALGR 1548 (1560)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999999999999999999999986 48999999987643
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.1e-143 Score=1453.32 Aligned_cols=1170 Identities=19% Similarity=0.239 Sum_probs=840.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 112 FVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAAL 191 (1350)
Q Consensus 112 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~ 191 (1350)
++..++....|+++..+++.+..... ... .....+++.++++.++..++.....+.....+.++-..+...+|+|++
T Consensus 90 ~~~~~~~~~~P~ll~~li~~~~~~~~-~~~--~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 90 YFGEATKAVQPLLLGRIIASYDPFNA-PER--EIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC-Cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555567777876532111 100 011112222222222333333334444455566666666666799999
Q ss_pred hCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 192 NQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATS 271 (1350)
Q Consensus 192 ~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 271 (1350)
+++...+++. ++|+++|++++|++.+.+++... ..+....+.+++++++++....+.+++.++++++++.+..++.++
T Consensus 167 ~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999887 89999999999999999976543 333444454555555555555556777778888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 272 LAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLW 351 (1350)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1350)
+.+..++..+..++..+.+.|.++||++||+|+||+.+.+++++..++..+...+......+...+..+ ....+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFF--SGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 999999999999999999999999999999999999999999988887777666655544333222222 222344566
Q ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEE
Q 000687 352 YGGYLVRHHFTNGGLAIATMFAVMIGGLAL-AQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIEL 430 (1350)
Q Consensus 352 ~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~ 430 (1350)
++++.+..+ ++.+.+++++.++.....|+ ..++..+..+.++.++++||.++++.++..+. .. . .....|++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~-~~---~--~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTL-EY---N--LTTTEVEM 395 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc-cc---c--CCCCceEE
Confidence 677766644 57888888776666665666 46888889999999999999999986543111 10 0 11235899
Q ss_pred EEEEEECCCCC-------------------------------CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000687 431 KHVDFSYPSRP-------------------------------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERF 479 (1350)
Q Consensus 431 ~~v~f~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 479 (1350)
+|++|.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13589999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCcccc
Q 000687 480 YDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQ 559 (1350)
Q Consensus 480 ~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 559 (1350)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.+++.++++.|++.+++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999975 45566778888889999999999999999
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000687 560 VGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 560 v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~ 638 (1350)
+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 4677778999999999999998999999999
Q ss_pred CCEEEEecChHHHHhccCCcHHHHHHHHHHHhh-----Hh----h-------hh-hc-----ccC------CCCCCccc-
Q 000687 639 QGSVSEIGTHDELIAKGENGVYAKLIRMQEAAH-----ET----A-------LN-NA-----RKS------SARPSSAR- 689 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~-----~~----~-------~~-~~-----~~~------~~~~~~~~- 689 (1350)
+|+|++.|+++++... ++.|.+.+....... .. . .. .. ... ...+....
T Consensus 622 ~g~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAK--RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEK 699 (1490)
T ss_pred CCEEEEEcCHHHHHhc--ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999875 456666553110000 00 0 00 00 000 00000000
Q ss_pred -------------------------------C-CCCCccc------cc----CCCCCCCCc---ccccc-----------
Q 000687 690 -------------------------------N-SVSSPII------AR----NSSYGRSPY---SRRLS----------- 713 (1350)
Q Consensus 690 -------------------------------~-~~~~~~~------~~----~~~~~~~~~---~~~~~----------- 713 (1350)
. ....+.. +. .......+. ..+..
T Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1490)
T TIGR01271 700 RKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLM 779 (1490)
T ss_pred ccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 0 0000000 00 000000000 00000
Q ss_pred CCc-------CC------------c-----ccc-------cccc----CCC--chh-----hhhhhhhhhhHHHHHHHHh
Q 000687 714 DFS-------TS------------D-----FSL-------SLDA----TYP--SYR-----HEKLAFKEQASSFWRLAKM 751 (1350)
Q Consensus 714 ~~~-------~~------------~-----~~~-------~~~~----~~~--~~~-----~~~~~~~~~~~~~~~~~~~ 751 (1350)
... .. + ... ..+. ..+ +.. .+.+....+...+..|++|
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y 859 (1490)
T TIGR01271 780 THSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRY 859 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHH
Confidence 000 00 0 000 0000 000 000 0000111122334444444
Q ss_pred cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c-CCchh-H----------HHHHHHHH-HHHHHHHHHHHH
Q 000687 752 NSP--EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVY--Y-NPDHA-Y----------MIREIAKY-CYLLIGLSSAEL 814 (1350)
Q Consensus 752 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~----------~~~~~~~~-~~~~~~l~~~~~ 814 (1350)
.+. .+.++++.+++.++..++..+..+|+..|.... + ..... . .......| +++|++++++..
T Consensus 860 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1490)
T TIGR01271 860 ITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVL 939 (1490)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHH
Confidence 332 223333333333344444445555555443210 0 00000 0 00011122 455566666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000687 815 LFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVAC 894 (1350)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~ 894 (1350)
++.+++.+++.+.+.+++.++|.+++++++++|+.||++ +++|+++|||++|++.+++.++..+..++..++.+++.+
T Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l 1017 (1490)
T TIGR01271 940 ALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAI 1017 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999999999986 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH----HHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHH
Q 000687 895 TAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDME----AAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSN 970 (1350)
Q Consensus 895 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 970 (1350)
+++++++|++++ +++|+++++++++.++.+. .++.+ ...++..+++.|++.|+.|||+|++++.+.++|.+.
T Consensus 1018 ~~i~~~~p~l~l---~~~~l~~~~~~~~~~~~~~-~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~ 1093 (1490)
T TIGR01271 1018 FVVSVLQPYIFI---AAIPVAVIFIMLRAYFLRT-SQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKA 1093 (1490)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHH
Confidence 999888887544 3445555444445544443 33333 344567799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH--HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 971 LQTPLRRCFWKGQIAGSGYGVAQFCLYASY--ALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKG 1048 (1350)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1350)
.+...+..+.......+......++..+.. ++.++++.. .++.+.+..++.+......++..++..+.++...
T Consensus 1094 ~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~ 1168 (1490)
T TIGR01271 1094 LNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGL 1168 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887655443322222111111111111111 111222222 1222333333333334445556666677788889
Q ss_pred HHHHHHHHHHhccccCCCCCCCC---------------CCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCE
Q 000687 1049 GRAMRSVFDLLDRKTEIEPDDPD---------------ATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKT 1113 (1350)
Q Consensus 1049 ~~a~~rv~~~l~~~~~~~~~~~~---------------~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~ 1113 (1350)
+.+++|+.++++.+++....... ..++.++..|.|+|+||+|+|++. .++||+|+||+|+|||+
T Consensus 1169 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gek 1247 (1490)
T TIGR01271 1169 MRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQR 1247 (1490)
T ss_pred HHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCE
Confidence 99999999999876653211100 001123456899999999999753 45799999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHH
Q 000687 1114 LALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIE 1193 (1350)
Q Consensus 1114 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~ 1193 (1350)
||||||||||||||+++|+|+|+ ++|+|+|||+|+++++++++|++|+||||||+||+||||+||+++. .++|+++|+
T Consensus 1248 vaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~ 1325 (1490)
T TIGR01271 1248 VGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWK 1325 (1490)
T ss_pred EEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHH
Confidence 99999999999999999999998 7999999999999999999999999999999999999999999875 589999999
Q ss_pred HHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceE
Q 000687 1194 AARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTT 1273 (1350)
Q Consensus 1194 al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~Tv 1273 (1350)
|++.++++++|.++|+||||+|+|+|.+||||||||||||||||++|+|||||||||+||++||+.|+++|++.+++|||
T Consensus 1326 aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~Tv 1405 (1490)
T TIGR01271 1326 VAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTV 1405 (1490)
T ss_pred HHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhhccc
Q 000687 1274 IVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHS 1327 (1350)
Q Consensus 1274 I~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~~~ 1327 (1350)
|+||||++++.+||||+||++|+|+|+|+|++|+++ +|.|++|++.+.....
T Consensus 1406 I~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~~~~ 1457 (1490)
T TIGR01271 1406 ILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADRLKL 1457 (1490)
T ss_pred EEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhChhcc
Confidence 999999999999999999999999999999999975 8999999997665544
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-110 Score=991.17 Aligned_cols=574 Identities=39% Similarity=0.610 Sum_probs=539.0
Q ss_pred cchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
...+++++.|+++. |+.+..+.++.++......+.|.+.++++|.+..... ....+...+..+.++.++..++++
T Consensus 132 ~~~~~rl~~l~~~~-~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~----~~~~~~~~~~~l~~l~~~~a~~~~ 206 (716)
T KOG0058|consen 132 HTLLKRLLGLLKPE-WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD----SADALKRACTILLGLFLIGALANA 206 (716)
T ss_pred hhHHHHHHHHhchh-HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44788999999876 5566778888888888888889999999998754111 123333455666677778889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (1350)
++.+++.++++++..++|.++|+++++++++|||.+ ++|+++||++.|+..+.+.++..+...+.+.+..++++++||+
T Consensus 207 ~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~ 285 (716)
T KOG0058|consen 207 IRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS 285 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000687 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|+|++++++.+|+++++..+|+++.+++.++.|++.++.+...+|.+++|||||+|+.|+.+.++|.+..++..+.+.
T Consensus 286 ~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~ 365 (716)
T KOG0058|consen 286 LSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSK 365 (716)
T ss_pred hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
|.+...+.+++...+..++..+.++++|++++..|.+|.|.+++|++|......++..+...++.+.++..|.+|++|++
T Consensus 366 k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 366 KEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCc-cCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000687 406 DHKPSIDRNSESGL-ELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~-~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
|++|.++.. +. .+...+|.|+|+||+|+||.+|+.+||+|+||+|+|||+||||||||+||||++++|.|||+|++
T Consensus 446 dr~P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 446 DRKPRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred ccCCCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 999987542 32 22257899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCC
Q 000687 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g 564 (1350)
|+|++||+||+++++.+||++||+|.|||.||++||+|||.||.+++++|++..|++.|++|+||.++|+||||.|||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000687 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~ 644 (1350)
.+|||||||||||||||++||.||||||||||||+++|..|+++|++.++++|||+|||||+|+++||+|+|+++|+++|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHHHH
Q 000687 645 IGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~~~~l~~~~~~ 669 (1350)
.|+|+||++++ +|.|++|++.|..
T Consensus 683 ~G~h~eLl~~~-~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 683 MGTHDELLSKP-NGLYAKLVQRQLD 706 (716)
T ss_pred cccHHHHhhCc-ccHHHHHHHHhcc
Confidence 99999999983 6899999987764
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.6e-110 Score=983.91 Aligned_cols=575 Identities=37% Similarity=0.617 Sum_probs=546.5
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
..+|+++.+.+++|+++..+.++.++......+.|++.+++++.+...++. .......+.++.++.++..++++++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~--~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS--ADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999888762211 333445566777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 902 (1350)
++.++++++..++|..+|+++++++++|||. |.+|++++|++.|+..+.+.++..+...+.+.+..++++..|++++|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 9999999999999999999999999999996 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
.|+++.+..+|++.+...++.++.++.+++.+++.+.++....|.+.+++|||+|+.|+...++|.+.++...+...+.+
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000687 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~ 1062 (1350)
...+.+++.+++..++....++|||++++..|.++.+.+..++++......++..+...+.++.++..+.+|+++++|++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000687 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1142 (1350)
|..++. +...|....|.|+|+||+|+||+||+.|||+|+||+|+|||+||+|||||+||||++++|+|||+|++|+|
T Consensus 449 P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 449 PRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 987754 22233357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCC
Q 000687 1143 MIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1143 ~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
++||+||++++.++||++||+|.|||+||++||+|||.||.++++||||.+|+++||+|+||.++|+||||.|||+|.+|
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecC
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt 1302 (1350)
||||||||||||||+|||+||||||||||||+++|..||++|++..+++|||+|||||+||++||+|+|+++|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHHHhhhhc
Q 000687 1303 HSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|+|||++ ++|.|++|++.|...
T Consensus 686 h~eLl~~-~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 686 HDELLSK-PNGLYAKLVQRQLDS 707 (716)
T ss_pred HHHHhhC-cccHHHHHHHHhccc
Confidence 9999998 689999999988654
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-109 Score=1031.36 Aligned_cols=656 Identities=41% Similarity=0.664 Sum_probs=582.8
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCCCC------Ccchh--hcccchhhhhhcc----cCC-CCCC
Q 000687 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYANP------SPQAQ--AQETTTTTKRQME----NNS-SSSS 71 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~----~~~-~~~~ 71 (1350)
.|.+..+..+ |.| +|++|+||+.|+..+..+.+..|.+- .++++ +.+.+.......+ ... +..+
T Consensus 545 aHRLStIrna--D~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~ 622 (1228)
T KOG0055|consen 545 AHRLSTIRNA--DKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSR 622 (1228)
T ss_pred eeehhhhhcc--CEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccC
Confidence 6999999998 999 99999999999977666554322111 11100 0000001100000 000 0000
Q ss_pred C-----C--CCCCCCCCCC-----CccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCch
Q 000687 72 S-----A--ANSEPKKPSD-----VTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNM 139 (1350)
Q Consensus 72 ~-----~--~~~~~~~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 139 (1350)
. . ...+.++... ....++.+++++.+| .|+++++|++++++.|...|++.++++.++..+... +.
T Consensus 623 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~--~~ 699 (1228)
T KOG0055|consen 623 GSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP--DD 699 (1228)
T ss_pred CccccccccccccccccccccccccccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC--Ch
Confidence 0 0 0001111111 146789999999887 588899999999999999999999999999987642 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHH
Q 000687 140 DKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQ 219 (1350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~ 219 (1350)
+.+......|++++++++++.+++.+++.+++.++++++..|+|..+|+++++++++|||..+++|.|.+|+.+|...++
T Consensus 700 ~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr 779 (1228)
T KOG0055|consen 700 DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVR 779 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHH
Confidence 23333344588899999999999999999999999999999999999999999999999987666999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHH
Q 000687 220 DAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRV 299 (1350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ 299 (1350)
..+++.+..+++++..++++++++|+++|+|+++++++.|++++..+...+.+.....+..+..++.+..+.|+++||||
T Consensus 780 ~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrT 859 (1228)
T KOG0055|consen 780 AAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRT 859 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHH
Q 000687 300 VFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGL 379 (1350)
Q Consensus 300 Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~ 379 (1350)
|++|+.|+++.+.|.+..++..+...+.+.+.++.+++.+.+.++.+++.+|||++++.+|.++...++.+++.+.+..+
T Consensus 860 V~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 860 VAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEE
Q 000687 380 ALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTI 459 (1350)
Q Consensus 380 ~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~ 459 (1350)
.+++.....+++.+++.|+.+|+++++++|+++...+.+...++.+|.|+|+||+|+||.+|+.+||+|+||+|++|+++
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 99999999999999999999999999999987664434444567889999999999999999999999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHH
Q 000687 460 ALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEA 539 (1350)
Q Consensus 460 ~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~ 539 (1350)
||||||||||||++.||.|+|+|++|.|.|||+|++++++++||++||+|.|||.||++||||||+||...++++|+.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999666899999999
Q ss_pred HHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEE
Q 000687 540 ARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTL 619 (1350)
Q Consensus 540 ~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i 619 (1350)
|+.|++|+||.+||+||||.|||+|.+||||||||||||||++|||+||||||+|||||.++|+.+|++|++.+.|||+|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000687 620 VIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 620 ~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
+|||||+|+++||.|+|+++|+|+|+|||++|+++ +|.|.+|++.|.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQS 1226 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhcc
Confidence 99999999999999999999999999999999996 899999998764
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.8e-92 Score=877.03 Aligned_cols=570 Identities=31% Similarity=0.468 Sum_probs=515.2
Q ss_pred cchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
+.++.+++..+.++++. +.-.++.+++..+.....|.+...++|.+..... ...+...++.++++++...++.+
T Consensus 139 ~~~~~~f~~~~~~~~~~-l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-----~~tL~vl~ig~~~~~l~~~~l~~ 212 (709)
T COG2274 139 PFGLSWFIPLLFKYRRL-LFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-----RSTLTVLAIGLLLAALFEALLRL 212 (709)
T ss_pred ccchHhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666655443 2223333333344444444456777887654321 22333445556666777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (1350)
++.++..+.+.++..++-.++|+|++++|++||+++ ++|++++|+. |.+.|+++++..+...+.++.++++.+++|++
T Consensus 213 lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ 290 (709)
T COG2274 213 LRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFL 290 (709)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988 9999999996 99999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000687 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|+|++++++.+|+++++..++.+.+++..++..+..++.++...|++.||++||+.+.|.++..+|++...++.+.++
T Consensus 291 ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~ 370 (709)
T COG2274 291 YSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGF 370 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+..........+..++..++.++++|+|+++|.+|.+|.|.++++.+.......|+..+...+.++++++.+.+|+.+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil 450 (709)
T COG2274 371 KTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDIL 450 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988888888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000687 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+.++|.+... .....+...|.|+|+||+|+|+.+ ++++|+|+||+|++||++||||+||||||||+|+|.|+|+|++|
T Consensus 451 ~~~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G 528 (709)
T COG2274 451 DTPPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQG 528 (709)
T ss_pred cCCccccccc-ccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 9988753311 112445678999999999999754 34799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCC
Q 000687 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~ 565 (1350)
+|++||.|+.+++++++|++||||+||+.||+|||+|||++++|++++|++++||+.+++|+||.++|.||+|.+||+|.
T Consensus 529 ~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~ 608 (709)
T COG2274 529 RILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGA 608 (709)
T ss_pred eEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
+|||||||||+|||||++||+||||||||||||+++|+.|.+.|.++..|+|+|+||||++++++||||+||++|+|+++
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~ 688 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQ 688 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHH
Q 000687 646 GTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~~~~ 667 (1350)
|+|+||++. +|.|++++..|
T Consensus 689 gs~~ell~~--~g~y~~l~~~q 708 (709)
T COG2274 689 GSHEELLAQ--GGLYARLYQQQ 708 (709)
T ss_pred CCHHHHHHh--cChHHHHHhcc
Confidence 999999998 89999998754
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.1e-92 Score=878.94 Aligned_cols=563 Identities=31% Similarity=0.463 Sum_probs=511.2
Q ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 750 KMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGE 829 (1350)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 829 (1350)
....+++..+.-.++.+++..++..+.|++...+++....... ........+.+++++++..++.+++.+++.+++.
T Consensus 147 ~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~ 223 (709)
T COG2274 147 PLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGK 223 (709)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444455555555555555555555432221 1223334455666778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 830 NLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLI 909 (1350)
Q Consensus 830 ~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l 909 (1350)
++...+-.++|+|+++.|+.||.+ +++|++++|+ +|.+.|++++...+...+.++++.++.++++++++|+|+++++
T Consensus 224 rld~~l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l 300 (709)
T COG2274 224 RLDLELSGRFFRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVL 300 (709)
T ss_pred HHhHHHHHHHHHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985 7899999999 5999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000687 910 AVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGY 989 (1350)
Q Consensus 910 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1350)
+.+|++++..++..+++++..++..+..+..++++.|++.|++|||+.+.|..+..+|.+...+..+..++..+......
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999998898888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCC
Q 000687 990 GVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDD 1069 (1350)
Q Consensus 990 ~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~ 1069 (1350)
.+.+++..++.++++|+|++++..|.+|+|.++++.+.......++..+...+.++++...+.+|+.++++.++|.+.+.
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998865433
Q ss_pred CCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccC
Q 000687 1070 PDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDI 1149 (1350)
Q Consensus 1070 ~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di 1149 (1350)
. ...++...|+|+|+||+|+|+.++ +++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+|+
T Consensus 461 ~--~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl 537 (709)
T COG2274 461 T--LIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDL 537 (709)
T ss_pred c--cccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeH
Confidence 2 122345789999999999998763 4799999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1150 RKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1150 ~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++++++++|++|+|||||++||+|||||||++++|++++||+++||+.+++|+||.++|.||||+|||+|.+||||||||
T Consensus 538 ~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQr 617 (709)
T COG2274 538 NDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQR 617 (709)
T ss_pred HhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+|||||+++|+||||||||||||++||+.|.+.|.+..+|||+|+||||++++++||||+|||+|+|+|+|+|+||++.
T Consensus 618 lalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~ 697 (709)
T COG2274 618 LALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ 697 (709)
T ss_pred HHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCchhHHHHHhhh
Q 000687 1310 NPDGCYARMIQLQR 1323 (1350)
Q Consensus 1310 ~~~g~y~~l~~~q~ 1323 (1350)
+|.|+++|+.|.
T Consensus 698 --~g~y~~l~~~q~ 709 (709)
T COG2274 698 --GGLYARLYQQQE 709 (709)
T ss_pred --cChHHHHHhccC
Confidence 899999998763
No 14
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.9e-87 Score=900.12 Aligned_cols=570 Identities=30% Similarity=0.482 Sum_probs=494.1
Q ss_pred hHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.+.+++++++++++ .++++++++++.+.+.|++|++++.+++.+... .........+++++++++++.+++.+++
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDF----ANLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666665544 367788888899999999999999999876421 1112223446677777788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDT--EVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (1350)
.++..++++++..++|.++|++++++|++|||+ + ++|++++|+++|++.+++++...+..++..++.++++++++++
T Consensus 887 ~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~-~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~ 965 (1466)
T PTZ00265 887 NYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKH-APGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFY 965 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986 5 8999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHchHHHHHHhccHH
Q 000687 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLA-GK-----------------SQEALSQAGNIVEQTVVQIRVVFAFVGES 307 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~ 307 (1350)
++|.+++++++++|++ ...+.++.+... .+ .++..++.+..++|+++|+++||+|+.|+
T Consensus 966 ~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~ 1042 (1466)
T PTZ00265 966 FCPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLED 1042 (1466)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchH
Confidence 9999988766544433 333333332211 11 23345677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 308 KALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPS 387 (1350)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~ 387 (1350)
.+.++|.+..+...+...+.....++..++..++.++..++++|+|++++.+|.+++|.++++++++++...++..+...
T Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~ 1122 (1466)
T PTZ00265 1043 YFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSL 1122 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888888888888999999999999999999999999877766665667888889
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCCCcc---CCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcC
Q 000687 388 ISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLE---LDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGS 464 (1350)
Q Consensus 388 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~ 464 (1350)
+..+++++++++|++++++.+++++..+..+.. ++...|.|+|+||+|+||++++.++|+|+||+|++|+++|||||
T Consensus 1123 ~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~ 1202 (1466)
T PTZ00265 1123 KGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGE 1202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECC
Confidence 999999999999999999987654221111111 12345789999999999876556899999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCC------------------------------------------------------CCcEEEEC
Q 000687 465 SGSGKSTVVSLIERFYDP------------------------------------------------------TSGQVLLD 490 (1350)
Q Consensus 465 sGsGKSTl~~ll~~~~~~------------------------------------------------------~~G~i~i~ 490 (1350)
||||||||+++|+|+|+| ++|+|++|
T Consensus 1203 SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~id 1282 (1466)
T PTZ00265 1203 TGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLD 1282 (1466)
T ss_pred CCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEEC
Confidence 999999999999999999 69999999
Q ss_pred CeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 491 GHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 491 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
|+|+++++.+++|++||||+|||+||++||+|||.||+|+++++++++||+.+++++||.+||+||||.|||+|.+||||
T Consensus 1283 G~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGG 1362 (1466)
T PTZ00265 1283 GVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGG 1362 (1466)
T ss_pred CEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeC----CEEE-
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQ----GSVS- 643 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~----G~i~- 643 (1350)
|||||||||||+++|+||||||||||||+++|+.|+++|.++. +++|+|+||||++++++||+|+||++ |+++
T Consensus 1363 QkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~ 1442 (1466)
T PTZ00265 1363 QKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQ 1442 (1466)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEE
Confidence 9999999999999999999999999999999999999999984 69999999999999999999999999 9955
Q ss_pred EecChHHHHhccCCcHHHHHHHHH
Q 000687 644 EIGTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 644 ~~g~~~~l~~~~~~~~~~~l~~~~ 667 (1350)
|+|+|+||+++ .+|.|+++++.|
T Consensus 1443 e~Gth~eLl~~-~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1443 AHGTHEELLSV-QDGVYKKYVKLA 1465 (1466)
T ss_pred EecCHHHHHhc-CCChHHHHHhhc
Confidence 89999999973 179999998754
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.4e-87 Score=843.51 Aligned_cols=568 Identities=22% Similarity=0.268 Sum_probs=487.0
Q ss_pred hHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++++++|++++++ .+++++++.++..++.+..|++++.++|.+.....+. ..+..+...++++.++..++.+++
T Consensus 9 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 83 (588)
T PRK11174 9 LTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPR----EALLPPFILLILLFVLRALLAWLR 83 (588)
T ss_pred hhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888887754 4566777778888888888888999998754211111 112223333444455667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 247 (1350)
.++..+.+.++..++|.++|+|++++|.+||+++ ++|++++|+++|++.+++.+.+.+..++..++.+++.++++++++
T Consensus 84 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (588)
T PRK11174 84 ERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPIN 162 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000687 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|++++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+.
T Consensus 163 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 242 (588)
T PRK11174 163 WAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEV 242 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888999999999999999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLA---------IATMFAVMIGGLALAQAAPSISAFAKAKVAA 398 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 398 (1350)
.+......++..++..+..+++++++++.+. |.++.|.+ ++++.+......|+..+...+..+.+++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~ 321 (588)
T PRK11174 243 LRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAA 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666666655555555555556655543 77777754 1111222334568889999999999999999
Q ss_pred HHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000687 399 AKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIER 478 (1350)
Q Consensus 399 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 478 (1350)
+|+.++++.+++.+. ...........+.|+|+||+|.|++ ++++|+|+||+|++|+++|||||||||||||+++|+|
T Consensus 322 ~ri~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g 398 (588)
T PRK11174 322 ESLVTFLETPLAHPQ-QGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLG 398 (588)
T ss_pred HHHHHHHcCCCcccC-CCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 999999987654211 1110011112356999999987763 3479999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccc
Q 000687 479 FYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 479 ~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 558 (1350)
+| |++|+|++||+|+++++.+++|++|+||||||+||++||+|||++|+|++++++++++++.+++++++.+||+||||
T Consensus 399 ~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 399 FL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred CC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000687 559 QVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 559 ~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~ 638 (1350)
.+||+|.+|||||||||+|||||++||+|||||||||+||+++++.|+++|+++.+++|+|+||||+++++.||+|+||+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000687 639 QGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
+|+|+|.|+|+||+++ ++.|+++++.|.
T Consensus 558 ~G~i~e~G~~~eL~~~--~~~y~~l~~~q~ 585 (588)
T PRK11174 558 DGQIVQQGDYAELSQA--GGLFATLLAHRQ 585 (588)
T ss_pred CCeEeecCCHHHHHhc--chHHHHHHHHhh
Confidence 9999999999999987 789999998765
No 16
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.9e-86 Score=831.99 Aligned_cols=562 Identities=36% Similarity=0.576 Sum_probs=504.1
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
+++++.+.+ .+ .+.+++++.++........|.+++.++|.+.. +. .....+..+++++.++..++.++..
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~----~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA---DL----GELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655 34 55666777777777777777788888887651 11 1222233444445556677778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
++..+.+.++..++|.++|++++++|++||+++ ++|++++|+++|++.++..+.+....+...++.+++.+++++..+|
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSW 152 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888888899999999999999999999999998 8999999999999999999988866666678888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++..|++.+...++.++.++..+..++..++.++.+.|.++|+++||+|+.++.+.++|.+..++..+...+..
T Consensus 153 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (567)
T COG1132 153 RLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRAS 232 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888899999999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000687 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...+...++..++..+..++++++|++++.++.++.|.+++++.+......|+..+...+..++.+..+++|++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 312 (567)
T COG1132 233 RLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEE 312 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888888888999999999999999999999999999998888888899999999999999999999999999987
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000687 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
+++.+... ......+.|+|+||+|+|++ ++++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|+
T Consensus 313 ~~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 313 PEVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred ccccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 65432111 12234577999999999974 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
+||+|+++++.+++|++|+||||||+||++||+|||.+|+|+++++++++||+.+++++|++++|+||||.+||+|.+||
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LS 467 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLS 467 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~ 648 (1350)
||||||||||||+++||||||||||||+||++||+.|++++.++.++||+|+||||++++++||+|+||++|+|+|.|+|
T Consensus 468 gGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h 547 (567)
T COG1132 468 GGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTH 547 (567)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHHH
Q 000687 649 DELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 649 ~~l~~~~~~~~~~~l~~~~~ 668 (1350)
+||+++ +|.|+++|+.|.
T Consensus 548 ~eLl~~--~g~y~~l~~~~~ 565 (567)
T COG1132 548 EELLAK--GGLYARLYQAQG 565 (567)
T ss_pred HHHHHc--CCHHHHHHHHhh
Confidence 999998 899999998765
No 17
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.5e-86 Score=831.38 Aligned_cols=553 Identities=33% Similarity=0.528 Sum_probs=492.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 755 EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKR 834 (1350)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1350)
.+ .+.++.++.++..++....+++++.+++... .. ......+...++++.++..++.++..++..+.+.+...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-AD----LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55 5666666666777777777777777777655 11 122233444455555567777888888888888999999
Q ss_pred HHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 835 VREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPV 914 (1350)
Q Consensus 835 lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl 914 (1350)
+|.++|+++++.|++||++ +++|++++|+++|++.++..+......+...++.+++.+++++..+|.++++++..+|+
T Consensus 87 lr~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 164 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPL 164 (567)
T ss_pred HHHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999996 67999999999999999999999866666678888888999999999999999999888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000687 915 VVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQF 994 (1350)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1350)
+.+...+.....+...+..++..++..+.+.|.++|+++||+|+.++...+++.+..+...+...+.....+....+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (567)
T COG1132 165 LALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLL 244 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776665577788888888999999999999999999999999999999888888887777777777777788888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCC
Q 000687 995 CLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATP 1074 (1350)
Q Consensus 995 ~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~ 1074 (1350)
+..+..++.+++|.+++..+.+++|.+..++.+......++..+......+..+..+++|++++++.+++.+..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--- 321 (567)
T COG1132 245 LSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---
Confidence 99999999999999999999999999888888888888899999999999999999999999999986654322111
Q ss_pred CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh
Q 000687 1075 VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1075 ~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l 1154 (1350)
.....|+|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||++++.
T Consensus 322 -~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~ 398 (567)
T COG1132 322 -LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISL 398 (567)
T ss_pred -CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCH
Confidence 1234578999999999974 3579999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
++||++|++|||||+||+|||+|||++|+++++|||+++||+.++++|||+++|+||||.|||+|.+||||||||+||||
T Consensus 399 ~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 399 DSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIAR 478 (567)
T ss_pred HHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCch
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~ 1314 (1350)
|++++|||||||||||+||++||+.|++++++..+|||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~--~g~ 556 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK--GGL 556 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc--CCH
Confidence 999999999999999999999999999999988899999999999999999999999999999999999999998 899
Q ss_pred hHHHHHhhh
Q 000687 1315 YARMIQLQR 1323 (1350)
Q Consensus 1315 y~~l~~~q~ 1323 (1350)
|++||+.|.
T Consensus 557 y~~l~~~~~ 565 (567)
T COG1132 557 YARLYQAQG 565 (567)
T ss_pred HHHHHHHhh
Confidence 999999875
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.9e-85 Score=839.71 Aligned_cols=566 Identities=33% Similarity=0.504 Sum_probs=501.9
Q ss_pred ccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 85 TPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASS 164 (1350)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1350)
....++++++|.++. +..+++++++.++..++....|++.+.++|.+.... +.+.+ .....+++++.++..++.
T Consensus 145 ~~~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~ 218 (711)
T TIGR00958 145 TADLLFRLLGLSGRD-WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK-GPPAL----ASAIFFMCLLSIASSVSA 218 (711)
T ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHH----HHHHHHHHHHHHHHHHHH
Confidence 345677888888765 445566777777777788888888999999765321 11111 122233344455566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 165 WAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF 244 (1350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 244 (1350)
+++.+++.+.+.++..++|.++|++++++|++||++. ++|++++|+++|++.+++.+...+..++.+++.+++.+++++
T Consensus 219 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~ 297 (711)
T TIGR00958 219 GLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFML 297 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999988 999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 000687 245 SAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLG 324 (1350)
Q Consensus 245 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~ 324 (1350)
+++|++++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+..
T Consensus 298 ~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 377 (711)
T TIGR00958 298 WLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLN 377 (711)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRI 404 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 404 (1350)
.+.....+....+..++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..+++++.+.+|++++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~ 457 (711)
T TIGR00958 378 KRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEY 457 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666666666666677778888999999999999999999998888888889999999999999999999999999
Q ss_pred HccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000687 405 IDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 405 l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
++.+++.+.. ....+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 458 l~~~~~~~~~--~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 458 LDRKPNIPLT--GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred hCCCCCCCCC--CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 9887654221 11112234578999999999986555689999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCC
Q 000687 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g 564 (1350)
|+|++||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.++++++++++.+++++++.++|+|+||.+||+|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000687 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~ 644 (1350)
.+|||||||||+||||++++|+|||||||||+||+++++.+++ . ...+++|+|+||||++++..||+|+||++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998 3 3347899999999999999999999999999999
Q ss_pred ecChHHHHhccCCcHHHHH
Q 000687 645 IGTHDELIAKGENGVYAKL 663 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~~~~l 663 (1350)
+|+|+||+++ ++.|+++
T Consensus 694 ~Gt~~eL~~~--~~~y~~l 710 (711)
T TIGR00958 694 MGTHKQLMED--QGCYKHL 710 (711)
T ss_pred eeCHHHHHhC--CCchHhc
Confidence 9999999987 6888875
No 19
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.7e-85 Score=825.71 Aligned_cols=568 Identities=22% Similarity=0.292 Sum_probs=481.1
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++++.++.++.++++++++++.+++..+.++++..+++.....+.. ......+..+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677788888888888888888888888888888888765422111 11122334445556666778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 904 (1350)
...+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|++
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999985 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++......+..+...++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+....
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887777767777777777788888999999999999999999999999999999988887777666666
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKT---------IRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv 1055 (1350)
......+...+..+..+++.+++++... |.+++|.+ +.+.++......++..+......+.++..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555544444445544433 66666643 1111223344567788888888999999999999
Q ss_pred HHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000687 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~ 1135 (1350)
.++++.+++.++... ...+....+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~~~--~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 325 VTFLETPLAHPQQGE--KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HHHHcCCCcccCCCc--cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 999987654221111 1111112457999999998864 357999999999999999999999999999999999999
Q ss_pred CCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccc
Q 000687 1136 EPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFV 1215 (1350)
Q Consensus 1136 ~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~v 1215 (1350)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+++|+++|||+++|++.|++++||.++|+||||.|
T Consensus 401 -p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~v 479 (588)
T PRK11174 401 -PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPI 479 (588)
T ss_pred -CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCC
Q 000687 1216 GERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDG 1295 (1350)
Q Consensus 1216 ge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G 1295 (1350)
||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+||+|+||++|
T Consensus 480 ge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G 559 (588)
T PRK11174 480 GDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDG 559 (588)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEeeecChhHHhhcCCCchhHHHHHhhhh
Q 000687 1296 KVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1296 ~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
+|+|.|+|+||+++ +|.|+++++.|..
T Consensus 560 ~i~e~G~~~eL~~~--~~~y~~l~~~q~~ 586 (588)
T PRK11174 560 QIVQQGDYAELSQA--GGLFATLLAHRQE 586 (588)
T ss_pred eEeecCCHHHHHhc--chHHHHHHHHhhc
Confidence 99999999999987 7999999988753
No 20
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.1e-84 Score=830.20 Aligned_cols=565 Identities=32% Similarity=0.524 Sum_probs=501.3
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
..+++++++.++.+..+..++++.++..++....+++.+.+++........ .......++++++.++..++.+++.+
T Consensus 147 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (711)
T TIGR00958 147 DLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRGG 223 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777788888888888888888888888888888888876532211 11222333444555667788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 902 (1350)
++.+++.++..++|.++|++++++|+.||++ +++|++++|+++|++.+++.+...+..++.+++.+++.+++++.++|
T Consensus 224 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~ 301 (711)
T TIGR00958 224 SFNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSP 301 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
++++++++.+|+.++...+..++.+...++.++..++...++.|+++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 302 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 381 (711)
T TIGR00958 302 RLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKA 381 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888887777777777788888888889999999999999999999999999999999998888777776
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000687 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~ 1062 (1350)
...+....+...+..+..++.+++|.+++..|.++.|.++.+..+......++..+.....++.++..+.+|+.++++.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 461 (711)
T TIGR00958 382 LAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRK 461 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66666666666677777888899999999999999999999888888888999999999999999999999999999877
Q ss_pred cCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000687 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1142 (1350)
++.++.. ...+.+..|.|+|+||+|+||+++++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 462 ~~~~~~~---~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 462 PNIPLTG---TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCCCC---CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 6543211 1112234678999999999997666789999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCC
Q 000687 1143 MIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1143 ~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
++||+|+++++.+++|++|+||||||++|+|||||||.++.++++|+++++|++.++++++|+++|+||||.+||+|.+|
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecC
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt 1302 (1350)
|||||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||++++..||+|+||++|+|+|+|+
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 9999999999999999999999999999999999999999 33457899999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHH
Q 000687 1303 HSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~ 1319 (1350)
|+||+++ +|.|++|+
T Consensus 697 ~~eL~~~--~~~y~~lv 711 (711)
T TIGR00958 697 HKQLMED--QGCYKHLV 711 (711)
T ss_pred HHHHHhC--CCchHhcC
Confidence 9999987 78999874
No 21
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.7e-83 Score=824.93 Aligned_cols=564 Identities=27% Similarity=0.329 Sum_probs=497.5
Q ss_pred chHHHHHHh-hChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 87 VGLGELFRF-ADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 87 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
..+++++++ +++.+ ..++..++++++..++....|++++.++|.+.... +. ..+..+++.++++.++.+++.+
T Consensus 121 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~ 194 (686)
T TIGR03797 121 LGLRDLLRFALRGAR-RDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA-DR----SLLVQIALALLAAAVGAAAFQL 194 (686)
T ss_pred ccHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666 44443 33445555666666666667777888888765321 11 1222234444445556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~ 245 (1350)
++.++....+.++..++|..+|+|++++|+.||+++ ++|++++|++ |++.+++.+...+...+.++..+++.++++++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (686)
T TIGR03797 195 AQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFY 272 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999988 9999999997 89999999988888888888888888899999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000687 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|++++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...
T Consensus 273 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 352 (686)
T TIGR03797 273 YSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLEL 352 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+..........+..++..+..++++|+|++++.+|.+|.|.++++..+......|+.++...+..+++++.+.+|+.+++
T Consensus 353 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 432 (686)
T TIGR03797 353 SAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPIL 432 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88888888777777777888889999999999999999999999988888888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000687 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+.+++.+. .........+.|+|+||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|
T Consensus 433 ~~~~e~~~---~~~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 508 (686)
T TIGR03797 433 EALPEVDE---AKTDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESG 508 (686)
T ss_pred cCCccccc---CcCCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC
Confidence 87665321 111122345689999999999743 35799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCC
Q 000687 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~ 565 (1350)
+|++||+|+++++.+++|++||||||||++|++||+|||.+|+| +++++++++++.+++++++.++|+|+||.+||+|.
T Consensus 509 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~ 587 (686)
T TIGR03797 509 SVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGG 587 (686)
T ss_pred EEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCC
Confidence 99999999999999999999999999999999999999999998 89999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
+|||||||||+|||||+++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||+++++.||+|+||++|+|+|.
T Consensus 588 ~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~ 665 (686)
T TIGR03797 588 TLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQ 665 (686)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999886 6899999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHH
Q 000687 646 GTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~~~~ 667 (1350)
|+|+||+++ ++.|+++++.|
T Consensus 666 G~~~~Ll~~--~~~y~~l~~~q 685 (686)
T TIGR03797 666 GTYDELMAR--EGLFAQLARRQ 685 (686)
T ss_pred CCHHHHHhC--CcHHHHHHHhc
Confidence 999999987 79999998754
No 22
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-83 Score=828.12 Aligned_cols=565 Identities=26% Similarity=0.360 Sum_probs=498.1
Q ss_pred chHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++.+++++++ .++..++++++..++....|++++.++|.+.... . ...+..++..++++.++..++.++
T Consensus 142 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~ 215 (708)
T TIGR01193 142 NSLLKFIPLITRQKK-LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK-M----MGTLGIISIGLIIAYIIQQILSYI 215 (708)
T ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457778888776544 3445555566666666677778888898765321 1 112222333344445556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (1350)
+.++..+.+.++..++|.++|+|++++|+.||++. ++|++++|++ |++.+++++...+...+.+++.+++.+++++++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (708)
T TIGR01193 216 QIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQ 293 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988 9999999998 999999999888888888888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000687 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|++++++++.+|+++++..++.++.++..++.++..++..+.+.|+++|+++||+||.|+.+.++|.+...+..+...+
T Consensus 294 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 373 (708)
T TIGR01193 294 NMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFK 373 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.....+....+..++..+..++++++|++++.+|.+|.|.++++..+......|+.++...+..++.++.+.+|+.++++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 453 (708)
T TIGR01193 374 YQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYL 453 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 87777777777777777788889999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000687 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.++|.+... .....+...|.|+++||+|+|++ ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+
T Consensus 454 ~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 454 VDSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 766542211 10112234578999999999973 347999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcC-CCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCC
Q 000687 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLG-RPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGV 565 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~ 565 (1350)
|++||+|+++++.+++|++||||||||+||++||+|||.+| .+++++++++++++.+++++++.++|+||||.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999999 57889999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
+|||||||||+||||++++|+|||||||||+||+++|+.+++.|+++ +++|+|+||||+++++.||+|++|++|++++.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999885 68999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHH
Q 000687 646 GTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~~ 665 (1350)
|+|+||+++ ++.|+++++
T Consensus 690 G~~~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDR--NGFYASLIH 707 (708)
T ss_pred CCHHHHHhc--CCcHHHHhh
Confidence 999999987 789998874
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9e-83 Score=799.47 Aligned_cols=567 Identities=23% Similarity=0.278 Sum_probs=490.0
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++++++|.+++++ .++++++++++...+....|.+++.++|................ .....+++++++..++.++..
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYM-LPAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHH-hHHHHHHHHHHHHHHHHHHHH
Confidence 5567777776644 45566667766666666677778888886431111000000111 112223344556677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
++..+.+.++..++|.++|+|++++|+.+|++. ++|++++|+++|++.+++++.+.+..++..++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAV-IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
++++++++++|++++ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888887655 4567778888888889999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAV-MIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
....+...++..++..+..++++++|++++ +|.++.|.+++++.+. .....++..+...+..++++.++++|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888888888888899999985 7889999988876554 33345677778888999999999999999999
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000687 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+.... .......+.|+|+||+|+|++. ++++|+|+||++++||++|||||||||||||+++|+|+|+|++|+
T Consensus 320 ~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 8765322111 1112234679999999999753 246999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCC
Q 000687 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~ 566 (1350)
|++||+|+++++.+++|++|+||||||++|++||+|||++++|++++++++++++.+++++++.+ |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999 99999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
|||||||||+||||++++|+|||||||||+||+++++.+++.|.++.+++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000687 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l~~ 665 (1350)
+|+||+++ ++.|+++++
T Consensus 556 ~~~~l~~~--~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQ--QGRYYQLKQ 572 (574)
T ss_pred CHHHHHhc--CcHHHHHHh
Confidence 99999987 799999885
No 24
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.6e-83 Score=819.44 Aligned_cols=553 Identities=25% Similarity=0.329 Sum_probs=489.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 754 PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTK 833 (1350)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1350)
+.++.+...++++++..++....+++...+++....... ......+.+.++++.++..++.+++.++...++.++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (686)
T TIGR03797 133 GARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDA 209 (686)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444445555556666666666667777777765542211 11223344455556667788899999999999999999
Q ss_pred HHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 834 RVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFP 913 (1350)
Q Consensus 834 ~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~p 913 (1350)
++|..+|+++++.|+.||++ +++|++++|+. |++.+++.+...+...+.+.+.++++++++++++|++++++++++|
T Consensus 210 ~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 286 (686)
T TIGR03797 210 SLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALAL 286 (686)
T ss_pred HHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 78999999997 8999999999888888888888888899999999999999999998
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000687 914 VVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQ 993 (1350)
Q Consensus 914 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1350)
+.++..++..+..+...++..+..++..+++.|+++|+++||+++.|+.+.++|.+..++..+...+..........+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 287 VAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777777777777888888888999999999999999999999999999999999998888888888888777888
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCC
Q 000687 994 FCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT 1073 (1350)
Q Consensus 994 ~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~ 1073 (1350)
++..+..++.+|+|++++..|.+++|.++++..+......++..+......+..+..+.+|+.++++.+++.+...
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---- 442 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---- 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc----
Confidence 8888889999999999999999999999998888888889999999999999999999999999998765533211
Q ss_pred CCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC
Q 000687 1074 PVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN 1153 (1350)
Q Consensus 1074 ~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~ 1153 (1350)
..+....|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1112345789999999999753 357999999999999999999999999999999999999999999999999999999
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
.+++|++|+||||||+||+|||||||.+++| ++|+++++|++.++++++|.++|+||||.+||+|.+|||||||||+||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999988 999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDG 1313 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g 1313 (1350)
|||+++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||+++ +|
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~--~~ 676 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR--EG 676 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC--Cc
Confidence 9999999999999999999999999999999886 6899999999999999999999999999999999999987 79
Q ss_pred hhHHHHHhh
Q 000687 1314 CYARMIQLQ 1322 (1350)
Q Consensus 1314 ~y~~l~~~q 1322 (1350)
.|++|++.|
T Consensus 677 ~y~~l~~~q 685 (686)
T TIGR03797 677 LFAQLARRQ 685 (686)
T ss_pred HHHHHHHhc
Confidence 999999865
No 25
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-85 Score=832.92 Aligned_cols=650 Identities=20% Similarity=0.255 Sum_probs=507.5
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCC----CCCcchhhc-ccchhhh----h-----hcccCCCCC
Q 000687 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYA----NPSPQAQAQ-ETTTTTK----R-----QMENNSSSS 70 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~----~-----~~~~~~~~~ 70 (1350)
.||++|++++ |.| +|+||+|+++|+|.+..+....+. +...++.+. +.....+ . ..+..+...
T Consensus 700 THql~~L~~a--d~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1381)
T KOG0054|consen 700 THQLQFLPHA--DQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEE 777 (1381)
T ss_pred eCchhhhhhC--CEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccc
Confidence 5999999999 999 999999999999987764432221 111111110 0000000 0 000000000
Q ss_pred CC-------CCCCCCCCCCCCccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcCCCCchhHH
Q 000687 71 SS-------AANSEPKKPSDVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFF-ADLVNSFGSNVNNMDKM 142 (1350)
Q Consensus 71 ~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~ 142 (1350)
+. ......++++..+.+.+..+..|++....+...+.+++..+..........+| ..+.+.-.......
T Consensus 778 ~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~--- 854 (1381)
T KOG0054|consen 778 EKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT--- 854 (1381)
T ss_pred cccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC---
Confidence 00 00011122335788999999999987333333333334444444444444444 44433211100000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHH
Q 000687 143 MQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAI 222 (1350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~ 222 (1350)
.....+..+|.+++++..++.+++.+.+...+.+.+++|+.+++++++|.||+|||++ |+|+|+||+++|++.+++.+
T Consensus 855 -~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~L 932 (1381)
T KOG0054|consen 855 -VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLL 932 (1381)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhh
Confidence 0122356677778888888888999999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHH
Q 000687 223 SEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFA 302 (1350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~ 302 (1350)
+..+..++..++.+++.++++.+..|+++++++.+..+++++..+|.+..|++.+.....++++.+++.|++.|+.|||+
T Consensus 933 p~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRA 1012 (1381)
T KOG0054|consen 933 PFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRA 1012 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Q 000687 303 FVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALA 382 (1350)
Q Consensus 303 f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~ 382 (1350)
|+.|+++.+++....+.+.+..+......-+..--..++..+..... .+-+.+...+..+.|.+--.+.+.+.....++
T Consensus 1013 f~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~-al~~vl~~~~~~~~g~vGLslsyal~lt~~l~ 1091 (1381)
T KOG0054|consen 1013 FGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIA-ALFAVLLPSGLISPGLVGLSLSYALQLTGLLQ 1091 (1381)
T ss_pred ccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHccCCCCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999888765443332222222222222221111 11111222222444544333444455555689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEE
Q 000687 383 QAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIA 460 (1350)
Q Consensus 383 ~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 460 (1350)
++.....++++.++|+|||.++.+.++|.+...+...+++ +.+|.|+|+|++.+|..+ .++|||||||+|+|||++|
T Consensus 1092 ~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVG 1170 (1381)
T KOG0054|consen 1092 WLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVG 1170 (1381)
T ss_pred HHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEE
Confidence 9999999999999999999999997766222111221222 457999999999999643 3579999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHH
Q 000687 461 LVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAA 540 (1350)
Q Consensus 461 ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~ 540 (1350)
|||++|||||||+++|.|+.+|.+|+|.|||.||.++++++||++++++||||.||+||+|.|+.... +.+|+++|+|+
T Consensus 1171 IVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~AL 1249 (1381)
T KOG0054|consen 1171 IVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEAL 1249 (1381)
T ss_pred EeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999997654 47889999999
Q ss_pred HHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEE
Q 000687 541 RVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV 620 (1350)
Q Consensus 541 ~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 620 (1350)
+.|++.+++.++|.|+|+.|.|+|.|+|-||||.+||||||+++++||+||||||++|++|+..||++|++..++||||.
T Consensus 1250 e~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVlt 1329 (1381)
T KOG0054|consen 1250 ERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLT 1329 (1381)
T ss_pred HHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHH
Q 000687 621 IAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 621 itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~ 666 (1350)
||||++|+.++|||+|||+|+|+|.|+|.+|++++ ++.|++++.+
T Consensus 1330 IAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~-~S~f~~~l~~ 1374 (1381)
T KOG0054|consen 1330 IAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDK-DSLFSSLLKE 1374 (1381)
T ss_pred EeeccchhhhcCeEEEeeCCeEeecCChHHHHhCC-cchHHHHHHH
Confidence 99999999999999999999999999999999874 6777655543
No 26
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.3e-83 Score=823.52 Aligned_cols=565 Identities=25% Similarity=0.314 Sum_probs=496.4
Q ss_pred chHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..++.++++++++++ .+...++++++..++....|++++.++|....... . ..+..++..++++.++.+++.++
T Consensus 140 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~----~~l~~~~~~~~~~~~~~~~~~~~ 213 (710)
T TIGR03796 140 SLLRALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-Q----DWLRPLLLGMGLTALLQGVLTWL 213 (710)
T ss_pred ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-h----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777766543 33444555555555555666778888887653211 1 11222333344445566778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (1350)
+.++....+.++..++|.++|+|++++|++||+++ ++|++++|+++| +.+++++...+...+.+++.+++.+++++++
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 291 (710)
T TIGR03796 214 QLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988 999999999988 6899999988999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000687 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|++++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||++++|+.+.++|.+...+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
......+...+..++..+..++++++|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 372 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 451 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLR 451 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88887777777777888888899999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCC---C-CccC-CCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000687 407 HKPSIDRNSE---S-GLEL-DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD 481 (1350)
Q Consensus 407 ~~~~~~~~~~---~-~~~~-~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 481 (1350)
.+++.+.... . .... +...+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+
T Consensus 452 ~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~ 530 (710)
T TIGR03796 452 NPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ 530 (710)
T ss_pred CCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 7665422110 0 0111 2335789999999999853 3579999999999999999999999999999999999999
Q ss_pred CCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCcccccc
Q 000687 482 PTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVG 561 (1350)
Q Consensus 482 ~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~ 561 (1350)
|++|+|++||+|+++++.+++|++||||||+|++|++||+|||.++.|++++++++++++.+++++++.++|+|+||.+|
T Consensus 531 p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~ 610 (710)
T TIGR03796 531 PWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELA 610 (710)
T ss_pred CCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceec
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000687 562 ERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 562 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~ 641 (1350)
|+|.+|||||||||+|||||+++|+|||||||||+||+++|+.|.+.|++ .++|+|+||||+++++.||+|++|++|+
T Consensus 611 e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 611 EGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred cCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999999986 5899999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHH
Q 000687 642 VSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
|++.|+|+||+++ ++.|++++
T Consensus 689 i~~~G~~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 689 VVQRGTHEELWAV--GGAYARLI 709 (710)
T ss_pred EEEecCHHHHHHc--CCcHHHHh
Confidence 9999999999987 78898876
No 27
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-86 Score=735.40 Aligned_cols=551 Identities=27% Similarity=0.383 Sum_probs=467.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHH-HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 109 LGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQE-VLKYAFYFLVV--GAAIWASSWAEISCWMWTGERQSIKMRIK 185 (1350)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lR~~ 185 (1350)
++..+.-+.....|.+.+.++|.+... ..+... +..+.++.++- +.+..+++-+++++|..+.+-..+++-..
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~ltap----~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~ 297 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTAP----DTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETE 297 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcCc----chhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHH
Confidence 333333344445566677777776531 111111 11111111111 22235667778888888888899999999
Q ss_pred HHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHH
Q 000687 186 YLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF-SAVWQLALVTLAVVPLIAVI 264 (1350)
Q Consensus 186 ~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~l~lv~l~~~pl~~~~ 264 (1350)
+|+|+..+++.|+-++ ++|+++.-+....+.+. ++...+.++...+.-+.++++..+ .++|++++++++++.++...
T Consensus 298 lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~ 375 (790)
T KOG0056|consen 298 LFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYV 375 (790)
T ss_pred HHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhhe
Confidence 9999999999999888 99999998888777765 555555555555555555554443 46999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 265 GAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFC 344 (1350)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (1350)
......+..+..+++.....+......+++-|.+|||.||+|+++.++|.+++.++.+..+|......+.......+..+
T Consensus 376 Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l 455 (790)
T KOG0056|consen 376 TIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL 455 (790)
T ss_pred eeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 77777777777888888888888889999999999999999999999999999999999888776666655555555555
Q ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCC
Q 000687 345 SYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSV 424 (1350)
Q Consensus 345 ~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~ 424 (1350)
+.+..-.+.+|+|..+.+++|+.+.+..|++...+|+++....+..+++..+-+|++++++++++|+.+.+ ...+....
T Consensus 456 gll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~pl~~~ 534 (790)
T KOG0056|consen 456 GLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPPLKVT 534 (790)
T ss_pred HHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCCcccc
Confidence 55555556667788899999999999999999999999999999999999999999999999988875432 23334456
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQ 504 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~ 504 (1350)
+|.|+|+||+|.|. +.+++|+||||+++||+++|+|||||+||||++++|.|||+.++|.|.|||+||++....++|+
T Consensus 535 ~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs 612 (790)
T KOG0056|consen 535 QGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRS 612 (790)
T ss_pred CCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHH
Confidence 79999999999997 4568999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 505 QIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
+||+||||..||++||..||.|++|.+++||+.+|++.|++||.|.++|+||+|.|||+|-.|||||||||||||+++++
T Consensus 613 ~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~ 692 (790)
T KOG0056|consen 613 SIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKA 692 (790)
T ss_pred hcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
|.|++|||+|||||..||+.||.+|.++..+||.|+|+|||+|+-+||.|+|+++|+|+|.|+|+||+.+ ++|.|++||
T Consensus 693 P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~r-dgG~Ya~MW 771 (790)
T KOG0056|consen 693 PSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKR-DGGAYADMW 771 (790)
T ss_pred CcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhc-cCCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 489999999
Q ss_pred HHHHH
Q 000687 665 RMQEA 669 (1350)
Q Consensus 665 ~~~~~ 669 (1350)
+.|..
T Consensus 772 q~qqa 776 (790)
T KOG0056|consen 772 QAQQA 776 (790)
T ss_pred HHHHh
Confidence 87654
No 28
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-82 Score=817.14 Aligned_cols=557 Identities=26% Similarity=0.362 Sum_probs=492.0
Q ss_pred chHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++++++++++ .+...++++++..++....|++++.++|...... +. ..+..+.+.++++.++..++.++
T Consensus 133 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~ 206 (694)
T TIGR03375 133 RPKHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQ-AF----ETLWVLAIGVALAIVFDFVLKTL 206 (694)
T ss_pred ccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cH----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777766543 3445555556666666677777888888764321 11 11222333333444556778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (1350)
+.++..+.+.++..++|..+|+|++++|+.| +++ ++|++++|+ +|++.+++++...+...+.++..+++.+++++++
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (694)
T TIGR03375 207 RSYFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 666 899999999 7999999999888888888888888888899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000687 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|++++++++.+|+++++..++.++.++..++..+..++..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.....+....+..++..++.++++++|++++.+|.+|.|.+++++.+......|+..+...+..++.++.+.+|+.++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 443 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQ 443 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888888888888889999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000687 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+.. ......+...+.|+|+||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+
T Consensus 444 ~~~e~~~~-~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~ 521 (694)
T TIGR03375 444 LPVERPEG-TRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGS 521 (694)
T ss_pred CCCCCCCC-CCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 87653221 1111112345789999999999743 357999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCC
Q 000687 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~ 566 (1350)
|.+||+|+++++.+++|++|+||||+|++|++||+|||.+++|++++++++++++.+++++++.++|+||||.+||+|.+
T Consensus 522 I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
|||||||||+||||++++|+|||||||||+||+++|+.|++.|.++.+++|+|+||||+++++.||+|++|++|+|+|.|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhc
Q 000687 647 THDELIAK 654 (1350)
Q Consensus 647 ~~~~l~~~ 654 (1350)
+|+||+++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999875
No 29
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.6e-82 Score=818.72 Aligned_cols=563 Identities=23% Similarity=0.376 Sum_probs=495.2
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++.+.++.+..+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666666666666667777777788877776543221 11222233344455566778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 904 (1350)
.+++.++..++|.++|+++++.|+.||++ +++|++++|++ |.+.+++.+...+...+.+++.+++.++++++++|++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999986 78999999998 9999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|++++..++..+..++..++..+..++..+.+.|+++|+++||+++.|+.+.++|.+...+..+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888888888888899999999999999999999999999999999998888888887777
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000687 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~ 1064 (1350)
.+....+..++..+..++++|+|++++..|.+++|.++++..+......++..+......+..+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77777777777778888999999999999999999999988888888999999999999999999999999999987765
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEE
Q 000687 1065 IEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMI 1144 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1144 (1350)
.+..... ...+...|.|+|+||+|+|++ ++++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++
T Consensus 458 ~~~~~~~--~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~i 533 (708)
T TIGR01193 458 FINKKKR--TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 (708)
T ss_pred ccccccc--cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Confidence 4322110 111234678999999999974 347999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccC-CCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1145 DGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYG-HESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1145 dG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~-~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
||+|+++++.+++|++|+||||||+||+|||||||.++ .++++|+++++|++.++++++|.++|+||||.+||+|.+||
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999998 57899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||||||+||||++++|+|||||||||+||++||+.|++.|++. +|+|+|+||||++++..||+|+||++|+++|.|+|
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~ 692 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSH 692 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999875 78999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHH
Q 000687 1304 SHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~ 1320 (1350)
++|+++ +|.|++||+
T Consensus 693 ~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 693 DELLDR--NGFYASLIH 707 (708)
T ss_pred HHHHhc--CCcHHHHhh
Confidence 999987 799999986
No 30
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=8.7e-83 Score=867.59 Aligned_cols=570 Identities=20% Similarity=0.251 Sum_probs=472.7
Q ss_pred CccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 84 VTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 84 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
.+.+.+..++.|++...+...++.+++.++...+....+++++.+.+........ .. ...+..++++++++..++
T Consensus 947 ~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~-~~----~~~~~~iy~~l~i~~~~~ 1021 (1522)
T TIGR00957 947 TGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQ-NN----TSLRLSVYGALGILQGFA 1021 (1522)
T ss_pred cCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC-CC----cchHHHHHHHHHHHHHHH
Confidence 4456788888888654333322323333333333334445555555431110000 00 011333455666667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG 243 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (1350)
.++..+++.+.+.+...++|.++|++++++|++|||++ ++|+++||+++|++.+++.++..+..++..++.+++.++++
T Consensus 1022 ~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~ 1100 (1522)
T TIGR00957 1022 VFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVI 1100 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888899999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 000687 244 FSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRL 323 (1350)
Q Consensus 244 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~ 323 (1350)
++.+|++++++++++++++++..++.+..++..+......+++.+++.|+++|+++||+|++|+++.+++.+..+...+.
T Consensus 1101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~ 1180 (1522)
T TIGR00957 1101 LLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKA 1180 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99999888777777777777788888888888888888899999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 324 GYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVR-HHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIF 402 (1350)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 402 (1350)
.+.......+......++. .++++++|+..+. .|.++.|.+.+++.+......++.++...+..++.+++|++|+.
T Consensus 1181 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~ 1257 (1522)
T TIGR00957 1181 YYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLK 1257 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555444444333333322 2233444555554 57899999888888888888899999999999999999999999
Q ss_pred HHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 000687 403 RIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY 480 (1350)
Q Consensus 403 ~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~ 480 (1350)
++++.++|.+...+...+++ +.+|.|+|+||+|+|+++ ..++|+|+||+|++||++||||+||||||||+++|+|+|
T Consensus 1258 ~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~ 1336 (1522)
T TIGR00957 1258 EYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRIN 1336 (1522)
T ss_pred HHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCc
Confidence 99987665321111111111 346889999999999754 247999999999999999999999999999999999999
Q ss_pred CCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccc
Q 000687 481 DPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQV 560 (1350)
Q Consensus 481 ~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v 560 (1350)
+|++|+|+|||+|+++++.+++|++|+||||||.||+|||||||.... +++++++++|++.+++++++.++|+||||.+
T Consensus 1337 ~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v 1415 (1522)
T TIGR00957 1337 ESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHEC 1415 (1522)
T ss_pred cCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCcee
Confidence 999999999999999999999999999999999999999999998543 5889999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCC
Q 000687 561 GERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQG 640 (1350)
Q Consensus 561 ~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G 640 (1350)
||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||||+||++|
T Consensus 1416 ~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G 1495 (1522)
T TIGR00957 1416 AEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKG 1495 (1522)
T ss_pred cCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred EEEEecChHHHHhccCCcHHHHHHHH
Q 000687 641 SVSEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~~~~~~~~~l~~~ 666 (1350)
+|+|.|+|+||+++ ++.|++|++.
T Consensus 1496 ~IvE~G~~~eLl~~--~~~f~~l~~~ 1519 (1522)
T TIGR00957 1496 EVAEFGAPSNLLQQ--RGIFYSMAKD 1519 (1522)
T ss_pred EEEEECCHHHHHhC--CCHHHHHHHH
Confidence 99999999999987 6999999865
No 31
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-82 Score=813.82 Aligned_cols=562 Identities=24% Similarity=0.312 Sum_probs=489.6
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 747 RLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDI 826 (1350)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 826 (1350)
.++.+.++.+..+...++++++..++....+++...+++........ .....+...++++.++..++.+++.++...
T Consensus 144 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (710)
T TIGR03796 144 ALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ---DWLRPLLLGMGLTALLQGVLTWLQLYYLRR 220 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555455555555555555556666677666654322111 112223344455566678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 827 VGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLAL 906 (1350)
Q Consensus 827 ~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~l 906 (1350)
++.++..+++.++|+++++.|++||++ +++|++++|+..| ..+++++...+..++.+++.+++.++++++++|++++
T Consensus 221 ~~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 297 (710)
T TIGR03796 221 LQIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTL 297 (710)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 7899999999988 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 907 VLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAG 986 (1350)
Q Consensus 907 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 986 (1350)
++++.+|+.++..++..+..+...++..+...+..+.+.|+++|+++||+++.|+.+.++|.+...+..+...+......
T Consensus 298 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (710)
T TIGR03796 298 IGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQ 377 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777777777776777777888889999999999999999999999999999998888888888888888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Q 000687 987 SGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIE 1066 (1350)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~ 1066 (1350)
....+..++..+..++++|+|++++..|.+++|.++++..+......++..+......+..+..+++|+.++++.+++.+
T Consensus 378 ~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 457 (710)
T TIGR03796 378 ILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPL 457 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 77788888888889999999999999999999999998888888899999999999999999999999999998766543
Q ss_pred CCCC---CCCCCC-CCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000687 1067 PDDP---DATPVP-DRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1067 ~~~~---~~~~~~-~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1142 (1350)
.... .....+ +...|.|+|+||+|+|++. ++++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I 536 (710)
T TIGR03796 458 LEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEI 536 (710)
T ss_pred cccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 2210 000111 2345789999999999854 3579999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCC
Q 000687 1143 MIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1143 ~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
++||+|+++++.+++|++|+||||||.||+|||||||.++.++++++++++|++.++++++|.++|+||||.+||+|.+|
T Consensus 537 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~L 616 (710)
T TIGR03796 537 LFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANL 616 (710)
T ss_pred EECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecC
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt 1302 (1350)
|||||||||||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|.|+
T Consensus 617 SGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~ 694 (710)
T TIGR03796 617 SGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGT 694 (710)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999999999987 5899999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHH
Q 000687 1303 HSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~ 1319 (1350)
|+||+++ +|.|++|+
T Consensus 695 ~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 695 HEELWAV--GGAYARLI 709 (710)
T ss_pred HHHHHHc--CCcHHHHh
Confidence 9999987 79999987
No 32
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-81 Score=787.82 Aligned_cols=565 Identities=22% Similarity=0.313 Sum_probs=482.4
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 747 RLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHA-YMIREIAKYCYLLIGLSSAELLFNTLQHSFWD 825 (1350)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (1350)
+++++.++.++.+.++++++++..++....+++++.+++........ ........+...+++++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666677777777777777767777777777644311110 00001111222344455667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 826 IVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLA 905 (1350)
Q Consensus 826 ~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~ 905 (1350)
..+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|+++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 906 LVLIAVFPVVVAA-TVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 906 lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
+++++++|+++++ .++..+..+...++.++..++....+.|.++|+++||+|+.|+.+.++|.+..++..+...+....
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888876543 355556666667777888888999999999999999999999999999999999998888888888
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000687 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV-SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~ 1063 (1350)
.+....+..++..+..++++|+|.+++ .|.++.|.+++++.+... ...++..+......+.++..+++|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888888888888888899999884 788888887766555433 334555666777888899999999999998766
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000687 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.+..... . +....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 323 ~~~~~~~~--~-~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~ 398 (574)
T PRK11160 323 EVTFPTTS--T-AAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEIL 398 (574)
T ss_pred CCCCCccc--C-CCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 53211111 1 11235789999999999753 24799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||+||++||+|||.++.++++|+++++|++.+++++++++ |+||||.+||+|.+||
T Consensus 399 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 399 LNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred ECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 999999999999999999999999999999999999999988999999999999999999999 9999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
||||||+|||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHh
Q 000687 1304 SHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~ 1321 (1350)
+||+++ +|.|++||+.
T Consensus 558 ~~l~~~--~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ--QGRYYQLKQR 573 (574)
T ss_pred HHHHhc--CcHHHHHHhh
Confidence 999988 8999999863
No 33
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.7e-82 Score=860.04 Aligned_cols=571 Identities=18% Similarity=0.223 Sum_probs=441.0
Q ss_pred CCCccchHHHHHHhhChhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 000687 82 SDVTPVGLGELFRFADSLDYV-LMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAI 160 (1350)
Q Consensus 82 ~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1350)
+..+.+.+..+..|++...+. .+++.+++.++...+....++++..+.|..... ... ...+.+++++++++.
T Consensus 894 ~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~------~~~~~~i~~~l~~~~ 966 (1622)
T PLN03130 894 RETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-THG------PLFYNLIYALLSFGQ 966 (1622)
T ss_pred HhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCc------hhHHHHHHHHHHHHH
Confidence 345667888888887653222 222222222222233333344444444432111 110 112344556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 161 WASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGF 240 (1350)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~ 240 (1350)
.++.+++.+++.+.+.+...++|.++|++++++|++|||++ ++|+++||+++|++.+++.++..+..++..++.+++.+
T Consensus 967 ~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~ 1045 (1622)
T PLN03130 967 VLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTF 1045 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888889999999999999999999999999999998 99999999999999999999999999999999999888
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHH
Q 000687 241 AVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVA 320 (1350)
Q Consensus 241 i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~ 320 (1350)
+++++++|...++++++..+++++..++.+..++..+......+++.+++.|+++|++|||+|++++++.+++.+..+..
T Consensus 1046 i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~ 1125 (1622)
T PLN03130 1046 VLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN 1125 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 88888887443333222222333344555666777777777888999999999999999999999998777777666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 321 QRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHF---------TNGGLAIATMFAVMIGGLALAQAAPSISAF 391 (1350)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~---------~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~ 391 (1350)
.+..+.......+......+ +..+++++.+...+..+. .+.|.+++ +.+....++..+...+..+
T Consensus 1126 ~~~~~~~~~~~~wl~~~l~~---~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls---~~~~~~~~l~~l~~~~~~~ 1199 (1622)
T PLN03130 1126 IRFTLVNMSSNRWLAIRLET---LGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS---YALNITSLLTAVLRLASLA 1199 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHcccccccchhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 54433222221111111111 112222233333344321 12232222 3333444566777778888
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcH
Q 000687 392 AKAKVAAAKIFRIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGK 469 (1350)
Q Consensus 392 ~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 469 (1350)
+.+++|++|+.++++.++|.+...+...+++ +.+|.|+|+||+|+|+++ .++||+|+||+|++||++||||+|||||
T Consensus 1200 e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGK 1278 (1622)
T PLN03130 1200 ENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGK 1278 (1622)
T ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCH
Confidence 9999999999999988766422111111111 346889999999999643 3479999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHH
Q 000687 470 STVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFI 549 (1350)
Q Consensus 470 STl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i 549 (1350)
|||+++|+|+|+|++|+|+|||+|+++++++++|++|++|||||.||+|||||||.++. +++++++++|++.+++++++
T Consensus 1279 STLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I 1357 (1622)
T PLN03130 1279 SSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVI 1357 (1622)
T ss_pred HHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 47899999999999999999
Q ss_pred hcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhh
Q 000687 550 IKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIR 629 (1350)
Q Consensus 550 ~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~ 629 (1350)
.++|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|+++|++..+++|+|+||||++++.
T Consensus 1358 ~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~ 1437 (1622)
T PLN03130 1358 RRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTII 1437 (1622)
T ss_pred HhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred hcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000687 630 KADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 630 ~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~ 669 (1350)
+||||+||++|+|+|.|+|+||+++. ++.|++|++....
T Consensus 1438 ~~DrIlVLd~G~IvE~Gt~~eLl~~~-~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1438 DCDRILVLDAGRVVEFDTPENLLSNE-GSAFSKMVQSTGA 1476 (1622)
T ss_pred hCCEEEEEECCEEEEeCCHHHHHhCC-CCHHHHHHHHcCh
Confidence 99999999999999999999999862 6899999987554
No 34
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.3e-81 Score=791.63 Aligned_cols=566 Identities=32% Similarity=0.492 Sum_probs=494.9
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++.++++++++++. +++.+++.++..++....+.+++.++|....... .. .+....+.+++++++..++.+++.
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~---~~~~~~~~~~~~~l~~~~~~~~~~ 86 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD--RS---VLKWMPLVVIGLMILRGITSFISS 86 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--hh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566776665444 3444455555555555566677777776543111 11 111122223334555677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
++..+.+.++..++|..+|+++++.|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (582)
T PRK11176 87 YCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
++++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 166 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T PRK11176 166 QLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000687 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
........+..++..+..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+++++.+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~ 325 (582)
T PRK11176 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88777777777777788888899999999999999999988887777788899999999999999999999999999875
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000687 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+. .....++..+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 326 ~~~~~---~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 326 QEKDE---GKRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred CcCCC---CCcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 54221 111122234579999999999753 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCC-CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD-ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
+||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.+++++++.++|+|+||.+||+|.+|
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 999999999999999999999999999999999999999764 7899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|.|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHH
Q 000687 648 HDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l~~~~ 667 (1350)
|++|+++ ++.|+++++.|
T Consensus 562 ~~~l~~~--~~~y~~l~~~~ 579 (582)
T PRK11176 562 HAELLAQ--NGVYAQLHKMQ 579 (582)
T ss_pred HHHHHhC--CChHHHHHHHH
Confidence 9999987 78999998765
No 35
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.9e-81 Score=729.07 Aligned_cols=551 Identities=27% Similarity=0.355 Sum_probs=483.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 108 SLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYL 187 (1350)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~ 187 (1350)
.++..+.+++.....+++...++.+..... ...+..+...++++.++..++.+.+.......+.++...+|..++
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-----~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQL-----FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555556666665543211 223333444555556667788888888888999999999999999
Q ss_pred HHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000687 188 EAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAI 267 (1350)
Q Consensus 188 ~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~ 267 (1350)
+++.+++..|-.+. ++|+..+.+...++.++.+++..++.++...+..+..++.+|+++|.-++++++++|++.+++..
T Consensus 81 ~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 81 DKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999887 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 268 HATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYA 347 (1350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1350)
+++..++..+++...+..+++++-|.++|+.|+|+|+..+...+++.+..++.++..++.-++.-+...+..++.+++.+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888777776667777888888887
Q ss_pred HHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcc
Q 000687 348 LLLWYGGYLVRH-HFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSG 426 (1350)
Q Consensus 348 ~~~~~g~~lv~~-g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g 426 (1350)
++..+.+..... |.++....+.++...--.+.|+..+...++.-..+.++.++++.+++.+++..+.............
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 776666655566 7888877777666666677899999999999999999999999999887653221111011111223
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++|.||+.+ ++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||+++
T Consensus 320 ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 456669999998642 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000687 507 GLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPA 586 (1350)
Q Consensus 507 ~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~ 586 (1350)
+||+|+|+||++||||||+++++++++++++++++.+++.+++.. |+|+||.+||+|.+|||||+|||++||||+++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHH
Q 000687 587 ILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 587 illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~ 666 (1350)
++|||||||+||.+||+.|++.|.++.+++|+|+||||+..+.+||+|+|||+|+++|.|+|++|.++ +|.|++|+..
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l~~~ 554 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANLLKQ 554 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 8999999987
Q ss_pred HHH
Q 000687 667 QEA 669 (1350)
Q Consensus 667 ~~~ 669 (1350)
|..
T Consensus 555 q~~ 557 (559)
T COG4988 555 QEG 557 (559)
T ss_pred Hhc
Confidence 753
No 36
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-85 Score=722.69 Aligned_cols=505 Identities=30% Similarity=0.432 Sum_probs=431.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHH
Q 000687 813 ELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLV 892 (1350)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~ 892 (1350)
..+++-++.+++..+.+-.++++.-.+|+|+...++.|+-. ..+|+++.-+.+..+.+. ++...+..+...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 36777888888888999999999999999999999999975 678988887777666655 443333333333333333
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHH
Q 000687 893 ACTA-GFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNL 971 (1350)
Q Consensus 893 ~~~~-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~ 971 (1350)
+++. ...++||.+++++.+..+........--+..++.|.+.....+..+...+++-+.+|||-|++|++..++|.+.+
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 3332 234689988888877766655544333344445566666667777888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 972 QTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRA 1051 (1350)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1051 (1350)
.+.++..++......+.......+..+..++...+.++++..+..++|+++.+..+++...+|+.-+..+...+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99988777665555555555556666666666667777788888999999888888888888888888888899999999
Q ss_pred HHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHH
Q 000687 1052 MRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALV 1131 (1350)
Q Consensus 1052 ~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL 1131 (1350)
++++++++++++|.... ++.++-...+|.|+|+||+|.|. |++|||+||||++.||++||+|||||+||||++++|
T Consensus 509 mEnmfdllkee~eVvd~--P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlL 584 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDL--PGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLL 584 (790)
T ss_pred HHHHHHHhhcCchhhcC--CCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHH
Confidence 99999999887775422 12222223679999999999996 457999999999999999999999999999999999
Q ss_pred hccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCc
Q 000687 1132 QRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGY 1211 (1350)
Q Consensus 1132 ~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gl 1211 (1350)
+||||.++|.|+|||+||+++..++||++||+||||.+||+.||..||.|++|++++||+.+|++.|++||-|.++|+||
T Consensus 585 fRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY 664 (790)
T KOG0056|consen 585 FRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGY 664 (790)
T ss_pred HHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEE
Q 000687 1212 KTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAV 1291 (1350)
Q Consensus 1212 dt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~V 1291 (1350)
+|.|||+|-.||||||||+||||++|++|.|++||||||+||..||+.||.+|.+.+++||.|+||||||||.+||.|+|
T Consensus 665 ~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 665 NTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCEEeeecChhHHhhcCCCchhHHHHHhhhhc
Q 000687 1292 IDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1292 l~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+++|+|+|.|+|+||+++ ++|.|++||+.|+..
T Consensus 745 i~~G~IvErG~HeeLl~r-dgG~Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKR-DGGAYADMWQAQQAM 777 (790)
T ss_pred EeCCeEeecCcHHHHHhc-cCCcHHHHHHHHHhc
Confidence 999999999999999998 599999999987654
No 37
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.3e-81 Score=800.16 Aligned_cols=568 Identities=28% Similarity=0.402 Sum_probs=501.3
Q ss_pred chHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++++++++++ .+...++++++..++....|++++.++|.+.... +. ..+..+++.++++.++.+++.++
T Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~-~~----~~l~~l~~~~~~~~~~~~~~~~l 198 (694)
T TIGR01846 125 FGFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHR-GL----STLSVLALAMLAVAIFEPALGGL 198 (694)
T ss_pred CcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-Ch----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 457777777765543 3344555555555556666777888888765321 11 12222334444555566788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (1350)
+.++....+.++..++|.++|+|++++|+.||++. ++|++++|+ +|++.+++++...+...+.++..+++.+++++++
T Consensus 199 ~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 276 (694)
T TIGR01846 199 RTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFY 276 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988 999999999 6999999999888888887777777778899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000687 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|++++++++.+|+++++..++.+..++..++..+..++.++.+.|.++|+++||+||.|+.+.++|++..++..+...+
T Consensus 277 ~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 356 (694)
T TIGR01846 277 SPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFR 356 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988898888888888889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000687 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.....+....+..++..+..++++|+|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 357 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 436 (694)
T TIGR01846 357 VTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILN 436 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888887778888888888899999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000687 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+. ......+...+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+
T Consensus 437 ~~~e~~~--~~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~ 513 (694)
T TIGR01846 437 SPTEPRS--AGLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQ 513 (694)
T ss_pred CCCCccC--CCCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 7665321 1111122345789999999999743 346999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCC
Q 000687 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~ 566 (1350)
|++||+|+++++.+++|++|+||+|+|++|++||+|||.++.|+.++++++++++.+++++++.++|+|+||.+|++|.+
T Consensus 514 I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~ 593 (694)
T TIGR01846 514 VLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGAN 593 (694)
T ss_pred EEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCC
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|+|++.|
T Consensus 594 LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g 673 (694)
T TIGR01846 594 LSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESG 673 (694)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHHHH
Q 000687 647 THDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l~~~~ 667 (1350)
+|+||+++ ++.|+++++.|
T Consensus 674 ~~~~l~~~--~~~y~~l~~~~ 692 (694)
T TIGR01846 674 RHEELLAL--QGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHc--CChHHHHHHhh
Confidence 99999987 79999998754
No 38
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-80 Score=785.37 Aligned_cols=566 Identities=26% Similarity=0.356 Sum_probs=480.2
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
+++++.|.+++++ .+++.+++.++..++.+..|.+++.++|....... .. . .....+++.++++.++..++.+++.
T Consensus 11 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (592)
T PRK10790 11 LKRLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LP-L-GLVAGLAAAYVGLQLLAAGLHYAQS 86 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-h-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556555433 34556666677777777788888999987543211 11 1 1111122223334445666788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
+.....+.++..++|.++|+++++.|.++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (592)
T PRK10790 87 LLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDW 165 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999988 9999999999999999999999999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
++++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 166 ~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (592)
T PRK10790 166 RMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTL 245 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999899888888888888888888888888999999999999999999999999999999998888877766666
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000687 329 FAKGMG-LGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
...+.. ..+..++..+..++++++++. +..|.++.|.+++++.+......|+..+...+..+++++.+++|+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~ 324 (592)
T PRK10790 246 RLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDG 324 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 555443 233333333332333333344 578999999999998888888889999999999999999999999999986
Q ss_pred CCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000687 408 KPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
+++... .. ......+.|+++||+|+|++ +.++|+|+||++++||++||||+||||||||+++|+|+|+|++|+|
T Consensus 325 ~~~~~~--~~--~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I 398 (592)
T PRK10790 325 PRQQYG--ND--DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI 398 (592)
T ss_pred CCccCC--CC--ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE
Confidence 543211 11 11223467999999999974 3469999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
.+||+|+++++.+++|++|+||||||++|++||+|||.+|+ ++++++++++++.+++++++.++|+|+||.+||+|.+|
T Consensus 399 ~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~L 477 (592)
T PRK10790 399 RLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNL 477 (592)
T ss_pred EECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999998 58899999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.|.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 478 SGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~ 557 (592)
T PRK10790 478 SVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGT 557 (592)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHHH
Q 000687 648 HDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l~~~~~~ 669 (1350)
|+||+++ ++.|+++++.|..
T Consensus 558 ~~~L~~~--~~~y~~l~~~~~~ 577 (592)
T PRK10790 558 HQQLLAA--QGRYWQMYQLQLA 577 (592)
T ss_pred HHHHHhC--CCHHHHHHHHHhh
Confidence 9999987 7999999987644
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.2e-81 Score=802.16 Aligned_cols=553 Identities=24% Similarity=0.365 Sum_probs=485.3
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++.+.++.+..+...++++++..++....++++..+++........ .....+...++++.++..++.+++.++..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 138 FWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555566666666666677777777654422111 1122233344445566778889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.++..++|..+|+++++.|+.| ++ +++|++++|+ +|++.+++.+...+...+.+++.+++.++++++++|+++++
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~~--~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-RP--ASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-CC--CChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999998 43 6899999999 79999999999888888888888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++.+|+.++..++..+..++..++..+..++..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888887777777778888888889999999999999999999999999999999999998888888888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
...+.+.+..+..++.+|+|++++..|.+++|.++++..+......++..+.....++..+..+.+|+.++++.+++.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888889999999999999999999999998888888999999999999999999999999999988765332
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
... ....+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 451 ~~~--~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 GTR--FLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred CCC--CCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 111 11112345789999999999753 357999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1148 di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|+++++++++|++|+||||||++|+|||+|||.+++++++++|+++|++.++++++|.++|+||||.+||+|.+||||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHh
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|+||+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred hcC
Q 000687 1308 KNN 1310 (1350)
Q Consensus 1308 ~~~ 1310 (1350)
++.
T Consensus 688 ~~~ 690 (694)
T TIGR03375 688 EAL 690 (694)
T ss_pred HHh
Confidence 863
No 40
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-80 Score=722.48 Aligned_cols=551 Identities=26% Similarity=0.360 Sum_probs=487.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 763 SVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAA 842 (1350)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 842 (1350)
.+++.+.++.....+++++..+...+.... ......+...++++.++..++...+......++.++...+|+.++++
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666667777777766554321 23344455566667777888889999999999999999999999999
Q ss_pred HHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 843 VLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQ 922 (1350)
Q Consensus 843 ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 922 (1350)
+.+.+..|-.+ .|+|+..+.+...++.++.++...++....+.+..+..++.+++++|.-+++++.++|++.++.++.
T Consensus 83 l~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000687 923 KMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYAL 1002 (1350)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1350)
....+..+++.-..+...+.++.+.+.|+.|+|+|+..+...++..+...+..+.....-+..-....+..++.++..++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888899999999999999999999999999999988888888888877777777777788888888888
Q ss_pred HHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCC
Q 000687 1003 GLWYSSWLVKH-GISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRG 1081 (1350)
Q Consensus 1003 ~~~~g~~lv~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g 1081 (1350)
+..+.+..... |.+++...+.+++..--.+.|+-.+...++.-..+..+.+.++.+++.+.+..+.... .........
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~-~~~~~~~~~ 319 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEK-AEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccc-cccccCCCc
Confidence 77766655555 8888888777777777778899999999999999988889999988877654332211 011112234
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
+|+++|++|+||+. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.++||+++
T Consensus 320 ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 56677999999865 3799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000687 1162 AIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAE 1241 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ 1241 (1350)
++|||+|++|+|||||||.+++++.+|||++++++.+++.+|+.. |+|+||++||+|.+|||||+||+++|||++++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1242 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1242 ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
++|||||||+||.+||+.|++.|.++.+++|||+||||+..+.+||+|+|||+||++|.|+|++|+++ +|.|++|+..
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l~~~ 554 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANLLKQ 554 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 8999999998
Q ss_pred hhh
Q 000687 1322 QRF 1324 (1350)
Q Consensus 1322 q~~ 1324 (1350)
|..
T Consensus 555 q~~ 557 (559)
T COG4988 555 QEG 557 (559)
T ss_pred Hhc
Confidence 764
No 41
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.6e-80 Score=781.50 Aligned_cols=567 Identities=23% Similarity=0.334 Sum_probs=478.6
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
++++..+.++.++.+++.+++.++..++....++++..+++.......... .....+.++++++.++..++.+++.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 11 LKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556666666666777777777777788888888776543221111 1111122334445556677888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 904 (1350)
...+.+...++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|++
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRM 167 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999985 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++...+.....+...++..+...+...++.|.+.|+++||+|+.++.+.++|.+..+...+...+....
T Consensus 168 ~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (592)
T PRK10790 168 ALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRL 247 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888777777777667767777777788889999999999999999999999999998888777766655554
Q ss_pred Hhhh-HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000687 985 AGSG-YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 985 ~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~ 1063 (1350)
.+.. ..+..++..+...+..++++. +..|.++++.++.+..+......++..+......+.++..+++|+.++++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 326 (592)
T PRK10790 248 DGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPR 326 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4432 223333333322222233333 57899999999888888888889999999999999999999999999987654
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000687 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.... . .. +...++|+|+||+|+||+ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 327 ~~~~~--~--~~-~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 327 QQYGN--D--DR-PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred ccCCC--C--cc-CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 32111 1 11 123468999999999974 34799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||.||+|||||||.+++ +++|++++++++.++++++|.++|+||||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999997 689999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||||||||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHhhhhc
Q 000687 1304 SHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+||+++ ++.|++|++.|...
T Consensus 559 ~~L~~~--~~~y~~l~~~~~~~ 578 (592)
T PRK10790 559 QQLLAA--QGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHhC--CCHHHHHHHHHhhh
Confidence 999988 79999999987543
No 42
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.6e-80 Score=782.18 Aligned_cols=564 Identities=29% Similarity=0.476 Sum_probs=487.2
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++++.++.++.++..+++.++..+.....++++..+++........ .....+...++++.++..++.+++.++..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 92 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSYCISWV 92 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444455556666665544322111 1111222233445666778888888889999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.+....+|..+|+++++.|..+|++ ...|++++|+++|++.+.+.+...+..++..++.+++.++++++++|+++++
T Consensus 93 ~~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 170 (582)
T PRK11176 93 SGKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLI 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++++|+.++......+..+...++.++...+...++.|.++|+++||+|+.++.+.++|.+..+...+...+.......
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T PRK11176 171 LIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888777777777777777777888888899999999999999999999999999999999998888888887777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
...+..++..+..++++++|++++..|.+++|.++.++.++.....++..+......+.++..+.+|+.++++.+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 330 (582)
T PRK11176 251 SDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDE 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCC
Confidence 77778888888888889999999999999999998888888888889999999999999999999999999876544221
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
.. . . .++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 331 ~~--~-~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~ 405 (582)
T PRK11176 331 GK--R-V-IERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGH 405 (582)
T ss_pred CC--c-C-CCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCE
Confidence 11 1 1 11234679999999999754 357999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCC-CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1148 di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
|+++++.+++|++|+||||||++|+|||||||.++.++ ++|++++++++.+++++++.++|+||||.+||+|.+|||||
T Consensus 406 ~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGq 485 (582)
T PRK11176 406 DLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQ 485 (582)
T ss_pred EhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHH
Confidence 99999999999999999999999999999999998754 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||||+|||||+++|+|||||||||+||++||+.+.++|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|
T Consensus 486 rQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l 565 (582)
T PRK11176 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAEL 565 (582)
T ss_pred HHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHhhh
Q 000687 1307 LKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~~q~ 1323 (1350)
+++ ++.|++|++.|.
T Consensus 566 ~~~--~~~y~~l~~~~~ 580 (582)
T PRK11176 566 LAQ--NGVYAQLHKMQF 580 (582)
T ss_pred HhC--CChHHHHHHHHh
Confidence 988 789999998764
No 43
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.3e-81 Score=712.81 Aligned_cols=571 Identities=27% Similarity=0.362 Sum_probs=474.2
Q ss_pred hHHHHHHhhChhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDYV----LMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
..+.+..|.++...+ .++.++++.+.+.......|.+++.++|........+ .........+..+.+..+...++
T Consensus 12 ~~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~F 90 (591)
T KOG0057|consen 12 ILRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSVF 90 (591)
T ss_pred HHHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHHH
Confidence 344555555443221 2223333333335556666777888888653111111 11112222344556667778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000687 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAV- 242 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~- 242 (1350)
+.++...+.++.+++.++.-.++|.+++.+++++|.+. .+|++.+.+..-...|.+.+.-.+..++..++-+......
T Consensus 91 ~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l 169 (591)
T KOG0057|consen 91 NELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGIL 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 9999999999999999998887777777766654443322
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000687 243 GFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQR 322 (1350)
Q Consensus 243 ~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~ 322 (1350)
..-.....+++++..+..+..+......+..+..++...+.+.+.+.+.|.+.|..+||+||.|+++.++|.....++.+
T Consensus 170 ~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~ 249 (591)
T KOG0057|consen 170 YYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYER 249 (591)
T ss_pred HHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 23345666777777666666666677777777888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 323 LGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIF 402 (1350)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 402 (1350)
.+.+.....++.......+..+..+.+.+.|..-+.+|.+|.|.++...........|+..+...+..+.++..-++-.+
T Consensus 250 ~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~ 329 (591)
T KOG0057|consen 250 AGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLF 329 (591)
T ss_pred hhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 98887777666665555566666677777888778889999999998877777788899999999999988888887777
Q ss_pred HHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000687 403 RIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP 482 (1350)
Q Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 482 (1350)
...+....+. +...+....++.|+|+||+|+|+ +++++|+++||+|++||++||||+|||||||++++|+||++
T Consensus 330 ~l~~~~~~i~---~~~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d- 403 (591)
T KOG0057|consen 330 ILLEVDEDIQ---EAALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD- 403 (591)
T ss_pred hhhhhhhhhh---hccCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-
Confidence 6554332221 11123334567899999999997 34569999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccC
Q 000687 483 TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGE 562 (1350)
Q Consensus 483 ~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~ 562 (1350)
++|+|+|||+|+++++++++|+.|||||||..||++||.+||.||+|.++++++.++||.+++||-+++||+||+|.|||
T Consensus 404 ~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 404 YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000687 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i 642 (1350)
+|..|||||||||+||||+++||||+++|||||+||.+||+.+.+.+.+...+||+|+|+||++++++||+|++|++|++
T Consensus 484 rG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v 563 (591)
T KOG0057|consen 484 RGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTV 563 (591)
T ss_pred cccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCee
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEecChHHHHhccCCcHHHHHHHHHH
Q 000687 643 SEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 643 ~~~g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
.|.|+|+||++. ++.|+++|..|.
T Consensus 564 ~e~gth~ell~~--s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 564 KEYGTHSELLAP--SELYADLWTTQT 587 (591)
T ss_pred EEeccHHHHhhh--hhHHHHHhcccc
Confidence 999999999995 899999997654
No 44
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.9e-81 Score=850.29 Aligned_cols=648 Identities=16% Similarity=0.205 Sum_probs=471.8
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCC----CCCCCCCcchhh-c----ccchhhhh-hccc---CCCCCC
Q 000687 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSN----NNYANPSPQAQA-Q----ETTTTTKR-QMEN---NSSSSS 71 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~~~~-~~~~---~~~~~~ 71 (1350)
+|++++++.+ |.| +|++|++++.|++.+..+.. ....+....++. . +.+..... ..+. ......
T Consensus 797 TH~~~~l~~a--D~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1495)
T PLN03232 797 TNQLHFLPLM--DRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGS 874 (1495)
T ss_pred ECChhhHHhC--CEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccccccccccccc
Confidence 6999999998 999 99999999999876543221 111111100000 0 00000000 0000 000000
Q ss_pred CCC------CCCCCCCCCCccchHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHH
Q 000687 72 SAA------NSEPKKPSDVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQE 145 (1350)
Q Consensus 72 ~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 145 (1350)
... ....+|++..+.+.+..+++|++...+..+++.+++..+...+...++.+|...|......... .
T Consensus 875 ~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~------~ 948 (1495)
T PLN03232 875 TKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSY------S 948 (1495)
T ss_pred ccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC------C
Confidence 000 0012233345667888888888653322222222222222222223333333334321100000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHH
Q 000687 146 VLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEK 225 (1350)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~ 225 (1350)
...++.++++++++..++.+++.+++.+.+.+...++|.+++++++++|++|||++ ++|+++||+++|++.+++.++..
T Consensus 949 ~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~ 1027 (1495)
T PLN03232 949 PGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANL 1027 (1495)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHH
Confidence 12345556667777778888888899999999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhc
Q 000687 226 LGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLI-AVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFV 304 (1350)
Q Consensus 226 ~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~ 304 (1350)
+..++..++.++++++++++++|...+++ ++++++ +++..++.+..++..+......++..+++.|+++|+++||+|+
T Consensus 1028 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~ 1106 (1495)
T PLN03232 1028 MNMFMNQLWQLLSTFALIGTVSTISLWAI-MPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYK 1106 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCC
Confidence 99999998888888888877776433332 333332 2233344455666777778888999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccC----HHHHHH-HHHHHHHHH
Q 000687 305 GESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVR-HHFTN----GGLAIA-TMFAVMIGG 378 (1350)
Q Consensus 305 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~~----~g~~~~-~~~~~~~~~ 378 (1350)
+++++.+++.+..+...+..+.......+ ..+. +..+..+++++.|...+. .+.+. .+..++ ++.+.....
T Consensus 1107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~w-l~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 1183 (1495)
T PLN03232 1107 AYDRMAKINGKSMDNNIRFTLANTSSNRW-LTIR--LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNIT 1183 (1495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 99988877777666655544332222111 1111 111222222333333343 23221 112222 233344455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccC--CCCcceEEEEEEEEECCCCCCCccccceEEEeeCC
Q 000687 379 LALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLEL--DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAG 456 (1350)
Q Consensus 379 ~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g 456 (1350)
.++.++...+..++.++.|++||.++++.++|.+...+...++ .+..|.|+|+||+|+|+++ .+++|+|+||+|++|
T Consensus 1184 ~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~G 1262 (1495)
T PLN03232 1184 TLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPS 1262 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCC
Confidence 5788888889999999999999999998776643211111111 1345789999999999642 347999999999999
Q ss_pred CEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHH
Q 000687 457 KTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEI 536 (1350)
Q Consensus 457 ~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~ 536 (1350)
|++|||||||||||||+++|+|+|+|++|+|.|||+|+++++.+++|++|+||||||.||+|||||||.+++ +++++++
T Consensus 1263 ekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei 1341 (1495)
T PLN03232 1263 EKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADL 1341 (1495)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999986 5889999
Q ss_pred HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCC
Q 000687 537 EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGR 616 (1350)
Q Consensus 537 ~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~ 616 (1350)
++|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++
T Consensus 1342 ~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~ 1421 (1495)
T PLN03232 1342 WEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSC 1421 (1495)
T ss_pred HHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988999
Q ss_pred eEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000687 617 TTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 617 t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~ 669 (1350)
|+|+||||++++.+||+|+||++|+|+|.|+|+||+++. ++.|++|++.+..
T Consensus 1422 TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~-~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1422 TMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRD-TSAFFRMVHSTGP 1473 (1495)
T ss_pred EEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCC-CCHHHHHHHHhCh
Confidence 999999999999999999999999999999999999872 4699999987654
No 45
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.3e-80 Score=778.25 Aligned_cols=565 Identities=34% Similarity=0.512 Sum_probs=505.5
Q ss_pred HHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 90 GELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEIS 169 (1350)
Q Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1350)
+.++++.++. ++.++++++++++.+++.+..|.+++.++|...... . . ..+..++..++++.++.+++.+++.+
T Consensus 3 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~-~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (571)
T TIGR02203 3 RRLWSYVRPY-KAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR-D-R---SVLWWVPLVVIGLAVLRGICSFVSTY 76 (571)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-c-h---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666554 345667777778888888888888888888543311 1 1 11222333444555666778888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000687 170 CWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQ 249 (1350)
Q Consensus 170 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 249 (1350)
+..+.+.++..++|..+|+++++.|.++|++. ++|++++|+++|++.+++++...+..++.++..+++.++++++++|+
T Consensus 77 ~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 77 LLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999987 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 250 LALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGF 329 (1350)
Q Consensus 250 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~ 329 (1350)
+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+++.|+.+.++|++..++..+...+...
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000687 330 AKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKP 409 (1350)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 409 (1350)
..+....+..++.++..++++++|++++.+|.++.|.++++..++.....|+..+...+..+.+++.+.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888888899999999999999999999999988888889999999999999999999999999998765
Q ss_pred CCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 000687 410 SIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLL 489 (1350)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i 489 (1350)
+.+.. .....+..+.|+++||+|+|++. +.++|+|+||++++||+++|+|+||||||||+++|+|+|+|++|+|++
T Consensus 316 ~~~~~---~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 316 EKDTG---TRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CCCCC---CCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 53211 11112234679999999999754 357999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCC-CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 490 DGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRP-DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 490 ~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
||+++++++.+++|++|+||||+|++|++|++|||.++++ +.++++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LS 471 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLS 471 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCC
Confidence 9999999999999999999999999999999999999986 789999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 472 gGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 472 GGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000687 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~~~~l~~~~ 667 (1350)
++++++ ++.|+++++.+
T Consensus 552 ~~l~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 552 NELLAR--NGLYAQLHNMQ 568 (571)
T ss_pred HHHHHc--CCHHHHHHHHh
Confidence 999987 68898887654
No 46
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.8e-80 Score=790.26 Aligned_cols=564 Identities=26% Similarity=0.399 Sum_probs=493.4
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++++.++.+..+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++....
T Consensus 130 ~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 130 FIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444444455555555555566666777777765542211 11222334445556666788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.++..++|.++|+++++.|+.||++ +++|++++|+ +|++.+++++...+..++.+++.+++.++++++++|+++++
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986 7899999999 69999999998888888878887777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++++|++++..++..+..++..++..+..++..+++.|+++|+++||++|.|+.+.++|.+..++..+...+.......
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887777777767767777777888899999999999999999999999999999999998888888888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
...+.+.+..+..++.+|+|++++..|.+++|.++++..+......++..+......+.++..+++|+.++++.+++.+.
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 443 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS 443 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 88888888888899999999999999999999999988888888999999999999999999999999999987665332
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
.. . ...+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 444 ~~--~-~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~ 519 (694)
T TIGR01846 444 AG--L-AALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGV 519 (694)
T ss_pred CC--C-CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 11 1 1112345789999999999754 346999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1148 di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|+++++.+++|++|+||||||++|++||+|||.+++++++++++++|++.+++++++.++|+||||.++++|.+||||||
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~ 599 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQR 599 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHh
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
||+||||||+++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|++|+
T Consensus 600 qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~ 679 (694)
T TIGR01846 600 QRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELL 679 (694)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHhhh
Q 000687 1308 KNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~~q~ 1323 (1350)
++ +|.|++|++.|.
T Consensus 680 ~~--~~~y~~l~~~~~ 693 (694)
T TIGR01846 680 AL--QGLYARLWQQQS 693 (694)
T ss_pred Hc--CChHHHHHHhhc
Confidence 87 799999998653
No 47
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.8e-80 Score=837.48 Aligned_cols=513 Identities=20% Similarity=0.250 Sum_probs=431.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 153 FLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHY 232 (1350)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~ 232 (1350)
+++++++..++.+++.++....+.+...++|.++|++++++|+.|||++ ++|+++||+++|++.+++.+...+..++..
T Consensus 1004 y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~ 1082 (1560)
T PTZ00243 1004 YLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQC 1082 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 3333444444555555555666777788999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHH
Q 000687 233 LATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQA 312 (1350)
Q Consensus 233 ~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~ 312 (1350)
++.+++.++++++.+|.+.++++.++.+++.+..++.+..++..+......+++.+++.|+++|+++||+|++|+.+.++
T Consensus 1083 ~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~ 1162 (1560)
T PTZ00243 1083 LFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQE 1162 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHH
Confidence 99999999999999886555444444444555666777778888888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 313 YSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLV--RHHFTNGGLAIATMFAVMIGGLALAQAAPSISA 390 (1350)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~ 390 (1350)
|.+..+...+..++......+......++..+..+++.+++...+ ..+.++.|.+..++++......++.++...+..
T Consensus 1163 ~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~ 1242 (1560)
T PTZ00243 1163 ALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVAT 1242 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888877665555544444444444444334444443332 334567887666666666677789999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCC------------------------CCCc-----cCCCCcceEEEEEEEEECCCCC
Q 000687 391 FAKAKVAAAKIFRIIDHKPSIDRNS------------------------ESGL-----ELDSVSGLIELKHVDFSYPSRP 441 (1350)
Q Consensus 391 ~~~~~~s~~ri~~~l~~~~~~~~~~------------------------~~~~-----~~~~~~g~i~~~~v~f~y~~~~ 441 (1350)
+++++.+++||.++++..++.+... +... +..+..|.|+|+||+|+|++.
T Consensus 1243 le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~- 1321 (1560)
T PTZ00243 1243 VEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG- 1321 (1560)
T ss_pred HHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-
Confidence 9999999999999997533211000 0000 011235789999999999753
Q ss_pred CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHH
Q 000687 442 EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIK 521 (1350)
Q Consensus 442 ~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 521 (1350)
.+++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|+|||+|+++++.+++|++||||||||.||+||||
T Consensus 1322 ~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIr 1401 (1560)
T PTZ00243 1322 LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVR 1401 (1560)
T ss_pred CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHH
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC-CCEeEEecccCCcCHH
Q 000687 522 ENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN-PAILLLDEATSALDSE 600 (1350)
Q Consensus 522 ~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~-~~illlDE~ts~lD~~ 600 (1350)
|||.++. +++++++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||++
T Consensus 1402 eNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~ 1480 (1560)
T PTZ00243 1402 QNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPA 1480 (1560)
T ss_pred HHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHH
Confidence 9998764 6789999999999999999999999999999999999999999999999999996 8999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000687 601 SEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 601 ~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~ 669 (1350)
|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ .++.|++|++.+..
T Consensus 1481 te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1481 LDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEALGR 1548 (1560)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhCh
Confidence 999999999998899999999999999999999999999999999999999975 27899999977643
No 48
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.5e-79 Score=767.83 Aligned_cols=564 Identities=27% Similarity=0.358 Sum_probs=488.7
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++++++|++++++ .++++++++++..++.+..|++++.++|.+... . . . . .+.+.++++.++.++..++..
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~--~-~---~-~~~~~~~~~~~~~~~~~~~~~ 77 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSK-S--D-V---L-PTLALWAGFGVFNTIAYVLVA 77 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--c-H---H-HHHHHHHHHHHHHHHHHHHHH
Confidence 5677788776644 456677777777888888888999999976431 1 1 1 0 111112222333344445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
++......++..++|.++|+|++++|++||+++ ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 156 (585)
T TIGR01192 78 READRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDW 156 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666666777799999999999999988 9999999999999999999988888888888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 157 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (585)
T TIGR01192 157 RLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVL 236 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888889999999999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000687 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...++...+..++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..+..++.+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~ 316 (585)
T TIGR01192 237 DWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSV 316 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777777777777888899999999999999999999888888888899999999999999999999999999875
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000687 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+.. ......+...+.|+++||+|+|++. .++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 317 ~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 393 (585)
T TIGR01192 317 FQREEP-ADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQIL 393 (585)
T ss_pred ccccCC-ccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEE
Confidence 543211 1111112234679999999999742 3689999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
+||.++.+++.+++|++++||||+|++|++|++|||.++.+++++++++++++.+++++++.++|+|++|.+|++|.+||
T Consensus 394 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LS 473 (585)
T TIGR01192 394 IDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLS 473 (585)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++++..||+|++|++|++++.|+|
T Consensus 474 gGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 474 GGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000687 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~~~~l~~~~ 667 (1350)
++++++ ++.|+++++.+
T Consensus 554 ~~l~~~--~~~y~~l~~~~ 570 (585)
T TIGR01192 554 QELIQK--DGRFYKLLRRS 570 (585)
T ss_pred HHHHHC--CChHHHHHHhC
Confidence 999987 79999998755
No 49
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.9e-79 Score=770.13 Aligned_cols=566 Identities=28% Similarity=0.386 Sum_probs=485.4
Q ss_pred hHHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++++++++++++ ..+.+.++++++..++....|++++.++|.+... . .. ..+.+.+++++++..+..++.
T Consensus 6 ~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~ 76 (588)
T PRK13657 6 LYARVLQYLGAEK-RLGILLAVANVLLAAATFAEPILFGRIIDAISGK-G---DI----FPLLAAWAGFGLFNIIAGVLV 76 (588)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c---cH----HHHHHHHHHHHHHHHHHHHHH
Confidence 3556777766543 3445566666666667777777888889876431 1 11 111122222233333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 247 (1350)
.++..+...++..++|.++|+|++++|..+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++
T Consensus 77 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (588)
T PRK13657 77 ARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMN 155 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566666777799999999999999988 999999999999999998888888888888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000687 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|++++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||.|+.++.+.++|.+..++..+...+.
T Consensus 156 ~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (588)
T PRK13657 156 WRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPV 235 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888899999988888999999999999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
....+....+..++..+..++++++|++++.+|.+++|.+++++.++.....|+.++...+..+..+..+.+|+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~ 315 (588)
T PRK13657 236 LSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDA 315 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77777777777777777888889999999999999999999988888888889999999999999999999999999987
Q ss_pred CCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000687 408 KPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
+++.+.. ......+...+.|+++||+|+|+++ +++|+|+||++++||+++|+|+||||||||+++|+|+|+|++|+|
T Consensus 316 ~~~~~~~-~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I 392 (588)
T PRK13657 316 VPDVRDP-PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRI 392 (588)
T ss_pred CcccCCC-CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE
Confidence 5542211 1111112234579999999999742 469999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
.+||+|+++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 393 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~L 472 (588)
T PRK13657 393 LIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQL 472 (588)
T ss_pred EECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|+
T Consensus 473 SgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~ 552 (588)
T PRK13657 473 SGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGS 552 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998878999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHH
Q 000687 648 HDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
|++|+++ ++.|++++..+.
T Consensus 553 ~~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 553 FDELVAR--GGRFAALLRAQG 571 (588)
T ss_pred HHHHHHC--CChHHHHHHHhh
Confidence 9999987 789999987654
No 50
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8.1e-80 Score=769.61 Aligned_cols=526 Identities=25% Similarity=0.282 Sum_probs=451.6
Q ss_pred HHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 90 GELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEIS 169 (1350)
Q Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1350)
+++++|.+++++ .+++++++.++..++....|++++.++|..... + . .. ........++++.++..++.++..+
T Consensus 2 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~--~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (529)
T TIGR02868 2 LRILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEM--P-P-VL-YLSVAAVAVRAFGIGRAVFRYLERL 75 (529)
T ss_pred hhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--c-h-hH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667766544 345556666666666666777888888865321 1 1 10 1111111122334456677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000687 170 CWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQ 249 (1350)
Q Consensus 170 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 249 (1350)
+....+.++..++|.++|+|++++|..||++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 76 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (529)
T TIGR02868 76 VGHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVP 154 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88899999999999999999999999999988 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 250 LALVTLAVVPLIAVIGAIHA-TSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 250 l~lv~l~~~pl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
+++++++.+|++.++..++. +..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++..+...+..
T Consensus 155 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (529)
T TIGR02868 155 AALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAA 234 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888766654444 44466667778888999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000687 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...+...++..++..+..++++++|++++.+|.++.|.+++++++......|+..+...+..+++++++.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (529)
T TIGR02868 235 RATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAK 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888888888888888888899999999999999999999888888888889999999999999999999999999876
Q ss_pred CCCCCCCCC-CccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000687 409 PSIDRNSES-GLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 409 ~~~~~~~~~-~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
++.+..... .....+..+.|+|+||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I 392 (529)
T TIGR02868 315 GPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEV 392 (529)
T ss_pred CCcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 643211110 01111234579999999999753 369999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
.+||+|++++ .+++|++|+||||+|+||++||+|||++|+|++++++++++++.+++++++.+||+||||.+||+|.+|
T Consensus 393 ~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 471 (529)
T TIGR02868 393 TLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARL 471 (529)
T ss_pred EECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcC
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRL 625 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 625 (1350)
|||||||||||||++++|+|||||||||+||+++|+.|++.|.++.+++|+|+||||+
T Consensus 472 SGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 472 SGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999999988899999999996
No 51
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.1e-79 Score=764.88 Aligned_cols=540 Identities=26% Similarity=0.394 Sum_probs=474.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh
Q 000687 118 FPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQY 197 (1350)
Q Consensus 118 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~ 197 (1350)
....|++++.++|.+.....+. .....++.+++++.++..++.++..++....+.++..++|.++|++++++|++|
T Consensus 11 ~~~~p~~~~~iid~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~ 86 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHMTT----GQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEF 86 (569)
T ss_pred HHHHHHHHHHHHHHhccCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3344556788888654221111 112223333444444566677888888888999999999999999999999999
Q ss_pred HhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 198 FDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG-FSAVWQLALVTLAVVPLIAVIGAIHATSLAKLA 276 (1350)
Q Consensus 198 fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~ 276 (1350)
|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|++++++++++|+++++..++.++.++..
T Consensus 87 ~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~ 165 (569)
T PRK10789 87 YLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERF 165 (569)
T ss_pred HcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 99999999999999999888888888888766666666555 589999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 277 GKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYL 356 (1350)
Q Consensus 277 ~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 356 (1350)
++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+.....+...++...+..++.++++++|+++
T Consensus 166 ~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 245 (569)
T PRK10789 166 KLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM 245 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888888887777777777777777778888999999
Q ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEE
Q 000687 357 VRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFS 436 (1350)
Q Consensus 357 v~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~ 436 (1350)
+.+|.++.|.+++++.+......|+..+...+..+.+++++.+|+.++++.+++.+. .....+...+.|+++|++|+
T Consensus 246 v~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 246 VVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD---GSEPVPEGRGELDVNIRQFT 322 (569)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC---CCCCCCCCCCcEEEEEEEEE
Confidence 999999999999998888888889999999999999999999999999987654321 11112223467999999999
Q ss_pred CCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccc
Q 000687 437 YPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALF 516 (1350)
Q Consensus 437 y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf 516 (1350)
|+.. +.++|+|+||++++|++++|+||||||||||+++|+|+|+|++|+|++||+++.+++..++|++|+||+|+|++|
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 357999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCC
Q 000687 517 ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSA 596 (1350)
Q Consensus 517 ~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~ 596 (1350)
++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+|||||||||+||||++++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000687 597 LDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 597 lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
||+++++.+.+.|+++.+++|+|+||||++++..||+|++|++|++++.|+|++++++ ++.|+++++.|.
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~ 551 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQ 551 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhh
Confidence 9999999999999998889999999999999999999999999999999999999987 789999998764
No 52
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.4e-80 Score=705.14 Aligned_cols=543 Identities=27% Similarity=0.415 Sum_probs=447.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 000687 770 GSLNAFFAYVLSAIMSVYYNPDH-AYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEI 848 (1350)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 848 (1350)
..+....+.++...++.....+. ..........+..|..+.+...++..++...|.++.+++.+..-.+.|.+++.+++
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34555556666655554421111 11122223345667778888999999999999999999999999999999999999
Q ss_pred ccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 849 AWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTA-GFVLQWRLALVLIAVFPVVVAATVLQKMFMK 927 (1350)
Q Consensus 849 ~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~ 927 (1350)
+||-. ..+|.+.+.+.+-...+...+...+..++..++-+...... -.-+++..+++.+..+.....+.+....+..
T Consensus 123 ~~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred HhhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99975 56899999888888888877777666666655444433322 2334555555555555555555444555555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000687 928 GFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYS 1007 (1350)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 1007 (1350)
.+++++..+...+...+.+++.|.++||+||-|++..++|...+....+...+.....++..-....+.....+.+.+++
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777888888999999999999999999999999999999999998888777777766666555556656677777777
Q ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEE
Q 000687 1008 SWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKH 1087 (1350)
Q Consensus 1008 ~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~n 1087 (1350)
..-+..|.++++.++.....+.....++..+.....++.++..-+...+...+...... ....+....+|.|+|+|
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~----~~~~~i~~~~~~I~F~d 356 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQ----EAALPIELFGGSIEFDD 356 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhh----hccCCcccCCCcEEEEe
Confidence 77778889999998877777777777777777777777777776666665433222111 11112233567899999
Q ss_pred EEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccC
Q 000687 1088 VDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQE 1167 (1350)
Q Consensus 1088 Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQd 1167 (1350)
|+|.|+ |+++||+++||+|++||||||||+|||||||++++|+||+| ++|+|+|||+|+++++++.+|+.|||||||
T Consensus 357 V~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd 433 (591)
T KOG0057|consen 357 VHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQD 433 (591)
T ss_pred eEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCc
Confidence 999997 34579999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000687 1168 PCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDE 1247 (1350)
Q Consensus 1168 p~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDE 1247 (1350)
.+||++||.+||.||++++++||+.++||.+++||.|.++|+||+|.|||+|..||||||||++||||+|++|||+++||
T Consensus 434 ~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 434 SVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred ccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhh
Q 000687 1248 ATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1248 aTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~ 1323 (1350)
|||+||.+||+.|.+.+.....|||+|+|+||++++++||+|+|||||+|+|+|+|+||+++ .+.|+++|..|.
T Consensus 514 aTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~--s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 514 ATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP--SELYADLWTTQT 587 (591)
T ss_pred cccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh--hhHHHHHhcccc
Confidence 99999999999999999998899999999999999999999999999999999999999985 899999998765
No 53
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-78 Score=765.79 Aligned_cols=570 Identities=35% Similarity=0.524 Sum_probs=494.7
Q ss_pred HHHHHHhhChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++.+++|++++++ .+.+.+++.++.+++....|++++.++|...... +.. ....+..+++++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD-SSG----LLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-cHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777665533 4455666667777777778888899998743211 111 111222333334444566677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 248 (1350)
++..+++.++..++|..+|++++++|..+|+.. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888899999999999999999999999999987 8999999999999999999988888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
++++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999999999999999999999999999999998888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000687 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
........+..++.++..++++++|++++.+|.++.|.++++..+......|+..++..+..+.+++.+.+|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66666666666666677778889999999999999999999888888888899999999999999999999999999876
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000687 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+..........+..+.|+++||+|+|++++++++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 54221111111111224579999999999854335799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
+||.|+++++..++|++|+||||+|++|++||+|||.+|+|+.++++++++++.+++++++.++|+|++|.+|++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000687 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~~~~l~~~~ 667 (1350)
++++++ ++.|+++++.|
T Consensus 559 ~~l~~~--~~~~~~l~~~~ 575 (576)
T TIGR02204 559 AELIAK--GGLYARLARLQ 575 (576)
T ss_pred HHHHHc--CChHHHHHhhc
Confidence 999987 78999988654
No 54
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.9e-78 Score=765.77 Aligned_cols=563 Identities=31% Similarity=0.494 Sum_probs=504.7
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++++.++.++.++++++++++.+++.+..++++..+++........ .....+..+++++.++..++.+++.++....
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDR---SVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666677777777888888888888887777655432211 1222334456666777788889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.++...+|..+|+++++.|.++|++ .+.|++++|+++|++.+++.+...+..++.+++.+++.++++++++|+++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
++++.|+.++...+..+..+...++..+...+..+.+.|.++|+++||+++.++.+.++|.+..+...+...+.....+.
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888899999999999999999999999999999999999998888888888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
...+...+..+..++.+++|++++..|.+++|.++++..++.....++..+......+.++..+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 88888888888899999999999999999999999999999999999999999999999999999999999986654321
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
.. .. .....+.|+|+||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|.|+|+|++|+|++||+
T Consensus 320 ~~---~~-~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~ 394 (571)
T TIGR02203 320 GT---RA-IERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGH 394 (571)
T ss_pred CC---CC-CCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCE
Confidence 11 11 11235689999999999764 357999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCC-CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE-SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1148 di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
|+++++.+++|++|+||||+|++|+|||||||.++++ +.++++++++++.+++++++.++|+||||.+|++|.+|||||
T Consensus 395 ~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq 474 (571)
T TIGR02203 395 DLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQ 474 (571)
T ss_pred eHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHH
Confidence 9999999999999999999999999999999999986 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|||||||||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|
T Consensus 475 rQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l 554 (571)
T TIGR02203 475 RQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNEL 554 (571)
T ss_pred HHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHhh
Q 000687 1307 LKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~~q 1322 (1350)
+++ ++.|++++..+
T Consensus 555 ~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 555 LAR--NGLYAQLHNMQ 568 (571)
T ss_pred HHc--CCHHHHHHHHh
Confidence 987 68999998865
No 55
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-78 Score=692.90 Aligned_cols=504 Identities=23% Similarity=0.354 Sum_probs=428.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHH
Q 000687 808 GLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNT 887 (1350)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~ 887 (1350)
++++...+..++...+.+.+..++...+|.++|+++...+..-..+ ..+|+++||+..|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 4667777888888888999999999999999999999888776664 67999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHH
Q 000687 888 ALMLVACTAGFVLQWRLALVLIAVF-PVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGL 966 (1350)
Q Consensus 888 ~~~i~~~~~~~~~~~~l~lv~l~~~-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 966 (1350)
...++..+..-+++|.+++.+...+ .++++..++..++-++..+..+.......+++.|.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 8877777777788888877655443 445556677777888888888888899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000687 967 FSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYA-LGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETL-TLAPD 1044 (1350)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1044 (1350)
+....+...+...+...+.++...+.+++..+..+ .++|.+. .+..|..+......+.++.+....+..-+. ..+.+
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99888888777777777777766666666665555 4444443 344455443222222222222222222223 34456
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCH
Q 000687 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGK 1124 (1350)
Q Consensus 1045 ~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGK 1124 (1350)
..+...+++|+.++.+.+++..... .. .+.... .++++||+|+||+. ..+||+|+||++++||||||+|||||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~~-~~--~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGK 377 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFPD-EQ--TATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGK 377 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCCc-cc--cCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCH
Confidence 6777889999999998887765431 11 111112 79999999999975 4579999999999999999999999999
Q ss_pred HHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHH
Q 000687 1125 SSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1125 STL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I 1204 (1350)
||++++|.|-|+|++|+|..+|.+++.++.+++|+.|++++|.++||++|+|+||.+++|++||||+|++++++++++++
T Consensus 378 STllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~ 457 (573)
T COG4987 378 STLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLL 457 (573)
T ss_pred HHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh
Q 000687 1205 SSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1205 ~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~ 1284 (1350)
++.|+||+|.+||+|.+||||||||+||||+||+|.|++||||||.+||++||++|.+.|.+..+|||+|+||||+..++
T Consensus 458 ~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 458 ESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred HhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1285 NAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1285 ~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
.||||+|||+|+++|+|+|++|+++ +|.|++|++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~--~g~~~~l~q~ 572 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLAN--NGRYKRLYQL 572 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhcc--ccHHHHHhcc
Confidence 9999999999999999999999997 8999999863
No 56
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.1e-77 Score=758.41 Aligned_cols=566 Identities=29% Similarity=0.398 Sum_probs=484.1
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 744 SFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSF 823 (1350)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (1350)
.+|+++++.++.+..+.+.++++++..++....++++..+++...... ....+.++++++.++..+..++..++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG------DIFPLLAAWAGFGLFNIIAGVLVARH 79 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666777777777777777777777888887777554321 11112223333334444444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 824 WDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWR 903 (1350)
Q Consensus 824 ~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 903 (1350)
..+...++..+++.++|+++++.|..+|++ .+.|++++|+++|++.+...+...+..++..++..++.++++++++|+
T Consensus 80 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 80 ADRLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666666677779999999999999985 789999999999999999888888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 904 LALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQ 983 (1350)
Q Consensus 904 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 983 (1350)
+++++++++|+.++...+..+..+...++..+......+.+.|.++|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888877777766666766777777788889999999999999999999999999999999888888777777
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000687 984 IAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~ 1063 (1350)
.......+.+++..+...+++++|++++.+|.+++|.++++..++.....++..+......+..+..+.+++.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 77777777778888888899999999999999999999988888888888999999999999999999999999887654
Q ss_pred CCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000687 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.+... .. .......+.|+|+||+|+||++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 318 ~~~~~~-~~-~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 318 DVRDPP-GA-IDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred ccCCCC-CC-CCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 422111 11 1111234679999999999743 4699999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||.+|+|||||||.+++++++|++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||||||||||||+++|+|||||||||+||+++|+.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHhhh
Q 000687 1304 SHLLKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~q~ 1323 (1350)
++|+++ ++.|++|+..+.
T Consensus 554 ~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 554 DELVAR--GGRFAALLRAQG 571 (588)
T ss_pred HHHHHC--CChHHHHHHHhh
Confidence 999987 799999998664
No 57
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.1e-78 Score=755.40 Aligned_cols=524 Identities=22% Similarity=0.271 Sum_probs=445.8
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 749 AKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVG 828 (1350)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (1350)
+++.++.++.+++.++++++..++....+++++.+++....... ......+...++++.++..++.++..++....+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (529)
T TIGR02868 5 LPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP---VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAA 81 (529)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555666666666666666777777777765432211 000011111122344556777888888999999
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 829 ENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVL 908 (1350)
Q Consensus 829 ~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~ 908 (1350)
.++..++|.++|+++++.|..||++ +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++
T Consensus 82 ~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 159 (529)
T TIGR02868 82 LRSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVL 159 (529)
T ss_pred HHHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999986 78999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000687 909 IAVFPVVVAAT-VLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 909 l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
++.+|++.++. .+..+..+...++.++..++..+++.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+.
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02868 160 AAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGL 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877765554 44444445555666777788899999999999999999999999999999999888888888888887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~ 1067 (1350)
...+..++..+..++.+|+|.+++..|.++.+.+.++..+......++..+......+.++..+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (529)
T TIGR02868 240 GAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPE 319 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 77888888888888899999999999999999988888887777888888888888999999999999999987654322
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
.+........+..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 320 ~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~ 397 (529)
T TIGR02868 320 GVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGV 397 (529)
T ss_pred CCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCE
Confidence 1111000011234679999999999753 36999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1148 di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|++++ .+++|++|+||||||+||+|||||||.+|+|+++||++++|++.++++++|.++|+||||.+||+|.+||||||
T Consensus 398 ~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQr 476 (529)
T TIGR02868 398 SVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGER 476 (529)
T ss_pred EhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHH
Confidence 99999 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCc
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRL 1280 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRl 1280 (1350)
||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 477 QRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 477 QRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999988999999999996
No 58
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.8e-77 Score=749.41 Aligned_cols=567 Identities=26% Similarity=0.385 Sum_probs=486.6
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++++.+++++.++++++++++..++..+.+++++.+++.....+. ...+..+++++.++..+..++..++.
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666667777777778888888888888888888888876543221 01112222223334444555555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l 904 (1350)
..+..++..++|.++|++++++|++||++ +++|++++|+++|++.+.+.+...+..++..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677777889999999999999986 6799999999999999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++......+..+...++..+...+..+++.|+++|+++||+|+.++.+.+++.+..++..+...+....
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988877777766667666677777788889999999999999999999999999999888877777766666
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000687 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~ 1064 (1350)
.+....+...+..+..++++++|.+++.+|.+++|.++++..+......++..+......+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 66666667777777888889999999999999999998888888888888989999999999999999999999876544
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEE
Q 000687 1065 IEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMI 1144 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1144 (1350)
.+.... . ...+...+.|+|+||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 319 ~~~~~~-~-~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 319 REEPAD-A-PELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred ccCCcc-C-CCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 321111 0 1111234679999999999743 36899999999999999999999999999999999999999999999
Q ss_pred CCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCCh
Q 000687 1145 DGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1145 dG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
||+|+++++.+++|++++||||||.+|++|++|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChh
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
|||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhhcCCCchhHHHHHhhhhc
Q 000687 1305 HLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1305 eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+|+++ +|.|+++++.|...
T Consensus 555 ~l~~~--~~~y~~l~~~~~~~ 573 (585)
T TIGR01192 555 ELIQK--DGRFYKLLRRSGLL 573 (585)
T ss_pred HHHHC--CChHHHHHHhCccc
Confidence 99987 79999999987543
No 59
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.2e-77 Score=753.00 Aligned_cols=566 Identities=32% Similarity=0.534 Sum_probs=490.5
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 749 AKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVG 828 (1350)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (1350)
+++.++.+..+.+.+++.++.+++....++++..+++....... ......+..+++++.++..++.+++.++...++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (576)
T TIGR02204 10 WPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTWLG 86 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445555666667777777777788888887776432211 111222333444455556677788888999999
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 829 ENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVL 908 (1350)
Q Consensus 829 ~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~ 908 (1350)
.++...+|..+++++++.|..+|+. ..+|++++|+++|++.+++.+...+..++..++.+++.+++++.++|++++++
T Consensus 87 ~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 87 ERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999986 67899999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000687 909 IAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSG 988 (1350)
Q Consensus 909 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1350)
++.+|+.++...+..+..+...++..+...+..+++.|.++|+++||+++.++.+.++|.+..+...+...+........
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777777777777778888888888999999999999999999999999999999988877777766666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC
Q 000687 989 YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPD 1068 (1350)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~ 1068 (1350)
..+...+.++..++.+++|++++..|.++++.++++..+......++..+......+.++..+.+|+.++++.+++.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 66666666677788889999999999999999988888888888999999999999999999999999998876543211
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc
Q 000687 1069 DPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD 1148 (1350)
Q Consensus 1069 ~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d 1148 (1350)
.... ..+.+..+.|+|+||+|+||++.++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 325 ~~~~-~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 325 AHPK-TLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred CCCc-cCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 1111 111123467999999999986433579999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1149 IRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1149 i~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+++++.+++|++|+||||||++|+|||||||.+++|+.+|++++++++.+++++++.++|+|+||++||+|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred cCCCchhHHHHHhh
Q 000687 1309 NNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1309 ~~~~g~y~~l~~~q 1322 (1350)
+ ++.|++|++.|
T Consensus 564 ~--~~~~~~l~~~~ 575 (576)
T TIGR02204 564 K--GGLYARLARLQ 575 (576)
T ss_pred c--CChHHHHHhhc
Confidence 7 79999999865
No 60
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.3e-77 Score=749.22 Aligned_cols=543 Identities=26% Similarity=0.393 Sum_probs=471.5
Q ss_pred HHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccc
Q 000687 772 LNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWF 851 (1350)
Q Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fF 851 (1350)
+..+.+++++.+++........ ......|..+++++.++..++.+++.++....+.+...++|.++|+++++.|++||
T Consensus 10 ~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~ 87 (569)
T PRK10789 10 LQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFY 87 (569)
T ss_pred HHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3344556666666654322111 11223344445555566677788888888899999999999999999999999999
Q ss_pred cccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000687 852 DQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG-FVLQWRLALVLIAVFPVVVAATVLQKMFMKGFS 930 (1350)
Q Consensus 852 d~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~ 930 (1350)
++ +++|++++|+++|++.++..+...+..++..++..+++++++ ++++|.+++++++++|+.++......+..++..
T Consensus 88 ~~--~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~ 165 (569)
T PRK10789 88 LR--HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERF 165 (569)
T ss_pred cC--CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 85 789999999999999999888888887777766666665555 579999999999999988887777777777667
Q ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000687 931 GDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWL 1010 (1350)
Q Consensus 931 ~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 1010 (1350)
++.++..++..+.+.|++.|+++||+|+.|+.+.++|.+..++..+...+.....+....+.+....+..++.+++|.++
T Consensus 166 ~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 245 (569)
T PRK10789 166 KLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM 245 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888889999999999999999999999999999999888887777777777766777777777788888999999
Q ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEE
Q 000687 1011 VKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDF 1090 (1350)
Q Consensus 1011 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf 1090 (1350)
+..|.+++|.++++..+......++..+......+.++..+.+|+.++++.+++.+... ... +...+.|+|+||+|
T Consensus 246 v~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~-~~~~~~I~~~~v~~ 321 (569)
T PRK10789 246 VVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPV-PEGRGELDVNIRQF 321 (569)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCC-CCCCCcEEEEEEEE
Confidence 99999999999988888888888999999999999999999999999998765432211 111 12356899999999
Q ss_pred ECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCC
Q 000687 1091 SYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCL 1170 (1350)
Q Consensus 1091 ~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~L 1170 (1350)
+|+.. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++++||||+|++
T Consensus 322 ~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 99753 34799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCC
Q 000687 1171 FASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATS 1250 (1350)
Q Consensus 1171 F~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTS 1250 (1350)
|++||||||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999988899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHhhhhc
Q 000687 1251 ALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1251 aLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+||+++++.+++.|++..+|+|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++.|+..
T Consensus 481 ~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~~~ 553 (569)
T PRK10789 481 AVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQLE 553 (569)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhhhc
Confidence 99999999999999998889999999999999999999999999999999999999987 79999999987643
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.6e-77 Score=742.33 Aligned_cols=525 Identities=26% Similarity=0.322 Sum_probs=459.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 104 MAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMR 183 (1350)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 183 (1350)
+.++++++++.+++.+..|++++.++|.+.....+ ...+..+..++++++++..++.+++.++..+.+.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEP----LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777888888899999976311111 11223334445555666778889999999999999999999
Q ss_pred HHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000687 184 IKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAV 263 (1350)
Q Consensus 184 ~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~ 263 (1350)
.++|++++++|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+.++
T Consensus 81 ~~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999988 9999999999999999999998888999998888888999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 264 IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVF 343 (1350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1350)
+..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999998888877777766666666666666
Q ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCC
Q 000687 344 CSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDS 423 (1350)
Q Consensus 344 ~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 423 (1350)
+..++++.++++.+.+|.++.|.+++++.+......|+..+...+..+++++.+.+|+.++++.+++... .. .....
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~--~~-~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG--KA-PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc-CCCCC
Confidence 6666655667777779999999999888777777889999999999999999999999999985433211 11 11111
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHh
Q 000687 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
..+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999853 34799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 504 QQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
++|+||+|+|++|++||+|||.++.++.++++++++++.+++++++.++|+|+||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVL 637 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl 637 (1350)
+|+|||||||||+||+++++.+.+.|.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 62
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-76 Score=675.52 Aligned_cols=503 Identities=25% Similarity=0.346 Sum_probs=435.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 155 VVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLA 234 (1350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~ 234 (1350)
.+++...+..|...+..+....++..++|.++|+++...+..-..+. ++||+++|+..|++.+++.+-..+...+..+.
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~-r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~ 144 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRY-RSGDLLNRLVADVDALDNLYLRVIAPAVVALV 144 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhc-ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHH
Confidence 34666778888888889999999999999999999999999998877 99999999999999999999888888888877
Q ss_pred HHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHH
Q 000687 235 TFVTGFAVGFSAVWQLALVTLA-VVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAY 313 (1350)
Q Consensus 235 ~~~~~~i~~~~~~~~l~lv~l~-~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~ 313 (1350)
...+..+.+-+++|.+++.+.. ++.+.+++..++.+..++..++..+..+...+.+.|.+.|....+.||+++.+.+.+
T Consensus 145 ~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l 224 (573)
T COG4987 145 LIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTAL 224 (573)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHH
Confidence 7777777777889988875544 344555667778888888888888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000687 314 SSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYA-LLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAA-PSISAF 391 (1350)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~ 391 (1350)
........+...+...+.++...+..++..+..+ .++|.++ .+..|..+......+++.++....++..+. ..+...
T Consensus 225 ~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 225 EATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9998888888888888888887777776666555 4455443 344566554333333333233333343444 556788
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHH
Q 000687 392 AKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKST 471 (1350)
Q Consensus 392 ~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKST 471 (1350)
.+...|+.|+.++++.+++...+ .+ ......+ .++++||+|+||+. +.++|+|+||++++||++||+|+|||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~-~~-~~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFP-DE-QTATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCC-cc-ccCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 89999999999999998876432 11 1111112 79999999999864 457999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhc
Q 000687 472 VVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIK 551 (1350)
Q Consensus 472 l~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~ 551 (1350)
|+++|.|.|+|++|+|.++|.++..++.+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++.+++++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhc
Q 000687 552 LPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKA 631 (1350)
Q Consensus 552 l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~ 631 (1350)
.|+|++|.+||.|..||||||||++|||+|++|+|++||||||.+||++||+.+.+.|.+..+|||+|+||||+..+..|
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~ 539 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERM 539 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000687 632 DVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 632 D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~ 665 (1350)
|||+||++|+|+|+|+|.+|+++ +|.|+++++
T Consensus 540 drIivl~~Gkiie~G~~~~Ll~~--~g~~~~l~q 571 (573)
T COG4987 540 DRIIVLDNGKIIEEGTHAELLAN--NGRYKRLYQ 571 (573)
T ss_pred CEEEEEECCeeeecCCHHhhhcc--ccHHHHHhc
Confidence 99999999999999999999997 899998874
No 63
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-79 Score=675.17 Aligned_cols=493 Identities=31% Similarity=0.423 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHH
Q 000687 821 HSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVA-CTAGFV 899 (1350)
Q Consensus 821 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~-~~~~~~ 899 (1350)
..+|...++.+.+.+--+.|.|+.+.++.|+-+ ..+|.+...+......++..+...+...+..++-+... +.....
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 345667788888889999999999999999864 45565555444445455555544444444444333333 334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000687 900 LQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCF 979 (1350)
Q Consensus 900 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 979 (1350)
++||.+.+.++++.+++++.+...-+.-.+.+++..+.+.++....+++-+.+|+|.|+-|+.+..+|...++...+...
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 79999999999998888887777777777788889999999999999999999999999999999999999998887776
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000687 980 WKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLL 1059 (1350)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l 1059 (1350)
+.....++.......+.......+...+...+..|.+|.|.++..-..+.....|+..+.....++.++...+++.++++
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 66555555555555556666677777888888999999999887777777777777777777888889999999999998
Q ss_pred ccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc
Q 000687 1060 DRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS 1139 (1350)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~ 1139 (1350)
+.+.+..... +..+..+...|.|.|+||+|.|.+ ..|+|+|+||++++|+++||||+||+||||+.++|+||||+++
T Consensus 241 ~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 241 DVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred ccchhhccCC-CCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 8776654322 111111134688999999999964 4689999999999999999999999999999999999999999
Q ss_pred cEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCC
Q 000687 1140 GRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERG 1219 (1350)
Q Consensus 1140 G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G 1219 (1350)
|.|.|||+|++++..+++|+.||+||||.+||+.|+..|+.||+|+++++|++.|++.+++++||.++|+||||.|||+|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEee
Q 000687 1220 VQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1220 ~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE 1299 (1350)
-.||||||||+||||++|++|+||+||||||+||..||++||.+|++..+|+|.++|||||+||.+||.|+||++|+|+|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~e 477 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVE 477 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhhcCCCchhHHHHH
Q 000687 1300 LGSHSHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1300 ~Gt~~eLl~~~~~g~y~~l~~ 1320 (1350)
.|+|+||+++ +|.|++||.
T Consensus 478 rg~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 478 RGTHEELLAA--GGLYAEMWR 496 (497)
T ss_pred cCcHHHHHHc--CChHHHHhc
Confidence 9999999998 899999996
No 64
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-78 Score=670.94 Aligned_cols=491 Identities=33% Similarity=0.437 Sum_probs=441.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh
Q 000687 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGF-AVGFSAV 247 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~ 247 (1350)
.++..+++.....+--+.|.|+.++++.|+-++ .+|.+...+.....-|+..+...+...+..++-+.... ++...++
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 456677888888888899999999999999887 89998888888887888777777777777766554444 4445689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000687 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|+.++++++++.++.++......+.....+...++.++++....+++-+..+||.|+.|+.+..+|...++.+.+...+.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999999999998888877777777778888889999999999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
....++.......+.......+...++..+..|.+|.|+++..-.++.....|+..+...+.++.+++.-.|+.+++++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 77666665555556666667777888888999999999999888888888889999999999999999999999999998
Q ss_pred CCCCCCCCCCCccCC-CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000687 408 KPSIDRNSESGLELD-SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~-~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
+.+..+. +...+.. ...|.+.|+||+|.|. +.+++|+++||++++|+++|+|||||+||||++++|.|||++++|.
T Consensus 243 ~~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 243 EAEVSDA-PDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred chhhccC-CCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 7776432 2222222 3467899999999997 4568999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCC
Q 000687 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~ 566 (1350)
|.+||+|+++....++|+.||+||||..||++|+..||.||+|.++++|++.+++.+++++||..+|+||+|.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
|||||||||||||+++++|+||+|||+|||||.+||+.||.+|++..+|+|.++|+|||+|+.+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000687 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l~~ 665 (1350)
+|+||+++ +|.|++||.
T Consensus 480 ~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA--GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc--CChHHHHhc
Confidence 99999998 899999985
No 65
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.8e-75 Score=729.25 Aligned_cols=534 Identities=25% Similarity=0.317 Sum_probs=459.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 104 MAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMR 183 (1350)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 183 (1350)
+++.++++++..++....|++++.++|..... .+. ..+..+...++++.++..++.+++.++..+.+.++..++|
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~-~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTS-GSV----PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-Cch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555666666677788889865421 111 1222233344444555677888888999999999999999
Q ss_pred HHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000687 184 IKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISE-KLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIA 262 (1350)
Q Consensus 184 ~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~ 262 (1350)
.++|+|++++|+. ..+...+++++|++.+++.+.. .+..++..++.++ .++++++++|++++++++.+|+++
T Consensus 83 ~~~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 83 QPIFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999983 2356788999999999998877 4555555555444 456788999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 263 VIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVV 342 (1350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1350)
++..++.+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+.....+....+..++.
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88778888888888889999999999999999999999999999999999999999988888887777777777777777
Q ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC
Q 000687 343 FCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD 422 (1350)
Q Consensus 343 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~ 422 (1350)
.+..++++++|++++.+|.+|.|.+++++.+......|+..+...+..+++++.+.+|+.++++.+++.+. . ...+
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~-~~~~ 311 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---A-MPLP 311 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---C-CCCC
Confidence 77778888999999999999999999998888888889999999999999999999999999987654321 1 1112
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH
Q 000687 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
...+.|+++||+|+|++. ++++|+|+||++++||+++||||||||||||+++|+|+|+|++|+|.+||+++.+++.+++
T Consensus 312 ~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 234679999999999743 3479999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 503 RQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
|++++||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999887778899999999999999999999999999999999999999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|+|||||||||+||+++++.+.+.|.++. +++|+|+||||++++..||+|++|++|++++.|+|++++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 9999999999999999999999999999885 68999999999999989999999999999999999999753
No 66
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=4.2e-75 Score=727.09 Aligned_cols=526 Identities=26% Similarity=0.343 Sum_probs=453.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 758 YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVRE 837 (1350)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 837 (1350)
.+.++++++++.+++.+..+++.+++++........ ......+...++++.++..++.+++.++....+.++..++|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566667777777778888888888766322111 122334455566667778888999999999999999999999
Q ss_pred HHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 838 KMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVA 917 (1350)
Q Consensus 838 ~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~ 917 (1350)
++|+++++.|..||++ +++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++.+|+.++
T Consensus 82 ~l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999985 78999999999999999999999999999999888999999999999999999998888877
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000687 918 ATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLY 997 (1350)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1350)
+.+...++.+...++.++...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+..........+.+++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666667777777888899999999999999999999999999998888777766666666555555555555
Q ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCC
Q 000687 998 ASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPD 1077 (1350)
Q Consensus 998 ~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~ 1077 (1350)
+...+...++++.+..|.++++.++.+..+......++..+......+.++..+++|+.++++.+++..+. . +.+.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~--~--~~~~ 315 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK--A--PVTA 315 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--c--CCCC
Confidence 55555555566666689999999888877777788888888889999999999999999999854322111 1 1111
Q ss_pred CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh
Q 000687 1078 RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1078 ~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l 1157 (1350)
...+.|+|+||+|+||+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++
T Consensus 316 ~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~l 394 (529)
T TIGR02857 316 APAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSW 394 (529)
T ss_pred CCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHH
Confidence 123679999999999854 3479999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1158 RRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
|++++||||||.+|++||||||.++.++++|++++++++.++++++++++|+||||.+||+|.+||||||||++||||++
T Consensus 395 r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~ 474 (529)
T TIGR02857 395 RDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFL 474 (529)
T ss_pred HhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEE
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVI 1292 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl 1292 (1350)
++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 475 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 475 RDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999999988899999999999999999999986
No 67
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.7e-77 Score=701.53 Aligned_cols=485 Identities=30% Similarity=0.477 Sum_probs=374.6
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC----CcEEEECCeeCCCCCHHH
Q 000687 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT----SGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~i~g~~~~~~~~~~ 501 (1350)
.++++|++..|..... .++++||||++.+||++||||+|||||||+.+.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975422 25999999999999999999999999999999999999987 899999999999888765
Q ss_pred Hh----cceEEEcccCc-cccc--cHHHHhhc----CCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 502 LR----QQIGLVSQEPA-LFAT--TIKENILL----GRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~-lf~~--ti~~Ni~~----g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
+| +.|+||||+|. .+|. ||.+-|.- ... .+.++.. .+...+.+. .++|+-... +..+.+||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~ea~--~~a~elL~~-Vgl~~~~~~--~~yPheLSGG 158 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAEAR--KRAVELLEQ-VGLPDPERR--DRYPHQLSGG 158 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHHHH--HHHHHHHHH-cCCCChhhh--ccCCcccCch
Confidence 53 57999999984 4443 66666542 111 1111111 111111221 234443332 5688999999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
||||+.||+||+.+|++||+||||++||+.+++.|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.|+
T Consensus 159 ~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~ 238 (539)
T COG1123 159 MRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGP 238 (539)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999999999986 58999999999999977 99999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccC
Q 000687 648 HDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAT 727 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1350)
.++++.++.+.+-+.++...
T Consensus 239 ~~~i~~~p~hpYT~~Ll~a~------------------------------------------------------------ 258 (539)
T COG1123 239 TEEILSNPQHPYTRGLLAAV------------------------------------------------------------ 258 (539)
T ss_pred HHHHHhccCCcccHHHHhhC------------------------------------------------------------
Confidence 99998764222111111000
Q ss_pred CCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHH
Q 000687 728 YPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLI 807 (1350)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1350)
T Consensus 259 -------------------------------------------------------------------------------- 258 (539)
T COG1123 259 -------------------------------------------------------------------------------- 258 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHH
Q 000687 808 GLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNT 887 (1350)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~ 887 (1350)
| ..+....
T Consensus 259 ---------------------------------------p--~~~~~~~------------------------------- 266 (539)
T COG1123 259 ---------------------------------------P--RLGDEKI------------------------------- 266 (539)
T ss_pred ---------------------------------------C--Ccccccc-------------------------------
Confidence 0 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHH
Q 000687 888 ALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLF 967 (1350)
Q Consensus 888 ~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~ 967 (1350)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 968 SSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIK 1047 (1350)
Q Consensus 968 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1350)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC--------CCCcccceeEEEeCCCEEEEEcC
Q 000687 1048 GGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRP--------DIPIFRDLSLRARAGKTLALVGP 1119 (1350)
Q Consensus 1048 ~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaIVG~ 1119 (1350)
...+.. .+ .....-++++|++.+|..+. ...+++||||+|++||++||||.
T Consensus 267 -----------~~~~~~-~~---------~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGe 325 (539)
T COG1123 267 -----------IRLPRR-GP---------LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGE 325 (539)
T ss_pred -----------cccccc-cc---------cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECC
Confidence 000000 00 00111478999999997421 24689999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCCCccEEEECCcc--CCCCChHHhhcccEEEccCCCCC---cccHHHHhccCCC---CC----C
Q 000687 1120 SGCGKSSVIALVQRFYEPSSGRVMIDGKD--IRKYNLKSLRRHMAIVPQEPCLF---ASTIYENIAYGHE---SA----T 1187 (1350)
Q Consensus 1120 SGsGKSTL~~lL~rl~~p~~G~I~idG~d--i~~i~l~~lR~~i~~VpQdp~LF---~gTIreNL~~~~~---~~----t 1187 (1350)
||||||||.++|+|+++|++|+|.++|.| .+.-....+|+++-+|+|||+-. ..||+++|.-.-. .. .
T Consensus 326 SGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~ 405 (539)
T COG1123 326 SGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAER 405 (539)
T ss_pred CCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHH
Confidence 99999999999999999999999999977 33334566888999999999632 4599999863211 11 1
Q ss_pred HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHh
Q 000687 1188 ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRA 1267 (1350)
Q Consensus 1188 deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~ 1267 (1350)
.+.+.+.++.+++.+- .+......||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|+++
T Consensus 406 ~~rv~~ll~~VgL~~~----------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~l 475 (539)
T COG1123 406 RARVAELLELVGLPPE----------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDL 475 (539)
T ss_pred HHHHHHHHHHcCCCHH----------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHH
Confidence 1235555666666531 234455789999999999999999999999999999999999999999999987
Q ss_pred cC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1268 CS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1268 ~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
.+ |.|.|+|||+++.++. ||||+||.+|+|||.|+.+++++. |...|.+..-.
T Consensus 476 q~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~-p~h~Ytr~L~~ 531 (539)
T COG1123 476 QEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFEN-PQHPYTRKLLA 531 (539)
T ss_pred HHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcC-CCChHHHHHHH
Confidence 64 7999999999999976 999999999999999999999887 78889887653
No 68
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4e-74 Score=780.06 Aligned_cols=503 Identities=19% Similarity=0.242 Sum_probs=420.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 157 GAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATF 236 (1350)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~ 236 (1350)
+++..++.+++.+++.+.+.+...++|.++++++++.|+.||+++ ++|+++||+++|++.+++.+...+..++..++.+
T Consensus 935 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~ 1013 (1490)
T TIGR01271 935 ADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIV 1013 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455667788888889999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHH
Q 000687 237 VTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSA 316 (1350)
Q Consensus 237 ~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~ 316 (1350)
++.++++++++|++++++++++.+++++..++.+..++..+......+++.+++.|++.|+.+||+|++++.+.++|.+.
T Consensus 1014 i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~ 1093 (1490)
T TIGR01271 1014 LGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKA 1093 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHH
Confidence 99999999999988776555555556666777777788888888888999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 317 LKVAQRLGYKSGFAKGMGLGATYFVVFCSY--ALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKA 394 (1350)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 394 (1350)
.+...+..+.......+......++..+.. +++++++.. ..+.|.+..++.+.+....++.++...+..+..+
T Consensus 1094 ~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~ 1168 (1490)
T TIGR01271 1094 LNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGL 1168 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887655444333322222222222111111 112222322 2233333333334444455677888888999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCC--------------ccC--CCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCE
Q 000687 395 KVAAAKIFRIIDHKPSIDRNSESG--------------LEL--DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKT 458 (1350)
Q Consensus 395 ~~s~~ri~~~l~~~~~~~~~~~~~--------------~~~--~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~ 458 (1350)
+.|++||.++++.++|.+...+.. ..+ -+..|.|+|+||+|+|++. .+++|+|+||+|++||+
T Consensus 1169 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gek 1247 (1490)
T TIGR01271 1169 MRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQR 1247 (1490)
T ss_pred HHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCE
Confidence 999999999998766532111100 001 1235789999999999753 45799999999999999
Q ss_pred EEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHH
Q 000687 459 IALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEE 538 (1350)
Q Consensus 459 ~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~ 538 (1350)
+||||+||||||||+++|+|+++ ++|+|+|||+|+++++.+.+|++|+||||||.||+||||+||.+.. .++++++++
T Consensus 1248 vaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~ 1325 (1490)
T TIGR01271 1248 VGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWK 1325 (1490)
T ss_pred EEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHH
Confidence 99999999999999999999997 7999999999999999999999999999999999999999998764 478999999
Q ss_pred HHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeE
Q 000687 539 AARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTT 618 (1350)
Q Consensus 539 ~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~ 618 (1350)
|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+
T Consensus 1326 aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~Tv 1405 (1490)
T TIGR01271 1326 VAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTV 1405 (1490)
T ss_pred HHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred EEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHHh
Q 000687 619 LVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAA 670 (1350)
Q Consensus 619 i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~ 670 (1350)
|+||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+...
T Consensus 1406 I~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1406 ILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADRL 1455 (1490)
T ss_pred EEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhChh
Confidence 999999999999999999999999999999999975 79999998766543
No 69
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.9e-73 Score=712.75 Aligned_cols=535 Identities=24% Similarity=0.340 Sum_probs=457.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 758 YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVRE 837 (1350)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 837 (1350)
.++..++++++..++..+.++++..+++....... ......+..+++++.++..++.+++.++....+.++..++|.
T Consensus 7 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 7 TFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555666666666677777777775542211 112233444555566667788889999999999999999999
Q ss_pred HHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 838 KMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGD-RIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVV 916 (1350)
Q Consensus 838 ~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~-~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~ 916 (1350)
++|+++++.|+..+ +...+++.+|++.+++.+.. .+..++..++.+ +.++++++++|++++++++.+|+++
T Consensus 84 ~~~~~ll~~~~~~~-------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 84 PIFAASFSATLRRG-------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMP-IYLLVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHhcCcccCc-------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999998432 45688899999999998877 444444444443 4456788999999999888888777
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000687 917 AATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCL 996 (1350)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1350)
+..++..+..++..++.++..++..+++.|+++|+++||+|+.|+.+.++|.+..++..+...+.....+....+...+.
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666777778888899999999999999999999999999999999888877777777777777777777
Q ss_pred HHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCC
Q 000687 997 YASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVP 1076 (1350)
Q Consensus 997 ~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~ 1076 (1350)
.+..++.+++|++++..|.+++|.++++..+......++..+......+.++..+.+|+.++++.+++.++. . ..
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~-~~- 310 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---M-PL- 310 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---C-CC-
Confidence 778888899999999999999999999888888888999999999999999999999999999766543211 1 11
Q ss_pred CCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH
Q 000687 1077 DRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1077 ~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~ 1156 (1350)
+...+.|+++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+.+++.+.
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 1234679999999999753 347999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 1157 LRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARAL 1236 (1350)
+|++++||||||++|++|++|||.++.+++++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999988777899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1237 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+++|+|||||||||+||+++++.+.+.|++.. +|+|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 99999999999999999999999999999875 68999999999999999999999999999999999999864
No 70
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=5.6e-72 Score=699.12 Aligned_cols=534 Identities=17% Similarity=0.164 Sum_probs=441.7
Q ss_pred hHHHHHHhhC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFAD-SLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 88 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
.+++++++++ ++ ++.++++++++++.+++....|.+++.+++.... .. . . ...+++++.++.+++.++
T Consensus 4 ~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~-~---~----~~~~~~~~~~~~~~~~~~ 72 (555)
T TIGR01194 4 AIGEILALLRSPF-PAITAFSIALGLAGGLAIIALLASINNAIHEENF--LG-Q---G----SLFSFGGLCLLALLFRIG 72 (555)
T ss_pred hHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cc-c---h----HHHHHHHHHHHHHHHHHH
Confidence 4677888887 65 4455666677777777766777777777653210 00 0 0 111233344455677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 246 (1350)
..++....+.++..++|.++|+|++++|+.||++. ++|++++|+++|++.+++++.. +..++..++++++.+++++++
T Consensus 73 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 150 (555)
T TIGR01194 73 ADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYL 150 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999988 9999999999999999998864 777888888888889999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHH--HHHHHHHHHHHHHHHHH
Q 000687 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGES--KALQAYSSALKVAQRLG 324 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~--~~~~~~~~~~~~~~~~~ 324 (1350)
+|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|+++||+|+.++ .+.++|.+..++..+..
T Consensus 151 ~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (555)
T TIGR01194 151 SVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLH 230 (555)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999988888888788888888888999999999999999999999999954 56778888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRI 404 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 404 (1350)
.+.........++..++..+...+++++|++. |.++.|.+++++.+......|+..+...+..+++++++++|+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~l 307 (555)
T TIGR01194 231 IIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADF 307 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66655554444444444444455555666543 789999999998888888899999999999999999999999999
Q ss_pred HccCCCCCCC---CC-CCc---cCCCCcceEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHH
Q 000687 405 IDHKPSIDRN---SE-SGL---ELDSVSGLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSL 475 (1350)
Q Consensus 405 l~~~~~~~~~---~~-~~~---~~~~~~g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~l 475 (1350)
++.+++.+.. +. ... +.....+.|+++||+|+|++.+ +.++|+|+||++++||++|||||||||||||+++
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~l 387 (555)
T TIGR01194 308 GERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKL 387 (555)
T ss_pred HhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHH
Confidence 8632111000 00 000 1112246799999999997532 2369999999999999999999999999999999
Q ss_pred HhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCC
Q 000687 476 IERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDG 555 (1350)
Q Consensus 476 l~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g 555 (1350)
|+|+|+|++|+|.+||.|+++++.+++|++++||+|||++|++|+++|+ .+++++++++++++.+++++++..+|+|
T Consensus 388 l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g 464 (555)
T TIGR01194 388 FCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGG 464 (555)
T ss_pred HhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccc
Confidence 9999999999999999999999999999999999999999999999995 4567888999999999999999999999
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHH-Hh-cCCCeEEEEccCchhhhhcCE
Q 000687 556 FDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALD-RF-MIGRTTLVIAHRLSTIRKADV 633 (1350)
Q Consensus 556 ~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~D~ 633 (1350)
|||. .+|||||||||+||||++++|+|||||||||+||+++++.+++.+. .+ .+++|+|+||||++++..||+
T Consensus 465 ~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~ 539 (555)
T TIGR01194 465 FSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQ 539 (555)
T ss_pred cCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCE
Confidence 9994 6899999999999999999999999999999999999999988764 34 468999999999999999999
Q ss_pred EEEEeCCEEEEe
Q 000687 634 VAVLQQGSVSEI 645 (1350)
Q Consensus 634 i~vl~~G~i~~~ 645 (1350)
|++|++|+++|.
T Consensus 540 i~~l~~G~i~~~ 551 (555)
T TIGR01194 540 IIKLAAGCIVKD 551 (555)
T ss_pred EEEEECCEEEEe
Confidence 999999999874
No 71
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-74 Score=722.36 Aligned_cols=502 Identities=24% Similarity=0.372 Sum_probs=370.9
Q ss_pred ceEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC---------
Q 000687 426 GLIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--------- 495 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--------- 495 (1350)
..|+++|++++|+... ..++|+|+||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3799999999996321 246999999999999999999999999999999999999999999999997552
Q ss_pred -CCCHH---HHh-cceEEEcccC--cccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCcc---cccc
Q 000687 496 -SLKLR---WLR-QQIGLVSQEP--ALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD---TQVG 561 (1350)
Q Consensus 496 -~~~~~---~~r-~~i~~v~Q~~--~lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~v~ 561 (1350)
+.+.. .+| ++||||+|+| .++. .||+|||.++.. ..+..+..+ .+.+.+..+ |+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 163 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQV--RIPEAQTILS 163 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChhhHHh
Confidence 22222 233 5799999998 5665 499999987531 112222111 122333333 442 3466
Q ss_pred CCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEe
Q 000687 562 ERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQ 638 (1350)
Q Consensus 562 ~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~D~i~vl~ 638 (1350)
....+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|+|||+++.+.. ||+|++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 7788999999999999999999999999999999999999999999999885 3 8999999999999865 99999999
Q ss_pred CCEEEEecChHHHHhccCCcHHH-HHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcC
Q 000687 639 QGSVSEIGTHDELIAKGENGVYA-KLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFST 717 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1350)
+|+|++.|++++++..+. ..|. .+... .+.... . .+
T Consensus 244 ~G~i~~~g~~~~~~~~~~-~~~~~~l~~~-----------------~~~~~~-~-----------~~------------- 280 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQ-HPYTRALLAA-----------------VPQLGA-M-----------KG------------- 280 (623)
T ss_pred CCeecccCCHHHhhcCCC-Chhhhhhhhc-----------------cCcccc-c-----------cc-------------
Confidence 999999999888764311 1110 00000 000000 0 00
Q ss_pred CccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHH
Q 000687 718 SDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIR 797 (1350)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1350)
.
T Consensus 281 --------------------------------------------------------------------------~----- 281 (623)
T PRK10261 281 --------------------------------------------------------------------------L----- 281 (623)
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHH
Q 000687 798 EIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIG 877 (1350)
Q Consensus 798 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~ 877 (1350)
..+-. +.. .. .
T Consensus 282 -----------------------------------------------~~~~~-~~~----~~---------~-------- 292 (623)
T PRK10261 282 -----------------------------------------------DYPRR-FPL----IS---------L-------- 292 (623)
T ss_pred -----------------------------------------------cCCcc-ccc----cc---------c--------
Confidence 00000 000 00 0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHh
Q 000687 878 DRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAF 957 (1350)
Q Consensus 878 ~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~ 957 (1350)
T Consensus 293 -------------------------------------------------------------------------------- 292 (623)
T PRK10261 293 -------------------------------------------------------------------------------- 292 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Q 000687 958 NSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAE 1037 (1350)
Q Consensus 958 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1350)
.. ..
T Consensus 293 --------------~~---------------------------------------~~----------------------- 296 (623)
T PRK10261 293 --------------EH---------------------------------------PA----------------------- 296 (623)
T ss_pred --------------cc---------------------------------------cc-----------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC--------CCCcccceeEEEe
Q 000687 1038 TLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRP--------DIPIFRDLSLRAR 1109 (1350)
Q Consensus 1038 ~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~--------~~~vL~~vsl~I~ 1109 (1350)
...+..... . .. ....-++++||+++|+.+. ..++|+||||+|+
T Consensus 297 ---------------------~~~~~~~~~----~-~~--~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~ 348 (623)
T PRK10261 297 ---------------------KQEPPIEQD----T-VV--DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLW 348 (623)
T ss_pred ---------------------ccCcccccc----c-cc--CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEc
Confidence 000000000 0 00 0011489999999996321 1369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---HhhcccEEEccCC--CCCc-ccHHHHhccCC
Q 000687 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRRHMAIVPQEP--CLFA-STIYENIAYGH 1183 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR~~i~~VpQdp--~LF~-gTIreNL~~~~ 1183 (1350)
+||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++. .|+.+|+.++.
T Consensus 349 ~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~ 428 (623)
T PRK10261 349 PGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPL 428 (623)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999877643 4678899999998 3664 59999997531
Q ss_pred --CCC-CH----HHHHHHHHHhcch-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHH
Q 000687 1184 --ESA-TE----SEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAE 1255 (1350)
Q Consensus 1184 --~~~-td----eei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~ 1255 (1350)
... .. +++.+.++..++. +... .....||||||||++|||||+.+|+|||||||||+||+.
T Consensus 429 ~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~-----------~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~ 497 (623)
T PRK10261 429 RVHGLLPGKAAAARVAWLLERVGLLPEHAW-----------RYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVS 497 (623)
T ss_pred HHcCCCCHHHHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 111 11 3455556666653 2322 334579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCCchhHH-HHHh
Q 000687 1256 SERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYAR-MIQL 1321 (1350)
Q Consensus 1256 te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~-l~~~ 1321 (1350)
+...|.+.|++.. .|.|+|+|||+++.+.. ||||+||++|+|+|.|++++++.. +...|.+ ++..
T Consensus 498 ~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~-p~~~~~~~l~~~ 566 (623)
T PRK10261 498 IRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN-PQHPYTRKLMAA 566 (623)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC-CCCHHHHHHHhh
Confidence 9999999998864 37899999999999865 999999999999999999999875 5666755 4443
No 72
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-73 Score=707.94 Aligned_cols=462 Identities=24% Similarity=0.411 Sum_probs=358.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCeeCCCCCHHH-Hh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP--TSGQVLLDGHDIKSLKLRW-LR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~i~g~~~~~~~~~~-~r 503 (1350)
+|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 6999999999963 3699999999999999999999999999999999999996 8999999999998776553 46
Q ss_pred cceEEEcccCccccc-cHHHHhhcCCCC-----CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 504 QQIGLVSQEPALFAT-TIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
+++|||+|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999987431 12122211 123344444 55555566778999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+.+|+|||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 58999999999999875 999999999999987764332100
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhh
Q 000687 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
+.++
T Consensus 234 ------~~~~---------------------------------------------------------------------- 237 (506)
T PRK13549 234 ------DIIT---------------------------------------------------------------------- 237 (506)
T ss_pred ------HHHH----------------------------------------------------------------------
Confidence 0000
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000687 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
.
T Consensus 238 --------------------------------------------------~----------------------------- 238 (506)
T PRK13549 238 --------------------------------------------------M----------------------------- 238 (506)
T ss_pred --------------------------------------------------H-----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000687 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~ 895 (1350)
++..+ .
T Consensus 239 ----------------------------------~~~~~---~------------------------------------- 244 (506)
T PRK13549 239 ----------------------------------MVGRE---L------------------------------------- 244 (506)
T ss_pred ----------------------------------hhCcC---c-------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000687 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv 1055 (1350)
.+
T Consensus 245 -----------------------------------------------------------------------------~~- 246 (506)
T PRK13549 245 -----------------------------------------------------------------------------TA- 246 (506)
T ss_pred -----------------------------------------------------------------------------cc-
Confidence 00
Q ss_pred HHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000687 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~ 1135 (1350)
. .+.. .. .. ...-|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|++
T Consensus 247 --~--~~~~-~~------~~---~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~ 312 (506)
T PRK13549 247 --L--YPRE-PH------TI---GEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAY 312 (506)
T ss_pred --c--cccc-cc------CC---CCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCC
Confidence 0 0000 00 00 011489999999995322346999999999999999999999999999999999999
Q ss_pred C-CCccEEEECCccCCCCCh-HHhhcccEEEccCC---CCC-cccHHHHhccCCC-C------CCHHHHHHHHHHhcchH
Q 000687 1136 E-PSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLF-ASTIYENIAYGHE-S------ATESEIIEAARLANADK 1202 (1350)
Q Consensus 1136 ~-p~~G~I~idG~di~~i~l-~~lR~~i~~VpQdp---~LF-~gTIreNL~~~~~-~------~tdeei~~al~~a~l~~ 1202 (1350)
+ |++|+|.++|.++...+. +.+|++++||||+| .+| ..|+.||+.++.. . .+.++. ...+.+
T Consensus 313 ~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~ 387 (506)
T PRK13549 313 PGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILE 387 (506)
T ss_pred CCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHH
Confidence 9 599999999999865543 45677899999997 355 4699999986421 0 111111 111233
Q ss_pred HHhcCCCCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCc
Q 000687 1203 FISSLPDGYKT-FVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRL 1280 (1350)
Q Consensus 1203 ~I~~lp~Gldt-~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRl 1280 (1350)
+++.+ |++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|||+|||++
T Consensus 388 ~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~ 465 (506)
T PRK13549 388 SIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSEL 465 (506)
T ss_pred HHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCH
Confidence 34443 3321 2334456799999999999999999999999999999999999999999998764 589999999999
Q ss_pred hHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1281 STIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1281 sti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+.+.. ||++++|++|+++..|+++++.
T Consensus 466 ~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 466 PEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 99865 9999999999999999988774
No 73
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.4e-72 Score=702.04 Aligned_cols=465 Identities=28% Similarity=0.457 Sum_probs=358.6
Q ss_pred eEEEEEEEEECCCC-CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHH
Q 000687 427 LIELKHVDFSYPSR-PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++|++++|++. ...++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 69999999999631 124699999999999999999999999999999999999987 799999999999877643
Q ss_pred H---Hh-cceEEEcccCc--ccc-ccHHHHhhcCC---CCCCHHHHHHHHHHHchHHHHhcCCCCccc---cccCCCCCC
Q 000687 501 W---LR-QQIGLVSQEPA--LFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFDT---QVGERGVQL 567 (1350)
Q Consensus 501 ~---~r-~~i~~v~Q~~~--lf~-~ti~~Ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~v~~~g~~L 567 (1350)
. +| ++||||+|+|. ++. .|+++|+.++. ...+.++..+ .+.+.+..+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG-----EILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 58999999985 444 49999986421 0112222111 112333333 4432 345677899
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~ 644 (1350)
|||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999874 38999999999999875 99999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCcccccc
Q 000687 645 IGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSL 724 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1350)
.|+++++.... ...+.
T Consensus 238 ~g~~~~~~~~~-~~~~~--------------------------------------------------------------- 253 (529)
T PRK15134 238 QNRAATLFSAP-THPYT--------------------------------------------------------------- 253 (529)
T ss_pred eCCHHHHhhCC-CCHHH---------------------------------------------------------------
Confidence 99877664320 00000
Q ss_pred ccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 000687 725 DATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCY 804 (1350)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1350)
.
T Consensus 254 --------------------------------------------------------------------~----------- 254 (529)
T PRK15134 254 --------------------------------------------------------------------Q----------- 254 (529)
T ss_pred --------------------------------------------------------------------H-----------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHH
Q 000687 805 LLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIV 884 (1350)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~ 884 (1350)
.++ ..+ +
T Consensus 255 ---------------------------------~~~----~~~---------~--------------------------- 261 (529)
T PRK15134 255 ---------------------------------KLL----NSE---------P--------------------------- 261 (529)
T ss_pred ---------------------------------HHH----HhC---------c---------------------------
Confidence 000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHH
Q 000687 885 QNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIV 964 (1350)
Q Consensus 885 ~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~ 964 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 965 GLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD 1044 (1350)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCC--------CCCCcccceeEEEeCCCEEEE
Q 000687 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSR--------PDIPIFRDLSLRARAGKTLAL 1116 (1350)
Q Consensus 1045 ~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaI 1116 (1350)
+ ..+...+ . . ...-|+++||+++|+.. .+.++|+|+||+|++||++||
T Consensus 262 ---------~------~~~~~~~--~----~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i 317 (529)
T PRK15134 262 ---------S------GDPVPLP--E----P---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGL 317 (529)
T ss_pred ---------c------ccccccC--C----C---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEE
Confidence 0 0000000 0 0 01148999999999621 124699999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hhcccEEEccCC--CCCc-ccHHHHhccCCC----CC
Q 000687 1117 VGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRRHMAIVPQEP--CLFA-STIYENIAYGHE----SA 1186 (1350)
Q Consensus 1117 VG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR~~i~~VpQdp--~LF~-gTIreNL~~~~~----~~ 1186 (1350)
+|+||||||||+++|.|++ |++|+|++||.++...+... +|++++||||+| .+|. .|++||+.++.. ..
T Consensus 318 ~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~ 396 (529)
T PRK15134 318 VGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTL 396 (529)
T ss_pred ECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccC
Confidence 9999999999999999998 48999999999998766543 477899999998 3665 599999986421 01
Q ss_pred C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHH
Q 000687 1187 T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQE 1262 (1350)
Q Consensus 1187 t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~ 1262 (1350)
. ++.+.++++..++.+ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+
T Consensus 397 ~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 466 (529)
T PRK15134 397 SAAQREQQVIAVMEEVGLDP----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILA 466 (529)
T ss_pred ChHHHHHHHHHHHHHcCCCH----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHH
Confidence 1 123445555555431 11223446799999999999999999999999999999999999999999
Q ss_pred HHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1263 ALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1263 ~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
.|++.. .|+|||+|||+++.+.. ||+|++|++|+|++.|++++++..
T Consensus 467 ~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 467 LLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred HHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 999875 37999999999999865 999999999999999999999865
No 74
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-72 Score=697.54 Aligned_cols=459 Identities=23% Similarity=0.396 Sum_probs=353.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 5899999999963 36999999999999999999999999999999999999999999999999998777654 4567
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC----C-----CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD----A-----DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~----~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
++||+|++.+|.. |++||+.++... . +.++..+ .+.+.+..+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988865 999999876421 0 1111111 123334444 555555667789999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999999875 48999999999999875 99999999999998877554321
Q ss_pred ccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhh
Q 000687 654 KGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRH 733 (1350)
Q Consensus 654 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1350)
. ++.+ .
T Consensus 235 ~-------~~~~-------~------------------------------------------------------------ 240 (510)
T PRK09700 235 D-------DIVR-------L------------------------------------------------------------ 240 (510)
T ss_pred H-------HHHH-------H------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred hhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHH
Q 000687 734 EKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAE 813 (1350)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 813 (1350)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000687 814 LLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVA 893 (1350)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~ 893 (1350)
.+.....
T Consensus 241 ------------------------------------~~~~~~~------------------------------------- 247 (510)
T PRK09700 241 ------------------------------------MVGRELQ------------------------------------- 247 (510)
T ss_pred ------------------------------------hcCCCcc-------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHH
Q 000687 894 CTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQT 973 (1350)
Q Consensus 894 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~ 973 (1350)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 974 PLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMR 1053 (1350)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 1053 (1350)
.
T Consensus 248 -------------------------------------------------------------------------------~ 248 (510)
T PRK09700 248 -------------------------------------------------------------------------------N 248 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhc
Q 000687 1054 SVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQR 1133 (1350)
Q Consensus 1054 rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~r 1133 (1350)
+ .....+. +... .....|+++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|
T Consensus 249 ~---~~~~~~~--~~~~-------~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~G 311 (510)
T PRK09700 249 R---FNAMKEN--VSNL-------AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFG 311 (510)
T ss_pred c---ccccccc--cccC-------CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 0 0000000 0000 0011499999999762 38999999999999999999999999999999999
Q ss_pred cCCCCccEEEECCccCCCCCh-HHhhcccEEEccCC---CCCc-ccHHHHhccCCCC-----------CCHHHHHHHHHH
Q 000687 1134 FYEPSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLFA-STIYENIAYGHES-----------ATESEIIEAARL 1197 (1350)
Q Consensus 1134 l~~p~~G~I~idG~di~~i~l-~~lR~~i~~VpQdp---~LF~-gTIreNL~~~~~~-----------~tdeei~~al~~ 1197 (1350)
+++|++|+|.++|.++...+. ..+|++++||||++ .+|. -|+++|+.++... ....+. .
T Consensus 312 l~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~ 386 (510)
T PRK09700 312 VDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----Q 386 (510)
T ss_pred CCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----H
Confidence 999999999999999876543 45678999999984 5665 4999999865210 011110 0
Q ss_pred hcchHHHhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEE
Q 000687 1198 ANADKFISSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIV 1275 (1350)
Q Consensus 1198 a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~ 1275 (1350)
..+.+.++.+ |+. .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|||+
T Consensus 387 ~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~ 464 (510)
T PRK09700 387 RTAENQRELL--ALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILM 464 (510)
T ss_pred HHHHHHHHhc--CCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 1122333332 232 12333445799999999999999999999999999999999999999999998864 5899999
Q ss_pred EccCchHHh-hcCEEEEEeCCEEeeecChhH
Q 000687 1276 VAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1276 IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|||+++.+. .||+|++|++|++++.+++.+
T Consensus 465 vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 465 VSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred EcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 999999875 599999999999999887633
No 75
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=6.3e-70 Score=680.64 Aligned_cols=534 Identities=17% Similarity=0.168 Sum_probs=433.0
Q ss_pred HHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 745 FWRLAKMNS-PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSF 823 (1350)
Q Consensus 745 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (1350)
.++++++.+ +.++.++++++++++.++.....+++++.+++....... .....++++.++..++.++..++
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 76 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ--------GSLFSFGGLCLLALLFRIGADIF 76 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666 777777777777777777766666666655432110000 01112334455566778888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 824 WDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWR 903 (1350)
Q Consensus 824 ~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~ 903 (1350)
...++.+...++|.++|+++++.|+.||++ +++|++++|+++|++.+++.+.. +..++..++.+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 77 PAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999986 78999999999999999998864 677778888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHH--HHHHHHHHHHHHHHHHHHHH
Q 000687 904 LALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSEL--MIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 904 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~~ 981 (1350)
+++++++.+|+.++...+..+..+....+.++..+...+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+.
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999998888877776666555566566777777888999999999999999999954 55677777777666655554
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000687 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~ 1061 (1350)
.........+..++.++..++.+|++.+. |.++++.+++++.+......++..+......+.++..+++|+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~ 310 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGER 310 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444444444455555555555555543 788999988888888888999999999999999999999999999764
Q ss_pred ccCCCCC--CCC-CCC---CCCCCCCcEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhc
Q 000687 1062 KTEIEPD--DPD-ATP---VPDRLRGEVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQR 1133 (1350)
Q Consensus 1062 ~~~~~~~--~~~-~~~---~~~~~~g~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~r 1133 (1350)
+.+.++. .+. ... .+....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g 390 (555)
T TIGR01194 311 FNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG 390 (555)
T ss_pred hccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 2211110 010 000 1112346899999999997532 2369999999999999999999999999999999999
Q ss_pred cCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccc
Q 000687 1134 FYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKT 1213 (1350)
Q Consensus 1134 l~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt 1213 (1350)
+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+ .+++++++++++++.+++++++.++|+||||
T Consensus 391 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t 467 (555)
T TIGR01194 391 LYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFST 467 (555)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCC
Confidence 9999999999999999999999999999999999999999999996 3567899999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHH-Hh-cCCceEEEEccCchHHhhcCEEEE
Q 000687 1214 FVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALD-RA-CSGKTTIVVAHRLSTIRNAHVIAV 1291 (1350)
Q Consensus 1214 ~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~-~~-~~g~TvI~IaHRlsti~~~DrI~V 1291 (1350)
. .+|||||||||+||||++++|+|||||||||+||++||+.+++.+. +. .+++|+|+||||++++..||+|+|
T Consensus 468 ~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~ 542 (555)
T TIGR01194 468 T-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIK 542 (555)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEE
Confidence 4 6899999999999999999999999999999999999999998764 33 468999999999999999999999
Q ss_pred EeCCEEeee
Q 000687 1292 IDDGKVAEL 1300 (1350)
Q Consensus 1292 l~~G~IvE~ 1300 (1350)
|++|+|+|.
T Consensus 543 l~~G~i~~~ 551 (555)
T TIGR01194 543 LAAGCIVKD 551 (555)
T ss_pred EECCEEEEe
Confidence 999999974
No 76
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-71 Score=610.22 Aligned_cols=472 Identities=33% Similarity=0.515 Sum_probs=368.2
Q ss_pred eEEEEEEEEECCC-CCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHH
Q 000687 427 LIELKHVDFSYPS-RPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~ 500 (1350)
.++++|++..|.. .....++++|||+|++||++||||+||||||-..+.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4789998888852 2345799999999999999999999999999999999999864 379999999999998888
Q ss_pred HHhc----ceEEEcccCc--ccc-ccHHHHh----hcCCCC---CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCC
Q 000687 501 WLRQ----QIGLVSQEPA--LFA-TTIKENI----LLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQ 566 (1350)
Q Consensus 501 ~~r~----~i~~v~Q~~~--lf~-~ti~~Ni----~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~ 566 (1350)
.+|. +|+++||||. |-+ -||...| .+-..- +-.+++.+.++.++ +|+ -...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~Vg-------I~~-p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVG-------IPE-PEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcC-------CCc-hhhhhhhCCcc
Confidence 8774 8999999994 222 1554444 332210 01122222222222 222 22356677899
Q ss_pred CChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000687 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVS 643 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~ 643 (1350)
|||||||||.||.||+.+|++||-||||.|||......|.+.|+++. .|..+++|||+|..++. ||||+||.+|+|+
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 99999999999999999999999999999999999999999999885 48999999999999987 9999999999999
Q ss_pred EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccc
Q 000687 644 EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLS 723 (1350)
Q Consensus 644 ~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 723 (1350)
|.|+.+++.+.+.+.+.+.+...
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~a--------------------------------------------------------- 260 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAA--------------------------------------------------------- 260 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhc---------------------------------------------------------
Confidence 99998888876432222222110
Q ss_pred cccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHH
Q 000687 724 LDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYC 803 (1350)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 803 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHH
Q 000687 804 YLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVI 883 (1350)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~ 883 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHH
Q 000687 884 VQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMI 963 (1350)
Q Consensus 884 ~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 963 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 964 VGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAP 1043 (1350)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC--------CCCcccceeEEEeCCCEEE
Q 000687 1044 DFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRP--------DIPIFRDLSLRARAGKTLA 1115 (1350)
Q Consensus 1044 ~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~--------~~~vL~~vsl~I~~Ge~va 1115 (1350)
+|.-. +.+.+....--++.+||...||-++ ...++++|||+.++||++|
T Consensus 261 ------------------eP~g~-----~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlG 317 (534)
T COG4172 261 ------------------EPSGD-----PPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLG 317 (534)
T ss_pred ------------------CCCCC-----CCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEE
Confidence 00000 0000000111345555555554221 1247999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hhcccEEEccCCC--CC-cccHHHHhccC----CCC
Q 000687 1116 LVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRRHMAIVPQEPC--LF-ASTIYENIAYG----HES 1185 (1350)
Q Consensus 1116 IVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR~~i~~VpQdp~--LF-~gTIreNL~~~----~~~ 1185 (1350)
|||.|||||||+-.+|+|+.+++ |+|.++|.||...+.+. +|+++-+|+|||+ |= ..||.+-|.-| .|.
T Consensus 318 lVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ 396 (534)
T COG4172 318 LVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPK 396 (534)
T ss_pred EEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCC
Confidence 99999999999999999999976 99999999999888765 6789999999995 21 23666655433 233
Q ss_pred CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHH
Q 000687 1186 AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQ 1261 (1350)
Q Consensus 1186 ~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~ 1261 (1350)
.+ ++.+.+|++.+|++.-... .-...||||||||||||||++-+|++++||||||+||-.-..+|.
T Consensus 397 ls~~eR~~rv~~aL~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv 466 (534)
T COG4172 397 LSAAERDQRVIEALEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVL 466 (534)
T ss_pred CCHHHHHHHHHHHHHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHH
Confidence 33 4457888999988765432 234679999999999999999999999999999999999999999
Q ss_pred HHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCCchhHHH
Q 000687 1262 EALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1262 ~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
+.|+++. .|-+-++|+|+|..++. ||+|+||.+|+|||+|+-++++.+ |...|.+-
T Consensus 467 ~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~-P~~~YT~~ 525 (534)
T COG4172 467 DLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFAN-PQHEYTRA 525 (534)
T ss_pred HHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcC-CCcHHHHH
Confidence 9999865 47899999999999976 999999999999999999999988 88888764
No 77
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.1e-72 Score=691.71 Aligned_cols=454 Identities=24% Similarity=0.400 Sum_probs=352.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
+|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 5899999999963 36999999999999999999999999999999999999999999999999987655443 4678
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC------CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
++||+|++.++.. |++||+.++... .+..+..+ .+.+.+..+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 999999986431 11121111 123344444 555555666789999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
|||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998874 47899999999999875 999999999999987654332100
Q ss_pred CcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhh
Q 000687 657 NGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKL 736 (1350)
Q Consensus 657 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1350)
.+.
T Consensus 232 -----~~~------------------------------------------------------------------------ 234 (501)
T PRK10762 232 -----SLI------------------------------------------------------------------------ 234 (501)
T ss_pred -----HHH------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 737 AFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLF 816 (1350)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 816 (1350)
..
T Consensus 235 ------------------------------------------------~~------------------------------ 236 (501)
T PRK10762 235 ------------------------------------------------EM------------------------------ 236 (501)
T ss_pred ------------------------------------------------HH------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000687 817 NTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTA 896 (1350)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~ 896 (1350)
++...
T Consensus 237 ---------------------------------~~~~~------------------------------------------ 241 (501)
T PRK10762 237 ---------------------------------MVGRK------------------------------------------ 241 (501)
T ss_pred ---------------------------------hcCCC------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000687 897 GFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLR 976 (1350)
Q Consensus 897 ~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~ 976 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 977 RCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVF 1056 (1350)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~ 1056 (1350)
.
T Consensus 242 ------------------------------------------------------------------------------~- 242 (501)
T PRK10762 242 ------------------------------------------------------------------------------L- 242 (501)
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred HHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC
Q 000687 1057 DLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE 1136 (1350)
Q Consensus 1057 ~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~ 1136 (1350)
...++... . . +..-.|+++||++ ++|+|+||+|++||++||+|+||||||||+++|.|+++
T Consensus 243 --~~~~~~~~----~---~--~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~ 303 (501)
T PRK10762 243 --EDQYPRLD----K---A--PGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP 303 (501)
T ss_pred --cccccccc----c---C--CCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC
Confidence 00000000 0 0 0011488999974 37999999999999999999999999999999999999
Q ss_pred CCccEEEECCccCCCCCh-HHhhcccEEEccCC---CCC-cccHHHHhccCCCC--------CCHHHHHHHHHHhcchHH
Q 000687 1137 PSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLF-ASTIYENIAYGHES--------ATESEIIEAARLANADKF 1203 (1350)
Q Consensus 1137 p~~G~I~idG~di~~i~l-~~lR~~i~~VpQdp---~LF-~gTIreNL~~~~~~--------~tdeei~~al~~a~l~~~ 1203 (1350)
|++|+|.+||.++...+. +.+|++++||||+| .+| ..|+++|+.++... .+.++.. ..+.++
T Consensus 304 p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 378 (501)
T PRK10762 304 RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQ-----QAVSDF 378 (501)
T ss_pred CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHH-----HHHHHH
Confidence 999999999999977664 34678899999997 344 46999999864210 1111111 112233
Q ss_pred HhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCch
Q 000687 1204 ISSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLS 1281 (1350)
Q Consensus 1204 I~~lp~Gld-t~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRls 1281 (1350)
+..+ |+. .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++
T Consensus 379 l~~~--~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~ 456 (501)
T PRK10762 379 IRLF--NIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP 456 (501)
T ss_pred HHhc--CCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3333 332 22344556799999999999999999999999999999999999999999999875 5899999999999
Q ss_pred HHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1282 TIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1282 ti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
.+.. ||+|++|++|++++.|+++++.
T Consensus 457 ~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 457 EVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred HHHhhCCEEEEEECCEEEEEeccccCC
Confidence 9865 9999999999999999887653
No 78
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.7e-72 Score=694.07 Aligned_cols=458 Identities=26% Similarity=0.466 Sum_probs=351.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCCcEEEEC---------------
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY--DPTSGQVLLD--------------- 490 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~i~--------------- 490 (1350)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 36999999999999999999999999999999999996 7999999997
Q ss_pred --------CeeCC-------CCC---HHHHhcceEEEccc-Ccccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHH
Q 000687 491 --------GHDIK-------SLK---LRWLRQQIGLVSQE-PALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSF 548 (1350)
Q Consensus 491 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~ 548 (1350)
|.++. ..+ ...+|+.++||+|+ +.+|. .|++||+.++.. ..+.++..+ .+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVG-----RAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHH
Confidence 33321 111 13457789999998 57776 499999987532 112222211 12333
Q ss_pred HhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCch
Q 000687 549 IIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLS 626 (1350)
Q Consensus 549 i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 626 (1350)
+..+ |++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 4444 66655667778999999999999999999999999999999999999999999999874 3899999999999
Q ss_pred hhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCC
Q 000687 627 TIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGR 705 (1350)
Q Consensus 627 ~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1350)
.+.. ||+|++|++|++++.|+++++... |.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~~-------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV-----FM-------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH-----HH--------------------------------------------
Confidence 9875 999999999999877655433210 00
Q ss_pred CCccccccCCcCCccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 706 SPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMS 785 (1350)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHH
Q 000687 786 VYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARL 865 (1350)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~ 865 (1350)
. .
T Consensus 262 ------------------------------------------------------------------~---~--------- 263 (520)
T TIGR03269 262 ------------------------------------------------------------------E---G--------- 263 (520)
T ss_pred ------------------------------------------------------------------h---h---------
Confidence 0 0
Q ss_pred HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000687 866 ALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAG 945 (1350)
Q Consensus 866 s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1350)
+ .
T Consensus 264 ------------------------------------~------------------------~------------------ 265 (520)
T TIGR03269 264 ------------------------------------V------------------------S------------------ 265 (520)
T ss_pred ------------------------------------c------------------------h------------------
Confidence 0 0
Q ss_pred HHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 000687 946 EAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVF 1025 (1350)
Q Consensus 946 e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~ 1025 (1350)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCC--CCCCCcccc
Q 000687 1026 MVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPS--RPDIPIFRD 1103 (1350)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~--~~~~~vL~~ 1103 (1350)
++ ..+.. . +. ...-|+++||+++|+. +...++|+|
T Consensus 266 ----------------------------~~----~~~~~-~---~~-------~~~~l~~~~l~~~~~~~~~~~~~il~~ 302 (520)
T TIGR03269 266 ----------------------------EV----EKECE-V---EV-------GEPIIKVRNVSKRYISVDRGVVKAVDN 302 (520)
T ss_pred ----------------------------hh----ccccc-c---CC-------CCceEEEeccEEEeccCCCCCceEEee
Confidence 00 00000 0 00 0114999999999963 112469999
Q ss_pred eeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEEC-Ccc---CCCCC---hHHhhcccEEEccCCCCCc-ccH
Q 000687 1104 LSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMID-GKD---IRKYN---LKSLRRHMAIVPQEPCLFA-STI 1175 (1350)
Q Consensus 1104 vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id-G~d---i~~i~---l~~lR~~i~~VpQdp~LF~-gTI 1175 (1350)
+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.+ +...+ ...+|++++||||++.+|. .|+
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 382 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTV 382 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcH
Confidence 999999999999999999999999999999999999999996 643 33332 2356778999999998886 499
Q ss_pred HHHhccCCC-CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCC
Q 000687 1176 YENIAYGHE-SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATS 1250 (1350)
Q Consensus 1176 reNL~~~~~-~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTS 1250 (1350)
+||+.++.. ... ++++.++++..++.+. ..+.........||||||||++|||||+.+|+||||||||+
T Consensus 383 ~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~ 456 (520)
T TIGR03269 383 LDNLTEAIGLELPDELARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTG 456 (520)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999975311 111 1234445555554320 00001233446799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1251 ALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1251 aLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+||+.+.+.+.+.|++.. .|+|||+|||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 457 ~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 518 (520)
T TIGR03269 457 TMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVEE 518 (520)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 999999999999998874 37899999999999865 999999999999999999988653
No 79
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.9e-69 Score=717.10 Aligned_cols=225 Identities=26% Similarity=0.412 Sum_probs=191.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|+++.|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 469999999999632 3469999999999999999999999999999999999999999999999999865 45667889
Q ss_pred eEEEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+|||||++.+|+. |++|||.++.. ..+.++.++ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 99999987532 112222211 123344444 6666677788899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcH
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGV 659 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~ 659 (1350)
.+|+|||||||||+||+.+++.+.+.|+++.+|+|+|++||+++.+.. ||||++|++|++++.|++++|.++...|+
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy 1155 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGF 1155 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcE
Confidence 999999999999999999999999999998789999999999999976 99999999999999999999987643343
No 80
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-71 Score=687.95 Aligned_cols=456 Identities=24% Similarity=0.409 Sum_probs=350.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 5899999999963 359999999999999999999999999999999999999999999999999875543 456789
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC-----CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|+||+|++.+|.. |++||+.++... .+..+..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 11122111 223444444 5544456667899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCC
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGEN 657 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~ 657 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999998874 48999999999999866 99999999999986442100000
Q ss_pred cHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhhh
Q 000687 658 GVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLA 737 (1350)
Q Consensus 658 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1350)
. +.
T Consensus 230 --------------------------------------------------------------------------~-~~-- 232 (501)
T PRK11288 230 --------------------------------------------------------------------------R-DQ-- 232 (501)
T ss_pred --------------------------------------------------------------------------H-HH--
Confidence 0 00
Q ss_pred hhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 738 FKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFN 817 (1350)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 817 (1350)
+
T Consensus 233 ----------~--------------------------------------------------------------------- 233 (501)
T PRK11288 233 ----------L--------------------------------------------------------------------- 233 (501)
T ss_pred ----------H---------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000687 818 TLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG 897 (1350)
Q Consensus 818 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~ 897 (1350)
.+.+ .... .
T Consensus 234 ----------------------~~~~-------~~~~---~--------------------------------------- 242 (501)
T PRK11288 234 ----------------------VQAM-------VGRE---I--------------------------------------- 242 (501)
T ss_pred ----------------------HHHh-------cCCC---c---------------------------------------
Confidence 0000 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000687 898 FVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRR 977 (1350)
Q Consensus 898 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~ 977 (1350)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 978 CFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFD 1057 (1350)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~ 1057 (1350)
..
T Consensus 243 ---------------------------------------------------------------------------~~--- 244 (501)
T PRK11288 243 ---------------------------------------------------------------------------GD--- 244 (501)
T ss_pred ---------------------------------------------------------------------------cc---
Confidence 00
Q ss_pred HhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC
Q 000687 1058 LLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP 1137 (1350)
Q Consensus 1058 ~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1137 (1350)
.... .+. + .....++++|+++. .+++|+||+|++||++||+|+||||||||+++|.|+++|
T Consensus 245 ~~~~----~~~-----~---~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p 305 (501)
T PRK11288 245 IYGY----RPR-----P---LGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRR 305 (501)
T ss_pred cccc----ccc-----C---CCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcC
Confidence 0000 000 0 00114889999732 389999999999999999999999999999999999999
Q ss_pred CccEEEECCccCCCCC-hHHhhcccEEEccCCC---CC-cccHHHHhccCCCCC--------CHHHHHHHHHHhcchHHH
Q 000687 1138 SSGRVMIDGKDIRKYN-LKSLRRHMAIVPQEPC---LF-ASTIYENIAYGHESA--------TESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1138 ~~G~I~idG~di~~i~-l~~lR~~i~~VpQdp~---LF-~gTIreNL~~~~~~~--------tdeei~~al~~a~l~~~I 1204 (1350)
++|+|.+||.++...+ .+.+|++++|+||+|. +| ..|+.||+.++.... ...+.. ..+.+++
T Consensus 306 ~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l 380 (501)
T PRK11288 306 TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-----ENADRFI 380 (501)
T ss_pred CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH-----HHHHHHH
Confidence 9999999999987543 3456789999999973 55 479999998642110 111110 1122233
Q ss_pred hcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchH
Q 000687 1205 SSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST 1282 (1350)
Q Consensus 1205 ~~lp~Gld-t~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst 1282 (1350)
..+ |++ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|.|||+|||+++.
T Consensus 381 ~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~ 458 (501)
T PRK11288 381 RSL--NIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPE 458 (501)
T ss_pred Hhc--CcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHH
Confidence 332 231 12233445799999999999999999999999999999999999999999998865 48999999999999
Q ss_pred Hhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1283 IRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1283 i~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+.. ||+|++|++|++++.|++++..
T Consensus 459 ~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 459 VLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHhhCCEEEEEECCEEEEEEccccCC
Confidence 854 9999999999999999988765
No 81
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.7e-71 Score=684.87 Aligned_cols=459 Identities=23% Similarity=0.373 Sum_probs=349.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCeeCCCCCHHH-Hhc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP--TSGQVLLDGHDIKSLKLRW-LRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~i~g~~~~~~~~~~-~r~ 504 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .|+
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 3699999999999999999999999999999999999987 7999999999998776544 467
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCCC------CCHHHHHHHHHHHchHHHHhcCCCCccccc-cCCCCCCChhHHHHHH
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQV-GERGVQLSGGQKQRIA 576 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v-~~~g~~LSgGqkqri~ 576 (1350)
+++||+|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988865 999999886421 11122111 123344444 443322 3346789999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998874 48999999999999876 999999999999866532110000
Q ss_pred cCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhh
Q 000687 655 GENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHE 734 (1350)
Q Consensus 655 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1350)
.+
T Consensus 232 -------~~----------------------------------------------------------------------- 233 (500)
T TIGR02633 232 -------DI----------------------------------------------------------------------- 233 (500)
T ss_pred -------HH-----------------------------------------------------------------------
Confidence 00
Q ss_pred hhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHH
Q 000687 735 KLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAEL 814 (1350)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 814 (1350)
. .
T Consensus 234 ---------------------------------------------~------------~--------------------- 235 (500)
T TIGR02633 234 ---------------------------------------------I------------T--------------------- 235 (500)
T ss_pred ---------------------------------------------H------------H---------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000687 815 LFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVAC 894 (1350)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~ 894 (1350)
. ++..+
T Consensus 236 ---------------------------~-------~~~~~---------------------------------------- 241 (500)
T TIGR02633 236 ---------------------------M-------MVGRE---------------------------------------- 241 (500)
T ss_pred ---------------------------H-------HhCcc----------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHH
Q 000687 895 TAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTP 974 (1350)
Q Consensus 895 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~ 974 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 975 LRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRS 1054 (1350)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~r 1054 (1350)
.
T Consensus 242 -----------------------------------------~-------------------------------------- 242 (500)
T TIGR02633 242 -----------------------------------------I-------------------------------------- 242 (500)
T ss_pred -----------------------------------------c--------------------------------------
Confidence 0
Q ss_pred HHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc
Q 000687 1055 VFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF 1134 (1350)
Q Consensus 1055 v~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl 1134 (1350)
... .+. .+ . +. ..--|+++|++++|+...+.++|+|+||+|++||++||+|+||||||||+++|+|+
T Consensus 243 -~~~--~~~--~~-~----~~---~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~ 309 (500)
T TIGR02633 243 -TSL--YPH--EP-H----EI---GDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGA 309 (500)
T ss_pred -ccc--ccc--cc-c----CC---CCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCC
Confidence 000 000 00 0 00 01148999999999532224699999999999999999999999999999999999
Q ss_pred CCC-CccEEEECCccCCCCCh-HHhhcccEEEccCC---CCCc-ccHHHHhccCCCC-------CCHHHHHHHHHHhcch
Q 000687 1135 YEP-SSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLFA-STIYENIAYGHES-------ATESEIIEAARLANAD 1201 (1350)
Q Consensus 1135 ~~p-~~G~I~idG~di~~i~l-~~lR~~i~~VpQdp---~LF~-gTIreNL~~~~~~-------~tdeei~~al~~a~l~ 1201 (1350)
++| ++|+|.++|.++...+. ..+|++++||||++ .+|. .|+++|+.++... ...++. ...+.
T Consensus 310 ~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 384 (500)
T TIGR02633 310 YPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE-----LQIIG 384 (500)
T ss_pred CCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH-----HHHHH
Confidence 995 89999999999865443 56788999999996 3555 5999999875210 111111 11122
Q ss_pred HHHhcCCCCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccC
Q 000687 1202 KFISSLPDGYKT-FVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHR 1279 (1350)
Q Consensus 1202 ~~I~~lp~Gldt-~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHR 1279 (1350)
++++.+ |+.. ........||||||||++|||||+.+|++|||||||++||+.+.+.+++.|++.. +|.|||+|||+
T Consensus 385 ~~l~~~--~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd 462 (500)
T TIGR02633 385 SAIQRL--KVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSE 462 (500)
T ss_pred HHHHhc--CccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 333332 2221 1233445799999999999999999999999999999999999999999998864 58999999999
Q ss_pred chHHhh-cCEEEEEeCCEEeeecChhH
Q 000687 1280 LSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1280 lsti~~-~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
++.+.. ||+|++|++|+++..++.++
T Consensus 463 ~~~~~~~~d~v~~l~~G~i~~~~~~~~ 489 (500)
T TIGR02633 463 LAEVLGLSDRVLVIGEGKLKGDFVNHA 489 (500)
T ss_pred HHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 999865 99999999999998775543
No 82
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-69 Score=612.73 Aligned_cols=494 Identities=26% Similarity=0.373 Sum_probs=447.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHH
Q 000687 804 YLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVI 883 (1350)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~ 883 (1350)
.+.+++.++..++..+++.++.+++.++...++..+|...++++..- +..|+=. ..-+|.++++++++..-...
T Consensus 67 vlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~-----~~~g~~~-Q~LrDL~qvR~Fltg~g~~A 140 (580)
T COG4618 67 VLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR-----RGSGDGL-QPLRDLDQVRQFLTGTGLTA 140 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-----cCCCccc-cchhhHHHHHHHHcCCCcch
Confidence 34445566678889999999999999999999999999998776652 2223222 22379999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHH
Q 000687 884 VQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMI 963 (1350)
Q Consensus 884 ~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 963 (1350)
+.+..++-+++.++|.++||++++.++...+++.+.++.....++..++..+.....+.+...+..|.++|+|.|+....
T Consensus 141 ~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l 220 (580)
T COG4618 141 FFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNL 220 (580)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHH
Confidence 99999999999999999999999999998888888888888777777777777788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 964 VGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAP 1043 (1350)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1350)
.++|.+....+........-..+...+++..+..+....++..|+||+..|++|.|.+++.-+.+.....|+-..+..+.
T Consensus 221 ~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wk 300 (580)
T COG4618 221 AKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWK 300 (580)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHH
Confidence 99999999988888888888888888999999999999999999999999999999999888888888899999999999
Q ss_pred HHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCC
Q 000687 1044 DFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCG 1123 (1350)
Q Consensus 1044 ~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsG 1123 (1350)
++..++.+.+|+.+++...++..+. -+. +..+|.+.++++++.=|+. .+|+|+|+||++.|||.+|||||||||
T Consensus 301 q~~~Ar~s~~Rl~~lL~~~p~~~~~----m~L-P~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSG 374 (580)
T COG4618 301 QFVAARQSYKRLNELLAELPAAAER----MPL-PAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSG 374 (580)
T ss_pred HHHHHHHHHHHHHHHHHhCccccCC----CCC-CCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCcc
Confidence 9999999999999999876654321 122 2457899999999976654 568999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHH
Q 000687 1124 KSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKF 1203 (1350)
Q Consensus 1124 KSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~ 1203 (1350)
||||.++|.|.+.|.+|.|.+||-|+++++.+.+-++|||.|||..||+|||+|||.-+.++.+++.|.+|++.|+.||.
T Consensus 375 KSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHel 454 (580)
T COG4618 375 KSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHEL 454 (580)
T ss_pred HHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988788999999999999999999
Q ss_pred HhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchH
Q 000687 1204 ISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST 1282 (1350)
Q Consensus 1204 I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst 1282 (1350)
|.++|+||||.||++|..|||||||||+|||||+.+|.+++||||-|+||.+-|+.+.++|.... +|+|+|+||||++.
T Consensus 455 Il~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~ 534 (580)
T COG4618 455 ILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSA 534 (580)
T ss_pred HHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998865 69999999999999
Q ss_pred HhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1283 IRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1283 i~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+..+|+|+||++|++..+|+-+|.+++
T Consensus 535 L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 535 LASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999876
No 83
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-70 Score=680.05 Aligned_cols=466 Identities=23% Similarity=0.403 Sum_probs=356.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHh-cc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLR-QQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r-~~ 505 (1350)
.|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 6999999999963 3599999999999999999999999999999999999999999999999999877766554 57
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
+|||+|++.++.. |++||+.++.... .+..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASMQ-----KMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHHH-----HHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988865 9999999875321 11111 112333333 555555667789999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHH
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 662 (1350)
|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++... .....
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~---~~~~~ 235 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD---DIIQA 235 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH---HHHHH
Confidence 99999999999999999999999998874 48999999999999865 999999999999999887765321 00000
Q ss_pred HHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhhhhhhhh
Q 000687 663 LIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQA 742 (1350)
Q Consensus 663 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1350)
+ . . ...
T Consensus 236 ~-----------~---~----~~~-------------------------------------------------------- 241 (510)
T PRK15439 236 I-----------T---P----AAR-------------------------------------------------------- 241 (510)
T ss_pred H-----------h---C----ccc--------------------------------------------------------
Confidence 0 0 0 000
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (510)
T PRK15439 242 -------------------------------------------------------------------------------- 241 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 902 (1350)
.....+.
T Consensus 242 -----------------------------~~~~~~~-------------------------------------------- 248 (510)
T PRK15439 242 -----------------------------EKSLSAS-------------------------------------------- 248 (510)
T ss_pred -----------------------------ccccccc--------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000687 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~ 1062 (1350)
.+. . ...+
T Consensus 249 ----------------------------------------------------------------------~~~-~-~~~~ 256 (510)
T PRK15439 249 ----------------------------------------------------------------------QKL-W-LELP 256 (510)
T ss_pred ----------------------------------------------------------------------ccc-c-cccc
Confidence 000 0 0000
Q ss_pred cCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000687 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1142 (1350)
.. .+..+ ...--|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|
T Consensus 257 ~~-~~~~~-------~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i 320 (510)
T PRK15439 257 GN-RRQQA-------AGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRI 320 (510)
T ss_pred cc-ccccC-------CCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEE
Confidence 00 00000 0011489999983 16999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCChHH-hhcccEEEccCC---CCCc-ccHHHHhccCC----CC-CCHHHHHHHHHHhcchHHHhcCCCCcc
Q 000687 1143 MIDGKDIRKYNLKS-LRRHMAIVPQEP---CLFA-STIYENIAYGH----ES-ATESEIIEAARLANADKFISSLPDGYK 1212 (1350)
Q Consensus 1143 ~idG~di~~i~l~~-lR~~i~~VpQdp---~LF~-gTIreNL~~~~----~~-~tdeei~~al~~a~l~~~I~~lp~Gld 1212 (1350)
.++|.++...+... +|.+|+||||++ .+|. .|+.+|+.... .. ....+.. ..+.+++..+ |++
T Consensus 321 ~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~ 393 (510)
T PRK15439 321 MLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLERYRRAL--NIK 393 (510)
T ss_pred EECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHHHHHHc--CCC
Confidence 99999998776654 467899999996 3665 49999985320 10 0111111 1122333333 332
Q ss_pred -ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEE
Q 000687 1213 -TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVI 1289 (1350)
Q Consensus 1213 -t~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI 1289 (1350)
.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|
T Consensus 394 ~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i 473 (510)
T PRK15439 394 FNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRV 473 (510)
T ss_pred CCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEE
Confidence 23344456799999999999999999999999999999999999999999999864 48999999999999965 9999
Q ss_pred EEEeCCEEeeecChhHHhhc
Q 000687 1290 AVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1290 ~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++|++|+++..|+++++...
T Consensus 474 ~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 474 LVMHQGEISGALTGAAINVD 493 (510)
T ss_pred EEEECCEEEEEEccccCCHH
Confidence 99999999999999887644
No 84
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.6e-69 Score=610.68 Aligned_cols=535 Identities=25% Similarity=0.311 Sum_probs=458.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 103 LMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKM 182 (1350)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 182 (1350)
++.+++ ++.+..++....|.++-++-|.+....+ .+ .+....++.+++.++..++.+++.....+++.++...+
T Consensus 25 ~~~v~l-fS~~INiL~L~~~lyMLQVyDRVL~S~s-~~----TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L 98 (580)
T COG4618 25 FIGVGL-FSAVINLLALTGPLYMLQVYDRVLPSRS-VP----TLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQL 98 (580)
T ss_pred HHHHHH-HHHHHHHHHHhhhHHHHHHHhhhccCCC-cc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333443 4444455555666677788887654221 11 22223333344445567788899999999999999999
Q ss_pred HHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000687 183 RIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISE-KLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLI 261 (1350)
Q Consensus 183 R~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~ 261 (1350)
...+|....+.+..-- ..|+=..-+ +|.++++.+++. .+..++...|+. +.+.++|.+++++.++.++...++
T Consensus 99 ~~~v~~a~~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P-~yl~v~fl~Hp~lG~~a~~ga~iL 172 (580)
T COG4618 99 NGPVFAASFSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMP-LYLAVIFLFHPWLGLIALAGAIIL 172 (580)
T ss_pred ccHHHHHHHhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776532 344333333 699999999976 444555555654 467788889999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 262 AVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFV 341 (1350)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1350)
+.+.++-.+..++-.++..+.....+..+.-+..|.++|++.|+.....++|.+.+..+.....+.+-..+.+.+++..+
T Consensus 173 v~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~ 252 (580)
T COG4618 173 VVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRAL 252 (580)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 88888888888888888888999999999999999999999999999999999999999988888887888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccC
Q 000687 342 VFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLEL 421 (1350)
Q Consensus 342 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~ 421 (1350)
=++....++..|+|++.+|++|.|.+++....+.....|+-.....+.++..++.|.+|+.+++...|+.+ ...+.
T Consensus 253 Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~----~~m~L 328 (580)
T COG4618 253 RMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAA----ERMPL 328 (580)
T ss_pred HHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc----CCCCC
Confidence 88889999999999999999999999987655556666899999999999999999999999998866532 22445
Q ss_pred CCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH
Q 000687 422 DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 422 ~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~ 501 (1350)
+..+|.+.++++++.-|+. ++++|+|+||++++||.+|||||||||||||.++|.|.++|++|.|++||-|++.++.+.
T Consensus 329 P~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~ 407 (580)
T COG4618 329 PAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQ 407 (580)
T ss_pred CCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHH
Confidence 6678999999999977654 578999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 502 LRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
+-++|||.|||..||+|||.|||+-..++.+.+.+.+|++.++.||.|.+||+||||.+|+.|..|||||||||+|||||
T Consensus 408 lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAl 487 (580)
T COG4618 408 LGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARAL 487 (580)
T ss_pred hccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHH
Confidence 99999999999999999999999877778899999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|.||.+++||||-|+||.+-|..+.++|...+ +|.|+|+||||++.+..+|+|+||++|++...|+-+|.+++
T Consensus 488 YG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 488 YGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999999998886 59999999999999999999999999999999999998875
No 85
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-70 Score=676.21 Aligned_cols=453 Identities=24% Similarity=0.361 Sum_probs=347.6
Q ss_pred EEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhcceEE
Q 000687 430 LKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQIGL 508 (1350)
Q Consensus 430 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~i~~ 508 (1350)
++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 369999999999999999999999999999999999999999999999999876554 346778999
Q ss_pred EcccCcccc-ccHHHHhhcCCCC-----CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 509 VSQEPALFA-TTIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 509 v~Q~~~lf~-~ti~~Ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
|+|++.++. .|++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 4999999886421 11122111 223444444 6665666778899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 660 (1350)
.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998874 58999999999999865 999999999999987764432100
Q ss_pred HHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhhhhhh
Q 000687 661 AKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKE 740 (1350)
Q Consensus 661 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1350)
...+
T Consensus 225 -~~~~--------------------------------------------------------------------------- 228 (491)
T PRK10982 225 -KIIA--------------------------------------------------------------------------- 228 (491)
T ss_pred -HHHH---------------------------------------------------------------------------
Confidence 0000
Q ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 741 QASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQ 820 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 820 (1350)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000687 821 HSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVL 900 (1350)
Q Consensus 821 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~ 900 (1350)
. ++...
T Consensus 229 ---------------------~-------~~~~~---------------------------------------------- 234 (491)
T PRK10982 229 ---------------------M-------MVGRS---------------------------------------------- 234 (491)
T ss_pred ---------------------H-------HhCCC----------------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000687 901 QWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFW 980 (1350)
Q Consensus 901 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 980 (1350)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000687 981 KGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLD 1060 (1350)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~ 1060 (1350)
... .
T Consensus 235 -----------------------------------------------------------------------~~~-----~ 238 (491)
T PRK10982 235 -----------------------------------------------------------------------LTQ-----R 238 (491)
T ss_pred -----------------------------------------------------------------------ccc-----c
Confidence 000 0
Q ss_pred cccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCcc
Q 000687 1061 RKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSG 1140 (1350)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G 1140 (1350)
.+.+ + .. .....|+++|++++| .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|
T Consensus 239 ~~~~--~-~~-------~~~~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G 303 (491)
T PRK10982 239 FPDK--E-NK-------PGEVILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAG 303 (491)
T ss_pred cccc--c-CC-------CCCcEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCcc
Confidence 0000 0 00 001148999999975 1489999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCChH-HhhcccEEEccCCC---CCc-ccHHHH-----hccCCC--C-CCHHHHHHHHHHhcchHHHhcC
Q 000687 1141 RVMIDGKDIRKYNLK-SLRRHMAIVPQEPC---LFA-STIYEN-----IAYGHE--S-ATESEIIEAARLANADKFISSL 1207 (1350)
Q Consensus 1141 ~I~idG~di~~i~l~-~lR~~i~~VpQdp~---LF~-gTIreN-----L~~~~~--~-~tdeei~~al~~a~l~~~I~~l 1207 (1350)
+|.+||.++...+.. .+|+.++|+||++. +|. .|+.+| +..... . .+.++..+ .+.+++..+
T Consensus 304 ~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~ 378 (491)
T PRK10982 304 TITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----DTQWVIDSM 378 (491)
T ss_pred EEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----HHHHHHHhc
Confidence 999999999876654 45778999999963 555 467666 432111 1 11111111 122333333
Q ss_pred CCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh
Q 000687 1208 PDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN 1285 (1350)
Q Consensus 1208 p~Gld-t~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~ 1285 (1350)
|+. -.......+||||||||++||||++.+|+||||||||++||+.+...+.+.|+++. +|+|||+|||+++.+..
T Consensus 379 --~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~ 456 (491)
T PRK10982 379 --RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLG 456 (491)
T ss_pred --CccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHh
Confidence 221 12344556799999999999999999999999999999999999999999998764 58999999999999864
Q ss_pred -cCEEEEEeCCEEeeecChhHH
Q 000687 1286 -AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1286 -~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|||+++|++|+++..++.+++
T Consensus 457 ~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 457 ITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred hCCEEEEEECCEEEEEEccccC
Confidence 999999999999988866433
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.2e-69 Score=668.33 Aligned_cols=453 Identities=23% Similarity=0.319 Sum_probs=346.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 5899999999963 3599999999999999999999999999999999999999999999999888777767777889
Q ss_pred EEEcccCcc--c-------cccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 507 GLVSQEPAL--F-------ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 507 ~~v~Q~~~l--f-------~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
+|++|++.+ + ..|+++|+.++.. ..+++.++ +..+ |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---------l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK--DPARCEQL---------AQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh--HHHHHHHH---------HHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 3589998865311 11222222 3333 55545566778999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+.+|++|||||||++||+++.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 225 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ- 225 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc-
Confidence 999999999999999999999999999999998875 47899999999999876 999999999999998887665422
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhh
Q 000687 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
.....+... .
T Consensus 226 --~~~~~~~~~-----------------~--------------------------------------------------- 235 (490)
T PRK10938 226 --ALVAQLAHS-----------------E--------------------------------------------------- 235 (490)
T ss_pred --hhhhhhhhh-----------------h---------------------------------------------------
Confidence 000000000 0
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000687 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000687 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~ 895 (1350)
.+ ... .
T Consensus 236 -------------------------------~~--~~~-~---------------------------------------- 241 (490)
T PRK10938 236 -------------------------------QL--EGV-Q---------------------------------------- 241 (490)
T ss_pred -------------------------------cc--Ccc-c----------------------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000687 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv 1055 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000687 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~ 1135 (1350)
.+...++....... ....-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.
T Consensus 242 -----~~~~~~~~~~~~~~---~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~ 310 (490)
T PRK10938 242 -----LPEPDEPSARHALP---ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDH 310 (490)
T ss_pred -----cCcccccccccccC---CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCC
Confidence 00000000000000 01124999999999963 35999999999999999999999999999999999988
Q ss_pred CC-CccEEEECCccCCC-CChHHhhcccEEEccCCCCCc---ccHHHHhccCCC-------CCC---HHHHHHHHHHhcc
Q 000687 1136 EP-SSGRVMIDGKDIRK-YNLKSLRRHMAIVPQEPCLFA---STIYENIAYGHE-------SAT---ESEIIEAARLANA 1200 (1350)
Q Consensus 1136 ~p-~~G~I~idG~di~~-i~l~~lR~~i~~VpQdp~LF~---gTIreNL~~~~~-------~~t---deei~~al~~a~l 1200 (1350)
+| ++|+|.++|.++.. .+...+|++++|+||++.++. .|+++++.++.. ... ++++.++++..++
T Consensus 311 ~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 390 (490)
T PRK10938 311 PQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGI 390 (490)
T ss_pred CcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCC
Confidence 75 69999999987632 233456889999999987642 467777653210 011 1234455555554
Q ss_pred hHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CC-ceEEEEcc
Q 000687 1201 DKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SG-KTTIVVAH 1278 (1350)
Q Consensus 1201 ~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g-~TvI~IaH 1278 (1350)
.+. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. ++ .|||+|||
T Consensus 391 ~~~----------~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsH 460 (490)
T PRK10938 391 DKR----------TADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSH 460 (490)
T ss_pred chh----------hccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 330 2223346799999999999999999999999999999999999999999999875 34 47999999
Q ss_pred CchHHhh--cCEEEEEeCCEEeeec
Q 000687 1279 RLSTIRN--AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1279 Rlsti~~--~DrI~Vl~~G~IvE~G 1301 (1350)
+++.+.. ||++++|++|+|++.-
T Consensus 461 d~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 461 HAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred chhhhhhhhheeEEEecCCceEEee
Confidence 9999964 7999999999998753
No 87
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.2e-67 Score=706.54 Aligned_cols=212 Identities=22% Similarity=0.395 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCChHHh
Q 000687 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~l~~l 1157 (1350)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|++||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3469999999999999999999999999999999999997 78899999999985 257
Q ss_pred hcccEEEccCCC-CCcccHHHHhccCC----C-CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1158 RRHMAIVPQEPC-LFASTIYENIAYGH----E-SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1158 R~~i~~VpQdp~-LF~gTIreNL~~~~----~-~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|++++||||++. ++..|+||||.++. + +.++++ +.++++..++. +-.|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 899999999875 55679999998642 1 234433 44555555553 3478899988889999999
Q ss_pred HHHHHHHHhccCCC-EEEEecCCCCCCHHHHHHHHHHHHHh-cCCceEEEEccCchHH--hhcCEEEEEeCC-EEeeecC
Q 000687 1228 QRVAIARAFVRKAE-IMLLDEATSALDAESERSVQEALDRA-CSGKTTIVVAHRLSTI--RNAHVIAVIDDG-KVAELGS 1302 (1350)
Q Consensus 1228 QrlaLARALlr~p~-ILlLDEaTSaLD~~te~~I~~~L~~~-~~g~TvI~IaHRlsti--~~~DrI~Vl~~G-~IvE~Gt 1302 (1350)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999987 4689999999999974 569999999997 9999998
Q ss_pred hh
Q 000687 1303 HS 1304 (1350)
Q Consensus 1303 ~~ 1304 (1350)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 88
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.2e-66 Score=649.03 Aligned_cols=526 Identities=17% Similarity=0.196 Sum_probs=399.7
Q ss_pred HHHhhChhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 92 LFRFADSLDYVLMAIGSLGAFVHGCSFPI-FLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISC 170 (1350)
Q Consensus 92 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (1350)
+++|++++++. ++++++++++..++... .+++.+.++|.... +.. .+. .++++.++.+++.++..++
T Consensus 4 ~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~---~~~----~~~----~~~~~~~~~~~~~~~~~~~ 71 (547)
T PRK10522 4 LRLVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT---SLL----VLP----EFLGLLLLLMAVTLGSQLA 71 (547)
T ss_pred HHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cch----HHH----HHHHHHHHHHHHHHHHHHH
Confidence 34455555443 34455555555544443 34455667775321 110 111 1111222234566778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000687 171 WMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQL 250 (1350)
Q Consensus 171 ~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l 250 (1350)
..+++.++..++|.++|++++++|++||+++ ++|++++|+++|++.+...+. .+..++..++.+++.++++++++|++
T Consensus 72 ~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l 149 (547)
T PRK10522 72 LTTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKM 149 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8899999999999999999999999999988 999999999999999998765 46778888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHH
Q 000687 251 ALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGE---SKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 251 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e---~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+.
T Consensus 150 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (547)
T PRK10522 150 LLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRA 228 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHH
Confidence 999999999998888888898888888889999999999999999999996 5544 456778888877777665555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000687 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
.........+..++..+...+++++++.+ +..+.+.+..+.+++.....|+..+...+..++.++.+.+|+.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~ 305 (547)
T PRK10522 229 DTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALA 305 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 44444333332222222223333333322 112333333333333344568999999999999999999999999765
Q ss_pred CCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000687 408 KPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
+++.+. + ..... +..+.|+++||+|+|++ +.++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 306 ~~~~~~-~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i 380 (547)
T PRK10522 306 PYKAEF-P-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEI 380 (547)
T ss_pred cccccc-c-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE
Confidence 432211 1 11111 11357999999999974 2469999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
.+||+|+++++.+++|++|+||+|||++|++|++|| + ++.++++++++++..++.+++. .|+|. .+|.+|
T Consensus 381 ~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~L 450 (547)
T PRK10522 381 LLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKL 450 (547)
T ss_pred EECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCC
Confidence 999999999999999999999999999999999999 2 3456666766666665554443 23221 137899
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
|||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. .++|+|+||||+++++.||+|++|++|+++|.
T Consensus 451 SgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 451 SKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987653 48999999999999999999999999999987
Q ss_pred -cChHH
Q 000687 646 -GTHDE 650 (1350)
Q Consensus 646 -g~~~~ 650 (1350)
|++.+
T Consensus 531 ~~~~~~ 536 (547)
T PRK10522 531 TGEERD 536 (547)
T ss_pred cCCchh
Confidence 44433
No 89
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-67 Score=658.16 Aligned_cols=483 Identities=21% Similarity=0.354 Sum_probs=345.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. .+|
T Consensus 1 ml~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i 66 (530)
T PRK15064 1 MLSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERL 66 (530)
T ss_pred CEEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 3789999999963 36999999999999999999999999999999999999999999999973 369
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC----------------CHH---HHHHH----------HHHHchHHHHhcCCCCc
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA----------------DLN---EIEEA----------ARVANAYSFIIKLPDGF 556 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~l~~g~ 556 (1350)
||++|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.+..+ |+
T Consensus 67 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl 144 (530)
T PRK15064 67 GKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GI 144 (530)
T ss_pred EEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CC
Confidence 999999988765 9999998753100 000 00000 0012233445555 55
Q ss_pred cccc-cCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE
Q 000687 557 DTQV-GERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVV 634 (1350)
Q Consensus 557 ~t~v-~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i 634 (1350)
+... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .++|||+|||+++.+.. ||+|
T Consensus 145 ~~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i 222 (530)
T PRK15064 145 PEEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHM 222 (530)
T ss_pred ChhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceE
Confidence 4333 345678999999999999999999999999999999999999999999875 48999999999999876 9999
Q ss_pred EEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCcccccc
Q 000687 635 AVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLS 713 (1350)
Q Consensus 635 ~vl~~G~i~-~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1350)
++|++|+++ ..|++++.+... ...+....+....
T Consensus 223 ~~l~~g~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~-------------------------------------------- 257 (530)
T PRK15064 223 ADLDYGELRVYPGNYDEYMTAA-TQARERLLADNAK-------------------------------------------- 257 (530)
T ss_pred EEEeCCEEEEecCCHHHHHHHH-HHHHHHHHHHHHH--------------------------------------------
Confidence 999999994 788888765420 0000000000000
Q ss_pred CCcCCccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchh
Q 000687 714 DFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHA 793 (1350)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1350)
...+ .+.
T Consensus 258 -----------------~~~~----------~~~---------------------------------------------- 264 (530)
T PRK15064 258 -----------------KKAQ----------IAE---------------------------------------------- 264 (530)
T ss_pred -----------------HHHH----------HHH----------------------------------------------
Confidence 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHH
Q 000687 794 YMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVR 873 (1350)
Q Consensus 794 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~ 873 (1350)
+++ ... +. . ...
T Consensus 265 -----------------------------------------~~~-~~~---~~-----~---~~~--------------- 276 (530)
T PRK15064 265 -----------------------------------------LQS-FVS---RF-----S---ANA--------------- 276 (530)
T ss_pred -----------------------------------------HHH-HHH---Hh-----h---ccc---------------
Confidence 000 000 00 0 000
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHH
Q 000687 874 SAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRT 953 (1350)
Q Consensus 874 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~t 953 (1350)
..
T Consensus 277 ---------------------------------------------------------~~--------------------- 278 (530)
T PRK15064 277 ---------------------------------------------------------SK--------------------- 278 (530)
T ss_pred ---------------------------------------------------------hh---------------------
Confidence 00
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Q 000687 954 VAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSAN 1033 (1350)
Q Consensus 954 Ira~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~ 1033 (1350)
+ ....
T Consensus 279 --~---------------~~~~---------------------------------------------------------- 283 (530)
T PRK15064 279 --A---------------KQAT---------------------------------------------------------- 283 (530)
T ss_pred --h---------------HHHH----------------------------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hccccCCCCCCCCC-CCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeC
Q 000687 1034 GAAETLTLAPDFIKGGRAMRSVFDL--LDRKTEIEPDDPDA-TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARA 1110 (1350)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~a~~rv~~~--l~~~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~ 1110 (1350)
...+++.+. ...++......... ...+...+..|+++||+++|+. .++|+|+||+|++
T Consensus 284 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~ 344 (530)
T PRK15064 284 ----------------SRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEA 344 (530)
T ss_pred ----------------HHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECC
Confidence 000000000 00000000000000 0000001235999999999964 3699999999999
Q ss_pred CCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCC--CC-cccHHHHhccCC-CCC
Q 000687 1111 GKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPC--LF-ASTIYENIAYGH-ESA 1186 (1350)
Q Consensus 1111 Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~--LF-~gTIreNL~~~~-~~~ 1186 (1350)
||++||+||||||||||+++|+|+++|++|+|.++| +++++|+||++. ++ ..|+++|+.... ...
T Consensus 345 Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~ 413 (530)
T PRK15064 345 GERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGD 413 (530)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCc
Confidence 999999999999999999999999999999999998 357999999984 44 359999997532 222
Q ss_pred CHHHHHHHHHHhcch-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHH
Q 000687 1187 TESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALD 1265 (1350)
Q Consensus 1187 tdeei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~ 1265 (1350)
.++++.++++..++. +.. .....+||||||||++||||++.+|+||||||||++||+.+...+.+.|+
T Consensus 414 ~~~~~~~~l~~~~l~~~~~-----------~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 482 (530)
T PRK15064 414 DEQAVRGTLGRLLFSQDDI-----------KKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALE 482 (530)
T ss_pred cHHHHHHHHHHcCCChhHh-----------cCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 345667777777663 222 23346799999999999999999999999999999999999999999998
Q ss_pred HhcCCceEEEEccCchHHhh-cCEEEEEeCCEEe-eecChhHHhhc
Q 000687 1266 RACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLLKN 1309 (1350)
Q Consensus 1266 ~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~Iv-E~Gt~~eLl~~ 1309 (1350)
+. +.|||+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 483 ~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 483 KY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 86 4599999999999865 9999999999998 78999998765
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.8e-66 Score=646.08 Aligned_cols=483 Identities=23% Similarity=0.341 Sum_probs=338.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-----------~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-----------IKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 6999999999962 246999999999999999999999999999999999999999999999752 469
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC----------------CH----------HHHHHHHHH-------HchHHHHhcC
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA----------------DL----------NEIEEAARV-------ANAYSFIIKL 552 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~----------------~~----------~~~~~~~~~-------~~~~~~i~~l 552 (1350)
|||+|+|.+++. |++||+.++.... .. .++.+.++. ..+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999865 9999998753100 00 011111111 1122333333
Q ss_pred CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-c
Q 000687 553 PDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-A 631 (1350)
Q Consensus 553 ~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 631 (1350)
|++ .......+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 443 2456677899999999999999999999999999999999999999999998863 599999999999976 9
Q ss_pred CEEEEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccc
Q 000687 632 DVVAVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR 710 (1350)
Q Consensus 632 D~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1350)
|+|++|++|+++ ..|++++..+.. ..+........
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~---------~~~~~~~~~~~----------------------------------- 263 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQK---------AKRLAQEEKQE----------------------------------- 263 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHH---------HHHHHHHHHHH-----------------------------------
Confidence 999999999986 678777665320 00000000000
Q ss_pred cccCCcCCccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000687 711 RLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP 790 (1350)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1350)
++ ..
T Consensus 264 -----------------------~~---------~~-------------------------------------------- 267 (556)
T PRK11819 264 -----------------------AA---------RQ-------------------------------------------- 267 (556)
T ss_pred -----------------------HH---------HH--------------------------------------------
Confidence 00 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHH
Q 000687 791 DHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDAN 870 (1350)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~ 870 (1350)
. .+++ +. .|.++ .+.
T Consensus 268 --~----------------------------------------~~~~-~~--------~~~~~--~~~------------ 282 (556)
T PRK11819 268 --K----------------------------------------ALKR-EL--------EWVRQ--SPK------------ 282 (556)
T ss_pred --H----------------------------------------HHHH-HH--------HHHHH--hhh------------
Confidence 0 0000 00 00000 000
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcc
Q 000687 871 NVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGN 950 (1350)
Q Consensus 871 ~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 950 (1350)
.+
T Consensus 283 -----------------------------------------------------------~~------------------- 284 (556)
T PRK11819 283 -----------------------------------------------------------AR------------------- 284 (556)
T ss_pred -----------------------------------------------------------hh-------------------
Confidence 00
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 000687 951 VRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV 1030 (1350)
Q Consensus 951 i~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~ 1030 (1350)
++ ..+ ..
T Consensus 285 ----~~-~~~------------~~-------------------------------------------------------- 291 (556)
T PRK11819 285 ----QA-KSK------------AR-------------------------------------------------------- 291 (556)
T ss_pred ----HH-HHH------------HH--------------------------------------------------------
Confidence 00 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCC-CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEe
Q 000687 1031 SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP-DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRAR 1109 (1350)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~~-~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~ 1109 (1350)
....++..+ ..+.+.+. ........+...+.-|+++||+++|++ .++|+|+||+|+
T Consensus 292 ------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~ 348 (556)
T PRK11819 292 ------------------LARYEELLS--EEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLP 348 (556)
T ss_pred ------------------HHHHHHhhc--ccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEc
Confidence 000000000 00000000 000000000011235999999999964 369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCC-CCCc-ccHHHHhccCCCC--
Q 000687 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEP-CLFA-STIYENIAYGHES-- 1185 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp-~LF~-gTIreNL~~~~~~-- 1185 (1350)
+||++||+|+||||||||+++|.|+++|++|+|.+++ ++ +|+|+||++ .++. .|+++|+.++...
T Consensus 349 ~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 417 (556)
T PRK11819 349 PGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIK 417 (556)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhccccc
Confidence 9999999999999999999999999999999999954 21 699999997 5654 5999999865321
Q ss_pred --CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000687 1186 --ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1186 --~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
..+.+..++++..++.+. ........||||||||++||||++.+|++|||||||++||+.+...+.+.
T Consensus 418 ~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 487 (556)
T PRK11819 418 VGNREIPSRAYVGRFNFKGG----------DQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEA 487 (556)
T ss_pred ccccHHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 112233344444443210 12233457999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEccCchHHhh-cCEEEEEeC-CEEee-ecChhHHhhc
Q 000687 1264 LDRACSGKTTIVVAHRLSTIRN-AHVIAVIDD-GKVAE-LGSHSHLLKN 1309 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~-G~IvE-~Gt~~eLl~~ 1309 (1350)
|++. .+ |+|+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 488 l~~~-~~-tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 488 LLEF-PG-CAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHhC-CC-eEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 9986 34 99999999998865 999999996 88874 6888777654
No 91
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.2e-64 Score=633.39 Aligned_cols=471 Identities=19% Similarity=0.248 Sum_probs=373.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000687 814 LLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVA 893 (1350)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~ 893 (1350)
.++.+++.++..+++.++..++|.++|+++++.|++||++ +++|++++|+++|++.+...+. .+..++..++.++++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~ 138 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGS 138 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 4566788888999999999999999999999999999985 7899999999999999998765 467778888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhH---HHHHHHHHHH
Q 000687 894 CTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSE---LMIVGLFSSN 970 (1350)
Q Consensus 894 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e---~~~~~~~~~~ 970 (1350)
++++++++|++++++++++|+.++..+...+..++..++.++..++..+++.|.++|+++++ ++.+ +.+.++|.+.
T Consensus 139 ~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~ 217 (547)
T PRK10522 139 AAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPD 217 (547)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHH
Confidence 99999999999999999998887776666666666667777888889999999999999995 4443 4566777777
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 971 LQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGR 1050 (1350)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1350)
.+...+...+..........+......+..++.++++..+ +..+.+....+.........++..+......+..+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~ 294 (547)
T PRK10522 218 AQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQV 294 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666554444433333322222222222223333333322 1122222222223333345688888888899999999
Q ss_pred HHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHH
Q 000687 1051 AMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIAL 1130 (1350)
Q Consensus 1051 a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~l 1130 (1350)
+.+|+.++++.+++.+.. ...+. +..+.|+|+||+|+||++ .++|+|+||+|+|||++||||+||||||||+++
T Consensus 295 a~~ri~~l~~~~~~~~~~--~~~~~--~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~l 368 (547)
T PRK10522 295 AFNKLNKLALAPYKAEFP--RPQAF--PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAML 368 (547)
T ss_pred HHHHHHHHhccccccccc--ccccc--CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 999999987554322111 11111 123579999999999743 469999999999999999999999999999999
Q ss_pred HhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCC
Q 000687 1131 VQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDG 1210 (1350)
Q Consensus 1131 L~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~G 1210 (1350)
|+|+|+|++|+|++||+|+++++.+++|++++||||||.+|++|+++| + ++.++++++++++.+++++++.. |+|
T Consensus 369 l~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~ 443 (547)
T PRK10522 369 LTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDG 443 (547)
T ss_pred HhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-ccc
Confidence 999999999999999999999999999999999999999999999999 2 45788889999988888776653 444
Q ss_pred ccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCE
Q 000687 1211 YKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHV 1288 (1350)
Q Consensus 1211 ldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~Dr 1288 (1350)
. .+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+.. +++|+|+||||++++..||+
T Consensus 444 ~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~ 518 (547)
T PRK10522 444 R-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADR 518 (547)
T ss_pred C-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCE
Confidence 2 1478999999999999999999999999999999999999999999997654 48999999999999999999
Q ss_pred EEEEeCCEEeee-cChhHHh
Q 000687 1289 IAVIDDGKVAEL-GSHSHLL 1307 (1350)
Q Consensus 1289 I~Vl~~G~IvE~-Gt~~eLl 1307 (1350)
|++|++|+++|. |++.+-.
T Consensus 519 i~~l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 519 LLEMRNGQLSELTGEERDAA 538 (547)
T ss_pred EEEEECCEEEEecCCchhhh
Confidence 999999999987 5554433
No 92
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-65 Score=642.15 Aligned_cols=482 Identities=24% Similarity=0.351 Sum_probs=337.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 6899999999962 23699999999999999999999999999999999999999999999975 2479
Q ss_pred EEEcccCccccc-cHHHHhhcCCCC-----------------CCH---------HHHHHHHHHHch-------HHHHhcC
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPD-----------------ADL---------NEIEEAARVANA-------YSFIIKL 552 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~-----------------~~~---------~~~~~~~~~~~~-------~~~i~~l 552 (1350)
|||+|+|.++.. |++|||.++... ... .++.++++.++. .+.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998864 999999875311 000 122222222222 2233333
Q ss_pred CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-c
Q 000687 553 PDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-A 631 (1350)
Q Consensus 553 ~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 631 (1350)
|++ .......+||||||||++|||||+.+|++|||||||++||+++...+.+.|+++ ++|+|+|||+++.+.. |
T Consensus 151 --~l~-~~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCP-PWDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 442 235567799999999999999999999999999999999999999999999876 4699999999999976 9
Q ss_pred CEEEEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccc
Q 000687 632 DVVAVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR 710 (1350)
Q Consensus 632 D~i~vl~~G~i~-~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1350)
|+|++|++|+++ ..|++++..+.. ..+........
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~---------~~~~~~~~~~~----------------------------------- 261 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQK---------EKRLEQEEKEE----------------------------------- 261 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHH---------HHHHHHHHHHH-----------------------------------
Confidence 999999999976 678877765420 00000000000
Q ss_pred cccCCcCCccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000687 711 RLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP 790 (1350)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1350)
..
T Consensus 262 --------------------~~---------------------------------------------------------- 263 (552)
T TIGR03719 262 --------------------SA---------------------------------------------------------- 263 (552)
T ss_pred --------------------HH----------------------------------------------------------
Confidence 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHH
Q 000687 791 DHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDAN 870 (1350)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~ 870 (1350)
....+ .|..
T Consensus 264 --------------------------------------------~~~~~-----------------------~~~~---- 272 (552)
T TIGR03719 264 --------------------------------------------RQKAL-----------------------KREL---- 272 (552)
T ss_pred --------------------------------------------HHHHH-----------------------HHHH----
Confidence 00000 0000
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcc
Q 000687 871 NVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGN 950 (1350)
Q Consensus 871 ~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 950 (1350)
.| + + +.. ...
T Consensus 273 ------------------------------~~------------------~-----~---~~~---------~~~----- 282 (552)
T TIGR03719 273 ------------------------------EW------------------V-----R---SSP---------KAR----- 282 (552)
T ss_pred ------------------------------HH------------------H-----H---hhh---------hhH-----
Confidence 00 0 0 000 000
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Q 000687 951 VRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV 1030 (1350)
Q Consensus 951 i~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~ 1030 (1350)
++ ..+ ....
T Consensus 283 ----~~-~~~-~~~~----------------------------------------------------------------- 291 (552)
T TIGR03719 283 ----QA-KSK-ARLA----------------------------------------------------------------- 291 (552)
T ss_pred ----HH-HHH-HHHH-----------------------------------------------------------------
Confidence 00 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-CCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEe
Q 000687 1031 SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIE-PDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRAR 1109 (1350)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~~-~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~ 1109 (1350)
..++..+ ..++..+ .........+...+.-|+++||+++|+. .++|+|+||+|+
T Consensus 292 --------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~ 346 (552)
T TIGR03719 292 --------------------RYEELLS--QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLP 346 (552)
T ss_pred --------------------HHHhhhh--hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECC---eeeeccceEEEc
Confidence 0000000 0000000 0000000000011235999999999964 369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCC-CCCc-ccHHHHhccCCCC--
Q 000687 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEP-CLFA-STIYENIAYGHES-- 1185 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp-~LF~-gTIreNL~~~~~~-- 1185 (1350)
+||++||+|+||||||||+++|.|+.+|++|+|.+++ ++ +|+|+||++ .++. .|++||+.++...
T Consensus 347 ~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 415 (552)
T TIGR03719 347 PGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQ 415 (552)
T ss_pred CCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccc
Confidence 9999999999999999999999999999999999954 21 699999997 3554 5999999875321
Q ss_pred CC--HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000687 1186 AT--ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1186 ~t--deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
.. +.+..++++..++.+. ........||||||||++|||||+.+|++|||||||++||+.+...+.+.
T Consensus 416 ~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 485 (552)
T TIGR03719 416 LGKREVPSRAYVGRFNFKGS----------DQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEA 485 (552)
T ss_pred cCcchHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Confidence 11 2223334444433211 12334467999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEccCchHHhh-cCEEEEEeC-CEEee-ecChhHHhh
Q 000687 1264 LDRACSGKTTIVVAHRLSTIRN-AHVIAVIDD-GKVAE-LGSHSHLLK 1308 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~-G~IvE-~Gt~~eLl~ 1308 (1350)
|++.. .|||+|||+++.+.. ||+|++|++ |++++ .|+++++++
T Consensus 486 l~~~~--~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 486 LLEFA--GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred HHHCC--CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99863 399999999999865 999999997 68874 477766654
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.4e-64 Score=634.76 Aligned_cols=531 Identities=15% Similarity=0.109 Sum_probs=439.9
Q ss_pred hHHHHHHhhChhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 88 GLGELFRFADSLDY----VLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
.++++++|++|+++ ..+++.+++.++...+....|++.+.++|.+... +...+...+..++++++++.++..+.
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~--~~~~f~~~l~~~~l~~~~~~~~~~~~ 155 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR--SPRNFAWILFKWFLIAPPASFINSAI 155 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667888877654 2455666777777778888888999999976532 12223322333444444555566677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG 243 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 243 (1350)
.|+..++......++..++|..+|+++...++.+||+ ++|++++|+++|++.+.+.+...+..++..++.+++.++++
T Consensus 156 ~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L 233 (659)
T TIGR00954 156 KYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKL 233 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788888888899999999999999999999999985 68999999999999999999999999999999999888877
Q ss_pred HH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000687 244 FS-AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQR 322 (1350)
Q Consensus 244 ~~-~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~ 322 (1350)
+. ++|.+++++++.+|+.+++.+++.+++.+...+.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+
T Consensus 234 ~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~ 313 (659)
T TIGR00954 234 LTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVE 313 (659)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----cccCHHHHHH-HHHH---HHHHHHHHHHHHHHHHHH
Q 000687 323 LGYKSGFAKGMGLGATYFVVFC--SYALLLWYGGYLVR-H----HFTNGGLAIA-TMFA---VMIGGLALAQAAPSISAF 391 (1350)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----g~~~~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~ 391 (1350)
...+.....+...++..++... ..+++++.|...+. + |.+|.|.+++ ++.+ +.....|+..+...+..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 314 HLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888888888877777766542 33333344443332 2 6889888776 3333 334467899999999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCC-------CC--CC-------------ccCCCCcceEEEEEEEEECCCCCCCccccce
Q 000687 392 AKAKVAAAKIFRIIDHKPSIDRN-------SE--SG-------------LELDSVSGLIELKHVDFSYPSRPEVRILNNF 449 (1350)
Q Consensus 392 ~~~~~s~~ri~~~l~~~~~~~~~-------~~--~~-------------~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i 449 (1350)
+++.++.+|++++++.+++++.. +. +. .......+.|+++||+|+|+++ .++|+|+
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~i 471 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESL 471 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecc
Confidence 99999999999999764332100 00 00 0011234679999999999742 3699999
Q ss_pred EEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCC-
Q 000687 450 SLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGR- 528 (1350)
Q Consensus 450 ~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~- 528 (1350)
||++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++.
T Consensus 472 sl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~ 540 (659)
T TIGR00954 472 SFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDS 540 (659)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCC
Confidence 999999999999999999999999999999999999999875 56899999999999999999999874
Q ss_pred ------CCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHH
Q 000687 529 ------PDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESE 602 (1350)
Q Consensus 529 ------~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~ 602 (1350)
+..++++++++++.+++++++.. |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||++++
T Consensus 541 ~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~ 618 (659)
T TIGR00954 541 SEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVE 618 (659)
T ss_pred hhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHH
Confidence 33567788999999999999887 999999876 5779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 000687 603 KLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQ 639 (1350)
Q Consensus 603 ~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~ 639 (1350)
+.+.+.+++. |+|+|+||||+++++.||+|++|++
T Consensus 619 ~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 619 GYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 9999999774 8999999999999999999999973
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-64 Score=634.31 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=165.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 36999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--CCCc-ccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1162 AIVPQEP--CLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp--~LF~-gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
+|+||++ .++. .|+.+++....+...++++.+.++..++... .+......||||||||++||||++.
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGD----------KVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChh----------HhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 4788887422222334455666666555311 1222345799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEe-eecChhHHh
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLL 1307 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~Iv-E~Gt~~eLl 1307 (1350)
+|++|||||||++||+.+...+.+.|++. .| |||+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-EG-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-CC-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 99999999999999999999999999986 44 99999999999865 9999999999998 678888764
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-62 Score=657.91 Aligned_cols=213 Identities=23% Similarity=0.366 Sum_probs=177.7
Q ss_pred cEEEEEEEEECCCC----------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC--CccEEEECCccC
Q 000687 1082 EVELKHVDFSYPSR----------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP--SSGRVMIDGKDI 1149 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p--~~G~I~idG~di 1149 (1350)
.+.|+||++.++.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999998532 123699999999999999999999999999999999999773 689999999886
Q ss_pred CCCChHHhhcccEEEccCCCCCc-ccHHHHhccCC----C-CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCC
Q 000687 1150 RKYNLKSLRRHMAIVPQEPCLFA-STIYENIAYGH----E-SATESE----IIEAARLANADKFISSLPDGYKTFVGERG 1219 (1350)
Q Consensus 1150 ~~i~l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~----~-~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G 1219 (1350)
.+ ..+|+.+|||+|++.++. .|++|||.+.. + +.++++ +.+.++..++.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 43 456788999999987765 59999998641 1 233333 4556666666543 466676544
Q ss_pred -CCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchH--HhhcCEEEEEeC-
Q 000687 1220 -VQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST--IRNAHVIAVIDD- 1294 (1350)
Q Consensus 1220 -~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst--i~~~DrI~Vl~~- 1294 (1350)
..||||||||++|||||+.+|+||+||||||+||+.+...|.+.|++.. +|+|||+++|+++. ...||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999875 58999999999984 367999999996
Q ss_pred CEEeeecChh
Q 000687 1295 GKVAELGSHS 1304 (1350)
Q Consensus 1295 G~IvE~Gt~~ 1304 (1350)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999863
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.5e-62 Score=621.66 Aligned_cols=200 Identities=26% Similarity=0.450 Sum_probs=163.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999964 36999999999999999999999999999999999999999999999 5432 59
Q ss_pred EEEccCC-CCCc-ccHHHHhccCCCCC--C--HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1162 AIVPQEP-CLFA-STIYENIAYGHESA--T--ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1162 ~~VpQdp-~LF~-gTIreNL~~~~~~~--t--deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
+|++|++ .++. .|+.+|+.++.+.. . +.++.+.++..++.. +..+. ....||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~----~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMT----PVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhC----hhhhCCHHHHHHHHHHHH
Confidence 9999986 4654 49999998753321 1 233444444444321 11222 335699999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEe-CCEEeee-cChhHHh
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID-DGKVAEL-GSHSHLL 1307 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~-~G~IvE~-Gt~~eLl 1307 (1350)
|+.+|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|+|+++ |++++-+
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 99999999999999999999999999999875 4599999999999864 99999998 8999875 6666554
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7.4e-63 Score=621.98 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=165.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 59999999999632 3599999999999999999999999999999999999999999999975 3579
Q ss_pred EEEccCCCCCcccHHHHhcc----CCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1162 AIVPQEPCLFASTIYENIAY----GHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~----~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
+|+||++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 22345555321 12234577788888887775321 11234679999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEe-eecChhHHh
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLL 1307 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~Iv-E~Gt~~eLl 1307 (1350)
.+|++|||||||++||+.+...+.+.|++. ++ |+|+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-QG-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-CC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 44 99999999999975 9999999999998 568877653
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.7e-63 Score=576.73 Aligned_cols=452 Identities=28% Similarity=0.449 Sum_probs=353.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH-HHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR-WLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~-~~r~~ 505 (1350)
.++++|++++|++ .++|+|+||++.+||++||+|.||||||||+|+|.|.|+|++|+|.+||+++...++. .....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 5899999999974 4699999999999999999999999999999999999999999999999999877665 56678
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCC------HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDAD------LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
|+.|+||..|++. ||.|||.+|+.... ..++.+.++ +.+..+ |.+........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~-----~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRAR-----ELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHH-----HHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999965 99999999976432 233333332 334433 322114444557999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh-HHHHhcc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH-DELIAKG 655 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~-~~l~~~~ 655 (1350)
||+..+++|||||||||+|+....+.+.+.+++++ +|.++|+|||||+.+.. ||||.||.||+.+..++. .++-..
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~~- 236 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSED- 236 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCHH-
Confidence 99999999999999999999999999999999986 69999999999999976 999999999999865431 110000
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhh
Q 000687 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
+
T Consensus 237 ------------------------------------------------------------------------------~- 237 (500)
T COG1129 237 ------------------------------------------------------------------------------E- 237 (500)
T ss_pred ------------------------------------------------------------------------------H-
Confidence 0
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000687 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
++...
T Consensus 238 -----------------------------------------------lv~~M---------------------------- 242 (500)
T COG1129 238 -----------------------------------------------LVRLM---------------------------- 242 (500)
T ss_pred -----------------------------------------------HHHHh----------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000687 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~ 895 (1350)
+|+
T Consensus 243 ------------------------------------------vGr----------------------------------- 245 (500)
T COG1129 243 ------------------------------------------VGR----------------------------------- 245 (500)
T ss_pred ------------------------------------------hCc-----------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000687 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv 1055 (1350)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000687 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~ 1135 (1350)
++-+..++ .+ ... ...-.++++|++.. ..++|+||++++||++||.|--|||+|-++++|+|..
T Consensus 246 -~~~~~~~~-~~--~~~-----~~~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~ 309 (500)
T COG1129 246 -ELEDLFPE-PP--EEG-----IGEPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGAR 309 (500)
T ss_pred -chhhhccc-cc--ccC-----CCCcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCC
Confidence 00000000 00 000 00113677777542 2589999999999999999999999999999999998
Q ss_pred CCCccEEEECCccCCCCCh-HHhhcccEEEccCC----CCCcccHHHHhccCC-CCCCHH-HHHHHHHHhcchHHHhcCC
Q 000687 1136 EPSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP----CLFASTIYENIAYGH-ESATES-EIIEAARLANADKFISSLP 1208 (1350)
Q Consensus 1136 ~p~~G~I~idG~di~~i~l-~~lR~~i~~VpQdp----~LF~gTIreNL~~~~-~~~tde-ei~~al~~a~l~~~I~~lp 1208 (1350)
++.+|+|.+||.++.--++ +..+..|+|||-|- .+...||++|+.+.. ...... -+....+.....+++.+|.
T Consensus 310 ~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~ 389 (500)
T COG1129 310 PASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLR 389 (500)
T ss_pred cCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcC
Confidence 8999999999998876654 47888999999775 344679999998762 111111 2445556666777777763
Q ss_pred ---CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh
Q 000687 1209 ---DGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1209 ---~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~ 1284 (1350)
.+.+.++ .+||||.+|+++|||+|..+|+||||||||.++|..+...|.+.|+++. +|++||+||-.+.++.
T Consensus 390 Ik~~s~~~~v----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll 465 (500)
T COG1129 390 IKTPSPEQPI----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELL 465 (500)
T ss_pred cccCCccchh----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 1233334 4799999999999999999999999999999999999999999999875 6999999999999986
Q ss_pred -hcCEEEEEeCCEEeee
Q 000687 1285 -NAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1285 -~~DrI~Vl~~G~IvE~ 1300 (1350)
.||||+||.+|+|+..
T Consensus 466 ~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 466 GLSDRILVMREGRIVGE 482 (500)
T ss_pred hhCCEEEEEECCEEEEE
Confidence 6999999999999863
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=9.4e-61 Score=605.22 Aligned_cols=532 Identities=16% Similarity=0.146 Sum_probs=437.2
Q ss_pred HHHHHHHHhcchhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 743 SSFWRLAKMNSPEWV-----YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFN 817 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 817 (1350)
..+++++++.+|+|. .+++.+++.++...+....+++.+.+++.....+..........|.++++++.++..+..
T Consensus 77 ~~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~ 156 (659)
T TIGR00954 77 GKLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIK 156 (659)
T ss_pred HHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666777777665 566666777777778888888888888876644332222223344555556666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000687 818 TLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG 897 (1350)
Q Consensus 818 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~ 897 (1350)
++..++......++...+|++.|++....++.|||. ++|++.+|+++|++.+.+.+...+..++..++.++++++.+
T Consensus 157 ~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L 233 (659)
T TIGR00954 157 YLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKL 233 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888888889999999999999988899999984 67999999999999999999999999999999998888877
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000687 898 FV-LQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLR 976 (1350)
Q Consensus 898 ~~-~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~ 976 (1350)
+. .+|.+++++++.+|+.++...+..+.+.+...+.++..+.....+.|.++|+++||+|+.++.+.++|.+..++..+
T Consensus 234 ~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~ 313 (659)
T TIGR00954 234 LTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVE 313 (659)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999888888888888888999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHH-Hc----CCCcHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 000687 977 RCFWKGQIAGSGYGVAQFCLYA--SYALGLWYSSWLV-KH----GISDFSKTIRVFMV----LMVSANGAAETLTLAPDF 1045 (1350)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv-~~----g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 1045 (1350)
...+...+.+....+..++... ...+.++.|...+ .. |.++.+.++..+.. +.....++..+.....++
T Consensus 314 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 314 HLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777777776543 2223333344333 22 67888877664333 334567788888889999
Q ss_pred HHHHHHHHHHHHHhccccCCCC------CCCC---C------------CCCCCCCCCcEEEEEEEEECCCCCCCCcccce
Q 000687 1046 IKGGRAMRSVFDLLDRKTEIEP------DDPD---A------------TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDL 1104 (1350)
Q Consensus 1046 ~~~~~a~~rv~~~l~~~~~~~~------~~~~---~------------~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~v 1104 (1350)
.++..+.+|+.++++.+++.+. .... . ........+.|+++||+|+||++ .++|+|+
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~i 471 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESL 471 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecc
Confidence 9999999999999876443210 0000 0 00001134679999999999743 3699999
Q ss_pred eEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCC-
Q 000687 1105 SLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGH- 1183 (1350)
Q Consensus 1105 sl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~- 1183 (1350)
||+|++||++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 472 sl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~ 540 (659)
T TIGR00954 472 SFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDS 540 (659)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCC
Confidence 999999999999999999999999999999999999999874 67899999999999999999999864
Q ss_pred ------CCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHH
Q 000687 1184 ------ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESE 1257 (1350)
Q Consensus 1184 ------~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te 1257 (1350)
++.++++++++++.+++++++.. |.||||..+ .+.+||||||||++||||++++|++||||||||+||++++
T Consensus 541 ~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~ 618 (659)
T TIGR00954 541 SEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVE 618 (659)
T ss_pred hhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHH
Confidence 34678899999999999999988 999999986 5679999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeC
Q 000687 1258 RSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDD 1294 (1350)
Q Consensus 1258 ~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~ 1294 (1350)
+.+++.+++. |+|+|+||||++++..||+|++|+.
T Consensus 619 ~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 619 GYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 9999999874 8999999999999999999999973
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.2e-62 Score=608.01 Aligned_cols=192 Identities=24% Similarity=0.335 Sum_probs=163.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4899999999953 25999999999999999999999999999999999999999999986 159
Q ss_pred EEEccCCCC-CcccHHHHhccCCCCCC-HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1162 AIVPQEPCL-FASTIYENIAYGHESAT-ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1162 ~~VpQdp~L-F~gTIreNL~~~~~~~t-deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
+|+||++.+ ++.|+++|+.++..... +..+.++++..++.+... .....||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999875 56799999987532222 334556666666654432 33457999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecC
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt 1302 (1350)
|+||||||||++||+.+...+.+.|++..+ |+|+|+|||++..+.. ||||++|++ ++...|+
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 999999999999999999999999998743 7899999999999865 999999964 8877776
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.8e-60 Score=569.29 Aligned_cols=487 Identities=28% Similarity=0.402 Sum_probs=346.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +++|+|+||++.+|+++||||+||||||||+++|.|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 5899999999963 46999999999999999999999999999999999999999999998762 269
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCC--HHHHHHHHH-------------------------HHchHHHHhcCCCCccc
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDAD--LNEIEEAAR-------------------------VANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~--~~~~~~~~~-------------------------~~~~~~~i~~l~~g~~t 558 (1350)
+|++|++.+.+. ||++.+..+..... ..+++.+.. .+.+...+..| |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 99999988754211 011111100 02223333344 4443
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEE
Q 000687 559 QVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVL 637 (1350)
Q Consensus 559 ~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl 637 (1350)
. .....+||||||-|++|||||+.+|+||||||||++||.++..++.+.|.+. +| |+|+||||..++.+ |++|+-+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 4455789999999999999999999999999999999999999999999865 45 99999999999987 9999999
Q ss_pred eCCEEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcC
Q 000687 638 QQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFST 717 (1350)
Q Consensus 638 ~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1350)
+.|++... .|.|..+++.............
T Consensus 224 d~g~l~~y-----------~Gny~~~~~~r~~~~~~~~~~~--------------------------------------- 253 (530)
T COG0488 224 DRGKLTPY-----------KGNYSSYLEQKAERLRQEAAAY--------------------------------------- 253 (530)
T ss_pred cCCceeEe-----------cCCHHHHHHHHHHHHHHHHHHH---------------------------------------
Confidence 99987643 2334444332222111000000
Q ss_pred CccccccccCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHH
Q 000687 718 SDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIR 797 (1350)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1350)
.+.. ....+.
T Consensus 254 -------------~~~~--------~~~~~~------------------------------------------------- 263 (530)
T COG0488 254 -------------EKQQ--------KELAKE------------------------------------------------- 263 (530)
T ss_pred -------------HHHH--------HHHHHH-------------------------------------------------
Confidence 0000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHH
Q 000687 798 EIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIG 877 (1350)
Q Consensus 798 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~ 877 (1350)
T Consensus 264 -------------------------------------------------------------------------------- 263 (530)
T COG0488 264 -------------------------------------------------------------------------------- 263 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHh
Q 000687 878 DRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAF 957 (1350)
Q Consensus 878 ~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~ 957 (1350)
T Consensus 264 -------------------------------------------------------------------------------- 263 (530)
T COG0488 264 -------------------------------------------------------------------------------- 263 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Q 000687 958 NSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAE 1037 (1350)
Q Consensus 958 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1350)
..|.+++........+.
T Consensus 264 ---~~~i~r~~~~~~~~k~a------------------------------------------------------------ 280 (530)
T COG0488 264 ---QEWIRRGKAAASKAKKA------------------------------------------------------------ 280 (530)
T ss_pred ---HHHHHHHHhccchHHHH------------------------------------------------------------
Confidence 00000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HhccccCCCCCCCCCCCCCC--CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCE
Q 000687 1038 TLTLAPDFIKGGRAMRSVFD--LLDRKTEIEPDDPDATPVPD--RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKT 1113 (1350)
Q Consensus 1038 ~~~~~~~~~~~~~a~~rv~~--~l~~~~~~~~~~~~~~~~~~--~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~ 1113 (1350)
.......+++.+ ....+...........+++. ..+--++++|++++|+.. .++++++||.|.+|++
T Consensus 281 --------~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~r 350 (530)
T COG0488 281 --------KSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDR 350 (530)
T ss_pred --------HHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCE
Confidence 000000011110 00011100000000001111 122359999999999643 4799999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCC-CCC-cccHHHHhccCCCCCCHHHH
Q 000687 1114 LALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEP-CLF-ASTIYENIAYGHESATESEI 1191 (1350)
Q Consensus 1114 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp-~LF-~gTIreNL~~~~~~~tdeei 1191 (1350)
||||||||+|||||+++|.|-..|.+|+|.+.-. -++||.+|+- .++ +.|+-|++.-..++..+.++
T Consensus 351 iaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~ 419 (530)
T COG0488 351 IAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEV 419 (530)
T ss_pred EEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHH
Confidence 9999999999999999999999999999998631 3689999998 444 34899999877665567888
Q ss_pred HHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCc
Q 000687 1192 IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGK 1271 (1350)
Q Consensus 1192 ~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~ 1271 (1350)
...|...+...- ...++| ..||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.+.. |
T Consensus 420 r~~L~~f~F~~~------~~~~~v----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f~-G- 487 (530)
T COG0488 420 RAYLGRFGFTGE------DQEKPV----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDFE-G- 487 (530)
T ss_pred HHHHHHcCCChH------HHhCch----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhCC-C-
Confidence 888887776532 223334 4699999999999999999999999999999999999999999998754 4
Q ss_pred eEEEEccCchHHhh-cCEEEEEeCCEEeee-cChhHHhhc
Q 000687 1272 TTIVVAHRLSTIRN-AHVIAVIDDGKVAEL-GSHSHLLKN 1309 (1350)
Q Consensus 1272 TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~-Gt~~eLl~~ 1309 (1350)
|||+|||+...+.. |++|+++++ ++.++ |++++..+.
T Consensus 488 tvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 488 TVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred eEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 99999999999976 999999999 88887 888877654
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=6e-60 Score=537.84 Aligned_cols=462 Identities=26% Similarity=0.449 Sum_probs=358.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~ 505 (1350)
.+++++++++|| ...+++||||++++||+.||.|+||+|||||+++|.|+|+|++|+|++||++++--++ +.+|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 3469999999999999999999999999999999999999999999999999986554 578889
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|+|++.|++. ||.|||.+|.+......+........+.+...++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999976 9999999998642110111111111223333333 666566667778999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHH
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 662 (1350)
|+|||||||||-|-|...+.+++.++++. .|+|||+|||++.+++. |||+-||.+|+++..-++ . +
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~--~-------- 226 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V--A-------- 226 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C--C--------
Confidence 99999999999999999999999999986 59999999999999987 999999999998643210 0 0
Q ss_pred HHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcCCccccccccCCCchhhhhhhhhhhh
Q 000687 663 LIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQA 742 (1350)
Q Consensus 663 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1350)
+ ...+.
T Consensus 227 ---------------------~----------------------------------------------~t~~e------- 232 (501)
T COG3845 227 ---------------------E----------------------------------------------TTEEE------- 232 (501)
T ss_pred ---------------------C----------------------------------------------CCHHH-------
Confidence 0 00000
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
+.. +
T Consensus 233 -----la~--------------------------------l--------------------------------------- 236 (501)
T COG3845 233 -----LAE--------------------------------L--------------------------------------- 236 (501)
T ss_pred -----HHH--------------------------------H---------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~ 902 (1350)
| .|
T Consensus 237 ----------------M------------------vG------------------------------------------- 239 (501)
T COG3845 237 ----------------M------------------VG------------------------------------------- 239 (501)
T ss_pred ----------------h------------------cC-------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000687 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~ 1062 (1350)
..+ ..+
T Consensus 240 -------------------------------~~v-------------------------------------------~~~ 245 (501)
T COG3845 240 -------------------------------REV-------------------------------------------VLR 245 (501)
T ss_pred -------------------------------Ccc-------------------------------------------ccc
Confidence 000 000
Q ss_pred cCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000687 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1142 (1350)
.+..+ . .+..--++++|++..=+ + +.+.+++|||+|++||++||.|-.|-|-+.|+.+|.|+..|.+|+|
T Consensus 246 ~~~~~------~--~pg~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I 315 (501)
T COG3845 246 VVKPP------S--TPGEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRI 315 (501)
T ss_pred cccCC------C--CCCCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceE
Confidence 00000 0 00112488999987643 2 2468999999999999999999999999999999999999999999
Q ss_pred EECCccC-CCCChHHhhc-ccEEEccCCC----CCcccHHHHhccCCCC---------CCHHHHHHHHHHhcchHHHhcC
Q 000687 1143 MIDGKDI-RKYNLKSLRR-HMAIVPQEPC----LFASTIYENIAYGHES---------ATESEIIEAARLANADKFISSL 1207 (1350)
Q Consensus 1143 ~idG~di-~~i~l~~lR~-~i~~VpQdp~----LF~gTIreNL~~~~~~---------~tdeei~~al~~a~l~~~I~~l 1207 (1350)
+++|.|+ ...+...+|+ .++|||.|.+ ....|+.||+.++..+ ....++.+.+ .+.++++
T Consensus 316 ~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-----~~li~~f 390 (501)
T COG3845 316 LLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-----RELIEEF 390 (501)
T ss_pred EECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH-----HHHHHHc
Confidence 9999997 6667777664 5999999984 5677999999876432 1223333322 2334332
Q ss_pred ---CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHH
Q 000687 1208 ---PDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTI 1283 (1350)
Q Consensus 1208 ---p~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti 1283 (1350)
+.+.++++ .+||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+|+.+
T Consensus 391 dVr~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEi 466 (501)
T COG3845 391 DVRAPSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEI 466 (501)
T ss_pred CccCCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHH
Confidence 23444444 5799999999999999999999999999999999999999999998765 699999999999998
Q ss_pred hh-cCEEEEEeCCEEeeecChhH
Q 000687 1284 RN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1284 ~~-~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
.. ||||+||.+|+|+....+++
T Consensus 467 l~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 467 LELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred HHhhheeeeeeCCceeccccccc
Confidence 55 99999999999998777665
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2e-53 Score=480.81 Aligned_cols=239 Identities=25% Similarity=0.438 Sum_probs=225.8
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
|.|+|+||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|+|||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999743 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred cEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
|+||||+|.+|++|+++|+++..+ .++++++++++.+++++++.++|++|++.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986543 6789999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHH
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~ 1320 (1350)
+||||||||++||+.+++.+++.|++.++++|+|+||||++++..||||+||++|+|++.|+|++|+++ .+.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988889999999999999999999999999999999999999986 689999998
Q ss_pred hhhh
Q 000687 1321 LQRF 1324 (1350)
Q Consensus 1321 ~q~~ 1324 (1350)
....
T Consensus 236 ~~~~ 239 (275)
T cd03289 236 PSDR 239 (275)
T ss_pred hcch
Confidence 6543
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-51 Score=422.21 Aligned_cols=227 Identities=33% Similarity=0.541 Sum_probs=196.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC-CCCHHHHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK-SLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~-~~~~~~~r~~ 505 (1350)
+|+++||+++|++ ..||+|||++|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 5899999999973 46999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred eEEEcccCccccc-cHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
+|+|+|+..||+- |+.||+.++.- ..+.++.++ . +.+.+.+. |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999976 99999998742 122222222 1 13344444 777777788899999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcH
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGV 659 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~ 659 (1350)
.-+|+++|+|||||||||+....+.+.++++. .|.|.|+|||.+.+.+. ||||+.|++|+|+|+|+++++..++.+..
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~R 231 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSER 231 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCHH
Confidence 99999999999999999999999999999986 59999999999999988 99999999999999999999998764444
Q ss_pred HHHH
Q 000687 660 YAKL 663 (1350)
Q Consensus 660 ~~~l 663 (1350)
.+++
T Consensus 232 ~~~F 235 (240)
T COG1126 232 TRQF 235 (240)
T ss_pred HHHH
Confidence 4443
No 105
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-50 Score=430.99 Aligned_cols=234 Identities=39% Similarity=0.595 Sum_probs=202.0
Q ss_pred eEEEEEEEEECCCC--CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---H
Q 000687 427 LIELKHVDFSYPSR--PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---W 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~ 501 (1350)
+|++++|++.|+.. +...+|+||||+|++||+.||||+||||||||++++.++-.|++|+|.+||+|+..++.. .
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 48999999999752 134699999999999999999999999999999999999999999999999999887654 5
Q ss_pred HhcceEEEcccCcccc-ccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 502 LRQQIGLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
+|++||++||++.|++ .||++||+|...-+...+-+...+...+.+++ |+....+..+.+|||||||||+||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----gL~dk~~~yP~qLSGGQKQRVaIARA 155 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----GLSDKADRYPAQLSGGQKQRVAIARA 155 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----CChhhhccCchhcCcchhhHHHHHHH
Confidence 6789999999999997 69999999976533322222233344444544 77777888899999999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCC
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGEN 657 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~ 657 (1350)
|..+|+|||.|||||||||+|.+.|.+.|+++. .|-|+++|||-++.++. |||+.||++|+++|+|+-.++..++.+
T Consensus 156 La~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk~ 235 (339)
T COG1135 156 LANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPKH 235 (339)
T ss_pred HhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcch
Confidence 999999999999999999999999999999874 48999999999999988 999999999999999999999988656
Q ss_pred cHHHHHHH
Q 000687 658 GVYAKLIR 665 (1350)
Q Consensus 658 ~~~~~l~~ 665 (1350)
..-++++.
T Consensus 236 ~~t~~fi~ 243 (339)
T COG1135 236 AITQEFIG 243 (339)
T ss_pred HHHHHHHH
Confidence 66666654
No 106
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.3e-48 Score=441.67 Aligned_cols=238 Identities=26% Similarity=0.432 Sum_probs=221.2
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++|+|++. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 468999999999642 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+||||+|.+|++|+++|+.+..+ .++++++++++.+++.+++..+|+++++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999974432 4678899999999999999999999999999999999999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~ 665 (1350)
+||||||||++||+.+++.+++.|++..+++|+|+||||++++..||||++|++|++++.|++++|++. .+.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988779999999999999988999999999999999999999986 577888876
Q ss_pred HHH
Q 000687 666 MQE 668 (1350)
Q Consensus 666 ~~~ 668 (1350)
...
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 544
No 107
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-49 Score=405.41 Aligned_cols=217 Identities=34% Similarity=0.563 Sum_probs=192.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC-CCChHHhhcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR-KYNLKSLRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~l~~lR~~ 1160 (1350)
-|+++||+.+|.. ..||+||||+|++||+|+|+||||||||||+++|.++-+|++|+|.+||.++. ..++..+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 3899999999963 46999999999999999999999999999999999999999999999998773 3388999999
Q ss_pred cEEEccCCCCCc-ccHHHHhccCCC---CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEPCLFA-STIYENIAYGHE---SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~---~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+|+|+|+..||+ -|+.||+.++.- ..+.+| -.+.++++++.+.....| .+|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999996 599999997631 223333 345567788877776665 6799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcC
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~ 1310 (1350)
||||.-+|+|+++|||||||||+.-.+|.+.++++. .|.|+|+|||.+...++ ||||+.||+|+|+|.|+|+++..+
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~- 226 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN- 226 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC-
Confidence 999999999999999999999999999999999876 58999999999999977 899999999999999999999987
Q ss_pred CCc
Q 000687 1311 PDG 1313 (1350)
Q Consensus 1311 ~~g 1313 (1350)
|..
T Consensus 227 p~~ 229 (240)
T COG1126 227 PKS 229 (240)
T ss_pred CCC
Confidence 443
No 108
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-49 Score=410.28 Aligned_cols=228 Identities=35% Similarity=0.568 Sum_probs=195.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+|+|||++|. +..+++|+||+|++||++.++|||||||||++++|.|+++|++|+|++||+++++++...||++|
T Consensus 1 MI~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 1 MIEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred CceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhh
Confidence 489999999997 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccc--cccCCCCCCChhHHHHHHHHHHh
Q 000687 507 GLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDT--QVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~v~~~g~~LSgGqkqri~iARal 581 (1350)
|||-|..-||+. ||.|||.+-.. ..+.+++.+- +.+.+..+ |++- ...+.+.+|||||+|||.+||||
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RAL 150 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARAL 150 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHH
Confidence 999999999965 99999987532 2233333221 22223222 5542 45667889999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhccCCc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAKGENG 658 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~~~~~~ 658 (1350)
..+|+|||+|||++||||.++..+|+.+.++.+ ++|+|+|||++++.- -||||.+|++|+|+..++|++++.++.+.
T Consensus 151 AadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~ 230 (309)
T COG1125 151 AADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPAND 230 (309)
T ss_pred hcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHH
Confidence 999999999999999999999999999988753 899999999999865 59999999999999999999999986544
Q ss_pred HHHHHH
Q 000687 659 VYAKLI 664 (1350)
Q Consensus 659 ~~~~l~ 664 (1350)
.-..++
T Consensus 231 FV~~f~ 236 (309)
T COG1125 231 FVEDFF 236 (309)
T ss_pred HHHHHh
Confidence 444443
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-48 Score=448.52 Aligned_cols=224 Identities=29% Similarity=0.494 Sum_probs=199.8
Q ss_pred CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCC--
Q 000687 1078 RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIR-- 1150 (1350)
Q Consensus 1078 ~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~-- 1150 (1350)
+..+.|+|+||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 456789999999999743 3469999999999999999999999999999999999997 57999999999997
Q ss_pred CCChHHhhcccEEEccCCCCCcccHHHHhccCCC--CCCHHHHH-----HHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1151 KYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATESEII-----EAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1151 ~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~tdeei~-----~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
.+++..+|++++||||+|.+|++|+++||.++.. ..++++.+ ++++.+++ ++++++.++++|.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccCC
Confidence 4566789999999999999999999999997532 24555543 44455554 4456788999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecC
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt 1302 (1350)
||||||+|||||++++|+|||||||||+||+++.+.+++.|++..+++|+|+|||+++++.. ||||+||++|+|+|.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998889999999999999988 99999999999999999
Q ss_pred hhHHhhc
Q 000687 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
|++++..
T Consensus 308 ~~~l~~~ 314 (329)
T PRK14257 308 TKTIFIH 314 (329)
T ss_pred HHHHhcC
Confidence 9999876
No 110
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-48 Score=418.77 Aligned_cols=218 Identities=34% Similarity=0.590 Sum_probs=192.3
Q ss_pred EEEEEEEEECCCC--CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---hHHh
Q 000687 1083 VELKHVDFSYPSR--PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSL 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~--~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---l~~l 1157 (1350)
|+|++|++.|+.. +..++|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 1246999999999999999999999999999999999999999999999998887775 5567
Q ss_pred hcccEEEccCCCCCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1158 RRHMAIVPQEPCLFA-STIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~-gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++||+|+|++.|++ .|+.+|++|+-+ ..+.+| +.+.++.+|+.|+-.+- ..+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~y-----------P~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRY-----------PAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccC-----------chhcCcchhhHH
Confidence 789999999999997 799999998743 234444 45667777777665544 478999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||..+|+||+.|||||||||+|-+.|.+.|++.- -|-|+++|||.|+.+++ |||++||++|+|+|.|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998764 48999999999999976 9999999999999999999999
Q ss_pred hcCCC
Q 000687 1308 KNNPD 1312 (1350)
Q Consensus 1308 ~~~~~ 1312 (1350)
.+ |.
T Consensus 231 ~~-Pk 234 (339)
T COG1135 231 AN-PK 234 (339)
T ss_pred cC-cc
Confidence 87 54
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-48 Score=396.82 Aligned_cols=219 Identities=31% Similarity=0.519 Sum_probs=198.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-----cEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS-----GQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~i~g~~~~~--~~~ 499 (1350)
.++++|+++.|++ ..+|+|||++|++++++|++||||||||||++++.|+.+..+ |+|.++|+||.+ ++.
T Consensus 7 ~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 5899999999973 469999999999999999999999999999999999999875 999999999975 578
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
..+|++||+|+|.|.-|+.||+||+.||.... -++-++++++.|.+++.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 89999999999999999999999999995311 12446778888988887643 456778889999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|+||||||.-+|+|||||||||||||.+...|.+.|.+++++-|+|+|||.+....+ +|+...+..|+++|.|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998766 9999999999999999999998
Q ss_pred hcc
Q 000687 653 AKG 655 (1350)
Q Consensus 653 ~~~ 655 (1350)
.++
T Consensus 237 ~~P 239 (253)
T COG1117 237 TNP 239 (253)
T ss_pred cCc
Confidence 874
No 112
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2e-46 Score=427.26 Aligned_cols=194 Identities=26% Similarity=0.373 Sum_probs=162.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|.|+||+|+|++++ .++++++|-|.++++||+|||||+|||||++++.+...|+.|.|.-.-. .++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 489999999998654 6899999999999999999999999999999999999999998876432 234
Q ss_pred EEEccCC---CCCcccHHHHhccCCCC-CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1162 AIVPQEP---CLFASTIYENIAYGHES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp---~LF~gTIreNL~~~~~~-~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
++.-|.- ..++.|.-|++..-.++ -..+++...+...|+....... ++ .+||+|||.||++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHh
Confidence 4444433 34677888888766554 4567788888999887443332 23 579999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeee
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~ 1300 (1350)
+.|.||||||||++||.+|-....++|.+.-. +||+|+|+...|.. +++|.+.+||.+...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~~G--gvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEFPG--GVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhccCC--ceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 99999999999999999999999999987544 89999999999966 899999999998764
No 113
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-46 Score=434.04 Aligned_cols=224 Identities=29% Similarity=0.497 Sum_probs=196.4
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--
Q 000687 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS-- 496 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~-- 496 (1350)
..+.|+++|++|+|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 35689999999999642 3469999999999999999999999999999999999997 579999999999973
Q ss_pred CCHHHHhcceEEEcccCccccccHHHHhhcCCC--CCCHHHH-----HHHHHHHchHHHHhcCCCCccccccCCCCCCCh
Q 000687 497 LKLRWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNEI-----EEAARVANAYSFIIKLPDGFDTQVGERGVQLSG 569 (1350)
Q Consensus 497 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~~~~~~-----~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSg 569 (1350)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++. .++++.++ |++++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCH
Confidence 455678999999999999999999999998642 1233333 22333333 445667889999999999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~ 648 (1350)
||||||+|||||+++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||+|+||++|+|++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998888999999999999987 999999999999999999
Q ss_pred HHHHhcc
Q 000687 649 DELIAKG 655 (1350)
Q Consensus 649 ~~l~~~~ 655 (1350)
+++...+
T Consensus 309 ~~l~~~~ 315 (329)
T PRK14257 309 KTIFIHP 315 (329)
T ss_pred HHHhcCC
Confidence 9998764
No 114
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-47 Score=386.63 Aligned_cols=218 Identities=31% Similarity=0.524 Sum_probs=197.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc-----cEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS-----GRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--i~l 1154 (1350)
.++++|+++-|.. +.+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 5899999999963 469999999999999999999999999999999999999875 999999999976 579
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCC------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
..+|+++|+|+|.|--|..||+||+.||..- .-||-++++++.|.|||-+.. . +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---r----L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---R----LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---H----hhCCccCCChhHHH
Confidence 9999999999999999999999999998421 224557889999999998753 2 34567789999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
||||||||.-+|+|||||||||||||.+-..|.+.|.++.++-|+|+|||.+.-.. -+|+...|-.|+++|+|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 99999999999999999999999999999999999999999999999999999874 58999999999999999999998
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 76
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.5e-46 Score=415.57 Aligned_cols=236 Identities=46% Similarity=0.794 Sum_probs=218.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999643 246999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|+||++.+|+.|++|||.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986554566778888888999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|||||||++||+.+...+.+.|++..+|+|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|..+++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~~ 236 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQL 236 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHhc
Confidence 9999999999999999999999998779999999999999988999999999999999999999977 6888887753
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-45 Score=417.28 Aligned_cols=241 Identities=32% Similarity=0.562 Sum_probs=223.6
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhh
Q 000687 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR 1158 (1350)
..|.|+++|++++|+.. ..++|+|+||+|+|||.+||+|+||||||||+++|+|+++|++|+|++||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24699999999999999999999999999999999999999999999999999999988999
Q ss_pred cccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
++++|+||+|.+|++|+++|+.+... ..+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++|||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999986532 35667888999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHH
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
+|++|||||||++||++++..+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++++. .++.|+.+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 252 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ-EDGVFASL 252 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc-cchHHHHH
Confidence 99999999999999999999999999987779999999999999999999999999999999999999876 47789888
Q ss_pred HHhh
Q 000687 1319 IQLQ 1322 (1350)
Q Consensus 1319 ~~~q 1322 (1350)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7654
No 117
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-46 Score=392.20 Aligned_cols=220 Identities=34% Similarity=0.562 Sum_probs=194.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.|+++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcch--HHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANAD--KFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~td----eei~~al~~a~l~--~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
||-|..-||. .||.|||..-.. .-+. +++.+-+++++++ +|..+.| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999995 599999985421 2233 3455666777775 3555554 67999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHhhcC
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl~~~ 1310 (1350)
|||..+|+||+||||.+||||-|...+|+-+.+.-+ |+|+|+|||++++. +-+|||+||++|+|+.+|+|++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~- 226 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN- 226 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC-
Confidence 999999999999999999999999999999987653 89999999999986 66999999999999999999999987
Q ss_pred CCchhHH
Q 000687 1311 PDGCYAR 1317 (1350)
Q Consensus 1311 ~~g~y~~ 1317 (1350)
|...|-+
T Consensus 227 Pan~FV~ 233 (309)
T COG1125 227 PANDFVE 233 (309)
T ss_pred ccHHHHH
Confidence 6665544
No 118
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-43 Score=381.72 Aligned_cols=472 Identities=19% Similarity=0.235 Sum_probs=356.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 152 YFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIH 231 (1350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 231 (1350)
+++++..+.++.+.+........++++..++|.++.++++..|+.-+++- ++++++.++++|+..|. +-...++.+.+
T Consensus 53 ~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~q 130 (546)
T COG4615 53 EFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELVQ 130 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHHH
Confidence 34444444455566666777888999999999999999999999999987 99999999999999998 44556788999
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHH-
Q 000687 232 YLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKAL- 310 (1350)
Q Consensus 232 ~~~~~~~~~i~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~f~~e~~~~- 310 (1350)
.....+++.+.+.|+++++.+++++.+.+.++...+...+..+.....++..+++.+..+..+.|-+..+......+..
T Consensus 131 a~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h 210 (546)
T COG4615 131 AIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVH 210 (546)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHH
Confidence 9999999999999999999999888888888888888888888888999999999999999999999988765433221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 311 -QAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSIS 389 (1350)
Q Consensus 311 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 389 (1350)
+.|....+..++...+..........+.+++.+....+++|+..... --+.....++...+++...|+.+....++
T Consensus 211 ~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgilP 287 (546)
T COG4615 211 NNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGILP 287 (546)
T ss_pred hhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhhhh
Confidence 22222222222211111111112223334444444444555443321 12222333444555666679999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcH
Q 000687 390 AFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGK 469 (1350)
Q Consensus 390 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 469 (1350)
.+..|.+|++||.++-..++.. ..+. ....+.. ..||++||.|+|++. .--+..||++|++||++-|+|.|||||
T Consensus 288 ~l~~AqvA~~kiakle~~~~~a-~~~~-~q~~p~~-~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGK 362 (546)
T COG4615 288 TLLTAQVAFNKIAKLELAPYKA-DFPR-PQAFPDW-KTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGK 362 (546)
T ss_pred HHHHHHHHHHHHHHhhcCCccc-cCCC-CCcCCcc-cceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcH
Confidence 9999999999999875433221 1111 1122222 369999999999743 245789999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCC-CCHHHHHHHHHHHchHHH
Q 000687 470 STVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD-ADLNEIEEAARVANAYSF 548 (1350)
Q Consensus 470 STl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~-~~~~~~~~~~~~~~~~~~ 548 (1350)
||++++|.|+|.|++|+|++||.++..-++++.|+-++-|+-|.+||+.++ |.+. ++.+.+..-++.-.+...
T Consensus 363 ST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~k 436 (546)
T COG4615 363 STLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHK 436 (546)
T ss_pred HHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999998754 2222 555555544444333322
Q ss_pred HhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCch
Q 000687 549 IIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLS 626 (1350)
Q Consensus 549 i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 626 (1350)
. ++-+|--+ ...||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+-... .|||++.||||-.
T Consensus 437 t-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~ 510 (546)
T COG4615 437 T-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDH 510 (546)
T ss_pred h-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCch
Confidence 2 12122111 24699999999999999999999999999999999999998887765443 5999999999999
Q ss_pred hhhhcCEEEEEeCCEEEEe
Q 000687 627 TIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 627 ~~~~~D~i~vl~~G~i~~~ 645 (1350)
....|||++.|++|+++|.
T Consensus 511 YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 511 YFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhHHHHHHHhcCceeec
Confidence 9999999999999999985
No 119
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.9e-45 Score=407.79 Aligned_cols=235 Identities=50% Similarity=0.846 Sum_probs=214.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 246999999999999999999999999999999999999999999999999998888788889999
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++++|+.|++||+.++.+....+++.++++..++.+.+..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455666777777888999999999999999999999999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~ 665 (1350)
|||||||++||+.+...+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|++++++.+ .+.|..+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999876 577776553
No 120
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-45 Score=381.52 Aligned_cols=228 Identities=35% Similarity=0.536 Sum_probs=193.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WL 502 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~ 502 (1350)
..|++++|+|+|++ +.||+|+||+|++||+++|+||||||||||+++|.|+..|++|+|.++|.|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 36999999999964 4699999999999999999999999999999999999999999999999999988754 57
Q ss_pred hcceEEEcccCccccc-cHHHHhhcCCCC---CCHHHHHHHHHHHchHHHHhcCCCCcccc-ccCCCCCCChhHHHHHHH
Q 000687 503 RQQIGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQ-VGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~-v~~~g~~LSgGqkqri~i 577 (1350)
|+++|+++|...||+. ||+||+.|...+ .+++.+.+.+.. .++.. |+... ....+++||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~-----KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLM-----KLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHH-----HHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999976 999999986432 233344332211 11111 55544 334578999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+..||+|+++|||||+|||.+...+.+.|+++.. |.|+|+|||+++++.. ||||+++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998864 8999999999999877 899999999999999999999986
Q ss_pred cCCcHHHHHH
Q 000687 655 GENGVYAKLI 664 (1350)
Q Consensus 655 ~~~~~~~~l~ 664 (1350)
++...++++
T Consensus 237 -d~P~v~qf~ 245 (263)
T COG1127 237 -DDPWVRQFF 245 (263)
T ss_pred -CCHHHHHHh
Confidence 345444443
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.3e-45 Score=399.14 Aligned_cols=214 Identities=36% Similarity=0.578 Sum_probs=189.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4899999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccCcc-ccccHHHHhhcCCCC----------CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 507 GLVSQEPAL-FATTIKENILLGRPD----------ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~~Ni~~g~~~----------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
|||||++.. |.-||+|-+.+|+-. .+.+.+.++++..++.++. .+.-.+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999754 566999999999642 1222355666666555544 444568999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecChHHHH
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTI-RKADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
.|||||+++|+||+||||||+||..+.-.+++.++++. +|+|+|+|.|+++.. +.||++++|++|+|+..|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 489999999999986 569999999999999999999988
Q ss_pred hc
Q 000687 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 122
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-45 Score=410.63 Aligned_cols=220 Identities=34% Similarity=0.551 Sum_probs=191.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++. .+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.|||.+++++++.. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999732 2899999999999999999999999999999999999999999999999999998876 689
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCC------HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDAD------LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~------~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|+|||+..||+. ||+|||.|+..... ++++.++++..+ ++..+..++.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~-----------l~~lL~r~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLG-----------LEHLLNRKPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcC-----------ChhHHhcCcccCChhhHHHHHHHH
Confidence 999999999976 99999999975332 334455555554 444555666799999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+++|+++|||||+|+||++.+..+...|+++.+ +.|+|+||||..++.. ||||.||++|+|.+.|++.|+..++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988753 7899999999998875 99999999999999999999998754
Q ss_pred CcHHHH
Q 000687 657 NGVYAK 662 (1350)
Q Consensus 657 ~~~~~~ 662 (1350)
+..-+.
T Consensus 227 n~fVA~ 232 (338)
T COG3839 227 NLFVAG 232 (338)
T ss_pred chhhhh
Confidence 433333
No 123
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-44 Score=402.58 Aligned_cols=235 Identities=52% Similarity=0.848 Sum_probs=218.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999632 36999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|+||+|.+|++|++||+.++....+++++.++++.+++.+++..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987665677788888899999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|||||||++||+.+...+.+.|++..+|+|+|+++|+++.+..||++++|++|++++.|+++++..+ .+.|.+++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHHhc
Confidence 9999999999999999999999987678999999999999988999999999999999999999876 6777777654
No 124
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-44 Score=402.43 Aligned_cols=233 Identities=57% Similarity=0.925 Sum_probs=215.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|+||+|.+|..|++||+.++....+.+++.+.++..++.+++..+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566777788888899999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHH
Q 000687 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++.. .+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ--GGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc--Ccchhhh
Confidence 9999999999999999999999998789999999999999988999999999999999999999876 5656543
No 125
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.7e-44 Score=398.18 Aligned_cols=221 Identities=38% Similarity=0.642 Sum_probs=207.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 568999999999743 2469999999999999999999999999999999999999999999999999998898899999
Q ss_pred cEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
++|+||+|.+|++|++|||.+... .+.+++.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 5678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999988778999999999999999999999999999998863
No 126
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-45 Score=379.99 Aligned_cols=217 Identities=37% Similarity=0.585 Sum_probs=189.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---HHHHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK---LRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~---~~~~r 503 (1350)
+|+++||+..||+ ...+|+||||+|++||++||+||||||||||+++|.|+.+|++|+|.++|.++..++ .+.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 6999999999984 457999999999999999999999999999999999999999999999999998887 55678
Q ss_pred cceEEEcccCccccc-cHHHHhhcCCCCC-----------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 504 QQIGLVSQEPALFAT-TIKENILLGRPDA-----------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
++|||++|++.|.+. ||.+|+..|+-.. +.++. ..+.+.++++ |+....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk------~~Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDK------AQALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHH------HHHHHHHHHc--CcHHHHHHHhccCCcch
Confidence 899999999999866 9999999886422 22222 2223333444 55555666778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~ 648 (1350)
+|||+|||||+++|+|+|-|||+|+|||.+.+.|++.|+++. .|.|+|+.-|.++.+++ ||||+-|++|+|+..|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999999874 58999999999999876 999999999999999999
Q ss_pred HHHHh
Q 000687 649 DELIA 653 (1350)
Q Consensus 649 ~~l~~ 653 (1350)
+|+-+
T Consensus 233 ~el~~ 237 (258)
T COG3638 233 SELTD 237 (258)
T ss_pred hhhhH
Confidence 99754
No 127
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.2e-44 Score=402.14 Aligned_cols=235 Identities=62% Similarity=1.001 Sum_probs=215.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+...+.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533347999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|+||+|.+|..|++||+.++....+.+++.+.++..++.+++..+|.|+++.+.....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566777788888899999999999999999998999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHHH
Q 000687 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|||||||++||+.+.+.+.+.|++..+|+|+|++||+++.+..||+|++|++|++++.|+++++... .+.++.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ--KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc--ChhHHHHh
Confidence 9999999999999999999999987788999999999999999999999999999999999999865 45555554
No 128
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.5e-44 Score=443.52 Aligned_cols=208 Identities=27% Similarity=0.412 Sum_probs=169.5
Q ss_pred CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC---CCcEEEECCeeCCCCCHHHHhcceEEEcccCccccc-
Q 000687 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP---TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFAT- 518 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~---~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~- 518 (1350)
..+|+|+|.-++||+.+.+.||.|||||||+++|+|-.+- ..|+|..||.+.++... ++.++|++|+..-|..
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~---~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVP---KKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCccccccc---CceEEecccccccccee
Confidence 4699999999999999999999999999999999998764 25799999999988776 7789999998877754
Q ss_pred cHHHHhhcCCCC------CC-HHHHHHHHHHHchHHHHhcCCCCccccccCCC-CCCChhHHHHHHHHHHhccCCCEeEE
Q 000687 519 TIKENILLGRPD------AD-LNEIEEAARVANAYSFIIKLPDGFDTQVGERG-VQLSGGQKQRIAIARAMLKNPAILLL 590 (1350)
Q Consensus 519 ti~~Ni~~g~~~------~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g-~~LSgGqkqri~iARal~~~~~illl 590 (1350)
||||-+.|.... .+ .++.+..+...+..-.+-.|....||.||... ...|||||.||++|-+++.+++++.+
T Consensus 205 TVreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred EEeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeee
Confidence 999999885320 11 11111111122222234466778899999875 46999999999999999999999999
Q ss_pred ecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCch--hhhhcCEEEEEeCCEEEEecChHHHHh
Q 000687 591 DEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLS--TIRKADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 591 DE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~--~~~~~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||+|.+||..|.-++.++|+++.+ +.|.++.=|..+ +....|.|++|.+|+++.+|+.++.+.
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~ 351 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLP 351 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHH
Confidence 999999999999999999998753 788888888765 455699999999999999999998863
No 129
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.4e-44 Score=402.91 Aligned_cols=240 Identities=33% Similarity=0.538 Sum_probs=218.1
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH
Q 000687 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
...|.|+++|++++|+.. +.++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 346789999999999742 2469999999999999999999999999999999999999999999999999998888888
Q ss_pred hcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 503 RQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
|+.++||+|+|.+|++|++||+.+... ...++++++.+..++.+.+..+|.|+++.+++.+.+||||||||++|||||+
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976532 2345677788888899999999999999999999999999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHH
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~ 662 (1350)
++|++|||||||++||++++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. ++.|++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~-~~~~~~ 251 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE-DGVFAS 251 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc-chHHHH
Confidence 9999999999999999999999999999877799999999999999889999999999999999999998752 566777
Q ss_pred HHH
Q 000687 663 LIR 665 (1350)
Q Consensus 663 l~~ 665 (1350)
++.
T Consensus 252 ~~~ 254 (257)
T cd03288 252 LVR 254 (257)
T ss_pred HHh
Confidence 664
No 130
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.7e-44 Score=417.11 Aligned_cols=232 Identities=36% Similarity=0.565 Sum_probs=193.4
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
+|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999996321 246999999999999999999999999999999999999999999999999998887654 5
Q ss_pred hcceEEEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|++||||||++.+|. .|++||+.++.. ..+.++..+. +.+.+..+ |+.......+.+|||||||||+|||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~-----v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IAR 153 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRK-----VTELLALV--GLGDKHDSYPSNLSGGQKQRVAIAR 153 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999995 699999998642 1222222211 11222222 5555566777899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|++++++..+.
T Consensus 154 AL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~ 233 (343)
T TIGR02314 154 ALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPK 233 (343)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCC
Confidence 99999999999999999999999999999998853 8999999999999976 99999999999999999999987644
Q ss_pred CcHHHHHHH
Q 000687 657 NGVYAKLIR 665 (1350)
Q Consensus 657 ~~~~~~l~~ 665 (1350)
...++.++.
T Consensus 234 ~~~~~~~~~ 242 (343)
T TIGR02314 234 TPLAQKFIR 242 (343)
T ss_pred cHHHHHHHh
Confidence 445555543
No 131
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-44 Score=398.28 Aligned_cols=227 Identities=49% Similarity=0.853 Sum_probs=212.8
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
|.|+++|++++|+.. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|.+|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 468999999999632 359999999999999999999999999999999999999999999999999988888889999
Q ss_pred cEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
++|+||++.+|.+|++||+.++.+...++++.++++..++.+++..+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876655677888888999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999988765
No 132
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-44 Score=362.46 Aligned_cols=208 Identities=34% Similarity=0.533 Sum_probs=182.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r 503 (1350)
+|+|+||++.|++. .++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+.. ..+|
T Consensus 1 mI~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 1 MIRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred CeeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhh
Confidence 48999999999864 569999999999999999999999999999999999999999999999999987754 4699
Q ss_pred cceEEEcccCccccc-cHHHHhhcCCCC--CC----HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 504 QQIGLVSQEPALFAT-TIKENILLGRPD--AD----LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~ 576 (1350)
++||+|+||..|... ||+||++|...- .. .+++.++++.+++.+....|| .+||||||||+|
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRva 147 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVA 147 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHH
Confidence 999999999988754 999999986431 12 234556677776666666665 589999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
||||++.+|++||-||||.+|||++...|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 9999999999999999999999999999999999885 59999999999999987 56999999999987543
No 133
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-44 Score=383.06 Aligned_cols=210 Identities=38% Similarity=0.564 Sum_probs=173.8
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH----HH
Q 000687 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR----WL 502 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~----~~ 502 (1350)
++++||++.|.... ...+|+++||+|++||++||+||||||||||+++|.|+..|++|+|.++|+|+..++.+ ..
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 24699999999999999999999999999999999999999999999999999988753 24
Q ss_pred hcceEEEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCcccccc-CCCCCCChhHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVG-ERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~-~~g~~LSgGqkqri~iA 578 (1350)
|++||||+|+..|++. |++|||.+... .....+..++ +.+....+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 5689999999999876 99999985321 1111111111 11222222 5554444 66889999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~ 644 (1350)
|||+.+|+|++.||||++||.++.+.|.+.+.++. .|+|+|+|||+......|||++.|+||++..
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999884 4899999999999999999999999999543
No 134
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=410.21 Aligned_cols=214 Identities=33% Similarity=0.574 Sum_probs=188.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++||+++|+ +..+++|+||+|++||+++|+|||||||||++++|+||..|++|+|.+||+++..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 34799999999999999999999999999999999999999999999999999998876 468
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC---CCHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD---ADLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
||+|||+..||+. ||+|||.||... ...+ ++.++++.+++. ..-.+++.+|||||||||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~-----------~~~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLE-----------GFADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCch-----------hhhhhChhhhChHHHHHHHH
Confidence 9999999999975 999999999761 1222 344555555444 34456677999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||..+|++||||||.||||.+-+..++..++++. .|.|.|+|||+-++.. .+|||.||++|+|...|+++|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999998874 4999999999998865 5999999999999999999999987
Q ss_pred c
Q 000687 655 G 655 (1350)
Q Consensus 655 ~ 655 (1350)
+
T Consensus 228 P 228 (352)
T COG3842 228 P 228 (352)
T ss_pred c
Confidence 5
No 135
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-43 Score=397.15 Aligned_cols=226 Identities=62% Similarity=0.964 Sum_probs=208.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999998877778889999
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655555667777778888999999999999999999999999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999999999999999999999998779999999999999988999999999999999999998765
No 136
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.6e-44 Score=416.09 Aligned_cols=226 Identities=31% Similarity=0.524 Sum_probs=193.8
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR 1158 (1350)
|+++||+++|+... ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996421 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEccCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++|+||||++.+|. .|++||+.++.. ..+. +.+.++++.+++.++.... ...||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~-----------~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSY-----------PSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999995 799999987531 1232 3456777777776655443 4579999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+|||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 8999999999999965 99999999999999999999987
Q ss_pred cCCCchh-HHHHH
Q 000687 1309 NNPDGCY-ARMIQ 1320 (1350)
Q Consensus 1309 ~~~~g~y-~~l~~ 1320 (1350)
. |...+ .+++.
T Consensus 231 ~-p~~~~~~~~~~ 242 (343)
T TIGR02314 231 H-PKTPLAQKFIR 242 (343)
T ss_pred C-CCcHHHHHHHh
Confidence 5 44433 44443
No 137
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.6e-44 Score=356.50 Aligned_cols=209 Identities=37% Similarity=0.590 Sum_probs=186.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|.+++|.|+|...+ =.++++|++||++||+||||||||||+++|+||..|.+|+|.|+|+|....++.+ +-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 67889999996432 2578999999999999999999999999999999999999999999998776653 5699
Q ss_pred EEcccCccccc-cHHHHhhcCCCC------CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 508 LVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
+++||..||.- ||.+||.+|... .+.+.+..++..+++..+..+||. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999976 999999999641 234567888888998888888874 799999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++-|||+||||+|+|||.-+......+.++. ++.|+++|||.++.+.. +|+++++++|+|.++|+.++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999888875 58899999999999876 999999999999999999998865
No 138
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-43 Score=396.86 Aligned_cols=233 Identities=55% Similarity=0.867 Sum_probs=212.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 235999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++.+..+.+++.++++..++.+.+..+|.|+++.++.++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999988665555667777888889999999999999999999999999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
|||||||++||+++...+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++..+ ...|+.++
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHH
Confidence 9999999999999999999999988668999999999999988999999999999999999998765 45555444
No 139
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-43 Score=394.29 Aligned_cols=227 Identities=53% Similarity=0.876 Sum_probs=209.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
+.|+++|++++|++ ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999963 2359999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|.+|++||+.++.+....+++.++++..++.+++..+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999886655556777788888899999999999999999999999999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999888999999999999999998887654
No 140
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-44 Score=380.92 Aligned_cols=202 Identities=38% Similarity=0.555 Sum_probs=171.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.+++++|+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 5899999999974 4699999999999999999999999999999999999999999999999987443 3479
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCCCC--HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPDAD--LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+||+|++.||+ .||+||+.+|..... .++-.+ .+.+.+... |+...-+..+.+||||||||+||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~-----~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARE-----RAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHH-----HHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 99999999996 599999999876421 111111 222333333 66666667778999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC--CEEE
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQ--GSVS 643 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~--G~i~ 643 (1350)
+|+||+||||++|||+.|+..+++.+.++. .++|+++|||++++.-. +|||+||.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999998874 47999999999998765 999999998 5553
No 141
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.7e-43 Score=396.36 Aligned_cols=227 Identities=74% Similarity=1.096 Sum_probs=207.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|+++.|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997432346999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987655455666667777788899999999999999999999999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||||++||+.+.+.+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999987778999999999999888999999999999999999888764
No 142
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.8e-44 Score=387.71 Aligned_cols=214 Identities=35% Similarity=0.575 Sum_probs=193.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.++++|++|+|++ +++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999973 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCC-CCCcccHHHHhccCCCC-------CC--HH-HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1162 AIVPQEP-CLFASTIYENIAYGHES-------AT--ES-EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp-~LF~gTIreNL~~~~~~-------~t--de-ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||||++ .-|.-|++|=+.+|+-. .+ |+ .+.+|++..++.++..+. -..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHH
Confidence 9999997 45677999999887521 12 33 478889999999886542 245999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
.|||||.++|+||+||||||+||....-+|++.+++.. +|+|+|+|.|+++.. +.||++++|++|+|+.+|+|++.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999876 479999999999876 669999999999999999999998
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 65
No 143
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-44 Score=374.23 Aligned_cols=227 Identities=30% Similarity=0.491 Sum_probs=190.9
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC-ChHHhhc
Q 000687 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY-NLKSLRR 1159 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i-~l~~lR~ 1159 (1350)
.++.+|+++.|+... ..++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.++... .....++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 11599999999999999999999999999999999999999999999999876543 3346788
Q ss_pred ccEEEccCCC--CC-cccHHHHhccC----CCCCCHHHHHHHHHHhcchHHH-hcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1160 HMAIVPQEPC--LF-ASTIYENIAYG----HESATESEIIEAARLANADKFI-SSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp~--LF-~gTIreNL~~~----~~~~tdeei~~al~~a~l~~~I-~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
.+.+|+|||. |= .-||++-|.-+ .-+-...+++++++.+++.+-. .+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 8999999995 21 23666655422 1123455689999999987643 3444 579999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||.-+|++||||||||+||.-..+.|++.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.++-++++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998876 4599999999999976 99999999999999999999997
Q ss_pred cCCCchhHHHHH
Q 000687 1309 NNPDGCYARMIQ 1320 (1350)
Q Consensus 1309 ~~~~g~y~~l~~ 1320 (1350)
. +...|.+...
T Consensus 232 ~-~~h~ytr~Ll 242 (252)
T COG1124 232 H-PSHPYTRELL 242 (252)
T ss_pred C-CccHHHHHHH
Confidence 7 6677776554
No 144
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-44 Score=401.75 Aligned_cols=218 Identities=37% Similarity=0.652 Sum_probs=197.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+.+|.+. .+|+|+||+|+.||.++|+|||||||||++++|+||.+|++|+|+|||.|+.++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999642 2999999999999999999999999999999999999999999999999999999976 789
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCC------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
++|+|+..||.- ||+|||.|+... --++++.++++..++.+++++.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999965 999999998542 12566889999999999888776 579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++++||||.|+||++....+..-|+++.+ +.|+|.|||+...++. +|||+||.+|+|.+.|+|.|+..+ |
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~-P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER-P 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC-c
Confidence 99999999999999999999999999999988543 7899999999988755 999999999999999999999987 6
Q ss_pred CchhH
Q 000687 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
.+.|-
T Consensus 226 ~n~fV 230 (338)
T COG3839 226 ANLFV 230 (338)
T ss_pred cchhh
Confidence 66553
No 145
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=387.52 Aligned_cols=215 Identities=38% Similarity=0.642 Sum_probs=192.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC-CCCHHHHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK-SLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~-~~~~~~~r~~ 505 (1350)
.++++|++|+|+++ .++|+|+||+|++|+.++|+|+||||||||+++|.|++.|++|+|.++|.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 58999999999854 57999999999999999999999999999999999999999999999999998 4888999999
Q ss_pred eEEEcccC--ccccccHHHHhhcCCCCC--CHHHHH----HHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 506 IGLVSQEP--ALFATTIKENILLGRPDA--DLNEIE----EAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 506 i~~v~Q~~--~lf~~ti~~Ni~~g~~~~--~~~~~~----~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
+|||+|+| .+|..||.|.++||..+. +.+++. ++++.+ |+.........+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~v-----------gl~~~~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELV-----------GLEELLDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHc-----------CchhhccCCccccCCcceeeHHh
Confidence 99999999 789999999999997643 333333 333333 44444566778999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|.+|..+|++||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|++.++.++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 5899999999999987 999999999999999999998865
No 146
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=372.67 Aligned_cols=228 Identities=32% Similarity=0.503 Sum_probs=184.8
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC-CHHHHhc
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL-KLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~-~~~~~r~ 504 (1350)
.++++|+++.|+... -.++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997431 12499999999999999999999999999999999999999999999999877654 3346788
Q ss_pred ceEEEcccCc--ccc-ccHHHHhhcCCCC----CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 505 QIGLVSQEPA--LFA-TTIKENILLGRPD----ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 505 ~i~~v~Q~~~--lf~-~ti~~Ni~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
.|.+|||||. |-+ -||++-|.-+... ...+++.++++.+++.+ .....++.+|||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~----------~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPP----------SFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCH----------HHHhcCchhcChhHHHHHHH
Confidence 9999999995 322 3777766533221 12233444444443322 34556788999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||.-+|++||||||||+||+.....|.+.+.++.+ +-|.|+|||+++.+.+ ||||+||++|+|+|.++-+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999999998875 5699999999999987 999999999999999999999876
Q ss_pred cCCcHHHHHH
Q 000687 655 GENGVYAKLI 664 (1350)
Q Consensus 655 ~~~~~~~~l~ 664 (1350)
+.+.+-+.|.
T Consensus 233 ~~h~ytr~Ll 242 (252)
T COG1124 233 PSHPYTRELL 242 (252)
T ss_pred CccHHHHHHH
Confidence 4333333343
No 147
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-43 Score=388.64 Aligned_cols=220 Identities=37% Similarity=0.583 Sum_probs=204.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++++|+.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 458999999999742 2469999999999999999999999999999999999999999999999999988888888999
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|+.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 4567788888889999999999999999999999999999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999998875
No 148
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-43 Score=368.37 Aligned_cols=224 Identities=33% Similarity=0.511 Sum_probs=194.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR 1158 (1350)
.|++++|+++|.+ ..||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+++|.|+.+++.+ .+|
T Consensus 8 ~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 5999999999964 3699999999999999999999999999999999999999999999999999988764 569
Q ss_pred cccEEEccCCCCCcc-cHHHHhccCCC---CCCHHHHH----HHHHHhcchHHH-hcCCCCccccccCCCCCCChhHHHH
Q 000687 1159 RHMAIVPQEPCLFAS-TIYENIAYGHE---SATESEII----EAARLANADKFI-SSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~---~~tdeei~----~al~~a~l~~~I-~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
+++|+++|...||+. ||+||+.+.-. ..+++++. ..++.+|+..-+ ... .+.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----------PsELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLY-----------PSELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----------chhhcchHHHH
Confidence 999999999999976 99999998532 34555443 345566666552 233 46799999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
+||||||.-+|+||++|||||+|||.+...+-+.|+++.+ |.|+++|||+++++.. ||||+++.+|+|+-.|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999988764 8899999999999866 799999999999999999999
Q ss_pred hhcCCCchhHHHHH
Q 000687 1307 LKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~ 1320 (1350)
.+. ++...++++.
T Consensus 234 ~~s-d~P~v~qf~~ 246 (263)
T COG1127 234 LAS-DDPWVRQFFN 246 (263)
T ss_pred HhC-CCHHHHHHhc
Confidence 987 4555555544
No 149
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.8e-43 Score=387.93 Aligned_cols=220 Identities=41% Similarity=0.727 Sum_probs=203.5
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
|+|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 2469999999999999999999999999999999999999999999999999988887788899
Q ss_pred cEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
++|+||+|.+|..|++||+.++....+.+++.++++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999998765445566788889999999999999999999999888999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeec
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~G 1301 (1350)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999887668999999999988889999999999998865
No 150
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=385.80 Aligned_cols=215 Identities=36% Similarity=0.637 Sum_probs=196.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC-CCChHHhhcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR-KYNLKSLRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~i~l~~lR~~ 1160 (1350)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|.|.+||.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred cEEEccCC--CCCcccHHHHhccCCCC--CCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEP--CLFASTIYENIAYGHES--ATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp--~LF~gTIreNL~~~~~~--~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+|+|+|+| .+|..||.+.++||..+ .+.+| +.++++.+++.++-... ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 79999999999998643 44444 66778888887774443 46899999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|.+|..+|+|||||||||+||+...+.+.+.++++.+ |+|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999764 5899999999999987 999999999999999999999876
No 151
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-43 Score=404.78 Aligned_cols=221 Identities=27% Similarity=0.464 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC-------
Q 000687 1082 EVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY------- 1152 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 1152 (1350)
.|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------ChHHhhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhcchHHHhcCCCCcc-ccccCC
Q 000687 1153 ---------NLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYK-TFVGER 1218 (1350)
Q Consensus 1153 ---------~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdeei~~al~~a~l~~~I~~lp~Gld-t~vge~ 1218 (1350)
+...+|++++||+|+| .+|+.|++|||.++.. ..++++..+. +.+++..+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKL-----AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6999999999987632 2344443221 12344443 453 345677
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHH-hhcCEEEEEeCCE
Q 000687 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTI-RNAHVIAVIDDGK 1296 (1350)
Q Consensus 1219 G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti-~~~DrI~Vl~~G~ 1296 (1350)
+.+||||||||++|||||+++|+||||||||++||+.++..+.+.|++.. +|+|+|+|||+++.+ ..||||+||++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998763 589999999999987 5699999999999
Q ss_pred EeeecChhHHhhc
Q 000687 1297 VAELGSHSHLLKN 1309 (1350)
Q Consensus 1297 IvE~Gt~~eLl~~ 1309 (1350)
|++.|+|++++..
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999998754
No 152
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-42 Score=394.80 Aligned_cols=210 Identities=24% Similarity=0.335 Sum_probs=169.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
..+++.+|+|.|++.+ .+.++++++++..-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~-y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSE-YQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcc-hhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 4699999999997543 2789999999999999999999999999999999999999999998876 789
Q ss_pred cEEEccCCCCC-cccH--HHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1161 MAIVPQEPCLF-ASTI--YENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1161 i~~VpQdp~LF-~gTI--reNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
|+|-.|..+=| +-.+ -+-+.-..|..+++|+.+.|...|+..-+..- + -..||||||=|+++|-+..
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~-----s-----i~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ-----S-----IASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc-----c-----ccccCCcchhHHHHHHHhc
Confidence 99999987633 2221 11111122445899999999888776544321 1 2469999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeee-cChhHHhhcCCCchh
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL-GSHSHLLKNNPDGCY 1315 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~-Gt~~eLl~~~~~g~y 1315 (1350)
.+|.+|||||||..||.++-..+-++|++... -||+|+|+.+.+.. |+.++|.++|+|.-. |. -..|
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~G--GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~---------~~~y 567 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKNFNG--GVVLVSHDEEFISSLCKELWVVEDGKVTPIEGG---------IDKY 567 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHhcCC--cEEEEECcHHHHhhcCceeEEEcCCcEEeeecc---------HHHH
Confidence 99999999999999999999999999987544 69999999999976 999999999999763 21 1247
Q ss_pred HHHHHhhh
Q 000687 1316 ARMIQLQR 1323 (1350)
Q Consensus 1316 ~~l~~~q~ 1323 (1350)
.++...+.
T Consensus 568 Kkl~~~e~ 575 (582)
T KOG0062|consen 568 KKLLGAEL 575 (582)
T ss_pred HHHHHHHH
Confidence 77766554
No 153
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-43 Score=378.14 Aligned_cols=210 Identities=33% Similarity=0.551 Sum_probs=182.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|++|+|.+.|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999742 59999999999999999999999999999999999999999999999988765432 4689
Q ss_pred EEEcccC---ccccccHHHHhhcCCCCC----------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 507 GLVSQEP---ALFATTIKENILLGRPDA----------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 507 ~~v~Q~~---~lf~~ti~~Ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
|||||.. |-|+-||+|-+.+|+... +.+++.++++.+++.++. .....+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----------~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----------DRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----------CCcccccCcHHHH
Confidence 9999965 568889999999985421 236677788777766553 3344579999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
|+.|||||+++|++|+|||||+++|+.++..|.+.|+++++ |+||++||||++.+.. +|+|+.|+ +++...|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999864 9999999999999865 99999995 578899999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 154
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.5e-43 Score=387.88 Aligned_cols=219 Identities=52% Similarity=0.828 Sum_probs=201.4
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhh
Q 000687 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR 1158 (1350)
..|.|+++|++++|+++.+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 46789999999999754334699999999999999999999999999999999999999999999999999888888888
Q ss_pred cccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
++++|+||+|.+|.+|++||+.++....+.+++++.++..++++++..+|.|+++.+.+...+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998755445566666677788899999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEE
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~I 1297 (1350)
+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778999999999999988999999999975
No 155
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-43 Score=403.27 Aligned_cols=222 Identities=30% Similarity=0.471 Sum_probs=189.6
Q ss_pred ceEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC------
Q 000687 426 GLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL------ 497 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~------ 497 (1350)
..|+++|++|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcceEEEcccC--ccccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccC
Q 000687 498 ----------KLRWLRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVGE 562 (1350)
Q Consensus 498 ----------~~~~~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~ 562 (1350)
....+|++|+||+|+| .+|+.||+|||.++.. ..+.++.. +. +.+.+..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~~--~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---KL--AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---HH--HHHHHHHc--CCChhHhcC
Confidence 3457889999999998 6899999999998742 12322222 11 23444444 664 46788
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCC
Q 000687 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQG 640 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~D~i~vl~~G 640 (1350)
.+.+||||||||++|||||+.+|+||||||||++||+.+++.+.+.|.++. +|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999998874 5899999999999875 59999999999
Q ss_pred EEEEecChHHHHhc
Q 000687 641 SVSEIGTHDELIAK 654 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~ 654 (1350)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998764
No 156
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-42 Score=383.52 Aligned_cols=220 Identities=47% Similarity=0.753 Sum_probs=200.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++++|++. ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999887777777889
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|..|++||+.++.+..+.+++.+.++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999889999998875544555677788888898999999999999999999999999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999886668999999999988779999999999998754
No 157
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-43 Score=390.37 Aligned_cols=213 Identities=34% Similarity=0.538 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh---HHhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l---~~lR~ 1159 (1350)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 369999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ccEEEccCCCCCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1160 HMAIVPQEPCLFAS-TIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~g-TIreNL~~~~~---~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
+++||||++.+|.. |++||+.++.. ..+.+ ++.++++..++.++.. ....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAED-----------LYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHH
Confidence 99999999999986 99999986521 12332 3445555555544332 334579999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+++|+||||||||++||+.+...+.+.|++..+ |+|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 8999999999999865 99999999999999999999875
Q ss_pred c
Q 000687 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 158
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.6e-43 Score=388.58 Aligned_cols=212 Identities=35% Similarity=0.597 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC-----CCCccEEEECCccCCCCC--hH
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY-----EPSSGRVMIDGKDIRKYN--LK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~-----~p~~G~I~idG~di~~i~--l~ 1155 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 66
Q ss_pred HhhcccEEEccCCCCCcccHHHHhccCCCC--C-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHES--A-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++|+||++.+|..|++||+.++... . .++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999865321 1 13456677777777665443221 4679999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|++|||||+++|++|||||||++||+.+.+.+.+.|++..+.+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999987655899999999999864 999999999999999998764
No 159
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=375.06 Aligned_cols=210 Identities=30% Similarity=0.534 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++|+|.++ +||+||||+|++||.+||+||||||||||+++++|+.+|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999643 59999999999999999999999999999999999999999999999998877543 5789
Q ss_pred EEEccCCC---CCcccHHHHhccCCCC----------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1162 AIVPQEPC---LFASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1162 ~~VpQdp~---LF~gTIreNL~~~~~~----------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
|||||... =|.-||+|=+.+|... .+.+++.+|++.+++.++..+ ++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHH
Confidence 99999653 4788999999877421 124789999999999988543 344 59999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS-GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 99999999999999999999999999999999999999864 9999999999999865 9999888 6788999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 864
No 160
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3.6e-43 Score=351.93 Aligned_cols=208 Identities=30% Similarity=0.534 Sum_probs=187.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR~ 1159 (1350)
|+|+||+.+|+.. +++|+||||+|++||.+=++|||||||||++++|++...|++|+|.++|.|++.+.-+ -||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999865 5799999999999999999999999999999999999999999999999999877644 5899
Q ss_pred ccEEEccCCCCC-cccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCLF-ASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF-~gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+||+|+||-.|. +-|+.||+++.-. ..+ .+.+.++++.+||.+-...+| ..|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 999999999866 5699999998642 122 345788999999999999988 5799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhhc-CEEEEEeCCEEeeecCh
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNA-HVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~-DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||++.+|++||-||||-+|||++...|++.+.+.- .|.||++.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998864 699999999999999775 68999999999976554
No 161
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=5.1e-39 Score=383.10 Aligned_cols=474 Identities=16% Similarity=0.153 Sum_probs=347.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccc---cChhHHHHHHHhhHHHHHHHHHH
Q 000687 802 YCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEE---NESARIAARLALDANNVRSAIGD 878 (1350)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~---~~~G~i~~r~s~D~~~i~~~~~~ 878 (1350)
.+.+|..++.+..++...+.++-..+..++-.-|-+.+.++-+...-.||.... +.+-..=.|+..|+...-+....
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 344566677777777788888888888888888888888888877754543211 11122446888888887776666
Q ss_pred hHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 000687 879 RIQVIVQNTALMLVACTAGF---------------VLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQL 943 (1350)
Q Consensus 879 ~l~~~~~~~~~~i~~~~~~~---------------~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1350)
....++.+++.++...+++. .+...+.++++..+++.-+..+...+.+.+.+-+..+.++..+..
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 66666666655555444433 112222333333333333334444444555566667777888888
Q ss_pred HHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q 000687 944 AGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIR 1023 (1350)
Q Consensus 944 ~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~ 1023 (1350)
+...-++.+.|..|+.|+...++..+..+.......+..........+.....++..++-+..++.....|.+++|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888999999999999888777666665554433333222222222333333334444455556667789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC--CCCCCCC--CCC--CCCCCCcEEEEEEEEECCCCCC
Q 000687 1024 VFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEI--EPDDPDA--TPV--PDRLRGEVELKHVDFSYPSRPD 1097 (1350)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~rv~~~l~~~~~~--~~~~~~~--~~~--~~~~~g~I~f~nVsf~Y~~~~~ 1097 (1350)
+..++......+.-+....+.+..-.+...|+.++.+.-... ++..... ... .......|+|+|++..-|..
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 999999989999999999999999999999998875332210 1100000 000 00114679999999998854
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHH
Q 000687 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYE 1177 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIre 1177 (1350)
.+.|+++||+|+|||.+-|.|+||||||||+++|.|+++--+|+|.+=. -+++-|+||.|++-.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHH
Confidence 3789999999999999999999999999999999999999999887641 13578999999999999999
Q ss_pred HhccCCCC--CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHH
Q 000687 1178 NIAYGHES--ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAE 1255 (1350)
Q Consensus 1178 NL~~~~~~--~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~ 1255 (1350)
-|.|++.. ++|+|+.+++.+++|.+++.++.+ . ..-..-||+|||||||+||.||++|++++|||||||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-E----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-c----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998754 899999999999999999998742 1 1234569999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEe
Q 000687 1256 SERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVID 1293 (1350)
Q Consensus 1256 te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~ 1293 (1350)
+|..+.+.+++...+.|+|.|+||.......++.+-++
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999999999999999998877766655443
No 162
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=356.86 Aligned_cols=473 Identities=19% Similarity=0.256 Sum_probs=356.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccChhHHHHHHHhhHHHHHHHHHHhHHHH
Q 000687 804 YLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVI 883 (1350)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~fFd~~~~~~G~i~~r~s~D~~~i~~~~~~~l~~~ 883 (1350)
..++++.+...+...+.......++++...++|.++.++++.+|+.-+++ -..++++.++++|+.+|. +-...++.+
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~~ 128 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPEL 128 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHHH
Confidence 34445555555666677778889999999999999999999999999976 678999999999999998 666778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHccHHHHHHhhh--HH
Q 000687 884 VQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNS--EL 961 (1350)
Q Consensus 884 ~~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~--e~ 961 (1350)
.+..+.++++++...+.++++.+++...+.+.++..++.....-+..+..++.+.+...+.+..++|-+..+...- +.
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 9999999999999999999987777766666665555544444444555667777888888899999988766543 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 962 MIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL 1041 (1350)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1350)
.+.+.|...-+...+...+...........++.+.+....+.+|+...+. .-+.....+..+.+.+...++.+++..
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgi 285 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGI 285 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhh
Confidence 33334433333222222222222223344556666666666666655432 222223344556677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCC
Q 000687 1042 APDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSG 1121 (1350)
Q Consensus 1042 ~~~~~~~~~a~~rv~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1121 (1350)
.|.+..+..+.+++.++-..++..+- ....+. +.-..||++||.|+|+.. .--+..||++|+.||.|=|+|.||
T Consensus 286 lP~l~~AqvA~~kiakle~~~~~a~~--~~~q~~--p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NG 359 (546)
T COG4615 286 LPTLLTAQVAFNKIAKLELAPYKADF--PRPQAF--PDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNG 359 (546)
T ss_pred hhHHHHHHHHHHHHHHhhcCCccccC--CCCCcC--CcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCC
Confidence 99999999999999886543322111 111112 223469999999999753 245889999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcccHHHHhccCCCC-CCHHHHHHHHHHhcc
Q 000687 1122 CGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES-ATESEIIEAARLANA 1200 (1350)
Q Consensus 1122 sGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-~tdeei~~al~~a~l 1200 (1350)
|||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++ +.+. ++++.+..-++.-.+
T Consensus 360 sGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998765 2222 566666555554444
Q ss_pred hHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHh--cCCceEEEEcc
Q 000687 1201 DKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRA--CSGKTTIVVAH 1278 (1350)
Q Consensus 1201 ~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~--~~g~TvI~IaH 1278 (1350)
.... ++.+|-=+ ...||-|||.|+|+--|++.+.||++|||=-+--||.=++...+.+--. ..|||++.|||
T Consensus 434 ~~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsH 507 (546)
T COG4615 434 AHKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISH 507 (546)
T ss_pred hhhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEec
Confidence 3332 22222111 1359999999999999999999999999999999999999988876543 36999999999
Q ss_pred CchHHhhcCEEEEEeCCEEeee
Q 000687 1279 RLSTIRNAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1279 Rlsti~~~DrI~Vl~~G~IvE~ 1300 (1350)
+=.-...|||++-|++|+++|.
T Consensus 508 Dd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 508 DDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred CchhhhhHHHHHHHhcCceeec
Confidence 9999999999999999999985
No 163
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.9e-42 Score=384.57 Aligned_cols=220 Identities=52% Similarity=0.847 Sum_probs=198.4
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH
Q 000687 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
...+.++++|++++|+++...++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34578999999999975323469999999999999999999999999999999999999999999999999887777778
Q ss_pred hcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 503 RQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+++++|++|++.+|..|++||+.++.......++.+.++...+.+++..+|.|+++.+++.+.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544444555555566778899999999999999999999999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i 642 (1350)
++|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999988778999999999999988999999999974
No 164
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-43 Score=362.38 Aligned_cols=223 Identities=30% Similarity=0.502 Sum_probs=194.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---hHHhh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---l~~lR 1158 (1350)
.|+++||+.+||+ +..+|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|.++|.++.... +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999998887 77788
Q ss_pred cccEEEccCCCCCc-ccHHHHhccCCCC-----------CCH---HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1159 RHMAIVPQEPCLFA-STIYENIAYGHES-----------ATE---SEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~~-----------~td---eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
++||+|+|.+-|-. -|+.+|+..|.-. .+. ....+|++.+++.++.. .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 99999999998875 4899999866422 223 34677888888887654 3456899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeee
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~ 1300 (1350)
|||+||++|||||..+|+|++-|||+|+|||.+.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999864 58999999999999865 999999999999999
Q ss_pred cChhHHhhcCCCchhHHHHHh
Q 000687 1301 GSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1301 Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|+++||-+ ..+.+.|..
T Consensus 230 g~~~el~~----~~~~~iYg~ 246 (258)
T COG3638 230 GPASELTD----EALDEIYGN 246 (258)
T ss_pred CChhhhhH----HHHHHHhcc
Confidence 99999643 345555543
No 165
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=9.9e-43 Score=345.23 Aligned_cols=209 Identities=35% Similarity=0.574 Sum_probs=188.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|.+++|.|+|...| =.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999997542 368899999999999999999999999999999999999999999999888775 46799
Q ss_pred EEccCCCCCcc-cHHHHhccCCCC------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
+++||.-||.- ||++|+.+|... ...+.+..++..+|+.+|..+|| ..||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999965 999999998531 23456889999999999999998 3699999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+|+-|||+||||.|+|||.-..++...+...+ ++.|+++|||.++.++. +||++++++|||+.+|+-++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998876 47899999999998854 999999999999999999999876
No 166
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=395.61 Aligned_cols=217 Identities=30% Similarity=0.521 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|+.....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742223599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCCcccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+||+|+| .++..|++|||.++.. ..+ ++.+.++++..++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 3667899999987632 123 244677778888876655433 57999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||||++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999988999999999999999999998765
No 167
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=7.1e-39 Score=381.84 Aligned_cols=468 Identities=15% Similarity=0.114 Sum_probs=342.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHH------HHHHHHHHHHHHHHHHH
Q 000687 151 FYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDV------VYAINTDAVIVQDAISE 224 (1350)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~fd~~~~~G~l------~sr~~~D~~~i~~~~~~ 224 (1350)
.++.+++++..+....+.|+......+.-.-+-+.+.++-+...-.|+. . ..|.+ =.|+..|+...-+....
T Consensus 90 ~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l-~-~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 90 QVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRL-A-QAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHH-H-hcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 3344444444444455555444444443334444455555555533333 2 34322 26899999988887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000687 225 KLGNFIHYLATFVTGFAVGFSAV---------------WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNI 289 (1350)
Q Consensus 225 ~~~~~~~~~~~~~~~~i~~~~~~---------------~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (1350)
....++.++++++.-.+++.-.+ ..+..++++.+++..++..++++.+.++....++..+..-..
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 67777777766655444433111 122333444455555566677888888888888888888888
Q ss_pred HHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHH
Q 000687 290 VEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIA 369 (1350)
Q Consensus 290 ~~e~l~gi~~Ik~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~ 369 (1350)
+...-++...|-.|+.|+.+.++.++......+...+..........+......++.++-+..++-....|.++.|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888999999999999999988777666655544433333322233333333444444445556667789999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC------CCCCCCCCCCc-cCCCCcceEEEEEEEEECCCCCC
Q 000687 370 TMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK------PSIDRNSESGL-ELDSVSGLIELKHVDFSYPSRPE 442 (1350)
Q Consensus 370 ~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~------~~~~~~~~~~~-~~~~~~g~i~~~~v~f~y~~~~~ 442 (1350)
...++......++++...+..+..-++...|+.++.+.- ++......... .....+..|+++|++..-|+.
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 888888877889999999999999999999999986321 11110000000 001114689999999998854
Q ss_pred CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHH
Q 000687 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKE 522 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ 522 (1350)
...|+++||++++|+.+-|.||||||||||+++|+|+++--+|+|..-.. ..+-|+||.|++-.||.||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHH
Confidence 37899999999999999999999999999999999999999999977521 2589999999999999999
Q ss_pred HhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHH
Q 000687 523 NILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSE 600 (1350)
Q Consensus 523 Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~ 600 (1350)
-|+|.+.. .+++++.+++.++++.+++.++.+- ..-...||+|||||||+||.|+++|++++|||+|||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998764 7889999999999999999987432 2244579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000687 601 SEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 601 ~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~ 638 (1350)
++..+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999889999999999998887777665554
No 168
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-43 Score=376.58 Aligned_cols=213 Identities=34% Similarity=0.555 Sum_probs=181.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCe---eCCCCCHHHHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGH---DIKSLKLRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~---~~~~~~~~~~r 503 (1350)
+|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4789999999974 46899999999999999999999999999999999999999999999999 665533 334
Q ss_pred cceEEEcccCcccc-ccHHHHhhcCCCCC----CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 504 QQIGLVSQEPALFA-TTIKENILLGRPDA----DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~~----~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
++||+|+|+..||. .||++||+||.+-. +. .++.+.++.++ ++..-...+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvq-----------L~~la~ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQ-----------LEGLADRYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhc-----------ccchhhcCchhcChHHHHH
Confidence 68999999999995 59999999997311 11 12222333333 3333445678999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
|||||||..+|++||||||+++||++-.+.+..-|+++. -|.|+++|||+.+++.. ||||+||++|+|...|+++|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998874 38999999999998765 999999999999999999999
Q ss_pred Hhcc
Q 000687 652 IAKG 655 (1350)
Q Consensus 652 ~~~~ 655 (1350)
...+
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 8774
No 169
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-42 Score=402.23 Aligned_cols=225 Identities=29% Similarity=0.478 Sum_probs=188.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++
T Consensus 5 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 79 (351)
T PRK11432 5 NFVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRD 79 (351)
T ss_pred cEEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 36999999999963 3589999999999999999999999999999999999999999999999999876643 578
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
||||+|++.+|+. ||+|||.|+... .+.++..+.+ .+.+..+ |+.......+.+|||||||||+|||||+
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v-----~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~ 152 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRV-----KEALELV--DLAGFEDRYVDQISGGQQQRVALARALI 152 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHH-----HHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999975 999999997431 2222222111 1222222 4444556667899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcH
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGV 659 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~ 659 (1350)
.+|++||||||||+||+.++..+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++.+..
T Consensus 153 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~ 232 (351)
T PRK11432 153 LKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRF 232 (351)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchH
Confidence 99999999999999999999999999998853 8999999999999865 99999999999999999999987753333
Q ss_pred HHH
Q 000687 660 YAK 662 (1350)
Q Consensus 660 ~~~ 662 (1350)
..+
T Consensus 233 ~a~ 235 (351)
T PRK11432 233 MAS 235 (351)
T ss_pred HHH
Confidence 333
No 170
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-42 Score=403.40 Aligned_cols=218 Identities=31% Similarity=0.472 Sum_probs=185.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999887654 4789
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|+ .||+|||.|+... .+..+..+. +.+.+..+ |++........+|||||||||+|||||++
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEER-----VAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHH-----HHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999987531 122222111 12222232 45555566677999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999999998753 8999999999998765 9999999999999999999998764
No 171
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-42 Score=384.19 Aligned_cols=217 Identities=35% Similarity=0.550 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r~ 504 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 369999999999999999999999999999999999999999999999999887664 56788
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
.|+||+|++.+|.. |++||+.++.. ..+.++..+.+ .+.+..+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIV-----LEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHH-----HHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999886 99999987632 12222222211 2223333 45445566677899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|+||||||||++||+.++..+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999999999999999999999999999875 38999999999999876 999999999999999999998754
No 172
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-43 Score=396.99 Aligned_cols=221 Identities=34% Similarity=0.596 Sum_probs=198.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+.+|. +..+|+|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 699999999996 35799999999999999999999999999999999999999999999999999999987 5789
Q ss_pred EEEccCCCCCc-ccHHHHhccCCC---CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHE---SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~---~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
++|+|+..||+ .||+||+.||.. ...+ +.+.++++.+++.++-.+.| .+|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 99999999995 699999999864 1232 36788999999988766655 67999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHhhcC
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl~~~ 1310 (1350)
|||..+|++|+||||-|+||.+-...++.-+++.. .|.|.|.|||+-+.. .-+|||+||.+|+|...|+|+|+..+
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~- 227 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER- 227 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC-
Confidence 99999999999999999999999999999998764 389999999999886 55999999999999999999999987
Q ss_pred CCchhHHHH
Q 000687 1311 PDGCYARMI 1319 (1350)
Q Consensus 1311 ~~g~y~~l~ 1319 (1350)
|...|-.-+
T Consensus 228 P~~~fVA~F 236 (352)
T COG3842 228 PATRFVADF 236 (352)
T ss_pred cchHHHHHH
Confidence 676664433
No 173
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=368.42 Aligned_cols=197 Identities=34% Similarity=0.563 Sum_probs=175.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999975 4799999999999999999999999999999999999999999999999998554 4578
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCCC------CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHESA------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~------tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||+|++.||.- |+++|+.++.+.. ..+.+.+.++.+|+.+|-.+.| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 999999999985 9999999886432 2345778888999988877766 579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHH-hhcCEEEEEeC--CEE
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDD--GKV 1297 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~--G~I 1297 (1350)
||+.+|+||+||||.+|||+.|...+|+-+.+.. .++||++|||++++. .-+|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998865 369999999999986 55999999999 555
No 174
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-42 Score=387.35 Aligned_cols=218 Identities=30% Similarity=0.508 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCChHHhh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~l~~lR 1158 (1350)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999964 369999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cccEEEccCCCCCcccHHHHhccCCC--------CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1159 RHMAIVPQEPCLFASTIYENIAYGHE--------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~--------~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+|.+|..|++||+.++.. ...++++.++++..++.+++.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999987521 1122346677777777655433 23456678999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|++++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999999999998877999999999999885 5999999999999999999999865
No 175
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.3e-42 Score=366.41 Aligned_cols=207 Identities=35% Similarity=0.543 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh---HHh-
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSL- 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l---~~l- 1157 (1350)
++++||+..|.... ..++|+++||+|++||.|||+||||||||||+++|.++-.|++|.|.++|.|+..++. ..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997432 2469999999999999999999999999999999999999999999999999999874 334
Q ss_pred hcccEEEccCCCCCcc-cHHHHhccC----CCCC--CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1158 RRHMAIVPQEPCLFAS-TIYENIAYG----HESA--TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~g-TIreNL~~~----~~~~--tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++||+|+|+..|++. |++||+.++ .... ..+.+.+.++..++.+.... ....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~----------~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLK----------KKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhcc----------CCchhcCHHHHHHH
Confidence 4679999999988754 999999842 2111 13344555566666654431 23467999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEee
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE 1299 (1350)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++.. .|+|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999874 3889999999999999999999999999543
No 176
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-42 Score=384.48 Aligned_cols=224 Identities=31% Similarity=0.560 Sum_probs=193.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCCCCcccHHHHhccCCC--CCCHHHHHHHHHHhcch-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1162 AIVPQEPCLFASTIYENIAYGHE--SATESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~~--~~tdeei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
+|+||+|.+|..|++||+.++.. ...++++.+.++..++. ++ ......+||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY-----------ATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH-----------hhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987532 12234455556665553 22 234456899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCCchh
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCY 1315 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y 1315 (1350)
+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++++.. +...|
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~ 227 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN-PQNEV 227 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC-CCcHH
Confidence 999999999999999999999999999864 38999999999999865 999999999999999999999865 34456
Q ss_pred HHHHH
Q 000687 1316 ARMIQ 1320 (1350)
Q Consensus 1316 ~~l~~ 1320 (1350)
.+.+.
T Consensus 228 ~~~~~ 232 (241)
T PRK14250 228 TKLFI 232 (241)
T ss_pred HHHHH
Confidence 55543
No 177
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.5e-42 Score=375.42 Aligned_cols=204 Identities=35% Similarity=0.632 Sum_probs=184.4
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhc
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRR 1159 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~ 1159 (1350)
.+.++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 4679999999999743 236999999999999999999999999999999999999999999999999999888888999
Q ss_pred ccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1160 HMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
+++||||+|.+|++|+++|+.+... .+++++.++++ +......|||||+||++||||++++
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999987543 45555554443 2345678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecCh
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999988778999999999999988999999999999998874
No 178
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=401.68 Aligned_cols=222 Identities=38% Similarity=0.597 Sum_probs=188.7
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
+|+++|++|+|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 478999999997211 346999999999999999999999999999999999999999999999999998876543 4
Q ss_pred hcceEEEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|++||||+|++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAr 153 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIAR 153 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 599999987632 122222211 123334444 6665666777899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||+.+|+||||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 154 aL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 232 (343)
T PRK11153 154 ALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHP 232 (343)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999999998753 8999999999999876 9999999999999999999998653
No 179
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-42 Score=400.82 Aligned_cols=218 Identities=33% Similarity=0.572 Sum_probs=191.4
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
..|+++||+++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. +++
T Consensus 5 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 79 (351)
T PRK11432 5 NFVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRD 79 (351)
T ss_pred cEEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 36999999999963 4689999999999999999999999999999999999999999999999999887653 678
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
++||+|++.||.. |++|||.++.. ..+ ++++.++++..++.++..+. ...||||||||+|||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLA 148 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALA 148 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999999999964 99999998632 122 34566777777776655443 357999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcC
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~ 1310 (1350)
|||+++|+|||||||||+||+.+...+++.|++..+ |+|+|+|||+++.+. -||||+||++|+|++.|+|+++.++
T Consensus 149 RaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~- 227 (351)
T PRK11432 149 RALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ- 227 (351)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-
Confidence 999999999999999999999999999999998754 899999999999985 4999999999999999999999877
Q ss_pred CCchh
Q 000687 1311 PDGCY 1315 (1350)
Q Consensus 1311 ~~g~y 1315 (1350)
|...|
T Consensus 228 p~~~~ 232 (351)
T PRK11432 228 PASRF 232 (351)
T ss_pred CCchH
Confidence 56544
No 180
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.1e-42 Score=401.76 Aligned_cols=215 Identities=33% Similarity=0.532 Sum_probs=182.0
Q ss_pred CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH----hcceEEEcccCccccc
Q 000687 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL----RQQIGLVSQEPALFAT 518 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~ 518 (1350)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|+++|.++..++...+ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999988877 7899999999999975
Q ss_pred -cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccC
Q 000687 519 -TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATS 595 (1350)
Q Consensus 519 -ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts 595 (1350)
||+|||.++... .+.++..+ .+.+.+..+ |++...++.+.+|||||||||+|||||+.+|+|||||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999987432 12222211 112222322 56666777788999999999999999999999999999999
Q ss_pred CcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000687 596 ALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 596 ~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
+||+.+.+.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++.+.....++
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~~ 230 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVEEFI 230 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHHHHh
Confidence 999999999999998874 38999999999998754 9999999999999999999998764344334443
No 181
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5.3e-42 Score=401.16 Aligned_cols=217 Identities=30% Similarity=0.507 Sum_probs=188.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999973 3589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|+ .||+|||.|+... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAE-----RVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999997432 12222211 223444444 66667778888999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999998753 8999999999999765 9999999999999999999998764
No 182
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=401.97 Aligned_cols=223 Identities=34% Similarity=0.570 Sum_probs=188.8
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR 1158 (1350)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998887654 47
Q ss_pred cccEEEccCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++|+||||++.+|. .|++||+.++.. ..+. +++.+.++..++.++.. ....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-----------RYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHH
Confidence 89999999999886 699999986521 1222 23455555555544433 344679999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+++|+||||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 8999999999999875 99999999999999999999987
Q ss_pred cCCCchhHH
Q 000687 1309 NNPDGCYAR 1317 (1350)
Q Consensus 1309 ~~~~g~y~~ 1317 (1350)
. +...+.+
T Consensus 231 ~-~~~~~~~ 238 (343)
T PRK11153 231 H-PKHPLTR 238 (343)
T ss_pred C-CCcHHHH
Confidence 6 3433433
No 183
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-42 Score=400.43 Aligned_cols=219 Identities=30% Similarity=0.536 Sum_probs=192.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|+. +.++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999952 24699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||||++.+|. .|++|||.++.. ..+ .+++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999995 599999998743 122 234667788888877766554 579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcCC
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++..+ |
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~-p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK-P 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC-C
Confidence 99999999999999999999999999999998654 799999999999875 5999999999999999999999887 5
Q ss_pred CchhH
Q 000687 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|.
T Consensus 227 ~~~~~ 231 (356)
T PRK11650 227 ASTFV 231 (356)
T ss_pred ccHHH
Confidence 55554
No 184
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-42 Score=392.36 Aligned_cols=218 Identities=29% Similarity=0.532 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC--hHHhh
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--LKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--l~~lR 1158 (1350)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cccEEEccCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1159 RHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++||||+| .+|+.|++|||.++.. ..++++ +.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987532 234433 45555555553 01223445578999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|||+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 899999999999985 59999999999999999999987
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 54
No 185
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-42 Score=389.50 Aligned_cols=221 Identities=33% Similarity=0.526 Sum_probs=186.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 58999999999742224599999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 507 GLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+|. ++..||+|||.++... .+.++..+.+ .+.+..+ |++........+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERV-----NEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHH-----HHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 5567999999987432 2222221111 1222222 4444555666799999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999998853 8999999999999877999999999999999999988754
No 186
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=383.11 Aligned_cols=218 Identities=29% Similarity=0.493 Sum_probs=186.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCcEEEECCeeCCCCCHHHHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD---PTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999973 369999999999999999999999999999999999985 6999999999999888877888
Q ss_pred cceEEEcccCccccccHHHHhhcCCCCC----C----HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 504 QQIGLVSQEPALFATTIKENILLGRPDA----D----LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~----~----~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
++++|+||++.+|+.|++||+.++.... . .+++.++++..++.+++ .+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHH
Confidence 9999999999999999999998763210 0 11222333333332221 2345667789999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|||||+++|++|||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988779999999999998865 999999999999999999998764
No 187
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.1e-42 Score=381.46 Aligned_cols=210 Identities=38% Similarity=0.612 Sum_probs=178.4
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCC-----CCCCcEEEECCeeCCCCC--HH
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY-----DPTSGQVLLDGHDIKSLK--LR 500 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~i~g~~~~~~~--~~ 500 (1350)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 478999999964 36999999999999999999999999999999999999 999999999999988776 56
Q ss_pred HHhcceEEEcccCccccccHHHHhhcCCCCC---CH----HHHHHHHHHHchHHHHhcCCCCccccccCC--CCCCChhH
Q 000687 501 WLRQQIGLVSQEPALFATTIKENILLGRPDA---DL----NEIEEAARVANAYSFIIKLPDGFDTQVGER--GVQLSGGQ 571 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~--g~~LSgGq 571 (1350)
.+|++++|++|++.+|..|++||+.++.... .. +++.++++.. |++...... +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA-----------ALWDEVKDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc-----------CCChHHhccCCcccCCHHH
Confidence 6788999999999999779999998753211 11 1222233322 443333333 57899999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+.+|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999999988655999999999999865 99999999999999998765
Q ss_pred H
Q 000687 651 L 651 (1350)
Q Consensus 651 l 651 (1350)
+
T Consensus 227 ~ 227 (227)
T cd03260 227 I 227 (227)
T ss_pred C
Confidence 3
No 188
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=6e-42 Score=400.70 Aligned_cols=218 Identities=29% Similarity=0.506 Sum_probs=189.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999964 3589999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEccCCCCCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||+|++.+|. .|++|||.++... .+ ++.+.++++..++.++.. ....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHHH
Confidence 99999999996 6999999986421 22 234556666666655443 445689999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcCC
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||+.+.+.+++.|++..+ |.|+|+|||+++.+. -||||+||++|++++.|+|+++.++ |
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~-p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH-P 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998653 799999999999975 5999999999999999999999986 5
Q ss_pred CchhH
Q 000687 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|.
T Consensus 227 ~~~~~ 231 (353)
T TIGR03265 227 ATPFV 231 (353)
T ss_pred CCHHH
Confidence 65553
No 189
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=390.73 Aligned_cols=221 Identities=28% Similarity=0.493 Sum_probs=185.3
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----CCHH
Q 000687 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----LKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~~~~ 500 (1350)
+|+++||+|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++.. ....
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 489999999997321 1259999999999999999999999999999999999999999999999999863 3456
Q ss_pred HHhcceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHH
Q 000687 501 WLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri 575 (1350)
.+|+++|||+|+| .+|..|+.||+.|+... .+.++..+. +.+.+..+ |+. ......+.+||||||||+
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrv 153 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKI-----AAEKLEMV--GLADEFWEKSPFELSGGQMRRV 153 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhccCCcccCCHHHHHHH
Confidence 7888999999998 78889999999987432 222222211 12223333 443 345677789999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHh
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 154 aiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 154 AIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999999999999998875 4899999999999885 499999999999999999999875
Q ss_pred c
Q 000687 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 234 ~ 234 (288)
T PRK13643 234 E 234 (288)
T ss_pred C
Confidence 3
No 190
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-42 Score=388.48 Aligned_cols=213 Identities=32% Similarity=0.536 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999632 3699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCC--CCCcccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+||||+| .+|..|+++|+.++.. ..+ ++++.++++..++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987532 122 245677778888876655544 47999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHh
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|||+.+|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999874 4899999999999985 59999999999999999997653
No 191
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=388.80 Aligned_cols=220 Identities=31% Similarity=0.542 Sum_probs=185.5
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--HHHHh
Q 000687 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK--LRWLR 503 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~--~~~~r 503 (1350)
|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 89999999997421 136999999999999999999999999999999999999999999999999997653 45678
Q ss_pred cceEEEcccC--ccccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCcc--ccccCCCCCCChhHHHHHHH
Q 000687 504 QQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD--TQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~--~lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~v~~~g~~LSgGqkqri~i 577 (1350)
++||||||+| .+|+.|++|||.++.. ..+.++..+.+ .+.+..+ |+. +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRV-----KRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHH-----HHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788899999998642 12333332221 1222332 443 45667788999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998753 899999999999985 5999999999999999999998653
No 192
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-41 Score=398.77 Aligned_cols=214 Identities=35% Similarity=0.553 Sum_probs=185.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 36999999999963 3599999999999999999999999999999999999999999999999999877654 468
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC--CCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD--ADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
||||+|++.||+. ||+|||.|+... .+..+ +.++++.. |++........+|||||||||+||
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~p~~LSgGq~QRVaLA 156 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMV-----------QLEEFAQRKPHQLSGGQQQRVAIA 156 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHHHHHH
Confidence 9999999999965 999999987531 12222 22333333 455555566679999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
|||+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++
T Consensus 157 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 157 RAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999999999999998753 8999999999999765 9999999999999999999998874
No 193
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.7e-42 Score=398.51 Aligned_cols=207 Identities=31% Similarity=0.534 Sum_probs=182.5
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh----hcccEEEccCCCCCc-
Q 000687 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RRHMAIVPQEPCLFA- 1172 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l----R~~i~~VpQdp~LF~- 1172 (1350)
.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.|+...+...+ |++++||||++.||+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 468999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000687 1173 STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLD 1246 (1350)
Q Consensus 1173 gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLD 1246 (1350)
.|++|||.++.+ ..+ .+++.++++.+++.++..+. ..+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~-----------p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRY-----------PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 122 34566777777776665444 4579999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHhhcCCCchhH
Q 000687 1247 EATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYA 1316 (1350)
Q Consensus 1247 EaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~ 1316 (1350)
||||+||+.+.+.+++.+.+.. .++|+|+|||+++.+ ..||||++|++|++++.|+|++++++ +...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~-p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN-PANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC-cccHHH
Confidence 9999999999999999998864 389999999999986 55999999999999999999999976 444443
No 194
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=9.6e-42 Score=381.74 Aligned_cols=222 Identities=33% Similarity=0.522 Sum_probs=187.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcce
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~i 506 (1350)
++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 359999999999999999999999999999999999999999999999999988776544 5779
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCCHHHH-------HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDADLNEI-------EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
+|+||++.+|.+ |++||+.++........+ ........+.+.+..+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999886 999999886432110000 0001111234455555 777777788889999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999998875 68999999999999876 999999999999999999988643
No 195
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-41 Score=383.15 Aligned_cols=224 Identities=29% Similarity=0.491 Sum_probs=190.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~l 1154 (1350)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3699999999999999999999999999999999999997 48999999999853 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCC---CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES---AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~---~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|++|||.++... .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999875311 11 34456667776664433 223444 4568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999855 999999999999999999999
Q ss_pred hhcCCCchhH
Q 000687 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
.++ +...|.
T Consensus 237 ~~~-~~~~~~ 245 (254)
T PRK14273 237 FFN-PKNTKT 245 (254)
T ss_pred HhC-CCChHH
Confidence 865 344443
No 196
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=390.00 Aligned_cols=216 Identities=25% Similarity=0.500 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----CChHH
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----YNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~l~~ 1156 (1350)
|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997431 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcccEEEccCC--CCCcccHHHHhccCCCC--CCHH----HHHHHHHHhcch-HHHhcCCCCccccccCCCCCCChhHH
Q 000687 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHES--ATES----EIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~~--~tde----ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
+|++++||+|+| .+|..|+.+|+.++... .+.+ ++.++++..++. ++ ......+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF-----------WEKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh-----------ccCCcccCCHHHH
Confidence 899999999998 78999999999876321 2333 344555555553 22 2344568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998864 4899999999999885 599999999999999999999
Q ss_pred Hhhc
Q 000687 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8754
No 197
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.3e-42 Score=383.21 Aligned_cols=217 Identities=28% Similarity=0.516 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh-hccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l-R~~i 1161 (1350)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 369999999999999999999999999999999999999999999999999988876654 5779
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCCCC------------HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHESAT------------ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~t------------deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|+||+|.+|.+ |++||+.++..... .++.. ..++++++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-----ERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-----HHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 99999987532110 11111 1123344443 4554455666789999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|++|||||+.+|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999865 68999999999999866 999999999999999999998
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 754
No 198
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-41 Score=381.66 Aligned_cols=222 Identities=31% Similarity=0.536 Sum_probs=189.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCCC--ChH
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRKY--NLK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~i--~l~ 1155 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HhhcccEEEccCCCCCcccHHHHhccCCC--C-CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE--S-AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++||||++.+|..|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 12 234566677777763331 1223445689999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767999999999998865 9999999999999999999998
Q ss_pred hcCCCchh
Q 000687 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.. +...+
T Consensus 232 ~~-~~~~~ 238 (247)
T TIGR00972 232 TN-PKEKR 238 (247)
T ss_pred hC-CCChH
Confidence 65 34443
No 199
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=384.01 Aligned_cols=218 Identities=31% Similarity=0.535 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 369999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||++.+|..|++||+.++.. .. .++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 11 23456677777777554322 23455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+++|||++||+++.+. .||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999985 4999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 865
No 200
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-41 Score=383.18 Aligned_cols=220 Identities=28% Similarity=0.523 Sum_probs=190.8
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--C
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--Y 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i 1152 (1350)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 467999999999964 369999999999999999999999999999999999986 589999999999853 4
Q ss_pred ChHHhhcccEEEccCCCCCcccHHHHhccCCC---CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChh
Q 000687 1153 NLKSLRRHMAIVPQEPCLFASTIYENIAYGHE---SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
+...+|++++|+||+|.+|..|+++|+.++.. ..+ +++++++++..++.+.+. ....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56778999999999999999999999986532 122 244667777777644332 2344566789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChh
Q 000687 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999998877889999999999985 49999999999999999999
Q ss_pred HHhhc
Q 000687 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
+++..
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99865
No 201
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=378.10 Aligned_cols=216 Identities=35% Similarity=0.579 Sum_probs=186.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999887777888899
Q ss_pred EEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+.|++||+.++.......+ . .+.+.+..+ |++ ......+.+||||||||++||||++++|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-~------~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-V------DVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-H------HHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999998999999987643211110 1 112233333 443 2345677899999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999875 38999999999999875 999999999999999999998865
No 202
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=381.40 Aligned_cols=211 Identities=30% Similarity=0.533 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999964 369999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEccCCCCCc-ccHHHHhccCCCC--C----C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHES--A----T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~----t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
||||+|.+|. .|++||+.++... . + ++++.++++..++.++.. ....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLAD-----------RYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhh-----------cChhhCCHHHHHHHH
Confidence 9999999886 5999999875321 1 1 123445555555544433 334679999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+.+|++|||||||++||+++.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998754 99999999999999999999986
Q ss_pred c
Q 000687 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 5
No 203
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=386.70 Aligned_cols=217 Identities=29% Similarity=0.480 Sum_probs=190.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+|+||+| .++..|+.|||.++.. ..++++ +.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4778899999986522 233333 4566677777665443 3457999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 8999999999999988999999999999999999999865
No 204
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2e-41 Score=396.50 Aligned_cols=219 Identities=29% Similarity=0.469 Sum_probs=187.9
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC--cEEEECCeeCCCCCHHHH
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS--GQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~i~g~~~~~~~~~~~ 502 (1350)
.|.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 367999999999963 359999999999999999999999999999999999999999 999999999987665 3
Q ss_pred hcceEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
++.||||+|++.+|.. ||+|||.|+... .+.++..+. +.+.++.+ |++........+|||||||||+|||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~-----v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAER-----VADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5789999999999976 999999987431 222222211 12233333 6666667778899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC---CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI---GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999988753 7899999999999765 9999999999999999999998764
No 205
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=389.97 Aligned_cols=220 Identities=27% Similarity=0.513 Sum_probs=186.0
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----ChHH
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~l~~ 1156 (1350)
|+++||+++|+..+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997432 23699999999999999999999999999999999999999999999999999653 3467
Q ss_pred hhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHHHHHHHHHhcchHHHhcCCCCccc-cccCCCCCCChhHHHHHH
Q 000687 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKT-FVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdeei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQrla 1231 (1350)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987632 2343333221 12333333 5553 234567889999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+. .||||++|++|+|++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999864 4899999999999985 589999999999999999999886
Q ss_pred c
Q 000687 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 5
No 206
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=387.31 Aligned_cols=216 Identities=30% Similarity=0.546 Sum_probs=191.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 38999999999643 24699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+|+||+| .++..|++|||.++.. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4677899999987532 1232 34666777777777666544 47999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+.+|+||||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998763 7999999999999988999999999999999999998764
No 207
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=381.45 Aligned_cols=212 Identities=35% Similarity=0.551 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---hHHhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~---l~~lR~ 1159 (1350)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999641 46999999999999999999999999999999999999999999999999998876 567888
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCCh
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+++|+||++.+|. .|+++|+.++... ..++++.++++..++.+. ....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDK-----------AYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhh-----------hCCCcccCCH
Confidence 9999999998886 6999999864211 112334455555555433 3445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeec
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~G 1301 (1350)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3899999999999997 59999999999999999
Q ss_pred ChhHHh
Q 000687 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 999874
No 208
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-41 Score=376.55 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEccCCCCC-cccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLF-ASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF-~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+| ..|+++|+.++.. ..+. +++.++++..++.+.. + ....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------N----KRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------h----ChhhhCCHHHHHHHHHHHH
Confidence 999999988 5799999986421 1122 3355556666554433 2 2335799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999988778999999999999865 999999999999999999876
No 209
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=395.68 Aligned_cols=217 Identities=33% Similarity=0.519 Sum_probs=185.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 4899999999963 359999999999999999999999999999999999999999999999999977654 35789
Q ss_pred EEEcccCccccc-cHHHHhhcCCCC------CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
+||+|++.+|+. |++|||.|+... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999987431 12222211 112233333 5555556677899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||+.+|++||||||||+||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p 228 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREP 228 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999998753 7899999999999765 9999999999999999999998764
No 210
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.9e-41 Score=399.88 Aligned_cols=222 Identities=25% Similarity=0.492 Sum_probs=196.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++..++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCC-CcccHHHHhccCCCC----------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1162 AIVPQEPCL-FASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~L-F~gTIreNL~~~~~~----------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||||++.+ |+.|++||+.++... ...+.+.++++.+++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 678999999876421 123457888888888776543 2457999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHhh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
+|||||+++|+||||||||++||+.+...+++.|+++. +|+|+|+++|+++.+ +.||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 588999999999999 4599999999999999999999985
Q ss_pred cCCCchhHHHHH
Q 000687 1309 NNPDGCYARMIQ 1320 (1350)
Q Consensus 1309 ~~~~g~y~~l~~ 1320 (1350)
. ....+++.
T Consensus 229 ~---~~l~~~~~ 237 (402)
T PRK09536 229 A---DTLRAAFD 237 (402)
T ss_pred c---HHHHHHhC
Confidence 4 44555553
No 211
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=387.68 Aligned_cols=220 Identities=32% Similarity=0.564 Sum_probs=187.5
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHH
Q 000687 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~ 501 (1350)
|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996322 13699999999999999999999999999999999999999999999999998653 3457
Q ss_pred HhcceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccc-cccCCCCCCChhHHHHHH
Q 000687 502 LRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT-QVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~v~~~g~~LSgGqkqri~ 576 (1350)
+|++||||||+| .+|..|+.|||.++... .+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999998 68888999999987422 232332221 23344444 7763 456778999999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHh
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|+|++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999986 499999999999999999998876
Q ss_pred c
Q 000687 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 212
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=381.26 Aligned_cols=220 Identities=30% Similarity=0.508 Sum_probs=185.0
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 47999999999963 3599999999999999999999999999999999999997 48999999998853 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC---CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...+|++++|++|++.+|+.|++|||.++.... +. +.+.++++..++.+.+ .......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-------KDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-------HHHHhCCcccCCHHH
Confidence 456788999999999999899999998864211 11 2233333333332211 223345677999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999999
Q ss_pred HHhcc
Q 000687 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+..++
T Consensus 236 ~~~~~ 240 (254)
T PRK14273 236 LFFNP 240 (254)
T ss_pred HHhCC
Confidence 98653
No 213
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-41 Score=378.83 Aligned_cols=216 Identities=34% Similarity=0.526 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNV 76 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccce
Confidence 3889999999964 369999999999999999999999999999999999999999999999999876543 25789
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCCC------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
+||+|+|.+|. .|++||+.++.... +..+..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~ 149 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRA-----KVHELLKLV--QLDWLADRYPAQLSGGQRQRVALAR 149 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 99999999886 59999998864211 1111111 122334444 5555566677899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||+.+|++|||||||++||+++.+.+.+.|.++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 150 ALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 7999999999998765 999999999999999999998764
No 214
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-41 Score=380.77 Aligned_cols=220 Identities=31% Similarity=0.555 Sum_probs=187.1
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 467999999999963 369999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhhcCCC---CCCHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRP---DADLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
+...+|++|+|++|++.+|+.|++||+.++.. ..+.+ ++.++++..++. .++.+..++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALW-------NEVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCC-------hhhHHHHhcCCCCCCHH
Confidence 55678889999999999999999999987632 12222 223333333322 12234566778899999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+.+|+||||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000687 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 98765
No 215
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-40 Score=377.59 Aligned_cols=220 Identities=26% Similarity=0.457 Sum_probs=196.8
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhh
Q 000687 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR 1158 (1350)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999952 3599999999999999999999999999999999999999999999998
Q ss_pred cccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
+++|+||++.+|++|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 4999999999999999999987643 34455677788889999999999999999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHH-HHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhcCCCchhHH
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEAL-DRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYAR 1317 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L-~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~ 1317 (1350)
+|+||||||||++||+.+...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|.+
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~ 254 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL--RPDFSS 254 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc--chHHHH
Confidence 99999999999999999999888754 555668999999999999999999999999999999999999865 345654
Q ss_pred HH
Q 000687 1318 MI 1319 (1350)
Q Consensus 1318 l~ 1319 (1350)
.+
T Consensus 255 ~~ 256 (282)
T cd03291 255 KL 256 (282)
T ss_pred HH
Confidence 44
No 216
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=377.91 Aligned_cols=216 Identities=33% Similarity=0.548 Sum_probs=184.9
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR 1158 (1350)
|+++|++++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cccEEEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.++... ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 112 2345566666666554433 34679999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||++++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 38999999999999865 99999999999999999999875
Q ss_pred c
Q 000687 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 217
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.1e-41 Score=375.82 Aligned_cols=203 Identities=31% Similarity=0.562 Sum_probs=175.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR~ 1159 (1350)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23699999999999999999999999999999999999999999999999999776543 4788
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCC--C----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHE--S----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~--~----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+++|+||+|.+|. .|++||+.++.. . ..++++.++++..++.++....| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 599999986421 1 12345677777777766554433 4799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEE
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~I 1297 (1350)
||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 48999999999999875 899999999985
No 218
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=384.36 Aligned_cols=212 Identities=32% Similarity=0.571 Sum_probs=182.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|++ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+...++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999963 23599999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEcccC--ccccccHHHHhhcCCCC--CCHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 507 GLVSQEP--ALFATTIKENILLGRPD--ADLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
|||+|+| .++..|++||+.++... .+.+ ++.++++.. |+.........+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAV-----------RMWDFRDKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC-----------CCHHHhcCChhhCCHHHHHHHHHH
Confidence 9999998 57788999999986321 2221 222333333 444344555678999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHH
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l 651 (1350)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999999875 4899999999999985 4999999999999999998654
No 219
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=395.58 Aligned_cols=217 Identities=28% Similarity=0.515 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999964 369999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEccCCCCCc-ccHHHHhccCCC------CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHE------SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~------~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||||++.+|. .|++||+.++.. ..+ ++++.++++..++.++..+ ....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 99999999997 599999998632 112 2345566777776655443 3457999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||+++|++||||||||+||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||||++|++|+|++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998754 7899999999999755 9999999999999999999998
Q ss_pred hcCCCchh
Q 000687 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.+ |...|
T Consensus 226 ~~-p~~~~ 232 (353)
T PRK10851 226 RE-PATRF 232 (353)
T ss_pred hC-ccchH
Confidence 76 55544
No 220
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=382.53 Aligned_cols=218 Identities=29% Similarity=0.453 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC--CCCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR--KYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~i~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3699999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHhhcccEEEccCCCCCcc-cHHHHhccCCC--C--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChh
Q 000687 1155 KSLRRHMAIVPQEPCLFAS-TIYENIAYGHE--S--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
..+|++++|+||+|.+|.+ |++||+.++.. . .+ ++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 11 234556666666544332 1234456789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChh
Q 000687 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000687 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++++.
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 99865
No 221
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.9e-41 Score=379.05 Aligned_cols=218 Identities=32% Similarity=0.538 Sum_probs=184.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~~--~~ 499 (1350)
+|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 3789999999973 35999999999999999999999999999999999999998 99999999998753 45
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC---CCHHHHHHHHHHHchHHHHhcCCCCcc----ccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFD----TQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~v~~~g~~LSgGqk 572 (1350)
..+|++++|+||++.+|+.|++||+.++... .+.++..+. +.+.+..+ |+. ......+.+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEI-----VEESLKKA--ALWDEVKDRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHc--CCCcchhhHhhCCcccCCHHHH
Confidence 5678899999999999999999999875321 111221111 12222222 333 445667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767999999999998865 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 764
No 222
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-41 Score=381.31 Aligned_cols=218 Identities=31% Similarity=0.550 Sum_probs=184.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 359999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC--C-C----HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-D----LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~----~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|++++|++|++.+|+.|++||+.++... . . .+++.++++..++.+. +.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHH
Confidence 5778899999999999989999999876311 1 1 1223333333333221 12345667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 765
No 223
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3.9e-41 Score=367.80 Aligned_cols=200 Identities=36% Similarity=0.563 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCC--CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1083 VELKHVDFSYPSRPD--IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~--~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
|+++||+++|++..+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999975311 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
|+|+||+|.+|++|++||+.++.. .++++.+++++.+++.+++..+|.|+++.+++.+.+||+|||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 4566788888899999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHH-HHHHhc-CCceEEEEccCchHHhhcCEEEEEeCCE
Q 000687 1241 EIMLLDEATSALDAESERSVQE-ALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGK 1296 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~-~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~G~ 1296 (1350)
+++||||||++||+++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566553 4799999999999998899999999985
No 224
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.5e-41 Score=380.09 Aligned_cols=212 Identities=31% Similarity=0.517 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh---HHhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l---~~lR~ 1159 (1350)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 45788
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCCh
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+++||||++.+|. .|+++|+.++... ..++++.++++..++.++ ......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 9999999998886 6999999865321 112234555555555443 3345568999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeec
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~G 1301 (1350)
|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 3799999999999985 49999999999999999
Q ss_pred ChhHHh
Q 000687 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 225
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.4e-41 Score=395.87 Aligned_cols=219 Identities=31% Similarity=0.536 Sum_probs=190.7
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc--cEEEECCccCCCCChHHh
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS--GRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~--G~I~idG~di~~i~l~~l 1157 (1350)
.|.|+++||+++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 367999999999964 369999999999999999999999999999999999999999 999999999987665 3
Q ss_pred hcccEEEccCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1158 RRHMAIVPQEPCLFAS-TIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~g-TIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+++|+||+|++.||.. |++|||.++.. ..+. +++.++++..++.++..+.| .+||||||||+
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHH
Confidence 5789999999999965 99999987632 1232 34556677777766554443 57999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC---CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS---GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~---g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||||||+++|++||||||||+||+.+...+++.|++..+ |.|+|+|||+++.+. -||||+||++|++++.|+++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~ 226 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQAL 226 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999999999999988653 789999999999975 4999999999999999999999
Q ss_pred hhcCCCchh
Q 000687 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
..+ |...|
T Consensus 227 ~~~-p~~~~ 234 (362)
T TIGR03258 227 YDA-PADGF 234 (362)
T ss_pred HhC-cCcHH
Confidence 976 55555
No 226
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=386.93 Aligned_cols=220 Identities=32% Similarity=0.552 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----CCHHH
Q 000687 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----LKLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~~~~~ 501 (1350)
|+++|++|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996421 1469999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhcceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHHH
Q 000687 502 LRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri~ 576 (1350)
.|++||||+|+| .+|+.|++|||.++... .+.++..+. +.+.+..+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 68888999999987432 233332221 12223333 554 3345677899999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||+.+|++|||||||++||+.+...+.+.|+++. .|.|+|+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999999885 38999999999999865 99999999999999999998875
Q ss_pred c
Q 000687 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 227
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.4e-41 Score=375.06 Aligned_cols=217 Identities=26% Similarity=0.421 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh-hccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l-R~~i 1161 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 579999999963 369999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
+|+||++.+|.+ |++||+.++.......+..+.+ .++++.++ +++.........||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999998764322111111111 11122111 1223334455679999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 58999999999998755 99999999999999999988763
No 228
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.4e-41 Score=395.02 Aligned_cols=217 Identities=37% Similarity=0.629 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++...+.. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 3689999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||+|++.||.. |++|||.++.. ..+ ++++.++++..++.++..+.| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999998642 122 234667777788877766654 579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcCC
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||..+...+.+.|++..+ |.|+|+|||+++.+. .||+|+||++|+|++.|+|++++.+ |
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~-p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE-P 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998753 899999999999875 5999999999999999999999987 5
Q ss_pred Cchh
Q 000687 1312 DGCY 1315 (1350)
Q Consensus 1312 ~g~y 1315 (1350)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 5555
No 229
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=388.09 Aligned_cols=217 Identities=28% Similarity=0.486 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----CChHH
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----YNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i~l~~ 1156 (1350)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997421 1469999999999999999999999999999999999999999999999999863 34667
Q ss_pred hhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++++||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++.+.+ .......|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 888999999998 6888999999987632 233333 34455555553211 23445689999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|++|||||+.+|++|||||||++||+.+...+.+.|++..+ |.|||+|||+++.+. .||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 899999999999985 599999999999999999999
Q ss_pred Hhhc
Q 000687 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
+++.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 230
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=382.43 Aligned_cols=221 Identities=30% Similarity=0.499 Sum_probs=190.7
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--
Q 000687 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK-- 1151 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~-- 1151 (1350)
..+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++..
T Consensus 16 ~~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 3457999999999963 3699999999999999999999999999999999999975 89999999999865
Q ss_pred CChHHhhcccEEEccCCCCCcccHHHHhccCCC--CC--C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1152 YNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA--T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1152 i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~--t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
.+...+|++++|+||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ......+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 356678899999999999999999999986421 11 1 234567777777755432 12334567899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecC
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt 1302 (1350)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988778899999999999854 89999999999999999
Q ss_pred hhHHhhc
Q 000687 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
+++++..
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14235 246 TEKMFTN 252 (267)
T ss_pred HHHHHhC
Confidence 9999865
No 231
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-41 Score=384.79 Aligned_cols=219 Identities=35% Similarity=0.547 Sum_probs=185.8
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh----hc
Q 000687 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RR 1159 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l----R~ 1159 (1350)
.++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777753 368999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~--~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+++|+||++.+|. .|++||+.++.. .. .++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999986421 11 1344667777777776655543 4799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||||+++|+||||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999874 3799999999999885 4999999999999999999999875
Q ss_pred CCCchhHH
Q 000687 1310 NPDGCYAR 1317 (1350)
Q Consensus 1310 ~~~g~y~~ 1317 (1350)
+...|.+
T Consensus 252 -~~~~~~~ 258 (269)
T cd03294 252 -PANDYVR 258 (269)
T ss_pred -cCcHHHH
Confidence 3444543
No 232
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-41 Score=377.45 Aligned_cols=218 Identities=34% Similarity=0.595 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
++++||+++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999741 45999999999999999999999999999999999999999999999999998887777888999
Q ss_pred EEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccc--cccCCCCCCChhHHHHHHHHHHhc
Q 000687 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT--QVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
|++|++.+|. .|++||+.++... .+.++. ...+.+.+..+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 5999999875321 111111 11223444444 5543 556777899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999875 38999999999998765 999999999999999999988754
No 233
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.3e-41 Score=376.94 Aligned_cols=216 Identities=27% Similarity=0.521 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998776544 45899
Q ss_pred EEccCCCC-CcccHHHHhccCCC--CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1163 IVPQEPCL-FASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1163 ~VpQdp~L-F~gTIreNL~~~~~--~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
|+||++.+ +..|+++|+.++.. ..+.++..+ .+.+++..+ |++........+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56799999986431 122222111 122333332 444445556678999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+||||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999988999999999999999999999875
No 234
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=7e-41 Score=388.77 Aligned_cols=232 Identities=29% Similarity=0.449 Sum_probs=190.1
Q ss_pred ceEEEEEEEEECCCCC----------CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC
Q 000687 426 GLIELKHVDFSYPSRP----------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK 495 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~ 495 (1350)
..|+++|++++|+.+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 3699999999996321 246999999999999999999999999999999999999999999999999998
Q ss_pred CCCHH---HHhcceEEEcccC--cccc-ccHHHHhhcCC----CCCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCC
Q 000687 496 SLKLR---WLRQQIGLVSQEP--ALFA-TTIKENILLGR----PDADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERG 564 (1350)
Q Consensus 496 ~~~~~---~~r~~i~~v~Q~~--~lf~-~ti~~Ni~~g~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g 564 (1350)
+++.. .+|++|+||+|+| .|++ .||.|||.++. +..+.++..+.+ .+.+..+ |++ ......+
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p 159 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYP 159 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCc
Confidence 88754 3678999999998 4774 69999997642 112333332222 1223333 442 3456778
Q ss_pred CCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000687 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGS 641 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~ 641 (1350)
.+|||||||||+|||||+.+|++||+||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGH 239 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999999998853 8999999999999976 99999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHH
Q 000687 642 VSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
|+|.|+.++++.++.+.+.+.++
T Consensus 240 ive~g~~~~i~~~~~~py~~~l~ 262 (331)
T PRK15079 240 AVELGTYDEVYHNPLHPYTKALM 262 (331)
T ss_pred EEEEcCHHHHHcCCCCHHHHHHH
Confidence 99999999998764333333344
No 235
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-41 Score=373.77 Aligned_cols=203 Identities=38% Similarity=0.620 Sum_probs=174.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999976543 577899
Q ss_pred EEccCCCCCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|. .|++||+.++... .+ ++++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNR-----------YPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHHHHHHH
Confidence 9999998885 6999999865321 12 2345556666666554433 345799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|+++|++|||||||++||+.+...+.+.|++.. .|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999864 38999999999998755 9999999999999876
No 236
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-41 Score=385.48 Aligned_cols=215 Identities=26% Similarity=0.491 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC--CCChHHhhc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR--KYNLKSLRR 1159 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~l~~lR~ 1159 (1350)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 345667899
Q ss_pred ccEEEccCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1160 HMAIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp--~LF~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
+++|+||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 999999998 5788999999986432 1233 2345556666665443 3446789999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+||||||||++||+.+...+.+.|++..+ |+|||++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 899999999999986 599999999999999999999986
Q ss_pred c
Q 000687 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 237
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.1e-41 Score=390.76 Aligned_cols=226 Identities=27% Similarity=0.402 Sum_probs=189.8
Q ss_pred cEEEEEEEEECCCCC----------CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC
Q 000687 1082 EVELKHVDFSYPSRP----------DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK 1151 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1151 (1350)
-|+++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996421 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---hhcccEEEccCC--CCC-cccHHHHhccCC----CCCCHHHH----HHHHHHhcchHHHhcCCCCccccccC
Q 000687 1152 YNLKS---LRRHMAIVPQEP--CLF-ASTIYENIAYGH----ESATESEI----IEAARLANADKFISSLPDGYKTFVGE 1217 (1350)
Q Consensus 1152 i~l~~---lR~~i~~VpQdp--~LF-~gTIreNL~~~~----~~~tdeei----~~al~~a~l~~~I~~lp~Gldt~vge 1217 (1350)
++.+. +|++|+||+|+| .|| ..||.+||.++. +..+.++. .++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 87543 678999999999 477 579999986431 12344333 34455555521 11234
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeC
Q 000687 1218 RGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDD 1294 (1350)
Q Consensus 1218 ~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~ 1294 (1350)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ |.|+|+|||+++.+.. ||||+||.+
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998753 8999999999999975 999999999
Q ss_pred CEEeeecChhHHhhcCCCchhHHH
Q 000687 1295 GKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1295 G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
|+|+|.|++++++++ +...|.+.
T Consensus 238 G~ive~g~~~~i~~~-~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHN-PLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcC-CCCHHHHH
Confidence 999999999999976 56667663
No 238
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.7e-41 Score=365.97 Aligned_cols=203 Identities=37% Similarity=0.587 Sum_probs=180.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
+.++++|++++|+.. ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2369999999999999999999999999999999999999999999999999988888888899
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+||+|+|.+|++|++||+.+... .+.+++.++++ +++.+..||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999987542 23333322221 34567899999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~ 648 (1350)
++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999878999999999999988763
No 239
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-41 Score=378.23 Aligned_cols=221 Identities=37% Similarity=0.582 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---HHHHhc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK---LRWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~---~~~~r~ 504 (1350)
++++|++++|++ ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 146999999999999999999999999999999999999999999999999998776 456788
Q ss_pred ceEEEcccCcccc-ccHHHHhhcCCCCCC--HHHH---HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 505 QIGLVSQEPALFA-TTIKENILLGRPDAD--LNEI---EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~~Ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
.++|+||++.+|. .|++||+.++..... ...+ ........+.+.+..+ |+.......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998886 599999987542110 0000 0000111122334444 555566777889999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999874 38999999999999984 9999999999999999988863
No 240
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=386.68 Aligned_cols=221 Identities=27% Similarity=0.483 Sum_probs=184.3
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--------
Q 000687 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS-------- 496 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~-------- 496 (1350)
.|+++|++|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|+++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997432 1359999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHHhcceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCc
Q 000687 497 ----------------LKLRWLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGF 556 (1350)
Q Consensus 497 ----------------~~~~~~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~ 556 (1350)
.+...+|++||||||+| .+|..||+|||.|+... .+.++..+. +.+.+..+ |+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL 154 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GL 154 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CC
Confidence 13456788999999986 67888999999987432 233333221 12223333 55
Q ss_pred c-ccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCE
Q 000687 557 D-TQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADV 633 (1350)
Q Consensus 557 ~-t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~D~ 633 (1350)
+ ...+....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .|||
T Consensus 155 ~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 155 DESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred ChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 4 35667788999999999999999999999999999999999999999999998875 4899999999999875 4999
Q ss_pred EEEEeCCEEEEecChHHHHhc
Q 000687 634 VAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 634 i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++|++|+|++.|+++++...
T Consensus 235 v~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 235 TIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEEECCEEEEECCHHHHhcC
Confidence 999999999999999998754
No 241
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.8e-41 Score=395.70 Aligned_cols=214 Identities=28% Similarity=0.508 Sum_probs=187.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999998888899999
Q ss_pred EEEcccCcc-ccccHHHHhhcCCCCC-------C---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 507 GLVSQEPAL-FATTIKENILLGRPDA-------D---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~~Ni~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
|||+|++.+ |+.|++||+.++.... + .+.+.++++.. |+.........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~v-----------gl~~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERT-----------GVAQFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHH
Confidence 999999987 5679999999875311 1 12233333333 444444556778999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+++|+||||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999885 58999999999999965 99999999999999999999876
Q ss_pred c
Q 000687 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 242
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-41 Score=378.19 Aligned_cols=216 Identities=33% Similarity=0.537 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 36999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999976421 112 223444444444432 012344567899999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+++|++|||||||++||+.+...+.+.|++.. .|+|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999999875 3899999999999875 4999999999999999999999765
No 243
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-41 Score=379.54 Aligned_cols=226 Identities=28% Similarity=0.441 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCCChHH
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~l~~ 1156 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3699999999999999999999999999999999999984 6999999999998888888
Q ss_pred hhcccEEEccCCCCC-cccHHHHhccCCC--C--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1157 LRRHMAIVPQEPCLF-ASTIYENIAYGHE--S--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF-~gTIreNL~~~~~--~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
+|++++|+||+|.+| ..|++||+.++.. . .. ++++.++++..++.+.+.. .++ ....+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLD----APAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhc----CCcccCCHHHH
Confidence 999999999999755 6799999986431 0 01 2456677777776543321 223 34467999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 5999999999999999999999
Q ss_pred hhcCCCchhHHH
Q 000687 1307 LKNNPDGCYARM 1318 (1350)
Q Consensus 1307 l~~~~~g~y~~l 1318 (1350)
.+. +...+.+.
T Consensus 233 ~~~-~~~~~~~~ 243 (250)
T PRK14247 233 FTN-PRHELTEK 243 (250)
T ss_pred HcC-CccHHHHH
Confidence 865 34444433
No 244
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-41 Score=363.71 Aligned_cols=229 Identities=34% Similarity=0.526 Sum_probs=192.4
Q ss_pred eEEEEEEEEECCCCCC---------------------CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000687 427 LIELKHVDFSYPSRPE---------------------VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|-||||||||+++|.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 4889999988864321 1237899999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHh----cceEEEcccCccccc-cHHHHhhcCCCCC--CHH----HHHHHHHHHchHHHHhcCCC
Q 000687 486 QVLLDGHDIKSLKLRWLR----QQIGLVSQEPALFAT-TIKENILLGRPDA--DLN----EIEEAARVANAYSFIIKLPD 554 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r----~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~--~~~----~~~~~~~~~~~~~~i~~l~~ 554 (1350)
+|+++|.|+..++.+.|| +++++|||+..||+- ||.||..||.+-. +.+ ...++++.+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~V----------- 152 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELV----------- 152 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHc-----------
Confidence 999999999999987654 589999999999864 9999999997622 222 223334444
Q ss_pred CccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hc
Q 000687 555 GFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KA 631 (1350)
Q Consensus 555 g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~ 631 (1350)
|++..-...+.+||||+||||.|||||..||+|||+|||+|||||--+...|+.|.++. -+||+++|||+|++.. -.
T Consensus 153 gL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 153 GLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred CchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 44444455567899999999999999999999999999999999999999999998774 3899999999999865 49
Q ss_pred CEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHH
Q 000687 632 DVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 632 D~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~ 666 (1350)
|||..|++|+|+..|||+|++.++.+.+-+.+++.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~~ 267 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVRN 267 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHhc
Confidence 99999999999999999999998755555555543
No 245
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-41 Score=386.49 Aligned_cols=216 Identities=25% Similarity=0.459 Sum_probs=183.7
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC---------
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--------- 1151 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--------- 1151 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997432 1369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CChHHhhcccEEEccCC--CCCcccHHHHhccCCC--CCCHH----HHHHHHHHhcch-HHHhcC
Q 000687 1152 ---------------YNLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATES----EIIEAARLANAD-KFISSL 1207 (1350)
Q Consensus 1152 ---------------i~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tde----ei~~al~~a~l~-~~I~~l 1207 (1350)
.+...+|++|+||||+| .+|..|++|||.++.. ..+.+ ++.++++..++. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 13467889999999987 6888999999987632 23333 345555555553 23
Q ss_pred CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHH-hh
Q 000687 1208 PDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTI-RN 1285 (1350)
Q Consensus 1208 p~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti-~~ 1285 (1350)
......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|||+|||+++.+ ..
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 234456899999999999999999999999999999999999999999998864 489999999999987 45
Q ss_pred cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1286 AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1286 ~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998764
No 246
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.1e-41 Score=373.13 Aligned_cols=216 Identities=33% Similarity=0.511 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcce
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~i 506 (1350)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776554 6789
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|.. |++||+.++.......+..+ +...+.+.+. +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~--~~~~~l~~~~----~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA--RLERVYELFP----RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH--HHHHHHHHHH----hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999886 99999988654221111111 1111222221 2333455667789999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
++|||||||++||+.++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998875 58999999999998866 9999999999999999988775
No 247
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.6e-41 Score=377.96 Aligned_cols=221 Identities=35% Similarity=0.566 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r 503 (1350)
+|+++||+++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 1 ~l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR02315 1 MLEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLR 78 (243)
T ss_pred CeEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHH
Confidence 3789999999962 2369999999999999999999999999999999999999999999999999877654 3467
Q ss_pred cceEEEcccCcccc-ccHHHHhhcCCCCCC--HHHH---HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 504 QQIGLVSQEPALFA-TTIKENILLGRPDAD--LNEI---EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
++++||+|++.+|. .|++||+.++..... .... ........+.+.+..+ |++......+.+||||||||++|
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (243)
T TIGR02315 79 RRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAI 156 (243)
T ss_pred hheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 89999999998886 599999987642110 0000 0000011223334444 56666677788999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 157 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 157 ARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999999874 37999999999999865 999999999999999999886
No 248
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-41 Score=393.45 Aligned_cols=219 Identities=31% Similarity=0.521 Sum_probs=186.7
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQ 504 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~ 504 (1350)
...|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++ .++
T Consensus 17 ~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r 91 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQR 91 (377)
T ss_pred CceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHC
Confidence 446999999999963 359999999999999999999999999999999999999999999999999987664 467
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
.||||+|++.||.. ||+|||.|+... .+..+..+ .+.+.++.+ |+.........+|||||||||+|||||
T Consensus 92 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 92 PINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred CEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 89999999999976 999999987431 12222221 112233333 555556677789999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+.+|++||||||||+||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999998888764 38999999999998765 9999999999999999999998764
No 249
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-41 Score=384.27 Aligned_cols=217 Identities=30% Similarity=0.494 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCC---CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC-hHHh
Q 000687 1082 EVELKHVDFSYPSRP---DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN-LKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~---~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-l~~l 1157 (1350)
-|+++|++++|++.. ++++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997431 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEccCCC--CCcccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1158 RRHMAIVPQEPC--LFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R~~i~~VpQdp~--LF~gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987532 122 345677777778877665543 5799999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHh
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
++|||||+++|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 389999999999999889999999999999999999997
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 65
No 250
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-41 Score=375.51 Aligned_cols=220 Identities=39% Similarity=0.584 Sum_probs=185.3
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~ 502 (1350)
+|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 378999999997421 12699999999999999999999999999999999999999999999999998876543 34
Q ss_pred hcceEEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
++.++|+||++.+|. .|++||+.++... .+..+.. ..+.+.+..+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIAR 153 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 788999999999997 5999999875321 1111111 1223444444 6666666777899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||+.+|++|||||||++||+.+...+.+.|+++. + |+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 154 ALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999875 3 8999999999999875 99999999999999999988764
No 251
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-41 Score=379.99 Aligned_cols=220 Identities=30% Similarity=0.510 Sum_probs=185.9
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--C
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~ 497 (1350)
.+.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 3699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhhcCCC--CC--CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCCh
Q 000687 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRP--DA--DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSG 569 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSg 569 (1350)
+...+|+.++|++|++.+|+.|++||+.++.. .. +. +++.++++..++.++ +.+..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEE-------VKDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCH
Confidence 45677889999999999998899999987531 00 11 122333333333221 12345667789999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778999999999999865 999999999999999999
Q ss_pred HHHHhc
Q 000687 649 DELIAK 654 (1350)
Q Consensus 649 ~~l~~~ 654 (1350)
+++...
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 998754
No 252
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-41 Score=395.44 Aligned_cols=217 Identities=29% Similarity=0.473 Sum_probs=184.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876653 4689
Q ss_pred EEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|.. |++|||.++... .+.++..+ .+.+.+..+ |++........+|||||||||+|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999965 999999987431 12222111 112233333 55555666778999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|+|++.|+++++...+
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p 225 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 225 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999988743 8999999999998865 9999999999999999999998753
No 253
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.7e-41 Score=386.96 Aligned_cols=218 Identities=27% Similarity=0.462 Sum_probs=182.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 46999999999963 46999999999999999999999999999999999999999999999999987654 357889
Q ss_pred eEEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 506 IGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
||||||++.++. .|++||+.+.... .+..+..+.+ .+.+..+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALV-----PPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999886 5999999863221 1222222111 1222222 3333334445689999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999885 48999999999999976 999999999999999999998754
No 254
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.6e-41 Score=378.91 Aligned_cols=213 Identities=29% Similarity=0.495 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---------
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--------- 1153 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------- 1153 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999964 36999999999999999999999999999999999999999999999999987653
Q ss_pred ----hHHhhcccEEEccCCCCCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCC
Q 000687 1154 ----LKSLRRHMAIVPQEPCLFA-STIYENIAYGHE---SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1154 ----l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~---~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
...+|++++|+||++.+|. .|++||+.++.. ... ++++.++++..++.++.. .....
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-----------HMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-----------cChhh
Confidence 2467889999999999885 799999986421 112 234555566666555443 34467
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEe
Q 000687 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVA 1298 (1350)
Q Consensus 1222 LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~Iv 1298 (1350)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+. .||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998653 899999999999985 49999999999999
Q ss_pred eecChhHHhhc
Q 000687 1299 ELGSHSHLLKN 1309 (1350)
Q Consensus 1299 E~Gt~~eLl~~ 1309 (1350)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999865
No 255
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-41 Score=375.35 Aligned_cols=210 Identities=28% Similarity=0.428 Sum_probs=179.1
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---h
Q 000687 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---L 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---l 1157 (1350)
-++++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 146999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cccEEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1158 R-RHMAIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R-~~i~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
| ++++|+||+|.+|.. |++||+.++.. ... ++++.++++..++.++ ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 679999999998875 99999986311 112 2345555565555433 334456799999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEeeecC
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt 1302 (1350)
++||||++.+|+||||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999864 4899999999999999999999999999998775
No 256
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-41 Score=381.00 Aligned_cols=223 Identities=28% Similarity=0.493 Sum_probs=189.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCCCC--hH
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRKYN--LK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i~--l~ 1155 (1350)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 369999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HhhcccEEEccCCCCCcccHHHHhccCCC--C------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE--S------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
.+|++++||||++.+|.+|+++|+.++.. + ..++++.++++..++.+.+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHH
Confidence 67889999999999999999999986411 1 11234566677776654321 233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhcCCCchhH
Q 000687 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
++. +...|.
T Consensus 236 ~~~-~~~~~~ 244 (251)
T PRK14244 236 FKN-PQSSKT 244 (251)
T ss_pred hcC-CCChHH
Confidence 876 455443
No 257
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=381.92 Aligned_cols=216 Identities=31% Similarity=0.555 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 48999999999632 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+|+||+| .++..|++|||.++.. ..+.++ +.++++..++.++..+ ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4567899999987521 123333 4455666666655443 3468999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++++.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 5899999999999988999999999999999999998764
No 258
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-41 Score=381.34 Aligned_cols=218 Identities=28% Similarity=0.456 Sum_probs=185.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~l 1154 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999865 789999999999865 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC---CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE---SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|.+|+++|+.++.. .. .++.+.++++..++.+.+ .........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 577889999999999999999999986421 11 123355566666553222 1223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+. .||||++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998877889999999999875 5999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+.+
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 865
No 259
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.4e-41 Score=372.23 Aligned_cols=215 Identities=28% Similarity=0.504 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++||++.|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999987543 56678899
Q ss_pred EEcccCccc-cccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALF-ATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf-~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+| ..|++||+.++.. ....++..+ .+.+.+..+ |+.........+||||||||++||||++.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 4699999987431 111111111 122333333 444444556678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999998778999999999999875 999999999999999998875
No 260
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-41 Score=395.71 Aligned_cols=217 Identities=30% Similarity=0.511 Sum_probs=187.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999876653 5689
Q ss_pred EEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||||++.+|.. |++||+.++.. ..+ ++++.++++..++.++..+. ..+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~-----------~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRK-----------PKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999964 99999987632 122 23456667777766554433 3579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcCC
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||+.+.+.+.+.|++..+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++... |
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~-p 225 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY-P 225 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998643 889999999999875 4999999999999999999999876 4
Q ss_pred Cchh
Q 000687 1312 DGCY 1315 (1350)
Q Consensus 1312 ~g~y 1315 (1350)
...|
T Consensus 226 ~~~~ 229 (369)
T PRK11000 226 ANRF 229 (369)
T ss_pred ccHH
Confidence 5444
No 261
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-41 Score=379.45 Aligned_cols=223 Identities=29% Similarity=0.493 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
..+|+.++|+||++.+|..|++||+.++.. ..+. +++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 1222 2355566666654322 11223445679999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred hcCCCchh
Q 000687 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.+ +...|
T Consensus 242 ~~-~~~~~ 248 (258)
T PRK14268 242 HN-PREKS 248 (258)
T ss_pred cC-CCCHH
Confidence 65 34444
No 262
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-41 Score=379.18 Aligned_cols=224 Identities=30% Similarity=0.491 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~l 1154 (1350)
.|+++||+|+|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999964 369999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|+.++|++|++.+|+.|++||+.++.. .. .++++.++++..++++.. .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 667889999999999999999999986532 11 123445556666654211 1112345578999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhcCCCchhH
Q 000687 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
... +.-.|.
T Consensus 234 ~~~-~~~~~~ 242 (251)
T PRK14251 234 FIA-PKKQIT 242 (251)
T ss_pred HhC-CCCHHH
Confidence 765 343343
No 263
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=343.35 Aligned_cols=220 Identities=31% Similarity=0.488 Sum_probs=188.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
++++.+++++|++ ...+++||||+++.||++||.|||||||||+++.|..++.|++|+|++||.|.... +...|++|
T Consensus 1 Ml~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~I 77 (245)
T COG4555 1 MLEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKI 77 (245)
T ss_pred CeeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhc
Confidence 4789999999984 34589999999999999999999999999999999999999999999999998664 56678899
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+++-+.-|+.. |++|||.|...-.+.......++.+.+.+ .| +++..+..+..+||-|+||||+|||||++||
T Consensus 78 GVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k---~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 78 GVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSK---RL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred ceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHH---Hh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCC
Confidence 999988888765 99999998644222222222334443333 33 6666667777789999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMI-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++||||||+||..+.+.+.+.+.+++. |++||+.||.++.++. ||+|+++.+|+++..|+.+++.++
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999875 9999999999999985 999999999999999999998764
No 264
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.7e-41 Score=371.62 Aligned_cols=208 Identities=32% Similarity=0.548 Sum_probs=172.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|
T Consensus 1 ~l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 1 MIRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred CeEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHH
Confidence 37899999999642 23699999999999999999999999999999999999999999999999998766543 467
Q ss_pred cceEEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 504 QQIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
++++|++|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |+.........+||||||||++||||
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANE-----RVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999886 4999999875221 11111111 112223333 44444555667899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i 642 (1350)
|+.+|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998874 48999999999999875 999999999975
No 265
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-41 Score=383.00 Aligned_cols=219 Identities=26% Similarity=0.494 Sum_probs=185.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC--CCCHHHHhc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--SLKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--~~~~~~~r~ 504 (1350)
.|+++|++|+|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 6999999999963 246999999999999999999999999999999999999999999999999984 344567888
Q ss_pred ceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 505 QIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
.+||+||+| .+|+.|++||+.++... .+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 56788999999875321 122222111 12222333 55555667788999999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|+||||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998853 899999999999987 4999999999999999999998754
No 266
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-41 Score=369.07 Aligned_cols=203 Identities=28% Similarity=0.475 Sum_probs=178.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-----------KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-----------chhhCCHHHHHHHHHHHH
Confidence 99999999876 99999976311 112 3456677777777655332 235799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||+++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999864 9999999999999875
No 267
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-41 Score=379.62 Aligned_cols=219 Identities=31% Similarity=0.505 Sum_probs=188.2
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 36999999999964 369999999999999999999999999999999999987 689999999999863 56
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCCC--C---CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHES--A---TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~---tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
...+|++++||||+|.+|..|++|||.++... . .++++.++++.+++...+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 67788999999999999999999999875321 1 134456666666654322 22334556789999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeC-----------CE
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDD-----------GK 1296 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~-----------G~ 1296 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 99999999999999999999999999999999999998877899999999999885 5999999996 67
Q ss_pred EeeecChhHHhhc
Q 000687 1297 VAELGSHSHLLKN 1309 (1350)
Q Consensus 1297 IvE~Gt~~eLl~~ 1309 (1350)
++|.|++++++..
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999865
No 268
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-40 Score=372.55 Aligned_cols=217 Identities=31% Similarity=0.520 Sum_probs=185.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++++
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i 76 (236)
T TIGR03864 1 ALEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARL 76 (236)
T ss_pred CEEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhE
Confidence 3789999999963 36999999999999999999999999999999999999999999999999988766544 4589
Q ss_pred EEEcccCccc-cccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALF-ATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf-~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.++ ..|++||+.++... .+.++..+ .+.+.+..+ |++...+..+.+||||||||++|||||++
T Consensus 77 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~ 149 (236)
T TIGR03864 77 GVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLH 149 (236)
T ss_pred EEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999885 57999999875321 12121111 223444444 67666778888999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|+||||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 150 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 150 RPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999999875 48999999999999878999999999999999999988764
No 269
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-41 Score=370.35 Aligned_cols=207 Identities=38% Similarity=0.618 Sum_probs=174.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||||++.+|. .|++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999875321 11111111 122334444 565556667789999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999874 38999999999998865 9999999999998765
No 270
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-41 Score=379.41 Aligned_cols=219 Identities=28% Similarity=0.449 Sum_probs=189.8
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999963 469999999999999999999999999999999999997 579999999999864 34
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|+.++||||++.+|..|++||+.++.. .. + ++++.++++..++.+.+. ...+..+..|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 6678899999999999999999999987532 11 1 234566677777654432 23456677899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999877899999999999985 499999999999999999999
Q ss_pred Hhhc
Q 000687 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
++..
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9865
No 271
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.3e-41 Score=370.45 Aligned_cols=207 Identities=25% Similarity=0.446 Sum_probs=177.4
Q ss_pred EEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1083 VELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
|+++||+++|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 169999999999999999999999999999999999999999999999999875 456778999
Q ss_pred EEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.+.. .....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 112 23455566666665443 3345679999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|++++|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999874 58999999999998865 9999999999998865
No 272
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.2e-40 Score=372.93 Aligned_cols=233 Identities=28% Similarity=0.440 Sum_probs=199.5
Q ss_pred HHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000687 399 AKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIER 478 (1350)
Q Consensus 399 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 478 (1350)
+.+.+++..+++.+. ..+.+...+.|+++|+++.. .++|+|+||+|++||+++|+|+||||||||+++|+|
T Consensus 15 ~~~~~~~~~~~~~~~----~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~G 85 (282)
T cd03291 15 EGFGELLEKAKQENN----DRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILG 85 (282)
T ss_pred HHHHHHHhccccccc----ccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 355666665443221 12223345579999999952 259999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccc
Q 000687 479 FYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 479 ~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t 558 (1350)
+++|++|+|.++| .|+|++|++.+|+.|++||+.++.. ....++.++++.+++.+.+..+|.++++
T Consensus 86 l~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~ 151 (282)
T cd03291 86 ELEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNT 151 (282)
T ss_pred CCCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccc
Confidence 9999999999998 4999999999999999999998643 2334555667777888889999999999
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHH-HHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000687 559 QVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL-DRFMIGRTTLVIAHRLSTIRKADVVAVL 637 (1350)
Q Consensus 559 ~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l-~~~~~~~t~i~itH~l~~~~~~D~i~vl 637 (1350)
.+++.+.+||||||||++|||||+.+|++|||||||++||+++...+.+.+ +.+.+++|+|+|||+++.+..||+|++|
T Consensus 152 ~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l 231 (282)
T cd03291 152 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILIL 231 (282)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999888754 5566689999999999999889999999
Q ss_pred eCCEEEEecChHHHHhc
Q 000687 638 QQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 638 ~~G~i~~~g~~~~l~~~ 654 (1350)
++|++++.|+++++...
T Consensus 232 ~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 232 HEGSSYFYGTFSELQSL 248 (282)
T ss_pred ECCEEEEECCHHHHHhc
Confidence 99999999999998764
No 273
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.77 Aligned_cols=224 Identities=30% Similarity=0.540 Sum_probs=190.0
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1153 (1350)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 56999999999964 3699999999999999999999999999999999999863 69999999999875 45
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 6678999999999999999999999986521 11 1334556666666654332 22344567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998855 99999999999999999999
Q ss_pred HhhcCCCchh
Q 000687 1306 LLKNNPDGCY 1315 (1350)
Q Consensus 1306 Ll~~~~~g~y 1315 (1350)
+... +...+
T Consensus 232 ~~~~-~~~~~ 240 (250)
T PRK14240 232 LFTN-PKDKR 240 (250)
T ss_pred HHhC-CCChH
Confidence 9765 34433
No 274
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=381.54 Aligned_cols=214 Identities=28% Similarity=0.519 Sum_probs=188.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEccCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1163 IVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1163 ~VpQdp--~LF~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
||||+| .+|..|+++|+.++.. ..+. +.+.++++..++.++.... ...||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHH
Confidence 999998 4788899999986431 2232 3456777777776655443 3579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 899999999999985 6999999999999999999999864
No 275
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.6e-41 Score=368.39 Aligned_cols=199 Identities=29% Similarity=0.505 Sum_probs=174.5
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEE
Q 000687 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~ 1163 (1350)
+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999641 469999999999999999999999999999999999999999999999998864 456788999
Q ss_pred EccCC--CCCcccHHHHhccCCCCC--CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1164 VPQEP--CLFASTIYENIAYGHESA--TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1164 VpQdp--~LF~gTIreNL~~~~~~~--tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
+||+| .+|..|++||+.++.+.. .++++.++++..++.++..+.| ..||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998764322 2356778888888876654443 47999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHh-cCCceEEEEccCchHHhh-cCEEEEEeCCEEe
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRA-CSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA 1298 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~-~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~Iv 1298 (1350)
|++|||||||++||+.+.+.+.+.|++. .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987 468999999999999875 9999999999985
No 276
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-41 Score=377.77 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i--~l 1154 (1350)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999964 369999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|+.++||||+|.+|+.|++||+.++.. .. .++++.++++.+++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1234555666666544332 233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998854 999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
++.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 865
No 277
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=381.42 Aligned_cols=217 Identities=30% Similarity=0.516 Sum_probs=191.0
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc---cEEEECCccCCCCChHHh
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS---GRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~---G~I~idG~di~~i~l~~l 1157 (1350)
+.|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999643 2369999999999999999999999999999999999999987 899999999988887788
Q ss_pred hcccEEEccCC--CCCcccHHHHhccCCC--CCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1158 RRHMAIVPQEP--CLFASTIYENIAYGHE--SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
|++++||||+| .++..|++|||.++.. ..+.+ ++.++++..++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 99999999998 4678899999987532 23333 3666777777776655443 6899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHh
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
++|||||+.+|++|||||||++||+.+...+.+.|++..+ |+|||++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 89999999999999889999999999999999999987
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 54
No 278
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=377.69 Aligned_cols=218 Identities=26% Similarity=0.460 Sum_probs=186.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~l 1154 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999964 369999999999999999999999999999999999997 3 58999999999864 455
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCC---CCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES---ATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~---~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|++||+.++... ..++ ++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6788999999999999999999999865211 1222 3445566666654432 223445678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999864 999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+.+
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 865
No 279
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=377.84 Aligned_cols=220 Identities=30% Similarity=0.499 Sum_probs=183.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++|+|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 20 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 36999999999963 369999999999999999999999999999999999864 799999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC---CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...++++++|++|++.+|+.|++||+.++.... .. +.+.++++..++. .++....+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALW-------DEVKDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCC-------cchHHHHhcCcccCCHHH
Confidence 456788999999999999899999998753211 11 1122222222211 112234566778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 249 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQ 249 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998865 99999999999999999999
Q ss_pred HHhcc
Q 000687 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+..+.
T Consensus 250 ~~~~~ 254 (268)
T PRK14248 250 IFTSP 254 (268)
T ss_pred HHhCC
Confidence 87653
No 280
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-41 Score=377.17 Aligned_cols=227 Identities=26% Similarity=0.496 Sum_probs=191.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3699999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--C-C----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--S-A----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|++||+.++.. . . .++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 1 1 1234566677777654332 223456678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999999999998877899999999999875 4999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 000687 1307 LKNNPDGCYARMI 1319 (1350)
Q Consensus 1307 l~~~~~g~y~~l~ 1319 (1350)
.+. +...|.+.+
T Consensus 233 ~~~-~~~~~~~~~ 244 (250)
T PRK14262 233 VER-PKNKLTEEY 244 (250)
T ss_pred HhC-CCChHHHHH
Confidence 865 344455433
No 281
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=392.84 Aligned_cols=231 Identities=34% Similarity=0.508 Sum_probs=187.7
Q ss_pred eEEEEEEEEECCCCC---------------------CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000687 427 LIELKHVDFSYPSRP---------------------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~---------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
.|+++||++.|+..+ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 477777777775422 11379999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHH----hcceEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccc
Q 000687 486 QVLLDGHDIKSLKLRWL----RQQIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t 558 (1350)
+|.++|.++...+...+ |++++||+|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~ 156 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLEN 156 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCh
Confidence 99999999988876543 4689999999999964 999999986321 12122111 112333333 5555
Q ss_pred cccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEE
Q 000687 559 QVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVA 635 (1350)
Q Consensus 559 ~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~ 635 (1350)
.......+||||||||++|||||+.+|+||||||||++||+.+++.+++.|.++. .++|+|+|||+++.+.. ||+|+
T Consensus 157 ~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 157 YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEE
Confidence 5666778999999999999999999999999999999999999999999999874 48999999999999865 99999
Q ss_pred EEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000687 636 VLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 636 vl~~G~i~~~g~~~~l~~~~~~~~~~~l~ 664 (1350)
+|++|+|++.|+++++..++.+...+.++
T Consensus 237 vL~~G~i~~~g~~~~l~~~~~~~~v~~~~ 265 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILNNPANDYVRTFF 265 (400)
T ss_pred EEECCEEEecCCHHHHHhCcccHHHHHHH
Confidence 99999999999999998764333334444
No 282
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.1e-41 Score=370.04 Aligned_cols=212 Identities=27% Similarity=0.473 Sum_probs=178.1
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
+|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...++|++
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~ 79 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRR 79 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhh
Confidence 3789999999974311 269999999999999999999999999999999999999999999999999875 34567889
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
++|++|++.+|.. |++||+.+.... .+.++..+ .+.+.+..+ |++......+.+||||||||++||||++
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 152 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALV 152 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHh
Confidence 9999999999885 999999764321 11222111 112334444 6666667778899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 153 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 153 HDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999875 48999999999998865 9999999999998764
No 283
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.4e-41 Score=380.35 Aligned_cols=224 Identities=25% Similarity=0.438 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR 1158 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999876543 457
Q ss_pred cccEEEccCCCCCcc-cHHHHhccCCC---CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1159 RHMAIVPQEPCLFAS-TIYENIAYGHE---SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~---~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||++.+|.+ |++||+.++.. ..+. +.+.++++..++.+.. .....+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-----------KLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 1222 2334445555544332 233467999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999864 37999999999999865 9999999999999999999998
Q ss_pred hcCCCchhHHHHH
Q 000687 1308 KNNPDGCYARMIQ 1320 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~ 1320 (1350)
+. +...+..++.
T Consensus 233 ~~-~~~~~~~~~~ 244 (269)
T PRK11831 233 AN-PDPRVRQFLD 244 (269)
T ss_pred cC-CcHHHHHHHH
Confidence 75 3445556654
No 284
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=379.37 Aligned_cols=220 Identities=31% Similarity=0.508 Sum_probs=190.3
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--C
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--Y 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i 1152 (1350)
.+.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 446999999999963 3699999999999999999999999999999999999884 89999999999865 4
Q ss_pred ChHHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChh
Q 000687 1153 NLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
+...+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 55678999999999999999999999986421 11 1 234666677777655433 2345566789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChh
Q 000687 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 99999999999999999999999999999999999999999877899999999999986 49999999999999999999
Q ss_pred HHhhc
Q 000687 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99865
No 285
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.91 Aligned_cols=220 Identities=27% Similarity=0.480 Sum_probs=187.9
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCCC--
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRKY-- 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~i-- 1152 (1350)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 467999999999963 369999999999999999999999999999999999986 4 689999999998653
Q ss_pred ChHHhhcccEEEccCCCCCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCCh
Q 000687 1153 NLKSLRRHMAIVPQEPCLFA-STIYENIAYGHE--S-AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~--~-~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+...+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++.. .....+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 45577899999999999987 599999986421 1 11 2345566666666544322 22345678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecCh
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|+|++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999999999999877899999999999985 5999999999999999999
Q ss_pred hHHhhc
Q 000687 1304 SHLLKN 1309 (1350)
Q Consensus 1304 ~eLl~~ 1309 (1350)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 999865
No 286
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=374.02 Aligned_cols=213 Identities=31% Similarity=0.510 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC--ChHHhhcc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY--NLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i--~l~~lR~~ 1160 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3699999999999999999999999999999999999999999999999998764 34577889
Q ss_pred cEEEccCCCCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEPCLFA-STIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~---~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
++|+||++.+|. .|+++|+.++.. ..+.+ ++.++++..++ +.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGL-----------AERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hHHHhcChhhcCHHHHHHHHH
Confidence 999999998886 599999986521 12222 23344444444 333444556899999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||++++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999998865 48999999999999864 999999999999999999999765
No 287
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-41 Score=370.06 Aligned_cols=209 Identities=27% Similarity=0.484 Sum_probs=180.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEccCCCCCcc-cHHHHhccCCC--CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+|.. |+++|+.++.. .. .++++.++++..++.++.... ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 233566677777776654332 35799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-C-CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-S-GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~-g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
++.+|++|||||||++||+.+.+.+.+.|++.. + |+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999865 3 7899999999999865 999999999999999998775
No 288
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=379.46 Aligned_cols=216 Identities=33% Similarity=0.570 Sum_probs=186.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 58999999999642 34699999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEcccC--ccccccHHHHhhcCCCC--CCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 507 GLVSQEP--ALFATTIKENILLGRPD--ADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
+|++|+| .+++.|++|||.++... .+.++ +.++++.. |++..+......||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQV-----------GMEDFLNREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHc-----------CChhhhhCCcccCCHHHHHHHHHH
Confidence 9999998 45677999999886321 12222 22233333 444445556678999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+.+|+||||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998853 8999999999999888999999999999999999988754
No 289
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=376.51 Aligned_cols=219 Identities=32% Similarity=0.521 Sum_probs=185.6
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 47999999999963 359999999999999999999999999999999999987 689999999999863 45
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC--C---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA--D---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
...+|++++||+|++.+|..|++||+.++.... . .+++.++++..++ ..++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHH
Confidence 667888999999999999889999999864311 1 1122223333322 223344556677899999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-----------CE
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQ-----------GS 641 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~-----------G~ 641 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778999999999999865 999999996 67
Q ss_pred EEEecChHHHHhc
Q 000687 642 VSEIGTHDELIAK 654 (1350)
Q Consensus 642 i~~~g~~~~l~~~ 654 (1350)
+++.|+.+++...
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999765
No 290
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.7e-41 Score=373.03 Aligned_cols=216 Identities=30% Similarity=0.479 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcce
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~i 506 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 35999999999999999999999999999999999999999999999999988776554 45689
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC--CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.+|.+ |++||+.++.+.. ..++.. ..+.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 9999998754311 111111 1223445554 67666777888999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 48999999999988765 99999999999999999988764
No 291
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.9e-41 Score=366.73 Aligned_cols=203 Identities=26% Similarity=0.439 Sum_probs=179.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccCCCCC-cccHHHHhccCC--CCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1163 IVPQEPCLF-ASTIYENIAYGH--ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1163 ~VpQdp~LF-~gTIreNL~~~~--~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
||||++.+| ..|++||+.++. ...+++++.++++..++.+...+ ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 579999997652 12356677888888888765443 2457999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 58999999999999865 9999999999999875
No 292
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=379.50 Aligned_cols=214 Identities=29% Similarity=0.538 Sum_probs=185.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC-hHHhhccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN-LKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~-l~~lR~~i 1161 (1350)
++++||+++|+.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|++||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPDG--TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCCC--CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 7899999999632 36999999999999999999999999999999999999999999999999998765 46778899
Q ss_pred EEEccCCC--CCcccHHHHhccCCCC--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEPC--LFASTIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~--LF~gTIreNL~~~~~~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+|+||+|. ++..|+++||.++... .+ ++++.++++..++.++.. .....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHHH
Confidence 99999985 6778999999875321 22 233555566666655443 33467999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+.+|+||||||||++||+.+...+.+.|++.. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 48999999999999988999999999999999999998754
No 293
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=371.19 Aligned_cols=214 Identities=30% Similarity=0.508 Sum_probs=180.7
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
.++++||+|+|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999997422 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-cceEEEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 503 R-QQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r-~~i~~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
| +.++|++|++.+|.. |++||+.++.. ....++..+ .+.+.+..+ |++........+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998875 99999987421 112222111 122334444 666666777889999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~ 647 (1350)
||++.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4899999999999998889999999999998875
No 294
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4e-41 Score=372.02 Aligned_cols=204 Identities=34% Similarity=0.494 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH----h
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS----L 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~----l 1157 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hcccEEEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1158 RRHMAIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++++|+||+|.+|.+ |++||+.++.. ... ++++.++++..++.+. ......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 6789999999999876 99999987532 111 2344555555555443 3344568999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEE
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~I 1297 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 8999999999999988999999999975
No 295
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=377.03 Aligned_cols=217 Identities=30% Similarity=0.500 Sum_probs=185.7
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC-------
Q 000687 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY------- 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i------- 1152 (1350)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (257)
T PRK10619 3 ENKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQL 79 (257)
T ss_pred CccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccc
Confidence 356999999999963 3699999999999999999999999999999999999999999999999988642
Q ss_pred ------ChHHhhcccEEEccCCCCCcc-cHHHHhccCC---CCCC----HHHHHHHHHHhcchHHHhcCCCCccccccCC
Q 000687 1153 ------NLKSLRRHMAIVPQEPCLFAS-TIYENIAYGH---ESAT----ESEIIEAARLANADKFISSLPDGYKTFVGER 1218 (1350)
Q Consensus 1153 ------~l~~lR~~i~~VpQdp~LF~g-TIreNL~~~~---~~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~ 1218 (1350)
....+|++++||||++.+|.. |++||+.++. .... ++++.++++..++.++.. ...
T Consensus 80 ~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~ 149 (257)
T PRK10619 80 KVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKY 149 (257)
T ss_pred ccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCC
Confidence 135678899999999999974 9999997632 1112 234555566655544321 344
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCE
Q 000687 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGK 1296 (1350)
Q Consensus 1219 G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~ 1296 (1350)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 56899999999999999999999999999999999999999999999875 48999999999999986 99999999999
Q ss_pred EeeecChhHHhhc
Q 000687 1297 VAELGSHSHLLKN 1309 (1350)
Q Consensus 1297 IvE~Gt~~eLl~~ 1309 (1350)
+++.|+++++++.
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999999865
No 296
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-41 Score=379.66 Aligned_cols=214 Identities=29% Similarity=0.468 Sum_probs=188.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCCCCcc-cHHHHhccCCC----------CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHE----------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~----------~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+|+||++.+|.+ |+++|+.++.. ...++++.++++.+++.+++...| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 999999876654 99999986521 112345777788888766554432 47999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 3899999999999985 59999999999999999999987
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 237 ~~ 238 (265)
T PRK10575 237 RG 238 (265)
T ss_pred CH
Confidence 43
No 297
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-40 Score=373.30 Aligned_cols=218 Identities=33% Similarity=0.555 Sum_probs=186.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC--CHHHHhc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL--KLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~--~~~~~r~ 504 (1350)
+++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +...+++
T Consensus 1 ~l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (240)
T PRK09493 1 MIEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQ 77 (240)
T ss_pred CEEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhh
Confidence 3789999999963 3699999999999999999999999999999999999999999999999998764 3456788
Q ss_pred ceEEEcccCcccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 505 QIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
+++|++|++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++.........||||||||++||||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~a 150 (240)
T PRK09493 78 EAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARA 150 (240)
T ss_pred ceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHH
Confidence 9999999998886 599999987531 112222211 123444444 66666677788999999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++.+|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 151 LAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999998875 48999999999999865 999999999999999999998765
No 298
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=8.5e-41 Score=385.56 Aligned_cols=214 Identities=24% Similarity=0.441 Sum_probs=183.7
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 36999999999963 46999999999999999999999999999999999999999999999999997754 457899
Q ss_pred cEEEccCCCCCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1161 MAIVPQEPCLFA-STIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
||||||+|.+|. .|++|||.+... ..+..+ +.++++..++. +..++.+ .+||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~----~~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLE-------NKADAKV----GELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-------hHhcCch----hhCCHHHHHHHHHH
Confidence 999999999885 699999985321 123332 33444444433 3345544 46999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|||+.+|++|+|||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999875 48999999999999965 999999999999999999999755
No 299
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-41 Score=376.90 Aligned_cols=218 Identities=29% Similarity=0.500 Sum_probs=186.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc---CCC--CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF---YEP--SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl---~~p--~~G~I~idG~di~~i--~l 1154 (1350)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999964 3699999999999999999999999999999999997 344 589999999998764 34
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|+++|+.++.. .. .+++++++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 677889999999999999999999986421 11 1234556666666644332 223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999985 4999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 865
No 300
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.52 Aligned_cols=218 Identities=30% Similarity=0.472 Sum_probs=183.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC--CCCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK--SLKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~--~~~~ 499 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 5899999999963 3599999999999999999999999999999999999987 4999999999987 4455
Q ss_pred HHHhcceEEEcccCccccc-cHHHHhhcCCC--C--CCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 500 RWLRQQIGLVSQEPALFAT-TIKENILLGRP--D--ADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~--~--~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
..+|++++|++|++.+|.. |++||+.++.. . ...++ +.++++..++.+ .+.......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWD-------EVKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCcc-------chhhhhccChhhCCHH
Confidence 6778899999999999976 99999987531 1 01122 222222222211 1223456677899999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000687 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98764
No 301
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=385.79 Aligned_cols=227 Identities=27% Similarity=0.443 Sum_probs=189.5
Q ss_pred cEEEEEEEEECCCCC-------CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh
Q 000687 1082 EVELKHVDFSYPSRP-------DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l 1154 (1350)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997421 2469999999999999999999999999999999999999999999999999988864
Q ss_pred H---HhhcccEEEccCCC--CCc-ccHHHHhccC---CCCCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCC
Q 000687 1155 K---SLRRHMAIVPQEPC--LFA-STIYENIAYG---HESAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1155 ~---~lR~~i~~VpQdp~--LF~-gTIreNL~~~---~~~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
. .+|++|+||||+|. |+. -|+.+|+... +.... .+++.++++.+++.+ ..++ .....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~----~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYD----RYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhc----CCCcc
Confidence 3 57889999999994 554 4898888532 11122 234566667666642 1222 23467
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEe
Q 000687 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVA 1298 (1350)
Q Consensus 1222 LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~Iv 1298 (1350)
||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ |+|+|+|||+++.+.. ||+|+||.+|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999975 9999999999999
Q ss_pred eecChhHHhhcCCCchhHHHH
Q 000687 1299 ELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1299 E~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|.|++++++++ +...|.+..
T Consensus 235 e~g~~~~~~~~-p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNN-PRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcC-CCCHHHHHH
Confidence 99999999986 566676643
No 302
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=375.91 Aligned_cols=219 Identities=29% Similarity=0.510 Sum_probs=183.6
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--C
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... +
T Consensus 11 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 36999999999963 3599999999999999999999999999999999999985 799999999998653 2
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCC--CCCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
...+|+.++|++|++.+|+.|++||+.++.. ..+.++ +.++++..++.+ ...........+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWD-------ETSDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCChhhCCHHHH
Confidence 3456788999999999999999999987532 112222 222222222211 112344566789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
..+
T Consensus 241 ~~~ 243 (258)
T PRK14268 241 FHN 243 (258)
T ss_pred hcC
Confidence 765
No 303
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.7e-40 Score=374.88 Aligned_cols=218 Identities=33% Similarity=0.519 Sum_probs=185.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--------
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-------- 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-------- 498 (1350)
+++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 5899999999963 35999999999999999999999999999999999999999999999999986532
Q ss_pred HHHHhcceEEEcccCcccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 499 LRWLRQQIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
...+|++++||+|++.+|. .|++||+.++.. ....++..+ .+.+.+..+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3457789999999999886 599999987421 112122111 123344444 66655667788999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998875 48999999999999876 9999999999999999999987
Q ss_pred hc
Q 000687 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 65
No 304
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-40 Score=386.85 Aligned_cols=235 Identities=25% Similarity=0.417 Sum_probs=188.3
Q ss_pred eEEEEEEEEECCCC-CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CcEEEECCeeCCCCCHHHH
Q 000687 427 LIELKHVDFSYPSR-PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT---SGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~i~g~~~~~~~~~~~ 502 (1350)
.++++|++++|+.. ...++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 69999999999642 1246999999999999999999999999999999999999996 9999999999998887655
Q ss_pred h----cceEEEcccC--cccc-ccHHHHhhcCC---CCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 503 R----QQIGLVSQEP--ALFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 503 r----~~i~~v~Q~~--~lf~-~ti~~Ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
+ ++|+||+|+| .++. .|+.+|+.... ...+.++..+.+ ..+.+. ..||++. ..++..+.+||||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~L~~-vgL~~~~-~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEES--VRMLDA-VKMPEAR-KRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHH--HHHHHH-cCCCChH-HHhcCCcccCCHHHH
Confidence 3 4799999998 4554 37888775321 112222222111 111121 2344433 336778899999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|+|.|+++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998854 8999999999999875 9999999999999999999
Q ss_pred HHHhccCCcHHHHHHH
Q 000687 650 ELIAKGENGVYAKLIR 665 (1350)
Q Consensus 650 ~l~~~~~~~~~~~l~~ 665 (1350)
++.+.+.+.+.+.++.
T Consensus 248 ~i~~~p~~pyt~~l~~ 263 (330)
T PRK09473 248 DVFYQPSHPYSIGLLN 263 (330)
T ss_pred HHHhCCCCHHHHHHHH
Confidence 9998754444444443
No 305
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.7e-41 Score=372.63 Aligned_cols=216 Identities=25% Similarity=0.457 Sum_probs=181.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~i 1161 (1350)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877655 35789
Q ss_pred EEEccCCCCCcc-cHHHHhccCCC--CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr 1238 (1350)
+|+||++.+|.+ |++||+.++.+ ....++..+ .+++++..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 99999986532 112221111 122333333 44444455667899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhh
Q 000687 1239 KAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998865 48999999999987754 99999999999999999998864
No 306
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.4e-40 Score=373.67 Aligned_cols=213 Identities=29% Similarity=0.487 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC--------h
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--------L 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~--------l 1154 (1350)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999964 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhcccEEEccCCCCCc-ccHHHHhccCC---CCCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1155 KSLRRHMAIVPQEPCLFA-STIYENIAYGH---ESATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~-gTIreNL~~~~---~~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
..+|++++||||+|.+|. .|++||+.++. .....+ .+.++++..+ ++........+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVG-----------LAGKETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CcchhhCChhhCChHH
Confidence 567889999999999885 69999997641 112222 2333333333 3333345567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChh
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999875 48999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000687 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++.+.
T Consensus 230 ~~~~~ 234 (250)
T PRK11264 230 ALFAD 234 (250)
T ss_pred HHhcC
Confidence 99765
No 307
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=385.35 Aligned_cols=232 Identities=31% Similarity=0.465 Sum_probs=187.7
Q ss_pred eEEEEEEEEECCCCC-------CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH
Q 000687 427 LIELKHVDFSYPSRP-------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~ 499 (1350)
.|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.++|.++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 589999999996321 2469999999999999999999999999999999999999999999999999988765
Q ss_pred H---HHhcceEEEcccCc--ccc-ccHHHHhhcCC---CCCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCCh
Q 000687 500 R---WLRQQIGLVSQEPA--LFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSG 569 (1350)
Q Consensus 500 ~---~~r~~i~~v~Q~~~--lf~-~ti~~Ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSg 569 (1350)
. .+|++|+||+|+|. |+. .||.+|+.... .....++.. ..+.+.+..+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR-----EKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 56789999999993 554 39999986421 111222111 1122333333 443 234566789999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|||||++|||||+.+|++||+||||++||..+...|.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999875 38999999999999975 9999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000687 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l~~ 665 (1350)
+.+++++++.+.+.+.++.
T Consensus 238 ~~~~~~~~p~hpyt~~ll~ 256 (327)
T PRK11308 238 TKEQIFNNPRHPYTQALLS 256 (327)
T ss_pred CHHHHhcCCCCHHHHHHHH
Confidence 9999998654443344443
No 308
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-41 Score=380.38 Aligned_cols=216 Identities=34% Similarity=0.511 Sum_probs=179.4
Q ss_pred EEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH----hc
Q 000687 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL----RQ 504 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~----r~ 504 (1350)
.++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46688888853 358999999999999999999999999999999999999999999999999987765443 46
Q ss_pred ceEEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 505 QIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
+++|++|++.+|. .|++||+.++... ....+..+ .+.+.+..+ |++..+.....+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 8999999999885 5999999875321 11111111 112233333 454445566678999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+.+|+||||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999874 38999999999998865 999999999999999999999865
No 309
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=373.91 Aligned_cols=218 Identities=26% Similarity=0.507 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 36999999999999999999999999999999999999997 6999999999864 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 11 1 223444555556554332 234566778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999876 799999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 765
No 310
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=379.22 Aligned_cols=217 Identities=29% Similarity=0.502 Sum_probs=186.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999743234699999999999999999999999999999999999999999999999999877777788999
Q ss_pred EEEcccCc--cccccHHHHhhcCCC--CCCHHHH----HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 507 GLVSQEPA--LFATTIKENILLGRP--DADLNEI----EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~~Ni~~g~~--~~~~~~~----~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
+||+|+|. ++..|+.|||.++.. ..+.+++ .++++.. |+..........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAV-----------NMLDFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC-----------CCHhHhhCCcccCCHHHHHHHHHH
Confidence 99999983 567899999987632 1222332 2233333 333344556678999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|++++++..
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998853 8999999999999988999999999999999999998754
No 311
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-41 Score=361.39 Aligned_cols=217 Identities=30% Similarity=0.573 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc---cCCCCChHHhh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK---DIRKYNLKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~---di~~i~l~~lR 1158 (1350)
.|+++|++..|+. .++++||||+|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++.+.+ .
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--D 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--h
Confidence 3788899999864 46899999999999999999999999999999999999999999999999 77774443 4
Q ss_pred cccEEEccCCCCC-cccHHHHhccCCC----CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1159 RHMAIVPQEPCLF-ASTIYENIAYGHE----SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF-~gTIreNL~~~~~----~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++||+|+|+..|| ..||++||+||.+ .. ....+.+-++.+++..+-+.-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 6899999999988 5799999999962 11 2334556677777766655444 6899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHH
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
+||||||...|++|+||||.++||+.-.+.+++-|++... |.|++.|||+.+.+ +.||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999988643 88999999999987 55999999999999999999999
Q ss_pred hhcCCCchh
Q 000687 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
... |++.|
T Consensus 226 ~~~-P~s~f 233 (345)
T COG1118 226 YDH-PASRF 233 (345)
T ss_pred hcC-CCccc
Confidence 877 66654
No 312
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.2e-40 Score=374.13 Aligned_cols=212 Identities=24% Similarity=0.404 Sum_probs=183.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~i 1161 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999964 36999999999999999999999999999999999999999999999999998877664 35679
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCCC--------------CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHESA--------------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~--------------tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
+|+||++.+|.+ |++||+.++.... .++++.++++..+ ++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIG-----------LADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcC-----------CchhhcCChhhCCHHH
Confidence 999999999986 9999998753200 1122333344333 4333445567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999965 99999999999999999999
Q ss_pred Hhh
Q 000687 1306 LLK 1308 (1350)
Q Consensus 1306 Ll~ 1308 (1350)
++.
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 874
No 313
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.4e-41 Score=370.39 Aligned_cols=208 Identities=38% Similarity=0.539 Sum_probs=175.1
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH----HH
Q 000687 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR----WL 502 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~----~~ 502 (1350)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999999876643 24
Q ss_pred hcceEEEcccCccccc-cHHHHhhcCCCCC--CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFAT-TIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
+++++|++|++.+|.. |++||+.++.... ...+.. ..+.+.+..+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERR-----ERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHH-----HHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 6789999999999876 9999998864311 111111 1223444444 6666667778899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i 642 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998854 8999999999999878999999999974
No 314
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=373.51 Aligned_cols=218 Identities=31% Similarity=0.483 Sum_probs=184.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHHH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999974 7999999999998888778
Q ss_pred HhcceEEEcccCccc-cccHHHHhhcCCCCC----CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 502 LRQQIGLVSQEPALF-ATTIKENILLGRPDA----DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf-~~ti~~Ni~~g~~~~----~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
+|+.|+|++|++.+| ..|++||+.++.... ... ++.++++..++.+ .++........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWD-------EVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCc-------chhhhhcCCcccCCHHHH
Confidence 889999999999765 569999998763211 111 2223333332211 112334566778999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 765
No 315
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=372.55 Aligned_cols=220 Identities=30% Similarity=0.534 Sum_probs=185.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--C
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 3 PKIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred ceEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 36899999999963 35999999999999999999999999999999999999997 69999999998643 4
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCC--C-CHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...+|+.++||+|++.+|+.|++||+.++... . ..++ +.++++..++. +++.+..+..+.+|||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~Gq 152 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALW-------DEVKDNLHKSGLALSGGQ 152 (251)
T ss_pred hHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCc-------hhhhhHhhCCcccCCHHH
Confidence 55778899999999999989999999876321 1 1111 22222222222 223344667788999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 153 QQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988678999999999999876 89999999999999999999
Q ss_pred HHhcc
Q 000687 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+...+
T Consensus 233 ~~~~~ 237 (251)
T PRK14249 233 IFSRP 237 (251)
T ss_pred HHhCC
Confidence 87653
No 316
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=392.75 Aligned_cols=210 Identities=33% Similarity=0.561 Sum_probs=180.6
Q ss_pred CcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh----hcccEEEccCCCCCc-c
Q 000687 1099 PIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RRHMAIVPQEPCLFA-S 1173 (1350)
Q Consensus 1099 ~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l----R~~i~~VpQdp~LF~-g 1173 (1350)
++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||.|+...+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998876654 468999999999986 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000687 1174 TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDE 1247 (1350)
Q Consensus 1174 TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDE 1247 (1350)
|++||+.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987531 112 245666777777766655443 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcCCCchh-HHHHH
Q 000687 1248 ATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNPDGCY-ARMIQ 1320 (1350)
Q Consensus 1248 aTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y-~~l~~ 1320 (1350)
||++||+.+.+.+++.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|++++++.+ +...| +.++.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~-~~~~~v~~~~~ 266 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN-PANDYVRTFFR 266 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC-cccHHHHHHHh
Confidence 999999999999999999864 4899999999999985 4999999999999999999999876 44444 44444
No 317
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-40 Score=362.08 Aligned_cols=200 Identities=37% Similarity=0.585 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCC--CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 428 IELKHVDFSYPSRPE--VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999974311 3699999999999999999999999999999999999999999999999 5
Q ss_pred eEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+|++|+|.+|+.|++||+.++.. .+.++..++++.+++.+++..+|.|+++.+++++.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998754 3445667778888899999999999999999999999999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHH-HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000687 586 AILLLDEATSALDSESEKLVQE-ALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~ 641 (1350)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 456553 4799999999999998899999999985
No 318
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=377.96 Aligned_cols=216 Identities=29% Similarity=0.452 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 23699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCC--CCcccHHHHhccCCCC--CCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1162 AIVPQEPC--LFASTIYENIAYGHES--ATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~--LF~gTIreNL~~~~~~--~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
+|+||+|. ++..|+++|+.++... ... +++.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHH
Confidence 99999994 4556899999875321 222 34555666666654432 34467999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhhcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||++.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||||++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999999764
No 319
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=378.58 Aligned_cols=219 Identities=27% Similarity=0.522 Sum_probs=187.8
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35899999999964 369999999999999999999999999999999999997 689999999999864 34
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCC-----CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE-----SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-----~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
...+|++++||||++.+|..|++||+.++.. ...+++++++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5678899999999999999999999986421 1123456777777766443321 234456789999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEE-EEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIA-VIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~-Vl~~G~IvE~Gt~~eL 1306 (1350)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999865 99975 5799999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.++
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 765
No 320
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=376.57 Aligned_cols=221 Identities=28% Similarity=0.492 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCCCCcc-cHHHHhccCCCC----------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~----------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++.. .....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLAD-----------RRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHc-----------CCcccCCHHHHHHHH
Confidence 99999998876 999999875210 11234566677777655433 234679999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||||++++|++|||||||++||+++...+.+.|++.. +|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999998865 4899999999999986 4999999999999999999998753
Q ss_pred CCCchhHHHHH
Q 000687 1310 NPDGCYARMIQ 1320 (1350)
Q Consensus 1310 ~~~g~y~~l~~ 1320 (1350)
..+.+.+.
T Consensus 229 ---~~~~~~~~ 236 (255)
T PRK11231 229 ---GLLRTVFD 236 (255)
T ss_pred ---HHHHHHhC
Confidence 34555553
No 321
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1e-40 Score=356.03 Aligned_cols=178 Identities=34% Similarity=0.623 Sum_probs=166.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5799999999753 23699999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 357999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhhcCEEEEEeCCEEeeec
Q 000687 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~G 1301 (1350)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999899999999999999865
No 322
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-40 Score=389.47 Aligned_cols=206 Identities=28% Similarity=0.415 Sum_probs=173.1
Q ss_pred CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCe----eCCCCCHHHH---h-cceEEEcccCc
Q 000687 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGH----DIKSLKLRWL---R-QQIGLVSQEPA 514 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 514 (1350)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 5666665543 3 58999999999
Q ss_pred ccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEe
Q 000687 515 LFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLD 591 (1350)
Q Consensus 515 lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlD 591 (1350)
+|+ .|++||+.++... .+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 1222111 1122333333 5555556667789999999999999999999999999
Q ss_pred cccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 592 EATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 592 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.++
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p 256 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNP 256 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCc
Confidence 99999999999999999998753 8999999999999754 9999999999999999999998763
No 323
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=374.65 Aligned_cols=228 Identities=26% Similarity=0.468 Sum_probs=192.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~l 1154 (1350)
-|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
...|+.++|+||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+.+ .+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEV-------KDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhh-------HHHhhcChhhCCHHHH
Confidence 677889999999999999999999987532 11 1 22345555555554322 2334566778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++||||++.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 999999999999999999999999999999999999998877899999999999996 4999999999999999999999
Q ss_pred hhcCCCchhHHHHH
Q 000687 1307 LKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~ 1320 (1350)
.++ +...+.+.+.
T Consensus 236 ~~~-~~~~~~~~~~ 248 (253)
T PRK14261 236 FEN-PHEELTENYI 248 (253)
T ss_pred HhC-CCcHHHHHHh
Confidence 865 4445555443
No 324
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-40 Score=377.17 Aligned_cols=229 Identities=31% Similarity=0.453 Sum_probs=187.4
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH
Q 000687 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++||+|+|++. .+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 58999999999631 134699999999999999999999999999999999999999999999999999877654
Q ss_pred ---HHhcceEEEcccCc--cc-cccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChh
Q 000687 501 ---WLRQQIGLVSQEPA--LF-ATTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGG 570 (1350)
Q Consensus 501 ---~~r~~i~~v~Q~~~--lf-~~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgG 570 (1350)
.+|+.|+||+|+|. ++ ..|++||+.++.. ....++. ...+.+.+..+ |++ ...+..+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGG 154 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHH
Confidence 36778999999983 44 3699999975421 1111111 11123344444 564 3456778899999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 155 e~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 155 QLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 99999999999999999999999999999999999999998753 8999999999999975 99999999999999999
Q ss_pred hHHHHhccCCcHHHHH
Q 000687 648 HDELIAKGENGVYAKL 663 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l 663 (1350)
++++... .++.++.+
T Consensus 235 ~~~~~~~-~~~~~~~~ 249 (265)
T TIGR02769 235 VAQLLSF-KHPAGRNL 249 (265)
T ss_pred HHHHcCC-CCHHHHHH
Confidence 9999864 24445444
No 325
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-40 Score=377.22 Aligned_cols=219 Identities=30% Similarity=0.531 Sum_probs=185.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-HHHHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-LRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-~~~~r~~ 505 (1350)
+++++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.
T Consensus 1 ml~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (274)
T PRK13644 1 MIRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred CEEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhh
Confidence 3789999999963 235999999999999999999999999999999999999999999999999997765 3567889
Q ss_pred eEEEcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 506 IGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
++||+|+|. ++..|++|||.++... .+.++..+. +.+.+..+ |++......+..||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral 151 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGIL 151 (274)
T ss_pred eEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 999999985 5677999999886421 222222221 12233333 565566677789999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 152 TMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999999978999999999999999999988654
No 326
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=374.68 Aligned_cols=218 Identities=27% Similarity=0.493 Sum_probs=183.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++|++|.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 6999999999963 359999999999999999999999999999999999997 3 59999999999864 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC---CHHHH----HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLNEI----EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~~~~----~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|+.++|++|++.+|+.|++||+.++.... ..++. .++++..++.+ .+.+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWD-------EVKDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhhhhCCcccCCHHHH
Confidence 57788999999999999899999998763211 11222 22222222221 112345667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|+||||||||++||+++...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
..+
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 765
No 327
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=373.33 Aligned_cols=219 Identities=32% Similarity=0.553 Sum_probs=184.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
|.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC---CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...+|+.++|++|++.+|+.|++||+.++.... +. +++.++++..++.+ ++....+..+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 556788999999999999899999998763211 11 12223333333222 22234566778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998865 99999999999999999999
Q ss_pred HHhc
Q 000687 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 8765
No 328
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=372.80 Aligned_cols=219 Identities=26% Similarity=0.411 Sum_probs=181.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~ 1160 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
++|+||++.+|.+ |+++|+.++....+.++..+.++ +.+..++ +++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 99999987532222222222111 1111111 111112234567999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+||||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999864 5899999999999774 5999999999999999999999743
No 329
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.2e-40 Score=369.06 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=173.7
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR 1158 (1350)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 136999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cccEEEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1159 -RHMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 -~~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++++. .......||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 68999999999885 599999986321 112 2234455555555433 3344467999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEe
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVA 1298 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~Iv 1298 (1350)
+|||||+++|+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999874 378999999999999889999999999986
No 330
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=390.90 Aligned_cols=219 Identities=31% Similarity=0.524 Sum_probs=189.2
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
..|+++||+++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|++||.++.+++. .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 369999999999999999999999999999999999999999999999999987764 4778
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLA 1233 (1350)
++||+|++.||.. |++|||.++.. ..+. +++.++++..++.++..+. ..+||||||||+|||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-----------~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRK-----------PHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999999999975 99999998632 1232 3455666666666554433 357999999999999
Q ss_pred HHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhcC
Q 000687 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~~ 1310 (1350)
|||+++|++||||||||+||..+...+.+.|++.. .|.|+|+|||+++.+. -||||+||++|++++.|+|+++..+
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~- 240 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH- 240 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC-
Confidence 99999999999999999999999999998887754 3789999999999875 5999999999999999999999976
Q ss_pred CCchhH
Q 000687 1311 PDGCYA 1316 (1350)
Q Consensus 1311 ~~g~y~ 1316 (1350)
|...|.
T Consensus 241 p~~~~~ 246 (377)
T PRK11607 241 PTTRYS 246 (377)
T ss_pred CccHHH
Confidence 565553
No 331
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-41 Score=373.57 Aligned_cols=212 Identities=29% Similarity=0.465 Sum_probs=180.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhccc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~i 1161 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999974 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCCCCCcc-cHHHHhccCCCCC--CHHH-HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGHESA--TESE-IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~--tdee-i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
+|+||++.+|.. |+++|+.++.... ..++ ..++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653211 1122 122222222 1223334556679999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998753 7999999999999975 9999999999999999999983
No 332
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.6e-41 Score=367.59 Aligned_cols=203 Identities=37% Similarity=0.642 Sum_probs=175.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 56899
Q ss_pred EEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++... ....||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986521 122 2344556666666655433 345799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999865 38999999999999876 9999999999999876
No 333
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.9e-40 Score=377.43 Aligned_cols=218 Identities=26% Similarity=0.433 Sum_probs=184.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
.|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 6999999999963 3699999999999999999999999999999999999999999999999998776543 357
Q ss_pred cceEEEcccCccccc-cHHHHhhcCCCC---CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 504 QQIGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
++++|++|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999976 999999875211 12111111 112223333 5555556667899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998753 7999999999999876 999999999999999999998764
No 334
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=375.74 Aligned_cols=221 Identities=26% Similarity=0.462 Sum_probs=185.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.++++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 6999999999963 359999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCC--CCCHHH-HHHHHHHHchHHHHhcC--CCCccccccCCCCCCChhHHHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNE-IEEAARVANAYSFIIKL--PDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~~~~~-~~~~~~~~~~~~~i~~l--~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
..++++++|++|++.+|..|++||+.++.. ....++ ..+. +.+.+..+ .+++....+..+.+||||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qr 175 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEI-----VEKSLRGAAIWDELKDRLHDNAYGLSGGQQQR 175 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCcchHHHHHhcCcccCCHHHHHH
Confidence 567889999999999998899999987532 111111 1111 11111111 1234445667788999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 176 v~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 176 LCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998778999999999999875 99999999999999999999976
Q ss_pred cc
Q 000687 654 KG 655 (1350)
Q Consensus 654 ~~ 655 (1350)
.+
T Consensus 256 ~~ 257 (271)
T PRK14238 256 NP 257 (271)
T ss_pred CC
Confidence 53
No 335
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.3e-40 Score=373.94 Aligned_cols=218 Identities=32% Similarity=0.523 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---------
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK--------- 498 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~--------- 498 (1350)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999963 36999999999999999999999999999999999999999999999999987543
Q ss_pred ----HHHHhcceEEEcccCcccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 499 ----LRWLRQQIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 499 ----~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
...+|+.++|++|++.+|. .|+.||+.++.. ....++..+ .+.+.+..+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2457889999999999885 699999987521 112122111 223444444 6666667778899999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|++|||||||++||+.++..+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 8999999999999865 99999999999999999
Q ss_pred hHHHHhcc
Q 000687 648 HDELIAKG 655 (1350)
Q Consensus 648 ~~~l~~~~ 655 (1350)
++++....
T Consensus 231 ~~~~~~~~ 238 (252)
T TIGR03005 231 PDEIFRQP 238 (252)
T ss_pred HHHHhcCC
Confidence 99997653
No 336
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=376.88 Aligned_cols=220 Identities=30% Similarity=0.559 Sum_probs=186.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 69999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 507 GLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+|. ++..|++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4567999999876321 22222221 112233333 5555566677899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 5899999999999878999999999999999998888654
No 337
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=376.43 Aligned_cols=218 Identities=28% Similarity=0.488 Sum_probs=185.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~l 1154 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CCCHH-----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATES-----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~tde-----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|++||+.++.. ..+++ .+.++++..++.+ ++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 12221 2334444443322 233334556778999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 865
No 338
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=384.69 Aligned_cols=231 Identities=24% Similarity=0.386 Sum_probs=183.7
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCcEEEECCeeCCCCCHHH
Q 000687 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD----PTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++|++++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999974321 369999999999999999999999999999999999998 48999999999999888765
Q ss_pred Hh----cceEEEcccCc--ccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCcc---ccccCCCCCCC
Q 000687 502 LR----QQIGLVSQEPA--LFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD---TQVGERGVQLS 568 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~--lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~v~~~g~~LS 568 (1350)
++ +.|+||||+|. +++ .|+.+|+..... ....++..+ .+.+.+..+ |++ ...+..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~-----~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQ-----RAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 54 37999999994 443 366665532110 111111111 112233333 443 34567888999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEI 645 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~ 645 (1350)
|||||||+|||||+.+|++||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999885 38999999999999865 999999999999999
Q ss_pred cChHHHHhccCCcHHHHHH
Q 000687 646 GTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~ 664 (1350)
|+++++++++.+.+.+.++
T Consensus 236 g~~~~~~~~p~hpyt~~ll 254 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQALL 254 (326)
T ss_pred CCHHHHhhCCCChHHHHHH
Confidence 9999999775444444444
No 339
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=374.57 Aligned_cols=219 Identities=34% Similarity=0.555 Sum_probs=184.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC--------
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL-------- 497 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~-------- 497 (1350)
+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 3699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhcceEEEcccCccccc-cHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccc-cCCCCCC
Q 000687 498 -----KLRWLRQQIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQV-GERGVQL 567 (1350)
Q Consensus 498 -----~~~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v-~~~g~~L 567 (1350)
....+|++++||||++.+|.. |++||+.++.. .....+..+ .+.+.+..+ |+.... ...+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccC
Confidence 134667899999999999975 99999986421 111111111 122334444 555443 5677899
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEI 645 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~ 645 (1350)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999885 48999999999999986 999999999999999
Q ss_pred cChHHHHhc
Q 000687 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999998764
No 340
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=385.44 Aligned_cols=229 Identities=23% Similarity=0.350 Sum_probs=187.7
Q ss_pred cEEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC----CCccEEEECCccCCCCChHH
Q 000687 1082 EVELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE----PSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~l~~ 1156 (1350)
-++++|++++|+.... .++|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975322 359999999999999999999999999999999999998 48999999999999988776
Q ss_pred hhc----ccEEEccCCC--CCc-ccHHHHh----ccCCC---CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCC
Q 000687 1157 LRR----HMAIVPQEPC--LFA-STIYENI----AYGHE---SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1157 lR~----~i~~VpQdp~--LF~-gTIreNL----~~~~~---~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
+|+ .|+||||+|. ++. -|+.+|+ ..... ....+++.++++.+++.+... .......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPAS--------RLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH--------HHhCCchhC
Confidence 553 6999999995 432 3555544 32211 012344667777777753211 123456789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEee
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1223 SgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE 1299 (1350)
|||||||++|||||+.+|++||+||||++||+.+...|.+.|+++. .|.|+|+|||+++.+. .||||+||.+|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999875 3899999999999985 599999999999999
Q ss_pred ecChhHHhhcCCCchhHHHH
Q 000687 1300 LGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1300 ~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
.|++++++++ +...|.+..
T Consensus 235 ~g~~~~~~~~-p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRA-PRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhC-CCChHHHHH
Confidence 9999999986 566776544
No 341
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=375.36 Aligned_cols=219 Identities=32% Similarity=0.498 Sum_probs=188.4
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~ 1153 (1350)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46999999999963 3699999999999999999999999999999999999985 48999999999864 45
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCC------CCC-HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE------SAT-ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~------~~t-deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|++++|+||+|.+|+.|++||+.++.. ..+ ++.+.++++.+++.+++.. .....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999986421 111 2335567777777654432 2234566899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEe-----CCEEeee
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID-----DGKVAEL 1300 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~-----~G~IvE~ 1300 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999865 99999998 5999999
Q ss_pred cChhHHhhc
Q 000687 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999999765
No 342
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.7e-40 Score=384.13 Aligned_cols=229 Identities=24% Similarity=0.412 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC---ccEEEECCccCCCCChHHh
Q 000687 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS---SGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~i~l~~l 1157 (1350)
-++++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|. +|+|++||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996432 236999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEccCC--CCCc-ccHHHHhccC---CCCCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1158 R----RHMAIVPQEP--CLFA-STIYENIAYG---HESATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1158 R----~~i~~VpQdp--~LF~-gTIreNL~~~---~~~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
| ++|+||||+| .++. .|+.+|+... ....+.++ +.+.++.+++ |++.+ .++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChHH-HhcCCcccCC
Confidence 4 4799999999 4544 4777776421 11123333 3344444443 33322 2456678899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeee
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~ 1300 (1350)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ |.|+|+|||+++.+. .||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 889999999999996 5999999999999999
Q ss_pred cChhHHhhcCCCchhHHHH
Q 000687 1301 GSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1301 Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|++++++++ +...|.+..
T Consensus 244 g~~~~i~~~-p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQ-PSHPYSIGL 261 (330)
T ss_pred CCHHHHHhC-CCCHHHHHH
Confidence 999999986 677777643
No 343
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=370.22 Aligned_cols=218 Identities=27% Similarity=0.450 Sum_probs=182.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH-HHhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR-WLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~-~~r~~ 505 (1350)
+|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 5899999999963 3699999999999999999999999999999999999999999999999999887754 36788
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|++|++.+|.. |++||+.++....+.++..+.+ .+.+..++ +++........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999975 9999998864322222222211 11222221 122223456678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|+||||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998875 48999999999998765 99999999999999999999864
No 344
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-40 Score=378.58 Aligned_cols=221 Identities=32% Similarity=0.551 Sum_probs=185.0
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHH
Q 000687 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~ 500 (1350)
.|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 14699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhcceEEEcccC--ccccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHH
Q 000687 501 WLRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri 575 (1350)
..++.|+|++|+| .+|..|++|||.++.. ..+.++..+ .+.+.+..+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778999999998 5777899999987532 122222211 122334444 665 345677889999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 58999999999999865 99999999999999999998865
Q ss_pred c
Q 000687 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 345
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=367.18 Aligned_cols=213 Identities=28% Similarity=0.453 Sum_probs=177.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.++.. |++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 111111111 112223333 444444555678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
|++|||||||++||+++.+.+.+.|+++. + ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998875 3 7899999999999876 999999999999999987764
No 346
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-41 Score=369.33 Aligned_cols=205 Identities=33% Similarity=0.520 Sum_probs=175.5
Q ss_pred EEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1083 VELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
|+++|++++|+.... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 578999999964111 469999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCCCCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~--~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+||||+|.+|. .|++||+.++.. .. .++++.++++..++.++..+. ..+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAY-----------PHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHHH
Confidence 99999999987 699999986421 11 134566667777766554433 3579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEe--CCEEeeecCh
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVID--DGKVAELGSH 1303 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~--~G~IvE~Gt~ 1303 (1350)
||+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+. .||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 3899999999999875 499999999 7999998764
No 347
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=379.91 Aligned_cols=223 Identities=30% Similarity=0.497 Sum_probs=183.5
Q ss_pred cceEEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----C-
Q 000687 425 SGLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----L- 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~- 497 (1350)
.+.|+++|++++|+++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhcceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHH
Q 000687 498 KLRWLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQK 572 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqk 572 (1350)
+...+|+.|+||+|+| .+|..|++||+.++... ...++..+.+ .+.+..+ |+. ...+..+.+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 46778999999876421 2222222211 1222222 332 234567789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998875 38999999999998865 9999999999999999998
Q ss_pred HHHhc
Q 000687 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 88653
No 348
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.1e-40 Score=367.16 Aligned_cols=209 Identities=33% Similarity=0.574 Sum_probs=175.4
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000687 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---LR 503 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~r 503 (1350)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -cceEEEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 504 -QQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 504 -~~i~~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
++++||+|++.+|. .|++||+.++.. ..+..+..+ .+.+.+..+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 68999999999886 599999987421 111111111 112344444 6666667777899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVS 643 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~ 643 (1350)
||+.+|+||||||||++||++++..+.+.|+++. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 379999999999998889999999999985
No 349
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-40 Score=376.77 Aligned_cols=219 Identities=32% Similarity=0.536 Sum_probs=184.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|++. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999632 3599999999999999999999999999999999999999999999999999877777888899
Q ss_pred EEEcccC--ccccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 507 GLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+| .+|+.|++||+.++.. ..+.++..+. +.+.+..+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHR-----VSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 3677899999987532 1222221111 12223332 4444455566789999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999998753 899999999999985 5999999999999999999998754
No 350
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.6e-40 Score=363.31 Aligned_cols=199 Identities=34% Similarity=0.573 Sum_probs=169.1
Q ss_pred EEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000687 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999641 469999999999999999999999999999999999999999999999998754 456778999
Q ss_pred EcccC--ccccccHHHHhhcCCCCCC--HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 509 VSQEP--ALFATTIKENILLGRPDAD--LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 509 v~Q~~--~lf~~ti~~Ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|+| .+|..|++||+.++.+... .+++.++++.. |++.........||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL-----------DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc-----------CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4677899999988643222 12334444443 344444555678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHh-cCCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRF-MIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVS 643 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~ 643 (1350)
|++|||||||++||+.+.+.+.+.|+++ .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987 458999999999999875 9999999999975
No 351
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=372.67 Aligned_cols=218 Identities=31% Similarity=0.504 Sum_probs=182.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCC--CC---CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY--DP---TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~---~~G~i~i~g~~~~~~--~~ 499 (1350)
.++++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 5899999999963 35999999999999999999999999999999999995 46 599999999998643 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC--C-CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|+.++||+|++.+|+.|++||+.++... . ..+ ++.++++..++.+ ++.+..+..+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWD-------EVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCch-------hHHHHHhcCcccCCHHHH
Confidence 5678899999999999999999999875311 1 111 1222222222211 223445677889999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988768999999999998865 999999999999999999999
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
.+.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 765
No 352
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=377.79 Aligned_cols=217 Identities=27% Similarity=0.515 Sum_probs=183.2
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----ChHH
Q 000687 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~l~~ 1156 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997431 13699999999999999999999999999999999999999999999999998764 3567
Q ss_pred hhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHHH----HHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdeei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++|+|+||+| .+|+.|+++|+.++.. ..+.++. .++++..++.+ ........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 1233333 23334444421 1234455689999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999865 48999999999999854 999999999999999999998
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 353
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=374.30 Aligned_cols=218 Identities=28% Similarity=0.474 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCC--CCCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIR--KYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~i~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 47999999999985 3456
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCC--C---CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES--A---TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~---tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++++|+||+|.+|+.|+++|+.++... . .++++.++++.+++.+.+.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345566677777655432 2345567899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEe---------CCEEee
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVID---------DGKVAE 1299 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~---------~G~IvE 1299 (1350)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+. .||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999998877789999999999875 589999998 899999
Q ss_pred ecChhHHhhc
Q 000687 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 354
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=373.29 Aligned_cols=220 Identities=30% Similarity=0.467 Sum_probs=186.3
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
...|+++|++|+|++ +++|+|+||++++||+++|+||||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 447999999999963 469999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhhcCCCC--C-CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChh
Q 000687 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGG 570 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgG 570 (1350)
+...+|+.|+||+|++.+|..|++||+.++... . +.+ ++.++++..++.+ ++++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCHH
Confidence 455678899999999999989999999886321 1 111 1222333333222 2234566778899999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000687 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98764
No 355
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=371.43 Aligned_cols=218 Identities=31% Similarity=0.507 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcC---CCC--CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERF---YDP--TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~i~g~~~~~~--~~ 499 (1350)
+|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 3599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC---CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|+.++|+||++.+|..|++||+.++.... ..+ ++.++++..+ +++.+.+.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAA-------LWDEVKDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcC-------CCcchhhhhhCCcccCCHHHH
Confidence 56788999999999999889999998753211 111 1222222222 222223456677889999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
.++
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 765
No 356
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-40 Score=371.26 Aligned_cols=228 Identities=26% Similarity=0.480 Sum_probs=186.9
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCCC--
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKSL-- 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~~-- 497 (1350)
++.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 357999999999963 369999999999999999999999999999999999986 4 689999999998643
Q ss_pred CHHHHhcceEEEcccCcccc-ccHHHHhhcCCCC---CCHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCCh
Q 000687 498 KLRWLRQQIGLVSQEPALFA-TTIKENILLGRPD---ADLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSG 569 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSg 569 (1350)
+...+|+.++|+||++.+|. .|++||+.++... .+.+ ++.++++..++.+. +....+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDE-------VKDRLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcCcCCH
Confidence 44567889999999999987 5999999875311 1111 12233333332221 12234566789999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778999999999999865 999999999999999999
Q ss_pred HHHHhccCCcHHHH
Q 000687 649 DELIAKGENGVYAK 662 (1350)
Q Consensus 649 ~~l~~~~~~~~~~~ 662 (1350)
+++...+....++.
T Consensus 232 ~~~~~~~~~~~~~~ 245 (252)
T PRK14256 232 KKIFTTPEKKQTED 245 (252)
T ss_pred HHHHhCCCcHHHHH
Confidence 99976543333333
No 357
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-40 Score=382.57 Aligned_cols=217 Identities=31% Similarity=0.492 Sum_probs=182.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 5899999999963 3599999999999999999999999999999999999999999999999998654 35678899
Q ss_pred EEEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
||+||++.++. .|++||+.+... ..+..+..+.+ .+.+..+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 599999975321 12222222221 1222222 44444455567899999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999874 58999999999999875 999999999999999999998754
No 358
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=371.99 Aligned_cols=224 Identities=27% Similarity=0.508 Sum_probs=192.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~l 1154 (1350)
.++++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 369999999999999999999999999999999999875 389999999999875 346
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|.+|+++|+.++.. .. + ++++.++++.+++.+++..+ ....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678999999999999999999999986521 11 1 23456677777876665421 3345678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||+||||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998866 899999999999999999999
Q ss_pred hhcCCCchhH
Q 000687 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
... +.+.|.
T Consensus 233 ~~~-~~~~~~ 241 (250)
T PRK14266 233 FIN-PKDKRT 241 (250)
T ss_pred HhC-CCChHH
Confidence 765 455544
No 359
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=371.62 Aligned_cols=204 Identities=28% Similarity=0.445 Sum_probs=179.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 36999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEccCCCCCc-ccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p 1240 (1350)
+|+||+|.+|. .|++||+.++.....++++.++++..++.++.. ....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRAN-----------EWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 699999987643223556777777777765433 334689999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChh
Q 000687 1241 EIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~ 1304 (1350)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 3799999999999985 49999999999999998765
No 360
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=374.77 Aligned_cols=220 Identities=31% Similarity=0.498 Sum_probs=185.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 69999999999742 23599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEcccCc-cc-cccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 507 GLVSQEPA-LF-ATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~-lf-~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
+|++|+|. +| ..|+++|+.++... ...++..+. +.+.+..+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRR-----VSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 56899999886432 122222111 11222222 4444455667899999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 7999999999999878999999999999999999998654
No 361
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=372.56 Aligned_cols=218 Identities=29% Similarity=0.476 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i--~l 1154 (1350)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3699999999999999999999999999999999999885 799999999998653 44
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||++.+|..|++||+.++.. .. + .+++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 567889999999999999999999986521 11 1 2345566777766443322 23345678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999865 999999999999999999999
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 765
No 362
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.5e-40 Score=374.70 Aligned_cols=217 Identities=29% Similarity=0.466 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCC------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH
Q 000687 1083 VELKHVDFSYPSR------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~ 1156 (1350)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 1346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---hhcccEEEccCCC--CC-cccHHHHhccCCC---CC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1157 ---LRRHMAIVPQEPC--LF-ASTIYENIAYGHE---SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1157 ---lR~~i~~VpQdp~--LF-~gTIreNL~~~~~---~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+|+.++|+||+|. ++ ..|++|||.++.. .. .++++.++++..++.+ ......+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 4699999964311 11 1234445555554431 12334566899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeee
Q 000687 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~ 1300 (1350)
||||||++|||||+.+|+||||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 8999999999999974 999999999999999
Q ss_pred cChhHHhhc
Q 000687 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|++++++..
T Consensus 233 g~~~~~~~~ 241 (265)
T TIGR02769 233 CDVAQLLSF 241 (265)
T ss_pred CCHHHHcCC
Confidence 999999864
No 363
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=376.89 Aligned_cols=221 Identities=30% Similarity=0.536 Sum_probs=187.1
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC---cEEEECCeeCCCCCHHHH
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS---GQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~i~g~~~~~~~~~~~ 502 (1350)
+.|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 479999999999642 2469999999999999999999999999999999999999998 899999999987777778
Q ss_pred hcceEEEcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 503 RQQIGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r~~i~~v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
++++|||+|+|. +++.|++|||.++... .+.++..+. +.+.+..+ |+....+....+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKI-----VRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5678999999886432 222222111 12223333 455555666789999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 8999999999999978999999999999999999988654
No 364
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.6e-40 Score=388.85 Aligned_cols=208 Identities=31% Similarity=0.461 Sum_probs=178.4
Q ss_pred CcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc----cCCCCChHHhh----cccEEEccCCCC
Q 000687 1099 PIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK----DIRKYNLKSLR----RHMAIVPQEPCL 1170 (1350)
Q Consensus 1099 ~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~----di~~i~l~~lR----~~i~~VpQdp~L 1170 (1350)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+.+.+| ++|+||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5899999999999999999999999999999999999999999999995 67777665543 589999999999
Q ss_pred Cc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000687 1171 FA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIM 1243 (1350)
Q Consensus 1171 F~-gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~IL 1243 (1350)
|+ .|++||+.++.. ..+. +.+.++++..++.++.... ..+||||||||++|||||+.+|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~-----------~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKK-----------PGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 799999987632 1222 3456677777776654433 3579999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHHhhcCCCchhHHH
Q 000687 1244 LLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1244 lLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
|||||||+||+.+.+.+++.|.+..+ ++|+|+|||+++.+ +.||||++|++|++++.|++++++.+ +...|.+.
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~-p~~~~~~~ 263 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN-PANDYVAD 263 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC-cchHHHHH
Confidence 99999999999999999999998753 89999999999997 55999999999999999999999876 45545443
No 365
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-40 Score=366.57 Aligned_cols=201 Identities=37% Similarity=0.604 Sum_probs=175.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH---Hhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~---~lR~ 1159 (1350)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999887643 4688
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCC------CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~------~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
+++|+||+|.+|. .|++||+.++.. ...+++++++++..++.+.....| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999885 699999986421 112346677778777766554433 4799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCE
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGK 1296 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~ 1296 (1350)
||||+++|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999864 58999999999999976 89999999985
No 366
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.6e-40 Score=370.37 Aligned_cols=222 Identities=29% Similarity=0.460 Sum_probs=187.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4899999999963 36999999999999999999999999999999999999999999999999988776654 4567
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCC-H-HH---HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDAD-L-NE---IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
++|++|++.+|.+ |++||+.++..... . .. .........+.+.+..+ |++........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999986 99999988642100 0 00 00001111234445554 6666677788899999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|++.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999998778999999999999976 99999999999999999998864
No 367
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=365.65 Aligned_cols=203 Identities=27% Similarity=0.478 Sum_probs=173.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++|+|++ .++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 36999999999999 99999999999999999999999999999999999988766 66788999
Q ss_pred EEcccCccccc-cHHHHhhcCCC--CCCH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 508 LVSQEPALFAT-TIKENILLGRP--DADL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
|++|++.+|.. |++||+.+... ..+. +++.++++.. |++........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELV-----------NLGDRAKKKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC-----------CCHHHHhCchhhCCHHHHHHHHHHHH
Confidence 99999999876 99999986421 1111 2223333333 33333344567899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999875 9999999999998765
No 368
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-40 Score=374.44 Aligned_cols=221 Identities=31% Similarity=0.520 Sum_probs=186.8
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--
Q 000687 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS-- 496 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~-- 496 (1350)
..+.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 22 ~~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~ 98 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKK 98 (272)
T ss_pred CCcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccc
Confidence 3457999999999963 3599999999999999999999999999999999999984 89999999999864
Q ss_pred CCHHHHhcceEEEcccCccccccHHHHhhcCCCCC---CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCCh
Q 000687 497 LKLRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSG 569 (1350)
Q Consensus 497 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSg 569 (1350)
.+..++|+.++|++|++.+|+.|++||+.++.... .. +++.++++..++.+ .+.+..+..+.+|||
T Consensus 99 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~ 171 (272)
T PRK14236 99 VDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSG 171 (272)
T ss_pred cCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCH
Confidence 34567788999999999999889999998753211 11 12333333333322 222456677889999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~ 648 (1350)
|||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 172 Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 251 (272)
T PRK14236 172 GQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDT 251 (272)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCH
Confidence 9999999999999999999999999999999999999999998778999999999999865 999999999999999999
Q ss_pred HHHHhc
Q 000687 649 DELIAK 654 (1350)
Q Consensus 649 ~~l~~~ 654 (1350)
+++...
T Consensus 252 ~~~~~~ 257 (272)
T PRK14236 252 DTLFTS 257 (272)
T ss_pred HHHhcC
Confidence 998754
No 369
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.4e-40 Score=363.43 Aligned_cols=210 Identities=29% Similarity=0.468 Sum_probs=188.1
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh----HHhhc
Q 000687 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL----KSLRR 1159 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l----~~lR~ 1159 (1350)
.+.|+.|+|+.+ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999754 469999999999999999999999999999999999999999999999999876542 34577
Q ss_pred ccEEEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1160 HMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
.++|++|+|.+|+.|++|||.++.+ ..+++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998653 456667888888999999999999999999988999999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHH--HHHHhc-CCceEEEEccCchHHhhcCEEEEEeCCE
Q 000687 1240 AEIMLLDEATSALDAESERSVQE--ALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGK 1296 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~--~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~G~ 1296 (1350)
|++|||||||++||+.+...+.+ .++... .|+|+|++||+++.+..||+|++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 455443 4789999999999999999999999884
No 370
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.1e-40 Score=384.34 Aligned_cols=218 Identities=31% Similarity=0.493 Sum_probs=182.6
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+.
T Consensus 40 ~~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ 115 (340)
T PRK13536 40 VAIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARAR 115 (340)
T ss_pred eeEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhcc
Confidence 36999999999963 35999999999999999999999999999999999999999999999999987654 467889
Q ss_pred eEEEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 506 IGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~ 582 (1350)
||||||++.++. .|++||+.+... ..+..+..+.+ .+.+..+ |+.........+||||||||++|||||+
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~ 188 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALI 188 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHh
Confidence 999999999874 599999986322 11222222211 1222222 3333344555689999999999999999
Q ss_pred cCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|+|+..|+++++...
T Consensus 189 ~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 189 NDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999885 48999999999999976 999999999999999999998754
No 371
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=378.64 Aligned_cols=218 Identities=28% Similarity=0.513 Sum_probs=182.9
Q ss_pred cEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----ChH
Q 000687 1082 EVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~l~ 1155 (1350)
.|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 346
Q ss_pred HhhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1156 SLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..|+.++|+||+| .+|..|++|||.++.. ..+.++ +.++++..++.. ........+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHH
Confidence 6788999999998 5788899999986421 223332 334444444431 122344568999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 5899999999999985 599999999999999999999
Q ss_pred Hhhc
Q 000687 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
++..
T Consensus 232 ~~~~ 235 (287)
T PRK13641 232 IFSD 235 (287)
T ss_pred HhcC
Confidence 8754
No 372
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=371.35 Aligned_cols=213 Identities=28% Similarity=0.479 Sum_probs=180.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC------CCChHH
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR------KYNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~------~i~l~~ 1156 (1350)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999964 36999999999999999999999999999999999999999999999999873 123457
Q ss_pred hhcccEEEccCCCCCcc-cHHHHhccCC---CCCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1157 LRRHMAIVPQEPCLFAS-TIYENIAYGH---ESATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF~g-TIreNL~~~~---~~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++++|+||+|.+|.+ |++||+.++. ...+. +++.++++..++.++ ......+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPY-----------ADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 78899999999999875 9999997421 11222 223444444444433 33445689999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|++||||++++|+||||||||++||+++...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999865 48999999999999865 999999999999999999987
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 643
No 373
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-40 Score=377.66 Aligned_cols=220 Identities=31% Similarity=0.524 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHH
Q 000687 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~ 501 (1350)
|+++||+|+|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998754 3466
Q ss_pred HhcceEEEcccC--ccccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHHH
Q 000687 502 LRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri~ 576 (1350)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+.+ .+.+..+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987532 12223222211 2233333 554 3456677899999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||+.+|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 48999999999999865 999999999999999999988653
No 374
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.1e-40 Score=374.24 Aligned_cols=229 Identities=25% Similarity=0.400 Sum_probs=191.0
Q ss_pred cEEEEEEEEECCCC------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChH
Q 000687 1082 EVELKHVDFSYPSR------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~ 1155 (1350)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HhhcccEEEccCCC--CCc-ccHHHHhccCC---CCC----CHHHHHHHHHHhcch-HHHhcCCCCccccccCCCCCCCh
Q 000687 1156 SLRRHMAIVPQEPC--LFA-STIYENIAYGH---ESA----TESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~--LF~-gTIreNL~~~~---~~~----tdeei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
..|++++|+||+|. ++. -|+.+|+.+.. ... .++++.++++..++. +... ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-----------YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-----------cCchhcCH
Confidence 66788999999985 444 38888886421 111 234567777777773 3322 22357999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 38899999999999986 9999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHh
Q 000687 1302 SHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1302 t~~eLl~~~~~g~y~~l~~~ 1321 (1350)
+++++........+++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 233 STADVLASPLHELTKRLIAG 252 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHh
Confidence 99999876334556677764
No 375
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=379.72 Aligned_cols=220 Identities=29% Similarity=0.501 Sum_probs=183.0
Q ss_pred CCcEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----C-
Q 000687 1080 RGEVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----Y- 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----i- 1152 (1350)
.+.|+++||+++|+..+ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997532 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred ChHHhhcccEEEccCC--CCCcccHHHHhccCCC--CCCHHHHH----HHHHHhcchHHHhcCCCCccccccCCCCCCCh
Q 000687 1153 NLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEII----EAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~tdeei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+...+|++++|+||+| .+|..|++||+.++.. ....++.. +.++..++ |++ ........|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PED---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Chh---HhcCChhhCCH
Confidence 4567888999999998 4778899999986532 12333322 22333332 211 23345578999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeec
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~G 1301 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999875 3899999999999875 59999999999999999
Q ss_pred ChhHHhhc
Q 000687 1302 SHSHLLKN 1309 (1350)
Q Consensus 1302 t~~eLl~~ 1309 (1350)
++++++..
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99998754
No 376
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.7e-40 Score=368.37 Aligned_cols=215 Identities=32% Similarity=0.489 Sum_probs=180.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcce
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~i 506 (1350)
|+++||++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 36999999999999999999999999999999999999999999999999998776654 46789
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|.. |++||+.++.......+ .+. ..+.+..+ ++++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999987643221111 010 01112111 12334456677789999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
+++||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999998753 7999999999999986 9999999999999999998873
No 377
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=376.72 Aligned_cols=213 Identities=30% Similarity=0.490 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC--CCChHHhhcc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR--KYNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~i~l~~lR~~ 1160 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 36999999999999999999999999999999999999999999999999985 3445678889
Q ss_pred cEEEccCCC--CCcccHHHHhccCCC--CCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEPC--LFASTIYENIAYGHE--SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~--LF~gTIreNL~~~~~--~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
++||||+|. +|..|+.+|+.++.. ..+.+ ++.++++..++.++.. ....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHHH
Confidence 999999985 677899999986421 12322 3445666666655432 2346799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||||+.+|+||||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999864 58999999999999854 999999999999999999998764
No 378
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=372.41 Aligned_cols=213 Identities=30% Similarity=0.484 Sum_probs=184.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 4889999999963 3699999999999999999999999999999999999999999999999999888877888899
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC-------C---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA-------D---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
+|++|++.++.+ |++||+.++.... . .+++.++++.. |++......+..||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT-----------RINHLADRRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc-----------CCHHHHcCCcccCCHHHHHHH
Confidence 999999988876 9999999863210 1 11222222222 444445566789999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+||||++.+|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 99999999999999999999999999999999998875 48999999999999875 99999999999999999988764
No 379
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.3e-40 Score=363.05 Aligned_cols=203 Identities=30% Similarity=0.482 Sum_probs=174.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 3699999999999999999999999999999999999999999999999988654 45678899
Q ss_pred EEcccCcccc-ccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+|. .|++||+.++.. ..+.+++.++++..++ +......+..||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGL-----------KDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCC-----------HHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998884 699999987532 1233444444444443 3334455678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 48999999999999875 9999999999998765
No 380
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-40 Score=371.08 Aligned_cols=218 Identities=28% Similarity=0.489 Sum_probs=185.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 6999999999963 369999999999999999999999999999999999986 489999999998853 455
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC--C---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA--D---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
..+|++++|++|++.+|+.|++||+.++.... . .+++.++++.+++.+++ +...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 67788999999999999889999998864311 1 12233334444443332 223466778999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEE
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ---------QGSVSE 644 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~---------~G~i~~ 644 (1350)
++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777999999999999865 99999998 899999
Q ss_pred ecChHHHHhc
Q 000687 645 IGTHDELIAK 654 (1350)
Q Consensus 645 ~g~~~~l~~~ 654 (1350)
.|+++++...
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999765
No 381
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-40 Score=374.34 Aligned_cols=218 Identities=25% Similarity=0.431 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCCC-hH
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKYN-LK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~i~-l~ 1155 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999964 3699999999999999999999999999999999999986 6999999999987663 45
Q ss_pred HhhcccEEEccCCCCCcccHHHHhccCCC---CCCHHHHH----HHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE---SATESEII----EAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~tdeei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++|+||+|.+|..|+++|+.++.. ..+++++. +.++..++.+. +++.+...+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDA-------VKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCch-------hhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986531 13444433 23334443322 223345667789999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987767899999999999865 9999999999999999999998
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 75
No 382
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.1e-40 Score=365.35 Aligned_cols=202 Identities=31% Similarity=0.531 Sum_probs=174.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh---HHhhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l---~~lR~ 1159 (1350)
|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 369999999999999999999999999999999999999999999999999987754 35788
Q ss_pred ccEEEccCCCCCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
.++||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+..... ..+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRAL-----------PAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHH
Confidence 9999999999987 499999986521 112 23456666666666544332 35799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEE
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~I 1297 (1350)
||||+++|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 58999999999999975 899999999975
No 383
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=369.68 Aligned_cols=217 Identities=25% Similarity=0.437 Sum_probs=186.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
.|+++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 5899999999963 36999999999999999999999999999999999999999999999999998776543 5788
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCC---CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
++|++|++.+|.. |++||+.++... .+.++. ...+.+.+..+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 111111 12234455555 666667777889999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+.+|++|||||||++||+.+...+.+.++++. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 48999999999988765 99999999999999999998864
No 384
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=369.08 Aligned_cols=211 Identities=36% Similarity=0.611 Sum_probs=184.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|+|||++||+|+||||||||+++|+|+++|.+|+|++||+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 579999999964 369999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCCCCCcc-cHHHHhccCCC------CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~------~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |+++|+.++.. ...++++.++++..++.++....| .+||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999986421 112345666777777766655443 5799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+++|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999865 899999999999999999999865
No 385
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-40 Score=375.97 Aligned_cols=222 Identities=31% Similarity=0.489 Sum_probs=185.2
Q ss_pred ceEEEEEEEEECCCCC---CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-HHH
Q 000687 426 GLIELKHVDFSYPSRP---EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-LRW 501 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-~~~ 501 (1350)
.+|+++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++.+.. ...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 3699999999997421 246999999999999999999999999999999999999999999999999987653 355
Q ss_pred HhcceEEEcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 502 LRQQIGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~i 577 (1350)
+|+++|||||+|. +|..|+.+|+.++... .+..+..+. +.+.+..+ |+.........+||||||||++|
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~l 155 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRER-----VDESLKKV--GMYEYRRHAPHLLSGGQKQRVAI 155 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHH
Confidence 7889999999984 6667999999986321 122221111 12222222 44445556667999999999999
Q ss_pred HHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++..+
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999999874 38999999999999878999999999999999999998754
No 386
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.5e-40 Score=367.67 Aligned_cols=211 Identities=31% Similarity=0.526 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999987653 478899
Q ss_pred EEccCCCCCcc-cHHHHhccCCCC--CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~--~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |++||+.++... .+ ++++.++++..++.++..+ ...+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDR-----------YPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999865321 11 2345556666666544433 335799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++++|+++||||||++||+++++.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998654 7999999999999865 999999999999999999999854
No 387
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-40 Score=364.59 Aligned_cols=201 Identities=41% Similarity=0.681 Sum_probs=172.9
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEE
Q 000687 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~ 1163 (1350)
+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999642 1469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCC--CCCcccHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1164 VPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1164 VpQdp--~LF~gTIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
+||+| .++..|+++|+.++.. ..+ ++++.+.++..++.+++. .....||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 122 223445555555554433 3446799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCE
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGK 1296 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~ 1296 (1350)
|+++|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 48999999999999977 99999999985
No 388
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.5e-40 Score=365.98 Aligned_cols=198 Identities=29% Similarity=0.522 Sum_probs=170.4
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEE
Q 000687 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~ 1163 (1350)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999964 36999999999999999999999999999999999999999999999998874 46889999
Q ss_pred EccCCCC---CcccHHHHhccCCCC----------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1164 VPQEPCL---FASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1164 VpQdp~L---F~gTIreNL~~~~~~----------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|||+|.+ |..|++||+.++... ..++++.++++..++.++... ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999976 668999999875321 123456677777777665443 3457999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
+|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999865 68999999999999865 8999999986 66654
No 389
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=373.89 Aligned_cols=213 Identities=31% Similarity=0.489 Sum_probs=183.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 6999999999963 3699999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC----------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA----------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
+|++|++.++.. |+.||+.++.... ..+++.++++.. |++........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV-----------GLKPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCCHHHHHHH
Confidence 999999877655 9999999763210 112233333333 333344455668999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|.++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 38999999999999865 9999999999999999998875
Q ss_pred h
Q 000687 653 A 653 (1350)
Q Consensus 653 ~ 653 (1350)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 390
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-40 Score=372.79 Aligned_cols=218 Identities=28% Similarity=0.485 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~l 1154 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHhhcccEEEccCCCCCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1155 KSLRRHMAIVPQEPCLFA-STIYENIAYGHE---SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~---~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
..+|+.++|++|++.+|. .|+++|+.++.. ..+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999887 599999986421 111 234555666666644322 22344557899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEe------CCEEee
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVID------DGKVAE 1299 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~------~G~IvE 1299 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 9999999999999999999999999999999999999998877899999999999985 599999997 899999
Q ss_pred ecChhHHhhc
Q 000687 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999865
No 391
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=372.87 Aligned_cols=217 Identities=29% Similarity=0.519 Sum_probs=181.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCCC--HH
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSLK--LR 500 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~~--~~ 500 (1350)
-+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 369999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhcceEEEcccCccccccHHHHhhcCCC--CC--CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 501 WLRQQIGLVSQEPALFATTIKENILLGRP--DA--DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~--~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
.+|+.++||+|++.+|+.|++||+.++.. .. ..+ ++.++++..++.+ .+.+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWE-------ELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCc-------hhhhHhhcChhhCCHHHH
Confidence 57889999999999998999999987621 11 111 1222222222211 112345667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999999
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 765
No 392
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-40 Score=370.86 Aligned_cols=218 Identities=28% Similarity=0.493 Sum_probs=187.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC-CCChH
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR-KYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~i~l~ 1155 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 3699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HhhcccEEEccCCCCCcccHHHHhccCCC--CCC-----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE--SAT-----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~t-----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|+.++|+||+|.+|..|++||+.++.. ... ++++.++++.+++.+.+. .........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 88999999999999999999999986531 111 223455566666654332 2334456689999999
Q ss_pred HHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHh
Q 000687 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999987
Q ss_pred hc
Q 000687 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
.+
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 393
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-40 Score=370.61 Aligned_cols=213 Identities=29% Similarity=0.473 Sum_probs=186.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999964 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCC-CcccHHHHhccCCCCC------CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCL-FASTIYENIAYGHESA------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~L-F~gTIreNL~~~~~~~------tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+ +..|++||+.++.... .++++.++++..++.++.. .....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998753211 1234566666666655433 3346799999999999999
Q ss_pred hc------cCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHH
Q 000687 1236 FV------RKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 Ll------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
|+ .+|++|||||||++||+.+...+.+.|++.. +|+|||+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999865 4889999999999986 5999999999999999999998
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 754
No 394
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.7e-40 Score=351.75 Aligned_cols=178 Identities=37% Similarity=0.647 Sum_probs=165.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 4789999999743 23699999999999999999999999999999999999999999999999988766 567788999
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 458999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~g 646 (1350)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998764
No 395
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=372.79 Aligned_cols=221 Identities=28% Similarity=0.487 Sum_probs=190.5
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC---
Q 000687 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR--- 1150 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~--- 1150 (1350)
..+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|++||.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999963 3699999999999999999999999999999999999875 7999999998874
Q ss_pred -CCChHHhhcccEEEccCCCCCcccHHHHhccCCC--C-----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCC
Q 000687 1151 -KYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--S-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1151 -~i~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
......+|++++|+||+|.+|.+|++||+.++.. . ..++++.++++.+++.+.+ ....+.....|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccC
Confidence 3345678899999999999999999999986521 1 1235566777777664432 23345556789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEeCCEEeeec
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1223 SgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~G 1301 (1350)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999998877899999999999996 59999999999999999
Q ss_pred ChhHHhhc
Q 000687 1302 SHSHLLKN 1309 (1350)
Q Consensus 1302 t~~eLl~~ 1309 (1350)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99999865
No 396
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4e-40 Score=366.90 Aligned_cols=214 Identities=37% Similarity=0.569 Sum_probs=176.1
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHH
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~ 502 (1350)
.|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 378999999996421 1269999999999999999999999999999999999999999999999999987763 567
Q ss_pred hcceEEEcccC--ccc-cccHHHHhhcCCCCC---CHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHH
Q 000687 503 RQQIGLVSQEP--ALF-ATTIKENILLGRPDA---DLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 503 r~~i~~v~Q~~--~lf-~~ti~~Ni~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri 575 (1350)
|++++|++|++ .++ ..|++||+.++.... ..++..+.+ ..+.+..+ |+. ........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 88999999999 344 469999997642111 111111110 02334444 553 456777889999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
+|||||+.+|++|||||||++||+.++..+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998853 8999999999999874 9999999999998765
No 397
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=369.25 Aligned_cols=218 Identities=30% Similarity=0.496 Sum_probs=184.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 6899999999963 3599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC---CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|+.++|+||++.+|+.|++||+.++.... +.+ ++.++++.+++. +++....+.....||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALW-------DEVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCc-------hhhhhHhhCCcccCCHHHH
Confidence 56788999999999999999999998763211 111 222333333322 1223345667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 765
No 398
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-40 Score=374.43 Aligned_cols=218 Identities=28% Similarity=0.407 Sum_probs=180.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC--CCCHHHHhc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--SLKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--~~~~~~~r~ 504 (1350)
+|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...+|+
T Consensus 1 ml~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 77 (271)
T PRK13638 1 MLATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQ 77 (271)
T ss_pred CeEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHh
Confidence 4789999999963 35999999999999999999999999999999999999999999999999985 334456788
Q ss_pred ceEEEcccCc--cccccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 505 QIGLVSQEPA--LFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~--lf~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
+|+||+|++. ++..|+.+|+.++.. ..+.++..+. +.+.+..+ |++........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~lara 150 (271)
T PRK13638 78 QVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGA 150 (271)
T ss_pred heEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHH
Confidence 9999999985 567799999987521 1122222111 11222222 33333455667899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||++++|++|++++.|+++++...
T Consensus 151 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 151 LVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999875 58999999999999865 999999999999999999988654
No 399
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=370.22 Aligned_cols=218 Identities=27% Similarity=0.495 Sum_probs=184.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 6999999999963 3699999999999999999999999999999999999763 489999999998765 45
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC---CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
...|+.++|++|++.+|+.|++||+.++.... ... .+.++++..++ .+++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAAL-------WDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcC-------chhhHHHhhcChhhCCHHHH
Confidence 66788999999999999899999999864211 111 12222222222 22334456777889999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++||||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
..+
T Consensus 236 ~~~ 238 (253)
T PRK14261 236 FEN 238 (253)
T ss_pred HhC
Confidence 765
No 400
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-40 Score=372.80 Aligned_cols=220 Identities=29% Similarity=0.494 Sum_probs=186.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCC-HH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLK-LR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~-~~ 500 (1350)
.++++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 6899999999963 3699999999999999999999999999999999999986 6999999999987653 44
Q ss_pred HHhcceEEEcccCccccccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhc--CCCCccccccCCCCCCChhHHHHH
Q 000687 501 WLRQQIGLVSQEPALFATTIKENILLGRP---DADLNEIEEAARVANAYSFIIK--LPDGFDTQVGERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~--l~~g~~t~v~~~g~~LSgGqkqri 575 (1350)
.+|++++|++|++.+|+.|++||+.++.. ..+.++..+.+ .+.+.. ++..+.+.+...+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999987632 12333332211 112222 222233456677889999999999
Q ss_pred HHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 576 ~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988767999999999999875 999999999999999999999865
No 401
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.4e-40 Score=380.51 Aligned_cols=213 Identities=25% Similarity=0.409 Sum_probs=180.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999998764 35678999
Q ss_pred EEEccCCCCCc-ccHHHHhccCC--CCCCHHHH----HHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFA-STIYENIAYGH--ESATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~--~~~tdeei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+|+||++.+|. .|++||+.+.. ...+.++. .++++..++. +.+++. ...||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-------~~~~~~----~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-------SKADVR----VALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-------hHhcCc----hhhCCHHHHHHHHHHH
Confidence 99999999885 69999997421 11333332 2333334333 223333 3579999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999864 58999999999999865 999999999999999999999754
No 402
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=369.97 Aligned_cols=218 Identities=23% Similarity=0.456 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~ 1160 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 36999999999999999999999999999999999999999999999999998877644 5788
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCC---CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHE---SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~---~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARAL 1236 (1350)
++|+||++.+|.+ |++||+.++.. ..+.++.. ..+.+++..+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998874 99999986531 12222211 1223344443 444445556678999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1237 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+++|++|||||||++||+.+...+.+.+++.. +|+|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998765 4899999999998775 5999999999999999999998753
No 403
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=368.96 Aligned_cols=218 Identities=32% Similarity=0.516 Sum_probs=182.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++|++|+|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 5899999999963 369999999999999999999999999999999999997 479999999999864 344
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC--C-CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|+.++|++|++.+|+.|++||+.++... . ..+ ++.++++..+++. ......+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHH
Confidence 5678899999999999999999999876321 1 111 1222222222211 111234566789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999866 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 765
No 404
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-40 Score=368.68 Aligned_cols=204 Identities=32% Similarity=0.483 Sum_probs=175.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 36999999999999999999999999999999999999999999999998753 457789
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+ .|++||+.++......+++.++++. + |++......+.+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~---------~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAA---------V--GLADRANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHH---------c--CChhHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 5999999886432112233333333 3 4555556677899999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998874 37999999999999865 9999999999999988754
No 405
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=375.90 Aligned_cols=214 Identities=32% Similarity=0.557 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC--CChHHhhcc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--YNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~l~~lR~~ 1160 (1350)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2369999999999999999999999999999999999999999999999999852 234567899
Q ss_pred cEEEccCC--CCCcccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp--~LF~gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
|+|+||+| .+|..|++||+.++.. ..+. +++.++++..++.++.. .....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-----------KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-----------CChhhCCHHHHHHHHH
Confidence 99999998 4788999999986421 1222 33555666666654322 2345799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|++++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 4899999999999987 4999999999999999999998754
No 406
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.7e-40 Score=362.94 Aligned_cols=207 Identities=32% Similarity=0.570 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999964 3699999999999999999999999999999999999999999999999998765443 46899
Q ss_pred EEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.+|. .|++||+.++... ...++..+. +.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDER-----VREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 5999999876321 122222111 12223333 555556667789999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|+++||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999875 38999999999999876 9999999999999876
No 407
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-40 Score=370.81 Aligned_cols=223 Identities=27% Similarity=0.463 Sum_probs=187.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~ 505 (1350)
.++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 6999999999963 469999999999999999999999999999999999999999999999999988775544 556
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCCH----------HHH--HHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDADL----------NEI--EEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
++|++|++.+|.. |++||+.++...... ... ........+.+.+..+ |++...+..+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999976 999999986321000 000 0001111233445555 777777888899999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999998753 7999999999999866 9999999999999999998
Q ss_pred HHHhc
Q 000687 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87643
No 408
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-40 Score=371.95 Aligned_cols=219 Identities=29% Similarity=0.514 Sum_probs=188.3
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~ 1153 (1350)
+.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 25999999999999999999999999999999999999985 8999999999853 35
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|+.++|+||++.+|..|++||+.++.. .. + ++.+.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999986421 11 2 2345667777776554432 2345567899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeC-----CEEe
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDD-----GKVA 1298 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~-----G~Iv 1298 (1350)
|||++|||||+++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 48999999999999864 899999999 9999
Q ss_pred eecChhHHhhc
Q 000687 1299 ELGSHSHLLKN 1309 (1350)
Q Consensus 1299 E~Gt~~eLl~~ 1309 (1350)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999865
No 409
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=372.48 Aligned_cols=215 Identities=27% Similarity=0.456 Sum_probs=188.7
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcc
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~ 1160 (1350)
-.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999974 369999999999999999999999999999999999999999999999999998888888899
Q ss_pred cEEEccCCCCCc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1161 MAIVPQEPCLFA-STIYENIAYGH-ES---------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~-~~---------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++|+||++.+|. .|+++|+.++. +. ..++.+.++++..++.++.. .....||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-----------QSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCChHHHHH
Confidence 999999998875 69999998652 10 11235667777777765543 3456899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
++||||++++|++|||||||++||+.+...+.+.|++..+ |+|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998855 999999999999999999998
Q ss_pred hhc
Q 000687 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 232 ~~~ 234 (265)
T PRK10253 232 VTA 234 (265)
T ss_pred hhH
Confidence 753
No 410
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-40 Score=364.99 Aligned_cols=209 Identities=35% Similarity=0.497 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
|+++|++++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997411 1469999999999999999999999999999999999999999999999998863 36789
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+||+|++.+|. .|++||+.++... ...++.. ..+.+.+..+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 5999999875321 1111111 1122334444 55555566677999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQ--QGSVSEIGTH 648 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~--~G~i~~~g~~ 648 (1350)
+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999874 38999999999998765 99999999 7999998764
No 411
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-40 Score=341.91 Aligned_cols=220 Identities=31% Similarity=0.485 Sum_probs=191.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
+++++|++-.|+. .++|++|||++++||+++|+|+||+|||||++.|+|+.+|.+|+|.++|+|++..+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 5899999999963 46999999999999999999999999999999999999999999999999999998775 5778
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|+||||.-.+|.. ||+||+.+|......++.. ....++...-+| -+....+.++.+|||||||-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999976 9999999885322211111 111233445566 366677888999999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|-++...... |||.+||++|+|+.+|+.+||..+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999974 6799999999998765 999999999999999999999875
No 412
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-40 Score=375.70 Aligned_cols=225 Identities=28% Similarity=0.478 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCCC--Ch
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~i--~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999964 359999999999999999999999999999999999865 4999999999998643 33
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|++|||.++.. .. + ++++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 467889999999999999999999987521 11 1 233455666666543221 122345668999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+.+|++|||||||++||+++...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999999
Q ss_pred hhcCCCchhHH
Q 000687 1307 LKNNPDGCYAR 1317 (1350)
Q Consensus 1307 l~~~~~g~y~~ 1317 (1350)
.++ +...|.+
T Consensus 269 ~~~-~~~~~~~ 278 (286)
T PRK14275 269 FTN-PKDRMTE 278 (286)
T ss_pred HhC-CCcHHHH
Confidence 875 3444444
No 413
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=372.11 Aligned_cols=221 Identities=22% Similarity=0.428 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHh-hcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~l-R~~ 1160 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988876554 456
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCCCCCH--------------HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChh
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHESATE--------------SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~td--------------eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
++|+||+|.+|.+ |++||+.++.....+ .+..+. ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 999999975311000 000000 11123334443 4555556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecC
Q 000687 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1226 QrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt 1302 (1350)
||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999988643 7899999999999865 99999999999999999
Q ss_pred hhHHhhc
Q 000687 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
++++...
T Consensus 238 ~~~~~~~ 244 (255)
T PRK11300 238 PEEIRNN 244 (255)
T ss_pred HHHHhhC
Confidence 9998653
No 414
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-40 Score=360.50 Aligned_cols=201 Identities=33% Similarity=0.540 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999632 2 39999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCCCCCcc-cHHHHhccCCC-C-----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE-S-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~-~-----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |++||+.++.. . .+++++.++++..++.+.....| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 12446778888888877665543 4799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
++++|++|||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999866 9999999999998865
No 415
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=369.85 Aligned_cols=218 Identities=29% Similarity=0.454 Sum_probs=190.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~l 1154 (1350)
.+.+++++++|.. .++|+|+||+|+|||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999953 3699999999999999999999999999999999999987 79999999999864 344
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC-----CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE-----SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-----~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++++|+||+|.+|..|++|||.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987531 1123467778888887655432 2345667899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEe--------CCEEeee
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID--------DGKVAEL 1300 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~--------~G~IvE~ 1300 (1350)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 99999996 8999999
Q ss_pred cChhHHhhc
Q 000687 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999865
No 416
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.8e-40 Score=365.23 Aligned_cols=208 Identities=28% Similarity=0.421 Sum_probs=178.6
Q ss_pred cEEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---h
Q 000687 1082 EVELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---L 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---l 1157 (1350)
.|+++||+++|+.... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974321 25999999999999999999999999999999999999999999999999998877653 2
Q ss_pred -hcccEEEccCCCCCcc-cHHHHhccCC--CCC----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1158 -RRHMAIVPQEPCLFAS-TIYENIAYGH--ESA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 -R~~i~~VpQdp~LF~g-TIreNL~~~~--~~~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
+++++|+||+|.+|.. |++||+.++. ... ..+++.++++..++.++.... ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3689999999998875 9999997531 111 134566677777776655443 34799999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEeCCEEeee
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~G~IvE~ 1300 (1350)
++|||||+.+|++|||||||++||+.+...+.+.|++.. .|+|||+|||+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999864 37899999999999988999999999999874
No 417
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=368.94 Aligned_cols=217 Identities=29% Similarity=0.462 Sum_probs=183.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 5899999999973 3599999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEcccCcc-ccccHHHHhhcCCCCC--CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc-
Q 000687 507 GLVSQEPAL-FATTIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAML- 582 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~~Ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~- 582 (1350)
+|++|++.+ +..|++||+.++.... +.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 5679999998864211 1111111 112223332 4554556667899999999999999999
Q ss_pred -----cCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 583 -----KNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 583 -----~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 48999999999999875 99999999999999999988864
No 418
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.6e-40 Score=371.48 Aligned_cols=212 Identities=25% Similarity=0.418 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999964 36999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEccCCC-CCcccHHHHhccCCCC----------CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 1163 IVPQEPC-LFASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~-LF~gTIreNL~~~~~~----------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
|+||+|. .+..|+++|+.++... ..++++.++++..++.+... .....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLAD-----------RDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHH
Confidence 9999995 4568999999875210 11234566666666654432 345679999999999
Q ss_pred HHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhh
Q 000687 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 LARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~ 1308 (1350)
||||++.+|+++||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 4789999999999995 599999999999999999999864
No 419
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-40 Score=373.42 Aligned_cols=219 Identities=32% Similarity=0.529 Sum_probs=182.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--CCHHHHhc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS--LKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~--~~~~~~r~ 504 (1350)
+|+++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++
T Consensus 1 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 1 ILETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred CEEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHh
Confidence 3789999999963 2359999999999999999999999999999999999999999999999999852 23456788
Q ss_pred ceEEEcccC--ccccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 505 QIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~--~lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
.|+|++|+| .+|..|++||+.++... .+.++..+. +.+.+..+ |++......+.+||||||||++||||
T Consensus 79 ~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~lara 151 (275)
T PRK13639 79 TVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKR-----VKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGI 151 (275)
T ss_pred heEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999998 57788999999875321 222222111 12223333 44444455677899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|++|||||||++||+.+...+.+.|.++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 152 LAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999875 48999999999999875 999999999999999999998753
No 420
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.2e-40 Score=363.55 Aligned_cols=213 Identities=32% Similarity=0.497 Sum_probs=181.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 6999999999963 3699999999999999999999999999999999999999999999999999888887788899
Q ss_pred EEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 507 GLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+.|++||+.++.......... ..+.+.+..+ |+. +.....+.+||||||||++|||||+++|
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-----AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-----HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999889999998642100000000 0112344444 553 4567778899999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEe-CCEEEEecChH
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQ-QGSVSEIGTHD 649 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~D~i~vl~-~G~i~~~g~~~ 649 (1350)
++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+..||+|++|+ ++..+++|+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999874 3889999999999998899999994 67778888885
No 421
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=367.79 Aligned_cols=218 Identities=29% Similarity=0.510 Sum_probs=184.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC-CCCHH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK-SLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~-~~~~~ 500 (1350)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 5899999999963 3699999999999999999999999999999999999986 5999999999985 44566
Q ss_pred HHhcceEEEcccCccccccHHHHhhcCCCC--CC-HH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 501 WLRQQIGLVSQEPALFATTIKENILLGRPD--AD-LN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~~-~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
.+|+.++|++|++.+|..|++||+.++... .. .+ ++.++++..++.+ ++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHH
Confidence 788899999999999999999999876321 11 11 1222233333222 2234456677899999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999998886
Q ss_pred hc
Q 000687 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 422
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.4e-40 Score=379.03 Aligned_cols=212 Identities=22% Similarity=0.423 Sum_probs=184.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |++|||.+... ..+ .+++.++++..++.+ .......+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRP-----------EQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-----------HhcCchhhCCHHHHHHHHHHHH
Confidence 99999999876 99999975321 122 233444444444443 3344556899999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.++
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999876 999999999999999999999764
No 423
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-40 Score=369.60 Aligned_cols=225 Identities=29% Similarity=0.503 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--i~l 1154 (1350)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 36999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHhhcccEEEccCCCCCcc-cHHHHhccCCC--CC-CHHHHHHH----HHHhcchHHHhcCCCCccccccCCCCCCChhH
Q 000687 1155 KSLRRHMAIVPQEPCLFAS-TIYENIAYGHE--SA-TESEIIEA----ARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~~-tdeei~~a----l~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
..+|++++|+||+|.+|.. |++||+.++.. .. .+++..+. ++..++.+.+ ++.++ ....+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~----~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLK----TPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhc----CCcccCCHHH
Confidence 5788999999999999884 99999986421 11 23333332 3334433222 22333 3456799999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhH
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~e 1305 (1350)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999875 89999999999999999999
Q ss_pred HhhcCCCchhHH
Q 000687 1306 LLKNNPDGCYAR 1317 (1350)
Q Consensus 1306 Ll~~~~~g~y~~ 1317 (1350)
++.. +...|.+
T Consensus 234 ~~~~-~~~~~~~ 244 (252)
T PRK14272 234 LFTN-PRDERTE 244 (252)
T ss_pred HHhC-cCcHHHH
Confidence 9876 4544433
No 424
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=363.89 Aligned_cols=209 Identities=34% Similarity=0.571 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .+ .|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 22 39999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEccCCCCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGH-ES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~-~~-----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||+|.+|.+ |++||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 9999998642 11 12446788888888877766654 4699999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998743 8899999999999865 899999999999999999999865
No 425
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.9e-40 Score=362.17 Aligned_cols=205 Identities=40% Similarity=0.656 Sum_probs=172.9
Q ss_pred EEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000687 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988777788899999
Q ss_pred EcccCc--cccccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 509 VSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 509 v~Q~~~--lf~~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|++. ++..|++||+.++... .+..+..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999983 5678999999875321 12122111 112333333 555556677789999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGS 641 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~ 641 (1350)
|++|||||||++||+.+++.+.+.|.++. +++|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998875 48999999999999987 99999999985
No 426
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=9.9e-40 Score=363.71 Aligned_cols=212 Identities=33% Similarity=0.514 Sum_probs=173.4
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh---HHhh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l---~~lR 1158 (1350)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 1269999999999999999999999999999999999999999999999999988763 5788
Q ss_pred cccEEEccCC--CCC-cccHHHHhccCC----CCCCHHHHHHHHHHhcchHHHhcCCCCcc-ccccCCCCCCChhHHHHH
Q 000687 1159 RHMAIVPQEP--CLF-ASTIYENIAYGH----ESATESEIIEAARLANADKFISSLPDGYK-TFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp--~LF-~gTIreNL~~~~----~~~tdeei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+| .++ ..|+++|+.++. +...+++...++ .+.+..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 579999997531 111112111110 1222222 332 234455678999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeec
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~G 1301 (1350)
+|||||+.+|+||||||||++||+.+...+.+.|++..+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 899999999999987 59999999999999865
No 427
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-40 Score=378.18 Aligned_cols=217 Identities=23% Similarity=0.403 Sum_probs=187.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|++ ..+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+++
T Consensus 2 ~l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~i 77 (301)
T TIGR03522 2 SIRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNI 77 (301)
T ss_pred EEEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhce
Confidence 3789999999963 469999999999999999999999999999999999999999999999999876 345678899
Q ss_pred EEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
||+||++.+|.. |++||+.+.... ...++..+. +.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 g~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~ 150 (301)
T TIGR03522 78 GYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIH 150 (301)
T ss_pred EEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 999999999876 999999864211 111221111 23344444 66666777788999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+++..|+++++.+.
T Consensus 151 ~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 151 DPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998778999999999999876 999999999999999999998654
No 428
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=7.2e-40 Score=362.77 Aligned_cols=204 Identities=27% Similarity=0.464 Sum_probs=174.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH---hhc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~---lR~ 1159 (1350)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999953 236999999999999999999999999999999999999999999999999998776543 688
Q ss_pred ccEEEccCCCC-CcccHHHHhccCC--CCCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1160 HMAIVPQEPCL-FASTIYENIAYGH--ESATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~L-F~gTIreNL~~~~--~~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
.++|+||+|.+ +..|++||+.++. ...+++ ++.++++..++.+...+ ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHHH
Confidence 99999999986 4679999998752 122333 34455666666554433 346799999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEee
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE 1299 (1350)
|||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999864 47899999999999976 89999999999863
No 429
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=371.94 Aligned_cols=220 Identities=29% Similarity=0.531 Sum_probs=183.8
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000687 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
...|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 37 ~~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 37 ETVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 346999999999963 369999999999999999999999999999999999997 689999999999864 3
Q ss_pred CHHHHhcceEEEcccCccccccHHHHhhcCCCC--CC---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRPD--AD---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
+...++++++||+|++.+|..|++||+.++... .. .+++.++++..++.. .+....++++.+||||||
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LSgGe~ 186 (285)
T PRK14254 114 DPVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWD-------EVKDQLDSSGLDLSGGQQ 186 (285)
T ss_pred chHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCc-------hhHHHHhCCcccCCHHHH
Confidence 455678899999999999988999999875321 11 122333333332211 112345677789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEE-EEeCCEEEEecChHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVA-VLQQGSVSEIGTHDE 650 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~-vl~~G~i~~~g~~~~ 650 (1350)
||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998767899999999999876 99975 579999999999999
Q ss_pred HHhc
Q 000687 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+..+
T Consensus 267 ~~~~ 270 (285)
T PRK14254 267 IFEN 270 (285)
T ss_pred HHhC
Confidence 8765
No 430
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.1e-40 Score=363.60 Aligned_cols=210 Identities=26% Similarity=0.478 Sum_probs=181.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||++.|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCCCCcccHHHHhccCC---CC-CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1162 AIVPQEPCLFASTIYENIAYGH---ES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~---~~-~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
+|+||+|.+|..|++||+.++. .. ..++++.+.++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999998631 11 12233445555555432 2234556789999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhhcCEEEEEe-CCEEeeecChh
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVID-DGKVAELGSHS 1304 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~-~G~IvE~Gt~~ 1304 (1350)
++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999864 3889999999999998999999995 67777889885
No 431
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=368.38 Aligned_cols=220 Identities=32% Similarity=0.513 Sum_probs=181.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~--~~~ 499 (1350)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 5899999999963 36999999999999999999999999999999999999874 8999999999864 344
Q ss_pred HHHhcceEEEcccCccccc-cHHHHhhcCCCC--C-CHHHHHHHHHHHchHHHHhcC--CCCccccccCCCCCCChhHHH
Q 000687 500 RWLRQQIGLVSQEPALFAT-TIKENILLGRPD--A-DLNEIEEAARVANAYSFIIKL--PDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~v~~~g~~LSgGqkq 573 (1350)
..+|+.++|++|++.+|.. |++||+.++... . ..++..+.+.. .+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~-----~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAER-----SLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHH-----HHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678899999999999875 999999865321 1 22222222211 11111 111222334556789999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999886 9999999999999999999997
Q ss_pred hc
Q 000687 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
..
T Consensus 236 ~~ 237 (252)
T PRK14272 236 TN 237 (252)
T ss_pred hC
Confidence 65
No 432
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=367.32 Aligned_cols=217 Identities=29% Similarity=0.496 Sum_probs=183.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC------CCCHH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK------SLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~------~~~~~ 500 (1350)
+|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .....
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 4789999999963 35999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhcceEEEcccCccccc-cHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 501 WLRQQIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~ 576 (1350)
.+|++|+|++|++.+|.+ |++||+.++.. ....++.. ..+.+.+..+ |++..+.....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 678899999999999875 99999975311 11112211 1223445454 6666677778899999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||||++.+|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999999875 48999999999999865 99999999999999999888653
No 433
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=369.74 Aligned_cols=219 Identities=29% Similarity=0.484 Sum_probs=184.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
+.|+++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46999999999963 3599999999999999999999999999999999999985 48999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCC---CCH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD---ADL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...++++++||+|++.+|+.|++||+.++... ... +.+.++++..++.+++ ....+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 56778899999999999999999999875321 111 1233444444443222 223456678999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-----CCEEEEe
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ-----QGSVSEI 645 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~-----~G~i~~~ 645 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999876 99999998 5999999
Q ss_pred cChHHHHhc
Q 000687 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999998765
No 434
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=6.3e-40 Score=348.11 Aligned_cols=172 Identities=42% Similarity=0.760 Sum_probs=162.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+++...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999743 246999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEccCCCCCcccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~I 1242 (1350)
|++|+|.+|.+|++||+ ||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhhcCEEEEEeCCEE
Q 000687 1243 MLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~G~I 1297 (1350)
|||||||++||+.+...+.+.|++.. +|+|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998865 48999999999999988999999999975
No 435
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=369.80 Aligned_cols=221 Identities=30% Similarity=0.494 Sum_probs=187.1
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC---
Q 000687 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK--- 495 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~--- 495 (1350)
..+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999963 3699999999999999999999999999999999999875 7999999998774
Q ss_pred -CCCHHHHhcceEEEcccCccccccHHHHhhcCCC--CCC-----HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCC
Q 000687 496 -SLKLRWLRQQIGLVSQEPALFATTIKENILLGRP--DAD-----LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQL 567 (1350)
Q Consensus 496 -~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~L 567 (1350)
......+++.++|++|++.+|.+|++||+.++.. ... .+++.++++.+++.+ ++.+..+....+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccC
Confidence 2344577889999999999998999999987531 111 123333443333322 3344566778899
Q ss_pred ChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988778999999999999865 9999999999999999
Q ss_pred ChHHHHhc
Q 000687 647 THDELIAK 654 (1350)
Q Consensus 647 ~~~~l~~~ 654 (1350)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99998765
No 436
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=6.1e-40 Score=381.85 Aligned_cols=213 Identities=26% Similarity=0.435 Sum_probs=182.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
-|+++||+++|+. ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ..+|++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 36999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEccCCCCC-cccHHHHhccCCC--CCCHHHH----HHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLF-ASTIYENIAYGHE--SATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF-~gTIreNL~~~~~--~~tdeei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
+|+||++.+| ..|++||+.+... ..+.++. .++++..+ +++..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999886 5699999985321 1232222 23333333 333444444 479999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+...+++.|++.. +|+|||++||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999965 999999999999999999999764
No 437
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-39 Score=359.35 Aligned_cols=210 Identities=30% Similarity=0.471 Sum_probs=185.4
Q ss_pred EEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH----HHHhc
Q 000687 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL----RWLRQ 504 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~----~~~r~ 504 (1350)
.+.|+.|+|+.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998876542 24567
Q ss_pred ceEEEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 505 QIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
.++|++|+|.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998899999998754 344556677788888888888999999999999999999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHH--HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000687 585 PAILLLDEATSALDSESEKLVQE--ALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~ 641 (1350)
|++|||||||++||+.+...+.+ .++.+. .++|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 455543 3799999999999988899999999884
No 438
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=370.16 Aligned_cols=214 Identities=27% Similarity=0.442 Sum_probs=184.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
-.|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999973 359999999999999999999999999999999999999999999999999988888888889
Q ss_pred eEEEcccCcccc-ccHHHHhhcCCCCC-------CH---HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 506 IGLVSQEPALFA-TTIKENILLGRPDA-------DL---NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~~Ni~~g~~~~-------~~---~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
++|++|++.+|. .|++||+.++.... .. +++.++++.. |++......+.+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT-----------GITHLADQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCChHHHHH
Confidence 999999998875 59999998763110 11 1222233322 44444566778999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
++||||++++|++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998865 999999999999999999887
Q ss_pred Hh
Q 000687 652 IA 653 (1350)
Q Consensus 652 ~~ 653 (1350)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 64
No 439
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-40 Score=369.39 Aligned_cols=223 Identities=30% Similarity=0.483 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--i~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 369999999999999999999999999999999999975 4 58999999999864 345
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCC--CC-C----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|+++|+.++.. .. . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 23445556666554332 2223445678999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999999
Q ss_pred hhcCCCchh
Q 000687 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
... +...+
T Consensus 235 ~~~-~~~~~ 242 (252)
T PRK14255 235 FLN-PKEKE 242 (252)
T ss_pred hcC-CCChH
Confidence 865 34433
No 440
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=383.65 Aligned_cols=212 Identities=30% Similarity=0.504 Sum_probs=181.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHHH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~~ 502 (1350)
+|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +....
T Consensus 1 ~l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~ 74 (352)
T PRK11144 1 MLEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPE 74 (352)
T ss_pred CeEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchh
Confidence 3677 99999963 1 23 89999999999999999999999999999999999999999999998653 23456
Q ss_pred hcceEEEcccCcccc-ccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 503 RQQIGLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
+++++||+|++.+|+ .|++||+.++......+++.+.++.. |++........+||||||||++|||||
T Consensus 75 ~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qRvalaraL 143 (352)
T PRK11144 75 KRRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALL-----------GIEPLLDRYPGSLSGGEKQRVAIGRAL 143 (352)
T ss_pred hCCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHc-----------CCchhhhCCcccCCHHHHHHHHHHHHH
Confidence 789999999999996 49999999875432233333333333 555556667789999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998753 7999999999998865 9999999999999999999998764
No 441
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=367.44 Aligned_cols=218 Identities=28% Similarity=0.533 Sum_probs=183.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 5899999999963 3699999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC---CCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+++.++|++|++.+|..|++||+.++... ...++ +.++++..++.+. .++..+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDE-------VKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCch-------hHHHHhCChhhcCHHHH
Confidence 4678899999999999999999999875311 11111 2233333332221 12345677889999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14262 233 VER 235 (250)
T ss_pred HhC
Confidence 764
No 442
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.3e-40 Score=361.37 Aligned_cols=202 Identities=36% Similarity=0.568 Sum_probs=170.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .++
T Consensus 1 ~l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (214)
T TIGR02673 1 MIEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLR 78 (214)
T ss_pred CEEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 3789999999952 24699999999999999999999999999999999999999999999999999876543 467
Q ss_pred cceEEEcccCcccc-ccHHHHhhcCCCC--CCH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 504 QQIGLVSQEPALFA-TTIKENILLGRPD--ADL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~ 576 (1350)
+.++|++|+|.+|. .|++||+.++... ... +++.++++.. |+.........+||||||||++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrl~ 147 (214)
T TIGR02673 79 RRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQV-----------GLEHKADAFPEQLSGGEQQRVA 147 (214)
T ss_pred hheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHHH
Confidence 89999999999986 5999999875221 111 2223333333 3333344455789999999999
Q ss_pred HHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000687 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGS 641 (1350)
Q Consensus 577 iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~ 641 (1350)
|||||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 148 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 148 IARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999999999875 48999999999999876 99999999985
No 443
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=380.27 Aligned_cols=228 Identities=19% Similarity=0.311 Sum_probs=188.9
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC----CCccEEEECCccCCCCChHHh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE----PSSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~----p~~G~I~idG~di~~i~l~~l 1157 (1350)
|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|++||+++.+++.+.+
T Consensus 4 L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (330)
T PRK15093 4 LDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRER 83 (330)
T ss_pred EEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 78999999996432 2369999999999999999999999999999999999986 589999999999998887665
Q ss_pred h----cccEEEccCCCC--C-cccHHHHhccC---C---C----C--CCHHHHHHHHHHhcchHHHhcCCCCccccccCC
Q 000687 1158 R----RHMAIVPQEPCL--F-ASTIYENIAYG---H---E----S--ATESEIIEAARLANADKFISSLPDGYKTFVGER 1218 (1350)
Q Consensus 1158 R----~~i~~VpQdp~L--F-~gTIreNL~~~---~---~----~--~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~ 1218 (1350)
+ ++|+||||+|.. + ..||.+|+... . . . ...+++.++++.+++.+.-. .....
T Consensus 84 ~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~~ 155 (330)
T PRK15093 84 RKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRSF 155 (330)
T ss_pred HHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhCC
Confidence 3 479999999963 3 35899988631 0 0 0 01235667777777753211 11233
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCC
Q 000687 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDG 1295 (1350)
Q Consensus 1219 G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G 1295 (1350)
...||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.+ |.|+|+|||+++.+.. ||||+||++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 467999999999999999999999999999999999999999999998753 8999999999999965 9999999999
Q ss_pred EEeeecChhHHhhcCCCchhHHHH
Q 000687 1296 KVAELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1296 ~IvE~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
+|+|.|++++++++ +...|.+.+
T Consensus 236 ~ive~g~~~~i~~~-p~~~y~~~l 258 (330)
T PRK15093 236 QTVETAPSKELVTT-PHHPYTQAL 258 (330)
T ss_pred EEEEECCHHHHHhC-CCCHHHHHH
Confidence 99999999999876 667787643
No 444
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=363.64 Aligned_cols=210 Identities=32% Similarity=0.596 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+. ++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 37999999999999999999999999999999999999999999999999987654 368999
Q ss_pred EEccCCCCCc-ccHHHHhccCCCC--C----CHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHES--A----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~----tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+|. .|++||+.++... . .++++.++++..++.+++... ...||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999885 7999999864321 1 233456677777776665443 35799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
++++|++|+|||||++||+.+.+.+.+.|++..+ |+|+|++||++..+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998653 8999999999999875 999999999999999999999865
No 445
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.3e-39 Score=366.86 Aligned_cols=227 Identities=25% Similarity=0.404 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc-----CCCCChHH
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD-----IRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~i~l~~ 1156 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999999 87776554
Q ss_pred ----hhcccEEEccCCC--CC-cccHHHHhccCC---CCCCHHHHHHHHHHhcchHHHhcCCCCcc-ccccCCCCCCChh
Q 000687 1157 ----LRRHMAIVPQEPC--LF-ASTIYENIAYGH---ESATESEIIEAARLANADKFISSLPDGYK-TFVGERGVQLSGG 1225 (1350)
Q Consensus 1157 ----lR~~i~~VpQdp~--LF-~gTIreNL~~~~---~~~tdeei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgG 1225 (1350)
+|+.++||||+|. ++ ..|+++|+.+.. ......++.+ .++++++.+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 33 348888886421 1111122211 123445544 332 3455677889999
Q ss_pred HHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecC
Q 000687 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1226 QrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt 1302 (1350)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ |.|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988653 789999999999997 599999999999999999
Q ss_pred hhHHhhcCCCchhHHHH
Q 000687 1303 HSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~ 1319 (1350)
++++..+ +...|.+.+
T Consensus 236 ~~~~~~~-~~~~~~~~~ 251 (258)
T PRK11701 236 TDQVLDD-PQHPYTQLL 251 (258)
T ss_pred HHHHhcC-CCCHHHHHH
Confidence 9999866 344555443
No 446
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.4e-39 Score=369.84 Aligned_cols=232 Identities=26% Similarity=0.449 Sum_probs=186.2
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH
Q 000687 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++||+++|+.. ...++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 58999999999631 124699999999999999999999999999999999999999999999999998765556
Q ss_pred HHhcceEEEcccCc--cccc-cHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChhHHH
Q 000687 501 WLRQQIGLVSQEPA--LFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~--lf~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgGqkq 573 (1350)
..++.++||+|++. ++.. |+.+|+.++.. .....+..+ .+.+.+..+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66778999999985 4443 89999875321 111111111 112222222 332 2233455789999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|++|||||+.+|+||||||||++||+++.+.+.+.|.++. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999999875 38999999999999986 99999999999999999999
Q ss_pred HHhccCCcHHHHHHH
Q 000687 651 LIAKGENGVYAKLIR 665 (1350)
Q Consensus 651 l~~~~~~~~~~~l~~ 665 (1350)
+...+....+++++.
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 237 VLASPLHELTKRLIA 251 (267)
T ss_pred HhcCCCCHHHHHHHH
Confidence 987644455555654
No 447
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=371.75 Aligned_cols=219 Identities=28% Similarity=0.471 Sum_probs=182.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 46999999999963 359999999999999999999999999999999999864 4999999999988643 3
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCC--C-CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...+|++++||+|++.+|..|++||+.++... . +.+ ++.++++..++.+ ++.......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHH
Confidence 34578899999999999988999999886321 1 111 1222222222211 12233456778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999865 99999999999999999999
Q ss_pred HHhc
Q 000687 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+..+
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 9765
No 448
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-40 Score=360.33 Aligned_cols=201 Identities=23% Similarity=0.482 Sum_probs=171.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 369999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCCCCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..++.+. ......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976421 111 2234445555554433 334456799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeec
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~G 1301 (1350)
++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999998864 57899999999999865 9999999999999865
No 449
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.2e-40 Score=361.04 Aligned_cols=206 Identities=32% Similarity=0.510 Sum_probs=171.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r~ 504 (1350)
|+++|++++|++. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 369999999999999999999999999999999999999999999999999987654 34678
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
.++||+|++.+|.. |++||+.++... .+.++..+. +.+.+..+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKR-----VPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999875 999999875321 122221111 12223333 444445556678999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i 642 (1350)
+.+|+++||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 58999999999999976 999999999974
No 450
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-39 Score=360.71 Aligned_cols=209 Identities=32% Similarity=0.525 Sum_probs=174.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|
T Consensus 1 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 78 (222)
T PRK10908 1 MIRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLR 78 (222)
T ss_pred CEEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHH
Confidence 3789999999952 24699999999999999999999999999999999999999999999999999876544 367
Q ss_pred cceEEEcccCccc-cccHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 504 QQIGLVSQEPALF-ATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf-~~ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
+.++|++|+|.++ ..|++||+.++.. ..+.++..+.+ .+.+..+ |+.........+||||||||++||||
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lara 151 (222)
T PRK10908 79 RQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRV-----SAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARA 151 (222)
T ss_pred hheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHH
Confidence 8999999999875 5699999987531 12222222211 1222222 44444556678999999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~ 644 (1350)
++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 152 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 152 VVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999874 47999999999999976 99999999999863
No 451
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=375.35 Aligned_cols=219 Identities=28% Similarity=0.499 Sum_probs=188.2
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000687 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--i~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999964 369999999999999999999999999999999999986 689999999999865 34
Q ss_pred hHHhhcccEEEccCCCCCcccHHHHhccCCCC-------------------CCHHHHHHHHHHhcchHHHhcCCCCcccc
Q 000687 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHES-------------------ATESEIIEAARLANADKFISSLPDGYKTF 1214 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-------------------~tdeei~~al~~a~l~~~I~~lp~Gldt~ 1214 (1350)
...+|++++||||++.+|++|++||+.++... ..++++.++++.+++.+ ++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhHH
Confidence 66788999999999999999999999865210 01234555566655533 33344
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHhh-cCEE-EEE
Q 000687 1215 VGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVI-AVI 1292 (1350)
Q Consensus 1215 vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI-~Vl 1292 (1350)
+...+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56667889999999999999999999999999999999999999999999998777899999999999865 9997 567
Q ss_pred eCCEEeeecChhHHhhc
Q 000687 1293 DDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1293 ~~G~IvE~Gt~~eLl~~ 1309 (1350)
++|++++.|+++++++.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999865
No 452
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=366.55 Aligned_cols=227 Identities=27% Similarity=0.475 Sum_probs=190.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEEC------CccCCCCChH
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMID------GKDIRKYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id------G~di~~i~l~ 1155 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++..++..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5899999999964 369999999999999999999999999999999999999998666555 5777777778
Q ss_pred HhhcccEEEccCCCCCcc-cHHHHhccCCC--CC-CHHH----HHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHH
Q 000687 1156 SLRRHMAIVPQEPCLFAS-TIYENIAYGHE--SA-TESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~~-tdee----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
.+|++++|+||+|.+|.+ |+++|+.++.. .. ++++ +.++++..++++++. ......+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999975 99999986522 11 2223 455566666644321 123345667999999
Q ss_pred HHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHH-hhcCEEEEEeCCEEeeecChhHH
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti-~~~DrI~Vl~~G~IvE~Gt~~eL 1306 (1350)
||++||||++.+|++|||||||++||..++..+.+.|++..+++|+|+|||+++.+ ..||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999887789999999999999 45999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 000687 1307 LKNNPDGCYARMI 1319 (1350)
Q Consensus 1307 l~~~~~g~y~~l~ 1319 (1350)
.+. +...|.+.+
T Consensus 240 ~~~-~~~~~~~~~ 251 (257)
T PRK14246 240 FTS-PKNELTEKY 251 (257)
T ss_pred HhC-CCcHHHHHH
Confidence 876 455565443
No 453
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=367.58 Aligned_cols=218 Identities=30% Similarity=0.534 Sum_probs=181.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~~ 499 (1350)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 5899999999964 3599999999999999999999999999999999999974 79999999999853 345
Q ss_pred HHHhcceEEEcccCcccc-ccHHHHhhcCCCC---CCHHH----HHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 500 RWLRQQIGLVSQEPALFA-TTIKENILLGRPD---ADLNE----IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~g~~~---~~~~~----~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
..+|+.++|++|++.+|. .|++||+.++... .+.++ +.++++..++.+ +........+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWN-------EVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHH
Confidence 577889999999999987 4999999875321 11111 222222222211 12234566778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe------CCEEEE
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ------QGSVSE 644 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~------~G~i~~ 644 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988778999999999999865 99999997 899999
Q ss_pred ecChHHHHhc
Q 000687 645 IGTHDELIAK 654 (1350)
Q Consensus 645 ~g~~~~l~~~ 654 (1350)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998764
No 454
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.2e-39 Score=346.01 Aligned_cols=172 Identities=45% Similarity=0.730 Sum_probs=161.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. ..++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccCccccccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000687 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred eEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000687 588 LLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 588 lllDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~D~i~vl~~G~i 642 (1350)
|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48999999999999888999999999974
No 455
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.9e-40 Score=361.42 Aligned_cols=201 Identities=33% Similarity=0.553 Sum_probs=171.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC--CChHHhhcc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--YNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--i~l~~lR~~ 1160 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 578999999964 369999999999999999999999999999999999999999999999999853 455678899
Q ss_pred cEEEccCCCCCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000687 1161 MAIVPQEPCLFA-STIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~---~~tde----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaL 1232 (1350)
++|+||+|.+|. .|++||+.++.. ..+.+ ++.++++..++.+. +.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADK-----------ADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhhCccccCHHHHHHHHH
Confidence 999999999886 699999986521 22222 33444444444433 334446899999999999
Q ss_pred HHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEE
Q 000687 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~I 1297 (1350)
|||++++|++|||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|+|
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 48999999999999965 999999999975
No 456
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.5e-39 Score=366.65 Aligned_cols=218 Identities=26% Similarity=0.431 Sum_probs=183.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCee-----CCCCCHHH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHD-----IKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~-----~~~~~~~~ 501 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 6999999999964 369999999999999999999999999999999999999999999999998 77666543
Q ss_pred ----HhcceEEEcccCc--ccc-ccHHHHhhcCC---CCCCHHHHHHHHHHHchHHHHhcCCCCcc-ccccCCCCCCChh
Q 000687 502 ----LRQQIGLVSQEPA--LFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFD-TQVGERGVQLSGG 570 (1350)
Q Consensus 502 ----~r~~i~~v~Q~~~--lf~-~ti~~Ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~v~~~g~~LSgG 570 (1350)
+++.++||+|++. ++. .|+.+|+.+.. ...+..+..+ .+.+++..+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 443 48899986421 1111122211 234556666 454 4677888999999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988743 8899999999999975 99999999999999999
Q ss_pred hHHHHhc
Q 000687 648 HDELIAK 654 (1350)
Q Consensus 648 ~~~l~~~ 654 (1350)
++++..+
T Consensus 236 ~~~~~~~ 242 (258)
T PRK11701 236 TDQVLDD 242 (258)
T ss_pred HHHHhcC
Confidence 9999765
No 457
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=378.66 Aligned_cols=228 Identities=25% Similarity=0.402 Sum_probs=183.9
Q ss_pred eEEEEEEEEECCCC-CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCcEEEECCeeCCCCCHHH
Q 000687 427 LIELKHVDFSYPSR-PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD----PTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++|++++|+.. ....+|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.++|+++..++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999632 12469999999999999999999999999999999999986 58999999999998887665
Q ss_pred Hh----cceEEEcccCc--ccc-ccHHHHhhcCCC---CC-----CHHHHHHHHHHHchHHHHhcCCCCcc---ccccCC
Q 000687 502 LR----QQIGLVSQEPA--LFA-TTIKENILLGRP---DA-----DLNEIEEAARVANAYSFIIKLPDGFD---TQVGER 563 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~--lf~-~ti~~Ni~~g~~---~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~---t~v~~~ 563 (1350)
++ +.|+||+|+|. ++. .||.+|+..... .. ..++.. ..+.+.+..+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRK-----RRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHH-----HHHHHHHHHC--CCCChHHHHhCC
Confidence 43 47999999996 333 489999864211 00 101111 1122334333 443 234667
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCC
Q 000687 564 GVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQG 640 (1350)
Q Consensus 564 g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G 640 (1350)
+.+|||||||||+|||||+.+|+||||||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 789999999999999999999999999999999999999999999998853 8999999999999976 9999999999
Q ss_pred EEEEecChHHHHhccCCcHHHH
Q 000687 641 SVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~~~~~~~~~ 662 (1350)
+|++.|+.+++..++ ...|.+
T Consensus 236 ~ive~g~~~~i~~~p-~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTP-HHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCC-CCHHHH
Confidence 999999999998764 334543
No 458
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=367.42 Aligned_cols=219 Identities=32% Similarity=0.494 Sum_probs=184.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 37999999999963 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC-----CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA-----DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
...+|++|+|++|++.+|+.|+.||+.++.... ..+.+.++++.+++.+.+ .......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 456788999999999999889999998863211 112233334444433222 23455677899999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEE
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ---------QGSVS 643 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~---------~G~i~ 643 (1350)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778999999999999865 99999997 89999
Q ss_pred EecChHHHHhc
Q 000687 644 EIGTHDELIAK 654 (1350)
Q Consensus 644 ~~g~~~~l~~~ 654 (1350)
+.|+.+++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999998765
No 459
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=368.77 Aligned_cols=218 Identities=32% Similarity=0.494 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--i~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999963 3699999999999999999999999999999999999864 58999999999864 344
Q ss_pred HHhhcccEEEccCCCCCcccHHHHhccCCCC-----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++++|+||++.+|..|+++||.++... ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999989999999875311 123445666777777554432 2334567899999999
Q ss_pred HHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCceEEEEccCchHHh-hcCEEEEEe---------CCEEee
Q 000687 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVID---------DGKVAE 1299 (1350)
Q Consensus 1230 laLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~---------~G~IvE 1299 (1350)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+. .||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 9999999999999999999999999999999999999877899999999999985 599999997 899999
Q ss_pred ecChhHHhhc
Q 000687 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|+++++...
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 460
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=382.31 Aligned_cols=212 Identities=27% Similarity=0.441 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----ChHHhh
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i----~l~~lR 1158 (1350)
|++ |++++|... .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~~----~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGDL----CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCCE----EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 999999631 23 99999999999999999999999999999999999999999999998653 244568
Q ss_pred cccEEEccCCCCCc-ccHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1159 RHMAIVPQEPCLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
++++||||++.+|. .|++||+.++.....++++.++++..++.++.... ..+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRY-----------PGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHHHHH
Confidence 89999999999996 59999999875444556777788888776655443 3579999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCC
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPD 1312 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~ 1312 (1350)
++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++..+ |.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~-p~ 221 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS-SA 221 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC-cc
Confidence 99999999999999999999999999998753 7899999999998865 999999999999999999999976 44
No 461
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.5e-38 Score=405.71 Aligned_cols=108 Identities=30% Similarity=0.498 Sum_probs=95.3
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHhccCC---CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHh
Q 000687 1210 GYKT-FVGERGVQLSGGQKQRVAIARAFVRKA---EIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1210 Gldt-~vge~G~~LSgGQrQrlaLARALlr~p---~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~ 1284 (1350)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+...+.+.|+++. +|.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5554 367777889999999999999999999 9999999999999999999999999875 5899999999999999
Q ss_pred hcCEEEEE------eCCEEeeecChhHHhhcCCCchhHHH
Q 000687 1285 NAHVIAVI------DDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1285 ~~DrI~Vl------~~G~IvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
.||+|++| ++|+|++.|+++++.+. +.+.-.++
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~-~~s~t~~~ 936 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKV-EASYTGRY 936 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC-cccHHHHH
Confidence 99999999 79999999999999976 34433333
No 462
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2e-39 Score=360.83 Aligned_cols=212 Identities=31% Similarity=0.458 Sum_probs=175.3
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000687 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
.|+++|++++|++... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 6999999999974211 25999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hcceEEEcccCccccc-cHHHHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000687 503 -RQQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 -r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iA 578 (1350)
++.++|++|++.+|.. |++||+.++.. .....+.. ..+.+.+..+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3679999999999875 99999986421 11111111 1122333333 444445556678999999999999
Q ss_pred HHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000687 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 579 Ral~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~~D~i~vl~~G~i~~~ 645 (1350)
|||+.+|++|||||||++||+.+...+.+.|+++. + ++|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999999874 3 7899999999999878999999999999864
No 463
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.4e-39 Score=368.33 Aligned_cols=221 Identities=28% Similarity=0.419 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccCcc-ccccHHHHhhcCCCCCCH-HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000687 508 LVSQEPAL-FATTIKENILLGRPDADL-NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 508 ~v~Q~~~l-f~~ti~~Ni~~g~~~~~~-~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|++|++.+ +..|++||+.++...... ...........+.+.+..+ |+.......+..||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999865 457999999886321100 0000000011123334443 4444556677899999999999999999999
Q ss_pred CEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000687 586 AILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 586 ~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999875 47999999999999964 99999999999999999888753
No 464
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.8e-40 Score=361.24 Aligned_cols=202 Identities=30% Similarity=0.493 Sum_probs=166.5
Q ss_pred EEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEE
Q 000687 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 35999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EcccCcc---ccccHHHHhhcCCCCC------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 509 VSQEPAL---FATTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 509 v~Q~~~l---f~~ti~~Ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|+|++.+ ++.|++||+.++.... ..++..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKA-----KVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHH-----HHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999976 5679999998864311 0011111 112233333 4444455567789999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999875 68999999999999876 9999999886 55544
No 465
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-39 Score=372.04 Aligned_cols=214 Identities=34% Similarity=0.549 Sum_probs=183.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|+. +..+|+||||+|++|+++|++||||||||||+++|+|++.|++|+|.++|.+...- ....|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999972 24699999999999999999999999999999999999999999999999998765 67788899
Q ss_pred EEEcccCccccc-cHHHHhhcCCCCC------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
|||||+|.++.. |++||+.|..... ..+.+.+.++.. |++..-..+...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELF-----------GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHc-----------CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998866 9999998743211 123344444443 3332224556789999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI-G-RTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||+.+|++|||||||++||+.+...+.+.|+++.+ | +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999864 5 799999999999987 999999999999999999887643
No 466
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-40 Score=358.84 Aligned_cols=205 Identities=25% Similarity=0.479 Sum_probs=173.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
++++|+++.|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.+|.. |++||+.++... .+..+.. ..+.+.+..+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 999999875321 1111111 1223444454 566666677789999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47999999999999865 9999999999998764
No 467
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=367.21 Aligned_cols=213 Identities=28% Similarity=0.428 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC--------ccEEEECCccCCCCCh
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS--------SGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~--------~G~I~idG~di~~i~l 1154 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 36999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHhhcccEEEccCCC-CCcccHHHHhccCCC-C------CC---HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCC
Q 000687 1155 KSLRRHMAIVPQEPC-LFASTIYENIAYGHE-S------AT---ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~-LF~gTIreNL~~~~~-~------~t---deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
..+|+.++|+||++. +|..|++||+.++.. . .+ ++.++++++..++. +.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-----------ALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCC
Confidence 888889999999986 678899999987521 1 11 12344555555544 33445567899
Q ss_pred hhHHHHHHHHHHhc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEE
Q 000687 1224 GGQKQRVAIARAFV---------RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAV 1291 (1350)
Q Consensus 1224 gGQrQrlaLARALl---------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~V 1291 (1350)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ |+|+|+|+|+++.+. .||+|++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998653 799999999999986 5999999
Q ss_pred EeCCEEeeecChhHHhhc
Q 000687 1292 IDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1292 l~~G~IvE~Gt~~eLl~~ 1309 (1350)
|++|+|++.|++++++..
T Consensus 228 l~~G~i~~~g~~~~~~~~ 245 (272)
T PRK13547 228 LADGAIVAHGAPADVLTP 245 (272)
T ss_pred EECCeEEEecCHHHHcCH
Confidence 999999999999998753
No 468
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=367.82 Aligned_cols=222 Identities=26% Similarity=0.402 Sum_probs=185.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC--------CcEEEECCeeCCCCC
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT--------SGQVLLDGHDIKSLK 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~i~g~~~~~~~ 498 (1350)
+|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++...+
T Consensus 1 ml~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~ 77 (272)
T PRK13547 1 MLTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAID 77 (272)
T ss_pred CeEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCC
Confidence 3789999999963 36999999999999999999999999999999999999998 999999999998888
Q ss_pred HHHHhcceEEEcccCc-cccccHHHHhhcCCCCC-CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000687 499 LRWLRQQIGLVSQEPA-LFATTIKENILLGRPDA-DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIA 576 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~-lf~~ti~~Ni~~g~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~ 576 (1350)
...+++.++|++|++. +|..|++||+.++.... .............+.+.+..+ |+++..+....+||||||||++
T Consensus 78 ~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ 155 (272)
T PRK13547 78 APRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQ 155 (272)
T ss_pred HHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHH
Confidence 7788888999999986 56789999998863211 000000000011123334444 6777778888999999999999
Q ss_pred HHHHhc---------cCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000687 577 IARAML---------KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 577 iARal~---------~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~ 644 (1350)
|||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|+|++
T Consensus 156 laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~ 235 (272)
T PRK13547 156 FARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA 235 (272)
T ss_pred HHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE
Confidence 999999 59999999999999999999999999998753 7999999999999865 99999999999999
Q ss_pred ecChHHHHh
Q 000687 645 IGTHDELIA 653 (1350)
Q Consensus 645 ~g~~~~l~~ 653 (1350)
.|+++++..
T Consensus 236 ~g~~~~~~~ 244 (272)
T PRK13547 236 HGAPADVLT 244 (272)
T ss_pred ecCHHHHcC
Confidence 999988864
No 469
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=334.96 Aligned_cols=223 Identities=26% Similarity=0.467 Sum_probs=193.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhc
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQ 504 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~ 504 (1350)
+.+..+|+.++|.. ++|++++||++++||+||+.||||+||||.+.++.|+..|++|+|.+||.|++.++... -|.
T Consensus 3 ~~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 46889999999974 46999999999999999999999999999999999999999999999999999999775 456
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
.|||+||||.+|.+ ||+|||..-.+.. ..+.+.+.+...+.+.+..+ .+.+.-...+..||||||+|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~-~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIR-EKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhh-hcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 79999999999987 9999998654321 11222233333444555555 67777888899999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchh-hhhcCEEEEEeCCEEEEecChHHHHhc
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLST-IRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~-~~~~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|+.++||||++++||.+-..|++.++.++ +|..|++.-|+... +.-|||.+++.+|+|..+|+++|+.++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999886 58899999999864 667999999999999999999999876
No 470
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-39 Score=365.21 Aligned_cols=225 Identities=25% Similarity=0.407 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC----CccEEEECCccCCCCChHHh
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP----SSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----~~G~I~idG~di~~i~l~~l 1157 (1350)
.|+++||+++| . .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcccEEEccCCC-CCc--ccHHHHhccC----CCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000687 1158 RRHMAIVPQEPC-LFA--STIYENIAYG----HESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~-LF~--gTIreNL~~~----~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++.++||||+|. .|. .|+.+|+... .....+++++++++..++.++ ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 4888876431 122344567777777776542 1233455678999999999
Q ss_pred HHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHh
Q 000687 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl 1307 (1350)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+. .||+|++|++|++++.|++++++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998643 799999999999986 49999999999999999999998
Q ss_pred hcCCCc-hhHHHHHh
Q 000687 1308 KNNPDG-CYARMIQL 1321 (1350)
Q Consensus 1308 ~~~~~g-~y~~l~~~ 1321 (1350)
+. +.. .++.++..
T Consensus 230 ~~-~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NA-PKHAVTRSLVSA 243 (254)
T ss_pred hC-CCCHHHHHHHHh
Confidence 76 344 34445543
No 471
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=365.47 Aligned_cols=219 Identities=27% Similarity=0.481 Sum_probs=184.2
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CC
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~--~~ 498 (1350)
+.|+++|++|+|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 35999999999999999999999999999999999999985 8999999999853 34
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCC--C-CH----HHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhH
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DL----NEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGq 571 (1350)
...+|+.++|++|++.+|..|++||+.++... . +. +.+.++++..++.++ ++...++.+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDE-------IKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHH
Confidence 45778899999999999999999999875211 0 11 122333333333222 2234566778999999
Q ss_pred HHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC-----CEEE
Q 000687 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQ-----GSVS 643 (1350)
Q Consensus 572 kqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~-----G~i~ 643 (1350)
|||++|||||+++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999998864 48999999999999875 999999999 9999
Q ss_pred EecChHHHHhc
Q 000687 644 EIGTHDELIAK 654 (1350)
Q Consensus 644 ~~g~~~~l~~~ 654 (1350)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999765
No 472
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.6e-39 Score=365.56 Aligned_cols=212 Identities=21% Similarity=0.358 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc--CCCCccEEEECCccCCCCChHHh-hc
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF--YEPSSGRVMIDGKDIRKYNLKSL-RR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl--~~p~~G~I~idG~di~~i~l~~l-R~ 1159 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 3699999999999999999999999999999999999 47999999999999988877654 45
Q ss_pred ccEEEccCCCCCcc-cHHHHhccCCCC---------CC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCC-CCCh
Q 000687 1160 HMAIVPQEPCLFAS-TIYENIAYGHES---------AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGV-QLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~g-TIreNL~~~~~~---------~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~-~LSg 1224 (1350)
.++|+||+|.+|.+ |+++|+.+.... .+ ++++.++++..++.+. ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE----------FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh----------hcccccccCcCH
Confidence 69999999998876 899998653110 11 1223444444444311 1112222 4999
Q ss_pred hHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh--cCEEEEEeCCEEeeec
Q 000687 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN--AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~--~DrI~Vl~~G~IvE~G 1301 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47999999999999976 7999999999999999
Q ss_pred ChhHHh
Q 000687 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++-
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 998654
No 473
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=372.75 Aligned_cols=219 Identities=31% Similarity=0.522 Sum_probs=185.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000687 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 47999999999974 369999999999999999999999999999999999986 6899999999998643 3
Q ss_pred HHHHhcceEEEcccCccccccHHHHhhcCCCCC--------------C-----HHHHHHHHHHHchHHHHhcCCCCcccc
Q 000687 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA--------------D-----LNEIEEAARVANAYSFIIKLPDGFDTQ 559 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~--------------~-----~~~~~~~~~~~~~~~~i~~l~~g~~t~ 559 (1350)
...+|+.++||+|++.+|+.|++||+.++.... . .+++.++++.. .++.++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~l~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQA-------ALWDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHc-------CCchhhhHH
Confidence 556788999999999999999999999763210 0 01122222222 233345566
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE-EEE
Q 000687 560 VGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVV-AVL 637 (1350)
Q Consensus 560 v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i-~vl 637 (1350)
.+..+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++ ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 77888999999999999999999999999999999999999999999999998777999999999999875 9997 577
Q ss_pred eCCEEEEecChHHHHhc
Q 000687 638 QQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 638 ~~G~i~~~g~~~~l~~~ 654 (1350)
++|++++.|+++++...
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999998764
No 474
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.8e-39 Score=355.56 Aligned_cols=202 Identities=34% Similarity=0.597 Sum_probs=176.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
++++||+++|+. +++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEccCCCCCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGH-ES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~-~~-----~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999874 9999997542 11 12346677888888877665544 4799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecC
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt 1302 (1350)
++++|+|+||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999999875 37899999999999865 99999999999999874
No 475
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.2e-39 Score=359.05 Aligned_cols=205 Identities=37% Similarity=0.584 Sum_probs=173.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--CCHHHHhcc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS--LKLRWLRQQ 505 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~--~~~~~~r~~ 505 (1350)
|+++|++++|++ .++|+++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 369999999999999999999999999999999999999999999999999853 344567889
Q ss_pred eEEEcccCcccc-ccHHHHhhcCCC---CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 506 IGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~~Ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal 581 (1350)
++|++|++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++..+.....+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 599999987532 122222111 123344444 666666777789999999999999999
Q ss_pred ccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000687 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 582 ~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i 642 (1350)
+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 48999999999999975 999999999975
No 476
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.1e-39 Score=362.26 Aligned_cols=214 Identities=23% Similarity=0.400 Sum_probs=170.9
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCChHHhh
Q 000687 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~i~l~~lR 1158 (1350)
++|+||+|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999998642 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEccCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhcchH-HHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000687 1159 RHMAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADK-FISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~~~tdeei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARAL 1236 (1350)
++++|+||++.+|.+ |++||+.++..........++.+....++ .+..+ +++.........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421100000000000000111 12211 233333345578999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCceEEEEccCc-hHH-hhcCEEEEEeCCEEeeec
Q 000687 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRL-STI-RNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1237 lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRl-sti-~~~DrI~Vl~~G~IvE~G 1301 (1350)
+++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ ..+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 478999999998 455 569999999999999876
No 477
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-39 Score=362.90 Aligned_cols=218 Identities=29% Similarity=0.524 Sum_probs=185.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~~ 499 (1350)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 4889999999963 369999999999999999999999999999999999864 4899999999998653 45
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCC---CCHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+|++++|+||++.+|+.|++||+.++... .+.+ ++.++++.+++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 6778899999999999999999999875321 1112 2334444444443332 234566789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999998
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 755
No 478
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.3e-39 Score=376.47 Aligned_cols=200 Identities=24% Similarity=0.448 Sum_probs=173.4
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccEEEccCCCCCcc-cHH
Q 000687 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFAS-TIY 1176 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~~VpQdp~LF~g-TIr 1176 (1350)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 345678999999999999875 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEecCCC
Q 000687 1177 ENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATS 1250 (1350)
Q Consensus 1177 eNL~~~~~--~~t----deei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~p~ILlLDEaTS 1250 (1350)
|||.+... ..+ ++++.++++..++.+.. .....+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986421 122 23355566666654432 23345799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1251 ALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1251 aLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
+||+.+.+.+++.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 58999999999999865 999999999999999999999765
No 479
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=363.86 Aligned_cols=218 Identities=28% Similarity=0.434 Sum_probs=185.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.+.+++++++|++ .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++... ..
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 3699999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCCCC-----CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA-----DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqr 574 (1350)
..+|+.++|++|++.+|..|++||+.++.... ..+++.++++..++.+.+ ....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEV-------KDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHHH
Confidence 46788899999999999899999998864211 112344455554443322 223456778999999999
Q ss_pred HHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe--------CCEEEEe
Q 000687 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ--------QGSVSEI 645 (1350)
Q Consensus 575 i~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~--------~G~i~~~ 645 (1350)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 99999996 8999999
Q ss_pred cChHHHHhc
Q 000687 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999865
No 480
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.5e-39 Score=381.11 Aligned_cols=233 Identities=34% Similarity=0.515 Sum_probs=187.0
Q ss_pred ceEEEEEEEEECCCC--------CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCee--CC
Q 000687 426 GLIELKHVDFSYPSR--------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHD--IK 495 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~--~~ 495 (1350)
..++++|++++|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.| ++
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 468999999999742 13468999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhcceEEEcccCcc--c-cccHHHHhhcCCCCC-CHHHHHHHHHHHchHHHHhcCCCCccc-cccCCCCCCChh
Q 000687 496 SLKLRWLRQQIGLVSQEPAL--F-ATTIKENILLGRPDA-DLNEIEEAARVANAYSFIIKLPDGFDT-QVGERGVQLSGG 570 (1350)
Q Consensus 496 ~~~~~~~r~~i~~v~Q~~~l--f-~~ti~~Ni~~g~~~~-~~~~~~~~~~~~~~~~~i~~l~~g~~t-~v~~~g~~LSgG 570 (1350)
.-+...+|+++-+|+|||+- - ..||+++|.-..... ....-....+.+.+.+.+ |+.. .....+.+||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~V-----gL~~~~l~ryP~elSGG 433 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELV-----GLPPEFLDRYPHELSGG 433 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHc-----CCCHHHHhcCchhcCcc
Confidence 22345678899999999963 3 349999996432100 000011111222333322 4433 577889999999
Q ss_pred HHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000687 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~ 647 (1350)
|||||||||||..+|++||+|||||+||+-+...|.+.|+++.+ |.|.|+||||++.++. ||||+||++|+|+|.|+
T Consensus 434 QrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~ 513 (539)
T COG1123 434 QRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGP 513 (539)
T ss_pred hhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999998853 8999999999999988 99999999999999999
Q ss_pred hHHHHhccCCcHHHHH
Q 000687 648 HDELIAKGENGVYAKL 663 (1350)
Q Consensus 648 ~~~l~~~~~~~~~~~l 663 (1350)
.+++.+.+.+.+-+.|
T Consensus 514 ~~~v~~~p~h~Ytr~L 529 (539)
T COG1123 514 TEKVFENPQHPYTRKL 529 (539)
T ss_pred HHHHhcCCCChHHHHH
Confidence 9999987644433333
No 481
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-40 Score=343.93 Aligned_cols=221 Identities=32% Similarity=0.501 Sum_probs=191.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~ 505 (1350)
.+++++++++|++ -.+++|+||++++||++||+|||||||||++|+|.|+|+|++|+|.++|+||..++++.+ |..
T Consensus 4 lL~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 4789999999974 369999999999999999999999999999999999999999999999999999998764 567
Q ss_pred eEEEcccCccccc-cHHHHhhcCCCCC-----------CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHH
Q 000687 506 IGLVSQEPALFAT-TIKENILLGRPDA-----------DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQ 573 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~~Ni~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkq 573 (1350)
|+--||.+.+|++ ||.||+..+.... ...+..++.+. +.+.++.+ |++...++...+||+|||.
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~--A~~~Le~v--gL~~~a~~~A~~LsyG~qR 156 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARER--ARELLEFV--GLGELADRPAGNLSYGQQR 156 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHH--HHHHHHHc--CCchhhcchhhcCChhHhH
Confidence 8999999999976 9999998873211 00111222222 23334444 8888888888999999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|+.|||||..+|++|+||||.++|.+.....+.+.|+++++ |.|+++|-||++.+.. ||||+||+.|+++.+|+|+|
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~e 236 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEE 236 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHH
Confidence 99999999999999999999999999999999999999874 5999999999999987 99999999999999999999
Q ss_pred HHhc
Q 000687 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
..++
T Consensus 237 V~~d 240 (250)
T COG0411 237 VRNN 240 (250)
T ss_pred HhcC
Confidence 9876
No 482
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=354.24 Aligned_cols=201 Identities=33% Similarity=0.531 Sum_probs=169.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 4789999999632 2 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEcccCccccc-cHHHHhhcCCCC-C-----CHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 508 LVSQEPALFAT-TIKENILLGRPD-A-----DLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~~-~-----~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
|++|++.+|.+ |++||+.++... . ..+++.++++.. |++........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARV-----------GLAGLEKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHc-----------CCHHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999975 999999876421 1 112233334333 44434445566899999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
++.+|++|||||||++||++++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999876 9999999999998764
No 483
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.7e-39 Score=375.33 Aligned_cols=204 Identities=25% Similarity=0.451 Sum_probs=173.4
Q ss_pred CccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceEEEcccCccccc-cHH
Q 000687 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFAT-TIK 521 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~ 521 (1350)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++||+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 345678899999999999876 999
Q ss_pred HHhhcCCC--CCCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEeEEecccCCcCH
Q 000687 522 ENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDS 599 (1350)
Q Consensus 522 ~Ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~~~illlDE~ts~lD~ 599 (1350)
||+.+... ..+..+..+ .+.+.+..+ |+.........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987422 112122111 122334444 555555666789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 600 ESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 600 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999885 58999999999999876 999999999999999999998754
No 484
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=359.15 Aligned_cols=215 Identities=37% Similarity=0.542 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 468999999973 369999999999999999999999999999999999999999999999999876654 367899
Q ss_pred EEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+|.+ |++||+.++... .+.....+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKE-----RVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999875321 11111111 112223333 555555666679999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999998753 8999999999999865 999999999999999999888754
No 485
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.6e-39 Score=359.49 Aligned_cols=215 Identities=33% Similarity=0.527 Sum_probs=181.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcceE
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999973 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEcccCccccc-cHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 508 LVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|+||+|.+|.+ |++||+.++... .+..+.. ..+.+.+..+ |+.........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999876431 1111111 1223444444 344445556678999999999999999999
Q ss_pred CCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998754 7999999999999866 999999999999999999998754
No 486
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=365.27 Aligned_cols=220 Identities=26% Similarity=0.424 Sum_probs=181.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CcEEEECCeeCCCC-----C
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT---SGQVLLDGHDIKSL-----K 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~i~g~~~~~~-----~ 498 (1350)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 6899999999963 36999999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhcceEEEcccCccccc-cHHHHhhcCCCCCCH--H---HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 499 LRWLRQQIGLVSQEPALFAT-TIKENILLGRPDADL--N---EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~--~---~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
...++++++|+||++.+|.. |++||+.++...... . ..........+.+.+..+ |++........+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 35667889999999998874 999999876421100 0 000000111223344444 555556667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999885 38999999999998755 9999999999999999999
Q ss_pred HH
Q 000687 650 EL 651 (1350)
Q Consensus 650 ~l 651 (1350)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 487
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.2e-39 Score=369.85 Aligned_cols=214 Identities=30% Similarity=0.534 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhccc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i 1161 (1350)
.|+++||+.+|.. +..+|+||||+|++||.+|++|||||||||++++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999963 24699999999999999999999999999999999999999999999999998765 77889999
Q ss_pred EEEccCCCCCcc-cHHHHhccCC-----C-CCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 1162 AIVPQEPCLFAS-TIYENIAYGH-----E-SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~-----~-~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLAR 1234 (1350)
|||||+|.++.. |++|||.+.. + ...++.+.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 999999997765 9999998642 1 12345678888888876521 1234569999999999999
Q ss_pred HhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-C-ceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhc
Q 000687 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS-G-KTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-g-~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+...+++.|+++.+ | +||+++||.++.+.. ||||++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999764 5 799999999999977 999999999999999999998754
No 488
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-39 Score=357.25 Aligned_cols=210 Identities=33% Similarity=0.528 Sum_probs=177.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++||+++|+. . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.+
T Consensus 1 ~l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i 73 (232)
T PRK10771 1 MLKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPV 73 (232)
T ss_pred CeEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccE
Confidence 3789999999963 1 2399999999999999999999999999999999999999999999998765442 5689
Q ss_pred EEEcccCccccc-cHHHHhhcCCC-CC--C---HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000687 507 GLVSQEPALFAT-TIKENILLGRP-DA--D---LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~~Ni~~g~~-~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iAR 579 (1350)
+|++|++.+|.+ |++||+.++.. .. . .+++.++++.. |++..+......||||||||++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~lar 142 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQM-----------GIEDLLARLPGQLSGGQRQRVALAR 142 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHc-----------CcHHHHhCCcccCCHHHHHHHHHHH
Confidence 999999999875 99999987531 11 1 12233333333 4444455556789999999999999
Q ss_pred HhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000687 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++++|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 143 al~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 143 CLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999998743 8999999999999876 999999999999999999988754
No 489
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.4e-39 Score=359.43 Aligned_cols=215 Identities=28% Similarity=0.398 Sum_probs=173.4
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCcEEEECCeeCCCCCHHHH
Q 000687 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD---PTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
.++|+||+|+|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~ 79 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQF 79 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHh
Confidence 367999999997532 3579999999999999999999999999999999999999 99999999999875 3467
Q ss_pred hcceEEEcccCccccc-cHHHHhhcCCCCCCHHHHHHHHHHHchHH-HHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 503 RQQIGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYS-FIIKLPDGFDTQVGERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~-~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARa 580 (1350)
|++++|++|++.+|++ |++||+.++..........+..+.....+ .+..+ ++.........+||||||||++||||
T Consensus 80 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~lara 157 (226)
T cd03234 80 QKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQ 157 (226)
T ss_pred cccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHH
Confidence 8899999999999987 99999987532110000001111111111 23222 44444556678999999999999999
Q ss_pred hccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCc-hhhh-hcCEEEEEeCCEEEEec
Q 000687 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRL-STIR-KADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 581 l~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l-~~~~-~~D~i~vl~~G~i~~~g 646 (1350)
|+++|++|||||||++||+.+...+.+.|+++. +++|+|++||++ ..+. .||+|++|++|++++.|
T Consensus 158 l~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 158 LLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999998874 489999999998 4554 59999999999999875
No 490
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-39 Score=362.66 Aligned_cols=218 Identities=31% Similarity=0.503 Sum_probs=182.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CCH
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~--~~~ 499 (1350)
+|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 6899999999973 369999999999999999999999999999999999975 5 59999999999864 334
Q ss_pred HHHhcceEEEcccCccccccHHHHhhcCCC--CC-CHH----HHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHH
Q 000687 500 RWLRQQIGLVSQEPALFATTIKENILLGRP--DA-DLN----EIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqk 572 (1350)
..+++.++|++|++.+|+.|+++|+.++.. .. ..+ ++.++++.+++. .++.......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIW-------DEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCc-------cchhhHHhcCcccCCHHHH
Confidence 567789999999999998999999987521 11 111 122222222221 1233445667789999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999988
Q ss_pred Hhc
Q 000687 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 765
No 491
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.4e-39 Score=366.72 Aligned_cols=229 Identities=29% Similarity=0.467 Sum_probs=188.5
Q ss_pred EEEEEEEEECCCCC------CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCh--
Q 000687 1083 VELKHVDFSYPSRP------DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL-- 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~------~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l-- 1154 (1350)
|+++||+++|+..+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 88999999997310 2479999999999999999999999999999999999999999999999999988765
Q ss_pred -HHhhcccEEEccCCC--CC-cccHHHHhccCCC---CCCHHHHHHHHHHhcchHHHhcCCCCccc-cccCCCCCCChhH
Q 000687 1155 -KSLRRHMAIVPQEPC--LF-ASTIYENIAYGHE---SATESEIIEAARLANADKFISSLPDGYKT-FVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 -~~lR~~i~~VpQdp~--LF-~gTIreNL~~~~~---~~tdeei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQ 1226 (1350)
..+|+.++|+||++. ++ ..|+++|+.+... ..+.+ .....+++.+..+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 346889999999983 43 4699999864211 11111 1112234444443 5553 3456677899999
Q ss_pred HHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecCh
Q 000687 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1227 rQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~ 1303 (1350)
|||++|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 8899999999999975 999999999999999999
Q ss_pred hHHhhcCCCchhHHHHH
Q 000687 1304 SHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~ 1320 (1350)
+++... ++.|...+.
T Consensus 237 ~~~~~~--~~~~~~~~~ 251 (268)
T PRK10419 237 GDKLTF--SSPAGRVLQ 251 (268)
T ss_pred hhccCC--CCHHHHHHH
Confidence 999864 666665554
No 492
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=5.7e-39 Score=364.57 Aligned_cols=222 Identities=25% Similarity=0.414 Sum_probs=185.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC---ccEEEECCccCCCC-----C
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS---SGRVMIDGKDIRKY-----N 1153 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~i-----~ 1153 (1350)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 36999999999999999999999999999999999999986 49999999998654 3
Q ss_pred hHHhhcccEEEccCCCCCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhcchHHHhcCCCCccccccCC
Q 000687 1154 LKSLRRHMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGER 1218 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~ 1218 (1350)
...+|++++|+||++.+|. .|+++|+.++... ...+++.++++..++.+... ..
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAH-----------QR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHh-----------CC
Confidence 4567889999999999887 5999999865311 11234556666666654433 34
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHH-hhcCEEEEEeCC
Q 000687 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDDG 1295 (1350)
Q Consensus 1219 G~~LSgGQrQrlaLARALlr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~G 1295 (1350)
..+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+ ..||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46799999999999999999999999999999999999999999999875 389999999999986 459999999999
Q ss_pred EEeeecChhHHhhcCCCchhHHHHHh
Q 000687 1296 KVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1296 ~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
++++.|+++++ . .....+++..
T Consensus 230 ~i~~~g~~~~~-~---~~~~~~~~~~ 251 (262)
T PRK09984 230 HVFYDGSSQQF-D---NERFDHLYRS 251 (262)
T ss_pred EEEEeCCHHHh-c---cHHHHHHHhh
Confidence 99999999996 2 2345555543
No 493
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-39 Score=353.76 Aligned_cols=234 Identities=30% Similarity=0.511 Sum_probs=186.0
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCC-C----CCcEEEECCeeCCCCCHHH
Q 000687 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-P----TSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-~----~~G~i~i~g~~~~~~~~~~ 501 (1350)
++++|++.+|+... ...+++||||++++||++||||+|||||||+.+.|+|+.+ | .+|+|.++|.|+-.++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999996532 3469999999999999999999999999999999999998 4 5799999999999998875
Q ss_pred Hh----cceEEEcccCcc-cc--ccHHHHhh----cCCCCCCHHH-HHHHHHHHchHHHHhcCCCCccccccCCCCCCCh
Q 000687 502 LR----QQIGLVSQEPAL-FA--TTIKENIL----LGRPDADLNE-IEEAARVANAYSFIIKLPDGFDTQVGERGVQLSG 569 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~l-f~--~ti~~Ni~----~g~~~~~~~~-~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSg 569 (1350)
+| +.|+||||||.- +| -||.+-+. .-....+.+| ...+. .+.+.+ .+|+ -+..+...+.+|||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~---~~L~~V-gi~~-~~~~~~~YPhelSG 156 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAI---ELLELV-GIPD-PERRLKSYPHELSG 156 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHH---HHHHHc-CCCC-HHHHHhhCCcccCC
Confidence 33 589999999842 33 25555443 2111101111 11111 111211 2221 22356778899999
Q ss_pred hHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
||||||.||-||+.+|++||.||||+|||..+++.|.+.|+++. .|.|+|+||||+..+.. ||||+||..|+|+|.|
T Consensus 157 GMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~g 236 (316)
T COG0444 157 GMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEEG 236 (316)
T ss_pred cHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEeC
Confidence 99999999999999999999999999999999999999999986 48999999999999876 9999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHHH
Q 000687 647 THDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l~~~ 666 (1350)
+.++++.++.+.+.+.|++.
T Consensus 237 ~~~~i~~~P~HPYT~~Ll~s 256 (316)
T COG0444 237 PVEEIFKNPKHPYTRGLLNS 256 (316)
T ss_pred CHHHHhcCCCChHHHHHHHh
Confidence 99999999877777777754
No 494
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.8e-39 Score=361.70 Aligned_cols=215 Identities=29% Similarity=0.373 Sum_probs=176.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCCcEEEECCeeCCCCCHHHH-hc
Q 000687 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY--DPTSGQVLLDGHDIKSLKLRWL-RQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~i~g~~~~~~~~~~~-r~ 504 (1350)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 36999999999999999999999999999999999994 7999999999999988776554 45
Q ss_pred ceEEEcccCccccc-cHHHHhhcCCCC---------CCHHHHHHHHHHHchHHHHhcCCCCccc-cccCCCC-CCChhHH
Q 000687 505 QIGLVSQEPALFAT-TIKENILLGRPD---------ADLNEIEEAARVANAYSFIIKLPDGFDT-QVGERGV-QLSGGQK 572 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~~Ni~~g~~~---------~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~v~~~g~-~LSgGqk 572 (1350)
.++||+|++.+|.+ |++||+.+.... .+.++..+ .+.+.+..+ |++. ....... .||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK-----LLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH-----HHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999999876 999999764211 01111111 122333333 4432 2334444 5999999
Q ss_pred HHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEecChH
Q 000687 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK--ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~--~D~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999885 48999999999999875 7999999999999999987
Q ss_pred HHH
Q 000687 650 ELI 652 (1350)
Q Consensus 650 ~l~ 652 (1350)
++.
T Consensus 231 ~~~ 233 (243)
T TIGR01978 231 LAK 233 (243)
T ss_pred Hhc
Confidence 653
No 495
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.2e-39 Score=378.33 Aligned_cols=213 Identities=27% Similarity=0.463 Sum_probs=180.5
Q ss_pred EEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC----hHHhhcccE
Q 000687 1087 HVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN----LKSLRRHMA 1162 (1350)
Q Consensus 1087 nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~----l~~lR~~i~ 1162 (1350)
|++++|++ .. + |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 23 4 999999999999999999999999999999999999999999999986542 345688999
Q ss_pred EEccCCCCCcc-cHHHHhccCCCCCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000687 1163 IVPQEPCLFAS-TIYENIAYGHESATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl 1237 (1350)
||||++.+|.. |++||+.++...... +.+.+.++..++.++. .....+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLL-----------GRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999976432221 2345555555554443 3445689999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHhh-cCEEEEEeCCEEeeecChhHHhhcCCCch
Q 000687 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~G~IvE~Gt~~eLl~~~~~g~ 1314 (1350)
.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++... +...
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~ 226 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS-PDLP 226 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC-cCcc
Confidence 99999999999999999999999999998653 7999999999999865 999999999999999999999876 4545
Q ss_pred hH
Q 000687 1315 YA 1316 (1350)
Q Consensus 1315 y~ 1316 (1350)
|.
T Consensus 227 ~~ 228 (354)
T TIGR02142 227 WL 228 (354)
T ss_pred cc
Confidence 54
No 496
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=320.46 Aligned_cols=226 Identities=32% Similarity=0.531 Sum_probs=190.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC---------
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL--------- 497 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~--------- 497 (1350)
.++++|+.++|+.. .+|++||++.++|+.+.|+|.|||||||++++|.=+..|+.|+|.++|.+|+-.
T Consensus 6 ~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 58899999999743 499999999999999999999999999999999999999999999999987521
Q ss_pred ----CHHHHhcceEEEcccCccccc-cHHHHhhcCCC---CCC-HHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCC
Q 000687 498 ----KLRWLRQQIGLVSQEPALFAT-TIKENILLGRP---DAD-LNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLS 568 (1350)
Q Consensus 498 ----~~~~~r~~i~~v~Q~~~lf~~-ti~~Ni~~g~~---~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LS 568 (1350)
....+|.+.|+|+|+..|++- ||.||+.-+.- ..+ .+.++.| ..++.+. |+.......+..||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~A------e~~L~kV--Gi~ek~~~YP~~LS 154 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERA------EKYLAKV--GIAEKADAYPAHLS 154 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHH------HHHHHHh--CchhhhhcCccccC
Confidence 134688999999999999965 99999864311 111 1222222 2334443 77777778889999
Q ss_pred hhHHHHHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000687 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g 646 (1350)
|||+||++|||||.-+|+++++|||||||||+---.+.+.++++. .|||.++|||-+.+.++ +.+++.|.+|.|-|+|
T Consensus 155 GGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G 234 (256)
T COG4598 155 GGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEG 234 (256)
T ss_pred chHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccC
Confidence 999999999999999999999999999999999999999998885 59999999999999998 8999999999999999
Q ss_pred ChHHHHhccCCcHHHHH
Q 000687 647 THDELIAKGENGVYAKL 663 (1350)
Q Consensus 647 ~~~~l~~~~~~~~~~~l 663 (1350)
+|+++..++.+...+++
T Consensus 235 ~P~qvf~nP~S~RlkqF 251 (256)
T COG4598 235 PPEQVFGNPQSPRLKQF 251 (256)
T ss_pred ChHHHhcCCCCHHHHHH
Confidence 99999988655544444
No 497
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-39 Score=361.39 Aligned_cols=207 Identities=29% Similarity=0.458 Sum_probs=174.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcce
Q 000687 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +..+
T Consensus 1 ml~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~ 72 (255)
T PRK11248 1 MLQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAER 72 (255)
T ss_pred CEEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcE
Confidence 3789999999963 3699999999999999999999999999999999999999999999999988642 2469
Q ss_pred EEEcccCcccc-ccHHHHhhcCCCC--CCHHHHHHHHHHHchHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000687 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~~Ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~v~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.+|. .|++||+.++... ....+.. ..+.+.+..+ |++......+.+||||||||++|||||+.
T Consensus 73 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrl~laral~~ 145 (255)
T PRK11248 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKV--GLEGAEKRYIWQLSGGQRQRVGIARALAA 145 (255)
T ss_pred EEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999887 5999999875321 1111111 1123344444 55555666778999999999999999999
Q ss_pred CCCEeEEecccCCcCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 000687 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQ--QGSVSEIGTH 648 (1350)
Q Consensus 584 ~~~illlDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~D~i~vl~--~G~i~~~g~~ 648 (1350)
+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 146 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 146 NPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999873 38999999999999865 99999998 5999998764
No 498
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-39 Score=362.55 Aligned_cols=202 Identities=28% Similarity=0.465 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHHhhcccE
Q 000687 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.+++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999998642 34689
Q ss_pred EEccCCCCCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000687 1163 IVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~td----eei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARA 1235 (1350)
|+||++.+|. .|+++|+.++.. .... +++.++++..++.+.. .....+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAE-----------KRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999999887 599999986421 1222 2355556666554433 23456799999999999999
Q ss_pred hccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCceEEEEccCchHHhh-cCEEEEEe--CCEEeeecCh
Q 000687 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVID--DGKVAELGSH 1303 (1350)
Q Consensus 1236 Llr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~--~G~IvE~Gt~ 1303 (1350)
|+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 48999999999999855 99999998 5999998765
No 499
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-39 Score=334.53 Aligned_cols=220 Identities=27% Similarity=0.453 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCChHH-hhcc
Q 000687 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~i~l~~-lR~~ 1160 (1350)
-++++||+..|.. ..+|++|||++++||+|+++||||+||||++++|+|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 47999999999999999999999999999999999999999999999999999998775 5778
Q ss_pred cEEEccCCCCCcc-cHHHHhccCCCCCCHHHHHHHHHHhcchHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000687 1161 MAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~tdeei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALlr~ 1239 (1350)
|+||||...+|.. ||.|||..|.....+++-+ ...+++.-+-+| -|.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999965 9999999774322221111 111222333345 355566677889999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CceEEEEccCchHHh-hcCEEEEEeCCEEeeecChhHHhhc
Q 000687 1240 AEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~G~IvE~Gt~~eLl~~ 1309 (1350)
|++|+|||||.+|-|.--+.|.++|+++.+ |.||++|-++..... -+||.+||++|+|+..|+.++|..+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 679999999999875 5999999999999999999999876
No 500
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.5e-39 Score=363.42 Aligned_cols=224 Identities=30% Similarity=0.463 Sum_probs=185.3
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEeeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-
Q 000687 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL- 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~- 499 (1350)
.|+++||+|+|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 58999999999731 02469999999999999999999999999999999999999999999999999887765
Q ss_pred --HHHhcceEEEcccCc--cc-cccHHHHhhcCCCCCCHHHHHHHHHHHchHHHHhcCCCCccc-cccCCCCCCChhHHH
Q 000687 500 --RWLRQQIGLVSQEPA--LF-ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT-QVGERGVQLSGGQKQ 573 (1350)
Q Consensus 500 --~~~r~~i~~v~Q~~~--lf-~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~v~~~g~~LSgGqkq 573 (1350)
..+|+.++|++|++. ++ ..|+.+|+.+...... ..........+.+.+..+ |+++ ..+..+..|||||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~q 158 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQ 158 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHH
Confidence 346789999999983 44 3599999865321000 000111122234455555 7763 567788899999999
Q ss_pred HHHHHHHhccCCCEeEEecccCCcCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000687 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~illlDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~D~i~vl~~G~i~~~g~~~~ 650 (1350)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 238 (268)
T PRK10419 159 RVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGD 238 (268)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhh
Confidence 99999999999999999999999999999999999998753 8999999999999975 99999999999999999999
Q ss_pred HHhc
Q 000687 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+...
T Consensus 239 ~~~~ 242 (268)
T PRK10419 239 KLTF 242 (268)
T ss_pred ccCC
Confidence 8754
Done!