Query 000687
Match_columns 1350
No_of_seqs 498 out of 4700
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 15:52:02 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000687.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_460-463//hhsearch_pdb/000687hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1796.5 135.4 1236 82-1325 55-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1574.3 116.8 1230 83-1328 29-1276(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 862.1 71.7 580 741-1325 58-656 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 789.2 59.5 578 743-1325 33-628 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 740.9 70.7 566 748-1323 14-579 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 740.2 65.4 571 742-1324 22-592 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 737.1 66.7 571 746-1323 3-577 (578)
8 2yl4_A ATP-binding cassette SU 1.0 1 1 722.9 73.3 576 745-1325 7-586 (595)
9 3qf4_A ABC transporter, ATP-bi 1.0 1 1 720.2 73.7 573 84-667 6-578 (587)
10 3b5x_A Lipid A export ATP-bind 1.0 1 1 718.9 77.2 568 744-1323 12-580 (582)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1796.52 Aligned_cols=1236 Identities=36% Similarity=0.591 Sum_probs=1057.7
Q ss_pred CCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------CCCHHHHHHH
Q ss_conf 887641188998942714588999999999997978899999999999862479----------------8861487999
Q 000687 82 SDVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSN----------------VNNMDKMMQE 145 (1350)
Q Consensus 82 ~~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 145 (1350)
....+++++++|+|..+.++.+++++++++++.|.+.|+++.+++.+++.+... ......+...
T Consensus 55 ~~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (1321)
T 4f4c_A 55 EVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHD 134 (1321)
T ss_dssp CCSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 25687799997315676789999999999999999999999999999999970100014543000344310016899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999982995557146882279999998899999999999
Q 000687 146 VLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEK 225 (1350)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~r~s~D~~~i~~~~~~~ 225 (1350)
+..+++++++++++.+++.+++.++|.+.++++..++|.++|++++++|++|||++ ++|++++|+++|++.+++.+...
T Consensus 135 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~~ 213 (1321)
T 4f4c_A 135 VMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGDK 213 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999978898998799-84899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
Q ss_conf 99999899999999999999969899999999999999999999999999999999999999999999802999998652
Q 000687 226 LGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVG 305 (1350)
Q Consensus 226 ~~~~i~~~~~~~~~iii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIk~~~~ 305 (1350)
+..++..++.++++++++++++|++++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|++
T Consensus 214 l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 293 (1321)
T 4f4c_A 214 IGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNG 293 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999983999998214
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999878999999999999999999999998116687799999999999999999999
Q 000687 306 ESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAA 385 (1350)
Q Consensus 306 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 385 (1350)
|+.+.++|.+..++..+...+.....++..+...++.++.+++++|+|++++.+|.++.|.+++++.++.....|+..+.
T Consensus 294 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~ 373 (1321)
T 4f4c_A 294 LRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAG 373 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999999999999999599869999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCC
Q ss_conf 99999999999999999988249998888878766789753099997899889999985411027986289899998699
Q 000687 386 PSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSS 465 (1350)
Q Consensus 386 ~~~~~~~~~~~s~~ri~~~~~~~~e~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~s 465 (1350)
..+..+.++.++++|++++++.+|+.+.....+....+..|.|+|+||+|+||++++.++|+|+||++++|++++|||||
T Consensus 374 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 374 PQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 99999999999999999997178534566655656778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCH
Q ss_conf 99389999999628779974899999607888888874346888256766501289996229999998899999999721
Q 000687 466 GSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANA 545 (1350)
Q Consensus 466 GsGKSTl~~~l~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~ 545 (1350)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||||||++|+++.+++++++||+.|++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 99995099985220049999889569999999998226998768726667869899999999999860897699972591
Q 000687 546 YSFIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRL 625 (1350)
Q Consensus 546 ~~~i~~l~~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDE~ts~lD~~~~~~i~~~i~~~~~~~tvi~itH~~ 625 (1350)
++||+.||+||+|.+||+|.+|||||||||+||||+|++|+|||||||||+||+++++.+++++.++.+++|+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred HHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 365303989998498798841957898326891899999999996675421002478999866678-8873111488888
Q 000687 626 STIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNS-VSSPIIARNSSYG 704 (1350)
Q Consensus 626 ~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 704 (1350)
+++..||+|++|++|+|+|+|+|+||+++ +|.|++++..|........................ .............
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~~--~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMAQ--QGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMD 691 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHTT--TCHHHHHHHHHHHHHHHHHHHCC--------------------------
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 78986898999639965136899999985--3279999996221222233233443322321112222234222222211
Q ss_pred CCCCCCCCCCC-CCCCCCC--CCCCC-CCC----HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89765445677-6776555--65668-972----1345666544238999999730335999999999999989989999
Q 000687 705 RSPYSRRLSDF-STSDFSL--SLDAT-YPS----YRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFF 776 (1350)
Q Consensus 705 ~~~~~~~~~~~-~~~~~~~--~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 776 (1350)
......+.... ....... ..... ... ...+.......+..+++++.+.++.|+.++++++++.+.+...+.+
T Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 771 (1321)
T 4f4c_A 692 DIMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTY 771 (1321)
T ss_dssp ------------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHH
T ss_pred CHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02211101321245677402577753154038999999997078631099999998778999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 99999999998198636779999999999999999999999999999999999999999999999998188543333566
Q 000687 777 AYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEEN 856 (1350)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~ 856 (1350)
++++..+++.+...... .......|.+++++++++..++.+++.+++.+.+.++..++|.++|++++++|++|||.+++
T Consensus 772 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~ 850 (1321)
T 4f4c_A 772 SVFFTSFMNVFAGNPAD-FLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQN 850 (1321)
T ss_dssp HHHHHHHHHHTSSCSST-TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGG
T ss_pred HHHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCC
T ss_conf 99999999875179345-56678999999999999999999999999999999999999999988873499333216788
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 85699999994399999999776999999999999999999999899999999999999999999999985587999999
Q 000687 857 ESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAA 936 (1350)
Q Consensus 857 ~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~ 936 (1350)
++|++++|+++|++.++..++..+..++..++.+++.++++++++|.+++++++++|++++...+..+..+....+..+.
T Consensus 851 ~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 930 (1321)
T 4f4c_A 851 ASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASE 930 (1321)
T ss_dssp CHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSH
T ss_pred CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 84888850250599999999999999999865377770221378689999999988899999999999999999999999
Q ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999999800999999612899999999998789999999999985558999999999999999999999970777
Q 000687 937 HSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGIS 1016 (1350)
Q Consensus 937 ~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~ 1016 (1350)
..+...++.|++.|+++||+|+.|+.+.++|.+..+...+...+.....+....+...+.++..++++|+|..++..+..
T Consensus 931 ~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~ 1010 (1321)
T 4f4c_A 931 FADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPP 1010 (1321)
T ss_dssp HHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88898899999962798886141488999999999999999999999999999999999999999999875788753765
Q ss_pred CHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC
Q ss_conf 68999--9999999999999999998899999999999999998335567899999999999999871899988998899
Q 000687 1017 DFSKT--IRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPS 1094 (1350)
Q Consensus 1017 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~ 1094 (1350)
+.+.. +.++..+.....++.......+.+.+...+.+|+.++++.+++.++.... +.+++..|.|+|+||+|+||+
T Consensus 1011 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~g~I~f~nVsf~Y~~ 1088 (1321)
T 4f4c_A 1011 TMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLA--GEKKKLYGKVIFKNVRFAYPE 1088 (1321)
T ss_dssp SSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCC--SBCCCCCCCEEEEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCEEEEEEEEEECCC
T ss_conf 421478999999998778899999999999999999999899986076657776677--878888881899987985799
Q ss_pred CCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCC
Q ss_conf 99988421102898389899999599997889999985237899527999995178999687622208873677777555
Q 000687 1095 RPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFAST 1174 (1350)
Q Consensus 1095 ~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gT 1174 (1350)
+++.|||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+|++++++++||++|++|||||+||+||
T Consensus 1089 ~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gT 1168 (1321)
T 4f4c_A 1089 RPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCS 1168 (1321)
T ss_dssp SCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEE
T ss_pred CCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCC
T ss_conf 99882124516998898999998999981999999995686389978999999865499999985459987899732723
Q ss_pred HHHHHCCCC--CCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCC
Q ss_conf 888852499--999999999999981526999609987443115999999936999999999821399888983677789
Q 000687 1175 IYENIAYGH--ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSAL 1252 (1350)
Q Consensus 1175 IreNL~~g~--~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl~~~~ILiLDEaTSaL 1252 (1350)
|||||.+|. ++++|+++++|++.++++++|++||+||||.|||+|.+||||||||||||||++|+|+|||||||||+|
T Consensus 1169 IreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaL 1248 (1321)
T 4f4c_A 1169 IAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSAL 1248 (1321)
T ss_dssp HHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCST
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 99997454999999999999999982984999717678999823889156999999999999997179989996811157
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 9898999999999844996499980692377512889999498796606946774119996459999963202
Q 000687 1253 DAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1253 D~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G~~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|++||+.|+++|++.++|||+|+||||++|+++||+|+|||+|||+|+|+|+||+++ +|.|++||+.|...
T Consensus 1249 D~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~--~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1249 DTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE--KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp TSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC--C-------------
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHC
T ss_conf 899999999999997399989996068999996999999989899998888999849--80999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1574.34 Aligned_cols=1230 Identities=41% Similarity=0.692 Sum_probs=1047.6
Q ss_pred CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CC--------HHHHHHHHH
Q ss_conf 876411889989427145889999999999979788999999999998624798-------86--------148799999
Q 000687 83 DVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNV-------NN--------MDKMMQEVL 147 (1350)
Q Consensus 83 ~~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~--------~~~~~~~~~ 147 (1350)
....+++.++++|..+.++.+++++++++++.+.+.|+++.+++.+++.+.... .. .......+.
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (1284)
T 3g5u_A 29 KKPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMT 108 (1284)
T ss_dssp ----CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 66665699999872657999999999999999999999999999999998613444332222221111100244688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999998299555714688227999999889999999999999
Q 000687 148 KYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLG 227 (1350)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~r~s~D~~~i~~~~~~~~~ 227 (1350)
.+++++++++++.+++.+++.+++.+.+++...++|.++|++++++|++|||++ ++|++++|+++|++.+++.++..+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999986998997568-8778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHH
Q ss_conf 99989999999999999996989999999999999999999999999999999999999999999980299999865289
Q 000687 228 NFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGES 307 (1350)
Q Consensus 228 ~~i~~~~~~~~~iii~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIk~~~~e~ 307 (1350)
.++..++.+++.++++++++|++++++++++|+++++..++.+..++..++.++..++..+++.|+++|+++||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999987899999999999999999999999811668779999999999999999999999
Q 000687 308 KALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPS 387 (1350)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 387 (1350)
.+.++|.+..++..+...+.....+...++..++.++.+++++|+|+.++..|.++.|.++++++.+.....++.++...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPN 347 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999929988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCC
Q ss_conf 99999999999999998824999888887876678975309999789988999998541102798628989999869999
Q 000687 388 ISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGS 467 (1350)
Q Consensus 388 ~~~~~~~~~s~~ri~~~~~~~~e~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGs 467 (1350)
+..+.++..+++|++++++.+++.+.....+..+++..|.|+++|++|+|+++++.++|+|+||++++||+++|||||||
T Consensus 348 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGs 427 (1284)
T 3g5u_A 348 IEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGC 427 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCC
T ss_conf 99999999999999999728986776665677777777718999989976999987101254589759988999899999
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHH
Q ss_conf 38999999962877997489999960788888887434688825676650128999622999999889999999972199
Q 000687 468 GKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYS 547 (1350)
Q Consensus 468 GKSTl~~~l~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~ 547 (1350)
|||||+++|.|+|+|++|+|.+||+|+++++++++|++++||+|+|++|++||+|||.+|.++.++++++++++.+++++
T Consensus 428 GKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~ 507 (1284)
T 3g5u_A 428 GKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYD 507 (1284)
T ss_dssp SHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHH
T ss_conf 79999999807889997389999998775799999865489868875377669999745798999999999999829699
Q ss_pred HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH
Q ss_conf 99509998522004999988956999999999822699876872666786989999999999986089769997259136
Q 000687 548 FIIKLPDGFDTQVGERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLST 627 (1350)
Q Consensus 548 ~i~~l~~g~~t~i~~~g~~LSgGqkqri~lARal~~~~~ililDE~ts~lD~~~~~~i~~~i~~~~~~~tvi~itH~~~~ 627 (1350)
++..+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.++...+++|+|+||||+++
T Consensus 508 ~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~ 587 (1284)
T 3g5u_A 508 FIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLST 587 (1284)
T ss_dssp HHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHH
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 99746563345014787865999999999999995299989997987777999999999999997399989999407789
Q ss_pred HHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 53039899984987988419578983268918999999999966754210024789998666788873111488888897
Q 000687 628 IRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSP 707 (1350)
Q Consensus 628 ~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1350)
+..||+|++|++|++++.|+|++++++ ++.|.+++..+.................+ ...... +............
T Consensus 588 i~~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~ 662 (1284)
T 3g5u_A 588 VRNADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQTAGNEIELGNEACKSKDE-IDNLDM--SSKDSGSSLIRRR 662 (1284)
T ss_dssp HTTCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC---------------------------------------
T ss_pred HHCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCCCCCCCCCCCCCCCC-CCCCCC--CCCCCCCCCCCCC
T ss_conf 974998999989999997889999867--87799999974300221113333332222-234433--3333332000345
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65445677677655565668972134566654423899999973033599999999999998998999999999999998
Q 000687 708 YSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVY 787 (1350)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 787 (1350)
.... ....+.. ... .....+..........+++++.+.++.|+++.+++++.++.+...+.+++++..+++.+
T Consensus 663 ~~~~--~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 735 (1284)
T 3g5u_A 663 STRK--SICGPHD---QDR--KLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVF 735 (1284)
T ss_dssp ----------------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--CCCCCCC---CCC--CCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4333--4456422---332--11024555313662589999998451579999999999999999999999999999998
Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 19863-67799999999999999999999999999999999999999999999999981885433335668569999999
Q 000687 788 YNPDH-AYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLA 866 (1350)
Q Consensus 788 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~ 866 (1350)
..... .........|..++++++++..++.+++.+++.+.+.++..++|.++|++++++|++||+.+.+++|++++|++
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~ 815 (1284)
T 3g5u_A 736 TNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLA 815 (1284)
T ss_dssp HSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHH
T ss_conf 55685033677999999999999999999999999999999999999999999999983998887578998899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 43999999997769999999999999999999998999999999999999999999999855879999999999999999
Q 000687 867 LDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGE 946 (1350)
Q Consensus 867 ~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 946 (1350)
+|++.++..++..+..++..++.+++.+++++.++|.+++++++++|+++++.++..++.+....+..+........+.|
T Consensus 816 ~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 895 (1284)
T 3g5u_A 816 NDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATE 895 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999996999999999999999999999999999999999999999999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 98009999996128999999999987899999999999855589999999999999999999999707776899999999
Q 000687 947 AIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFM 1026 (1350)
Q Consensus 947 ~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~ 1026 (1350)
++.|+++||+|+.|+.+.++|.+..+...+...+.....+...++.+.+.++.+++.+|+|++++..|.++++.++.++.
T Consensus 896 ~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~ 975 (1284)
T 3g5u_A 896 AIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFS 975 (1284)
T ss_dssp HHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99889999984659999999999999999999999999999999999999999999999999999909806999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 99999999999998899999999999999998335567899999999999999871899988998899999884211028
Q 000687 1027 VLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSL 1106 (1350)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl 1106 (1350)
.+.....++.......+.+.++..+..|+.++++.+++.++..... ..++...|.|+|+||+|+|+++++.++|+|+||
T Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl 1054 (1284)
T 3g5u_A 976 AIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQG-LKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSL 1054 (1284)
T ss_dssp HHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSC-CCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCEEECCEEE
T ss_conf 9999999999999999999999999999999983887666655566-545677785799998997799998700203059
Q ss_pred EEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCC--
Q ss_conf 983898999995999978899999852378995279999951789996876222088736777775558888524999--
Q 000687 1107 RARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE-- 1184 (1350)
Q Consensus 1107 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~-- 1184 (1350)
+|++||++||||+||||||||+++|+|+|+|++|+|.+||+|++.++++++|++++||||||.+|++||+|||.++.+
T Consensus 1055 ~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~ 1134 (1284)
T 3g5u_A 1055 EVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSR 1134 (1284)
T ss_dssp EECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSC
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCC
T ss_conf 97699889998899997899999994686789977989999800078999970268987787406666999974668778
Q ss_pred CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999981526999609987443115999999936999999999821399888983677789989899999999
Q 000687 1185 SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEAL 1264 (1350)
Q Consensus 1185 ~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L 1264 (1350)
..++++++++++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||+++++.|++.|
T Consensus 1135 ~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l 1214 (1284)
T 3g5u_A 1135 VVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEAL 1214 (1284)
T ss_dssp CCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99999999999983959999727042456117888933899999999999997499999986875557999999999999
Q ss_pred HHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCC
Q ss_conf 9844996499980692377512889999498796606946774119996459999963202454
Q 000687 1265 DRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 1328 (1350)
Q Consensus 1265 ~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G~~~eLl~~~~~g~y~~l~~~q~~~~~~ 1328 (1350)
++..+|+|+|+||||++++..||||+||++|+|+|+|+|++|+++ +|.|++||+.|.....+
T Consensus 1215 ~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~g~y~~l~~~q~~~~~~ 1276 (1284)
T 3g5u_A 1215 DKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ--KGIYFSMVSVQAGAKRS 1276 (1284)
T ss_dssp HHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS--CSHHHHHHHHHC-----
T ss_pred HHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCCCC
T ss_conf 986799989999558799980998999989989997789999847--77799999997613222
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=862.12 Aligned_cols=580 Identities=35% Similarity=0.590 Sum_probs=524.4
Q ss_pred HHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CHHHHHHHHHH
Q ss_conf 23899999973033-599999999999998998999999999999998198------------------63677999999
Q 000687 741 QASSFWRLAKMNSP-EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP------------------DHAYMIREIAK 801 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 801 (1350)
++.++++++.|..+ +++.++++.+++++.|+..|++.++++.+++..... ...........
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999981885433335668569999999439999999977699
Q 000687 802 YCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQ 881 (1350)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~ 881 (1350)
+++.+++++++..++.+++.+++.+++.+...++|.++|++++++|++|||+ +++|++++|+++|++.+++.+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999999999999998999999999999999999999999855879999999999999999980099999961289
Q 000687 882 VIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSEL 961 (1350)
Q Consensus 882 ~~i~~~~~~~~~~~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~ 961 (1350)
.++..++.+++.++++++++|.+++++++++|++++...+..+..++..++.++...+..+.+.|.+.|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999987899999999999855589999999999999999999999707776899999999999999999999988
Q 000687 962 MIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL 1041 (1350)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1350)
.+.++|.+..+...+...+.....+...++..++.++.+++++|+|.+++..|.+++|.+++++.++.....++..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999999998335567899999999999999871899988998899999884211028983898999995999
Q 000687 1042 APDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSG 1121 (1350)
Q Consensus 1042 ~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1121 (1350)
...+.++..+++|+.++++.+++.++..... ..+.+..|.|+|+||+|+||++++.++|+|+||+|+|||++||||+||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAG-RKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCC-CCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 9999999999999999971785345666556-567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf 97889999985237899527999995178999687622208873677777555888852499999999999999981526
Q 000687 1122 CGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANAD 1201 (1350)
Q Consensus 1122 SGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~~sd~ei~~al~~a~l~ 1201 (1350)
||||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||||.||+|||||||.+|+++++++++++||+.++++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 99960998744311599999993699999999982139988898367778998989999999998449964999806923
Q 000687 1202 KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLS 1281 (1350)
Q Consensus 1202 ~~I~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ 1281 (1350)
++|+.||+|+||.|||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+|||+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 77512889999498796606946774119996459999963202
Q 000687 1282 TIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1282 ti~~~DrI~vl~~GrIve~G~~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
++++||+|+||++|+|+|+|+|+||+++ +|.|++|++.|...
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~--~g~y~~l~~~q~~~ 656 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQ--QGLYYDLVTAQTFT 656 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTT--TCHHHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHH--HHHHHHHHHHHHCC
T ss_conf 8986898999639965136899999985--32799999962212
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=789.17 Aligned_cols=578 Identities=38% Similarity=0.630 Sum_probs=515.8
Q ss_pred HHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHH
Q ss_conf 899999973033-59999999999999899899999999999999819863-----------------677999999999
Q 000687 743 SSFWRLAKMNSP-EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDH-----------------AYMIREIAKYCY 804 (1350)
Q Consensus 743 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 804 (1350)
..+++++.+..+ .|+.++++++++++.++..++++++++.+++.+..... .........+.+
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999981885433335668569999999439999999977699999
Q 000687 805 LLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIV 884 (1350)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i 884 (1350)
++++++++..++.+++.+++.+.+.+...++|.++|++++++|++||++ +++|++++|+++|++.++..++..+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756--88778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999998999999999999999999999999855879999999999999999980099999961289999
Q 000687 885 QNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIV 964 (1350)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~ 964 (1350)
..++.+++.++++++++|++++++++++|++++...+..+..++..++.++..++...++.|++.|+++||+|+.|+.+.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999987899999999999855589999999999999999999999707776899999999999999999999988999
Q 000687 965 GLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD 1044 (1350)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1350)
++|.+..+...+...+.....+...++..++.++.+++++|+|++++..|.++.|.+++++..+.....++.........
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCH
Q ss_conf 99999999999998335567899999999999999871899988998899999884211028983898999995999978
Q 000687 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGK 1124 (1350)
Q Consensus 1045 ~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGK 1124 (1350)
+.++..+++|+.++++.+++.++..... ..+....|.|+|+||+|+|+++++.++|+|+||+|+|||++||||+|||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGK 429 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSG-HKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK 429 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSC-CCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCH
T ss_conf 9999999999999972898677666567-777777771899998997699998710125458975998899989999979
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH
Q ss_conf 89999985237899527999995178999687622208873677777555888852499999999999999981526999
Q 000687 1125 SSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1125 STL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~~sd~ei~~al~~a~l~~~I 1204 (1350)
|||+++|+|+|+|++|+|.+||+|+++++++++|++|+||||+|.||++||+|||.+|.++.++++++++++.+++++++
T Consensus 430 STl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i 509 (1284)
T 3g5u_A 430 STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFI 509 (1284)
T ss_dssp HHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 99999980788999738999999877579999986548986887537766999974579899999999999982969999
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHH
Q ss_conf 60998744311599999993699999999982139988898367778998989999999998449964999806923775
Q 000687 1205 SSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1205 ~~lp~Gldt~vge~G~~LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~ 1284 (1350)
+++|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++...+|+|+|+||||++++.
T Consensus 510 ~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 510 MKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf 74656334501478786599999999999999529998999798777799999999999999739998999940778997
Q ss_pred HCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 12889999498796606946774119996459999963202
Q 000687 1285 NAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1285 ~~DrI~vl~~GrIve~G~~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
.||+|+||++|+++|.|+|++|+++ +|.|++++..|...
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~~~ 628 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQTAG 628 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC--
T ss_pred CCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHC
T ss_conf 4998999989999997889999867--87799999974300
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=740.88 Aligned_cols=566 Identities=26% Similarity=0.394 Sum_probs=457.1
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99730335999999999999989989999999999999981986367799999999999999999999999999999999
Q 000687 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++.+.+++++.+.+++++.++.+++..+.++++..+++........ .....+..+++++.++..++.+++.++..+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGDF---SLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998736987---9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998188543333566856999999943999999997769999999999999999999998999999
Q 000687 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~li 907 (1350)
+.+...++|.++|+++++.|+.||++ +++|++++|+++|++.+++.+...+..++...+.+++.+++++.++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997889799765--8889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999985587999999999999999998009999996128999999999987899999999999855
Q 000687 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++++|++++...+..+..++..++.++...+....+.|.+.|+++||+|++|+.+.++|.+..+...+...+.......
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 58999999999999999999999970777689999999999999999999998899999999999999998335567899
Q 000687 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 1067 (1350)
..++..++..+..++++|+|++++..|.+++|.++++..+......++..+......+.++..+.+|+.++++.+++.++
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 99999999999987189998899889999988421102898389899999599997889999985237899527999995
Q 000687 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
... .. ..++..+.|+++||+|+|+++ +.++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+
T Consensus 329 ~~~-~~-~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 329 ADN-AL-ALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CTT-CB-CCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CCC-CC-CCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 877-65-668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred CCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 17899968762220887367777755588885249999999999999998152699960998744311599999993699
Q 000687 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1148 di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.++++++++.+|+|+||.++++|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998213998889836777899898999999999844996499980692377512889999498796606946774
Q 000687 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1228 QrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G~~~eLl 1307 (1350)
||+|||||++++|+|||||||||+||+++++.|++.+++..+|+|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972999999979754479999999999999867999899982276889819989999899899978899998
Q ss_pred HCCCCCHHHHHHHHHH
Q ss_conf 1199964599999632
Q 000687 1308 KNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~~q~ 1323 (1350)
++ ++.|+++++.|.
T Consensus 566 ~~--~~~~~~~~~~~~ 579 (587)
T 3qf4_A 566 EH--CKPYREIYESQF 579 (587)
T ss_dssp HH--CHHHHHHHHHHC
T ss_pred HC--CCHHHHHHHHHH
T ss_conf 67--839999999984
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=740.23 Aligned_cols=571 Identities=27% Similarity=0.439 Sum_probs=500.5
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999999730335999999999999989989999999999999981986367799999999999999999999999999
Q 000687 742 ASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQH 821 (1350)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 821 (1350)
...+++++.+.++.++.+.+++++.++.+++..+.+++++.+++........ .....++.+++++.++..++.+++.
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF---DLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG---GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999999999999999999999999999999736888---9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998188543333566856999999943999999997769999999999999999999998
Q 000687 822 SFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQ 901 (1350)
Q Consensus 822 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 901 (1350)
++....+.+...++|.++|++++++|++||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997799999768--8889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999985587999999999999999998009999996128999999999987899999999
Q 000687 902 WRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 902 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 981 (1350)
|++++++++++|+.++...+..+..++..++.++...+..+.+.|.+.|+++||+|++|+.+.++|.+..+...+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99985558999999999999999999999970777689999999999999999999998899999999999999998335
Q 000687 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~ 1061 (1350)
....+....+..++..+..++++++|++++..|.+++|.+++++.+......++..+......+.++..+.+|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 56789999999999999987189998899889999988421102898389899999599997889999985237899527
Q 000687 1062 KTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGR 1141 (1350)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1141 (1350)
+++.+.. ... ..++..+.|+++||+|+|++ +.++|+|+||+|++||++||||+||||||||+++|+|+++|++|+
T Consensus 337 ~~~~~~~--~~~-~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 411 (598)
T 3qf4_B 337 EEEKDDP--DAV-ELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQ 411 (598)
T ss_dssp CCCCCCS--SCC-CCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEE
T ss_pred CCCCCCC--CCC-CCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
T ss_conf 8777777--777-77777771899998997799--986012227998699889998999996999999994585799808
Q ss_pred EEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999517899968762220887367777755588885249999999999999998152699960998744311599999
Q 000687 1142 VMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1142 I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
|.+||+|+++++.+++|++++||||+|.+|++|++|||.+++++.++++++++++.++++++++.+|+|++|.++++|.+
T Consensus 412 i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~ 491 (598)
T 3qf4_B 412 ILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGED 491 (598)
T ss_dssp EEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTT
T ss_pred EEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCC
T ss_conf 99999983018899998410899079823246399997447999999999999999697888974645323642278898
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99369999999998213998889836777899898999999999844996499980692377512889999498796606
Q 000687 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1222 LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G 1301 (1350)
||||||||+|||||++++|+|||||||||+||++++..+++.+++..+|+|+|+||||++++..||+|++|++|+++|.|
T Consensus 492 LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 571 (598)
T 3qf4_B 492 LSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMG 571 (598)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999964999999989766799999999999999980899899994277899719989999899999877
Q ss_pred CHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 94677411999645999996320
Q 000687 1302 SHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1302 ~~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
+|++|+++ +|.|++++..|..
T Consensus 572 ~~~~l~~~--~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 572 KHDELIQK--RGFYYELFTSQYG 592 (598)
T ss_dssp CHHHHHHT--TCHHHHHHHHHHG
T ss_pred CHHHHHHC--CCHHHHHHHHHHH
T ss_conf 89999867--8779999999764
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=737.11 Aligned_cols=571 Identities=27% Similarity=0.408 Sum_probs=480.8
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99997303359999999999999899899999999999999819863----67799999999999999999999999999
Q 000687 746 WRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDH----AYMIREIAKYCYLLIGLSSAELLFNTLQH 821 (1350)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 821 (1350)
++++++.+++++.+++++++.++..+...+.+++..++++....... .........+..+++++.++..++.+++.
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998188543333566856999999943999999997769999999999999999999998
Q 000687 822 SFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQ 901 (1350)
Q Consensus 822 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 901 (1350)
++..+.+.+...++|.++|+++++.|++||++ +++|++++|+++|++.+++.+...+..++...+.+++.+++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999985587999999999999999998009999996128999999999987899999999
Q 000687 902 WRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 902 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 981 (1350)
|+++++.++++|++++...+..+..++..++..+...+..+.+.|.+.|+++||+|++|+.+.++|.+..+...+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99985558999999999999999999999970777689999999999999999999998899999999999999998335
Q 000687 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~ 1061 (1350)
....+...++...+..+..++++++|++++..|.+++|.++++..+......++..+......+.++..+.+|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 56789999999999999987189998899889999988421102898389899999599997889999985237899527
Q 000687 1062 KTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGR 1141 (1350)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1141 (1350)
+++.++.. ... ..+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+++|++|+
T Consensus 321 ~~~~~~~~-~~~-~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 321 DYDIKNGV-GAQ-PIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCSSCCCT-TCC-CCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCC-CCC-CCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 97666787-766-667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999517899968762220887367777755588885249999999999999998152699960998744311599999
Q 000687 1142 VMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1142 I~idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
|.+||.|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.++++++++++|+|+||.++++|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99369999999998213998889836777899898999999999844996499980692377512889999498796606
Q 000687 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1222 LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G 1301 (1350)
||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9467741199964599999632
Q 000687 1302 SHSHLLKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1302 ~~~eLl~~~~~g~y~~l~~~q~ 1323 (1350)
+|+||+++ ++.|+++++.|+
T Consensus 558 ~~~el~~~--~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAK--QGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHT--TSHHHHHHTTTT
T ss_pred CHHHHHHC--CCHHHHHHHHHC
T ss_conf 89999858--838999998506
No 8
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=722.87 Aligned_cols=576 Identities=33% Similarity=0.521 Sum_probs=483.4
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999730335999999999999989989999999999999981986367799999999999999999999999999999
Q 000687 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++.+.++.++.+.+++++.++.+++.++.+++.+.+++................+...++++.++..++.+.+.++.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 7 ARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998878999999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998188543333566856999999943999999997769999999999999999999998999
Q 000687 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 904 (1350)
.+.+.+...++|.++|+++++.|++||++ +++|++++|+++|++.++..+...+..++...+.+++.++++++++|++
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777--9848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999985587999999999999999998009999996128999999999987899999999999
Q 000687 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++.+|+.++...+..+..++..++.++...+..+.+.|.+.|+++||+|+.|+.+.++|.+..+...+...+....
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 85558999999999999999999999970777689999999999999999999998899999999999999998335567
Q 000687 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~~ 1064 (1350)
.....++..++..+..++++|+|++++..|.+++|.+++++.+......++..+......+.++..+++|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 899999999999999871-8999889988999998842110289838989999959999788999998523789952799
Q 000687 1065 IEPDDPDATPVPDRLRGE-VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~-I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
.++.. .. +.+....+. |+++||+|+|+++++.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.
T Consensus 325 ~~~~~-~~-~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 325 LPFNE-GV-ILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SCSSC-SB-CCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCCC-CC-CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 67777-87-77767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCC---CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 999517899968762220887367777755588885249999---99999999999815269996099874431159999
Q 000687 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES---ATESEIIEAARLANADKFISSLPDGYKTFVGERGV 1220 (1350)
Q Consensus 1144 idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~~~---~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~ 1220 (1350)
+||+|+++++.+++|++++||||+|.+|++|++|||.++.+. .++++++++++.++++++++++|+|+||.++++|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 99936999999999821399888983677789989899999999984499649998069237751288999949879660
Q 000687 1221 QLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1221 ~LSgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~ 1300 (1350)
+||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||++++..||+|++|++|++++.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 6946774119996459999963202
Q 000687 1301 GSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1301 G~~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|+|++|+++ +++.|+++++.|...
T Consensus 563 g~~~~l~~~-~~~~~~~~~~~q~~~ 586 (595)
T 2yl4_A 563 GKHEELLSK-PNGIYRKLMNKQSFI 586 (595)
T ss_dssp ECSCC-------C------------
T ss_pred CCHHHHHHC-CCHHHHHHHHHHHCC
T ss_conf 889999747-872999999974302
No 9
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=720.16 Aligned_cols=573 Identities=28% Similarity=0.415 Sum_probs=499.6
Q ss_pred CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76411889989427145889999999999979788999999999998624798861487999999999999999999999
Q 000687 84 VTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 84 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
.+...++++++|+++. +..+++++++.++...+....+.+++.++|..... .+. ..+..+.++++++.++..++
T Consensus 6 ~g~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~ 79 (587)
T 3qf4_A 6 GGGGGSKTLARYLKPY-WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIAR-GDF----SLVLKTGILMLIVALIGAVG 79 (587)
T ss_dssp --CCCCCCGGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TCH----HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCH----HHHHHHHHHHHHHHHHHHHH
T ss_conf 9853499999999999-99999999999999999999999999999998736-987----99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999982995557146882279999998899999999999999998999999999999
Q 000687 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG 243 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~r~s~D~~~i~~~~~~~~~~~i~~~~~~~~~iii~ 243 (1350)
.+++.++..+.+.++..++|.++|++++++|+.||++. ++|++++|+++|++.+++.+...+..++..++.+++.++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l 158 (587)
T 3qf4_A 80 GIGCTVFASYASQNFGADLRRDLFRKVLSFSISNVNRF-HTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMA 158 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999978897997658-88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99969899999999999999999999999999999999999999999999802999998652899999999999999999
Q 000687 244 FSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRL 323 (1350)
Q Consensus 244 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIk~~~~e~~~~~~~~~~~~~~~~~ 323 (1350)
+.++|++++++++.+|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+.
T Consensus 159 ~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~ 238 (587)
T 3qf4_A 159 VSINVKLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRS 238 (587)
T ss_dssp HHHCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999999999999999999999999999999999999999999855999998621499999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999878999999999999999999999998116687799999999999999999999999999999999999999
Q 000687 324 GYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFR 403 (1350)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 403 (1350)
..+.........++..++..+..++++++|++++.+|.++.|..++++.+......++..+...+..+.++..+++|+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 318 (587)
T 3qf4_A 239 IISAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLE 318 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998499389999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf 88249998888878766789753099997899889999985411027986289899998699993899999996287799
Q 000687 404 IIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT 483 (1350)
Q Consensus 404 ~~~~~~e~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~~~~~~~ 483 (1350)
+++.+++.+.. ......++..+.|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|.|+++|+
T Consensus 319 ~l~~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~ 396 (587)
T 3qf4_A 319 VLNEKPAIEEA-DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPE 396 (587)
T ss_dssp HHHCCCSCCCC-TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCS
T ss_pred HHCCCCCCCCC-CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 97689765788-7765668888807997889984899-976421117998699889998999997999999992786699
Q ss_pred CCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCC
Q ss_conf 74899999607888888874346888256766501289996229999998899999999721999950999852200499
Q 000687 484 SGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVGER 563 (1350)
Q Consensus 484 ~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~i~~~ 563 (1350)
+|+|.+||+|+++++.+++|++++||||+|++|++|++|||.++.+..++++++++++.+++++++..+|+|++|.++++
T Consensus 397 ~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~ 476 (587)
T 3qf4_A 397 RGRVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERG 476 (587)
T ss_dssp EEEEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSS
T ss_pred CCEEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCC
T ss_conf 86798999983407899998413897789867675599998524889999999999999684999975653121275189
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEE
Q ss_conf 99889569999999998226998768726667869899999999999860897699972591365303989998498798
Q 000687 564 GVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVS 643 (1350)
Q Consensus 564 g~~LSgGqkqri~lARal~~~~~ililDE~ts~lD~~~~~~i~~~i~~~~~~~tvi~itH~~~~~~~~d~i~vl~~G~i~ 643 (1350)
|.+||||||||++||||++++|++++||||||+||+++++.+++.++++.+++|+|+||||++++..||+|++|++|+++
T Consensus 477 ~~~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~ 556 (587)
T 3qf4_A 477 GRNFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVA 556 (587)
T ss_dssp SCSSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEE
T ss_conf 89929999999999999972999999979754479999999999999867999899982276889819989999899899
Q ss_pred EECCHHHHHHCCCCCHHHHHHHHH
Q ss_conf 841957898326891899999999
Q 000687 644 EIGTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 644 ~~g~~~~l~~~~~~~~~~~l~~~~ 667 (1350)
+.|+|+|++++ ++.|.+++..+
T Consensus 557 ~~g~~~el~~~--~~~~~~~~~~~ 578 (587)
T 3qf4_A 557 GFGTHKELLEH--CKPYREIYESQ 578 (587)
T ss_dssp EEECHHHHHHH--CHHHHHHHHHH
T ss_pred EECCHHHHHHC--CCHHHHHHHHH
T ss_conf 97889999867--83999999998
No 10
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=718.91 Aligned_cols=568 Identities=31% Similarity=0.461 Sum_probs=497.9
Q ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999973033599999999999998998999999999999998198636779999999999999999999999999999
Q 000687 744 SFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSF 823 (1350)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (1350)
.+++++.+.++.++.+.+++++.++.+++..+.+++...+++........ .........++++.++..++.++..++
T Consensus 12 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (582)
T 3b5x_A 12 TFKRLWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAES---NFLRILPFMILGLMFVRGLSGFASSYC 88 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999889999999999999999999999999999999998646866---799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999818854333356685699999994399999999776999999999999999999999899
Q 000687 824 WDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWR 903 (1350)
Q Consensus 824 ~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~r~~~D~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 903 (1350)
..+.+.+...++|.++++++++.|+.||++ +++|++++|+++|++.++..+...+..++...+.+++.++++++++|+
T Consensus 89 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 166 (582)
T 3b5x_A 89 LSWVSGNVVMQMRRRLFNHFMHMPVRFFDQ--ESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998699999778--987899999998899999999999999999999999999999998299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998558799999999999999999800999999612899999999998789999999999
Q 000687 904 LALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQ 983 (1350)
Q Consensus 904 l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 983 (1350)
+++++++++|+.++...+..+..++..++..+...+..+.+.|.+.|+++||+|+.|+.+.++|.+..+...+...+...
T Consensus 167 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3b5x_A 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVS 246 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999951999997087599999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 98555899999999999999999999997077768999999999999999999999889999999999999999833556
Q 000687 984 IAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~l~~~~ 1063 (1350)
.......+..++..+..++++|+|++++..|.+++|.+++++.+......++..+......+.++..+.+|+.++++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 326 (582)
T 3b5x_A 247 AQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLET 326 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599889999999999999999999999999999999999999999975897
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 78999999999999998718999889988999998842110289838989999959999788999998523789952799
Q 000687 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.++. ..+. +...+.|+++||+|+|+++ +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.
T Consensus 327 ~~~~~---~~~~-~~~~~~i~~~~v~~~y~~~-~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~ 401 (582)
T 3b5x_A 327 ERDNG---KYEA-ERVNGEVDVKDVTFTYQGK-EKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSIC 401 (582)
T ss_pred CCCCC---CCCC-CCCCCEEEEEEEEEECCCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 67777---7777-7788828999989972899-86540041699879998999899999799999999657789998798
Q ss_pred ECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCC-CCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 9995178999687622208873677777555888852499-999999999999981526999609987443115999999
Q 000687 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGH-ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1144 idG~di~~~~~~~lR~~i~~VpQd~~LF~gTIreNL~~g~-~~~sd~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
+||.|+++++.+++|++++||||+|.+|++|++|||.++. ++.++++++++++.++++++++++|+||||.++++|.+|
T Consensus 402 ~~g~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~L 481 (582)
T 3b5x_A 402 LDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSL 481 (582)
T ss_pred ECCEEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCC
T ss_conf 99998563889999648589827990531029999856688999999999999987989999847653345106888847
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEECC
Q ss_conf 93699999999982139988898367778998989999999998449964999806923775128899994987966069
Q 000687 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaLARALl~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vl~~GrIve~G~ 1302 (1350)
|||||||++||||++++|+|++||||||+||+++++.+++.|++..+|+|+|+||||++++..||+|++|++|++++.|+
T Consensus 482 SgGq~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~ 561 (582)
T 3b5x_A 482 SGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGR 561 (582)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999785446899999999999999728998999936889998199899998998999778
Q ss_pred HHHHHHCCCCCHHHHHHHHHH
Q ss_conf 467741199964599999632
Q 000687 1303 HSHLLKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~~~q~ 1323 (1350)
|++|+++ ++.|+++++.|.
T Consensus 562 ~~~l~~~--~~~~~~~~~~q~ 580 (582)
T 3b5x_A 562 HADLLAQ--DGAYAQLHRIQF 580 (582)
T ss_pred HHHHHHC--CCHHHHHHHHHH
T ss_conf 9999848--858999999861
Done!