Query 000689
Match_columns 1350
No_of_seqs 914 out of 4670
Neff 8.1
Searched_HMMs 46136
Date Mon Apr 1 21:56:13 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000689.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000689hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 5E-225 1E-229 2068.8 129.6 1216 86-1324 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 7E-176 2E-180 1757.3 155.8 1221 85-1322 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 1E-166 3E-171 1585.0 127.1 1094 172-1322 263-1375(1381)
4 PLN03130 ABC transporter C fam 100.0 2E-157 4E-162 1593.8 150.9 1156 105-1325 304-1477(1622)
5 PLN03232 ABC transporter C fam 100.0 1E-156 3E-161 1588.8 146.4 1154 105-1325 304-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 1E-151 3E-156 1541.6 151.3 1189 88-1321 307-1519(1522)
7 PTZ00243 ABC transporter; Prov 100.0 5E-145 1E-149 1471.0 150.1 1169 105-1324 247-1548(1560)
8 TIGR01271 CFTR_protein cystic 100.0 5E-143 1E-147 1452.9 149.4 1170 112-1328 90-1458(1490)
9 KOG0058 Peptide exporter, ABC 100.0 2E-112 5E-117 1006.6 68.4 574 86-669 132-706 (716)
10 KOG0055 Multidrug/pheromone ex 100.0 3E-111 7E-116 1049.6 72.5 656 6-668 545-1226(1228)
11 KOG0058 Peptide exporter, ABC 100.0 2E-110 4E-115 990.8 66.5 575 743-1325 133-707 (716)
12 COG2274 SunT ABC-type bacterio 100.0 5.7E-93 1.2E-97 881.9 74.4 570 86-667 139-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 1.5E-91 3.3E-96 869.2 71.8 557 755-1322 152-708 (709)
14 PTZ00265 multidrug resistance 100.0 7E-88 1.5E-92 906.3 77.5 570 88-667 812-1465(1466)
15 PRK11174 cysteine/glutathione 100.0 3.7E-87 8E-92 846.4 76.7 568 88-668 9-585 (588)
16 COG1132 MdlB ABC-type multidru 100.0 1.9E-86 4.1E-91 835.0 76.5 562 89-668 4-565 (567)
17 COG1132 MdlB ABC-type multidru 100.0 6.1E-86 1.3E-90 830.3 75.2 553 755-1323 13-565 (567)
18 TIGR00958 3a01208 Conjugate Tr 100.0 1.5E-85 3.3E-90 842.4 76.4 566 85-663 145-710 (711)
19 PRK11174 cysteine/glutathione 100.0 1.2E-84 2.6E-89 823.4 75.1 568 745-1324 10-586 (588)
20 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-83 2.5E-88 826.5 78.8 564 87-667 121-685 (686)
21 TIGR00958 3a01208 Conjugate Tr 100.0 5.2E-84 1.1E-88 828.2 75.0 565 743-1319 147-711 (711)
22 TIGR01193 bacteriocin_ABC ABC- 100.0 6.5E-84 1.4E-88 831.6 76.1 565 87-665 142-707 (708)
23 PRK11160 cysteine/glutathione 100.0 4.5E-83 9.7E-88 802.3 77.2 567 89-665 4-572 (574)
24 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3E-83 6.5E-88 826.6 75.8 565 87-664 140-709 (710)
25 KOG0056 Heavy metal exporter H 100.0 2.5E-86 5.4E-91 735.8 37.4 548 112-669 225-776 (790)
26 TIGR03375 type_I_sec_LssB type 100.0 8.3E-83 1.8E-87 819.6 76.1 557 87-654 133-689 (694)
27 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.5E-82 5.5E-87 814.1 76.7 553 754-1322 133-685 (686)
28 TIGR01193 bacteriocin_ABC ABC- 100.0 5.1E-82 1.1E-86 814.1 74.2 563 745-1320 144-707 (708)
29 PRK11176 lipid transporter ATP 100.0 2.7E-81 5.9E-86 792.5 76.7 566 89-667 13-579 (582)
30 PRK11160 cysteine/glutathione 100.0 3.5E-81 7.6E-86 785.2 75.6 565 747-1321 6-573 (574)
31 KOG0056 Heavy metal exporter H 100.0 1.2E-84 2.6E-89 722.4 38.0 505 813-1325 272-777 (790)
32 TIGR01846 type_I_sec_HlyB type 100.0 5.8E-81 1.3E-85 801.7 78.1 568 87-667 125-692 (694)
33 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.5E-81 5.4E-86 808.7 73.9 561 748-1319 145-709 (710)
34 COG4988 CydD ABC-type transpor 100.0 1.2E-80 2.5E-85 725.5 71.2 552 107-669 5-557 (559)
35 PRK10790 putative multidrug tr 100.0 1.6E-80 3.5E-85 785.8 78.1 566 89-669 11-577 (592)
36 KOG0057 Mitochondrial Fe/S clu 100.0 2.7E-81 5.8E-86 716.3 61.4 571 88-668 12-587 (591)
37 TIGR00957 MRP_assoc_pro multi 100.0 2.3E-81 5.1E-86 853.7 71.5 568 86-666 949-1519(1522)
38 TIGR03375 type_I_sec_LssB type 100.0 2E-80 4.4E-85 797.5 74.8 553 750-1312 140-692 (694)
39 PLN03130 ABC transporter C fam 100.0 5.7E-81 1.2E-85 847.2 73.2 644 6-669 797-1476(1622)
40 COG4988 CydD ABC-type transpor 100.0 5.3E-80 1.1E-84 720.0 70.1 551 763-1324 6-557 (559)
41 PRK10790 putative multidrug tr 100.0 6.9E-80 1.5E-84 780.0 77.2 567 745-1325 11-578 (592)
42 TIGR02203 MsbA_lipidA lipid A 100.0 8.5E-80 1.8E-84 778.2 76.2 565 90-667 3-568 (571)
43 PRK11176 lipid transporter ATP 100.0 8.5E-80 1.8E-84 778.8 76.1 563 749-1323 17-580 (582)
44 TIGR01192 chvA glucan exporter 100.0 2E-79 4.4E-84 770.1 78.4 564 89-667 7-570 (585)
45 TIGR02868 CydC thiol reductant 100.0 5.8E-80 1.3E-84 771.0 70.0 526 90-625 2-529 (529)
46 PRK13657 cyclic beta-1,2-gluca 100.0 5E-79 1.1E-83 770.8 78.6 566 88-668 6-571 (588)
47 TIGR01846 type_I_sec_HlyB type 100.0 3.6E-79 7.7E-84 785.1 76.2 557 754-1322 136-692 (694)
48 PRK10789 putative multidrug tr 100.0 4.3E-79 9.3E-84 766.3 74.1 541 118-669 11-552 (569)
49 TIGR02204 MsbA_rel ABC transpo 100.0 1.8E-78 3.8E-83 766.4 77.3 570 89-667 6-575 (576)
50 KOG0057 Mitochondrial Fe/S clu 100.0 1.2E-79 2.6E-84 702.8 59.0 544 770-1324 43-588 (591)
51 PLN03232 ABC transporter C fam 100.0 1.4E-79 3.1E-84 835.1 70.5 647 6-669 797-1473(1495)
52 KOG0054 Multidrug resistance-a 100.0 3.7E-80 7.9E-85 791.2 59.2 649 6-665 700-1373(1381)
53 PTZ00243 ABC transporter; Prov 100.0 1.3E-78 2.9E-83 823.5 76.5 507 158-668 1009-1547(1560)
54 TIGR02203 MsbA_lipidA lipid A 100.0 4.1E-78 8.9E-83 762.8 75.5 563 748-1322 5-568 (571)
55 PRK13657 cyclic beta-1,2-gluca 100.0 2.1E-77 4.6E-82 756.0 76.8 567 744-1324 6-572 (588)
56 TIGR02868 CydC thiol reductant 100.0 6.3E-78 1.4E-82 752.6 70.1 523 750-1280 6-529 (529)
57 COG4987 CydC ABC-type transpor 100.0 8.1E-78 1.8E-82 687.7 64.5 504 808-1321 66-572 (573)
58 TIGR01192 chvA glucan exporter 100.0 6.9E-77 1.5E-81 747.2 77.9 567 745-1325 7-573 (585)
59 PRK10789 putative multidrug tr 100.0 6.1E-77 1.3E-81 746.9 72.7 542 773-1325 11-553 (569)
60 TIGR02857 CydD thiol reductant 100.0 6.4E-77 1.4E-81 743.6 72.3 525 104-637 5-529 (529)
61 TIGR02204 MsbA_rel ABC transpo 100.0 1.4E-76 3E-81 749.2 75.9 566 749-1322 10-575 (576)
62 COG5265 ATM1 ABC-type transpor 100.0 8.8E-79 1.9E-83 673.1 41.4 491 169-665 4-496 (497)
63 COG5265 ATM1 ABC-type transpor 100.0 9E-79 1.9E-83 673.0 40.1 493 821-1320 3-496 (497)
64 COG4987 CydC ABC-type transpor 100.0 9.9E-76 2.2E-80 670.5 64.8 503 155-665 66-571 (573)
65 TIGR01842 type_I_sec_PrtD type 100.0 2.5E-75 5.3E-80 729.9 74.2 533 105-654 9-543 (544)
66 COG1123 ATPase components of v 100.0 2.5E-77 5.4E-82 702.1 46.7 483 427-1321 5-531 (539)
67 TIGR02857 CydD thiol reductant 100.0 8.3E-75 1.8E-79 724.5 71.0 526 758-1292 4-529 (529)
68 TIGR01842 type_I_sec_PrtD type 100.0 4.5E-73 9.8E-78 709.5 72.9 535 758-1309 7-543 (544)
69 TIGR01194 cyc_pep_trnsptr cycl 100.0 3E-72 6.5E-77 701.7 68.7 535 87-645 3-551 (555)
70 TIGR01271 CFTR_protein cystic 100.0 4.5E-72 9.8E-77 760.2 73.9 501 159-670 937-1455(1490)
71 PRK10261 glutathione transport 100.0 5.6E-74 1.2E-78 723.4 48.8 501 426-1320 11-565 (623)
72 PRK13549 xylose transporter AT 100.0 1E-73 2.2E-78 708.5 44.7 462 427-1307 5-493 (506)
73 PRK15134 microcin C ABC transp 100.0 1.5E-72 3.3E-77 701.8 51.5 465 427-1309 5-516 (529)
74 PRK09700 D-allose transporter 100.0 2.1E-72 4.5E-77 698.1 46.7 459 427-1305 5-495 (510)
75 COG4172 ABC-type uncharacteriz 100.0 1.2E-71 2.6E-76 610.8 43.0 473 427-1318 6-525 (534)
76 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.1E-69 2.3E-74 678.6 66.5 535 744-1300 4-551 (555)
77 PRK10762 D-ribose transporter 100.0 5.9E-72 1.3E-76 691.9 45.3 454 427-1307 4-483 (501)
78 TIGR03269 met_CoM_red_A2 methy 100.0 6.8E-72 1.5E-76 695.1 44.2 458 428-1309 1-518 (520)
79 TIGR01257 rim_protein retinal- 100.0 1.3E-68 2.8E-73 713.3 74.9 225 426-659 927-1155(2272)
80 PRK11288 araG L-arabinose tran 100.0 1.4E-71 3.1E-76 688.5 43.4 456 427-1307 4-484 (501)
81 TIGR02633 xylG D-xylose ABC tr 100.0 3.9E-71 8.4E-76 685.7 46.0 459 428-1305 2-489 (500)
82 PRK15439 autoinducer 2 ABC tra 100.0 9.5E-71 2.1E-75 681.3 49.0 467 426-1309 10-493 (510)
83 COG4618 ArpD ABC-type protease 100.0 1.3E-69 2.7E-74 613.6 53.5 535 103-654 25-561 (580)
84 COG4618 ArpD ABC-type protease 100.0 2.4E-69 5.3E-74 611.3 53.0 494 804-1309 67-561 (580)
85 PRK10982 galactose/methyl gala 100.0 2.2E-70 4.8E-75 676.8 43.9 453 430-1306 1-478 (491)
86 PRK10938 putative molybdenum t 100.0 2.5E-69 5.4E-74 667.9 45.3 453 427-1301 3-485 (490)
87 TIGR00956 3a01205 Pleiotropic 100.0 4.4E-67 9.6E-72 705.3 69.0 212 1082-1304 759-989 (1394)
88 PRK10522 multidrug transporter 100.0 2.1E-66 4.5E-71 649.2 68.6 524 93-649 5-535 (547)
89 PRK15064 ABC transporter ATP-b 100.0 1E-67 2.2E-72 658.6 55.1 483 427-1309 1-526 (530)
90 PRK11819 putative ABC transpor 100.0 2.9E-66 6.3E-71 647.2 55.9 483 427-1309 6-534 (556)
91 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-65 2.5E-70 642.0 56.4 482 427-1308 4-531 (552)
92 PRK10522 multidrug transporter 100.0 2.6E-64 5.6E-69 630.4 66.1 471 813-1306 61-537 (547)
93 TIGR00954 3a01203 Peroxysomal 100.0 2.6E-64 5.6E-69 637.8 63.5 531 88-639 78-653 (659)
94 PRK10636 putative ABC transpor 100.0 1.7E-64 3.8E-69 637.1 54.4 200 1082-1307 312-516 (638)
95 PLN03140 ABC transporter G fam 100.0 5.1E-63 1.1E-67 661.9 64.5 213 1082-1304 867-1106(1470)
96 PRK11147 ABC transporter ATPas 100.0 1.5E-62 3.2E-67 621.7 56.4 200 1082-1307 319-527 (635)
97 PLN03073 ABC transporter F fam 100.0 6.4E-63 1.4E-67 622.7 50.9 200 1082-1307 508-713 (718)
98 COG1129 MglA ABC-type sugar tr 100.0 3.7E-63 8.1E-68 579.2 42.6 452 427-1300 8-482 (500)
99 TIGR00954 3a01203 Peroxysomal 100.0 2E-60 4.3E-65 602.4 63.9 532 743-1294 77-653 (659)
100 PRK13409 putative ATPase RIL; 100.0 2.5E-62 5.5E-67 607.7 38.5 193 1082-1303 340-537 (590)
101 COG0488 Uup ATPase components 100.0 2.5E-60 5.4E-65 572.7 49.4 485 427-1309 3-526 (530)
102 COG3845 ABC-type uncharacteriz 100.0 6.7E-60 1.5E-64 537.8 41.7 462 427-1305 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.2E-53 9E-58 478.4 27.1 238 1081-1323 1-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 6.6E-52 1.4E-56 425.3 22.6 228 427-664 2-236 (240)
105 COG1135 AbcC ABC-type metal io 100.0 7.9E-50 1.7E-54 430.5 22.2 234 427-665 1-243 (339)
106 COG1126 GlnQ ABC-type polar am 100.0 1.9E-49 4.1E-54 407.2 21.4 214 1082-1309 2-226 (240)
107 COG1125 OpuBA ABC-type proline 100.0 4.3E-49 9.3E-54 411.4 20.7 228 427-664 1-236 (309)
108 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.2E-48 7E-53 438.6 28.5 238 426-668 1-238 (275)
109 COG1117 PstB ABC-type phosphat 100.0 2E-48 4.3E-53 397.0 19.4 220 427-656 7-240 (253)
110 PRK14257 phosphate ABC transpo 100.0 6.6E-48 1.4E-52 447.3 25.9 224 1078-1309 76-314 (329)
111 COG1135 AbcC ABC-type metal io 100.0 3.4E-48 7.4E-53 417.9 21.6 216 1083-1309 2-232 (339)
112 KOG0927 Predicted transporter 100.0 9.4E-47 2E-51 430.3 31.8 194 1082-1300 389-587 (614)
113 COG1117 PstB ABC-type phosphat 100.0 4.8E-47 1E-51 386.9 18.1 218 1082-1309 7-238 (253)
114 PRK14257 phosphate ABC transpo 100.0 4.6E-46 9.9E-51 431.9 27.9 225 424-656 77-316 (329)
115 cd03252 ABCC_Hemolysin The ABC 100.0 8.3E-46 1.8E-50 414.8 27.9 236 1083-1321 1-236 (237)
116 COG4615 PvdE ABC-type sideroph 100.0 5.2E-43 1.1E-47 383.6 48.4 472 152-645 53-529 (546)
117 COG1125 OpuBA ABC-type proline 100.0 1.2E-46 2.7E-51 393.0 18.8 221 1083-1318 2-234 (309)
118 cd03288 ABCC_SUR2 The SUR doma 100.0 2.1E-45 4.5E-50 415.7 28.8 241 1079-1322 16-256 (257)
119 cd03252 ABCC_Hemolysin The ABC 100.0 6.6E-45 1.4E-49 407.5 28.4 235 428-665 1-235 (237)
120 COG1127 Ttg2A ABC-type transpo 100.0 3.1E-45 6.8E-50 382.1 21.4 228 426-664 7-245 (263)
121 COG1120 FepC ABC-type cobalami 100.0 3.5E-45 7.6E-50 398.0 20.8 214 427-654 2-229 (258)
122 KOG0065 Pleiotropic drug resis 100.0 5.3E-44 1.1E-48 446.0 33.5 208 443-653 128-351 (1391)
123 COG3839 MalK ABC-type sugar tr 100.0 7.5E-45 1.6E-49 410.4 23.1 221 427-663 3-233 (338)
124 cd03253 ABCC_ATM1_transporter 100.0 3.3E-44 7.2E-49 401.7 27.4 235 1083-1321 1-235 (236)
125 cd03251 ABCC_MsbA MsbA is an e 100.0 2.9E-44 6.4E-49 401.6 26.7 233 1083-1318 1-233 (234)
126 COG3638 ABC-type phosphate/pho 100.0 4.9E-45 1.1E-49 379.6 18.6 223 427-653 3-237 (258)
127 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.9E-44 8.4E-49 401.5 27.1 235 1083-1319 1-235 (238)
128 cd03244 ABCC_MRP_domain2 Domai 100.0 4.2E-44 9.1E-49 396.7 26.7 221 1081-1303 1-221 (221)
129 TIGR02314 ABC_MetN D-methionin 100.0 2.5E-44 5.3E-49 417.7 25.6 232 427-665 1-242 (343)
130 COG1136 SalX ABC-type antimicr 100.0 2.3E-44 5.1E-49 384.0 22.8 210 428-644 2-222 (226)
131 cd03288 ABCC_SUR2 The SUR doma 100.0 9.7E-44 2.1E-48 402.0 29.3 240 423-665 15-254 (257)
132 COG3842 PotA ABC-type spermidi 100.0 1.1E-44 2.3E-49 411.3 21.0 215 426-656 4-229 (352)
133 cd03254 ABCC_Glucan_exporter_l 100.0 6.3E-44 1.4E-48 397.6 26.7 227 1081-1309 1-227 (229)
134 COG2884 FtsE Predicted ATPase 100.0 1.3E-44 2.7E-49 362.7 18.7 208 427-647 1-220 (223)
135 COG1116 TauB ABC-type nitrate/ 100.0 2E-44 4.3E-49 383.3 21.2 202 427-643 3-212 (248)
136 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-44 5E-49 357.2 19.3 209 428-654 2-220 (231)
137 cd03253 ABCC_ATM1_transporter 100.0 1.3E-43 2.8E-48 396.9 28.0 233 428-664 1-233 (236)
138 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-43 2.4E-48 396.9 27.1 226 428-654 1-226 (234)
139 TIGR02314 ABC_MetN D-methionin 100.0 4.5E-44 9.7E-49 415.5 24.3 225 1083-1319 2-241 (343)
140 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-43 3.5E-48 394.2 27.9 227 426-654 1-227 (229)
141 COG1120 FepC ABC-type cobalami 100.0 5.4E-44 1.2E-48 388.7 22.5 214 1082-1309 2-229 (258)
142 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.9E-43 4E-48 396.0 27.4 227 428-654 1-227 (238)
143 KOG0062 ATPase component of AB 100.0 4E-43 8.7E-48 398.6 30.1 210 1081-1324 361-576 (582)
144 COG1122 CbiO ABC-type cobalt t 100.0 8.9E-44 1.9E-48 388.4 22.6 219 427-654 3-229 (235)
145 COG1124 DppF ABC-type dipeptid 100.0 8.3E-44 1.8E-48 374.1 21.4 227 1082-1320 3-242 (252)
146 COG3839 MalK ABC-type sugar tr 100.0 9.5E-44 2.1E-48 401.4 23.1 218 1082-1316 3-230 (338)
147 COG1124 DppF ABC-type dipeptid 100.0 1.8E-43 3.9E-48 371.5 22.8 227 427-664 3-242 (252)
148 COG1127 Ttg2A ABC-type transpo 100.0 1.9E-43 4.2E-48 368.7 22.0 224 1082-1319 8-245 (263)
149 cd03244 ABCC_MRP_domain2 Domai 100.0 5.2E-43 1.1E-47 388.0 27.0 220 426-647 1-220 (221)
150 cd03245 ABCC_bacteriocin_expor 100.0 6.2E-43 1.3E-47 387.1 26.7 220 1081-1301 1-220 (220)
151 PRK13631 cbiO cobalt transport 100.0 6.6E-43 1.4E-47 404.5 27.5 221 1082-1309 21-266 (320)
152 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-43 5.1E-48 385.1 22.1 215 1082-1309 3-229 (235)
153 PRK13631 cbiO cobalt transport 100.0 7.8E-43 1.7E-47 403.8 26.5 222 426-654 20-266 (320)
154 COG2884 FtsE Predicted ATPase 100.0 2.1E-43 4.5E-48 354.0 17.7 208 1083-1303 2-221 (223)
155 cd03248 ABCC_TAP TAP, the Tran 100.0 1E-42 2.3E-47 386.8 25.3 219 1079-1297 8-226 (226)
156 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1E-42 2.2E-47 376.4 24.2 210 427-654 4-228 (254)
157 cd03245 ABCC_bacteriocin_expor 100.0 2E-42 4.3E-47 383.1 27.1 220 426-646 1-220 (220)
158 COG3638 ABC-type phosphate/pho 100.0 6.3E-43 1.4E-47 363.9 21.2 222 1082-1320 3-245 (258)
159 cd03261 ABC_Org_Solvent_Resist 100.0 7.9E-43 1.7E-47 390.0 23.3 213 1083-1309 1-227 (235)
160 cd03260 ABC_PstB_phosphate_tra 100.0 7.6E-43 1.6E-47 388.2 22.2 212 1083-1306 1-227 (227)
161 cd03248 ABCC_TAP TAP, the Tran 100.0 1.9E-42 4.1E-47 384.7 25.1 220 423-642 7-226 (226)
162 COG1118 CysA ABC-type sulfate/ 100.0 4.4E-43 9.5E-48 377.1 18.0 219 427-655 2-229 (345)
163 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-42 2.4E-47 345.2 19.5 209 1083-1309 2-220 (231)
164 COG4178 ABC-type uncharacteriz 100.0 7.8E-39 1.7E-43 381.7 56.0 467 152-638 91-587 (604)
165 PRK13650 cbiO cobalt transport 100.0 2.2E-42 4.8E-47 395.0 24.5 217 1082-1309 4-230 (279)
166 PRK11650 ugpC glycerol-3-phosp 100.0 2.9E-42 6.4E-47 403.9 26.1 218 427-655 3-226 (356)
167 PRK14269 phosphate ABC transpo 100.0 2.6E-42 5.6E-47 388.3 24.5 218 1082-1309 2-231 (246)
168 PRK11432 fbpC ferric transport 100.0 2.9E-42 6.3E-47 402.7 25.8 225 427-663 6-236 (351)
169 COG1116 TauB ABC-type nitrate/ 100.0 1.5E-42 3.3E-47 369.0 21.2 198 1082-1298 3-212 (248)
170 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.5E-42 5.4E-47 373.4 23.2 210 1082-1309 4-228 (254)
171 cd03261 ABC_Org_Solvent_Resist 100.0 4.1E-42 8.9E-47 384.3 25.8 217 428-654 1-227 (235)
172 COG4178 ABC-type uncharacteriz 100.0 9.5E-39 2.1E-43 381.0 56.0 474 802-1293 88-587 (604)
173 COG1136 SalX ABC-type antimicr 100.0 4.2E-42 9.2E-47 366.7 24.1 207 1083-1299 2-222 (226)
174 COG4615 PvdE ABC-type sideroph 100.0 3.4E-39 7.4E-44 353.7 46.5 475 803-1301 51-530 (546)
175 PRK11153 metN DL-methionine tr 100.0 4.7E-42 1E-46 402.1 25.8 230 427-663 1-240 (343)
176 PRK14250 phosphate ABC transpo 100.0 6.4E-42 1.4E-46 383.6 25.7 224 1082-1320 3-232 (241)
177 COG3842 PotA ABC-type spermidi 100.0 9.5E-43 2.1E-47 395.4 19.0 221 1082-1319 5-236 (352)
178 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.7E-42 1.9E-46 374.0 25.5 204 1080-1303 4-207 (207)
179 TIGR03265 PhnT2 putative 2-ami 100.0 4.9E-42 1.1E-46 401.6 24.9 217 427-655 4-226 (353)
180 TIGR01186 proV glycine betaine 100.0 3.2E-42 7E-47 401.8 23.3 215 443-664 6-230 (363)
181 PRK11432 fbpC ferric transport 100.0 3.5E-42 7.7E-47 402.0 23.7 218 1082-1316 6-233 (351)
182 PRK11650 ugpC glycerol-3-phosp 100.0 7.7E-42 1.7E-46 400.4 26.0 219 1082-1316 3-231 (356)
183 PRK13650 cbiO cobalt transport 100.0 9E-42 1.9E-46 389.9 25.4 221 427-654 4-230 (279)
184 PRK11153 metN DL-methionine tr 100.0 6.2E-42 1.3E-46 401.0 24.4 223 1083-1317 2-238 (343)
185 PRK13643 cbiO cobalt transport 100.0 8.8E-42 1.9E-46 391.5 25.0 221 427-654 1-234 (288)
186 PRK14269 phosphate ABC transpo 100.0 1.2E-41 2.5E-46 382.9 25.5 218 427-654 2-231 (246)
187 PRK13637 cbiO cobalt transport 100.0 7.7E-42 1.7E-46 391.8 24.1 218 1083-1309 3-235 (287)
188 cd03260 ABC_PstB_phosphate_tra 100.0 6.1E-42 1.3E-46 380.9 22.4 213 428-650 1-226 (227)
189 PRK13647 cbiO cobalt transport 100.0 9.4E-42 2E-46 388.7 24.5 213 1082-1307 4-226 (274)
190 TIGR03265 PhnT2 putative 2-ami 100.0 7.5E-42 1.6E-46 400.0 23.8 217 1082-1315 4-230 (353)
191 PRK13637 cbiO cobalt transport 100.0 1.7E-41 3.7E-46 388.9 25.8 220 428-654 3-235 (287)
192 PRK09452 potA putrescine/sperm 100.0 1.6E-41 3.4E-46 398.9 25.9 219 426-656 13-237 (375)
193 cd03219 ABC_Mj1267_LivG_branch 100.0 9.5E-42 2E-46 381.9 23.0 222 428-654 1-233 (236)
194 TIGR01186 proV glycine betaine 100.0 7.7E-42 1.7E-46 398.6 23.1 207 1098-1316 6-226 (363)
195 PRK14273 phosphate ABC transpo 100.0 2E-41 4.3E-46 383.1 25.7 224 1082-1316 7-245 (254)
196 PRK14250 phosphate ABC transpo 100.0 2.7E-41 5.8E-46 378.6 26.3 216 427-654 3-222 (241)
197 PRK14242 phosphate transporter 100.0 1.4E-41 3E-46 384.4 24.1 218 1082-1309 6-238 (253)
198 PRK13643 cbiO cobalt transport 100.0 1.4E-41 3.1E-46 389.7 24.6 216 1083-1309 2-234 (288)
199 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-41 4.1E-46 381.7 25.0 222 1083-1315 2-238 (247)
200 cd03219 ABC_Mj1267_LivG_branch 100.0 7.6E-42 1.6E-46 382.7 21.5 217 1083-1309 1-233 (236)
201 PRK13646 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 390.6 23.1 220 1083-1309 3-236 (286)
202 TIGR03258 PhnT 2-aminoethylpho 100.0 1.7E-41 3.7E-46 397.3 25.1 219 425-655 3-230 (362)
203 PRK10744 pstB phosphate transp 100.0 2.4E-41 5.3E-46 383.4 25.6 220 1080-1309 11-245 (260)
204 PRK13642 cbiO cobalt transport 100.0 2.2E-41 4.8E-46 386.6 25.3 217 1082-1309 4-230 (277)
205 cd03256 ABC_PhnC_transporter A 100.0 1.4E-41 3.1E-46 381.8 23.3 212 1083-1307 1-233 (241)
206 PRK10851 sulfate/thiosulfate t 100.0 2.1E-41 4.6E-46 396.2 25.5 217 427-655 2-228 (353)
207 cd03296 ABC_CysA_sulfate_impor 100.0 1.4E-41 3E-46 380.8 22.9 211 1083-1309 3-227 (239)
208 cd03296 ABC_CysA_sulfate_impor 100.0 2E-41 4.4E-46 379.5 24.1 216 427-654 2-227 (239)
209 PRK13646 cbiO cobalt transport 100.0 2.3E-41 4.9E-46 388.1 24.8 220 428-654 3-236 (286)
210 PRK13635 cbiO cobalt transport 100.0 1.9E-41 4E-46 387.0 24.0 216 1082-1309 5-230 (279)
211 PRK09536 btuD corrinoid ABC tr 100.0 2E-41 4.3E-46 399.9 24.8 222 1082-1320 3-237 (402)
212 PRK14273 phosphate ABC transpo 100.0 3.4E-41 7.5E-46 381.2 25.7 220 426-655 6-240 (254)
213 cd03263 ABC_subfamily_A The AB 100.0 1.5E-41 3.2E-46 376.1 22.1 211 1083-1306 1-219 (220)
214 PRK10744 pstB phosphate transp 100.0 5.4E-41 1.2E-45 380.5 26.9 220 425-654 11-245 (260)
215 TIGR00972 3a0107s01c2 phosphat 100.0 3.6E-41 7.8E-46 379.4 25.2 218 427-654 1-233 (247)
216 PRK13647 cbiO cobalt transport 100.0 2.9E-41 6.3E-46 384.7 24.6 216 427-651 4-225 (274)
217 PRK10851 sulfate/thiosulfate t 100.0 2.2E-41 4.9E-46 396.0 24.4 217 1082-1315 2-232 (353)
218 PRK14242 phosphate transporter 100.0 3.4E-41 7.4E-46 381.2 24.9 218 427-654 6-238 (253)
219 TIGR02315 ABC_phnC phosphonate 100.0 2.5E-41 5.5E-46 380.2 23.4 212 1083-1307 2-234 (243)
220 PRK14267 phosphate ABC transpo 100.0 2.4E-41 5.2E-46 382.4 23.3 218 1082-1309 4-238 (253)
221 PRK13634 cbiO cobalt transport 100.0 3.1E-41 6.6E-46 387.4 24.5 220 428-654 3-236 (290)
222 PRK14235 phosphate transporter 100.0 3.5E-41 7.6E-46 383.2 24.6 220 1080-1309 17-252 (267)
223 cd03224 ABC_TM1139_LivF_branch 100.0 2.2E-41 4.7E-46 375.4 22.3 217 1083-1308 1-221 (222)
224 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.7E-41 3.6E-46 385.9 21.9 219 1084-1317 26-258 (269)
225 TIGR00960 3a0501s02 Type II (G 100.0 1.3E-41 2.9E-46 375.3 20.4 203 1083-1297 2-216 (216)
226 TIGR03258 PhnT 2-aminoethylpho 100.0 2.2E-41 4.8E-46 396.3 23.4 218 1081-1315 4-234 (362)
227 PRK15079 oligopeptide ABC tran 100.0 6.6E-41 1.4E-45 389.2 26.9 231 427-664 8-262 (331)
228 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.9E-40 4.2E-45 376.6 30.1 220 1079-1319 36-256 (282)
229 COG4175 ProV ABC-type proline/ 100.0 1.3E-41 2.8E-46 365.2 19.2 233 427-666 4-267 (386)
230 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.1E-41 9E-46 377.7 24.3 218 428-654 1-226 (242)
231 PRK09452 potA putrescine/sperm 100.0 4.4E-41 9.4E-46 395.2 25.5 217 1082-1315 14-240 (375)
232 PRK13651 cobalt transporter AT 100.0 4.1E-41 8.8E-46 387.3 24.7 221 427-654 2-255 (305)
233 cd03259 ABC_Carb_Solutes_like 100.0 1.4E-41 3.1E-46 374.1 20.1 203 1083-1301 1-213 (213)
234 PRK13636 cbiO cobalt transport 100.0 3.6E-41 7.8E-46 385.8 24.1 215 1082-1309 5-232 (283)
235 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.2E-41 6.9E-46 378.7 22.9 216 1083-1309 1-226 (242)
236 cd03258 ABC_MetN_methionine_tr 100.0 3.4E-41 7.4E-46 376.5 23.0 216 1083-1309 2-231 (233)
237 cd03256 ABC_PhnC_transporter A 100.0 3.9E-41 8.4E-46 378.3 23.4 221 428-652 1-233 (241)
238 PRK13634 cbiO cobalt transport 100.0 3E-41 6.4E-46 387.5 22.9 217 1083-1309 3-236 (290)
239 TIGR02315 ABC_phnC phosphonate 100.0 4.9E-41 1.1E-45 377.8 24.1 221 427-651 1-233 (243)
240 cd03250 ABCC_MRP_domain1 Domai 100.0 6.4E-41 1.4E-45 366.2 24.4 200 1083-1296 1-204 (204)
241 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.2E-41 9E-46 376.2 23.4 216 1083-1309 2-222 (236)
242 PRK13651 cobalt transporter AT 100.0 4.6E-41 1E-45 386.9 24.4 216 1083-1309 3-255 (305)
243 PRK14247 phosphate ABC transpo 100.0 4.1E-41 8.9E-46 379.8 23.5 226 1082-1318 3-243 (250)
244 cd03258 ABC_MetN_methionine_tr 100.0 3.9E-41 8.4E-46 376.0 23.0 220 427-653 1-230 (233)
245 PRK09536 btuD corrinoid ABC tr 100.0 7.4E-41 1.6E-45 395.0 26.4 214 427-654 3-229 (402)
246 cd03224 ABC_TM1139_LivF_branch 100.0 4.3E-41 9.3E-46 373.0 23.0 216 428-652 1-220 (222)
247 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.1E-40 2.3E-45 365.4 25.8 203 426-648 5-207 (207)
248 PRK15079 oligopeptide ABC tran 100.0 5.2E-41 1.1E-45 390.0 24.6 226 1082-1318 8-260 (331)
249 PRK11607 potG putrescine trans 100.0 7.7E-41 1.7E-45 393.9 26.4 219 425-655 17-241 (377)
250 PRK11000 maltose/maltodextrin 100.0 5.4E-41 1.2E-45 396.1 25.1 217 427-655 3-225 (369)
251 PRK14235 phosphate transporter 100.0 8.5E-41 1.8E-45 380.0 25.6 221 424-654 16-252 (267)
252 PRK11000 maltose/maltodextrin 100.0 5.2E-41 1.1E-45 396.3 24.2 217 1082-1315 3-229 (369)
253 TIGR03005 ectoine_ehuA ectoine 100.0 6.3E-41 1.4E-45 378.6 23.9 213 1083-1309 1-237 (252)
254 PRK13633 cobalt transporter AT 100.0 6.2E-41 1.3E-45 383.5 24.1 217 1082-1309 4-234 (280)
255 cd03263 ABC_subfamily_A The AB 100.0 4.5E-41 9.8E-46 372.2 22.2 215 428-651 1-219 (220)
256 PRK14268 phosphate ABC transpo 100.0 6.5E-41 1.4E-45 379.4 23.7 223 1082-1315 12-248 (258)
257 PRK13537 nodulation ABC transp 100.0 6.9E-41 1.5E-45 386.4 24.4 218 426-654 6-228 (306)
258 PRK14244 phosphate ABC transpo 100.0 3.5E-41 7.6E-46 380.5 21.4 222 1083-1315 6-243 (251)
259 TIGR00960 3a0501s02 Type II (G 100.0 3.7E-41 8E-46 371.7 21.0 208 427-642 1-216 (216)
260 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-40 2.5E-45 372.6 25.3 217 427-654 1-222 (236)
261 PRK11629 lolD lipoprotein tran 100.0 5.4E-41 1.2E-45 374.6 22.5 210 1082-1302 5-228 (233)
262 PRK14248 phosphate ABC transpo 100.0 8.3E-41 1.8E-45 380.8 24.5 218 1082-1309 21-253 (268)
263 PRK13636 cbiO cobalt transport 100.0 7.8E-41 1.7E-45 383.0 24.4 219 427-654 5-232 (283)
264 PRK14259 phosphate ABC transpo 100.0 9.6E-41 2.1E-45 379.7 25.0 219 1081-1309 12-254 (269)
265 cd03259 ABC_Carb_Solutes_like 100.0 4.1E-41 8.8E-46 370.5 21.2 207 428-646 1-213 (213)
266 cd03264 ABC_drug_resistance_li 100.0 5.6E-41 1.2E-45 368.8 22.1 203 1083-1301 1-211 (211)
267 PRK13632 cbiO cobalt transport 100.0 8.3E-41 1.8E-45 380.9 24.2 216 1082-1309 7-232 (271)
268 cd03266 ABC_NatA_sodium_export 100.0 6.3E-41 1.4E-45 370.5 22.6 207 1083-1301 2-218 (218)
269 PRK14274 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 378.0 25.0 218 1082-1309 12-244 (259)
270 PRK14237 phosphate transporter 100.0 1.1E-40 2.3E-45 379.2 24.9 219 1081-1309 19-252 (267)
271 PRK13652 cbiO cobalt transport 100.0 9.2E-41 2E-45 381.5 24.4 214 1083-1309 4-228 (277)
272 PRK10070 glycine betaine trans 100.0 1.1E-40 2.5E-45 393.2 25.8 231 427-664 4-265 (400)
273 PRK14251 phosphate ABC transpo 100.0 6.6E-41 1.4E-45 378.4 22.8 218 1082-1309 4-236 (251)
274 PRK14240 phosphate transporter 100.0 1.4E-40 3E-45 375.6 25.4 224 1081-1315 2-240 (250)
275 cd03266 ABC_NatA_sodium_export 100.0 6.7E-41 1.5E-45 370.3 22.4 212 427-646 1-218 (218)
276 PRK14248 phosphate ABC transpo 100.0 1.9E-40 4E-45 377.9 26.5 220 426-655 20-254 (268)
277 PRK14262 phosphate ABC transpo 100.0 8.5E-41 1.8E-45 377.3 23.4 227 1082-1319 3-244 (250)
278 PRK11831 putative ABC transpor 100.0 8.7E-41 1.9E-45 380.3 23.7 224 1082-1320 7-244 (269)
279 PRK14239 phosphate transporter 100.0 1.1E-40 2.4E-45 377.0 24.3 218 1082-1309 5-237 (252)
280 cd03218 ABC_YhbG The ABC trans 100.0 7.8E-41 1.7E-45 373.4 22.8 216 428-653 1-222 (232)
281 PRK14256 phosphate ABC transpo 100.0 1.3E-40 2.9E-45 376.0 24.8 220 1080-1309 2-237 (252)
282 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.4E-45 374.0 24.0 213 1083-1309 2-226 (240)
283 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-40 2.4E-45 374.0 24.0 218 427-654 1-226 (240)
284 cd03291 ABCC_CFTR1 The CFTR su 100.0 6.5E-40 1.4E-44 372.3 30.5 233 399-654 15-248 (282)
285 PRK10575 iron-hydroxamate tran 100.0 7.9E-41 1.7E-45 380.1 23.1 213 1082-1308 11-237 (265)
286 PRK11629 lolD lipoprotein tran 100.0 1.3E-40 2.7E-45 371.6 24.3 214 427-647 5-228 (233)
287 PRK13635 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 379.5 25.5 220 427-654 5-230 (279)
288 PRK13640 cbiO cobalt transport 100.0 1.4E-40 3E-45 380.8 25.1 217 1081-1309 4-233 (282)
289 cd03226 ABC_cobalt_CbiO_domain 100.0 4.5E-41 9.8E-46 367.7 20.1 199 1084-1298 1-205 (205)
290 PRK14268 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 376.5 25.1 222 426-655 11-244 (258)
291 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-41 4.8E-46 341.9 16.2 220 427-654 1-223 (245)
292 cd03265 ABC_DrrA DrrA is the A 100.0 8.5E-41 1.8E-45 369.7 22.5 209 1083-1306 1-219 (220)
293 PRK11264 putative amino-acid A 100.0 1.2E-40 2.7E-45 376.1 24.2 218 427-654 3-234 (250)
294 PRK14249 phosphate ABC transpo 100.0 1.7E-40 3.6E-45 374.9 25.3 218 1082-1309 4-236 (251)
295 PRK14236 phosphate transporter 100.0 1.5E-40 3.3E-45 379.0 25.1 220 1080-1309 23-257 (272)
296 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.7E-41 1.4E-45 381.0 22.1 217 429-655 26-252 (269)
297 PRK13642 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 379.9 24.8 221 427-654 4-230 (277)
298 PRK11308 dppF dipeptide transp 100.0 1.6E-40 3.4E-45 385.8 25.5 232 427-665 5-256 (327)
299 cd03218 ABC_YhbG The ABC trans 100.0 9.4E-41 2E-45 372.8 22.7 216 1083-1308 1-222 (232)
300 PRK14259 phosphate ABC transpo 100.0 2.5E-40 5.5E-45 376.2 26.6 219 426-654 12-254 (269)
301 PRK14245 phosphate ABC transpo 100.0 9.2E-41 2E-45 376.8 22.7 218 1082-1309 3-235 (250)
302 PRK13644 cbiO cobalt transport 100.0 1.4E-40 3.1E-45 379.0 24.5 214 1083-1309 2-225 (274)
303 PRK09473 oppD oligopeptide tra 100.0 1.3E-40 2.8E-45 387.0 24.6 235 427-665 12-263 (330)
304 PRK14267 phosphate ABC transpo 100.0 1.4E-40 3.1E-45 376.2 24.2 218 427-654 4-238 (253)
305 cd03268 ABC_BcrA_bacitracin_re 100.0 9.1E-41 2E-45 366.3 22.0 203 1083-1301 1-208 (208)
306 PRK11308 dppF dipeptide transp 100.0 1.5E-40 3.2E-45 386.0 24.9 227 1082-1319 5-254 (327)
307 PRK14249 phosphate ABC transpo 100.0 3E-40 6.4E-45 372.9 26.7 220 426-655 3-237 (251)
308 PRK14254 phosphate ABC transpo 100.0 2E-40 4.3E-45 379.4 25.5 219 1081-1309 38-270 (285)
309 PRK13537 nodulation ABC transp 100.0 9.7E-41 2.1E-45 385.2 23.0 214 1081-1309 6-228 (306)
310 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 5.1E-41 1.1E-45 371.2 19.8 204 1083-1297 1-218 (218)
311 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.1E-41 1.3E-45 370.6 20.4 208 428-642 1-218 (218)
312 TIGR03005 ectoine_ehuA ectoine 100.0 1.5E-40 3.3E-45 375.5 23.9 218 428-655 1-238 (252)
313 PRK11614 livF leucine/isoleuci 100.0 1.1E-40 2.3E-45 373.3 22.5 219 1082-1309 5-227 (237)
314 PRK11231 fecE iron-dicitrate t 100.0 1.2E-40 2.6E-45 376.9 23.0 220 1083-1319 3-235 (255)
315 PRK11264 putative amino-acid A 100.0 2.8E-40 6.1E-45 373.2 26.1 217 1083-1309 4-234 (250)
316 PRK14247 phosphate ABC transpo 100.0 2.6E-40 5.6E-45 373.3 25.7 218 427-654 3-235 (250)
317 TIGR02769 nickel_nikE nickel i 100.0 1.6E-40 3.4E-45 377.6 24.1 229 427-663 2-249 (265)
318 PRK10619 histidine/lysine/argi 100.0 1.7E-40 3.6E-45 376.1 24.1 216 1081-1309 4-242 (257)
319 PRK14238 phosphate transporter 100.0 2.8E-40 6.1E-45 376.3 26.1 222 426-655 23-257 (271)
320 PRK10070 glycine betaine trans 100.0 1.3E-40 2.7E-45 392.7 23.9 210 1099-1320 42-266 (400)
321 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-40 2.9E-45 389.6 24.0 206 443-655 37-256 (382)
322 PRK13644 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 377.6 25.0 219 427-654 1-225 (274)
323 PRK14240 phosphate transporter 100.0 2.7E-40 5.8E-45 373.2 25.5 219 426-654 2-235 (250)
324 PRK14274 phosphate ABC transpo 100.0 2.8E-40 6E-45 374.8 25.7 221 427-655 12-245 (259)
325 PRK11831 putative ABC transpor 100.0 1.8E-40 3.8E-45 377.8 24.1 227 427-664 7-243 (269)
326 TIGR03411 urea_trans_UrtD urea 100.0 1.5E-40 3.2E-45 373.6 23.2 212 1083-1308 3-231 (242)
327 cd03250 ABCC_MRP_domain1 Domai 100.0 2.3E-40 4.9E-45 361.9 24.0 200 428-641 1-204 (204)
328 PRK13648 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 377.3 24.6 216 1082-1309 7-232 (269)
329 PRK14260 phosphate ABC transpo 100.0 1.8E-40 3.8E-45 376.1 23.5 219 1081-1309 6-244 (259)
330 PRK11607 potG putrescine trans 100.0 1.8E-40 3.9E-45 390.8 24.4 218 1082-1316 19-246 (377)
331 cd03301 ABC_MalK_N The N-termi 100.0 1.1E-40 2.3E-45 367.3 21.1 203 1083-1301 1-213 (213)
332 PRK11614 livF leucine/isoleuci 100.0 2.4E-40 5.1E-45 370.6 24.1 218 427-653 5-226 (237)
333 COG1118 CysA ABC-type sulfate/ 100.0 6.6E-41 1.4E-45 360.3 18.7 217 1082-1315 2-233 (345)
334 PRK11022 dppD dipeptide transp 100.0 2.1E-40 4.6E-45 385.0 24.6 231 427-664 3-254 (326)
335 TIGR03410 urea_trans_UrtE urea 100.0 7.4E-41 1.6E-45 373.0 19.9 212 1083-1307 1-220 (230)
336 PRK14261 phosphate ABC transpo 100.0 2.2E-40 4.7E-45 374.5 24.0 228 1082-1320 6-248 (253)
337 cd03247 ABCC_cytochrome_bd The 100.0 1.4E-40 2.9E-45 355.2 21.1 178 1083-1301 1-178 (178)
338 cd03293 ABC_NrtD_SsuB_transpor 100.0 8E-41 1.7E-45 370.0 19.9 206 1083-1304 1-219 (220)
339 PRK14243 phosphate transporter 100.0 3E-40 6.4E-45 374.9 25.0 218 1082-1309 10-249 (264)
340 PRK10619 histidine/lysine/argi 100.0 2.4E-40 5.1E-45 374.9 24.1 219 426-654 4-242 (257)
341 PRK14238 phosphate transporter 100.0 2.7E-40 5.9E-45 376.4 24.7 218 1082-1309 24-256 (271)
342 PRK13632 cbiO cobalt transport 100.0 2.6E-40 5.7E-45 376.8 24.5 220 427-654 7-232 (271)
343 PRK13645 cbiO cobalt transport 100.0 2.6E-40 5.5E-45 380.5 24.6 223 425-654 4-241 (289)
344 PRK14256 phosphate ABC transpo 100.0 4.3E-40 9.4E-45 371.8 26.0 229 425-663 2-246 (252)
345 PRK13641 cbiO cobalt transport 100.0 3.1E-40 6.7E-45 378.8 25.2 221 427-654 2-235 (287)
346 PRK11022 dppD dipeptide transp 100.0 1.9E-40 4.2E-45 385.3 23.6 229 1082-1319 3-253 (326)
347 TIGR02211 LolD_lipo_ex lipopro 100.0 1.7E-40 3.6E-45 368.0 22.1 205 1083-1298 2-220 (221)
348 cd03265 ABC_DrrA DrrA is the A 100.0 1.7E-40 3.7E-45 367.3 22.1 213 428-651 1-219 (220)
349 PRK13652 cbiO cobalt transport 100.0 3.2E-40 6.9E-45 377.1 25.0 219 427-654 3-228 (277)
350 PRK09473 oppD oligopeptide tra 100.0 3E-40 6.6E-45 383.9 25.2 229 1082-1319 12-261 (330)
351 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-40 2.9E-45 389.7 22.3 209 1099-1319 38-264 (382)
352 PRK14239 phosphate transporter 100.0 3.6E-40 7.8E-45 372.8 25.1 219 427-655 5-238 (252)
353 TIGR02211 LolD_lipo_ex lipopro 100.0 2E-40 4.3E-45 367.3 22.6 209 428-643 2-220 (221)
354 PRK14245 phosphate ABC transpo 100.0 4.1E-40 8.8E-45 371.5 25.3 220 427-654 3-235 (250)
355 PRK11247 ssuB aliphatic sulfon 100.0 2.5E-40 5.5E-45 372.1 23.5 204 1082-1304 12-219 (257)
356 PRK13649 cbiO cobalt transport 100.0 4.1E-40 8.9E-45 377.5 25.5 217 1083-1309 3-235 (280)
357 PRK14266 phosphate ABC transpo 100.0 3.6E-40 7.8E-45 372.1 24.7 224 1082-1316 3-241 (250)
358 cd03264 ABC_drug_resistance_li 100.0 1.2E-40 2.6E-45 366.2 20.3 207 428-646 1-211 (211)
359 PRK14270 phosphate ABC transpo 100.0 3.4E-40 7.3E-45 372.5 24.3 218 1082-1309 4-236 (251)
360 PRK13648 cbiO cobalt transport 100.0 4.8E-40 1E-44 374.5 25.7 220 427-654 7-232 (269)
361 PRK14236 phosphate transporter 100.0 5E-40 1.1E-44 374.7 25.8 221 424-654 22-257 (272)
362 PRK13640 cbiO cobalt transport 100.0 4E-40 8.6E-45 377.0 25.0 221 426-654 4-233 (282)
363 PRK14237 phosphate transporter 100.0 6.1E-40 1.3E-44 373.0 26.4 220 425-654 18-252 (267)
364 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-40 9.1E-45 369.9 24.8 222 427-653 2-231 (242)
365 TIGR01288 nodI ATP-binding ABC 100.0 2.8E-40 6E-45 382.2 23.9 217 427-654 4-225 (303)
366 PRK13641 cbiO cobalt transport 100.0 3.1E-40 6.7E-45 378.9 24.0 218 1082-1309 2-235 (287)
367 PRK13645 cbiO cobalt transport 100.0 3E-40 6.5E-45 379.9 24.0 220 1080-1309 4-241 (289)
368 cd03226 ABC_cobalt_CbiO_domain 100.0 2E-40 4.2E-45 362.7 21.4 199 429-643 1-205 (205)
369 PRK13649 cbiO cobalt transport 100.0 3.6E-40 7.8E-45 378.0 24.5 220 428-654 3-235 (280)
370 PRK13548 hmuV hemin importer A 100.0 4.8E-40 1E-44 371.9 25.1 213 1083-1309 3-231 (258)
371 PRK13633 cobalt transporter AT 100.0 4.3E-40 9.4E-45 376.6 24.9 222 426-654 3-234 (280)
372 TIGR03410 urea_trans_UrtE urea 100.0 2.8E-40 6.2E-45 368.3 22.7 214 428-651 1-219 (230)
373 PRK11231 fecE iron-dicitrate t 100.0 4.1E-40 8.9E-45 372.5 24.3 217 427-653 2-227 (255)
374 PRK14243 phosphate transporter 100.0 7.3E-40 1.6E-44 371.7 26.4 219 427-655 10-250 (264)
375 PRK13638 cbiO cobalt transport 100.0 3E-40 6.5E-45 376.6 23.3 213 1083-1309 2-226 (271)
376 PRK10895 lipopolysaccharide AB 100.0 3.7E-40 8.1E-45 369.9 23.7 217 427-653 3-226 (241)
377 TIGR02673 FtsE cell division A 100.0 1.8E-40 3.9E-45 365.8 20.8 201 1083-1296 2-214 (214)
378 PRK14271 phosphate ABC transpo 100.0 6.2E-40 1.3E-44 373.9 25.8 218 1082-1309 21-252 (276)
379 cd03268 ABC_BcrA_bacitracin_re 100.0 2.5E-40 5.4E-45 362.8 21.8 203 428-646 1-208 (208)
380 TIGR02769 nickel_nikE nickel i 100.0 4.3E-40 9.4E-45 374.0 24.4 217 1083-1309 3-241 (265)
381 cd03300 ABC_PotA_N PotA is an 100.0 2.2E-40 4.9E-45 369.2 21.6 211 1083-1309 1-221 (232)
382 PRK11124 artP arginine transpo 100.0 3.1E-40 6.8E-45 370.8 22.8 213 1083-1309 3-231 (242)
383 PRK15112 antimicrobial peptide 100.0 5.1E-40 1.1E-44 373.6 24.8 229 1082-1321 4-252 (267)
384 PRK13536 nodulation factor exp 100.0 3.7E-40 8.1E-45 383.8 24.2 217 427-654 41-262 (340)
385 PRK13638 cbiO cobalt transport 100.0 4.6E-40 9.9E-45 375.1 24.2 218 427-654 1-226 (271)
386 PRK10575 iron-hydroxamate tran 100.0 4.4E-40 9.5E-45 374.0 23.9 213 427-653 11-237 (265)
387 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-40 7.9E-45 367.2 22.8 214 427-646 1-228 (228)
388 PRK14241 phosphate transporter 100.0 4.5E-40 9.7E-45 372.8 23.9 218 1082-1309 4-243 (258)
389 cd03235 ABC_Metallic_Cations A 100.0 1.6E-40 3.4E-45 365.8 19.6 198 1084-1301 1-213 (213)
390 cd03290 ABCC_SUR1_N The SUR do 100.0 6.3E-40 1.4E-44 362.3 24.5 210 1084-1296 2-218 (218)
391 PRK14270 phosphate ABC transpo 100.0 7.8E-40 1.7E-44 369.5 25.7 219 426-654 3-236 (251)
392 COG0410 LivF ABC-type branched 100.0 6E-40 1.3E-44 342.8 22.7 220 427-654 3-227 (237)
393 cd03292 ABC_FtsE_transporter F 100.0 2.7E-40 5.8E-45 364.5 21.3 202 1083-1297 1-214 (214)
394 PRK14244 phosphate ABC transpo 100.0 3.2E-40 6.9E-45 372.7 22.4 218 428-655 6-239 (251)
395 PRK14261 phosphate ABC transpo 100.0 6.8E-40 1.5E-44 370.4 25.1 218 427-654 6-238 (253)
396 cd03225 ABC_cobalt_CbiO_domain 100.0 2.3E-40 5.1E-45 364.0 20.7 201 1084-1296 1-211 (211)
397 PRK10253 iron-enterobactin tra 100.0 5.5E-40 1.2E-44 373.2 24.2 215 1081-1309 6-234 (265)
398 PRK10895 lipopolysaccharide AB 100.0 3.4E-40 7.3E-45 370.3 22.2 218 1082-1309 3-227 (241)
399 PRK14258 phosphate ABC transpo 100.0 5.1E-40 1.1E-44 372.6 23.7 219 1081-1309 6-246 (261)
400 TIGR00968 3a0106s01 sulfate AB 100.0 4.9E-40 1.1E-44 367.4 23.3 211 1083-1309 1-221 (237)
401 cd03247 ABCC_cytochrome_bd The 100.0 4.2E-40 9E-45 351.4 21.7 178 428-646 1-178 (178)
402 PRK14271 phosphate ABC transpo 100.0 8.5E-40 1.9E-44 372.8 25.6 220 427-654 21-252 (276)
403 PRK14251 phosphate ABC transpo 100.0 8.9E-40 1.9E-44 369.2 25.5 218 427-654 4-236 (251)
404 PRK14253 phosphate ABC transpo 100.0 5.5E-40 1.2E-44 370.4 23.7 218 1082-1309 3-234 (249)
405 cd03301 ABC_MalK_N The N-termi 100.0 3.5E-40 7.6E-45 363.2 21.5 207 428-646 1-213 (213)
406 TIGR01288 nodI ATP-binding ABC 100.0 4.5E-40 9.7E-45 380.5 23.4 213 1082-1309 4-225 (303)
407 PRK11300 livG leucine/isoleuci 100.0 7.5E-40 1.6E-44 370.8 24.8 223 427-654 5-244 (255)
408 PRK14252 phosphate ABC transpo 100.0 7.5E-40 1.6E-44 372.3 24.8 220 1080-1309 14-250 (265)
409 PRK14275 phosphate ABC transpo 100.0 5.8E-40 1.3E-44 376.1 24.0 225 1082-1317 39-278 (286)
410 TIGR03873 F420-0_ABC_ATP propo 100.0 5.1E-40 1.1E-44 371.9 23.2 212 1083-1308 2-226 (256)
411 PRK13548 hmuV hemin importer A 100.0 9.4E-40 2E-44 369.5 25.3 217 427-653 2-230 (258)
412 PRK10247 putative ABC transpor 100.0 5.1E-40 1.1E-44 364.3 22.7 213 427-649 7-223 (225)
413 PRK11247 ssuB aliphatic sulfon 100.0 7.3E-40 1.6E-44 368.4 24.2 204 427-649 12-219 (257)
414 cd03293 ABC_NrtD_SsuB_transpor 100.0 3.4E-40 7.3E-45 365.0 20.9 209 428-648 1-218 (220)
415 PRK14263 phosphate ABC transpo 100.0 8.7E-40 1.9E-44 369.9 24.7 218 1082-1309 8-246 (261)
416 PRK11124 artP arginine transpo 100.0 5.4E-40 1.2E-44 368.8 22.8 217 427-653 2-230 (242)
417 PRK13639 cbiO cobalt transport 100.0 7.2E-40 1.6E-44 373.8 24.1 219 427-654 1-227 (275)
418 PRK13639 cbiO cobalt transport 100.0 4.8E-40 1E-44 375.2 22.5 214 1083-1309 2-227 (275)
419 PRK14253 phosphate ABC transpo 100.0 1.1E-39 2.5E-44 367.9 25.3 218 427-654 3-234 (249)
420 PRK11300 livG leucine/isoleuci 100.0 6.1E-40 1.3E-44 371.6 23.0 221 1082-1309 5-244 (255)
421 PRK14272 phosphate ABC transpo 100.0 8.1E-40 1.8E-44 369.9 23.9 225 1082-1317 4-244 (252)
422 PRK14254 phosphate ABC transpo 100.0 1.7E-39 3.6E-44 371.8 26.6 220 425-654 37-270 (285)
423 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.5E-40 1.6E-44 359.9 22.8 201 1083-1301 1-211 (211)
424 PRK10584 putative ABC transpor 100.0 7.3E-40 1.6E-44 364.5 22.9 208 1082-1300 6-227 (228)
425 cd03225 ABC_cobalt_CbiO_domain 100.0 4.1E-40 8.9E-45 362.1 20.6 205 429-641 1-211 (211)
426 PRK10771 thiQ thiamine transpo 100.0 1.2E-39 2.5E-44 363.6 24.5 209 1083-1309 2-220 (232)
427 TIGR03522 GldA_ABC_ATP gliding 100.0 6E-40 1.3E-44 378.8 23.0 212 1083-1309 3-222 (301)
428 PRK14272 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 368.2 25.1 221 427-655 4-238 (252)
429 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-39 2.5E-44 363.3 24.3 212 1083-1301 2-228 (228)
430 PRK15112 antimicrobial peptide 100.0 1.2E-39 2.6E-44 370.6 24.7 232 427-665 4-251 (267)
431 TIGR03522 GldA_ABC_ATP gliding 100.0 8.1E-40 1.8E-44 377.7 23.6 217 427-654 2-222 (301)
432 PRK14262 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 368.2 24.2 218 427-654 3-235 (250)
433 PRK14252 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 369.5 25.7 221 424-654 13-250 (265)
434 PRK13536 nodulation factor exp 100.0 5.8E-40 1.3E-44 382.2 22.5 213 1082-1309 41-262 (340)
435 PRK11144 modC molybdate transp 100.0 1E-39 2.2E-44 383.7 24.8 213 427-656 1-221 (352)
436 PRK14260 phosphate ABC transpo 100.0 1.2E-39 2.6E-44 369.3 24.5 219 426-654 6-244 (259)
437 PRK14255 phosphate ABC transpo 100.0 8.3E-40 1.8E-44 369.7 23.0 223 1082-1315 5-242 (252)
438 PRK10247 putative ABC transpor 100.0 7.2E-40 1.6E-44 363.1 22.1 210 1082-1304 7-223 (225)
439 cd03290 ABCC_SUR1_N The SUR do 100.0 1.5E-39 3.2E-44 359.3 24.4 210 429-641 2-218 (218)
440 TIGR02673 FtsE cell division A 100.0 6.3E-40 1.4E-44 361.5 21.4 206 427-641 1-214 (214)
441 cd03292 ABC_FtsE_transporter F 100.0 6.3E-40 1.4E-44 361.6 21.3 206 428-642 1-214 (214)
442 PRK14275 phosphate ABC transpo 100.0 2.2E-39 4.7E-44 371.4 26.5 219 426-654 38-271 (286)
443 PRK15093 antimicrobial peptide 100.0 1.2E-39 2.5E-44 380.3 24.7 229 1082-1319 3-258 (330)
444 PRK10908 cell division protein 100.0 1E-39 2.2E-44 361.6 22.8 204 1083-1299 2-217 (222)
445 PRK10253 iron-enterobactin tra 100.0 1.6E-39 3.5E-44 369.3 24.9 218 426-653 6-233 (265)
446 cd03246 ABCC_Protease_Secretio 100.0 8.4E-40 1.8E-44 347.3 21.1 172 1083-1297 1-173 (173)
447 PRK11701 phnK phosphonate C-P 100.0 2.1E-39 4.5E-44 367.4 25.5 219 427-655 6-243 (258)
448 PRK15093 antimicrobial peptide 100.0 1.6E-39 3.4E-44 379.1 25.3 228 427-662 3-256 (330)
449 PRK14265 phosphate ABC transpo 100.0 2E-39 4.4E-44 369.6 25.6 218 1082-1309 20-259 (274)
450 PRK10908 cell division protein 100.0 1.3E-39 2.8E-44 360.8 23.3 209 427-644 1-217 (222)
451 PRK11701 phnK phosphonate C-P 100.0 2.8E-39 6.1E-44 366.3 26.5 226 1082-1318 6-250 (258)
452 PRK10584 putative ABC transpor 100.0 1.6E-39 3.5E-44 361.8 23.9 212 427-645 6-227 (228)
453 cd03299 ABC_ModC_like Archeal 100.0 1.5E-39 3.3E-44 362.9 23.8 210 1083-1309 1-220 (235)
454 cd03269 ABC_putative_ATPase Th 100.0 7.1E-40 1.5E-44 359.8 20.7 201 1083-1301 1-210 (210)
455 PRK14241 phosphate transporter 100.0 2E-39 4.3E-44 367.5 24.8 218 427-654 4-243 (258)
456 cd03246 ABCC_Protease_Secretio 100.0 1.3E-39 2.8E-44 345.8 21.7 172 428-642 1-173 (173)
457 TIGR03873 F420-0_ABC_ATP propo 100.0 1.2E-39 2.7E-44 368.8 22.8 221 428-653 2-226 (256)
458 PRK14264 phosphate ABC transpo 100.0 1.9E-39 4.2E-44 375.0 24.7 219 1081-1309 44-290 (305)
459 PRK14246 phosphate ABC transpo 100.0 2E-39 4.4E-44 366.1 24.3 227 1082-1319 10-251 (257)
460 PRK11144 modC molybdate transp 100.0 1.5E-39 3.2E-44 382.3 24.1 210 1083-1309 2-219 (352)
461 cd03262 ABC_HisP_GlnQ_permease 100.0 7.4E-40 1.6E-44 360.7 20.1 201 1083-1297 1-213 (213)
462 PRK14265 phosphate ABC transpo 100.0 4.6E-39 1E-43 366.6 27.2 219 426-654 19-259 (274)
463 cd03235 ABC_Metallic_Cations A 100.0 6.2E-40 1.3E-44 361.1 19.3 202 429-646 1-213 (213)
464 PRK13547 hmuV hemin importer A 100.0 1.7E-39 3.8E-44 368.4 23.4 222 427-653 1-244 (272)
465 PRK13547 hmuV hemin importer A 100.0 2.3E-39 4.9E-44 367.5 24.2 212 1083-1308 2-244 (272)
466 COG1137 YhbG ABC-type (unclass 100.0 1.6E-40 3.4E-45 335.3 12.7 223 426-654 3-229 (243)
467 cd03269 ABC_putative_ATPase Th 100.0 9.2E-40 2E-44 358.9 20.0 205 428-646 1-210 (210)
468 cd03262 ABC_HisP_GlnQ_permease 100.0 9.4E-40 2E-44 359.9 20.1 205 428-642 1-213 (213)
469 COG1123 ATPase components of v 100.0 2E-39 4.4E-44 382.1 23.7 234 426-664 279-530 (539)
470 cd03234 ABCG_White The White s 100.0 1E-39 2.2E-44 362.5 19.9 214 1083-1301 4-226 (226)
471 COG1131 CcmA ABC-type multidru 100.0 1.8E-39 3.8E-44 370.8 22.2 214 427-654 4-227 (293)
472 PRK14264 phosphate ABC transpo 100.0 4.6E-39 1E-43 371.8 25.9 222 426-654 44-290 (305)
473 TIGR01277 thiQ thiamine ABC tr 100.0 3E-39 6.6E-44 355.4 23.2 202 1083-1302 1-212 (213)
474 PRK10418 nikD nickel transport 100.0 3.3E-39 7.2E-44 364.6 24.1 225 1082-1321 4-243 (254)
475 PRK14258 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 364.1 25.9 220 426-655 6-247 (261)
476 COG0411 LivG ABC-type branched 100.0 8.9E-40 1.9E-44 344.2 17.9 221 427-654 4-240 (250)
477 TIGR01188 drrA daunorubicin re 100.0 1.3E-39 2.8E-44 376.5 20.9 200 1098-1309 6-214 (302)
478 TIGR01978 sufC FeS assembly AT 100.0 2E-39 4.3E-44 364.9 21.9 212 1083-1307 1-233 (243)
479 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-39 8.2E-44 354.3 23.5 201 428-646 1-211 (211)
480 TIGR00968 3a0106s01 sulfate AB 100.0 4.1E-39 8.8E-44 360.0 24.0 215 428-654 1-221 (237)
481 PRK14266 phosphate ABC transpo 100.0 5.6E-39 1.2E-43 362.4 25.4 218 427-654 3-235 (250)
482 PRK14255 phosphate ABC transpo 100.0 4.3E-39 9.4E-44 363.8 24.4 218 427-654 5-237 (252)
483 PRK09984 phosphonate/organopho 100.0 4.5E-39 9.7E-44 365.5 24.6 220 427-651 4-240 (262)
484 PRK14263 phosphate ABC transpo 100.0 5.7E-39 1.2E-43 363.2 25.3 218 427-654 8-246 (261)
485 cd03300 ABC_PotA_N PotA is an 100.0 3.8E-39 8.2E-44 359.3 23.3 215 428-654 1-221 (232)
486 TIGR01188 drrA daunorubicin re 100.0 2.1E-39 4.5E-44 374.8 21.7 204 443-654 6-214 (302)
487 PRK09984 phosphonate/organopho 100.0 4E-39 8.6E-44 365.9 23.4 222 1082-1321 4-251 (262)
488 PRK00349 uvrA excinuclease ABC 100.0 4.3E-38 9.3E-43 401.6 35.5 108 1210-1318 818-936 (943)
489 cd03234 ABCG_White The White s 100.0 2.5E-39 5.4E-44 359.4 21.1 214 428-646 4-226 (226)
490 PRK10419 nikE nickel transport 100.0 3.8E-39 8.3E-44 366.4 22.8 229 1083-1320 4-251 (268)
491 COG4598 HisP ABC-type histidin 100.0 1.1E-39 2.3E-44 322.1 15.8 228 427-664 6-252 (256)
492 COG1131 CcmA ABC-type multidru 100.0 2.9E-39 6.4E-44 369.0 21.7 214 1082-1309 4-227 (293)
493 COG0444 DppD ABC-type dipeptid 100.0 5.1E-39 1.1E-43 353.7 22.6 233 428-667 2-257 (316)
494 PRK10771 thiQ thiamine transpo 100.0 9.9E-39 2.1E-43 356.1 25.0 215 427-654 1-220 (232)
495 TIGR01978 sufC FeS assembly AT 100.0 4.2E-39 9.2E-44 362.2 22.2 214 428-651 1-232 (243)
496 PRK11248 tauB taurine transpor 100.0 4.3E-39 9.2E-44 363.0 21.8 203 1083-1304 2-216 (255)
497 PRK11248 tauB taurine transpor 100.0 6E-39 1.3E-43 361.8 22.9 207 427-648 1-215 (255)
498 PRK10419 nikE nickel transport 100.0 7.8E-39 1.7E-43 363.9 23.8 224 427-654 3-242 (268)
499 TIGR02142 modC_ABC molybdenum 100.0 6E-39 1.3E-43 377.9 23.4 213 1087-1316 4-228 (354)
500 COG0410 LivF ABC-type branched 100.0 7.6E-39 1.7E-43 334.6 21.3 220 1082-1309 3-227 (237)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5e-225 Score=2068.77 Aligned_cols=1216 Identities=51% Similarity=0.855 Sum_probs=1121.1
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
.+++..+++|..+.++.++++|++++++.++..|++..++++++|.+..... . ...+.+..+++++++++++.+++.|
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~lg~~~~~~~~ 89 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN-K-IASSEVSKVALYFVYLGVGVFISGF 89 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc-h-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999999999999999999999999998865332 1 2224667788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
++..||.+.++|+..++|.++++.++|++++|||.+ .+|++.+++++|++.|+++++++++.+++.+.+++++++++|+
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 7799999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
..|+|+++++.+.|++++....+.+.+.+...+.+.+++++.++++|++++||||.+|+.|+++.++|.+.++..++.+.
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+.+.+.++..+++.++.++++++.+|||+.++.++..++|.++++++++++....+++..+.+..+.++++|+.+|++++
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000689 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+..|++++....+......+|.|+|+||+|+||+||+.++|+|+||+|++|+++||||||||||||+++||.|||+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 99998876543344455678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCC
Q 000689 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~ 565 (1350)
+|++||.|+++++.+|+|++||+|+|||.||++||+|||+||+|+++.+++++|||++++++||..||+||+|.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 645 (1350)
+|||||||||||||||++||+||||||||||||+++|+.||++|+++++|||+|+|||||+++++||+|+||++|+|+|.
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~ 568 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQ 568 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCccccccc
Q 000689 646 GTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLD 725 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1350)
|+|+||++. .|.|.+|++.|+........+.+.+..+ ....+. .... ...+..+.. .. ..... ...+
T Consensus 569 G~h~ELi~~--~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~--~~~~s~-~~s~-~~~~~~~~~-~~-----~~~~~-~~~~ 635 (1228)
T KOG0055|consen 569 GTHDELIAL--GGIYSSLVRLQELEKAAEDEEEEESLKE--ERSRSL-KSSS-SSPSLSRGS-NR-----SNLLS-VKPE 635 (1228)
T ss_pred cCHHHHHhc--cchHHHHHHHHhhhhhhhccccccchhh--hhhhcc-cccc-ccccccCCc-cc-----ccccc-cccc
Confidence 999999998 5999999999976543221000000000 000000 0000 000000000 00 00000 0000
Q ss_pred CCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 000689 726 ATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYL 805 (1350)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1350)
.++..+.......+.++++++++++|+|+++++|++++++.|+..|++++.++.++..++.++.+.+......|+++
T Consensus 636 ---~e~~~~~~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~ 712 (1228)
T KOG0055|consen 636 ---GEDPEEPVSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALI 712 (1228)
T ss_pred ---ccccccccccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHH
Confidence 00000000111256789999999999999999999999999999999999999999999977766666666669999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000689 806 LIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQ 885 (1350)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~ 885 (1350)
|++++++.+++.++++++|.++|++++.++|.++|+++++++++|||.++|. |+|.+|+++|+.+++..+++.+..+++
T Consensus 713 f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~ 791 (1228)
T KOG0055|consen 713 FLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQ 791 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHH
Q 000689 886 NTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVG 965 (1350)
Q Consensus 886 ~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 965 (1350)
++..+++++++.|+++|+|++++++++|++++..+.+.+++.....+.++.+.++...+.|+++|++||++|++|+++.+
T Consensus 792 ~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~ 871 (1228)
T KOG0055|consen 792 NIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFME 871 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 966 LFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDF 1045 (1350)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1350)
.|.+.++.+.+...+.+.+.++.+++++++.|+++++.+|||.+|+.+|.+++..++.+++++.+.+..+.+...+.|++
T Consensus 872 ~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~ 951 (1228)
T KOG0055|consen 872 LYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDI 951 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHH
Q 000689 1046 IKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKS 1125 (1350)
Q Consensus 1046 ~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKS 1125 (1350)
.++..++.+++++++++++.+++.+.+ ..+++.+|+|+|+||+|+||+||+.+||+|+||+|++||+||||||||||||
T Consensus 952 ~ka~~Aa~~iF~i~dr~~~i~~~~~~~-~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKS 1030 (1228)
T KOG0055|consen 952 SKAKIAAGSIFEILDRKPTIDPDSTSG-GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKS 1030 (1228)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCC-CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHH
Confidence 999999999999999999877654222 2334688999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHh
Q 000689 1126 SVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFIS 1205 (1350)
Q Consensus 1126 TL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~ 1205 (1350)
|++.||.|||||.+|.|.|||+||+++++++||++||+|.|||.||++||||||.||.++++++||.+||+.||+|+||.
T Consensus 1031 TvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~ 1110 (1228)
T KOG0055|consen 1031 TVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFIS 1110 (1228)
T ss_pred HHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999966699999999999999999999
Q ss_pred cCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh
Q 000689 1206 SLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN 1285 (1350)
Q Consensus 1206 ~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~ 1285 (1350)
+||+||||.|||+|.+||||||||||||||++||||||||||||||||+++|+.||++|+++..|||+|+|||||+||++
T Consensus 1111 sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn 1190 (1228)
T KOG0055|consen 1111 SLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN 1190 (1228)
T ss_pred cCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhh
Q 000689 1286 AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1286 ~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
||.|+|+++|+|+|+|||++|+++ +|.|++|++.|..
T Consensus 1191 aD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1191 ADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQSS 1227 (1228)
T ss_pred CCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhccC
Confidence 999999999999999999999986 8999999998854
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.9e-176 Score=1757.33 Aligned_cols=1221 Identities=28% Similarity=0.481 Sum_probs=1023.5
Q ss_pred ccchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 85 TPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASS 164 (1350)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1350)
.++++..+|+|..+.++.+++++++++++.+++.|++|++++.++|.+... + .+..+++++++++++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~----~----~~~~~~~~~~~~~i~~~~~~ 114 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG----E----NVNDIIFSLVLIGIFQFILS 114 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----c----hHHHHHHHHHHHHHHHHHHH
Confidence 567899999999888888889999999999999999999999999976421 1 12223455666777788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 165 WAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF 244 (1350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1350)
+++.+++.++++++..++|.++|++++++|++|||+. ++|++++++++|++.+++.+...+..++..+++++++++++|
T Consensus 115 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~ 193 (1466)
T PTZ00265 115 FISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSL 193 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 000689 245 SAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLG 324 (1350)
Q Consensus 245 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~ 324 (1350)
+++|+|++++++++|+++++..++.+++++..++.++..++.++.+.|+++||++||+|+.|+.+.++|.+..+.+.+..
T Consensus 194 ~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~ 273 (1466)
T PTZ00265 194 FKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYI 273 (1466)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHH--------FTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKV 396 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g--------~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 396 (1350)
.+.....++..++..++.++++++++|+|++++.+| .+++|.+++++++.+.....+..+.+.+..++++.+
T Consensus 274 ~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~ 353 (1466)
T PTZ00265 274 LKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLE 353 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999889999888999999999999999886 578899988877777766677778888899999999
Q ss_pred HHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHH
Q 000689 397 AAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLI 476 (1350)
Q Consensus 397 s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll 476 (1350)
|++||+++++.++++++ ...+...+. .+.|+|+||+|+|+++++.++|+|+||+|++||++|||||||||||||+++|
T Consensus 354 a~~ri~~ii~~~~~~~~-~~~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL 431 (1466)
T PTZ00265 354 ATNSLYEIINRKPLVEN-NDDGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLI 431 (1466)
T ss_pred HHHHHHHHHcCCCCCCC-CCCCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999998776542 112222222 2479999999999865555799999999999999999999999999999999
Q ss_pred hcCCCCCCcEEEE-CCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCC--------------------------
Q 000689 477 ERFYDPTSGQVLL-DGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRP-------------------------- 529 (1350)
Q Consensus 477 ~~~~~~~~G~i~i-~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~-------------------------- 529 (1350)
+|+|+|++|+|++ ||+++++++.+++|++||||+|+|.||++||+|||.+|.+
T Consensus 432 ~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (1466)
T PTZ00265 432 ERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKR 511 (1466)
T ss_pred HHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccccc
Confidence 9999999999999 5799999999999999999999999999999999999742
Q ss_pred -------------------------------CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 530 -------------------------------DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 530 -------------------------------~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
+.++++++++++.+++++|+.+||+||||.+|++|.+|||||||||+||
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIA 591 (1466)
T PTZ00265 512 NSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIA 591 (1466)
T ss_pred ccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHH
Confidence 2456789999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCC----------------
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQG---------------- 640 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G---------------- 640 (1350)
|||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 592 RAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~ 671 (1466)
T PTZ00265 592 RAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPT 671 (1466)
T ss_pred HHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccc
Confidence 99999999999999999999999999999999986 489999999999999999999999986
Q ss_pred -------------------------------EEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhh--cccCCCCCCc
Q 000689 641 -------------------------------SVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNN--ARKSSARPSS 687 (1350)
Q Consensus 641 -------------------------------~i~~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~--~~~~~~~~~~ 687 (1350)
+|+|+|+|+||++. .+|.|+.|++.|.......... ......+...
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~-~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~ 750 (1466)
T PTZ00265 672 KDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKN-KNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSA 750 (1466)
T ss_pred ccccccccccccccccccccccccccccCCceeEeeCCHHHHHhc-cCCcHHHHHhhhcccccccccccccccccccccc
Confidence 59999999999973 2799999998775432111000 0000000000
Q ss_pred ccCCCCCcccccC-CCC-CCCCccccccCCccCcccccccCCCCchhh---hhh-hh-hhhhHHHHHHHHhcchhHHHHH
Q 000689 688 ARNSVSSPIIARN-SSY-GRSPYSRRLSDFSTSDFSLSLDATYPSYRH---EKL-AF-KEQASSFWRLAKMNSPEWVYAL 760 (1350)
Q Consensus 688 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 760 (1350)
............ ... ........ ..................... ++. .. ......+++++++.++.+..++
T Consensus 751 -~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1466)
T PTZ00265 751 -YKDSERGYDPDEMNGNSKHENESAS-NKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT 828 (1466)
T ss_pred -ccccccccccccccccccccccccc-cccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH
Confidence 000000000000 000 00000000 000000000000000000000 000 00 0011134445555556666688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 761 VGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKML 840 (1350)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 840 (1350)
++++++++.+++.|+++++++.+++.++... ........|++++++++++.+++.+++.+++.++++++..++|..+|
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf 906 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLF 906 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999998765321 12234556788888888899999999999999999999999999999
Q ss_pred HHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 841 AAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATV 920 (1350)
Q Consensus 841 ~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~ 920 (1350)
++++++|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|++++++++++|++.....
T Consensus 907 ~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~ 986 (1466)
T PTZ00265 907 ENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFA 986 (1466)
T ss_pred HHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987799999999999999999999999999999999999999999999999998887655544433322
Q ss_pred HHHHHHhhHh-H-H-------------HHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 921 LQKMFMKGFS-G-D-------------MEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIA 985 (1350)
Q Consensus 921 ~~~~~~~~~~-~-~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 985 (1350)
...+...... + . .++........++|++.|++|||+|+.|+++.++|.+..+...+...+...+.
T Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1466)
T PTZ00265 987 IRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVN 1066 (1466)
T ss_pred HHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111111100 0 0 12234566789999999999999999999999999999999988888888889
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Q 000689 986 GSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEI 1065 (1350)
Q Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~ 1065 (1350)
+..+++++++.++.+++++|+|++++..|.++++.++.++.++++...++..+....+++.++..+++|++++++.+++.
T Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~ 1146 (1466)
T PTZ00265 1067 SMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNI 1146 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcC
Confidence 99999999999999999999999999999999999988877776666677888899999999999999999999887644
Q ss_pred CCCCCCCCC--CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC------
Q 000689 1066 EPDDPDATP--VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP------ 1137 (1350)
Q Consensus 1066 ~~~~~~~~~--~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p------ 1137 (1350)
+..+..... .++...|.|+|+||+|+||++|+.+||+|+||+|+|||+|||||+||||||||+++|+|||+|
T Consensus 1147 ~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~ 1226 (1466)
T PTZ00265 1147 DVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHI 1226 (1466)
T ss_pred CCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccc
Confidence 221111111 112346889999999999987767899999999999999999999999999999999999999
Q ss_pred ------------------------------------------------CccEEEECCccCCCCCHHHhhcccEEEccCCc
Q 000689 1138 ------------------------------------------------SSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPC 1169 (1350)
Q Consensus 1138 ------------------------------------------------~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~ 1169 (1350)
++|+|+|||+||+++++++||++|+||||||+
T Consensus 1227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~ 1306 (1466)
T PTZ00265 1227 VFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPM 1306 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCc
Confidence 69999999999999999999999999999999
Q ss_pred cCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcC
Q 000689 1170 LFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEAT 1249 (1350)
Q Consensus 1170 LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaT 1249 (1350)
||+|||||||.||.++++|+|+++||+.|++++||.+||+||||.|||+|.+|||||||||||||||+|+|+||||||||
T Consensus 1307 LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaT 1386 (1466)
T PTZ00265 1307 LFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEAT 1386 (1466)
T ss_pred cccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeC----CeE-EEecChhHHhhcCCCchhHHHHHHh
Q 000689 1250 SALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDD----GKV-AELGSHSHLLKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1250 SaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~----GrI-vE~Gt~~eLl~~~~~g~y~~l~~~q 1322 (1350)
|+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|+|+|+||+++ .+|.|++||+.|
T Consensus 1387 SaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~-~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1387 SSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV-QDGVYKKYVKLA 1465 (1466)
T ss_pred cccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc-CCChHHHHHhhc
Confidence 9999999999999999874 69999999999999999999999999 995 499999999974 289999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-166 Score=1584.95 Aligned_cols=1094 Identities=24% Similarity=0.326 Sum_probs=867.7
Q ss_pred HHHHHHHHHHHHHH----HHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 172 MWTGERQSIKMRIK----YLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 172 ~~~~~~~~~~lR~~----~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1350)
.+...++..++|.. +|+|.++++..--... ++|+++|.+++|++++.++. .+++.+|.....++++.++-
T Consensus 263 ~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~-t~G~ivNlms~D~~ri~~~~-----~~~h~~w~~Plqi~~~l~lL 336 (1381)
T KOG0054|consen 263 FFVSFRVGMRLRSALISAIYRKALRLSNSARGET-TVGEIVNLMSVDAQRLSDAA-----CFLHLLWSAPLQIILALYLL 336 (1381)
T ss_pred HHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCC-CcchhhhhhhhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 34566677777765 6778888877765455 89999999999999999875 67888898888888888777
Q ss_pred HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHH
Q 000689 248 WQL----ALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRL 323 (1350)
Q Consensus 248 ~~l----~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~ 323 (1350)
|.+ +++.++++.+++.+..+++++.+++..+..+..+++...++|.++|||+||.|+||+.+.++.++..++..+.
T Consensus 337 y~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~ 416 (1381)
T KOG0054|consen 337 YGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKL 416 (1381)
T ss_pred HHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHH
Confidence 765 2344444455555667778888888999999999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 324 GYKSGFAKGMGLGATYFVVFCSYALLLWYGGYL-VRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIF 402 (1350)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-v~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 402 (1350)
-.|.....++...+..+...+.. .+.++.+. ...+.+++...++.+..+.....|+..++..+..+.++.+|.+|+.
T Consensus 417 lrk~~~~~~~~~~~~~~~p~lv~--~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~ 494 (1381)
T KOG0054|consen 417 LRKSAYLSALNSFLNFFSPVLVS--VVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLK 494 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777665554443333322 23344444 4567788888888877777778899999999999999999999999
Q ss_pred HHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000689 403 RIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP 482 (1350)
Q Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 482 (1350)
+++..++. ++......+..+.+..|+++|.+|+|+.....+.|+||||+|++|+.+||||+.|||||+|+++|+|+++.
T Consensus 495 ~fl~~~e~-~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~ 573 (1381)
T KOG0054|consen 495 EFLLSEEL-DPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPK 573 (1381)
T ss_pred HHhcCccc-CccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCccc
Confidence 99987543 22111101222233469999999999763344699999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcC
Q 000689 483 TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRE 562 (1350)
Q Consensus 483 ~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~ 562 (1350)
.+|++.++| .++||||+||+|+|||||||+||.| .+.+.++++.+.|.+..+++.||.|+.|.|||
T Consensus 574 ~sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGE 639 (1381)
T KOG0054|consen 574 LSGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGE 639 (1381)
T ss_pred ccceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecC
Confidence 999999999 4999999999999999999999987 67889999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHH-HHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000689 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKL-VQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~-i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 641 (1350)
+|.+|||||||||+||||+|+|+||++||||+||+|+++.++ +.++|+.+.++||+|+|||.++++++||+|++|+||+
T Consensus 640 rGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 640 RGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred CccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCe
Confidence 999999999999999999999999999999999999997655 5567877788999999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCccc
Q 000689 642 VSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFS 721 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 721 (1350)
|++.|+|+||++. .+.|.++......+.... ......+.. ...... . . ..... . . ...+.
T Consensus 720 I~~~Gty~el~~~--~~~~~~l~~~~~~~~~~~---~~~~~~~~~---~~~~~~--~-~-~~~~~---~---~-~~~~~- 779 (1381)
T KOG0054|consen 720 IVESGTYEELLKS--GGDFAELAHEEESEQEEE---ASEKDLESG---ESSRES--E-S-RSLES---L---S-SEEEK- 779 (1381)
T ss_pred EecccCHHHHHhc--chhHHHHhhccchhhccc---ccccccccc---ccccch--h-h-hhhhh---h---c-ccccc-
Confidence 9999999999987 677777733222111110 000000000 000000 0 0 00000 0 0 00000
Q ss_pred ccccCCCCchhh-hhhhhhhhhHHHHHHHHhcchhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHH
Q 000689 722 LSLDATYPSYRH-EKLAFKEQASSFWRLAKMNSPEWVY--ALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIRE 798 (1350)
Q Consensus 722 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1350)
..+....+.+. ..+....+..++..|+.|.+..+.+ ..+.+++.++...+.....+|+++|.+.-...... ...
T Consensus 780 -~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~--~~~ 856 (1381)
T KOG0054|consen 780 -SKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT--TVS 856 (1381)
T ss_pred -cccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc--CCC
Confidence 00000000000 0111133444455555554442222 22223333333444555566666665432111100 023
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHH
Q 000689 799 IAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGD 878 (1350)
Q Consensus 799 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~ 878 (1350)
...|.++|.+++++..++..++++.+...+.++++++|++|+++++|+||+|||. +|+|||+|||++|++.+|..+|.
T Consensus 857 ~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt--TP~GRILNRFSkD~~~vD~~Lp~ 934 (1381)
T KOG0054|consen 857 TSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT--TPTGRILNRFSKDIDTVDVLLPF 934 (1381)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC--CCccchhhhcccchHHHHHhhHH
Confidence 4578899999999999999999999999999999999999999999999999997 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHH----HHHHHHHHHHccHHHH
Q 000689 879 RIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHS----KATQLAGEAIGNVRTV 954 (1350)
Q Consensus 879 ~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~e~l~gi~tI 954 (1350)
.+..++++++.+++.++++.+..|+ ++++++|+.+++++++++|.++ +|++++..+ ...+|++|++.|+.||
T Consensus 935 ~~~~~~~~~~~~l~~~~vi~~~~P~---fli~~~pl~v~~~~~~~~Y~~t-sReLkRLesitRSPi~sh~~Etl~GlsTI 1010 (1381)
T KOG0054|consen 935 TLEFFLQSLLNVLGILVVISYVTPW---FLIAIIPLGVIYYFVQRYYLAT-SRELKRLESITRSPIYSHFSETLQGLSTI 1010 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhHH---HHHHHHHHHHHHHHHHHHHHHH-hHHHHHhhhcccchHHHhHHHHhcCccee
Confidence 9999999999999999999888885 5677888888888998888887 788888664 4568999999999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Q 000689 955 AAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANG 1034 (1350)
Q Consensus 955 ra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 1034 (1350)
|||+.+++|.+++..++|.+.+..+. ......|+++..-+....+.+...+...+...+..++|.+...+.+.+.....
T Consensus 1011 RAf~~~~rf~~~~~~~~D~~~~~~f~-~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~ 1089 (1381)
T KOG0054|consen 1011 RAFGKEERFIQENDELIDENSRAFFL-SISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGL 1089 (1381)
T ss_pred eeccccHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999998876443 33344455544333332222222222222223324556555555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCC--CCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCC
Q 000689 1035 AAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDA--TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGK 1112 (1350)
Q Consensus 1035 ~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge 1112 (1350)
+.-.+....+.+..+.+++|+.++.+.++| .|...+. .++.||..|+|+|+|++.||.++ .++|||||||+|+|||
T Consensus 1090 l~~~vR~~~elEn~m~SVERv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~e 1167 (1381)
T KOG0054|consen 1090 LQWLVRQSSELENNMVSVERVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGE 1167 (1381)
T ss_pred HHHHHHHHHHHHhcchhhhHHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCc
Confidence 666777788889999999999999998877 3332222 23446789999999999999754 3579999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHH
Q 000689 1113 TLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEII 1192 (1350)
Q Consensus 1113 ~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~ 1192 (1350)
|||||||||||||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||+|+||||..+ ++|+|||
T Consensus 1168 KVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e-~sD~~IW 1246 (1381)
T KOG0054|consen 1168 KVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDE-YSDDEIW 1246 (1381)
T ss_pred eEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccc-cCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 9999999
Q ss_pred HHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCce
Q 000689 1193 EAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKT 1272 (1350)
Q Consensus 1193 ~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~T 1272 (1350)
+|+++|+++++|.++|+|||++|.|+|.|||.||||++||||||||++|||+||||||++|++|+..||++||+.|++||
T Consensus 1247 ~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcT 1326 (1381)
T KOG0054|consen 1247 EALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCT 1326 (1381)
T ss_pred HHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHh
Q 000689 1273 TIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1273 vI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q 1322 (1350)
||+||||++||.|||||+|||+|+|+|+|+|++|+++ +++.|++++...
T Consensus 1327 VltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~-~~S~f~~~l~~~ 1375 (1381)
T KOG0054|consen 1327 VLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSD-KDSLFSSLLKEA 1375 (1381)
T ss_pred EEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhC-CcchHHHHHHHH
Confidence 9999999999999999999999999999999999998 589998776643
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-157 Score=1593.84 Aligned_cols=1156 Identities=20% Similarity=0.261 Sum_probs=849.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 000689 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISC--WMWTGERQSIKM 182 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 182 (1350)
++++++.++..++....|+++..+++.+..... . . .... +++.+++..++..+ +...+. ...++.++-..+
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~--~-~-~~~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~ir~~L 376 (1622)
T PLN03130 304 WLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEP--A-W-IGYI-YAFSIFVGVVLGVL--CEAQYFQNVMRVGFRLRSTL 376 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--c-h-HHHH-HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555666678888876543211 1 1 1111 11111111111111 111121 346777777788
Q ss_pred HHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000689 183 RIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIA 262 (1350)
Q Consensus 183 R~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 262 (1350)
+..+|+|+++++..++++. ++|+++|++++|++.+++++. .+..++..++.+++++++++..-...+++.++++.+.+
T Consensus 377 ~~~i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~ 454 (1622)
T PLN03130 377 VAAVFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMF 454 (1622)
T ss_pred HHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999887 999999999999999999873 34445555555444444333211111222222223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 263 VIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVV 342 (1350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1350)
.+..++.++.++..++..+..++..+.+.|.++||++||+|++|+.+.+++.+..++..+...+.....++...+...+.
T Consensus 455 ~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~ 534 (1622)
T PLN03130 455 PIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIP 534 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677788888888889999999999999999999999999999999998888777666666555544333322211
Q ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC
Q 000689 343 FCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD 422 (1350)
Q Consensus 343 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~ 422 (1350)
..+.++++|++++.+|.+++|.+++++.++.....|+..++..+..+.+++++++||.++++.++..+. . . ....
T Consensus 535 --~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~-~-~-~~~~ 609 (1622)
T PLN03130 535 --VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL-P-N-PPLE 609 (1622)
T ss_pred --HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc-c-C-Cccc
Confidence 134566789999999999999999988888788889999999999999999999999999986543211 0 1 0111
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-cEEEECCeeCCCCCHHH
Q 000689 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS-GQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~i~g~~~~~~~~~~ 501 (1350)
...+.|+++|++|+|++++++++|+|+||+|++|++++||||||||||||+++|+|+++|++ |+|.+.
T Consensus 610 ~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~----------- 678 (1622)
T PLN03130 610 PGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR----------- 678 (1622)
T ss_pred CCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc-----------
Confidence 12346999999999985444679999999999999999999999999999999999999999 999864
Q ss_pred HhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 502 LRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
.+|+||+|+||||++||||||+||.| .++++++++++.|++++++..||+|++|.+||+|.+|||||||||+||||+
T Consensus 679 --~~Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAl 755 (1622)
T PLN03130 679 --GTVAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAV 755 (1622)
T ss_pred --CeEEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHH
Confidence 47999999999999999999999987 578999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHH-HHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000689 582 LKNPAILLLDEATSALDSESEKLV-QEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y 660 (1350)
|++|+||||||||||||+++++.+ .++++...+++|+|+|||+++.+..||+|++|++|+|+++|+|+||+++ ++.|
T Consensus 756 y~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~--~~~~ 833 (1622)
T PLN03130 756 YSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN--GPLF 833 (1622)
T ss_pred hCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc--chhH
Confidence 999999999999999999998876 4667777789999999999999999999999999999999999999976 6888
Q ss_pred HHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhhhhh
Q 000689 661 AKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKE 740 (1350)
Q Consensus 661 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1350)
++++..+....+.... . ..... ... . ..+. ...... ....... .... .. ....... ..++...
T Consensus 834 ~~l~~~~~~~~~~~~~-~--~~~~~-~~~-~-~~~~--~~~~~~--~~~~~~~---~~~~-~~-~~~~~~~--~~e~~~~ 896 (1622)
T PLN03130 834 QKLMENAGKMEEYVEE-N--GEEED-DQT-S-SKPV--ANGNAN--NLKKDSS---SKKK-SK-EGKSVLI--KQEERET 896 (1622)
T ss_pred HHHHHhcccccccccc-c--ccccc-ccc-c-cccc--cccccc--ccccccc---cccc-cc-ccchhhh--hHHHHhc
Confidence 8887654321110000 0 00000 000 0 0000 000000 0000000 0000 00 0000000 0011122
Q ss_pred hhHHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 741 QASSFWRLAKMNSP--EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNT 818 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 818 (1350)
+...+..+.+|.+. .++.+.+.+++.++..++.....+|++.|.+...... .....|.++|++++++..++.+
T Consensus 897 g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~-----~~~~~~~~i~~~l~~~~~i~~~ 971 (1622)
T PLN03130 897 GVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKT-----HGPLFYNLIYALLSFGQVLVTL 971 (1622)
T ss_pred CccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-----CchhHHHHHHHHHHHHHHHHHH
Confidence 33334444444332 1122222222223333333444556665554321111 1124567778888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 819 LQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGF 898 (1350)
Q Consensus 819 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~ 898 (1350)
++.+++.+.+.+++.++|.++|++++++|++|||+ +++|+++|||++|++.++..++..+..++..++.+++.+++++
T Consensus 972 ~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~--~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~ 1049 (1622)
T PLN03130 972 LNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT--NPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIG 1049 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999996 8999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHH----HHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHH
Q 000689 899 VLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEA----AHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTP 974 (1350)
Q Consensus 899 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~ 974 (1350)
+++|.. +++++|+.++++.++.++.+. .++.++ ..++..+++.|+++|++|||+|+.++++.+.+.+..+..
T Consensus 1050 ~~~~~~---~~~~~pl~~~~~~~~~~~~~~-~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~ 1125 (1622)
T PLN03130 1050 IVSTIS---LWAIMPLLVLFYGAYLYYQST-AREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN 1125 (1622)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 877743 334455554444444444333 333333 345667899999999999999999999998888887776
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HHHHHcCC-CC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 975 LRRCFWKGQIAGSGYGVAQFCLYASYALGLWYS-SWLVKHGI-SD-----FSKTIRVFMVLMVSANGAAETLTLAPDFIK 1047 (1350)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1350)
.+..+.... ...+.++... +..++.++++ ...+..+. .. .+.+...+.........+..+......++.
T Consensus 1126 ~~~~~~~~~-~~~wl~~~l~---~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~ 1201 (1622)
T PLN03130 1126 IRFTLVNMS-SNRWLAIRLE---TLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAEN 1201 (1622)
T ss_pred HHHHHHHHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654433221 1222222111 1112222222 22233221 11 111111122222233344445555667788
Q ss_pred HHHHHHHHHHHhcccccCCCCCCCCC-CCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHH
Q 000689 1048 GGRAMRSVFDLLDRKTEIEPDDPDAT-PVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSS 1126 (1350)
Q Consensus 1048 ~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKST 1126 (1350)
.+.+++|+.++++.++|.+....... +..++..|.|+|+||+|+|+++ .++||+|+||+|+|||+|||||||||||||
T Consensus 1202 ~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKST 1280 (1622)
T PLN03130 1202 SLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSS 1280 (1622)
T ss_pred HHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHH
Confidence 99999999999987766432111111 1123457899999999999643 247999999999999999999999999999
Q ss_pred HHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhc
Q 000689 1127 VIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISS 1206 (1350)
Q Consensus 1127 L~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~ 1206 (1350)
|+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||+|++ +++|+|+|+|++.+++++||.+
T Consensus 1281 Ll~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~ 1359 (1622)
T PLN03130 1281 MLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRR 1359 (1622)
T ss_pred HHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999987 5899999999999999999999
Q ss_pred CCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhc
Q 000689 1207 LPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNA 1286 (1350)
Q Consensus 1207 lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~ 1286 (1350)
+|+||||+|||+|.+|||||||||||||||||+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++|
T Consensus 1360 lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~ 1439 (1622)
T PLN03130 1360 NSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDC 1439 (1622)
T ss_pred CccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhhc
Q 000689 1287 HVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1287 DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|||+||++|+|+|+|+|++|+++ ++|.|++|++.+...
T Consensus 1440 DrIlVLd~G~IvE~Gt~~eLl~~-~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1440 DRILVLDAGRVVEFDTPENLLSN-EGSAFSKMVQSTGAA 1477 (1622)
T ss_pred CEEEEEECCEEEEeCCHHHHHhC-CCCHHHHHHHHcChh
Confidence 99999999999999999999987 479999999875443
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-156 Score=1588.77 Aligned_cols=1154 Identities=20% Similarity=0.242 Sum_probs=852.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRI 184 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 184 (1350)
+++.++.++..++....|++++.+++.+.... .. . .. ..+++.+++..++..++.....+...+.+.++...++.
T Consensus 304 ~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~--~~-~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~ 378 (1495)
T PLN03232 304 WLGGIFKIGHDLSQFVGPVILSHLLQSMQEGD--PA-W-VG-YVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVA 378 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cc-c-hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555666566667888888664321 11 1 11 11111111111111121111112234677777788888
Q ss_pred HHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HH
Q 000689 185 KYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVP---LI 261 (1350)
Q Consensus 185 ~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~p---l~ 261 (1350)
.+|+|+++++..++++. ++|+++|++++|++.+++.+ ..+..++..++.+++++++ +.+.+++.+++.++ ++
T Consensus 379 ~i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~---l~~~lg~~~l~~~~v~~l~ 453 (1495)
T PLN03232 379 AIFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVL---LYQQLGVASLFGSLILFLL 453 (1495)
T ss_pred HHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHH
Confidence 99999999999999888 89999999999999999975 3333444333333333322 22234433332222 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 262 AVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFV 341 (1350)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1350)
+.+..++.++.++..++.++..++..+.+.|.++||++||+|++|+.+.+++++..++..+...+.....++...+....
T Consensus 454 ~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~ 533 (1495)
T PLN03232 454 IPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSI 533 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22355677888888889999999999999999999999999999999999999988887777777666555443322221
Q ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccC
Q 000689 342 VFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLEL 421 (1350)
Q Consensus 342 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~ 421 (1350)
...+.++++|++++.+|.+++|.+++++.++.....|+..++..+..+.+++++++||.++++.+++.+.. . ...
T Consensus 534 --~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~--~-~~~ 608 (1495)
T PLN03232 534 --PVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ--N-PPL 608 (1495)
T ss_pred --HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--c-CCc
Confidence 12333578899999999999999999988888888899999999999999999999999999876542211 1 111
Q ss_pred CCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH
Q 000689 422 DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 422 ~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~ 501 (1350)
....+.|+++|++|+|++++++++|+|+||+|++||+++||||||||||||+++|+|+|+|++|.+. +
T Consensus 609 ~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~ 676 (1495)
T PLN03232 609 QPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------V 676 (1495)
T ss_pred CCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------E
Confidence 1123469999999999854446799999999999999999999999999999999999999998763 3
Q ss_pred HhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 502 LRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+|++|+||+|+||||++||||||+||++ .++++++++++.|++++++..||+|++|.+||+|.+|||||||||+||||+
T Consensus 677 ~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAl 755 (1495)
T PLN03232 677 IRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAV 755 (1495)
T ss_pred ecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHH
Confidence 5678999999999999999999999986 688999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y 660 (1350)
|++|+||||||||||||+++++.+.+ +++...+++|+|+||||+++++.||+|++|++|+|+++|+|+||+++ ++.|
T Consensus 756 y~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~--~~~~ 833 (1495)
T PLN03232 756 YSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS--GSLF 833 (1495)
T ss_pred hcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc--chhH
Confidence 99999999999999999999987754 56766789999999999999999999999999999999999999986 7889
Q ss_pred HHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhhhhh
Q 000689 661 AKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKE 740 (1350)
Q Consensus 661 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1350)
+++++.+....+.... .+ ........ .+. ....... .... ... . .........+.++...
T Consensus 834 ~~l~~~~~~~~~~~~~-~~----~~~~~~~~--~~~----~~~~~~~--~~~~---~~~---~-~~~~~~~~~~~e~~~~ 893 (1495)
T PLN03232 834 KKLMENAGKMDATQEV-NT----NDENILKL--GPT----VTIDVSE--RNLG---STK---Q-GKRGRSVLVKQEERET 893 (1495)
T ss_pred HHHHHhcccccccccc-cc----cccccccc--ccc----ccccccc--cccc---ccc---c-cccchhhhhhHHHHhc
Confidence 8887654321110000 00 00000000 000 0000000 0000 000 0 0000000000111122
Q ss_pred hhHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 741 QASSFWRLAKMNSPE--WVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNT 818 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 818 (1350)
+...+..+++|.+.. ++.+.+.+++.++..++.....+|++.|.+.... . ......|+.+|++++++..++.+
T Consensus 894 g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~----~~~~~~~l~~y~~l~~~~~~~~~ 968 (1495)
T PLN03232 894 GIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP-K----SYSPGFYIVVYALLGFGQVAVTF 968 (1495)
T ss_pred CcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-C----CCCcchHHHHHHHHHHHHHHHHH
Confidence 333444455554432 1222222222222233333344555544331100 0 11134678889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 819 LQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGF 898 (1350)
Q Consensus 819 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~ 898 (1350)
++.+++.+.+.+++.++|++++++++++|++|||+ +++|+++||+++|++.++..++..+..++..++.+++.+++++
T Consensus 969 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~--~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~ 1046 (1495)
T PLN03232 969 TNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT--NPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIG 1046 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc--CCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999995 8999999999999999999999999999988888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000689 899 VLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 899 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
+.+|.. +++++|+.++++..+.++.+. ..+......+...+++.|++.|++|||+|+.++++.+.+.+..+...
T Consensus 1047 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~ 1123 (1495)
T PLN03232 1047 TVSTIS---LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNI 1123 (1495)
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 766533 333345554444444444332 22333344456678999999999999999999999988888877766
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-HHHHHH-cCCC----CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWY-SSWLVK-HGIS----DFSKTIR-VFMVLMVSANGAAETLTLAPDFIKG 1048 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~-~g~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1350)
+..+.... ...|.++... .+. ++.+++ +...+. .+.+ .+...+. ++.+......++..+.....+++.+
T Consensus 1124 ~~~~~~~~-~~~wl~~~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~ 1199 (1495)
T PLN03232 1124 RFTLANTS-SNRWLTIRLE--TLG-GVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENS 1199 (1495)
T ss_pred HHHHHHHH-HHHHHHHHHH--HHH-HHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55443221 1222222211 111 222233 333332 2322 1122222 2222223334556666777888899
Q ss_pred HHHHHHHHHHhcccccCCCCCCCCC-CCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHH
Q 000689 1049 GRAMRSVFDLLDRKTEIEPDDPDAT-PVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSV 1127 (1350)
Q Consensus 1049 ~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL 1127 (1350)
..+++|+.++++.++|.+....... +..++..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||||
T Consensus 1200 ~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL 1278 (1495)
T PLN03232 1200 LNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSM 1278 (1495)
T ss_pred HHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHH
Confidence 9999999999987766432111111 1113456899999999999643 2479999999999999999999999999999
Q ss_pred HHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcC
Q 000689 1128 IALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSL 1207 (1350)
Q Consensus 1128 ~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~l 1207 (1350)
+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+|||||||++++ +++|+|+|+|++.++++++|+++
T Consensus 1279 ~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~l 1357 (1495)
T PLN03232 1279 LNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRN 1357 (1495)
T ss_pred HHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999986 69999999999999999999999
Q ss_pred CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcC
Q 000689 1208 PDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAH 1287 (1350)
Q Consensus 1208 p~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~D 1287 (1350)
|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||
T Consensus 1358 p~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~D 1437 (1495)
T PLN03232 1358 PFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCD 1437 (1495)
T ss_pred cCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhhc
Q 000689 1288 VIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1288 rI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
||+||++|+|+|+|+|+||+++ ++|.|++|++.+...
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~~-~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLSR-DTSAFFRMVHSTGPA 1474 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhChh
Confidence 9999999999999999999987 467999999976543
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-151 Score=1541.56 Aligned_cols=1189 Identities=19% Similarity=0.217 Sum_probs=870.4
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++.+++.++ + .++.+++..++..++....|+++..+++.+..... . .... ..++..++++.++..++....
T Consensus 307 l~~~l~~~~~---~-~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~--~~~g-~~~~~~~~~~~~~~~~~~~~~ 378 (1522)
T TIGR00957 307 LFKVLYKTFG---P-YFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMA-P--DWQG-YFYTGLLFVCACLQTLILHQY 378 (1522)
T ss_pred HHHHHHHHHh---H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-c--cchH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4445555433 2 22333444444444555556677888886543211 1 1111 111112222222222332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1350)
.+...+.+.++...++..+|+|+++++..++++. ++|+++|++++|++++.+.. ..+..++..++.+++++++++..-
T Consensus 379 ~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~ 456 (1522)
T TIGR00957 379 FHICFVSGMRIKTAVMGAVYRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNL 456 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2335567888888999999999999999999888 99999999999999998854 233333333333333333322211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000689 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
...+++.++++++++.+..++.+++++..++.++..++..+.+.|.++||++||+|++|+.+.+++++..++..+...+.
T Consensus 457 g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~ 536 (1522)
T TIGR00957 457 GPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKS 536 (1522)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233444555566666677788888888999999999999999999999999999999999999998888877766665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRH--HFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~--g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
.....+........ ...+.++.++.+.+.. +.++.+.+++++.++.....|+..++..+..+.+++++.+||.+++
T Consensus 537 ~~~~~~~~~~~~~~--~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l 614 (1522)
T TIGR00957 537 AYLHAVGTFTWVCT--PFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFL 614 (1522)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544332221111 1122233455666653 5688888888776666677799999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCC-CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000689 406 DHKPSIDRNSESGLELD-SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~-~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
+.+++.+. ........ ...+.|+++|++|+|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++
T Consensus 615 ~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~ 692 (1522)
T TIGR00957 615 SHEELEPD-SIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVE 692 (1522)
T ss_pred cCcccccc-cccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCC
Confidence 86543211 00001111 112379999999999742 3469999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCC
Q 000689 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g 564 (1350)
|+|.++| +|+||+|+||+|++||+|||.+|.+ .+++++.++++.|++.+++..+|+|++|.+|++|
T Consensus 693 G~i~~~g-------------~i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 693 GHVHMKG-------------SVAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred cEEEECC-------------EEEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 9999998 5999999999999999999999976 4667788888999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHH---hcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000689 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDR---FMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 641 (1350)
.+|||||||||+||||++++|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999999998853 456899999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcc-cCCCCCCcccCCCCC---ccc-ccCCCC----CCCCccccc
Q 000689 642 VSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNAR-KSSARPSSARNSVSS---PII-ARNSSY----GRSPYSRRL 712 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~-~~~~~~----~~~~~~~~~ 712 (1350)
|++.|+|++++++ ++.|.+++..+....+....... ..............+ ... ...... .........
T Consensus 839 i~~~g~~~~l~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1522)
T TIGR00957 839 ISEMGSYQELLQR--DGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGD 916 (1522)
T ss_pred EEeeCCHHHHHhc--chhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccc
Confidence 9999999999976 67888887644321111000000 000000000000000 000 000000 000000000
Q ss_pred cC-CccCcccccc-cCCCC-chhhhhhhhhhhhHHHHHHHHhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 713 SD-FSTSDFSLSL-DATYP-SYRHEKLAFKEQASSFWRLAKMNSP-EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYY 788 (1350)
Q Consensus 713 ~~-~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1350)
.. .......... ..... ......+....+...+..++.|.+. ++...++.+++.++..++..+..+|++.|.+...
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~ 996 (1522)
T TIGR00957 917 QSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPM 996 (1522)
T ss_pred ccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 00 0000000000 00000 0000011111222233333333322 2222222233333334444455666666654211
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhh
Q 000689 789 NPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALD 868 (1350)
Q Consensus 789 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D 868 (1350)
.... ......|..+|++++++..++.++..+++.+++.+++.++|++++++++++|++|||+ +++|+++|||++|
T Consensus 997 ~~~~---~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnR~s~D 1071 (1522)
T TIGR00957 997 VNGT---QNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER--TPSGNLVNRFSKE 1071 (1522)
T ss_pred ccCC---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc--CChHHHHHHHHHH
Confidence 0000 0112345667888888888888888999999999999999999999999999999996 8999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HhHHHHHHHHHHHHHHH
Q 000689 869 ANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAG 945 (1350)
Q Consensus 869 ~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 945 (1350)
++.++..++..+..++..++.+++.++++++.+|++++++++++ +++.++++++.+. ..+......+...+++.
T Consensus 1072 i~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~ 1148 (1522)
T TIGR00957 1072 LDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLG---LLYFFVQRFYVASSRQLKRLESVSRSPVYSHFN 1148 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999998888888887655444433 3334444444433 22333344566779999
Q ss_pred HHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCHHHHHHH
Q 000689 946 EAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLV-KHGISDFSKTIRV 1024 (1350)
Q Consensus 946 e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~~~~~~ 1024 (1350)
|++.|++|||+|++++++.+++.+..+...+..+.............+++ ...+.++.+...+ ..|.++.|.+..+
T Consensus 1149 E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~g~l~~~ 1225 (1522)
T TIGR00957 1149 ETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECV---GNCIVLFAALFAVISRHSLSAGLVGLS 1225 (1522)
T ss_pred HHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 99999999999999999999999999888776554333322221122222 1223333344343 3577888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC-CCCCCCCCcEEEEEEEEECCCCCCCCcccc
Q 000689 1025 FMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT-PVPDRLRGEVELKHVDFSYPSRPDIPIFRD 1103 (1350)
Q Consensus 1025 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~ 1103 (1350)
+.+......++..+.....+++.++.+++|+.++++.+++.+....... +..++..|.|+|+||+|+|+++. .+||+|
T Consensus 1226 l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~ 1304 (1522)
T TIGR00957 1226 VSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRH 1304 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccc
Confidence 7777777888888899999999999999999999987665431111111 11234578999999999997643 379999
Q ss_pred eeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCC
Q 000689 1104 LSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGH 1183 (1350)
Q Consensus 1104 vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~ 1183 (1350)
+||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||||||++..
T Consensus 1305 is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~ 1384 (1522)
T TIGR00957 1305 INVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS 1384 (1522)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHH
Q 000689 1184 ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1184 ~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
+++|+|+|+|++.|+++++|.++|+||||+|||+|.+||||||||+||||||||+|+|||||||||+||++||+.||++
T Consensus 1385 -~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~ 1463 (1522)
T TIGR00957 1385 -QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST 1463 (1522)
T ss_pred -CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1264 LDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|++.+++||||+||||++|+++||||+||++|+|+|+|+|+||+++ +|.|++|++.
T Consensus 1464 l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~--~~~f~~l~~~ 1519 (1522)
T TIGR00957 1464 IRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ--RGIFYSMAKD 1519 (1522)
T ss_pred HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC--CCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987 7999999986
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.4e-145 Score=1471.04 Aligned_cols=1169 Identities=18% Similarity=0.209 Sum_probs=858.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRI 184 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 184 (1350)
++++++.++..++....|++++.+++.+... +. . ......+++.+++..++..++.....+...+.+.++-..++.
T Consensus 247 ~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~--~~-~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~ 322 (1560)
T PTZ00243 247 WWQIPFKLLSDVCTLTLPVLLKYFVKFLDAD--NA-T-WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNA 322 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--Cc-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555556666677777765321 11 1 111111111222222233333333344555677777777888
Q ss_pred HHHHHHHhCChhhHh--ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000689 185 KYLEAALNQDVQYFD--TEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIA 262 (1350)
Q Consensus 185 ~~~~~ll~~~~~~fd--~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 262 (1350)
.+|+|+++++...+. +. ++|+++|++++|++.+.+++. .+..++...+.++++++++..+..+.+++.++++++.+
T Consensus 323 ~if~K~l~ls~~~~~~~~~-~~G~i~nl~s~Dv~~i~~~~~-~~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~ 400 (1560)
T PTZ00243 323 LIFEKCFTISSKSLAQPDM-NTGRIINMMSTDVERINSFMQ-YCMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTL 400 (1560)
T ss_pred HHHHHHHhCChhhhCCCCC-CHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 899999999988775 33 789999999999999999873 34556666666666666665554456777777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 263 VIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVV 342 (1350)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (1350)
.+..++.++..+..++..+..++..+.+.|.++|||+||.|+||+.+.+++++..++..+...+......+...+.....
T Consensus 401 pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p 480 (1560)
T PTZ00243 401 PLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATP 480 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888999999999999999999999999999999999999999888887776666666555443333322
Q ss_pred HHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC----CCCC--
Q 000689 343 FCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSID----RNSE-- 416 (1350)
Q Consensus 343 ~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~----~~~~-- 416 (1350)
.+. .++.++++.+.++.++++.+++++.++.....|+..++..+..+.++.+|++||.++++.++... +...
T Consensus 481 ~l~--~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~ 558 (1560)
T PTZ00243 481 TLM--IAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYW 558 (1560)
T ss_pred HHH--HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhc
Confidence 222 23356778888899999999999888888888999999999999999999999999997643100 0000
Q ss_pred -------C--C---------------cc---------------------------CCCCcceEEEEEEEEECCCC-----
Q 000689 417 -------S--G---------------LE---------------------------LDSVSGLIELKHVDFSYPSR----- 440 (1350)
Q Consensus 417 -------~--~---------------~~---------------------------~~~~~g~i~~~~v~f~y~~~----- 440 (1350)
. . .. .....+.+.++|++|+++..
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1560)
T PTZ00243 559 REQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHI 638 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccccccccccccccccccc
Confidence 0 0 00 00011346778887765310
Q ss_pred --------------------------------CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 441 --------------------------------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 441 --------------------------------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
.++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~ 718 (1560)
T PTZ00243 639 VEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVW 718 (1560)
T ss_pred ccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE
Confidence 124589999999999999999999999999999999999999999998
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
++ ++||||+|+||+|++||+|||.++.+ .+.+++.++.+.+++++++..+|+|++|.+|++|.+||
T Consensus 719 ~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LS 784 (1560)
T PTZ00243 719 AE-------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLS 784 (1560)
T ss_pred EC-------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCC
Confidence 74 37999999999999999999999875 35566778888899999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
|||||||+|||||+.+|+|||||||||+||+++++.+.+ ++....+|+|+|+|||+++.+..||+|++|++|++++.|+
T Consensus 785 GGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~ 864 (1560)
T PTZ00243 785 GGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGS 864 (1560)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999998877765 4444557899999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCC
Q 000689 648 HDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAT 727 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (1350)
++++++. +.|.++........+... .. ...+............ .......... ...........+..
T Consensus 865 ~~~l~~~---~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~ 931 (1560)
T PTZ00243 865 SADFMRT---SLYATLAAELKENKDSKE--GD-ADAEVAEVDAAPGGAV-----DHEPPVAKQE--GNAEGGDGAALDAA 931 (1560)
T ss_pred HHHHHhC---hHHHHHHHhhcccccccc--cc-cccccccccccccccc-----cccccccccc--cccccccccccccc
Confidence 9999864 567766543221110000 00 0000000000000000 0000000000 00000000000000
Q ss_pred CCchhhhhhhhhhhhHHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 000689 728 YPSYRHEKLAFKEQASSFWRLAKMNSPE--WVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYL 805 (1350)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1350)
..... ..+....+..+|+.++.|.+.. +.++++.++..++..++.....+|++.|...... .....|+.+
T Consensus 932 ~~~l~-~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~-------~~~~~~l~~ 1003 (1560)
T PTZ00243 932 AGRLM-TREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK-------LSAATYLYV 1003 (1560)
T ss_pred cchhh-hHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC-------CCcccHHHH
Confidence 00000 0001111223344444443321 1111111112222223333344555544332111 112345666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000689 806 LIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQ 885 (1350)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~ 885 (1350)
|+++.++..++.+++.++....+.+.+.++|+.+|++++++|+.|||+ +++|+++|||++|++.++..++..+..++.
T Consensus 1004 y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~--~~~G~ilnR~s~Di~~id~~l~~~l~~~~~ 1081 (1560)
T PTZ00243 1004 YLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT--TPLGRILNRFSRDIDILDNTLPMSYLYLLQ 1081 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC--CCccHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 777777777777777777777888889999999999999999999996 899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHH
Q 000689 886 NTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKG---FSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELM 962 (1350)
Q Consensus 886 ~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~ 962 (1350)
.++.+++.++++++.+|.+. ++++|+.+++..+..++.+. ..+......++..+++.|++.|++|||+|+.++.
T Consensus 1082 ~~~~~i~~li~~~~~~p~~~---~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~ 1158 (1560)
T PTZ00243 1082 CLFSICSSILVTSASQPFVL---VALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHL 1158 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHH
Confidence 99999999988888888433 34445544444444444333 2223334556678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH--HHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 963 IVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWL--VKHGISDFSKTIRVFMVLMVSANGAAETLT 1040 (1350)
Q Consensus 963 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1350)
+.++|.+.++...+..+.............+++..+...++.+++... ...+..+++.+..++.+......++..+..
T Consensus 1159 ~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~ 1238 (1560)
T PTZ00243 1159 VMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVR 1238 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988776665433333322223333333333333333332 233446677665555555666777888888
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCC-CC----------------C--------CCCCC---CCCCCCCcEEEEEEEEEC
Q 000689 1041 LAPDFIKGGRAMRSVFDLLDRKTEIE-PD----------------D--------PDATP---VPDRLRGEVELKHVDFSY 1092 (1350)
Q Consensus 1041 ~~~~~~~~~~a~~~v~~~~~~~~~~~-~~----------------~--------~~~~~---~~~~~~g~I~f~nVsf~Y 1092 (1350)
...+++.++.+++|+.++++..++.+ +. + +...+ +.++..|.|+|+||+|+|
T Consensus 1239 ~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y 1318 (1560)
T PTZ00243 1239 QVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRY 1318 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEe
Confidence 88999999999999999986433211 00 0 00000 111245889999999999
Q ss_pred CCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCc
Q 000689 1093 PSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFA 1172 (1350)
Q Consensus 1093 ~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~ 1172 (1350)
++. .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+
T Consensus 1319 ~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~ 1397 (1560)
T PTZ00243 1319 REG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFD 1397 (1560)
T ss_pred CCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCcccc
Confidence 754 3469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC-CCEEEEeCcCCC
Q 000689 1173 STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK-AEIMLLDEATSA 1251 (1350)
Q Consensus 1173 gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~-p~ILlLDEaTSa 1251 (1350)
||||+||+++. +++|+|+|+|++.++++++|.++|+||||.|||+|.+||||||||||||||||++ |+|||||||||+
T Consensus 1398 gTIreNIdp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSa 1476 (1560)
T PTZ00243 1398 GTVRQNVDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATAN 1476 (1560)
T ss_pred ccHHHHhCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCcc
Confidence 99999999874 6899999999999999999999999999999999999999999999999999996 899999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhh
Q 000689 1252 LDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1252 LD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
||++||+.||++|++.+++||+|+||||++|+++||+|+||++|+|+|+|+|+||+++ ++|.|++|++.+..
T Consensus 1477 LD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1477 IDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEALGR 1548 (1560)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999999999999999999999986 48999999987643
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.7e-143 Score=1452.88 Aligned_cols=1170 Identities=19% Similarity=0.240 Sum_probs=841.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 112 FVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAAL 191 (1350)
Q Consensus 112 ~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll 191 (1350)
++..++....|+++..+++.+..... ... .....+++.++++.++..++.....+.....+.++-..+...+|+|++
T Consensus 90 ~~~~~~~~~~P~ll~~li~~~~~~~~-~~~--~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 90 YFGEATKAVQPLLLGRIIASYDPFNA-PER--EIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCC-Cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444455567888876532111 110 011112222222222233333333444455666666666667799999
Q ss_pred hCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 192 NQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATS 271 (1350)
Q Consensus 192 ~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 271 (1350)
+++...+++. ++|+++|++++|++++.+++... ..++...+.+++++++++....+.+++.++++++++.+..++.++
T Consensus 167 ~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~~ 244 (1490)
T TIGR01271 167 KLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQK 244 (1490)
T ss_pred hCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987 89999999999999999976533 333344444555555555444456777777888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 272 LAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLW 351 (1350)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (1350)
+.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++++..++..+...+......+...+..+ ....+.++.
T Consensus 245 ~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 322 (1490)
T TIGR01271 245 MMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFF--SGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888777776666554333322222 222344556
Q ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEE
Q 000689 352 YGGYLVRHHFTNGGLAIATMFAVMIGGLALA-QAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIEL 430 (1350)
Q Consensus 352 ~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~ 430 (1350)
++++.+.++ ++.+.+++++.++.....|+. .++..+..+.++.++++||.++++.++.. .... . .....|++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~-~~~~---~--~~~~~i~~ 395 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYK-TLEY---N--LTTTEVEM 395 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc-cccc---c--CCCCceEE
Confidence 677776644 678888887766666666764 68888999999999999999999865431 1110 0 11235999
Q ss_pred EEEEEECCCCC-------------------------------CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000689 431 KHVDFSYPSRP-------------------------------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERF 479 (1350)
Q Consensus 431 ~~v~f~y~~~~-------------------------------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~ 479 (1350)
+|++|.|+... .+++|+|+||+|++|++++|+||||||||||+++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 99999995310 13589999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccch
Q 000689 480 YDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQ 559 (1350)
Q Consensus 480 ~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~ 559 (1350)
++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.+++.++++.|++.+++..+|+|++|.
T Consensus 476 ~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~t~ 541 (1490)
T TIGR01271 476 LEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDKTV 541 (1490)
T ss_pred CCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccccc
Confidence 999999999998 5999999999999999999999975 45566777888888999999999999999
Q ss_pred hcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHH-HHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000689 560 VRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQE-ALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 560 ~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 638 (1350)
+|++|.+|||||||||+||||++++|+|||||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|++|+
T Consensus 542 vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~ 621 (1490)
T TIGR01271 542 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLH 621 (1490)
T ss_pred ccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987 4677778999999999999999999999999
Q ss_pred CCEEEEecChHHHHhccCCcHHHHHHHHHHHh-----hHh-----h------hh-hc-------c--cC--CCCCCccc-
Q 000689 639 QGSVSEIGTHDELIAKGENGVYAKLIRMQEAA-----HET-----A------LN-NA-------R--KS--SARPSSAR- 689 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~~-----~~~-----~------~~-~~-------~--~~--~~~~~~~~- 689 (1350)
+|+|++.|+++++... ++.|.+.+...... ... + .. .. . .. ...+....
T Consensus 622 ~g~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (1490)
T TIGR01271 622 EGVCYFYGTFSELQAK--RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEK 699 (1490)
T ss_pred CCEEEEEcCHHHHHhc--ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999875 45666655311000 000 0 00 00 0 00 00000000
Q ss_pred --------CCC-----------------CCcc--cccCC---------------CCCCCCc---c-----cccc------
Q 000689 690 --------NSV-----------------SSPI--IARNS---------------SYGRSPY---S-----RRLS------ 713 (1350)
Q Consensus 690 --------~~~-----------------~~~~--~~~~~---------------~~~~~~~---~-----~~~~------ 713 (1350)
... .... ..... ....... . ....
T Consensus 700 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1490)
T TIGR01271 700 RKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLM 779 (1490)
T ss_pred ccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcc
Confidence 000 0000 00000 0000000 0 0000
Q ss_pred CCc-c------C------------c-----c-------cccccC----CCC--chh-----hhhhhhhhhhHHHHHHHHh
Q 000689 714 DFS-T------S------------D-----F-------SLSLDA----TYP--SYR-----HEKLAFKEQASSFWRLAKM 751 (1350)
Q Consensus 714 ~~~-~------~------------~-----~-------~~~~~~----~~~--~~~-----~~~~~~~~~~~~~~~~~~~ 751 (1350)
... . . + . ....+. ..+ +.. .+.+....+...+..|++|
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y 859 (1490)
T TIGR01271 780 THSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRY 859 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHH
Confidence 000 0 0 0 0 000000 000 000 0000111122334444444
Q ss_pred cch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c-CCchh-H----------HHHHHHHH-HHHHHHHHHHHH
Q 000689 752 NSP--EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVY--Y-NPDHA-Y----------MIREIAKY-CYLLIGLSSAEL 814 (1350)
Q Consensus 752 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~----------~~~~~~~~-~~~~~~l~~~~~ 814 (1350)
.+. .+.++++.+++.++..++..+..+|+..|.... + ..... . .......| .++|++++++..
T Consensus 860 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 939 (1490)
T TIGR01271 860 ITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVL 939 (1490)
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHH
Confidence 332 223333333333344444445555655443210 0 00000 0 00011122 455666666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 815 LFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVAC 894 (1350)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~ 894 (1350)
++.+++.+++.+.+.+++.++|.+++++++++|++||++ +++|+++|||++|++.++..++..+..++..++.+++.+
T Consensus 940 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~--~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l 1017 (1490)
T TIGR01271 940 ALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT--MKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAI 1017 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999999999999999986 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHH----HHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHH
Q 000689 895 TAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDME----AAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSN 970 (1350)
Q Consensus 895 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 970 (1350)
+++++++|++++ +++|+++++++++.++.+. .++.+ ...+...+++.|++.|+.|||+|++++.+.++|.+.
T Consensus 1018 ~~i~~~~p~l~l---~~~~l~~~~~~~~~~~~~~-~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~ 1093 (1490)
T TIGR01271 1018 FVVSVLQPYIFI---AAIPVAVIFIMLRAYFLRT-SQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKA 1093 (1490)
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHH
Confidence 999888887544 3455555555555555443 33333 344567799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHH-HHHHHHHH--HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 971 LQTPLRRCFWKGQIAGSGYGVA-QFCLYASY--ALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIK 1047 (1350)
Q Consensus 971 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1350)
++...+..+...... .|..+. .++..+.. ++.++++.. .++.+.+..++.+......++..++..+.++..
T Consensus 1094 ~~~~~~~~~~~~~~~-~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~ 1167 (1490)
T TIGR01271 1094 LNLHTANWFLYLSTL-RWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDG 1167 (1490)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887654433222211 122211 11111111 111222221 122233333333333444555666667778889
Q ss_pred HHHHHHHHHHHhcccccCCCCCCC---------------CCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCC
Q 000689 1048 GGRAMRSVFDLLDRKTEIEPDDPD---------------ATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGK 1112 (1350)
Q Consensus 1048 ~~~a~~~v~~~~~~~~~~~~~~~~---------------~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge 1112 (1350)
.+.+++|+.++++.+++....... ..++.++..|.|+|+||+|+|++. .++||+|+||+|+|||
T Consensus 1168 ~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Ge 1246 (1490)
T TIGR01271 1168 LMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQ 1246 (1490)
T ss_pred HHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCC
Confidence 999999999999876653211000 001123456899999999999753 3579999999999999
Q ss_pred EEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHH
Q 000689 1113 TLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEII 1192 (1350)
Q Consensus 1113 ~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~ 1192 (1350)
+||||||||||||||+++|+|+|+ ++|+|+|||+||++++++++|++|+||||||+||+||||+||+++. .++|+++|
T Consensus 1247 kvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~ 1324 (1490)
T TIGR01271 1247 RVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIW 1324 (1490)
T ss_pred EEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHH
Confidence 999999999999999999999998 7999999999999999999999999999999999999999999875 58999999
Q ss_pred HHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCce
Q 000689 1193 EAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKT 1272 (1350)
Q Consensus 1193 ~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~T 1272 (1350)
+|++.++++++|.++|+||||+|+|+|.+||||||||||||||||++|+|||||||||+||++||+.|+++|++.+++||
T Consensus 1325 ~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~T 1404 (1490)
T TIGR01271 1325 KVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCT 1404 (1490)
T ss_pred HHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhhcccc
Q 000689 1273 TIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQ 1328 (1350)
Q Consensus 1273 vI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~~~~~ 1328 (1350)
||+||||++++.+||||+||++|+|+|+|+|++|+++ +|.|++|++.+......
T Consensus 1405 vI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~~~~~ 1458 (1490)
T TIGR01271 1405 VILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADRLKLF 1458 (1490)
T ss_pred EEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhChhccc
Confidence 9999999999999999999999999999999999975 89999999976555443
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-112 Score=1006.58 Aligned_cols=574 Identities=39% Similarity=0.605 Sum_probs=539.7
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
...+++++.|.++. |+.+..+.++.++......+.|++.++++|.+.... +....+...+..+.++.++..++++
T Consensus 132 ~~~~~rl~~l~~~~-~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~----~~~~~~~~~~~~l~~l~~~~a~~~~ 206 (716)
T KOG0058|consen 132 HTLLKRLLGLLKPE-WKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD----DSADALKRACTILLGLFLIGALANA 206 (716)
T ss_pred hhHHHHHHHHhchh-HHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc----chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34788999999876 556677888888888888888999999999876411 1123334455666677777889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
++.+|+.++++++..++|.++|+++++++++|||.+ ++|||+||++.|++.+.+.++..+...+.+.+..++++++||+
T Consensus 207 ~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~ 285 (716)
T KOG0058|consen 207 IRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS 285 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|+|++++++.+|+++++..+++++.+++.++.|++.++++.+++|.+++|||||+|+.|+.|.+||.+..++..+.+.
T Consensus 286 ~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~ 365 (716)
T KOG0058|consen 286 LSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSK 365 (716)
T ss_pred hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
|.+...+++++...+..++..+.++|||++++..|.+|.|.+++|++|......++..+...++.++++..|.+|+||++
T Consensus 366 k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 366 KEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCc-cCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000689 406 DHKPSIDRNSESGL-ELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~-~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
|++|.++.. +. .+...+|.|+|+||+|+||+||+.+||+|+||+|+|||+|||||||||||||+++||.|||+|++
T Consensus 446 dr~P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 446 DRKPRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred ccCCCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 999987542 32 22267899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCC
Q 000689 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g 564 (1350)
|+|++||+||+++++.+||++||+|.|||.||++||+|||+||.+++++|++..||++|++|+||.++|+||||.|||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000689 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 644 (1350)
.+|||||||||||||||++||.||||||||||||+++|..|+++|++.++++|||+|||||+|+++||+|+|+++|+|+|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHHHH
Q 000689 645 IGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~y~~l~~~~~~ 669 (1350)
.|+|+||++++ +|.|++|++.|..
T Consensus 683 ~G~h~eLl~~~-~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 683 MGTHDELLSKP-NGLYAKLVQRQLD 706 (716)
T ss_pred cccHHHHhhCc-ccHHHHHHHHhcc
Confidence 99999999983 6899999987754
No 10
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.2e-111 Score=1049.62 Aligned_cols=656 Identities=41% Similarity=0.656 Sum_probs=584.9
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCCCCC-chhhhh-------ccchhhhhhcc-----cCCCCCC
Q 000689 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYANPS-PQAQAQ-------ETTTTTKRQME-----NNSSSSS 71 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~-----~~~~~~~ 71 (1350)
.|.+..+..+ |.| +|++|+||+.|+..|+-+.+-.|.+.- .|+.++ ..+........ ...+..+
T Consensus 545 aHRLStIrna--D~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~ 622 (1228)
T KOG0055|consen 545 AHRLSTIRNA--DKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSR 622 (1228)
T ss_pred eeehhhhhcc--CEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccC
Confidence 6889988887 999 999999999999888877764332220 010000 00000000000 0000000
Q ss_pred C-----C--CCCCCCCCC-----CCccchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCch
Q 000689 72 S-----A--ANSEPKKPS-----DVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNM 139 (1350)
Q Consensus 72 ~-----~--~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~ 139 (1350)
. . ..++.++.. ...+.++.+++++.+| +|.++++|++++++.|...|++.++++.++..+... +.
T Consensus 623 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~--~~ 699 (1228)
T KOG0055|consen 623 GSNRSNLLSVKPEGEDPEEPVSEEDEKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPP--DD 699 (1228)
T ss_pred CccccccccccccccccccccccccccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCC--Ch
Confidence 0 0 000111011 1146789999999887 588899999999999999999999999999988642 22
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHH
Q 000689 140 DKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQ 219 (1350)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~ 219 (1350)
+.+......|++++++++++.+++.+++.+++.++|++++.|+|..+|+++++++++|||..+++|.|.+|+.+|+..++
T Consensus 700 ~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr 779 (1228)
T KOG0055|consen 700 DELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVR 779 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHH
Confidence 23333334488889999999999999999999999999999999999999999999999987666999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHH
Q 000689 220 DAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRV 299 (1350)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~ 299 (1350)
..+++.+..+++++..++++++++|+++|+|++++++++|++++..+...+.+.+...+..+...+.+..+.|+++||||
T Consensus 780 ~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrT 859 (1228)
T KOG0055|consen 780 AAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRT 859 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHH
Q 000689 300 VFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGL 379 (1350)
Q Consensus 300 vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~ 379 (1350)
|++|+.|+++.+.|.+..++..+...+.+.+.++.+++.+.+.++.+++.+|||++++.+|.+++.+++.+++.+.+...
T Consensus 860 V~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 860 VAALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEE
Q 000689 380 ALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTI 459 (1350)
Q Consensus 380 ~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~ 459 (1350)
.+++.....+++.+|+.|+.+||++++++|++++..+.+...++.+|.|+|+||+|+||+||+.+||+|+||+|++|+++
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 99999999999999999999999999999988765444445567889999999999999999999999999999999999
Q ss_pred EEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHH
Q 000689 460 ALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEA 539 (1350)
Q Consensus 460 ~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~ 539 (1350)
||||||||||||++.||.|||+|++|.|.|||+|+++++++|||++||+|.|||.||++||||||+||...++.+|+.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999666899999999
Q ss_pred HHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEE
Q 000689 540 ARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTL 619 (1350)
Q Consensus 540 ~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i 619 (1350)
|+.|++|+||.+||+||||.+||+|.+||||||||||||||++|||+||||||+|||||.++|+.||++|++.+.|||+|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000689 620 VIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 620 ~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~ 668 (1350)
+|||||+|+++||.|+|+++|+|+|+|+|++|+++ +|.|++|++.|.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQS 1226 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhcc
Confidence 99999999999999999999999999999999996 899999998764
No 11
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-110 Score=990.81 Aligned_cols=575 Identities=37% Similarity=0.616 Sum_probs=546.7
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
..+|+++.+.+|+|+++..+.++.++......+.|++.+.+++.+...+. ........+.++.++.++..++++++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~--~~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDD--SADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999998876111 1334455677788888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 902 (1350)
++.++++++..++|..+|+++++++++|||. |.+|++++|++.|+..+.+.++..+...+.+.+..++++..|++++|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~--nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFDE--NKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--CCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 9999999999999999999999999999996 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
.|+++.+..+|++.+...++.++.++.+++.+++.+.++....|.+.+++|||+|+.|....++|.+.++...+...+.+
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000689 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~ 1062 (1350)
...+++++..+++.++....++|||++++..|.++.+.+..++++......++..+.....++.++..|.+|+++++|++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000689 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1142 (1350)
|..++. +...|....|.|+|+||+|+||.||+.|||+|+||+|+|||+||+||||||||||++++|+|||+|++|+|
T Consensus 449 P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~I 525 (716)
T KOG0058|consen 449 PRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRI 525 (716)
T ss_pred CCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 988754 22233357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCC
Q 000689 1143 MIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1143 ~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
++||+||++++.++||++||+|.|||+||++||+|||.||.++++||||.+|+++||+|+||.++|+||||.|||+|.+|
T Consensus 526 llDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qL 605 (716)
T KOG0058|consen 526 LLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQL 605 (716)
T ss_pred EECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecC
Q 000689 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt 1302 (1350)
||||||||||||||+|||+||||||||||||+++|..||++|++..+|+|||+|||||+||++||+|+|+++|+|+|.|+
T Consensus 606 SGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~ 685 (716)
T KOG0058|consen 606 SGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGT 685 (716)
T ss_pred cchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHHHHhhhc
Q 000689 1303 HSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|+|||++ ++|.|++|++.|...
T Consensus 686 h~eLl~~-~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 686 HDELLSK-PNGLYAKLVQRQLDS 707 (716)
T ss_pred HHHHhhC-cccHHHHHHHHhccc
Confidence 9999998 689999999988554
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.7e-93 Score=881.89 Aligned_cols=570 Identities=31% Similarity=0.462 Sum_probs=515.2
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
+..+.+++..+.++++. +.-.++.+++..+.....|.++..++|.+..... ...+....+.++++++...++.+
T Consensus 139 ~~~~~~f~~~~~~~~~~-l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-----~~tL~vl~ig~~~~~l~~~~l~~ 212 (709)
T COG2274 139 PFGLSWFIPLLFKYRRL-LFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-----RSTLTVLAIGLLLAALFEALLRL 212 (709)
T ss_pred ccchHhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-----hhHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666655433 2223333333333334444456777887765322 22334455566667777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
++.++..+++.++..++-.++|+|++++|+.||.++ ++|++++|+. |.+.|+++++..+...+.++.++++.+++|++
T Consensus 213 lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ 290 (709)
T COG2274 213 LRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFL 290 (709)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999999996 99999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|+|++++++.+|+++++..++.+.+++..++..+..++.++...|++.||++||+.+.|..+..+|++...++.+.++
T Consensus 291 ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~ 370 (709)
T COG2274 291 YSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGF 370 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+..........+..++..++.++++|+|+++|.+|.+|.|.++++.+.......|+..+...+..+++++.+.+|+.+++
T Consensus 371 ~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil 450 (709)
T COG2274 371 KTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDIL 450 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988888888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000689 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+.++|.+... .....+...|.|+|+||+|+|+.++ .++|+|+||+|++||++||||+||||||||+|+|+|+|+|++|
T Consensus 451 ~~~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G 528 (709)
T COG2274 451 DTPPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQG 528 (709)
T ss_pred cCCccccccc-ccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 9988753311 1124456789999999999997543 4799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCC
Q 000689 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~ 565 (1350)
+|++||.|+.++++.++|++||||+||+.||+|||+|||++++|++++|++++||+.+++|+||.++|.||+|.+||+|.
T Consensus 529 ~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~ 608 (709)
T COG2274 529 RILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGA 608 (709)
T ss_pred eEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 645 (1350)
+|||||||||+|||||++||+||||||||||||+++|+.|.+.|.++..|+|+|+||||++++++||||+||++|+|+++
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~ 688 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQ 688 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHH
Q 000689 646 GTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
|+|+||++. +|.|++++..|
T Consensus 689 gs~~ell~~--~g~y~~l~~~q 708 (709)
T COG2274 689 GSHEELLAQ--GGLYARLYQQQ 708 (709)
T ss_pred CCHHHHHHh--cChHHHHHhcc
Confidence 999999998 89999998754
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.5e-91 Score=869.18 Aligned_cols=557 Identities=31% Similarity=0.470 Sum_probs=504.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 755 EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKR 834 (1350)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1350)
.+..+.-.++.+++.+++..+.+++...+++....... ........+.++++++...++.+++.+++..++.++...
T Consensus 152 ~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~ 228 (709)
T COG2274 152 YRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLE 228 (709)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 33333333333444444444444444444554432221 122333445566777888899999999999999999999
Q ss_pred HHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 835 VREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPV 914 (1350)
Q Consensus 835 lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl 914 (1350)
+-.+.|+|+++.|+.||.+ +++|++++|+ +|.+.+++++...+...+.++.+.++.++++++++|+|++++++.+|+
T Consensus 229 l~~~~~~hll~Lpl~~f~~--r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l 305 (709)
T COG2274 229 LSGRFFRHLLRLPLSYFEK--RSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPL 305 (709)
T ss_pred HHHHHHHHHHcCcHHHccC--CChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999985 7899999998 599999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000689 915 VVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQF 994 (1350)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1350)
+++..++...++++..++..+..+...+++.|++.|++|||+.+.|..+..+|.+...+..+..++..........+.++
T Consensus 306 ~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (709)
T COG2274 306 NVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSL 385 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 99999999999998888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 000689 995 CLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATP 1074 (1350)
Q Consensus 995 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~ 1074 (1350)
+..++.++++|+|++++..|.+|+|.++++.+.......++..+...+.++++...+.+|+.++++.++|.+.+.. ..
T Consensus 386 l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~--~~ 463 (709)
T COG2274 386 LQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT--LI 463 (709)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc--cc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988654332 12
Q ss_pred CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH
Q 000689 1075 VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1075 ~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l 1154 (1350)
..+...|+|+|+||+|+|+.++ +++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++||+|++++++
T Consensus 464 ~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~ 542 (709)
T COG2274 464 HLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDL 542 (709)
T ss_pred cccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCH
Confidence 2345789999999999998663 379999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+++|++|+|||||++||+|||||||++++|++++||+++||+.+++|+||.++|.||||+|||+|.+|||||||||+|||
T Consensus 543 ~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalAR 622 (709)
T COG2274 543 ASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALAR 622 (709)
T ss_pred HHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCch
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~ 1314 (1350)
||+++|+||||||||||||++||+.|.+.|.+..+|||+|+||||++++++||||+|||+|+|+|+|+|+||++. +|.
T Consensus 623 aLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~--~g~ 700 (709)
T COG2274 623 ALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ--GGL 700 (709)
T ss_pred HhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh--cCh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998 899
Q ss_pred hHHHHHHh
Q 000689 1315 YARMIQLQ 1322 (1350)
Q Consensus 1315 y~~l~~~q 1322 (1350)
|+++|+.|
T Consensus 701 y~~l~~~q 708 (709)
T COG2274 701 YARLYQQQ 708 (709)
T ss_pred HHHHHhcc
Confidence 99999876
No 14
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-88 Score=906.32 Aligned_cols=570 Identities=30% Similarity=0.476 Sum_probs=495.3
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.+.+++++++++++ .++++++++++.+.+.|++|++++.+++.+... .........+++++++++++.+++.+++
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~l~~~~~~i~~~~~~~l~ 886 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDF----ANLEANSNKYSLYILVIAIAMFISETLK 886 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666544 367788888899999999999999999976421 1112223346666777777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDT--EVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~--~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
.++..++++++..++|.++|++++++|++|||+ + ++|++++|+++|++.+++++...+..++..++.++++++++++
T Consensus 887 ~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~-~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~ 965 (1466)
T PTZ00265 887 NYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKH-APGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFY 965 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999986 5 8999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHchHHHHHHhccHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLA-GK-----------------SQEALSQAGNIVEQTVVQIRVVFAFVGES 307 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~E~l~~i~~vk~f~~e~ 307 (1350)
++|.+++++++++|++ ...+.++.+... .+ .++..++.+..++|+++||++||+|+.|+
T Consensus 966 ~~~~l~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~ 1042 (1466)
T PTZ00265 966 FCPIVAAVLTGTYFIF---MRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLED 1042 (1466)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchH
Confidence 9999988766544443 333333322211 11 23346677899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 308 KALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPS 387 (1350)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~ 387 (1350)
.+.++|.+..++..+...+.....++..++..++.++..++++|+|++++.+|.+++|.++++++++++...++..+...
T Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~ 1122 (1466)
T PTZ00265 1043 YFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSL 1122 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888899999999888888999999999999999999999999887766666667888889
Q ss_pred HHHHHHHHHHHHHHHHHHccCCCCCCCCCCCcc---CCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcC
Q 000689 388 ISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLE---LDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGS 464 (1350)
Q Consensus 388 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~ 464 (1350)
+..+++++++++|++++++.+++++..+..+.. +....|.|+|+||+|+||++++.++|+|+||+|++|+++|||||
T Consensus 1123 ~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~ 1202 (1466)
T PTZ00265 1123 KGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGE 1202 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECC
Confidence 999999999999999999987654221111111 12345789999999999876666899999999999999999999
Q ss_pred CCCcHHHHHHHHhcCCCC------------------------------------------------------CCcEEEEC
Q 000689 465 SGSGKSTVVSLIERFYDP------------------------------------------------------TSGQVLLD 490 (1350)
Q Consensus 465 sGsGKSTl~~ll~~~~~~------------------------------------------------------~~G~i~i~ 490 (1350)
||||||||+++|+|+|+| ++|+|++|
T Consensus 1203 SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~id 1282 (1466)
T PTZ00265 1203 TGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLD 1282 (1466)
T ss_pred CCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEEC
Confidence 999999999999999999 69999999
Q ss_pred CeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChH
Q 000689 491 GHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGG 570 (1350)
Q Consensus 491 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 570 (1350)
|+|+++++.+++|++||||+|||+||++||+|||+||+|+++++++++||+.+++++||.+||+||||.|||+|.+||||
T Consensus 1283 G~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGG 1362 (1466)
T PTZ00265 1283 GVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGG 1362 (1466)
T ss_pred CEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeC----CEEE-
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQ----GSVS- 643 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~----G~i~- 643 (1350)
|||||||||||+++|+||||||||||||+++|+.|+++|+++. +++|+|+||||++++++||+|+||++ |+++
T Consensus 1363 QkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~ 1442 (1466)
T PTZ00265 1363 QKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQ 1442 (1466)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEE
Confidence 9999999999999999999999999999999999999999984 69999999999999999999999999 9955
Q ss_pred EecChHHHHhccCCcHHHHHHHHH
Q 000689 644 EIGTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 644 ~~g~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
|+|+|+||+++. +|.|+++++.|
T Consensus 1443 e~Gth~eLl~~~-~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1443 AHGTHEELLSVQ-DGVYKKYVKLA 1465 (1466)
T ss_pred EecCHHHHHhcC-CChHHHHHhhc
Confidence 899999999731 79999998754
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.7e-87 Score=846.36 Aligned_cols=568 Identities=21% Similarity=0.263 Sum_probs=488.6
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++++++|.+++++ .+++++++.++..++.+..|++++.++|.+.....+. ..+..+...++++.++..++.+++
T Consensus 9 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 83 (588)
T PRK11174 9 LTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPR----EALLPPFILLILLFVLRALLAWLR 83 (588)
T ss_pred hhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788889888755 4566777778888888888889999999754211111 112222333344455567778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1350)
.++..+.+.++..++|.++|+|++++|.+||++. ++|++++|+++|++.+++.+.+.+..++..++.+++.++++++++
T Consensus 84 ~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 162 (588)
T PRK11174 84 ERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPIN 162 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000689 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+.
T Consensus 163 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 242 (588)
T PRK11174 163 WAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEV 242 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888999999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLA---------IATMFAVMIGGLALAQAAPSISAFAKAKVAA 398 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~---------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~ 398 (1350)
.+......++..++..+..+++++++++.+. |.++.|.+ +.++.+......|+..+...+..++++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~ 321 (588)
T PRK11174 243 LRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAA 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666666666555555555556665543 77777754 1111222334568889999999999999999
Q ss_pred HHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000689 399 AKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIER 478 (1350)
Q Consensus 399 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 478 (1350)
+|+.++++.+++.+. ...........+.|+|+||+|.|++ ++++|+|+||+|++|+++|||||||||||||+++|+|
T Consensus 322 ~ri~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g 398 (588)
T PRK11174 322 ESLVTFLETPLAHPQ-QGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLG 398 (588)
T ss_pred HHHHHHHcCCCcccC-CCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 999999987654221 1110111112357999999987763 3479999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccc
Q 000689 479 FYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 479 ~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t 558 (1350)
+| |++|+|.+||+|+++++.+++|++|+||||+|+||++||+|||++|+|++++++++++++.|++++|+.+||+||||
T Consensus 399 ~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 399 FL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred CC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000689 559 QVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 559 ~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 638 (1350)
.+||+|.+|||||||||+|||||++||+|||||||||+||+++++.|+++|+++.+++|+|+||||++++++||+|+||+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000689 639 QGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~ 668 (1350)
+|+|+|.|+|+||+++ ++.|+++++.|.
T Consensus 558 ~G~i~e~G~~~eL~~~--~~~y~~l~~~q~ 585 (588)
T PRK11174 558 DGQIVQQGDYAELSQA--GGLFATLLAHRQ 585 (588)
T ss_pred CCeEeecCCHHHHHhc--chHHHHHHHHhh
Confidence 9999999999999987 789999998765
No 16
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.9e-86 Score=834.96 Aligned_cols=562 Identities=36% Similarity=0.571 Sum_probs=505.3
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
+++++.+.+ .+ .+.+++++.++..+.....|.+++.++|.+.. +. .....+..+++++.++..++.++..
T Consensus 4 ~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~----~~~~~~~~~~~~~~~~~~v~~~~~~ 73 (567)
T COG1132 4 LRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA---DL----GELLELLLLLLLLALLGGVLRALQS 73 (567)
T ss_pred HHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655 34 55666777777777777778888888887651 11 1222233344444456677778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
++..+.+.++..++|.++|++++++|.+||+++ ++|++++|+++|++.++..+.+....+...+..+++.+++++..+|
T Consensus 74 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (567)
T COG1132 74 YLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSW 152 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888888899999999999999999999999998 9999999999999999999998866666678888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++..|++.+...++.++.++..+..++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 153 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (567)
T COG1132 153 RLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRAS 232 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888899999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...+...++..++..+..++++++|++++..+.++.|.+++++.+......|+..+...+..++.+..+++|++++++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~ 312 (567)
T COG1132 233 RLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEE 312 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888888888899999999999999999999999999999999988888899999999999999999999999999987
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
+++.+... ......+.|+|+||+|+|++ ++++|+|+||++++||++|||||||||||||+++|+|+|+|++|+|+
T Consensus 313 ~~~~~~~~---~~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~ 387 (567)
T COG1132 313 PEVEDPPD---PLKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEIL 387 (567)
T ss_pred ccccCCCC---CCCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEE
Confidence 65432111 12334577999999999974 34799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
+||+|+++++.+++|++||+|||||+||++||+|||.+|+|+++++++++||+.+++++||+++|+||||.+||+|.+||
T Consensus 388 idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LS 467 (567)
T COG1132 388 IDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLS 467 (567)
T ss_pred ECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+||||+++||+|||||||||+||+++|+.|+++++++.++||+|+||||++++++||+|+||++|+|+|.|+|
T Consensus 468 gGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h 547 (567)
T COG1132 468 GGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTH 547 (567)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHHH
Q 000689 649 DELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 649 ~~l~~~~~~~~y~~l~~~~~ 668 (1350)
+||+++ +|.|+++|+.|.
T Consensus 548 ~eLl~~--~g~y~~l~~~~~ 565 (567)
T COG1132 548 EELLAK--GGLYARLYQAQG 565 (567)
T ss_pred HHHHHc--CCHHHHHHHHhh
Confidence 999998 899999998764
No 17
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.1e-86 Score=830.31 Aligned_cols=553 Identities=33% Similarity=0.524 Sum_probs=491.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 755 EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKR 834 (1350)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 834 (1350)
.+ .+.++.++.++...+....+++++.+++... . .......+...++++.++..++.++..++..+.+.+...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 86 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-A----DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVAD 86 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45 5566666666666777777777777776655 1 1122334445555566677778888888888888999999
Q ss_pred HHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 835 VREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPV 914 (1350)
Q Consensus 835 lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl 914 (1350)
+|+++|+++++.|++||++ +++|++++|+++|++.++..+......+...++.+++.+++++..+|.++++++...|+
T Consensus 87 lr~~~~~~l~~~~~~~~~~--~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~ 164 (567)
T COG1132 87 LRRDLFEKLLRLPLSFFDK--AKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPL 164 (567)
T ss_pred HHHHHHHHHHhCCHHHhCc--CCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999996 77999999999999999999999866666678888899999999999999999999888
Q ss_pred HHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Q 000689 915 VVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQF 994 (1350)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1350)
+.+.........+...+..++..++..+.+.|.++|+++||+|+.++...++|.+..+...+...+.....+....+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (567)
T COG1132 165 LALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLL 244 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777766655577788888888999999999999999999999999999999888888877777767777777788888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCC
Q 000689 995 CLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATP 1074 (1350)
Q Consensus 995 ~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~ 1074 (1350)
+..+..++.++++.+++..+.+++|.++.++.+......++..+......+..+..+++|++++++.+++.......
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--- 321 (567)
T COG1132 245 LSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---
Confidence 89999999999999999999999999888888888888899999999999999999999999999986654322111
Q ss_pred CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH
Q 000689 1075 VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1075 ~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l 1154 (1350)
.....|+|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|||+||+++++
T Consensus 322 -~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~ 398 (567)
T COG1132 322 -LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISL 398 (567)
T ss_pred -CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCH
Confidence 1234578999999999974 3479999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
++||++|++|||||+||+|||+|||++|+++++|||+++||+.|+++|||+++|+||||.|||+|.+|||||||||||||
T Consensus 399 ~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiAR 478 (567)
T COG1132 399 DSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIAR 478 (567)
T ss_pred HHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCch
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~ 1314 (1350)
|++++|||||||||||+||++||+.|++++++..+|||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.
T Consensus 479 all~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~--~g~ 556 (567)
T COG1132 479 ALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK--GGL 556 (567)
T ss_pred HHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc--CCH
Confidence 999999999999999999999999999999988899999999999999999999999999999999999999998 899
Q ss_pred hHHHHHHhh
Q 000689 1315 YARMIQLQR 1323 (1350)
Q Consensus 1315 y~~l~~~q~ 1323 (1350)
|++||+.|.
T Consensus 557 y~~l~~~~~ 565 (567)
T COG1132 557 YARLYQAQG 565 (567)
T ss_pred HHHHHHHhh
Confidence 999999875
No 18
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.5e-85 Score=842.36 Aligned_cols=566 Identities=33% Similarity=0.500 Sum_probs=502.9
Q ss_pred ccchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 85 TPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASS 164 (1350)
Q Consensus 85 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1350)
....+++++++.++. +..+++++++.++..++....|++++.++|.+.... +.+.+ .....+++++.++..++.
T Consensus 145 ~~~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~ 218 (711)
T TIGR00958 145 TADLLFRLLGLSGRD-WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDK-GPPAL----ASAIFFMCLLSIASSVSA 218 (711)
T ss_pred hhhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CHHHH----HHHHHHHHHHHHHHHHHH
Confidence 345678888888765 445566777777777778888888999999865321 11111 112233334445566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 165 WAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF 244 (1350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1350)
+++.+++.+.+.++..++|.++|++++++|.+||++. ++|++++|+++|++.+++.+...+..++.++..+++.+++++
T Consensus 219 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~ 297 (711)
T TIGR00958 219 GLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFML 297 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888889999999999999999999999999999998 999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHH
Q 000689 245 SAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLG 324 (1350)
Q Consensus 245 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~ 324 (1350)
+++|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+..
T Consensus 298 ~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 377 (711)
T TIGR00958 298 WLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLN 377 (711)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRI 404 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 404 (1350)
.+.....+....+..++..+..++++++|++++.+|.++.|.+++++.+......|+..+...+..+++++.+.+|++++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~ 457 (711)
T TIGR00958 378 KRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEY 457 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777776666666666777778888999999999999999999999988888899999999999999999999999999
Q ss_pred HccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC
Q 000689 405 IDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 405 l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~ 484 (1350)
++.+++.+.. ....+.+..+.|+|+||+|+||+++++++|+|+||+|++||++|||||||||||||+++|+|+|+|++
T Consensus 458 l~~~~~~~~~--~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 458 LDRKPNIPLT--GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred hCCCCCCCCC--CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 9887654321 11122234578999999999987655689999999999999999999999999999999999999999
Q ss_pred cEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCC
Q 000689 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERG 564 (1350)
Q Consensus 485 G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g 564 (1350)
|+|.+||+|+++++.+++|++|+||+|||++|++||+|||.+|.++.++++++++++.+++++++.++|+||||.+||+|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000689 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 565 ~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 644 (1350)
.+|||||||||+||||++++|+|||||||||+||+++|+.+++ . ...+++|+|+||||+++++.||+|+||++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998 3 3347899999999999999999999999999999
Q ss_pred ecChHHHHhccCCcHHHHH
Q 000689 645 IGTHDELIAKGENGVYAKL 663 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~y~~l 663 (1350)
+|+|+||+++ ++.|+++
T Consensus 694 ~Gt~~eL~~~--~~~y~~l 710 (711)
T TIGR00958 694 MGTHKQLMED--QGCYKHL 710 (711)
T ss_pred eeCHHHHHhC--CCchHhc
Confidence 9999999987 6888875
No 19
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.2e-84 Score=823.42 Aligned_cols=568 Identities=22% Similarity=0.292 Sum_probs=479.9
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++++.++.++.++++++++++..++....++++..+++.....+.. ......+..+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677778888888888888888888888888888888765422111 11222344455556667778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l 904 (1350)
...+.++..++|.++|+++++.|.+||++ +++|++++|+++|++.+++.+...+..++..++.+++.++++++++|++
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQG--KPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhcc--CCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999985 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++......+..+...++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+....
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988887776666677777777788888999999999999999999999999999999888877776666555
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKT---------IRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v 1055 (1350)
......+..++..+..+++.+++++... |.+++|.+ +.+.+.......++..+......+.++..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555544445455544433 66666643 1111222334567778888888999999999999
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000689 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1135 (1350)
.++++.+++.++... .+.+....+.|+|+||+|.|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|
T Consensus 325 ~~~l~~~~~~~~~~~--~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~ 400 (588)
T PRK11174 325 VTFLETPLAHPQQGE--KELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL 400 (588)
T ss_pred HHHHcCCCcccCCCc--cccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 999987653221111 1111112457999999998864 347999999999999999999999999999999999999
Q ss_pred CCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccc
Q 000689 1136 EPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFV 1215 (1350)
Q Consensus 1136 ~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~v 1215 (1350)
|++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+++++++|+|+++|++.|++++||+++|+||||.|
T Consensus 401 -p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~v 479 (588)
T PRK11174 401 -PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPI 479 (588)
T ss_pred -CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccc
Confidence 9999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCC
Q 000689 1216 GERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDG 1295 (1350)
Q Consensus 1216 ge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~G 1295 (1350)
||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++.+||+|+||++|
T Consensus 480 ge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G 559 (588)
T PRK11174 480 GDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDG 559 (588)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999998999999999999999999999999999
Q ss_pred eEEEecChhHHhhcCCCchhHHHHHHhhh
Q 000689 1296 KVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1296 rIvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
+|+|.|+|+||+++ +|.|+++++.|..
T Consensus 560 ~i~e~G~~~eL~~~--~~~y~~l~~~q~~ 586 (588)
T PRK11174 560 QIVQQGDYAELSQA--GGLFATLLAHRQE 586 (588)
T ss_pred eEeecCCHHHHHhc--chHHHHHHHHhhc
Confidence 99999999999987 8999999988753
No 20
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-83 Score=826.50 Aligned_cols=564 Identities=27% Similarity=0.329 Sum_probs=498.0
Q ss_pred chHHHHHHh-hchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRF-ADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 87 ~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
..+++++++ +++.++ .++..++++++..++....|++++.++|.+.... +. ..+..+++.++++.++.+++.+
T Consensus 121 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~ 194 (686)
T TIGR03797 121 LGLRDLLRFALRGARR-DLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA-DR----SLLVQIALALLAAAVGAAAFQL 194 (686)
T ss_pred ccHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-Ch----hHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666 444433 3445555666666666667777888998765321 11 1222233444445555677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
++.++..+.+.++..++|..+|+|++++|+.||+++ ++|++++|++ |++.+++.+...+...+.++..+++.++++++
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 272 (686)
T TIGR03797 195 AQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFY 272 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999999998 9999999997 89999999988888888888888888899999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|.+++++++.+|+++++..++.+..++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...
T Consensus 273 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 352 (686)
T TIGR03797 273 YSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLEL 352 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l 405 (1350)
+......+...+..++..+..++++|+|++++.+|.+|.|.++++..+......|+.++...+..+++++.+.+|+.+++
T Consensus 353 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 432 (686)
T TIGR03797 353 SAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPIL 432 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98888888888888888888889999999999999999999999988888888899999999999999999999999999
Q ss_pred ccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000689 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
+.+++.+. ....+....+.|+|+||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|
T Consensus 433 ~~~~e~~~---~~~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 508 (686)
T TIGR03797 433 EALPEVDE---AKTDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESG 508 (686)
T ss_pred cCCccccc---CcCCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC
Confidence 87655321 111122345689999999999743 35799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCC
Q 000689 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGV 565 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~ 565 (1350)
+|++||+|+++++.+++|++||||||||++|++||+|||.+|+| +++++++++++.+++++++.++|+||||.+||+|.
T Consensus 509 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~ 587 (686)
T TIGR03797 509 SVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGG 587 (686)
T ss_pred EEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCC
Confidence 99999999999999999999999999999999999999999998 89999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 645 (1350)
+|||||||||+|||||+++|+|||||||||+||+++|+.+.+.|+++ ++|+|+||||+++++.||+|+||++|+|+|.
T Consensus 588 ~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~ 665 (686)
T TIGR03797 588 TLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQ 665 (686)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999886 6899999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHH
Q 000689 646 GTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
|+|+||+++ ++.|+++++.|
T Consensus 666 G~~~~Ll~~--~~~y~~l~~~q 685 (686)
T TIGR03797 666 GTYDELMAR--EGLFAQLARRQ 685 (686)
T ss_pred CCHHHHHhC--CcHHHHHHHhc
Confidence 999999987 79999998754
No 21
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.2e-84 Score=828.25 Aligned_cols=565 Identities=32% Similarity=0.524 Sum_probs=499.9
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
..+++++++.++.+..+..++++.++..++....+++.+.+++........ .......++++++.++..++.+++.+
T Consensus 147 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (711)
T TIGR00958 147 DLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRGG 223 (711)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777788888888888888888888888888888888876532211 11222333444556667778888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 902 (1350)
++.+++.++..++|+++|++++++|++||++ +++|++++|+++|++.+++.+...+..++.+++.+++.+++++.++|
T Consensus 224 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~--~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~ 301 (711)
T TIGR00958 224 SFNYTMARINLRIREDLFRSLLRQDLGFFDE--NKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSP 301 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999985 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
++++++++.+|+.++...+..++.+...++.++..++..+++.|+++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 302 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 381 (711)
T TIGR00958 302 RLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKA 381 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888877777777777778888888889999999999999999999999999999999998887776666
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000689 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~ 1062 (1350)
...+........+..+..++.+++|.+++..|.++.+.++.+..+......++..+.....++.++..+.+|+.++++.+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~ 461 (711)
T TIGR00958 382 LAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRK 461 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 66665555666667777888899999999999999999999888888888999999999999999999999999999876
Q ss_pred ccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000689 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1142 (1350)
++.++.. ...+++..|.|+|+||+|+||++++.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 462 ~~~~~~~---~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I 538 (711)
T TIGR00958 462 PNIPLTG---TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQV 538 (711)
T ss_pred CCCCCCC---CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEE
Confidence 6543211 1112234678999999999997666789999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCC
Q 000689 1143 MIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1143 ~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
++||+|+++++.+++|++|+||||||++|+|||||||.++.++++|+++++|++.++++++|+++|+||||.+||+|.+|
T Consensus 539 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 618 (711)
T TIGR00958 539 LLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQL 618 (711)
T ss_pred EECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcC
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecC
Q 000689 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1223 SgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt 1302 (1350)
|||||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||++++..||+|+||++|+|+|+|+
T Consensus 619 SGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 619 SGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 9999999999999999999999999999999999999999 33457899999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHH
Q 000689 1303 HSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l~ 1319 (1350)
|+||+++ +|.|++|+
T Consensus 697 ~~eL~~~--~~~y~~lv 711 (711)
T TIGR00958 697 HKQLMED--QGCYKHLV 711 (711)
T ss_pred HHHHHhC--CCchHhcC
Confidence 9999987 78999874
No 22
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.5e-84 Score=831.62 Aligned_cols=565 Identities=26% Similarity=0.359 Sum_probs=499.1
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++.+++++++. ++..++++++..++....|++++.++|.+.... . ...+..++..++++.++..++.++
T Consensus 142 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~-~----~~~l~~~~~~~~~~~~~~~~~~~~ 215 (708)
T TIGR01193 142 NSLLKFIPLITRQKKL-IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHK-M----MGTLGIISIGLIIAYIIQQILSYI 215 (708)
T ss_pred chHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-C----hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577788887766443 445555566666666677778889999765421 1 112222333334444556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1350)
+.++..+.+.++..++|.++|+|++++|+.||++. ++|++++|++ |++.+++++...+...+.++..+++.+++++++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (708)
T TIGR01193 216 QIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQ 293 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999998 9999999998 999999999888888888888888888889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000689 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|++++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++...+..+...+
T Consensus 294 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 373 (708)
T TIGR01193 294 NMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFK 373 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.....+....+..++..+..++++|+|++++.+|.+|.|.++++..+......|+.++...+..+++++.+.+|+.++++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 453 (708)
T TIGR01193 374 YQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYL 453 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88877777777777777888889999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000689 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+... .........|.|+++||+|+|++ ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+
T Consensus 454 ~~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 454 VDSEFINKK-KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred CCCcccccc-cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 766542211 10112234578999999999973 347999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcC-CCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCC
Q 000689 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLG-RPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGV 565 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g-~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~ 565 (1350)
|++||+|+++++.+++|++||||||||+||++||+|||.+| .+++++++++++++.+++++++.++|+||||.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99999999999999999999999999999999999999999 57889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 645 (1350)
+|||||||||+||||++++|+|||||||||+||+++|+.+++.|+++ +++|+|+||||+++++.||+|++|++|++++.
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~ 689 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQ 689 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999885 68999999999999999999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHH
Q 000689 646 GTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~~ 665 (1350)
|+|+||+++ ++.|+++++
T Consensus 690 G~~~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 690 GSHDELLDR--NGFYASLIH 707 (708)
T ss_pred CCHHHHHhc--CCcHHHHhh
Confidence 999999987 789998874
No 23
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.5e-83 Score=802.32 Aligned_cols=567 Identities=23% Similarity=0.275 Sum_probs=491.1
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++++++|.+++++ .+++++++.++..++....|.+++.++|...............+. ....+++++++..++.++..
T Consensus 4 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 81 (574)
T PRK11160 4 LLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYML-PAAGVRGAAIGRTAGRYGER 81 (574)
T ss_pred hHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHh-HHHHHHHHHHHHHHHHHHHH
Confidence 5567777777644 455666777776666667777888888864311110000011111 12223344456677888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
++..+.++++..++|.++|+|++++|.++|++. ++|++++|+++|++.+++++.+.+..++..++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (574)
T PRK11160 82 LVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDL 160 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAV-IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
++++++++++|++++ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+.
T Consensus 161 ~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (574)
T PRK11160 161 TLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQ 240 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887655 4466778888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVM-IGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.+..+...++..++..+..++++++|++++ +|.++.|.+++++.+.. ....++..+...+..+++++++++|+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~ 319 (574)
T PRK11160 241 ANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITE 319 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 988888888888888888888899999985 78899999988765543 3345777778888999999999999999999
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000689 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+.... .......+.|+|+||+|+|++. ++++|+|+||++++||++|||||||||||||+++|+|+|+|++|+
T Consensus 320 ~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 320 QKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 8765322111 1112234679999999999753 246999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCC
Q 000689 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 566 (1350)
|.+||+|+++++.+++|++|+||+|||++|++||+|||++++|++++++++++++.+++++++.+ |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
|||||||||+||||++++|+|||||||||+||+++++.+++.|.++.+++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000689 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~y~~l~~ 665 (1350)
+|+||+++ ++.|+++++
T Consensus 556 ~~~~l~~~--~g~y~~l~~ 572 (574)
T PRK11160 556 THQELLAQ--QGRYYQLKQ 572 (574)
T ss_pred CHHHHHhc--CcHHHHHHh
Confidence 99999988 799999885
No 24
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3e-83 Score=826.57 Aligned_cols=565 Identities=25% Similarity=0.313 Sum_probs=497.0
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..++.++++++++++ .+...++++++..++....|++++.++|.+..... . ..+..+...++++.++.+++.++
T Consensus 140 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~----~~l~~~~~~~~~~~~~~~~~~~~ 213 (710)
T TIGR03796 140 SLLRALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-Q----DWLRPLLLGMGLTALLQGVLTWL 213 (710)
T ss_pred ccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-h----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777766543 33444455555555555566678888887653211 1 11222333344445556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1350)
+.++....+.++..++|.++|+|++++|++||+++ ++|++++|+++| +.+++++...+...+.++..+++.+++++++
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 291 (710)
T TIGR03796 214 QLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLY 291 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999998 999999999988 6899999988999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000689 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|.+++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||++++|+.+.++|.+...+..+...+
T Consensus 292 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 371 (710)
T TIGR03796 292 DPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQE 371 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
......+...+..++..+..++++++|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 372 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 451 (710)
T TIGR03796 372 LGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLR 451 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888888888888899999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCC---C-CccC-CCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 000689 407 HKPSIDRNSE---S-GLEL-DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD 481 (1350)
Q Consensus 407 ~~~~~~~~~~---~-~~~~-~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~ 481 (1350)
.+++.+.... . .... ....+.|+++||+|+|++. ++++|+|+||+|++||++|||||||||||||+++|+|+|+
T Consensus 452 ~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~ 530 (710)
T TIGR03796 452 NPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ 530 (710)
T ss_pred CCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 7665422110 0 0111 2345789999999999853 3579999999999999999999999999999999999999
Q ss_pred CCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhc
Q 000689 482 PTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVR 561 (1350)
Q Consensus 482 ~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~ 561 (1350)
|++|+|.+||+|+++++.+++|++||||||+|++|++||+|||.+++|++++++++++++.+++++++.++|+||||.+|
T Consensus 531 p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~ 610 (710)
T TIGR03796 531 PWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELA 610 (710)
T ss_pred CCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceec
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000689 562 ERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 562 ~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~ 641 (1350)
|+|.+|||||||||+|||||+++|+|||||||||+||+++|+.+.+.|++ .++|+|+||||+++++.||+|++|++|+
T Consensus 611 e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~ 688 (710)
T TIGR03796 611 EGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGK 688 (710)
T ss_pred cCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999999986 5899999999999999999999999999
Q ss_pred EEEecChHHHHhccCCcHHHHHH
Q 000689 642 VSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 642 i~~~g~~~~l~~~~~~~~y~~l~ 664 (1350)
|++.|+|+||+++ ++.|++++
T Consensus 689 i~~~G~~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 689 VVQRGTHEELWAV--GGAYARLI 709 (710)
T ss_pred EEEecCHHHHHHc--CCcHHHHh
Confidence 9999999999987 78898876
No 25
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-86 Score=735.78 Aligned_cols=548 Identities=27% Similarity=0.381 Sum_probs=467.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 112 FVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQ-EVLKYAFYFLVV--GAAIWASSWAEISCWMWTGERQSIKMRIKYLE 188 (1350)
Q Consensus 112 ~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~ 188 (1350)
.+.-+.....|.+.+.++|.+... ..+.. .++.+.++.++- +.+..+++-++.++|..+.+-..+++-..+|+
T Consensus 225 ~i~rli~~~~pi~~k~iv~~ltap----~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfr 300 (790)
T KOG0056|consen 225 IIGRLINVSLPILSKWIVDELTAP----DTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFR 300 (790)
T ss_pred HHHHHHhhhhHHhHHHHHHhhcCc----chhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHH
Confidence 333344445566677888876531 11111 111122111111 22235667778888888888889999999999
Q ss_pred HHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHH
Q 000689 189 AALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF-SAVWQLALVTLAVVPLIAVIGAI 267 (1350)
Q Consensus 189 ~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~lv~l~~~pl~~~~~~~ 267 (1350)
|+..+++.|+-++ ++|+++.-+...++.+. ++...+.++...+.-+.++++..+ ..+|++++++++++.++......
T Consensus 301 Hlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~ 378 (790)
T KOG0056|consen 301 HLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIK 378 (790)
T ss_pred HHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeee
Confidence 9999999999988 99999998887777765 555555555555555555554443 46899999999999888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 268 HATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYA 347 (1350)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (1350)
+..+..+..+++..+..+..+...+++-|.+|||-||+|+++.++|.+.+.++.+..+|......+.......+..++.+
T Consensus 379 iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll 458 (790)
T KOG0056|consen 379 ITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLL 458 (790)
T ss_pred eehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHh
Confidence 77777788888888888888889999999999999999999999999999999999988877666665555555555555
Q ss_pred HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcce
Q 000689 348 LLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGL 427 (1350)
Q Consensus 348 ~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~ 427 (1350)
..-.+.+|+|..+.+++|+.+.+..|++...+|++.....+..+++..+-++++++++++++|+.+.+ ...+....+|.
T Consensus 459 ~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~pl~~~~G~ 537 (790)
T KOG0056|consen 459 AGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPPLKVTQGK 537 (790)
T ss_pred hhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCCccccCCe
Confidence 55556677888899999999999999999999999999999999999999999999999988875432 33344556799
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+|+||+|.|. |++|+|+||||+++||+++|+|||||+||||++++|.|||+.++|.|.|||+||++....++|++||
T Consensus 538 i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IG 615 (790)
T KOG0056|consen 538 IEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIG 615 (790)
T ss_pred EEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcC
Confidence 99999999997 4578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
+||||..||++||..||.||+|.+++||+.+|++.|++||.|.++|+||+|.|||+|-.||||||||+||||+++++|.|
T Consensus 616 VVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~i 695 (790)
T KOG0056|consen 616 VVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSI 695 (790)
T ss_pred cccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHH
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
++|||+|||||..||+.||.+|.++.++||.|+|+|||+|+-+||.|+|+++|+|+|.|+|+||+.+ ++|.|++||+.|
T Consensus 696 IlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~r-dgG~Ya~MWq~q 774 (790)
T KOG0056|consen 696 ILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKR-DGGAYADMWQAQ 774 (790)
T ss_pred EEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhc-cCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 489999999876
Q ss_pred HH
Q 000689 668 EA 669 (1350)
Q Consensus 668 ~~ 669 (1350)
..
T Consensus 775 qa 776 (790)
T KOG0056|consen 775 QA 776 (790)
T ss_pred Hh
Confidence 54
No 26
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=8.3e-83 Score=819.61 Aligned_cols=557 Identities=26% Similarity=0.357 Sum_probs=492.6
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++++++++++ .+...++++++..++....|++++.++|.+.... +. ..+..+.+.++++.++..++.++
T Consensus 133 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~-~~----~~l~~~~~~~~~~~~~~~~~~~~ 206 (694)
T TIGR03375 133 RPKHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQ-AF----ETLWVLAIGVALAIVFDFVLKTL 206 (694)
T ss_pred ccchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-cH----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777766543 3444555555666666667777888898765321 11 11222333333444556678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1350)
+.++..+.+.++..++|..+|+|++++|+.| +++ ++|++++|+ +|++.+++++...+...+.++..+++.+++++++
T Consensus 207 ~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 283 (694)
T TIGR03375 207 RSYFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAII 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 666 899999999 7999999999888888888888888888899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000689 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|.+++++++.+|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+
T Consensus 284 ~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR03375 284 GGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLK 363 (694)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
..........+..++..++.++++++|++++.+|.+|.|.+++++.+......|+..+...+..++.++.+.+|+.++++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~ 443 (694)
T TIGR03375 364 SRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQ 443 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 98888888888888888888889999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000689 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+.. ......+...+.|+|+||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+
T Consensus 444 ~~~e~~~~-~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~ 521 (694)
T TIGR03375 444 LPVERPEG-TRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGS 521 (694)
T ss_pred CCCCCCCC-CCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 87653221 1111122345789999999999743 357999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCC
Q 000689 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 566 (1350)
|.+||+|+++++.+++|++|+||+|+|++|++||+|||.+++|++++++++++++.+++++++.++|+||||.+||+|.+
T Consensus 522 I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~ 601 (694)
T TIGR03375 522 VLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRS 601 (694)
T ss_pred EEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
|||||||||+|||||+++|+|||||||||+||+++|+.+++.|.++.+++|+|+||||+++++.||+|++|++|+|+|.|
T Consensus 602 LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G 681 (694)
T TIGR03375 602 LSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADG 681 (694)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ChHHHHhc
Q 000689 647 THDELIAK 654 (1350)
Q Consensus 647 ~~~~l~~~ 654 (1350)
+|+||+++
T Consensus 682 ~~~eLl~~ 689 (694)
T TIGR03375 682 PKDQVLEA 689 (694)
T ss_pred CHHHHHHH
Confidence 99999875
No 27
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.5e-82 Score=814.11 Aligned_cols=553 Identities=25% Similarity=0.329 Sum_probs=487.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 754 PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTK 833 (1350)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1350)
+.+..+...++++++..++....++++..+++....... ......+.+.++++.++..++.+++.++...++.++..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (686)
T TIGR03797 133 GARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDA 209 (686)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555666666666666677777765542211 11223344455666677788899999999999999999
Q ss_pred HHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 834 RVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFP 913 (1350)
Q Consensus 834 ~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~p 913 (1350)
++|..+|+++++.|+.||++ +++|++++|+. |++.+++.+...+...+.+.+.+++.++++++++|++++++++++|
T Consensus 210 ~l~~~~~~~ll~~~~~~~~~--~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 286 (686)
T TIGR03797 210 SLQAAVWDRLLRLPVSFFRQ--YSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALAL 286 (686)
T ss_pred HHHHHHHHHHHcCCHHHHCC--CChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 78999999997 8999999999888888888888888889999999999999999988
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000689 914 VVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQ 993 (1350)
Q Consensus 914 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1350)
+.++..++..+..+...++..+..++..+++.|+++|+++||+++.|+.+.++|.+..++..+...+..........+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (686)
T TIGR03797 287 VAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNA 366 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777777777777788888888899999999999999999999999999999999988888888888777777778
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC
Q 000689 994 FCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT 1073 (1350)
Q Consensus 994 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~ 1073 (1350)
++..+..++.+|+|++++..|.+++|.++++..+......++..+.....++..+..+.+|+.++++.+++.++..
T Consensus 367 ~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~---- 442 (686)
T TIGR03797 367 VLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK---- 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc----
Confidence 8888889999999999999999999999998888888889999999999999999999999999998765532211
Q ss_pred CCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC
Q 000689 1074 PVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN 1153 (1350)
Q Consensus 1074 ~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~ 1153 (1350)
..+....|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1112345789999999999743 357999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
.+++|++|+||||||.+|+|||||||.++++ ++|+++++|++.++++++|+++|+||||.+||+|.+|||||||||+||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999988 999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDG 1313 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g 1313 (1350)
||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|+|+|++|+++ +|
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~--~~ 676 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR--EG 676 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC--Cc
Confidence 9999999999999999999999999999999886 6899999999999999999999999999999999999987 89
Q ss_pred hhHHHHHHh
Q 000689 1314 CYARMIQLQ 1322 (1350)
Q Consensus 1314 ~y~~l~~~q 1322 (1350)
.|++|++.|
T Consensus 677 ~y~~l~~~q 685 (686)
T TIGR03797 677 LFAQLARRQ 685 (686)
T ss_pred HHHHHHHhc
Confidence 999999865
No 28
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.1e-82 Score=814.06 Aligned_cols=563 Identities=23% Similarity=0.376 Sum_probs=492.8
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++.+.++.+..+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555556666666666666666777777777776543221 11222333444555666778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l 904 (1350)
.+++.++..++|.++|+++++.|+.||++ +++|++++|++ |.+.+.+.+...+...+.+++.+++.++++++++|++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~--~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFST--RRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 99999999999999999999999999985 78999999998 9999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|++++..++..+..++..++..+..++..+.+.|+++|+++||+++.|+.+.++|.+......+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888887777778878888888889999999999999999999999999999999988888887777777
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000689 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~ 1064 (1350)
.+....+..++..+..++++|+|++++..|.+++|.++++.........++..+......+..+..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77666777777778888999999999999999999999988888888899999999999999999999999999987665
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEE
Q 000689 1065 IEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMI 1144 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1144 (1350)
.+.... . ...+...|.|+|+||+|+|++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++
T Consensus 458 ~~~~~~-~-~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~i 533 (708)
T TIGR01193 458 FINKKK-R-TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 (708)
T ss_pred cccccc-c-cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEE
Confidence 432211 0 111234678999999999974 347999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccC-CCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1145 DGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYG-HESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1145 DG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~-~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
||+|+++++.+++|++|+||||||.||+|||||||.++ .++++|+++++|++.++++++|.++|+||||.+||+|.+||
T Consensus 534 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LS 613 (708)
T TIGR01193 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSIS 613 (708)
T ss_pred CCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999998 57899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||||||+||||++++|+|||||||||+||++||+.|++.|++. +|+|+|+||||+++++.||+|+||++|+++|.|+|
T Consensus 614 gGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~ 692 (708)
T TIGR01193 614 GGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSH 692 (708)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999975 78999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHH
Q 000689 1304 SHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~ 1320 (1350)
++|+++ +|.|++|++
T Consensus 693 ~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 693 DELLDR--NGFYASLIH 707 (708)
T ss_pred HHHHhc--CCcHHHHhh
Confidence 999987 799999986
No 29
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.7e-81 Score=792.48 Aligned_cols=566 Identities=32% Similarity=0.488 Sum_probs=496.3
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++.++++.+++++. +++.+++.++..++....+.+++.++|...... . .. .+..+.+.+++++++..++.++..
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~-~~---~~~~~~~~~~~~~l~~~~~~~~~~ 86 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKA-D-RS---VLKWMPLVVIGLMILRGITSFISS 86 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-c-hh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777666444 344445555555555566667777887654311 1 11 111122223334555667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
++..+.+.++..++|..+|+++++.|.++|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (582)
T PRK11176 87 YCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSW 165 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999988 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++++|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..
T Consensus 166 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (582)
T PRK11176 166 QLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMV 245 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
....+...+..++..+..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+++++.+.+|+.++++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~ 325 (582)
T PRK11176 246 SASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLE 325 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888777788888788888899999999999999999998888777788899999999999999999999999999865
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+. .....++..+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 326 ~~~~~---~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 326 QEKDE---GKRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred CcCCC---CCcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 54221 111122334679999999999753 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCC-CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD-ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~-~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 567 (1350)
+||+|+++++.+++|++|+||||||++|++||+|||.+|+++ .++++++++++.+++++++.+||+|+||.+|++|.+|
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 999999999999999999999999999999999999999764 7899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+|+|.|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHH
Q 000689 648 HDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~~~~ 667 (1350)
|++|+++ ++.|+++++.|
T Consensus 562 ~~~l~~~--~~~y~~l~~~~ 579 (582)
T PRK11176 562 HAELLAQ--NGVYAQLHKMQ 579 (582)
T ss_pred HHHHHhC--CChHHHHHHHH
Confidence 9999987 78999998765
No 30
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.5e-81 Score=785.20 Aligned_cols=565 Identities=22% Similarity=0.313 Sum_probs=480.4
Q ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 747 RLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHA-YMIREIAKYCYLLIGLSSAELLFNTLQHSFWD 825 (1350)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 825 (1350)
+++++.++.++.+.++++++++..++....+++++.+++........ ........+...+++++++..++.++..++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666666777777776666666667777776644211110 00001111223344556667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 826 IVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLA 905 (1350)
Q Consensus 826 ~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~ 905 (1350)
.++.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|+++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLAR--YRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhcc--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 906 LVLIAVFPVVVAA-TVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 906 lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
+++++++|+.+++ .++..+..+...++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+....
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888876543 355556666667777888888999999999999999999999999999999999988888888888
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000689 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV-SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~ 1063 (1350)
.+....+.+++..+..++++|+|.+++ .|.++.+.+++++.+... ...++..+......+.++..+++|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 877777788888888888899999884 788888887765544433 234555566677888899999999999998766
Q ss_pred cCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000689 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.+..... . +....+.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|+
T Consensus 323 ~~~~~~~~--~-~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~ 398 (574)
T PRK11160 323 EVTFPTTS--T-AAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEIL 398 (574)
T ss_pred CCCCCccc--C-CCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 53211111 1 11235789999999999753 24799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||+||++||+|||.+++++++|+++++|++.+++++++++ |+||||.+||+|.+||
T Consensus 399 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LS 477 (574)
T PRK11160 399 LNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLS 477 (574)
T ss_pred ECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCC
Confidence 999999999999999999999999999999999999999988999999999999999999999 9999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
||||||+|||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 478 gGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~ 557 (574)
T PRK11160 478 GGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTH 557 (574)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHH
Q 000689 1304 SHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~ 1321 (1350)
+||+++ +|.|++||+.
T Consensus 558 ~~l~~~--~g~y~~l~~~ 573 (574)
T PRK11160 558 QELLAQ--QGRYYQLKQR 573 (574)
T ss_pred HHHHhc--CcHHHHHHhh
Confidence 999988 8999999863
No 31
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-84 Score=722.40 Aligned_cols=505 Identities=30% Similarity=0.432 Sum_probs=429.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 813 ELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLV 892 (1350)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~ 892 (1350)
+.+++.++.+++..+.+-.++.+.-++|+|+.+.++.|+-. ..+|+++.-+.+..+.+. ++......+...+.-+.+
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~--rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLN--RRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeec--ccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 46778888999999999999999999999999999999864 568988877777666665 444433333333333333
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHH
Q 000689 893 ACTAG-FVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNL 971 (1350)
Q Consensus 893 ~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~ 971 (1350)
+++.. ..++||.+++++.+..+.........-+..+++|++.....+..+...+++-+.+|||-|++|++..++|.+.+
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 33332 34689999888877766655544444444455666766777778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 972 QTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRA 1051 (1350)
Q Consensus 972 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 1051 (1350)
.+..+...+...-..+.......+..+...+...+.++++..+..++|+.+....+++...+|+--+..+...+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99887665544444444444444555555555666667777888999998888888888888888888888899999999
Q ss_pred HHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHH
Q 000689 1052 MRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALV 1131 (1350)
Q Consensus 1052 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL 1131 (1350)
++++++++++++|..+. ++.++-...+|.|+|+||+|.|. |++|||+||||++.||++||+|||||+||||++++|
T Consensus 509 mEnmfdllkee~eVvd~--P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlL 584 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDL--PGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLL 584 (790)
T ss_pred HHHHHHHhhcCchhhcC--CCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHH
Confidence 99999999887776422 12222123679999999999996 567999999999999999999999999999999999
Q ss_pred hccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCc
Q 000689 1132 QRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGY 1211 (1350)
Q Consensus 1132 ~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gl 1211 (1350)
+||||.++|.|.|||+||+++..++||++||+||||.+||+.||..||.|++|++++||+++|++.|++||-|.++|+||
T Consensus 585 fRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY 664 (790)
T KOG0056|consen 585 FRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGY 664 (790)
T ss_pred HHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEE
Q 000689 1212 KTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAV 1291 (1350)
Q Consensus 1212 dt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~V 1291 (1350)
+|.|||+|-.||||||||+||||++|++|.|++||||||+||..||+.||.+|.+.+.+||.|+||||||||.+||.|+|
T Consensus 665 ~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILv 744 (790)
T KOG0056|consen 665 NTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILV 744 (790)
T ss_pred hhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEecChhHHhhcCCCchhHHHHHHhhhc
Q 000689 1292 IDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1292 l~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+++|+|+|.|+|+||+++ ++|.|++||+.|+..
T Consensus 745 i~~G~IvErG~HeeLl~r-dgG~Ya~MWq~qqa~ 777 (790)
T KOG0056|consen 745 ISNGRIVERGRHEELLKR-DGGAYADMWQAQQAM 777 (790)
T ss_pred EeCCeEeecCcHHHHHhc-cCCcHHHHHHHHHhc
Confidence 999999999999999998 599999999987654
No 32
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.8e-81 Score=801.71 Aligned_cols=568 Identities=28% Similarity=0.397 Sum_probs=501.7
Q ss_pred chHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWA 166 (1350)
Q Consensus 87 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (1350)
..+++++++++++++ .+...++++++..++....|++++.++|.+.... +. ..+..+++.++++.++.+++.++
T Consensus 125 ~~~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~-~~----~~l~~l~~~~~~~~~~~~~~~~l 198 (694)
T TIGR01846 125 FGFSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHR-GL----STLSVLALAMLAVAIFEPALGGL 198 (694)
T ss_pred CcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-Ch----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777766543 3344455555555556666777888998765321 11 12222333444455556778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 167 EISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSA 246 (1350)
Q Consensus 167 ~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1350)
+.++....+.++..++|.++|+|++++|+.||++. ++|++++|+ +|++.+++++...+..++.++..+++.+++++++
T Consensus 199 ~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 276 (694)
T TIGR01846 199 RTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFY 276 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998 999999999 6999999999888888887777777778899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Q 000689 247 VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYK 326 (1350)
Q Consensus 247 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~ 326 (1350)
+|.+++++++.+|+++++..++.++.++..++..+..++.++.+.|.++|+++||+||.|+.+.++|++..++..+...+
T Consensus 277 ~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 356 (694)
T TIGR01846 277 SPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFR 356 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888898888888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000689 327 SGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIID 406 (1350)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~ 406 (1350)
.....+....+..++..+..++++|+|++++.+|.+|.|.++++..+......|+..+...+..+++++.+.+|+.++++
T Consensus 357 ~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 436 (694)
T TIGR01846 357 VTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILN 436 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 88888888888888888888899999999999999999999999888888888999999999999999999999999998
Q ss_pred cCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000689 407 HKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
.+++.+.. .....+...+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+
T Consensus 437 ~~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~ 513 (694)
T TIGR01846 437 SPTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQ 513 (694)
T ss_pred CCCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 76653221 111122345789999999999743 346999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCC
Q 000689 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 566 (1350)
|++||+|+++++.+++|++|+||+|+|++|++||+|||.+++|+.++++++++++.+++++++.++|+|+||.+|++|.+
T Consensus 514 I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~ 593 (694)
T TIGR01846 514 VLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGAN 593 (694)
T ss_pred EEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCC
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|+|++.|
T Consensus 594 LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g 673 (694)
T TIGR01846 594 LSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESG 673 (694)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHHHH
Q 000689 647 THDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 647 ~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
+|+||+++ ++.|+++++.|
T Consensus 674 ~~~~l~~~--~~~y~~l~~~~ 692 (694)
T TIGR01846 674 RHEELLAL--QGLYARLWQQQ 692 (694)
T ss_pred CHHHHHHc--CChHHHHHHhh
Confidence 99999987 79999998754
No 33
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.5e-81 Score=808.73 Aligned_cols=561 Identities=24% Similarity=0.313 Sum_probs=486.3
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++.+.++.+..+...++++++..++....+++...+++........ .....+...++++.++..++.+++.++...+
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ---DWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444445555555555555566666666654322111 1122234445555666788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.++..++|.++|+++++.|++||++ +++|++++|+..| +.+++++...+..++.+++.+++.++++++++|+++++
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~--~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQ--RHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcC--CcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999986 7899999999988 68999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000689 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++.+|+.++..++..+..+...++..+...+..+.+.|+++|+++||+++.|+.+.++|.+...+..+...+.......
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887777777767667777777888899999999999999999999999999999988888887777777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000689 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~ 1067 (1350)
...+.+++..+..++++|+|++++..|.+++|.++++..+......++..+......+..+..+++|+.++++.+++.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 77778888888889999999999999999999999888888888899999999999999999999999999987665432
Q ss_pred CCC---CCCCCC-CCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000689 1068 DDP---DATPVP-DRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1068 ~~~---~~~~~~-~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
... .....+ +...|.|+|+||+|+|++. ++++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 537 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEIL 537 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 110 000111 2345789999999999853 35799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||.+|+|||||||.++.++++|+++++|++.++++++|.++|+||||.+||+|.+||
T Consensus 538 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LS 617 (710)
T TIGR03796 538 FDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLS 617 (710)
T ss_pred ECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|.|+|
T Consensus 618 GGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~ 695 (710)
T TIGR03796 618 GGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTH 695 (710)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCH
Confidence 9999999999999999999999999999999999999999987 58999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHH
Q 000689 1304 SHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~ 1319 (1350)
+||+++ +|.|++|+
T Consensus 696 ~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 696 EELWAV--GGAYARLI 709 (710)
T ss_pred HHHHHc--CCcHHHHh
Confidence 999987 89999987
No 34
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-80 Score=725.50 Aligned_cols=552 Identities=27% Similarity=0.350 Sum_probs=483.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 107 GSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKY 186 (1350)
Q Consensus 107 ~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~ 186 (1350)
..++..+.+++.....+++...++.+..... ...+..+...+++..++..++.+.+.....+.+.++...+|..+
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-----~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~ 79 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL-----FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLV 79 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555666666666543211 22333344445555556677788888888889999999999999
Q ss_pred HHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 000689 187 LEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGA 266 (1350)
Q Consensus 187 ~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~ 266 (1350)
++|+.+++..|-.+. ++|+..+.+...++.++..++..++.++...+..++.++..|+++|.-++++++++|++.+++.
T Consensus 80 l~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 80 LDKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 267 IHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSY 346 (1350)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (1350)
++++..++..+++...+..+++.+-+.++|+.|+|+|+..+...+++.+..++.++..++.-++.-+...+..++.+++.
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988887777666777788888888
Q ss_pred HHHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCc
Q 000689 347 ALLLWYGGYLVRH-HFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVS 425 (1350)
Q Consensus 347 ~~~~~~g~~lv~~-g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 425 (1350)
+++..+-+..... |.++....+.++...--.+.|+..+...++.-+.+.++.+.++.+++.+++..+............
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 7776665555566 788877777666655666789999999999999999999999999988765322111001111122
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..++++|++|.||+.+ ++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.||++
T Consensus 319 ~ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 3456669999998643 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++||+|+|+||++||||||+++++++++++++++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++||||++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~ 665 (1350)
+++|||||||+||.+||+.|++.|.++.+++|+|+||||+..+++||+|+|||+|+++|+|+|++|.++ +|.|++|+.
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l~~ 553 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANLLK 553 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988 899999998
Q ss_pred HHHH
Q 000689 666 MQEA 669 (1350)
Q Consensus 666 ~~~~ 669 (1350)
.|..
T Consensus 554 ~q~~ 557 (559)
T COG4988 554 QQEG 557 (559)
T ss_pred HHhc
Confidence 7753
No 35
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.6e-80 Score=785.76 Aligned_cols=566 Identities=26% Similarity=0.348 Sum_probs=481.4
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
+++++.|.+++++ .+++.+++.++..++.+..|.+++.++|....... .. . .....+++.++++.++.+++.+++.
T Consensus 11 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (592)
T PRK10790 11 LKRLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGN-LP-L-GLVAGLAAAYVGLQLLAAGLHYAQS 86 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc-h-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556555433 34556666677777777788889999987543211 11 1 1111122223334445566778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
+.....+.++..++|.++|+++++.|.++|++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|
T Consensus 87 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (592)
T PRK10790 87 LLFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDW 165 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999999999999998 9999999999999999999999999999999988888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.+.|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 166 ~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (592)
T PRK10790 166 RMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTL 245 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888887788888888888888888999999999999999999999999999999998888888777766
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000689 329 FAKGMG-LGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 329 ~~~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
...++. .++..++..+..++++++++. +..|.++.|.+++++.+......|+..+...+..+.+++.+++|+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~ 324 (592)
T PRK10790 246 RLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDG 324 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 655543 233333333332333333444 578999999999998888888889999999999999999999999999986
Q ss_pred CCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000689 408 KPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
+++... . .......+.|+++||+|+|++ +.++|+|+||++++||++||||+||||||||+++|+|+|+|++|+|
T Consensus 325 ~~~~~~--~--~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I 398 (592)
T PRK10790 325 PRQQYG--N--DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEI 398 (592)
T ss_pred CCccCC--C--CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceE
Confidence 543211 1 111223467999999999974 3469999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCC
Q 000689 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 567 (1350)
.+||.|+++++.+++|++|+||||||++|++||+|||++|+ ++++++++++++.+++++++.++|+||||.+|++|.+|
T Consensus 399 ~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~L 477 (592)
T PRK10790 399 RLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNL 477 (592)
T ss_pred EECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 99999999999999999999999999999999999999998 68899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+
T Consensus 478 SGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~ 557 (592)
T PRK10790 478 SVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGT 557 (592)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHHH
Q 000689 648 HDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~~~~~~ 669 (1350)
|+||+++ ++.|+++++.|..
T Consensus 558 ~~~L~~~--~~~y~~l~~~~~~ 577 (592)
T PRK10790 558 HQQLLAA--QGRYWQMYQLQLA 577 (592)
T ss_pred HHHHHhC--CCHHHHHHHHHhh
Confidence 9999987 7999999987654
No 36
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-81 Score=716.25 Aligned_cols=571 Identities=27% Similarity=0.357 Sum_probs=477.2
Q ss_pred hHHHHHHhhchhhHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDYV----LMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
..+.+..|.++.... .++.++++.+.+.......|.+++.++|........+ .........+..+.+..+...++
T Consensus 12 ~~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~-a~~~~~~~~~~~y~iar~~s~~F 90 (591)
T KOG0057|consen 12 ILRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNP-AVLSTITALLAGYGIARLGSSVF 90 (591)
T ss_pred HHHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCc-chhhhhhHHHHHHHHHHHHHHHH
Confidence 345555555543322 2222333333335566667778888888763111111 11111222334455666778889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG 243 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1350)
..++...+.++.+++.++.-.++|++++.++.+||.+. .+|++.+.+..-...|...+.-.+..++..++.+.......
T Consensus 91 ~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l 169 (591)
T KOG0057|consen 91 NELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGIL 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 99999999999999999998888777777766554444332
Q ss_pred -HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000689 244 -FSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQR 322 (1350)
Q Consensus 244 -~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~ 322 (1350)
.-.....+++++..+..+..+......+..++.++..++.+.+.+.+-|.+.|..+||+||.|+++.++|...+.++.+
T Consensus 170 ~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~ 249 (591)
T KOG0057|consen 170 YYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYER 249 (591)
T ss_pred HHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 3345666777777766777667777777778888889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 323 LGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIF 402 (1350)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~ 402 (1350)
.+.+.....++.......+.....+.+.+.|..-+.+|.+|.|+++........+..|+..+...+..+.++..-++-++
T Consensus 250 ~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~ 329 (591)
T KOG0057|consen 250 AGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLF 329 (591)
T ss_pred hhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 98888777777666666666666777777888888899999999998877777788899999999999998888888777
Q ss_pred HHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000689 403 RIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP 482 (1350)
Q Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 482 (1350)
...+....+. +...+....++.|+|+||+|+|+ +++++|+++||+|++||+|||||+|||||||++++|+||++
T Consensus 330 ~l~~~~~~i~---~~~~~i~~~~~~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d- 403 (591)
T KOG0057|consen 330 ILLEVDEDIQ---EAALPIELFGGSIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD- 403 (591)
T ss_pred hhhhhhhhhh---hccCCcccCCCcEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-
Confidence 6654332221 11123334567899999999997 44569999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcC
Q 000689 483 TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRE 562 (1350)
Q Consensus 483 ~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~ 562 (1350)
++|+|+|||+|+++++++++|+.|||||||..||++||.+||.||+|.++++++.++||.+++||-+++||+||+|.|||
T Consensus 404 ~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 404 YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000689 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 642 (1350)
+|..|||||||||+||||+++||||+++|||||+||.+||+.+.+.+.+...+||+|+|+||++++++||+|++|++|++
T Consensus 484 rG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v 563 (591)
T KOG0057|consen 484 RGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTV 563 (591)
T ss_pred cccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCee
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEecChHHHHhccCCcHHHHHHHHHH
Q 000689 643 SEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 643 ~~~g~~~~l~~~~~~~~y~~l~~~~~ 668 (1350)
.|.|+|+||++. .+.|+++|..|.
T Consensus 564 ~e~gth~ell~~--s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 564 KEYGTHSELLAP--SELYADLWTTQT 587 (591)
T ss_pred EEeccHHHHhhh--hhHHHHHhcccc
Confidence 999999999995 899999997654
No 37
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.3e-81 Score=853.67 Aligned_cols=568 Identities=20% Similarity=0.251 Sum_probs=469.4
Q ss_pred cchHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
.+.+..++.|++...+...++.+++.++..++..+.+++++.+.+........ ... ..+..++++++++..++.+
T Consensus 949 ~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~-~~~----~~~~~iy~~l~i~~~~~~~ 1023 (1522)
T TIGR00957 949 QVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQ-NNT----SLRLSVYGALGILQGFAVF 1023 (1522)
T ss_pred cccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC-CCc----chHHHHHHHHHHHHHHHHH
Confidence 45677777777654333322333333333344445566777776532110000 100 1122344455666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
+..+++.+.+.+...++|.++|++++++|++|||++ ++|++++|+++|++.+++.+...+..++..++.+++.++++++
T Consensus 1024 ~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~ 1102 (1522)
T TIGR00957 1024 GYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILL 1102 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788888899999999999999999999999999998 9999999999999999999999999999999999999999888
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
.+|.+++++++++++++++..++.+..++..+......+.+.+++.|+++|+++||+|++|+.+.+++.+..+...+..+
T Consensus 1103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~ 1182 (1522)
T TIGR00957 1103 ATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYY 1182 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88887777776666666667777777777777778888899999999999999999999999999999988888877766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVR-HHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRI 404 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~ 404 (1350)
.......+......++.. ++++++|+..+. .|.++.|.+.+++.+......++..+...+..++.+++|++|+.++
T Consensus 1183 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~ 1259 (1522)
T TIGR00957 1183 PSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEY 1259 (1522)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655555444443333322 233444555554 5789999998888888888889999999999999999999999999
Q ss_pred HccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 000689 405 IDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP 482 (1350)
Q Consensus 405 l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~ 482 (1350)
++.++|.+...+...+++ +.+|.|+|+||+|+|+++. .++|+|+||+|++||++||||+||||||||+++|+|+|+|
T Consensus 1260 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1260 SETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred hcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 987665321111111111 3468899999999997542 3699999999999999999999999999999999999999
Q ss_pred CCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcC
Q 000689 483 TSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRE 562 (1350)
Q Consensus 483 ~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~ 562 (1350)
++|+|.|||+|+++++.+++|++|++|||||.||+|||||||.... +++++++++|++.+++++++.++|+||||.+||
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e 1417 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAE 1417 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecC
Confidence 9999999999999999999999999999999999999999998433 588999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000689 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 642 (1350)
+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|
T Consensus 1418 ~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~I 1497 (1522)
T TIGR00957 1418 GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEV 1497 (1522)
T ss_pred CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred EEecChHHHHhccCCcHHHHHHHH
Q 000689 643 SEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 643 ~~~g~~~~l~~~~~~~~y~~l~~~ 666 (1350)
+|.|+|+||+++ ++.|+++++.
T Consensus 1498 vE~G~~~eLl~~--~~~f~~l~~~ 1519 (1522)
T TIGR00957 1498 AEFGAPSNLLQQ--RGIFYSMAKD 1519 (1522)
T ss_pred EEECCHHHHHhC--CCHHHHHHHH
Confidence 999999999987 6999999864
No 38
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2e-80 Score=797.47 Aligned_cols=553 Identities=24% Similarity=0.366 Sum_probs=482.6
Q ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 750 KMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGE 829 (1350)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 829 (1350)
.+.++.+..+...++++++..++....++++..+++........ .....+...++++.++..++.+++.++..+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 140 STLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455455555555555555666666666666654322111 112223334445556677888999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 830 NLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLI 909 (1350)
Q Consensus 830 ~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l 909 (1350)
++..++|..+|+++++.|++| + .+++|++++|+ +|++.+++.+...+...+..++.+++.++++++++|+++++++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 999999999999999999998 4 36899999999 8999999999988888888888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000689 910 AVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGY 989 (1350)
Q Consensus 910 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 989 (1350)
+++|+.++..++..+..+...++..+..++..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+.........
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877777777777888888888999999999999999999999999999999999998888888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCC
Q 000689 990 GVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDD 1069 (1350)
Q Consensus 990 ~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~ 1069 (1350)
.+.+.+..+..++.+|+|++++.+|.+++|.++++..+......++..+.....++..+..+.+|+.++++.+++.++..
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 452 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT 452 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 78888888888999999999999999999999998888888889999999999999999999999999998776533211
Q ss_pred CCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccC
Q 000689 1070 PDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDI 1149 (1350)
Q Consensus 1070 ~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di 1149 (1350)
. ....+...|.|+|+||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+
T Consensus 453 ~--~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 453 R--FLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred C--CCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1 11112345789999999999753 34799999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1150 RKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1150 ~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++++++++|++|+||||||++|+|||||||.+++++++++|+++|++.++++++|.++|+||||.+||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999998899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|+|+|+||+++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999976
Q ss_pred CCC
Q 000689 1310 NPD 1312 (1350)
Q Consensus 1310 ~~~ 1312 (1350)
.+.
T Consensus 690 ~~~ 692 (694)
T TIGR03375 690 LRK 692 (694)
T ss_pred hhc
Confidence 333
No 39
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.7e-81 Score=847.22 Aligned_cols=644 Identities=17% Similarity=0.207 Sum_probs=466.5
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCCCC-------Cchhhhhccch---hhhhhccc-------CC
Q 000689 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYANP-------SPQAQAQETTT---TTKRQMEN-------NS 67 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---~~~~~~~~-------~~ 67 (1350)
+|++++++.+ |.| +|++|++++.|++.++.+....+... +.+..+...+. ........ ..
T Consensus 797 TH~l~~l~~a--D~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1622)
T PLN03130 797 TNQLHFLSQV--DRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSSKPVANGNANNLKKD 874 (1622)
T ss_pred ECCHhHHHhC--CEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccccccccccccccccc
Confidence 6999999998 999 99999999999987765433211100 00000000000 00000000 00
Q ss_pred CCCCCCCC-----CCCCCCCCCccchHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhH
Q 000689 68 SSSSSAAN-----SEPKKPSDVTPVGLGELFRFADSLDY-VLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDK 141 (1350)
Q Consensus 68 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~ 141 (1350)
........ ...++......+.+..+..|++.... ..+++.+++.++..++....+++++.+.|..... ...
T Consensus 875 ~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~-- 951 (1622)
T PLN03130 875 SSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK-THG-- 951 (1622)
T ss_pred ccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-CCc--
Confidence 00000000 00011112334567778888654322 1222222333333333334455666666642211 110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHH
Q 000689 142 MMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDA 221 (1350)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~ 221 (1350)
...+.+++++++++..++.+++.+++.+.+.+...++|.++|++++++|++|||++ ++|++++|+++|++.+++.
T Consensus 952 ----~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~ 1026 (1622)
T PLN03130 952 ----PLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRN 1026 (1622)
T ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHH
Confidence 11233445556666777888888888999999999999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHH
Q 000689 222 ISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAV-IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVV 300 (1350)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~v 300 (1350)
+...+..++..++.+++.++++++++|. .++++++++++++ +..++.+..++..+......+...+++.|+++|++||
T Consensus 1027 l~~~~~~~~~~~~~~i~~~i~i~~~~~~-~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tI 1105 (1622)
T PLN03130 1027 VAVFVNMFLGQIFQLLSTFVLIGIVSTI-SLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTI 1105 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHH
Confidence 9999999999999988888888888873 3333333333222 2333445555555556666788899999999999999
Q ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------cCHHHHHHHH
Q 000689 301 FAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHF---------TNGGLAIATM 371 (1350)
Q Consensus 301 k~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~---------~~~g~~~~~~ 371 (1350)
|+|++++++.+.+.+..+...+..+.......+......+ +..+++++.|...+..+. .+.|.+++
T Consensus 1106 raf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~---~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls-- 1180 (1622)
T PLN03130 1106 RAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLET---LGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLS-- 1180 (1622)
T ss_pred HhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHcccccccchhhhHHHHHHHH--
Confidence 9999998777766666555444333222222222111111 122222233333344321 12232232
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccce
Q 000689 372 FAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNF 449 (1350)
Q Consensus 372 ~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i 449 (1350)
+.+....++..+...+..++.+..|.+|+.++++.++|.+...+...+++ +.+|.|+|+||+|+|++. .++||+|+
T Consensus 1181 -~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~i 1258 (1622)
T PLN03130 1181 -YALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGL 1258 (1622)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecce
Confidence 33334445666667778889999999999999987765422111111111 346889999999999642 24699999
Q ss_pred EEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCC
Q 000689 450 SLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRP 529 (1350)
Q Consensus 450 ~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~ 529 (1350)
||+|++||++||||+||||||||+++|+|+|+|++|+|.|||+|+++++++++|++|++|||||.||+|||||||.++.
T Consensus 1259 s~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~- 1337 (1622)
T PLN03130 1259 SFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN- 1337 (1622)
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHH
Q 000689 530 DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEAL 609 (1350)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l 609 (1350)
+++++++++|++.++++++|.++|+||||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|+++|
T Consensus 1338 ~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I 1417 (1622)
T PLN03130 1338 EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI 1417 (1622)
T ss_pred CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000689 610 DRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 610 ~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~ 669 (1350)
++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||++++ ++.|++|++....
T Consensus 1418 ~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~-~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1418 REEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNE-GSAFSKMVQSTGA 1476 (1622)
T ss_pred HHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCC-CCHHHHHHHHcCh
Confidence 9998999999999999999999999999999999999999999863 5899999876543
No 40
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.3e-80 Score=719.98 Aligned_cols=551 Identities=26% Similarity=0.362 Sum_probs=488.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 763 SVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAA 842 (1350)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 842 (1350)
.+++.+.+++....+++++..+........ ......+...++++.++..++.+.+......++.++...+|+.++++
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666666667777777766554321 22344455666677777888888999999999999999999999999
Q ss_pred HHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 843 VLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQ 922 (1350)
Q Consensus 843 ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~ 922 (1350)
+.+.+..|-.+ .++|+....+...++.++.++...++.+..+.+..++.++.+++++|.-+++++.++|++.++.++.
T Consensus 83 l~~~gp~~~~~--~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 83 LAKLGPAFIAQ--KPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred HHhCChhhhcC--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999876 7899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000689 923 KMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYAL 1002 (1350)
Q Consensus 923 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1002 (1350)
....+..+++.-..+...+.++.+.+.|+.|+|+|+..+...++..+...+..+..+..-++.-....+..++.++..++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888899999999999999999999999999999888888888887777777777777788888888888
Q ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCC
Q 000689 1003 GLWYSSWLVKH-GISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRG 1081 (1350)
Q Consensus 1003 ~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g 1081 (1350)
+..|.+..... |.+++...+.+++..--.+.|+.++...++.-..+..+.+.++.+++.+.+..+..... ........
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~-~~~~~~~~ 319 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKA-EVANEPPI 319 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccc-ccccCCCc
Confidence 87777766666 88888877777777777788999999999999999888999999888776543322110 11112234
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
+|+++|++|+||+.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.++||+++
T Consensus 320 ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 566779999998653 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCC
Q 000689 1162 AIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAE 1241 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ 1241 (1350)
++|||+|++|+|||||||.+++++++|+|++++++.+++.+|+.. |+|+||++||+|.+|||||+||+++|||++++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1242 IMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1242 ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
++|||||||+||.+||+.|++.|.++.+++|||+||||+..+++||+|+|||+||++|+|+|++|+++ +|.|++|+..
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l~~~ 554 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANLLKQ 554 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988 8999999998
Q ss_pred hhh
Q 000689 1322 QRF 1324 (1350)
Q Consensus 1322 q~~ 1324 (1350)
|+.
T Consensus 555 q~~ 557 (559)
T COG4988 555 QEG 557 (559)
T ss_pred Hhc
Confidence 754
No 41
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.9e-80 Score=779.98 Aligned_cols=567 Identities=23% Similarity=0.334 Sum_probs=478.0
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
++++..+..+.+..+.+.+++.++..++....++++..+++.......... .....+.++++++.++..++.+++.++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 11 LKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666666666777777777777778888888776543211111 1111223334555556777888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l 904 (1350)
..++.+...++|.++|+++++.|.+||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|++
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 167 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFDT--QPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRM 167 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999985 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++...+.....+...++..+...+...++.|++.|+++||+|+.++.+.++|.+..+...+...+....
T Consensus 168 ~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (592)
T PRK10790 168 ALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRL 247 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888777776666667667777777788889999999999999999999999999998888777666555554
Q ss_pred Hhhh-HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000689 985 AGSG-YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 985 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~ 1063 (1350)
.+.. ..+..++..+...+..++++. +..|.++++.++.+..+......++..+......+.++..+++|+.++++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 326 (592)
T PRK10790 248 DGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPR 326 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4432 222333332222222223333 57899999998888888888888999999999999999999999999987654
Q ss_pred cCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000689 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.... . .. +...+.|+|+||+|+||+ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 327 ~~~~~--~--~~-~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 327 QQYGN--D--DR-PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred ccCCC--C--cc-CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 32111 1 11 123468999999999974 34799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||.+|+|||||||.+++ +++|++++++++.++++++|.++|+||||.+||+|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999997 689999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||||||||||||+++|+|||||||||+||++||+.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHHhhhc
Q 000689 1304 SHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+||+++ ++.|++|++.|...
T Consensus 559 ~~L~~~--~~~y~~l~~~~~~~ 578 (592)
T PRK10790 559 QQLLAA--QGRYWQMYQLQLAG 578 (592)
T ss_pred HHHHhC--CCHHHHHHHHHhhh
Confidence 999988 79999999987554
No 42
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.5e-80 Score=778.16 Aligned_cols=565 Identities=34% Similarity=0.509 Sum_probs=506.4
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 90 GELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEIS 169 (1350)
Q Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1350)
+.++++.++++ ..++++++++++.+++.+..|++++.++|....... . ..+..++..++++.++.+++.++..+
T Consensus 3 ~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~~~i~~~~~~~~~~~ 76 (571)
T TIGR02203 3 RRLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD--R---SVLWWVPLVVIGLAVLRGICSFVSTY 76 (571)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc--h---hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666553 456677777888888888888888888886443211 1 11222333344555566778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000689 170 CWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQ 249 (1350)
Q Consensus 170 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (1350)
+..+.+.++..++|..+|+++++.|.++|++. ++|++++|+++|++.+++++...+..++.++..+++.++++++++|.
T Consensus 77 ~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~ 155 (571)
T TIGR02203 77 LLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQ 155 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999988 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 250 LALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGF 329 (1350)
Q Consensus 250 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~ 329 (1350)
+++++++.+|+.+++..++.++.++...+.++..++..+.+.|.++|+++||+++.|+.+.++|++..++..+...+...
T Consensus 156 l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (571)
T TIGR02203 156 LTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTS 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000689 330 AKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKP 409 (1350)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 409 (1350)
..+....+..++.++..++++++|++++.+|.+|.|.+++++.++.....|+..+...+..+++++.+.+|+.++++.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 315 (571)
T TIGR02203 236 AGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPP 315 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888888899999999999999999999999998888889999999999999999999999999998765
Q ss_pred CCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 000689 410 SIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLL 489 (1350)
Q Consensus 410 ~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i 489 (1350)
+.+.. .....+..+.|+++||+|+|+++ +.++|+|+||++++||+++|+|+||||||||+++|+|+|+|++|+|++
T Consensus 316 ~~~~~---~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i 391 (571)
T TIGR02203 316 EKDTG---TRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILL 391 (571)
T ss_pred CCCCC---CCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEE
Confidence 53211 11112234679999999999754 357999999999999999999999999999999999999999999999
Q ss_pred CCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCC-CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 490 DGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRP-DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 490 ~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~-~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
||+++++++.+++|++|+||||+|++|++||+|||.++++ +.++++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 392 ~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LS 471 (571)
T TIGR02203 392 DGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLS 471 (571)
T ss_pred CCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCC
Confidence 9999999999999999999999999999999999999986 789999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 472 gGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~ 551 (571)
T TIGR02203 472 GGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTH 551 (571)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000689 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~y~~l~~~~ 667 (1350)
++++++ ++.|+++++.+
T Consensus 552 ~~l~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 552 NELLAR--NGLYAQLHNMQ 568 (571)
T ss_pred HHHHHc--CCHHHHHHHHh
Confidence 999987 68999887654
No 43
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=8.5e-80 Score=778.83 Aligned_cols=563 Identities=29% Similarity=0.475 Sum_probs=484.6
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 749 AKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVG 828 (1350)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (1350)
+++.++.++.++..+++.++..+.....++++..+++........ .....+...++++.++..++.+++.++..+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444444444444445555555555544322111 11112223344466667788888888999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 829 ENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVL 908 (1350)
Q Consensus 829 ~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~ 908 (1350)
.+....+|..+|+++++.|..+|++ ...|++++|+++|++.+...+...+..++..++.+++.++++++++|++++++
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 171 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDK--QSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLIL 171 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCC--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000689 909 IAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSG 988 (1350)
Q Consensus 909 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1350)
++++|+.++.........+...++.++...+...++.|.++|+++||+|+.++.+.++|.+..+...+...+........
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T PRK11176 172 IVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSIS 251 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887777777777777777777888888999999999999999999999999999999999888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000689 989 YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPD 1068 (1350)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~ 1068 (1350)
..+..++..+...+++++|++++..|.++++.++.++.+......++..+......+.++..+.+|+.++++.+++.+..
T Consensus 252 ~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~ 331 (582)
T PRK11176 252 DPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG 331 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC
Confidence 77777777788888899999999999999999988888888888899999999999999999999999998765442211
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc
Q 000689 1069 DPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD 1148 (1350)
Q Consensus 1069 ~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~d 1148 (1350)
.. . .++..+.|+|+||+|+|+++ +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|
T Consensus 332 ~~---~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~ 406 (582)
T PRK11176 332 KR---V-IERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHD 406 (582)
T ss_pred Cc---C-CCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEE
Confidence 11 1 12234679999999999754 3579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCC-CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1149 IRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1149 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
+++++.+++|++|+||||||++|+|||||||.+++++ ++|++++++++.++++++++++|+||||.+||+|.+||||||
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqr 486 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQR 486 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHH
Confidence 9999999999999999999999999999999998754 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHh
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|||+|||||+++|+|||||||||+||++||+.+.++|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|+
T Consensus 487 QRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~ 566 (582)
T PRK11176 487 QRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELL 566 (582)
T ss_pred HHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcCCCchhHHHHHHhh
Q 000689 1308 KNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~~q~ 1323 (1350)
++ ++.|++|++.|.
T Consensus 567 ~~--~~~y~~l~~~~~ 580 (582)
T PRK11176 567 AQ--NGVYAQLHKMQF 580 (582)
T ss_pred hC--CChHHHHHHHHh
Confidence 88 799999998763
No 44
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-79 Score=770.12 Aligned_cols=564 Identities=27% Similarity=0.353 Sum_probs=489.8
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++++++|++++++ .++++++++++..++.+..|++++.++|.+... . . . . .+.+.+++++++.++..++..
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~--~-~---~-~~~~~~~~~~~~~~~~~~~~~ 77 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSK-S--D-V---L-PTLALWAGFGVFNTIAYVLVA 77 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--c-H---H-HHHHHHHHHHHHHHHHHHHHH
Confidence 5677888777644 455677777777888888888999999976432 1 1 1 0 111111222233344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
++......++..++|.++|+|++++|++||+++ ++|++++|+++|++.+++.+.+.+..++..++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 156 (585)
T TIGR01192 78 READRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDW 156 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666666777799999999999999988 9999999999999999999988888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 157 ~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (585)
T TIGR01192 157 RLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVL 236 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888889999999999999999999999999999999999999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...++...+..++..+..++++++|++++.+|.++.|.+++++.+......|+.++...+..+..++.+.+|+.++++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~ 316 (585)
T TIGR01192 237 DWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSV 316 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777777777777778888899999999999999999999888888888899999999999999999999999999875
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.++. ......+...+.|+++||+|+|++. .++|+|+||++++||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 317 ~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 393 (585)
T TIGR01192 317 FQREEP-ADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQIL 393 (585)
T ss_pred ccccCC-ccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEE
Confidence 543211 1111112234679999999999742 3689999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
+||.++++++.+++|++++||+|+|++|++|++|||.++.+++++++++++++.+++++++.++|+|++|.+|++|.+||
T Consensus 394 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LS 473 (585)
T TIGR01192 394 IDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLS 473 (585)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++++..||+|++|++|++++.|+|
T Consensus 474 gGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 474 GGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000689 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~y~~l~~~~ 667 (1350)
++++++ ++.|+++++.+
T Consensus 554 ~~l~~~--~~~y~~l~~~~ 570 (585)
T TIGR01192 554 QELIQK--DGRFYKLLRRS 570 (585)
T ss_pred HHHHHC--CChHHHHHHhC
Confidence 999987 79999998765
No 45
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.8e-80 Score=770.99 Aligned_cols=526 Identities=24% Similarity=0.277 Sum_probs=452.6
Q ss_pred HHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 90 GELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEIS 169 (1350)
Q Consensus 90 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (1350)
+++++|.+++++ .+++++++.++..++....|++++.++|...... . .. ........++++.++..++.++..+
T Consensus 2 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~---~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (529)
T TIGR02868 2 LRILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEMP---P-VL-YLSVAAVAVRAFGIGRAVFRYLERL 75 (529)
T ss_pred hhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---h-hH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677766644 3455566666666666677778888888654211 1 11 0111111122234455677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000689 170 CWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQ 249 (1350)
Q Consensus 170 ~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (1350)
+..+.+.++..++|.++|+|++++|.+||++. ++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 76 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (529)
T TIGR02868 76 VGHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVP 154 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88899999999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 250 LALVTLAVVPLIAVIGAIHA-TSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 250 l~lv~l~~~pl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
+++++++.+|++.++...+. +..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|++..++..+...+..
T Consensus 155 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (529)
T TIGR02868 155 AALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAA 234 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888766654444 44456667778888999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
...+...++..++..+..++++|+|++++.+|.++.|.+++++++......|+..+...+..+++++++.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (529)
T TIGR02868 235 RATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAK 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888888888888888888899999999999999999999988888888889899999999999999999999999876
Q ss_pred CCCCCCCCC-CccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000689 409 PSIDRNSES-GLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 409 ~~~~~~~~~-~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
++.+..... .....+..+.|+|+||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I 392 (529)
T TIGR02868 315 GPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEV 392 (529)
T ss_pred CCcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 543211110 11111234679999999999753 369999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCC
Q 000689 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 567 (1350)
.+||+|++++ .+++|++|+||||+|+||++||+|||++|+|++++++++++++.+++++++.+||+||||.+||+|.+|
T Consensus 393 ~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 471 (529)
T TIGR02868 393 TLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARL 471 (529)
T ss_pred EECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcC
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRL 625 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l 625 (1350)
||||||||+||||++++|+|||||||||+||+++|+.|++.+.++.+++|+|+||||+
T Consensus 472 SGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 472 SGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999999988899999999996
No 46
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5e-79 Score=770.84 Aligned_cols=566 Identities=27% Similarity=0.382 Sum_probs=486.4
Q ss_pred hHHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAE 167 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (1350)
.++++++++++++ ..+.+.++++++..++.+..|++++.++|.+... . .. ..+.+.+++++++..+..++.
T Consensus 6 ~~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~ 76 (588)
T PRK13657 6 LYARVLQYLGAEK-RLGILLAVANVLLAAATFAEPILFGRIIDAISGK-G---DI----FPLLAAWAGFGLFNIIAGVLV 76 (588)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c---cH----HHHHHHHHHHHHHHHHHHHHH
Confidence 3566777766553 3445566666666677777788889999876432 1 11 111122222223333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 168 ISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAV 247 (1350)
Q Consensus 168 ~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (1350)
..+..+...++..++|.++|+|++++|..+|++. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++
T Consensus 77 ~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (588)
T PRK13657 77 ARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMN 155 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555566666677799999999999999988 999999999999999998888888888888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000689 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|.+++++++++|+.+++..++.++.++..++.++..++.++.+.|.+.|+++||.|+.++.+.++|.+..++..+...+.
T Consensus 156 ~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (588)
T PRK13657 156 WRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPV 235 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888889999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000689 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
....++...+..++..+..++++++|++++.+|.+++|.+++++.++.....|+..+...+..+..++.+.+|+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~ 315 (588)
T PRK13657 236 LSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDA 315 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77777777777777778888889999999999999999999988888888889999999999999999999999999987
Q ss_pred CCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEE
Q 000689 408 KPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQV 487 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i 487 (1350)
+++.+.. ......+...+.|+++||+|+|+++ +++|+|+||++++||+++|||+||||||||+++|+|+|+|++|+|
T Consensus 316 ~~~~~~~-~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I 392 (588)
T PRK13657 316 VPDVRDP-PGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRI 392 (588)
T ss_pred CcccCCC-CCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE
Confidence 5542211 1111112234579999999999742 369999999999999999999999999999999999999999999
Q ss_pred EECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCC
Q 000689 488 LLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 488 ~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 567 (1350)
.+||.|+++++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 393 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~L 472 (588)
T PRK13657 393 LIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQL 472 (588)
T ss_pred EECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|++++.|+
T Consensus 473 SgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~ 552 (588)
T PRK13657 473 SGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGS 552 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998878999999999999999999999999999999999
Q ss_pred hHHHHhccCCcHHHHHHHHHH
Q 000689 648 HDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~~~~~ 668 (1350)
|++|+++ ++.|++++..+.
T Consensus 553 ~~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 553 FDELVAR--GGRFAALLRAQG 571 (588)
T ss_pred HHHHHHC--CChHHHHHHHhh
Confidence 9999987 789999987654
No 47
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.6e-79 Score=785.14 Aligned_cols=557 Identities=27% Similarity=0.407 Sum_probs=488.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 754 PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTK 833 (1350)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1350)
+.+..+...++++++..++....++++..+++....... ......+...++++.++..++.+++.++...++.++..
T Consensus 136 ~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 212 (694)
T TIGR01846 136 RYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDV 212 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444555555555566666666665542211 11223344455566667788899999999999999999
Q ss_pred HHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 834 RVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFP 913 (1350)
Q Consensus 834 ~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~p 913 (1350)
++|.++|+++++.|+.||++ +++|++++|+ +|++.+++++...+..++.+++.+++.++++++++|++++++++++|
T Consensus 213 ~l~~~~~~~l~~l~~~~f~~--~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~ 289 (694)
T TIGR01846 213 ELGARLYRHLLGLPLGYFES--RRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLV 289 (694)
T ss_pred HHHHHHHHHHHcCCHHHcCC--CCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 7899999999 69999999998888888888888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 000689 914 VVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQ 993 (1350)
Q Consensus 914 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 993 (1350)
++++..++.....++..++..+..++..+.+.|+++|+++||++|.|+.+.++|.+..++..+...+..........+.+
T Consensus 290 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR01846 290 CYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIE 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887777766666667777777888899999999999999999999999999999999988888888888777777788
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCC
Q 000689 994 FCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDAT 1073 (1350)
Q Consensus 994 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~ 1073 (1350)
++..+..++.+|+|++++..|.+++|.++++..+......++..+......+.++..+++|+.++++.+++.+.. ..
T Consensus 370 ~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~--~~- 446 (694)
T TIGR01846 370 LIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA--GL- 446 (694)
T ss_pred HHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC--CC-
Confidence 888888899999999999999999999998888888888999999999999999999999999999876653321 11
Q ss_pred CCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC
Q 000689 1074 PVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN 1153 (1350)
Q Consensus 1074 ~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~ 1153 (1350)
...+...|.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++||+|+++++
T Consensus 447 ~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~ 525 (694)
T TIGR01846 447 AALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIAD 525 (694)
T ss_pred CCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCC
Confidence 1112345789999999999754 346999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
.+++|++|+||||||.+|++||||||.+++++++++++++|++.+++++++.++|+||||.++++|.+||||||||++||
T Consensus 526 ~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lA 605 (694)
T TIGR01846 526 PAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIA 605 (694)
T ss_pred HHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDG 1313 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g 1313 (1350)
||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|++|+++ +|
T Consensus 606 Rall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~--~~ 683 (694)
T TIGR01846 606 RALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL--QG 683 (694)
T ss_pred HHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc--CC
Confidence 9999999999999999999999999999999998889999999999999999999999999999999999999987 79
Q ss_pred hhHHHHHHh
Q 000689 1314 CYARMIQLQ 1322 (1350)
Q Consensus 1314 ~y~~l~~~q 1322 (1350)
.|++|++.|
T Consensus 684 ~y~~l~~~~ 692 (694)
T TIGR01846 684 LYARLWQQQ 692 (694)
T ss_pred hHHHHHHhh
Confidence 999999865
No 48
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.3e-79 Score=766.34 Aligned_cols=541 Identities=26% Similarity=0.387 Sum_probs=475.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh
Q 000689 118 FPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQY 197 (1350)
Q Consensus 118 ~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~ 197 (1350)
..+.|++++.++|.+.....+. ..+..+...++++.++.+++.++..++....+.++..++|.++|+|++++|.+|
T Consensus 11 ~~~~p~~~~~iid~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~ 86 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHMTT----GQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEF 86 (569)
T ss_pred HHHHHHHHHHHHHHhccCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 3445556788888654321111 112223333333444556677787888888999999999999999999999999
Q ss_pred HhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 198 FDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG-FSAVWQLALVTLAVVPLIAVIGAIHATSLAKLA 276 (1350)
Q Consensus 198 fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~ 276 (1350)
|++. ++|++++|+++|++.++..+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.++.++..
T Consensus 87 ~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~ 165 (569)
T PRK10789 87 YLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERF 165 (569)
T ss_pred HcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988 99999999999999999888888888888776666666555 589999999999999999999888999999989
Q ss_pred HHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 277 GKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYL 356 (1350)
Q Consensus 277 ~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 356 (1350)
++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+...++...+..++.++++++|+++
T Consensus 166 ~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l 245 (569)
T PRK10789 166 KLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM 245 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988888888887777777777777778888999999
Q ss_pred HHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEE
Q 000689 357 VRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFS 436 (1350)
Q Consensus 357 v~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~ 436 (1350)
+.+|.+|.|.+++++.+......|+..+...+..+.+++++.+|+.++++.+++.+. .....+...+.|+++||+|+
T Consensus 246 v~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 246 VVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD---GSEPVPEGRGELDVNIRQFT 322 (569)
T ss_pred HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC---CCCCCCCCCCcEEEEEEEEE
Confidence 999999999999998888888889999999999999999999999999987654321 11112223467999999999
Q ss_pred CCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcc
Q 000689 437 YPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALF 516 (1350)
Q Consensus 437 y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf 516 (1350)
|+.. +.++|+|+||++++|++++|+||||||||||+++|+|+|+|++|+|.+||+++.+++.+++|++|+||+|+|++|
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 346999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCC
Q 000689 517 ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSA 596 (1350)
Q Consensus 517 ~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~ 596 (1350)
++|++|||+++.++.++++++++++.+++++++.++|+|++|.+|++|.+|||||||||+||||++++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000689 597 LDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 597 lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~ 669 (1350)
||+++++.+.+.|+++.+++|+|+||||+++++.||+|++|++|++++.|+|++++++ ++.|+++++.|..
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~~ 552 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQL 552 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhhh
Confidence 9999999999999998889999999999999999999999999999999999999987 7899999987643
No 49
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.8e-78 Score=766.44 Aligned_cols=570 Identities=35% Similarity=0.520 Sum_probs=495.9
Q ss_pred HHHHHHhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 89 LGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEI 168 (1350)
Q Consensus 89 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (1350)
++.+++|.+++++ .+.+.+++.++.+++....|++++.++|...... +.. .+..+..+++++.++..++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKD-SSG----LLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc-cHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777665543 3455666667777777778888899998743211 111 111222223333444556677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVW 248 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (1350)
++..+++.++..++|..+|++++++|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 888899999999999999999999999999988 8999999999999999999988888989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 249 QLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 249 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
.+++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988888889999999999999999999999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
........+..++.++..++++++|++++.+|.++.|.+++++.+......|+..++..+..+.+++.+.+|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 77666666666666677778889999999999999999999888888888899999999999999999999999999876
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+..........+..+.|+++||+|+|+++.++++|+|+||+++|||+++|+|+||||||||+++|+|+|+|++|+|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 54221111111111234579999999999854335799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
+||.++++++.+++|++|+||||+|++|++||+|||.+|+|+.++++++++++.+++++++.++|+|++|.+|++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||||+||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.++.||+|++|++|++++.|+|
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred HHHHhccCCcHHHHHHHHH
Q 000689 649 DELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 649 ~~l~~~~~~~~y~~l~~~~ 667 (1350)
++++++ ++.|+++++.|
T Consensus 559 ~~l~~~--~~~~~~l~~~~ 575 (576)
T TIGR02204 559 AELIAK--GGLYARLARLQ 575 (576)
T ss_pred HHHHHc--CChHHHHHhhc
Confidence 999987 78999988654
No 50
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-79 Score=702.76 Aligned_cols=544 Identities=27% Similarity=0.411 Sum_probs=442.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Q 000689 770 GSLNAFFAYVLSAIMSVYYNPDH-AYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEI 848 (1350)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 848 (1350)
.......+.++...++.....+. ..........+..|..+.+...+|+.++.+.|.++.+++.+..-.+.|.+++..+.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44455555666555554421111 11122233445677888888999999999999999999999999999999999999
Q ss_pred cccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 849 AWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTA-GFVLQWRLALVLIAVFPVVVAATVLQKMFMK 927 (1350)
Q Consensus 849 ~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~-~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~ 927 (1350)
+||-. ..+|.+.+.+.+-...+...+...+..++..++.+...... ..-+++..+++.+..+.....+.+....+..
T Consensus 123 ~~~~~--~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFLS--RGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred HhhcC--CCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99975 56899998888888888877777666666665544444322 2334555555555555455444455555556
Q ss_pred hHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000689 928 GFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYS 1007 (1350)
Q Consensus 928 ~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1007 (1350)
.++++...+...+...+.+++.|.++||+||-|++..++|...+....+.........++..-....+.....+.+.+.+
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778888889999999999999999999999999999999999888777666655555444333344445556666666
Q ss_pred HHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEE
Q 000689 1008 SWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKH 1087 (1350)
Q Consensus 1008 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~n 1087 (1350)
..-+..|..+++.++.+...+.....++..+.....++.++..-+..++...+....+.. ...+....+|.|+|+|
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~----~~~~i~~~~~~I~F~d 356 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE----AALPIELFGGSIEFDD 356 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh----ccCCcccCCCcEEEEe
Confidence 666777888999888777777777777777777777777777766666654432222111 1112223567899999
Q ss_pred EEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccC
Q 000689 1088 VDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQE 1167 (1350)
Q Consensus 1088 Vsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQd 1167 (1350)
|+|.|+ |+++||+++||+|++||+|||||+|||||||++++|+||+| ++|+|+|||+||++++++++|+.|||||||
T Consensus 357 V~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd 433 (591)
T KOG0057|consen 357 VHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQD 433 (591)
T ss_pred eEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCc
Confidence 999997 44569999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred CccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000689 1168 PCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDE 1247 (1350)
Q Consensus 1168 p~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDE 1247 (1350)
.+||++||.+||.||++++++||+.++||++++||.|+++|+||+|.|||+|..||||||||++||||+|++|||+++||
T Consensus 434 ~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 434 SVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred ccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhh
Q 000689 1248 ATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1248 aTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
|||+||.+||+.|.+++.....|||+|+|+||++++++||+|+||++|+|+|+|+|+||++. .+.|+++|..|..
T Consensus 514 aTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~--s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 514 ATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP--SELYADLWTTQTS 588 (591)
T ss_pred cccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh--hhHHHHHhccccc
Confidence 99999999999999999998899999999999999999999999999999999999999985 8999999987643
No 51
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-79 Score=835.11 Aligned_cols=647 Identities=16% Similarity=0.199 Sum_probs=466.6
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCCCC----C---chhhhhc-cchhhhh--hc----ccCCCCC
Q 000689 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYANP----S---PQAQAQE-TTTTTKR--QM----ENNSSSS 70 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~-~~~~~~~--~~----~~~~~~~ 70 (1350)
+|++++++.+ |.| +|++|++++.|+++++.+....+.+. . .+..+.+ .+...+. .. ++.....
T Consensus 797 TH~~~~l~~a--D~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1495)
T PLN03232 797 TNQLHFLPLM--DRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVTIDVSERNLGS 874 (1495)
T ss_pred ECChhhHHhC--CEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccccccccccccc
Confidence 6999999998 998 99999999999987765433222110 0 0000000 0000000 00 0000000
Q ss_pred C--CCCC---CCCCCCCCCccchHHHHHHhhchhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHH
Q 000689 71 S--SAAN---SEPKKPSDVTPVGLGELFRFADSLDY-VLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQ 144 (1350)
Q Consensus 71 ~--~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~ 144 (1350)
. .... ...+++.....+.+..+++|++...+ ..+++.+++.++..++.....++++.+.+..... ...
T Consensus 875 ~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~----- 948 (1495)
T PLN03232 875 TKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPK-SYS----- 948 (1495)
T ss_pred ccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CCC-----
Confidence 0 0000 00111122345677788888765322 2222222222222233333334555444321100 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHH
Q 000689 145 EVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISE 224 (1350)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~ 224 (1350)
...+..++++++++..++.+++.+++.+.+.+...++|.+++++++++|++|||++ ++|++++|+++|++.+++.+..
T Consensus 949 -~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~ 1026 (1495)
T PLN03232 949 -PGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVAN 1026 (1495)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHH
Confidence 11234445566666777888888888999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHh
Q 000689 225 KLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVI-GAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAF 303 (1350)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f 303 (1350)
.+..++..++.++++++++++++|.. +++++++++++++ ..++.+..++..+......+...+.+.|+++|+++||+|
T Consensus 1027 ~~~~~~~~~~~~i~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf 1105 (1495)
T PLN03232 1027 LMNMFMNQLWQLLSTFALIGTVSTIS-LWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAY 1105 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcC
Confidence 99999998888888888887777533 3333333332222 223334445566666777788999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccC----HHHHHH-HHHHHHHH
Q 000689 304 VGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRH-HFTN----GGLAIA-TMFAVMIG 377 (1350)
Q Consensus 304 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~-g~~~----~g~~~~-~~~~~~~~ 377 (1350)
++++++.+++.+..+...+..+.......+..... ..+..+++++.|...+.. +.+. .+..++ ++.+....
T Consensus 1106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 1182 (1495)
T PLN03232 1106 KAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRL---ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNI 1182 (1495)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHH
Confidence 99998777776666655544433222222111111 112222222333334432 3221 122222 23344445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEEeC
Q 000689 378 GLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPA 455 (1350)
Q Consensus 378 ~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~ 455 (1350)
..++..+...+..++.+..|.+|+.++++.++|.+...+...+++ +..|.|+|+||+|+|+.+ .+++|+|+||+|++
T Consensus 1183 ~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~ 1261 (1495)
T PLN03232 1183 TTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSP 1261 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcC
Confidence 557778888889999999999999999987765422111111111 345789999999999632 24799999999999
Q ss_pred CCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHH
Q 000689 456 GKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNE 535 (1350)
Q Consensus 456 g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~ 535 (1350)
||++||||+||||||||+++|+|+|+|++|+|.|||+|+++++.+++|++|+||||||.||+|||||||.+++ ++++++
T Consensus 1262 GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdee 1340 (1495)
T PLN03232 1262 SEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDAD 1340 (1495)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999986 589999
Q ss_pred HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCC
Q 000689 536 IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIG 615 (1350)
Q Consensus 536 ~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~ 615 (1350)
+++|++.+++++++.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..++
T Consensus 1341 i~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~ 1420 (1495)
T PLN03232 1341 LWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKS 1420 (1495)
T ss_pred HHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred CeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHH
Q 000689 616 RTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEA 669 (1350)
Q Consensus 616 ~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~ 669 (1350)
+|+|+||||++++.+||+|+||++|+|+|.|+|+||++++ ++.|++|++.+..
T Consensus 1421 ~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~-~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1421 CTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRD-TSAFFRMVHSTGP 1473 (1495)
T ss_pred CEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCC-CCHHHHHHHHhCh
Confidence 9999999999999999999999999999999999999872 4689999976543
No 52
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-80 Score=791.17 Aligned_cols=649 Identities=20% Similarity=0.254 Sum_probs=507.0
Q ss_pred ccchhhhhccccccc-cccCCeeecCCCCCCCCCCCCCCCCC---Cchhhhhccch-hhhh----------hcccCCCCC
Q 000689 6 SHQQEIKKIEQWRWS-EMQGLELVSSPPFNNHNNSNNNYANP---SPQAQAQETTT-TTKR----------QMENNSSSS 70 (1350)
Q Consensus 6 ~h~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~----------~~~~~~~~~ 70 (1350)
.||++|++++ |.| +|++|+|++.|+|.|+.+.+..+.+. +..+.+.+.+. ..+. ..+......
T Consensus 700 THql~~L~~a--d~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1381)
T KOG0054|consen 700 THQLQFLPHA--DQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEEASEKDLESGESSRESESRSLESLSSEE 777 (1381)
T ss_pred eCchhhhhhC--CEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccccccccccccccccchhhhhhhhhcccc
Confidence 5999999999 999 99999999999999998765443321 11010100000 0000 000000000
Q ss_pred CCCCCCC-------CCCCCCCccchHHHHHHhhch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHH
Q 000689 71 SSAANSE-------PKKPSDVTPVGLGELFRFADS-LDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKM 142 (1350)
Q Consensus 71 ~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~ 142 (1350)
+.....+ .+++.+...+.+..+..|++. ..+...++.+++.++...+.....+|+..+.+.-.......
T Consensus 778 ~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~--- 854 (1381)
T KOG0054|consen 778 EKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT--- 854 (1381)
T ss_pred cccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC---
Confidence 0000000 011224567888889999876 33333333334444444455555567777766421111000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHH
Q 000689 143 MQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAI 222 (1350)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~ 222 (1350)
.....+..++.+++++..++.+++.+.+...+.+.+++|+.++++++++.|++|||++ ++|+|+||+++|++.+++.+
T Consensus 855 -~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~L 932 (1381)
T KOG0054|consen 855 -VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLL 932 (1381)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhh
Confidence 0112345556667777788888899999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHH
Q 000689 223 SEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFA 302 (1350)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~ 302 (1350)
+..+..++..++.+++.++++.+..|++.++++.+..+++++..++.+..+++.+......+...+++.|++.|+.|||+
T Consensus 933 p~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRA 1012 (1381)
T KOG0054|consen 933 PFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRA 1012 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeee
Confidence 99999999999999999999999999988888888888888888888888888888888899999999999999999999
Q ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Q 000689 303 FVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALA 382 (1350)
Q Consensus 303 f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~ 382 (1350)
|+.|+++.+++....+.+.+..+.......+..--..++..+.......+.. +...+..++|.+--.+.+.+.....+.
T Consensus 1013 f~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~v-l~~~~~~~~g~vGLslsyal~lt~~l~ 1091 (1381)
T KOG0054|consen 1013 FGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAV-LLPSGLISPGLVGLSLSYALQLTGLLQ 1091 (1381)
T ss_pred ccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HccCCCCCcchHHHHHHHHHHHHHHHH
Confidence 9999999999999999888876655444333333333333222222111111 111222556665555566666666788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCC--CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEE
Q 000689 383 QAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELD--SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIA 460 (1350)
Q Consensus 383 ~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~--~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 460 (1350)
.+......+...+.|.|||.++.+.++|.+...+...+++ +.+|.|+|+|++.+|... ..+||+||||+|+|||+||
T Consensus 1092 ~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVG 1170 (1381)
T KOG0054|consen 1092 WLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVG 1170 (1381)
T ss_pred HHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEE
Confidence 8888899999999999999999997766211111111222 467999999999999643 3579999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHH
Q 000689 461 LVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAA 540 (1350)
Q Consensus 461 ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~ 540 (1350)
|||++|||||||+++|.|+.+|.+|+|.|||.||.++++++||++++++||||.||+||+|.|+.-.. +.+|+++|+|+
T Consensus 1171 IVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~AL 1249 (1381)
T KOG0054|consen 1171 IVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEAL 1249 (1381)
T ss_pred EeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999995432 57899999999
Q ss_pred HHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 000689 541 RVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV 620 (1350)
Q Consensus 541 ~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 620 (1350)
+.|++.+++.++|+|+|+.|.|+|.|+|-||||.+||||||+++++||+|||||+++|++|...||+.|++..+++|||.
T Consensus 1250 e~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVlt 1329 (1381)
T KOG0054|consen 1250 ERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLT 1329 (1381)
T ss_pred HHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000689 621 IAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 621 itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~ 665 (1350)
||||++|+.++|||+|||+|+|+|.|+|.+|++++ ++.|++++.
T Consensus 1330 IAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~-~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1330 IAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDK-DSLFSSLLK 1373 (1381)
T ss_pred EeeccchhhhcCeEEEeeCCeEeecCChHHHHhCC-cchHHHHHH
Confidence 99999999999999999999999999999999874 677765544
No 53
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-78 Score=823.51 Aligned_cols=507 Identities=20% Similarity=0.250 Sum_probs=425.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 158 AAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFV 237 (1350)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~ 237 (1350)
++..++.++..++....+.+...++|.++|++++++|+.|||++ ++|+++||+++|++.+++.+...+..++..++.++
T Consensus 1009 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i 1087 (1560)
T PTZ00243 1009 LLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSIC 1087 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555555566777788999999999999999999998 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHH
Q 000689 238 TGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSAL 317 (1350)
Q Consensus 238 ~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~ 317 (1350)
+.++++++.+|.+.++++.++.++..+..++.+..++..+......+.+.+.+.|+++|+++||+|++|+.+.++|.+.+
T Consensus 1088 ~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~ 1167 (1560)
T PTZ00243 1088 SSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRL 1167 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHH
Confidence 99999998888554443333333344455566666777777777888899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 318 KVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLV--RHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAK 395 (1350)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv--~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 395 (1350)
+...+..++......+......++..+..+++.++|...+ ..+.++.|.+..++.+......++..+...+..+++++
T Consensus 1168 d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~ 1247 (1560)
T PTZ00243 1168 DVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADM 1247 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877766555555555455444444444444444333 34456788776666666777778889999999999999
Q ss_pred HHHHHHHHHHccCCCCCCCC------------------------CCCc-----cCCCCcceEEEEEEEEECCCCCCCccc
Q 000689 396 VAAAKIFRIIDHKPSIDRNS------------------------ESGL-----ELDSVSGLIELKHVDFSYPSRPEVRIL 446 (1350)
Q Consensus 396 ~s~~ri~~~l~~~~~~~~~~------------------------~~~~-----~~~~~~g~i~~~~v~f~y~~~~~~~~l 446 (1350)
.+++||+++++..++.+... +... +..+..|.|+|+||+|+|++. ..++|
T Consensus 1248 ~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL 1326 (1560)
T PTZ00243 1248 NSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVL 1326 (1560)
T ss_pred HHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCcee
Confidence 99999999997543211000 0000 011235789999999999743 34699
Q ss_pred cceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhc
Q 000689 447 NNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILL 526 (1350)
Q Consensus 447 ~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~ 526 (1350)
+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++||||||||.||+|||||||..
T Consensus 1327 ~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp 1406 (1560)
T PTZ00243 1327 RGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDP 1406 (1560)
T ss_pred ecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC-CCEeEEeccCCCCCHHHHHHH
Q 000689 527 GRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN-PAILLLDEATSALDSESEKLV 605 (1350)
Q Consensus 527 g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~-~~ililDE~ts~lD~~~~~~i 605 (1350)
+. +++++++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||+++++.|
T Consensus 1407 ~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I 1485 (1560)
T PTZ00243 1407 FL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI 1485 (1560)
T ss_pred cc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH
Confidence 64 6889999999999999999999999999999999999999999999999999996 899999999999999999999
Q ss_pred HHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHH
Q 000689 606 QEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 606 ~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~ 668 (1350)
++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++. ++.|+++++.+.
T Consensus 1486 q~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~-~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1486 QATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNR-QSIFHSMVEALG 1547 (1560)
T ss_pred HHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCC-CCHHHHHHHHhC
Confidence 99999988899999999999999999999999999999999999999752 689999987654
No 54
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.1e-78 Score=762.83 Aligned_cols=563 Identities=31% Similarity=0.496 Sum_probs=503.6
Q ss_pred HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++++.++.++.++++++++++.+++.+..++++..+++....... ......+..+++++.++..++.+++.++....
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 81 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWV 81 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445556667777777788888888888888777765543221 11223334456677777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv 907 (1350)
+.++...+|..+|+++++.|.++|++ .+.|++++|+++|++.++..+...+..++.+++.+++.++++++++|+++++
T Consensus 82 ~~~~~~~lr~~l~~~~~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i 159 (571)
T TIGR02203 82 SNKVVRDIRVRMFEKLLGLPVSFFDR--QPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLI 159 (571)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999985 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000689 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
++++.|+.++..++..+..+...++..+...+..+.+.|.++|+++||+++.++.+.++|.+..+...+...+.....+.
T Consensus 160 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (571)
T TIGR02203 160 VVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSI 239 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888887778878888888899999999999999999999999999999999999988888888888887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Q 000689 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~ 1067 (1350)
...+.+++..+..++.+++|++++..|.++++.++++..+......++..+......+..++.+.+|+.++++.+++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (571)
T TIGR02203 240 SSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDT 319 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 77788888888899999999999999999999999999999999999999999999999999999999999986554321
Q ss_pred CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc
Q 000689 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~ 1147 (1350)
.. ... ....+.|+|+||+|+|+++ +.++|+|+||+|+|||+++|+|+||||||||+++|.|+|+|++|+|++||+
T Consensus 320 ~~---~~~-~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~ 394 (571)
T TIGR02203 320 GT---RAI-ERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGH 394 (571)
T ss_pred CC---CCC-CCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCE
Confidence 11 111 1235689999999999764 347999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCC-CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE-SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1148 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
|+++++.+++|++|+||||||++|+|||||||.++++ +.++++++++++.+++++++.++|+||||.+|++|.+|||||
T Consensus 395 ~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq 474 (571)
T TIGR02203 395 DLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQ 474 (571)
T ss_pred eHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHH
Confidence 9999999999999999999999999999999999986 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHH
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|||||||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|
T Consensus 475 rQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l 554 (571)
T TIGR02203 475 RQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNEL 554 (571)
T ss_pred HHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hhcCCCchhHHHHHHh
Q 000689 1307 LKNNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~~q 1322 (1350)
+++ ++.|+++++.+
T Consensus 555 ~~~--~~~~~~~~~~~ 568 (571)
T TIGR02203 555 LAR--NGLYAQLHNMQ 568 (571)
T ss_pred HHc--CCHHHHHHHHh
Confidence 987 78999998865
No 55
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.1e-77 Score=756.01 Aligned_cols=567 Identities=29% Similarity=0.403 Sum_probs=482.3
Q ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 744 SFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSF 823 (1350)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 823 (1350)
.+|++.++.++.+..+.+.++++++..++....++++..+++...... ....+.++++++.++..+..++..++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG------DIFPLLAAWAGFGLFNIIAGVLVARH 79 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666777777777777777777778877777654321 11112223333334444444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 824 WDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWR 903 (1350)
Q Consensus 824 ~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~ 903 (1350)
..+...++..+++.++|+++++.|..+|++ .+.|++++|+++|++.+...+...+..++..++.+++.++++++++|+
T Consensus 80 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 80 ADRLAHRRRLAVLTEYFERIIQLPLAWHSQ--RGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHCc--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666667779999999999999985 789999999999999999888888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 904 LALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQ 983 (1350)
Q Consensus 904 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 983 (1350)
+++++++++|+.++...+..+..+...++..+......+.+.|+++|+++||+|+.++.+.++|.+..+...+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888777766666666666677777788889999999999999999999999999999999888887777777
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000689 984 IAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKT 1063 (1350)
Q Consensus 984 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~ 1063 (1350)
.......+.+++..+...+++++|++++.+|.++++.++++..++.....++..+......+..+..+.+++.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 77767777777788888899999999999999999999988888888888888999989999999999999999887654
Q ss_pred cCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEE
Q 000689 1064 EIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1064 ~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
+.+.. ... ...+...+.|+|+||+|+||++ .++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 318 ~~~~~-~~~-~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~ 393 (588)
T PRK13657 318 DVRDP-PGA-IDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRIL 393 (588)
T ss_pred ccCCC-CCC-CCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEE
Confidence 42211 111 1111234679999999999743 3699999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1144 iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+||+|+++++.+++|++|+||||||.+|+|||||||.+++++++|++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LS 473 (588)
T PRK13657 394 IDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLS 473 (588)
T ss_pred ECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
||||||||||||++++|+|||||||||+||++||+.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|
T Consensus 474 gGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~ 553 (588)
T PRK13657 474 GGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSF 553 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHHhhh
Q 000689 1304 SHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
++|+++ ++.|++|+..+..
T Consensus 554 ~~l~~~--~~~y~~l~~~~~~ 572 (588)
T PRK13657 554 DELVAR--GGRFAALLRAQGM 572 (588)
T ss_pred HHHHHC--CChHHHHHHHhhc
Confidence 999987 7999999986643
No 56
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=6.3e-78 Score=752.61 Aligned_cols=523 Identities=22% Similarity=0.272 Sum_probs=443.4
Q ss_pred HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 750 KMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGE 829 (1350)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 829 (1350)
++.++.++.+++.++++++..++....+++++.+++.....+. ......++..++++.++..++.++..++...++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP---VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAAL 82 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555556666666666666667777777765432211 0000111112223455567778888889999999
Q ss_pred HHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 830 NLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLI 909 (1350)
Q Consensus 830 ~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l 909 (1350)
++..++|.++|+++++.|..||++ +++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++++++
T Consensus 83 ~~~~~lr~~~~~~ll~~~~~~~~~--~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l 160 (529)
T TIGR02868 83 RSLGRLRVRVYDRLARLALAGRRR--FQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLA 160 (529)
T ss_pred HHHHHHHHHHHHHhhccCcccccc--CChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999985 789999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000689 910 AVFPVVVAAT-VLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSG 988 (1350)
Q Consensus 910 ~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1350)
+.+|++.++. ++..+..+...++.++..++..+++.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02868 161 AGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLG 240 (529)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765554 444444455556667777888999999999999999999999999999999998888888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000689 989 YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPD 1068 (1350)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~ 1068 (1350)
..+..++..+..++.+|+|++++..|.++.+.++++..+......++..+......+.++..+.+|+.++++.+++.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 320 (529)
T TIGR02868 241 AAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG 320 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC
Confidence 77788888888888999999999999999998888877777777888888888889999999999999999876543221
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc
Q 000689 1069 DPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD 1148 (1350)
Q Consensus 1069 ~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~d 1148 (1350)
+.......++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++||+|
T Consensus 321 ~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~ 398 (529)
T TIGR02868 321 VVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVS 398 (529)
T ss_pred CCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEE
Confidence 111000111234679999999999754 369999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1149 IRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1149 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
++++ .+++|++|+||||||+||+|||||||.+|+++++|+++++|++.|++++||.+||+||||.+||+|.+|||||||
T Consensus 399 i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQ 477 (529)
T TIGR02868 399 VSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQ 477 (529)
T ss_pred hhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCc
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRL 1280 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRl 1280 (1350)
|||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 478 RiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 478 RLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999988999999999996
No 57
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-78 Score=687.67 Aligned_cols=504 Identities=23% Similarity=0.354 Sum_probs=425.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000689 808 GLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNT 887 (1350)
Q Consensus 808 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~ 887 (1350)
++++...+..++.....+.+..++...+|.++|+++...+..-..+ ..+|+++||+..|++.+|+.+-..+...+..+
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r--~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~ 143 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLR--YRSGDLLNRLVADVDALDNLYLRVIAPAVVAL 143 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHh--cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHH
Confidence 5566677788888888899999999999999999999888776664 67999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHH
Q 000689 888 ALMLVACTAGFVLQWRLALVLIAVF-PVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGL 966 (1350)
Q Consensus 888 ~~~i~~~~~~~~~~~~l~lv~l~~~-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 966 (1350)
...++..+..-+++|.+++.+...+ .+.++..++..++.++..++.+...+...+++.|.+.|....+.||+++.+.+.
T Consensus 144 ~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~ 223 (573)
T COG4987 144 VLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTA 223 (573)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHH
Confidence 8888777777788898887655443 445556677777888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000689 967 FSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYA-LGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETL-TLAPD 1044 (1350)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 1044 (1350)
+....+...+...+...+.+....+.+++..+..+ .++|.+. .+..|..+......+.++......+..-+. ....+
T Consensus 224 l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 224 LEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99888887777777777666665555555555554 4444443 344455443222222222222222222222 33456
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCH
Q 000689 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGK 1124 (1350)
Q Consensus 1045 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGK 1124 (1350)
..+...+++|+.++.+.+++....+ .. .+.... .++++||+|+||++ ..+||+|+||++++||+|||+|||||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~~-~~--~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGK 377 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFPD-EQ--TATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGK 377 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCCc-cc--cCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCH
Confidence 6677888999999998887765331 11 111112 79999999999875 4579999999999999999999999999
Q ss_pred HHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHH
Q 000689 1125 SSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1125 STL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I 1204 (1350)
||++++|.|-|+|++|+|.++|++++.++.+++|+.|++++|.++||++|+|+||..++|++||||+|++++++++++++
T Consensus 378 STllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~ 457 (573)
T COG4987 378 STLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLL 457 (573)
T ss_pred HHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh
Q 000689 1205 SSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1205 ~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~ 1284 (1350)
++.|+||+|.+||+|.+||||||||++|||+||+|.|++||||||.+||++||+.|.+.|.+..+|||+|+||||+..++
T Consensus 458 ~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 458 ESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred HhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1285 NAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1285 ~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
.||||+|||+|+++|+|+|.+|+++ +|.|++|++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~--~g~~~~l~q~ 572 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLAN--NGRYKRLYQL 572 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhcc--ccHHHHHhcc
Confidence 9999999999999999999999997 8999999863
No 58
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.9e-77 Score=747.19 Aligned_cols=567 Identities=26% Similarity=0.385 Sum_probs=483.9
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++++.++.+..++++++++++..++..+.++.++.+++.....+. ...+..+++++.++..+..++..++.
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666666777777777888888888888888888888876543221 01112222223334444445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l 904 (1350)
..+..++..++|.++|+++++.|++||++ +++|++++|+++|++.+...+...+..++..++.+++.+++++.++|++
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~~--~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQQ--RGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666677789999999999999986 6799999999999999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++++|+.++.........+...++..+...+..+++.|+++|+++||+|+.++.+.++|.+..+...+...+....
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988777776666666666667777788889999999999999999999999999999888877766666666
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Q 000689 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~ 1064 (1350)
.+....+..++..+..++++++|++++.+|.++++.++++..+......++..+......+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 66666666677777888889999999999999999998888888888888888888899999999999999999876544
Q ss_pred CCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEE
Q 000689 1065 IEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMI 1144 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~i 1144 (1350)
.+.... . ...+...+.|+|+||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|.|+|+|++|+|++
T Consensus 319 ~~~~~~-~-~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~ 394 (585)
T TIGR01192 319 REEPAD-A-PELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILI 394 (585)
T ss_pred ccCCcc-C-CCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEE
Confidence 321111 0 1111234679999999999743 36899999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1145 DGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1145 DG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
||+|+++++.+++|++++||||||.+|++||+|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+|||
T Consensus 395 ~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSg 474 (585)
T TIGR01192 395 DGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSG 474 (585)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChh
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~ 1304 (1350)
|||||++|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+
T Consensus 475 Gq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~ 554 (585)
T TIGR01192 475 GERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQ 554 (585)
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhhcCCCchhHHHHHHhhhc
Q 000689 1305 HLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1305 eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
+|+++ +|.|+++++.|...
T Consensus 555 ~l~~~--~~~y~~l~~~~~~~ 573 (585)
T TIGR01192 555 ELIQK--DGRFYKLLRRSGLL 573 (585)
T ss_pred HHHHC--CChHHHHHHhCccc
Confidence 99987 79999999987554
No 59
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.1e-77 Score=746.87 Aligned_cols=542 Identities=26% Similarity=0.391 Sum_probs=469.9
Q ss_pred HHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccc
Q 000689 773 NAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFD 852 (1350)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd 852 (1350)
..+.+++++.+++........ ......|..+++++.++..++.+++.++....+.+...++|.++|+++++.|++||+
T Consensus 11 ~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~ 88 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYL 88 (569)
T ss_pred HHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc
Confidence 334455666666654322111 112233444555555666777888888888999999999999999999999999998
Q ss_pred cccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhH
Q 000689 853 QEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG-FVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSG 931 (1350)
Q Consensus 853 ~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~ 931 (1350)
+ +++|++++|+++|++.++..+...+..++..++..+++++++ ++++|++++++++++|+.++......+..++..+
T Consensus 89 ~--~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~ 166 (569)
T PRK10789 89 R--HRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFK 166 (569)
T ss_pred C--CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 789999999999999999888888888877766666665555 5799999999999989888777777666666677
Q ss_pred HHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 932 DMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLV 1011 (1350)
Q Consensus 932 ~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 1011 (1350)
+.++..++..+.+.|++.|+++||+|+.++.+.++|.+..++..+...+.....+....+.+....+...+.+++|.+++
T Consensus 167 ~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv 246 (569)
T PRK10789 167 LAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMV 246 (569)
T ss_pred HHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888899999999999999999999999999999988887777777777766666667777777888899999999
Q ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEE
Q 000689 1012 KHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFS 1091 (1350)
Q Consensus 1012 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~ 1091 (1350)
..|.+++|.++++..+......++..+......+.++..+.+|+.++++.+++.+... .+. +...+.|+|+||+|+
T Consensus 247 ~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~-~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 247 VNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPV-PEGRGELDVNIRQFT 322 (569)
T ss_pred HcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCC-CCCCCcEEEEEEEEE
Confidence 9999999999888888888888998888999999999999999999998765432211 111 123568999999999
Q ss_pred CCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccC
Q 000689 1092 YPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLF 1171 (1350)
Q Consensus 1092 Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF 1171 (1350)
|+.. +.++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++||+|+++++.+++|++++||||+|++|
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 347999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCC
Q 000689 1172 ASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSA 1251 (1350)
Q Consensus 1172 ~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSa 1251 (1350)
++||||||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHHhhhc
Q 000689 1252 LDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1252 LD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
||+++++.+++.|++..+|+|+|+||||++++..||+|++|++|+++|+|+|++|+++ +|.|++|++.|+..
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~~~ 553 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQLE 553 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhhhc
Confidence 9999999999999998889999999999999999999999999999999999999987 79999999987654
No 60
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=6.4e-77 Score=743.57 Aligned_cols=525 Identities=26% Similarity=0.317 Sum_probs=460.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 104 MAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMR 183 (1350)
Q Consensus 104 ~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR 183 (1350)
+.++++++++.+++.+..|++++.++|.+.....+ ...+..+...+++++++..++.+++.++..+.+.++..++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEP----LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566667777777888888899999976311111 11222334444455566778888999999999999999999
Q ss_pred HHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000689 184 IKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAV 263 (1350)
Q Consensus 184 ~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 263 (1350)
.++|++++++|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.+++++++.+|+.++
T Consensus 81 ~~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999999988 9999999999999999999998888999998888888999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 264 IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVF 343 (1350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1350)
+..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999999888888777777666666666666
Q ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCC
Q 000689 344 CSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDS 423 (1350)
Q Consensus 344 ~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 423 (1350)
+..+++++++++.+.+|.++.|.+++++.+......|+..+...+..+++++.+++|+.++++.+++..+ .. .....
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~--~~-~~~~~ 316 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG--KA-PVTAA 316 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC--Cc-CCCCC
Confidence 6666666677777779999999999888877778889999999999999999999999999985433211 11 11111
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHh
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
..+.|+++||+|+||+. ++++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.+++|
T Consensus 317 ~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr 395 (529)
T TIGR02857 317 PAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWR 395 (529)
T ss_pred CCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHH
Confidence 23579999999999853 34799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 504 QQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
++++||+|+|++|++||+|||.++.+++++++++++++.+++++++.++|+||||.+||+|.+||||||||++||||+++
T Consensus 396 ~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~ 475 (529)
T TIGR02857 396 DQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLR 475 (529)
T ss_pred hheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999999988889999999999999999999999999999999999999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVL 637 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl 637 (1350)
+|+|||||||||+||+++++.+.+.+.++.+++|+|+||||+++++.||+|++|
T Consensus 476 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 476 DAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999988899999999999999999999986
No 61
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.4e-76 Score=749.20 Aligned_cols=566 Identities=32% Similarity=0.535 Sum_probs=488.9
Q ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 749 AKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVG 828 (1350)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 828 (1350)
+++.++.+..+.+.+++.++.+++....++.+..+++....... ......++.+++++.++..++.+++.++...++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (576)
T TIGR02204 10 WPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVTWLG 86 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555566666777777777777888877776332211 112223334445555556677788889999999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 829 ENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVL 908 (1350)
Q Consensus 829 ~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~ 908 (1350)
.++...+|..+++++++.|..+|+. ...|++++|+++|++.+++.+...+..++..++.+++.+++++.++|++++++
T Consensus 87 ~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 87 ERVVADIRRAVFAHLISLSPSFFDK--NRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHcc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999999986 67899999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000689 909 IAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSG 988 (1350)
Q Consensus 909 l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 988 (1350)
++.+|+.++..++.....+...++..+...+..+++.|.++|+++||+++.++.+.++|.+..+...+...+........
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888887777777777777777778888888999999999999999999999999999999888777766666666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCC
Q 000689 989 YGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPD 1068 (1350)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~ 1068 (1350)
..+..++.++..++.+++|++++..|.++++.++++..+......++..+.....++.++..+.+|+.++++.+++.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 56666666677788888999999999999999988888888888899999999999999999999999998866543211
Q ss_pred CCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc
Q 000689 1069 DPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD 1148 (1350)
Q Consensus 1069 ~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~d 1148 (1350)
.. ....+.+..+.|+|+||+|+||++.+.++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++||+|
T Consensus 325 ~~-~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 325 AH-PKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred CC-CccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11 11111123467999999999986443579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1149 IRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1149 i~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+++++.+++|++|+||||||.+|+|||||||.+++++.+|++++++++.+++++++.++|+|+||++|++|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999998
Q ss_pred cCCCchhHHHHHHh
Q 000689 1309 NNPDGCYARMIQLQ 1322 (1350)
Q Consensus 1309 ~~~~g~y~~l~~~q 1322 (1350)
+ ++.|++|++.|
T Consensus 564 ~--~~~~~~l~~~~ 575 (576)
T TIGR02204 564 K--GGLYARLARLQ 575 (576)
T ss_pred c--CChHHHHHhhc
Confidence 7 79999999865
No 62
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-79 Score=673.09 Aligned_cols=491 Identities=33% Similarity=0.434 Sum_probs=443.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh
Q 000689 169 SCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAV-GFSAV 247 (1350)
Q Consensus 169 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 247 (1350)
.++...++.....+--+.|.|+.++++.|+-++ .+|.+...+.....-|+..+...+...+..++-+....++ ...++
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 345667788888888899999999999999888 9999888888888888887777777777776655444444 44689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Q 000689 248 WQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKS 327 (1350)
Q Consensus 248 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~ 327 (1350)
|+.++++++++.+++++......+.....+...++.++++....+++-|..+||.|+.|+.+..+|...++.+.+...+.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999999999998888877777777778888899999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000689 328 GFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDH 407 (1350)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~ 407 (1350)
....++.......+...........++..+..|.+|.|+++..-.++.....|+..+...+..+.+++...++.+++++.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 77766666666666666677777888889999999999999888888888899999999999999999999999999998
Q ss_pred CCCCCCCCCCCccCC-CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 000689 408 KPSIDRNSESGLELD-SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQ 486 (1350)
Q Consensus 408 ~~~~~~~~~~~~~~~-~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 486 (1350)
+.++.+.+ +..+.. ...|.+.|+||+|.|. +.+++|+|+||++++|+++|+|||||+||||++++|.|||++++|.
T Consensus 243 ~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 243 EAEVSDAP-DAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred chhhccCC-CCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 87764322 222222 3467899999999997 4568999999999999999999999999999999999999999999
Q ss_pred EEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCC
Q 000689 487 VLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQ 566 (1350)
Q Consensus 487 i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~ 566 (1350)
|.+||+|+++...+++|+.||+||||..||++|+..||.||+|+++++|++.+++.+++++||..+|+||+|.|||+|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 567 LSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 567 LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
||||||||+||||+++++|+||+|||+|||||.+||+.||.+|++..+|+|+++|+|||+|+.+||.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000689 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~y~~l~~ 665 (1350)
+|+||+++ +|.|++||.
T Consensus 480 ~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA--GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc--CChHHHHhc
Confidence 99999998 899999985
No 63
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9e-79 Score=673.04 Aligned_cols=493 Identities=32% Similarity=0.434 Sum_probs=418.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000689 821 HSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVAC-TAGFV 899 (1350)
Q Consensus 821 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~-~~~~~ 899 (1350)
..+|..+++.+.+.+--+.|.|+.+.++.|.-+ ..+|.+...+.....-++..+...+...+..++-+...+ +....
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~--r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~ 80 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE--RRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRV 80 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh--cccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 345677888888899999999999999999864 345555444444444444444444444444444333333 34456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000689 900 LQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCF 979 (1350)
Q Consensus 900 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 979 (1350)
++||.+++.++++.+++++.+...-+.-.+.++...+.+.++....+++-+.+|+|.|+-|+.+..+|...++...+...
T Consensus 81 ~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~ 160 (497)
T COG5265 81 YGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAI 160 (497)
T ss_pred cccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHH
Confidence 79999999999998888888877777777888899999999999999999999999999999999999999888777665
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000689 980 WKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLL 1059 (1350)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~ 1059 (1350)
+.....++..-....+.......+...+...+..|..|.|+++..-..+.....++..+.....++.++...+++.++++
T Consensus 161 k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 161 KVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 54444443333334444455566666777778899999999887777777777777777777788899999999999998
Q ss_pred cccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc
Q 000689 1060 DRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS 1139 (1350)
Q Consensus 1060 ~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~ 1139 (1350)
+.+.+.... ++..+..+...|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|+||||+++
T Consensus 241 ~~~~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 241 DVEAEVSDA-PDAPPLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred ccchhhccC-CCCccccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 877665422 111111113468899999999996 44689999999999999999999999999999999999999999
Q ss_pred cEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCC
Q 000689 1140 GRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERG 1219 (1350)
Q Consensus 1140 G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G 1219 (1350)
|.|.|||.||+++..+++|+.||+||||.+||+.|+..|+.||+|+++++|++.|++.|++++||.++|+||||.|||+|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEE
Q 000689 1220 VQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1220 ~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE 1299 (1350)
-.||||||||+||||++|++|+||+||||||+||..||+.||.+|++..+|+|.++|||||+||.+||.|+||++|+|+|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~e 477 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVE 477 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhhcCCCchhHHHHH
Q 000689 1300 LGSHSHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1300 ~Gt~~eLl~~~~~g~y~~l~~ 1320 (1350)
.|+|+||+++ +|.|++||.
T Consensus 478 rg~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 478 RGTHEELLAA--GGLYAEMWR 496 (497)
T ss_pred cCcHHHHHHc--CChHHHHhc
Confidence 9999999998 999999996
No 64
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.9e-76 Score=670.53 Aligned_cols=503 Identities=25% Similarity=0.341 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 155 VVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLA 234 (1350)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~ 234 (1350)
.+++...+..|...+..+....++..++|.++|+++...+..-.... ++||+++|+..|++.+++.+-..+...+..+.
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~-r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~ 144 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRY-RSGDLLNRLVADVDALDNLYLRVIAPAVVALV 144 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhc-ChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHH
Confidence 34666777888888889999999999999999999999999998887 99999999999999999999888877777777
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHH
Q 000689 235 TFVTGFAVGFSAVWQLALVTLAV-VPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAY 313 (1350)
Q Consensus 235 ~~~~~~~~~~~~~~~l~lv~l~~-~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~ 313 (1350)
.+.+..+..-+++|.+++.+... +.+++++..++.+..++..++..+..+...+.+.|.+.|....+.||.++.+.+.+
T Consensus 145 ~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l 224 (573)
T COG4987 145 LIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTAL 224 (573)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHH
Confidence 76666666667889887654443 34455566777788888888888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000689 314 SSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYA-LLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAA-PSISAF 391 (1350)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~-~~~~~~ 391 (1350)
...-....+...+...+.++...+..++..+..+ +++|.++ .+..|..+......+++.++....++..+. ..+...
T Consensus 225 ~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~l 303 (573)
T COG4987 225 EATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHL 303 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHh
Confidence 9999999999999998888888777777666655 4555554 344566654333333333333333333344 556788
Q ss_pred HHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHH
Q 000689 392 AKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKST 471 (1350)
Q Consensus 392 ~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKST 471 (1350)
.+...|++|+.++++.+++...+ .+ ......+ .++++||+|+||+. +.++|+|+||++++||++||+|+|||||||
T Consensus 304 gq~~~Sa~Rl~~i~~q~~e~~~~-~~-~~~~~~~-~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKST 379 (573)
T COG4987 304 GQVIASARRLNDILDQKPEVTFP-DE-QTATTGQ-ALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKST 379 (573)
T ss_pred hHHHHHHHHHhhhccCCcccCCC-cc-ccCCccc-eeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHH
Confidence 89999999999999998876432 11 1111112 79999999999864 457999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhc
Q 000689 472 VVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIK 551 (1350)
Q Consensus 472 l~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~ 551 (1350)
|+++|.|-|+|++|+|.++|.++..++.+.+|+.|++++|.++||++|+|||+.+++|++++|+++++++.+++++++++
T Consensus 380 llqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~ 459 (573)
T COG4987 380 LLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLES 459 (573)
T ss_pred HHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhc
Q 000689 552 LPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKA 631 (1350)
Q Consensus 552 lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~ 631 (1350)
.|+||+|.+||.|..||||||||++|||+|++|+|++||||||.+||++||+.+.+.|.+..+|||+|+||||+..++.+
T Consensus 460 ~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~ 539 (573)
T COG4987 460 APDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERM 539 (573)
T ss_pred ChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000689 632 DVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 632 d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~ 665 (1350)
|+|+||++|+++|+|+|.+|+.+ +|.|+++++
T Consensus 540 drIivl~~Gkiie~G~~~~Ll~~--~g~~~~l~q 571 (573)
T COG4987 540 DRIIVLDNGKIIEEGTHAELLAN--NGRYKRLYQ 571 (573)
T ss_pred CEEEEEECCeeeecCCHHhhhcc--ccHHHHHhc
Confidence 99999999999999999999997 899998875
No 65
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-75 Score=729.90 Aligned_cols=533 Identities=25% Similarity=0.312 Sum_probs=459.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 105 AIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRI 184 (1350)
Q Consensus 105 ~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~ 184 (1350)
++.++++++..++....|++++.++|..... .+. ..+..+...++++.++..++.+++.++..+.+.++..++|.
T Consensus 9 ~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~-~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 9 IIVGLFSFVINILMLAPPLYMLQVYDRVLTS-GSV----PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-Cch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555566666677788899865421 111 12222333344444556677888888999999999999999
Q ss_pred HHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000689 185 KYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISE-KLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAV 263 (1350)
Q Consensus 185 ~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~ 263 (1350)
++|+|++++|.. ..+...+++++|++.+++.+.. .+..++..++.++ .++++++++|.+++++++.+|++++
T Consensus 84 ~~~~~ll~~~~~------~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 84 PIFAASFSATLR------RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHHHHhcCccc------CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 999999999983 2356788999999999998877 4555555555444 4567889999999999988888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 264 IGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVF 343 (1350)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1350)
+..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+.....+....+..++..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999988888888877777777777777
Q ss_pred HHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCC
Q 000689 344 CSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDS 423 (1350)
Q Consensus 344 ~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 423 (1350)
+..++++++|++++.+|.+|.|.+++++.+......|+..+...+..+++++.+.+|+.++++.+++.++ . ...+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~-~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---A-MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---C-CCCCC
Confidence 7778888999999999999999999998888888889999999999999999999999999987654321 1 11122
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHh
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
..+.|+++||+|+|++. ++++|+|+||++++||+++||||||||||||+++|+|+|+|++|+|.+||+++.+++.+++|
T Consensus 313 ~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 34679999999999743 34799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 504 QQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
++++||||+|++|++|++|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998877788999999999999999999999999999999999999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|+|||||||||+||+++++.+.+.|.++. +++|+|+||||++++..||+|++|++|++++.|+|+|++++
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999999999885 68999999999999989999999999999999999999753
No 66
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.5e-77 Score=702.14 Aligned_cols=483 Identities=31% Similarity=0.487 Sum_probs=374.5
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC----CcEEEECCeeCCCCCHHH
Q 000689 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT----SGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~i~g~~~~~~~~~~ 501 (1350)
.++++|++..|..... ..+++||||++.+||++||||.|||||||+.+.|.|+.++. +|+|.++|.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975422 35999999999999999999999999999999999999988 899999999998888765
Q ss_pred Hh----ccEEEEccCCC-cccc--cHHHHhhc----CCCCCCHHHHHHHHHHhchHHHHh--cCCCCccchhcCCCCCCC
Q 000689 502 LR----QQIGLVSQEPA-LFAT--TIKENILL----GRPDADLNEIEEAARVANAYSFII--KLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~-lf~~--ti~eNi~~----g~~~~~~~~~~~~~~~~~~~~~i~--~lp~g~~t~~~~~g~~LS 568 (1350)
+| +.|+||||+|. .+|. ||.+-|.- ... .+.++ +.+ .+.+.+. .+|+.... ...+.+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~-~~~~e---a~~--~a~elL~~Vgl~~~~~~--~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGK-GSRAE---ARK--RAVELLEQVGLPDPERR--DRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcc-ccHHH---HHH--HHHHHHHHcCCCChhhh--ccCCcccC
Confidence 43 57999999984 4443 66665542 111 11111 111 1122222 34443322 55889999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEI 645 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 645 (1350)
||||||+.||+||+.+|++||+||||++||+.+++.|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999986 58999999999999977 999999999999999
Q ss_pred cChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCccccccc
Q 000689 646 GTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLD 725 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (1350)
|+.+++++++.+.+-+.++..- +
T Consensus 237 G~~~~i~~~p~hpYT~~Ll~a~-----------------p---------------------------------------- 259 (539)
T COG1123 237 GPTEEILSNPQHPYTRGLLAAV-----------------P---------------------------------------- 259 (539)
T ss_pred cCHHHHHhccCCcccHHHHhhC-----------------C----------------------------------------
Confidence 9999998764222211111100 0
Q ss_pred CCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHH
Q 000689 726 ATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYL 805 (1350)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 (1350)
T Consensus 260 -------------------------------------------------------------------------------- 259 (539)
T COG1123 260 -------------------------------------------------------------------------------- 259 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000689 806 LIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQ 885 (1350)
Q Consensus 806 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~ 885 (1350)
..+....
T Consensus 260 --------------------------------------------~~~~~~~----------------------------- 266 (539)
T COG1123 260 --------------------------------------------RLGDEKI----------------------------- 266 (539)
T ss_pred --------------------------------------------Ccccccc-----------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHH
Q 000689 886 NTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVG 965 (1350)
Q Consensus 886 ~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 965 (1350)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 966 LFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDF 1045 (1350)
Q Consensus 966 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1045 (1350)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCC--------CCCCcccceeEEEeCCCEEEEE
Q 000689 1046 IKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSR--------PDIPIFRDLSLRARAGKTLALV 1117 (1350)
Q Consensus 1046 ~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaIV 1117 (1350)
...+.. .+ .....-++++|++.+|..+ ....+++||||+|++||++|||
T Consensus 267 -------------~~~~~~-~~---------~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglV 323 (539)
T COG1123 267 -------------IRLPRR-GP---------LRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLV 323 (539)
T ss_pred -------------cccccc-cc---------cccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEE
Confidence 000000 00 0011147899999999742 1246899999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCCCCccEEEECCcc--CCCCCHHHhhcccEEEccCCccC---cccHHHHhccCCC---CC---
Q 000689 1118 GPSGCGKSSVIALVQRFYEPSSGRVMIDGKD--IRKYNLKSLRRHMAIVPQEPCLF---ASTIYENIAYGHE---SA--- 1186 (1350)
Q Consensus 1118 G~SGSGKSTL~~lL~rl~~p~~G~I~iDG~d--i~~~~l~~lR~~i~~VpQdp~LF---~gTIreNL~~~~~---~~--- 1186 (1350)
|+||||||||.++|+|+.+|++|+|.++|.| .+.-+...+|+++-+|+|||+-. ..||+++|.-.-. ..
T Consensus 324 GeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~ 403 (539)
T COG1123 324 GESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGA 403 (539)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchH
Confidence 9999999999999999999999999999977 34334567888999999999632 3599999863211 11
Q ss_pred -CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH
Q 000689 1187 -TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALD 1265 (1350)
Q Consensus 1187 -td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~ 1265 (1350)
..+.+.+.++.+++..- .+......||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|+
T Consensus 404 ~~~~rv~~ll~~VgL~~~----------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~ 473 (539)
T COG1123 404 ERRARVAELLELVGLPPE----------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLK 473 (539)
T ss_pred HHHHHHHHHHHHcCCCHH----------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHH
Confidence 11234555666665531 2344557899999999999999999999999999999999999999999999
Q ss_pred HhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1266 RACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1266 ~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
++.+ |.|.|+|||+++.++. ||||+||.+|+|||.|+.+++++. |.-.|.+..-.
T Consensus 474 ~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~-p~h~Ytr~L~~ 531 (539)
T COG1123 474 DLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFEN-PQHPYTRKLLA 531 (539)
T ss_pred HHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcC-CCChHHHHHHH
Confidence 8764 7999999999999988 999999999999999999999987 78888887653
No 67
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.3e-75 Score=724.52 Aligned_cols=526 Identities=26% Similarity=0.339 Sum_probs=451.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 758 YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVRE 837 (1350)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 837 (1350)
.+.++++++++.+++.+..++..+++++........ ......+...++++.++..++.+++.++....+.++..++|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666777777778888888888766322111 122334555566677778888999999999999999999999
Q ss_pred HHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 838 KMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVA 917 (1350)
Q Consensus 838 ~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~ 917 (1350)
++|+++++.|..||++ +++|++++|+++|++.+++.+...+..++..++..++.+++++.++|++++++++.+|+.++
T Consensus 82 ~l~~~l~~~~~~~~~~--~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQG--RPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhcc--CChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999985 78999999999999999999999999999999898999999999999999999998888877
Q ss_pred HHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Q 000689 918 ATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLY 997 (1350)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 997 (1350)
+.+...++.+...++..+...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+..........+.+++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666777777888899999999999999999999999999998887777666666555555555555555
Q ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCC
Q 000689 998 ASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPD 1077 (1350)
Q Consensus 998 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~ 1077 (1350)
+...+...++++.+..|.++++.++.+..+......++..+......+.++..+++|+.++++.+++..+. .. .+.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~--~~--~~~ 315 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGK--AP--VTA 315 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC--cC--CCC
Confidence 55555555566666689999999888777777778888888889999999999999999999754322111 11 111
Q ss_pred CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh
Q 000689 1078 RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1078 ~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l 1157 (1350)
...+.|+|+||+|+||++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++
T Consensus 316 ~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~l 394 (529)
T TIGR02857 316 APAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSW 394 (529)
T ss_pred CCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHH
Confidence 123679999999999854 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1158 RRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
|++++||||||.+|++||||||.++.++++|++++++++.++++++++++|+||||.+||+|.+||||||||++||||++
T Consensus 395 r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~ 474 (529)
T TIGR02857 395 RDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFL 474 (529)
T ss_pred HhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEE
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVI 1292 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl 1292 (1350)
++|+|||||||||+||++|++.|++.|++..+|+|+|+||||+++++.||+|+||
T Consensus 475 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 475 RDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred cCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999999988899999999999999999999986
No 68
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.5e-73 Score=709.49 Aligned_cols=535 Identities=24% Similarity=0.340 Sum_probs=455.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 758 YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVRE 837 (1350)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 837 (1350)
.++..++++++..++..+.++.+..+++....... ......+..+++++.++..++.+++.++...++.++..++|+
T Consensus 7 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 83 (544)
T TIGR01842 7 TFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQ 83 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555566666667777777775542211 112333445555666667788889999999999999999999
Q ss_pred HHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 838 KMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGD-RIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVV 916 (1350)
Q Consensus 838 ~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~-~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~ 916 (1350)
++|+++++.|+..+ +...+++.+|++.+++.+.. .+..++..++. ++.++++++++|++++++++.+|+++
T Consensus 84 ~~~~~ll~~~~~~~-------~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 84 PIFAASFSATLRRG-------KIDGLQALRDLDQLRQFLTGPGLFAFFDAPWM-PIYLLVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHhcCcccCc-------cchHHHHHHHHHHHHHHHhhhHHHHHHHHHHH-HHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999998432 45688899999999998877 44444444444 44456788999999999888888777
Q ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 000689 917 AATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCL 996 (1350)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 996 (1350)
+..++..+..+...++.++..++..+++.|+++|+++||+|+.++.+.++|.+..++..+...+.....+....+..++.
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666777778888899999999999999999999999999999998888777777777777777777777
Q ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCC
Q 000689 997 YASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVP 1076 (1350)
Q Consensus 997 ~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~ 1076 (1350)
.+..++.+++|++++..|.++++.++++..+......++..+......+.++..+.+|+.++++.+++.++. . ..
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~-~~- 310 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---M-PL- 310 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---C-CC-
Confidence 778888899999999999999999998888888888999999999999999999999999999765543211 1 11
Q ss_pred CCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH
Q 000689 1077 DRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1077 ~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~ 1156 (1350)
+...+.|+++||+|+||+. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+.
T Consensus 311 ~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~ 389 (544)
T TIGR01842 311 PEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRET 389 (544)
T ss_pred CCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHH
Confidence 1234679999999999753 347999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000689 1157 LRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1236 (1350)
+|++++||||||.+|++|+||||.++.+++++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||+
T Consensus 390 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARal 469 (544)
T TIGR01842 390 FGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARAL 469 (544)
T ss_pred HhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999988777999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1237 Lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+++|+|||||||||+||+++++.+.+.|++.. +|+|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 470 l~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 470 YGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred hcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 99999999999999999999999999999875 68999999999999999999999999999999999999854
No 69
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3e-72 Score=701.69 Aligned_cols=535 Identities=17% Similarity=0.166 Sum_probs=444.4
Q ss_pred chHHHHHHhhc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 87 VGLGELFRFAD-SLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 87 ~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
..+++++++++ +++ ..+++++++.++.+++....|++++.+++.... .. . .. ..+++++.++.+++.+
T Consensus 3 ~~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~-~---~~----~~~~~~~~~~~~~~~~ 71 (555)
T TIGR01194 3 AAIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENF--LG-Q---GS----LFSFGGLCLLALLFRI 71 (555)
T ss_pred chHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--cc-c---hH----HHHHHHHHHHHHHHHH
Confidence 34678888887 654 445666667777777777777777777763210 00 0 01 1122333445567788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
+..++....+.++..++|.++|+|++++|++||++. ++|++++|+++|++.+++++.. +..++..++++++.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999998 9999999999999999998864 77788888888888999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHH--HHHHHHHHHHHHHHHH
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGES--KALQAYSSALKVAQRL 323 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~--~~~~~~~~~~~~~~~~ 323 (1350)
++|.+++++++++|+.+++..++.++.++...+.++..++.++.+.|.+.|+++||+|+.++ .+.++|.+..++..+.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 229 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADL 229 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999988888878788888888889999999999999999999999999954 5678888888888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 324 GYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFR 403 (1350)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~ 403 (1350)
..+.........++..++..+...+++++|++. |.++.|.+++++.+......|+..+...+..+++++++++|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ 306 (555)
T TIGR01194 230 HIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLAD 306 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776665555555555555555555556666654 78999999999988888889999999999999999999999999
Q ss_pred HHccCCCCCCC---CC-CCc---cCCCCcceEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHH
Q 000689 404 IIDHKPSIDRN---SE-SGL---ELDSVSGLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVS 474 (1350)
Q Consensus 404 ~l~~~~~~~~~---~~-~~~---~~~~~~g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ 474 (1350)
+++.+++.+.. +. ... ......+.|+++||+|+|++.+ +.++|+|+||++++||++|||||||||||||++
T Consensus 307 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ 386 (555)
T TIGR01194 307 FGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAK 386 (555)
T ss_pred HHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHH
Confidence 98632111000 00 000 1112246799999999997532 236999999999999999999999999999999
Q ss_pred HHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCC
Q 000689 475 LIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPD 554 (1350)
Q Consensus 475 ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~ 554 (1350)
+|+|+|+|++|+|.+||.++++++.+++|++++||+|||++|++|+++|+ .+++++++++++++.+++++++..+|+
T Consensus 387 ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~ 463 (555)
T TIGR01194 387 LFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDG 463 (555)
T ss_pred HHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccc
Confidence 99999999999999999999999999999999999999999999999995 456788899999999999999999999
Q ss_pred CccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHH-Hh-cCCCeEEEEccCchhhhhcC
Q 000689 555 GFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALD-RF-MIGRTTLVIAHRLSTIRKAD 632 (1350)
Q Consensus 555 g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~itH~l~~~~~~d 632 (1350)
||||. .+|||||||||+||||++++|+|||||||||+||+++++.+++.+. .+ .+++|+|+||||++++..||
T Consensus 464 g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d 538 (555)
T TIGR01194 464 GFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELAD 538 (555)
T ss_pred ccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCC
Confidence 99994 7899999999999999999999999999999999999999988764 34 46899999999999999999
Q ss_pred EEEEEeCCEEEEe
Q 000689 633 VVAVLQQGSVSEI 645 (1350)
Q Consensus 633 ~i~vl~~G~i~~~ 645 (1350)
+|++|++|+++|.
T Consensus 539 ~i~~l~~G~i~~~ 551 (555)
T TIGR01194 539 QIIKLAAGCIVKD 551 (555)
T ss_pred EEEEEECCEEEEe
Confidence 9999999999875
No 70
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.5e-72 Score=760.18 Aligned_cols=501 Identities=19% Similarity=0.233 Sum_probs=414.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 159 AIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVT 238 (1350)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 238 (1350)
+..++.+++.+++.+.+.+...++|.++++++++.|+.|||+. ++|++++|+++|++.+++.+...+..++..++.+++
T Consensus 937 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~ 1015 (1490)
T TIGR01271 937 SVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLG 1015 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667777788889999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHH
Q 000689 239 GFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALK 318 (1350)
Q Consensus 239 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~ 318 (1350)
.++++++++|.++++++.++.+++++..++.+..++..+......+.+.+++.|++.|+.+||+|++|+.+.++|.+..+
T Consensus 1016 ~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~ 1095 (1490)
T TIGR01271 1016 AIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALN 1095 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHH
Confidence 99999999998766544444444445555666666667777777888999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 319 VAQRLGYKSGFAKGMGLGATYFVVFCS--YALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKV 396 (1350)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 396 (1350)
...+..+.......+......++..+. .++++++|.. ..+.|.+..++.+.+....++..+...+..+..++.
T Consensus 1096 ~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~ 1170 (1490)
T TIGR01271 1096 LHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMR 1170 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765544433333333222222221111 1122223322 233343333334444455567777788889999999
Q ss_pred HHHHHHHHHccCCCCCCCCCC--------------CccC--CCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEE
Q 000689 397 AAAKIFRIIDHKPSIDRNSES--------------GLEL--DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIA 460 (1350)
Q Consensus 397 s~~ri~~~l~~~~~~~~~~~~--------------~~~~--~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ 460 (1350)
|.+||.++++.+++.+...+. ...+ -+..|.|+|+||+|+|+.. .+++|+|+||+|++||++|
T Consensus 1171 s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gekva 1249 (1490)
T TIGR01271 1171 SVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVG 1249 (1490)
T ss_pred HHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEE
Confidence 999999999876653211100 0001 1245789999999999743 3579999999999999999
Q ss_pred EEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHH
Q 000689 461 LVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAA 540 (1350)
Q Consensus 461 ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~ 540 (1350)
|||+||||||||+++|+|+|+ ++|+|+|||+|+++++.+.+|++|+||||||.||+|||||||.... .++++++++|+
T Consensus 1250 IvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL 1327 (1490)
T TIGR01271 1250 LLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVA 1327 (1490)
T ss_pred EECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHH
Confidence 999999999999999999997 7999999999999999999999999999999999999999997654 57899999999
Q ss_pred HHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 000689 541 RVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLV 620 (1350)
Q Consensus 541 ~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~ 620 (1350)
+.+++++++.++|+|+||.+|++|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+
T Consensus 1328 ~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~ 1407 (1490)
T TIGR01271 1328 EEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVIL 1407 (1490)
T ss_pred HHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHHh
Q 000689 621 IAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAA 670 (1350)
Q Consensus 621 itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~~ 670 (1350)
||||++++.+||+|+||++|+|+|.|+|++|+++ ++.|+++++.+...
T Consensus 1408 IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1408 SEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADRL 1455 (1490)
T ss_pred EecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhChh
Confidence 9999999999999999999999999999999975 78999998766543
No 71
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-74 Score=723.36 Aligned_cols=501 Identities=24% Similarity=0.371 Sum_probs=370.8
Q ss_pred ceEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC---------
Q 000689 426 GLIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--------- 495 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--------- 495 (1350)
.+|+++|++++|+... +.++|+||||++++||++|||||||||||||+++|+|+++|++|+|.++|.++.
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3799999999996321 246999999999999999999999999999999999999999999999997552
Q ss_pred -CCCHH---HHh-ccEEEEccCC--Cccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCcc---chhc
Q 000689 496 -SLKLR---WLR-QQIGLVSQEP--ALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD---TQVR 561 (1350)
Q Consensus 496 -~~~~~---~~r-~~i~~v~Q~~--~lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~ 561 (1350)
+.+.. .+| ++||||+|+| .++. .||.|||.++.. ..+..+..+ .+.+.+..+ |+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 163 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQV--RIPEAQTILS 163 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChhhHHh
Confidence 22222 233 5799999998 5665 499999987521 112222111 122334444 442 3467
Q ss_pred CCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEe
Q 000689 562 ERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQ 638 (1350)
Q Consensus 562 ~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~vl~ 638 (1350)
....+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|+|||+++.+.. ||+|++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 7888999999999999999999999999999999999999999999999885 3 8999999999999865 99999999
Q ss_pred CCEEEEecChHHHHhccCCcHHH-HHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcc
Q 000689 639 QGSVSEIGTHDELIAKGENGVYA-KLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFST 717 (1350)
Q Consensus 639 ~G~i~~~g~~~~l~~~~~~~~y~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1350)
+|+|++.|++++++..+. ..|. .+.... +... .. .+.
T Consensus 244 ~G~i~~~g~~~~~~~~~~-~~~~~~l~~~~-----------------~~~~-~~-----------~~~------------ 281 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQ-HPYTRALLAAV-----------------PQLG-AM-----------KGL------------ 281 (623)
T ss_pred CCeecccCCHHHhhcCCC-Chhhhhhhhcc-----------------Cccc-cc-----------ccc------------
Confidence 999999999888764311 1110 000000 0000 00 000
Q ss_pred CcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHH
Q 000689 718 SDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIR 797 (1350)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1350)
T Consensus 282 -------------------------------------------------------------------------------- 281 (623)
T PRK10261 282 -------------------------------------------------------------------------------- 281 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHH
Q 000689 798 EIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIG 877 (1350)
Q Consensus 798 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~ 877 (1350)
..+-. +.. ...
T Consensus 282 -----------------------------------------------~~~~~-~~~--~~~------------------- 292 (623)
T PRK10261 282 -----------------------------------------------DYPRR-FPL--ISL------------------- 292 (623)
T ss_pred -----------------------------------------------cCCcc-ccc--ccc-------------------
Confidence 00000 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHh
Q 000689 878 DRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAF 957 (1350)
Q Consensus 878 ~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~ 957 (1350)
T Consensus 293 -------------------------------------------------------------------------------- 292 (623)
T PRK10261 293 -------------------------------------------------------------------------------- 292 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Q 000689 958 NSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAE 1037 (1350)
Q Consensus 958 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1350)
.. ..
T Consensus 293 --------------~~---------------------------------------~~----------------------- 296 (623)
T PRK10261 293 --------------EH---------------------------------------PA----------------------- 296 (623)
T ss_pred --------------cc---------------------------------------cc-----------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC--------CCCcccceeEEEe
Q 000689 1038 TLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRP--------DIPIFRDLSLRAR 1109 (1350)
Q Consensus 1038 ~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~--------~~~vL~~vsl~I~ 1109 (1350)
...+..... . .. ....-++++||+++|+.+. ..++|+||||+|+
T Consensus 297 ---------------------~~~~~~~~~----~-~~--~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~ 348 (623)
T PRK10261 297 ---------------------KQEPPIEQD----T-VV--DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLW 348 (623)
T ss_pred ---------------------ccCcccccc----c-cc--CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEc
Confidence 000000000 0 00 0011499999999996321 2369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---HhhcccEEEccCC--ccCc-ccHHHHhccCC
Q 000689 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRRHMAIVPQEP--CLFA-STIYENIAYGH 1183 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR~~i~~VpQdp--~LF~-gTIreNL~~~~ 1183 (1350)
+||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+.. .+|++|+||||+| .++. .|+.+|+.++.
T Consensus 349 ~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~ 428 (623)
T PRK10261 349 PGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPL 428 (623)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999877543 4678899999998 3664 59999997531
Q ss_pred --CCC-CH----HHHHHHHHHhccH-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHH
Q 000689 1184 --ESA-TE----SEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAE 1255 (1350)
Q Consensus 1184 --~~~-td----~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~ 1255 (1350)
... .. +++.+.++..++. +.. .....+||||||||++|||||+.+|+|||||||||+||+.
T Consensus 429 ~~~~~~~~~~~~~~~~~~L~~~gL~~~~~-----------~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~ 497 (623)
T PRK10261 429 RVHGLLPGKAAAARVAWLLERVGLLPEHA-----------WRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVS 497 (623)
T ss_pred HHcCCCCHHHHHHHHHHHHHHcCCCHHHh-----------hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHH
Confidence 111 11 3345555556553 222 2334579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchhHH-HHH
Q 000689 1256 SERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYAR-MIQ 1320 (1350)
Q Consensus 1256 te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~-l~~ 1320 (1350)
+...|.+.|+++. .|.|+|+|||+++.+.. ||||+||++|+|+|.|++++++.. +...|.+ ++.
T Consensus 498 ~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~-p~~~~~~~l~~ 565 (623)
T PRK10261 498 IRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN-PQHPYTRKLMA 565 (623)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC-CCCHHHHHHHh
Confidence 9999999998865 37899999999999976 999999999999999999999875 5566655 444
No 72
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-73 Score=708.54 Aligned_cols=462 Identities=24% Similarity=0.407 Sum_probs=359.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCeeCCCCCHH-HHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP--TSGQVLLDGHDIKSLKLR-WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~i~g~~~~~~~~~-~~r 503 (1350)
+|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+.. ..|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 6999999999963 3699999999999999999999999999999999999996 899999999999877654 356
Q ss_pred ccEEEEccCCCcccc-cHHHHhhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 504 QQIGLVSQEPALFAT-TIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
+++|||+|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988865 999999987431 12222211 123344444 55555666778999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+.+|+|||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999999999998874 58999999999999875 999999999999987754332100
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhh
Q 000689 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
+.++
T Consensus 234 ------~~~~---------------------------------------------------------------------- 237 (506)
T PRK13549 234 ------DIIT---------------------------------------------------------------------- 237 (506)
T ss_pred ------HHHH----------------------------------------------------------------------
Confidence 0000
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000689 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
T Consensus 238 -------------------------------------------------------------------------------- 237 (506)
T PRK13549 238 -------------------------------------------------------------------------------- 237 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~ 895 (1350)
. ++..+ .
T Consensus 238 ----------------------~-----------~~~~~---~------------------------------------- 244 (506)
T PRK13549 238 ----------------------M-----------MVGRE---L------------------------------------- 244 (506)
T ss_pred ----------------------H-----------hhCcC---c-------------------------------------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000689 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v 1055 (1350)
. .
T Consensus 245 -------------------------------------------~----------------------------------~- 246 (506)
T PRK13549 245 -------------------------------------------T----------------------------------A- 246 (506)
T ss_pred -------------------------------------------c----------------------------------c-
Confidence 0 0
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000689 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1135 (1350)
. .+.. .. . .....|+++||+++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|++
T Consensus 247 --~--~~~~-~~-------~--~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~ 312 (506)
T PRK13549 247 --L--YPRE-PH-------T--IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAY 312 (506)
T ss_pred --c--cccc-cc-------C--CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCC
Confidence 0 0000 00 0 0011489999999995322346999999999999999999999999999999999999
Q ss_pred C-CCccEEEECCccCCCCCH-HHhhcccEEEccCC---ccCc-ccHHHHhccCCC-C------CCHHHHHHHHHHhccHH
Q 000689 1136 E-PSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLFA-STIYENIAYGHE-S------ATESEIIEAARLANADK 1202 (1350)
Q Consensus 1136 ~-p~~G~I~iDG~di~~~~l-~~lR~~i~~VpQdp---~LF~-gTIreNL~~~~~-~------~td~ei~~al~~a~l~~ 1202 (1350)
+ |++|+|.++|.++...+. +.+|++++||||+| .+|. .|+.||+.++.. . .+.++. ...+.+
T Consensus 313 ~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~ 387 (506)
T PRK13549 313 PGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILE 387 (506)
T ss_pred CCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHH
Confidence 8 599999999999865543 45677899999997 3554 599999986421 0 111111 112333
Q ss_pred HHhcCCCCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCc
Q 000689 1203 FISSLPDGYKT-FVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRL 1280 (1350)
Q Consensus 1203 ~I~~lp~Gldt-~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRl 1280 (1350)
+++.+ |++. ........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +|+|||+|||++
T Consensus 388 ~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~ 465 (506)
T PRK13549 388 SIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSEL 465 (506)
T ss_pred HHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCH
Confidence 44443 3321 2344456799999999999999999999999999999999999999999998864 589999999999
Q ss_pred hhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1281 STIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1281 sti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+.+.. |||+++|++|+++..|+++++.
T Consensus 466 ~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 466 PEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 99866 9999999999999999988774
No 73
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.5e-72 Score=701.81 Aligned_cols=465 Identities=28% Similarity=0.459 Sum_probs=358.9
Q ss_pred eEEEEEEEEECCCC-CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHH
Q 000689 427 LIELKHVDFSYPSR-PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++|++++|+.. ...++|+|+||++++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 69999999999631 124699999999999999999999999999999999999987 799999999999876643
Q ss_pred H---Hh-ccEEEEccCCC--ccc-ccHHHHhhcCC---CCCCHHHHHHHHHHhchHHHHhcCCCCccc---hhcCCCCCC
Q 000689 501 W---LR-QQIGLVSQEPA--LFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFDT---QVRERGVQL 567 (1350)
Q Consensus 501 ~---~r-~~i~~v~Q~~~--lf~-~ti~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t---~~~~~g~~L 567 (1350)
. +| +++|||+|++. ++. .|+++|+.++. ...+.++..+ .+.+.+..+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG-----EILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChHHHHhhCCccc
Confidence 2 33 57999999985 444 49999986431 1112222111 122334333 4432 346678899
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 644 (1350)
|||||||++|||||+.+|++||||||||+||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999874 38999999999999875 99999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccc
Q 000689 645 IGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSL 724 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1350)
.|+++++.... ...+.
T Consensus 238 ~g~~~~~~~~~-~~~~~--------------------------------------------------------------- 253 (529)
T PRK15134 238 QNRAATLFSAP-THPYT--------------------------------------------------------------- 253 (529)
T ss_pred eCCHHHHhhCC-CCHHH---------------------------------------------------------------
Confidence 99876654220 00000
Q ss_pred cCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 000689 725 DATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCY 804 (1350)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1350)
T Consensus 254 -------------------------------------------------------------------------------- 253 (529)
T PRK15134 254 -------------------------------------------------------------------------------- 253 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000689 805 LLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIV 884 (1350)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i 884 (1350)
+.++ ..+ .
T Consensus 254 --------------------------------~~~~----~~~-----~------------------------------- 261 (529)
T PRK15134 254 --------------------------------QKLL----NSE-----P------------------------------- 261 (529)
T ss_pred --------------------------------HHHH----HhC-----c-------------------------------
Confidence 0000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHH
Q 000689 885 QNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIV 964 (1350)
Q Consensus 885 ~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~ 964 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 965 GLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD 1044 (1350)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCC--------CCCCcccceeEEEeCCCEEEE
Q 000689 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSR--------PDIPIFRDLSLRARAGKTLAL 1116 (1350)
Q Consensus 1045 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~--------~~~~vL~~vsl~I~~Ge~vaI 1116 (1350)
+ ..+...+ . . ...-|+++||+++|+.. .+.++|+|+||+|++||++||
T Consensus 262 ---------~------~~~~~~~--~----~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i 317 (529)
T PRK15134 262 ---------S------GDPVPLP--E----P---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGL 317 (529)
T ss_pred ---------c------ccccccC--C----C---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEE
Confidence 0 0000000 0 0 01148999999999621 124699999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hhcccEEEccCC--ccCc-ccHHHHhccCCC----CC
Q 000689 1117 VGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRRHMAIVPQEP--CLFA-STIYENIAYGHE----SA 1186 (1350)
Q Consensus 1117 VG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR~~i~~VpQdp--~LF~-gTIreNL~~~~~----~~ 1186 (1350)
+|+||||||||+++|.|++ |++|+|++||.++...+... +|++++||||+| .+|. .|++||+.++.. ..
T Consensus 318 ~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~ 396 (529)
T PRK15134 318 VGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTL 396 (529)
T ss_pred ECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccC
Confidence 9999999999999999998 48999999999998766543 478899999998 3665 599999986421 01
Q ss_pred C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH
Q 000689 1187 T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQE 1262 (1350)
Q Consensus 1187 t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~ 1262 (1350)
. ++.+.++++..++.+ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+
T Consensus 397 ~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~ 466 (529)
T PRK15134 397 SAAQREQQVIAVMEEVGLDP----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILA 466 (529)
T ss_pred ChHHHHHHHHHHHHHcCCCH----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHH
Confidence 1 123444455554431 11233446799999999999999999999999999999999999999999
Q ss_pred HHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1263 ALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1263 ~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
.|++.. .|+|||+|||+++.+.. ||+|++|++|+|++.|++++++..
T Consensus 467 ~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 467 LLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred HHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 999875 37999999999999876 999999999999999999999865
No 74
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-72 Score=698.10 Aligned_cols=459 Identities=23% Similarity=0.398 Sum_probs=354.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 6999999999963 35999999999999999999999999999999999999999999999999998777654 4567
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCC---------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDA---------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~---------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
++||+|++.++.. |++||+.++.... +.++..+ .+.+.+..+ |+.........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988865 9999998764210 1111111 123344444 555555667789999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999999875 48999999999999975 99999999999998876554321
Q ss_pred ccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhh
Q 000689 654 KGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRH 733 (1350)
Q Consensus 654 ~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1350)
. ++.+ .
T Consensus 235 ~-------~~~~-------~------------------------------------------------------------ 240 (510)
T PRK09700 235 D-------DIVR-------L------------------------------------------------------------ 240 (510)
T ss_pred H-------HHHH-------H------------------------------------------------------------
Confidence 0 0000 0
Q ss_pred hhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHH
Q 000689 734 EKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAE 813 (1350)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 813 (1350)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 814 LLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVA 893 (1350)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~ 893 (1350)
.+.....
T Consensus 241 ------------------------------------~~~~~~~------------------------------------- 247 (510)
T PRK09700 241 ------------------------------------MVGRELQ------------------------------------- 247 (510)
T ss_pred ------------------------------------hcCCCcc-------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHH
Q 000689 894 CTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQT 973 (1350)
Q Consensus 894 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~ 973 (1350)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 974 PLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMR 1053 (1350)
Q Consensus 974 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 1053 (1350)
.
T Consensus 248 -------------------------------------------------------------------------------~ 248 (510)
T PRK09700 248 -------------------------------------------------------------------------------N 248 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhc
Q 000689 1054 SVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQR 1133 (1350)
Q Consensus 1054 ~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~r 1133 (1350)
+ .....+. +... . ....|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|
T Consensus 249 ~---~~~~~~~--~~~~----~---~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~G 311 (510)
T PRK09700 249 R---FNAMKEN--VSNL----A---HETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFG 311 (510)
T ss_pred c---ccccccc--cccC----C---CCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 0 0000000 0000 0 011499999999762 38999999999999999999999999999999999
Q ss_pred cCCCCccEEEECCccCCCCCH-HHhhcccEEEccCC---ccCc-ccHHHHhccCCCC-----------CCHHHHHHHHHH
Q 000689 1134 FYEPSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLFA-STIYENIAYGHES-----------ATESEIIEAARL 1197 (1350)
Q Consensus 1134 l~~p~~G~I~iDG~di~~~~l-~~lR~~i~~VpQdp---~LF~-gTIreNL~~~~~~-----------~td~ei~~al~~ 1197 (1350)
+++|++|+|.++|.++...+. ..+|++++||||++ .+|. -|++||+.++... ....+. .
T Consensus 312 l~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~ 386 (510)
T PRK09700 312 VDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----Q 386 (510)
T ss_pred CCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----H
Confidence 999999999999999876543 45678999999984 4665 4999999865310 011110 1
Q ss_pred hccHHHHhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEE
Q 000689 1198 ANADKFISSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIV 1275 (1350)
Q Consensus 1198 a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~ 1275 (1350)
..+.+.++.+ |+. .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|||+
T Consensus 387 ~~~~~~l~~~--~l~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~ 464 (510)
T PRK09700 387 RTAENQRELL--ALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILM 464 (510)
T ss_pred HHHHHHHHhc--CCCCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 1122333332 232 12233445799999999999999999999999999999999999999999998864 5899999
Q ss_pred EecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1276 VAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1276 IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|||+++.+.. ||+|++|++|++++.+++.+
T Consensus 465 vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 465 VSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred EcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 9999998865 99999999999999887633
No 75
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-71 Score=610.81 Aligned_cols=473 Identities=34% Similarity=0.520 Sum_probs=367.0
Q ss_pred eEEEEEEEEECCC-CCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHH
Q 000689 427 LIELKHVDFSYPS-RPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~-~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~ 500 (1350)
.++++|++..|.. .....++++|||+|++||++||||+||||||-..+.++|+++- -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4889999888852 2245699999999999999999999999999999999999864 379999999999988888
Q ss_pred HHhc----cEEEEccCCC--cccc-cHHHHh----hcCCCCCCHHHHHHHHHHhchHHHHh--cCCCCccchhcCCCCCC
Q 000689 501 WLRQ----QIGLVSQEPA--LFAT-TIKENI----LLGRPDADLNEIEEAARVANAYSFII--KLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 501 ~~r~----~i~~v~Q~~~--lf~~-ti~eNi----~~g~~~~~~~~~~~~~~~~~~~~~i~--~lp~g~~t~~~~~g~~L 567 (1350)
.+|. +|+++||||. |-+- ||...| .+-+. .+. ++..+.+.+.+. .+|+ -.-.+...+.+|
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg-~~~-----~~Ar~r~lelL~~VgI~~-p~~rl~~yPHeL 158 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRG-LSR-----AAARARALELLELVGIPE-PEKRLDAYPHEL 158 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhc-ccH-----HHHHHHHHHHHHHcCCCc-hhhhhhhCCccc
Confidence 7774 7999999994 2221 554444 33221 111 111112222222 2222 123566778999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 644 (1350)
||||||||.||.||+.+|++||-||||.|||......|.+.|+++. .|..+++|||+|..++. ||||+||.+|+|+|
T Consensus 159 SGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE 238 (534)
T COG4172 159 SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVE 238 (534)
T ss_pred CcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEee
Confidence 9999999999999999999999999999999999999999999885 48999999999999987 99999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccc
Q 000689 645 IGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSL 724 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 724 (1350)
.|+.+++...+++.+.+.|...
T Consensus 239 ~~~t~~lF~~PqHpYTr~Ll~a---------------------------------------------------------- 260 (534)
T COG4172 239 TGTTETLFAAPQHPYTRKLLAA---------------------------------------------------------- 260 (534)
T ss_pred cCcHHHHhhCCCChHHHHHHhc----------------------------------------------------------
Confidence 9999888876533322222210
Q ss_pred cCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHH
Q 000689 725 DATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCY 804 (1350)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 804 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000689 805 LLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIV 884 (1350)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i 884 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHH
Q 000689 885 QNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIV 964 (1350)
Q Consensus 885 ~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~ 964 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 965 GLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD 1044 (1350)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1350)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCC--------CCCcccceeEEEeCCCEEEE
Q 000689 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRP--------DIPIFRDLSLRARAGKTLAL 1116 (1350)
Q Consensus 1045 ~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~--------~~~vL~~vsl~I~~Ge~vaI 1116 (1350)
.|.-. +.+.+....--++.+||...||-++ ...+++++||+.++||++||
T Consensus 261 -----------------eP~g~-----~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGl 318 (534)
T COG4172 261 -----------------EPSGD-----PPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGL 318 (534)
T ss_pred -----------------CCCCC-----CCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEE
Confidence 00000 0000000111244444444444211 12478999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hhcccEEEccCCc--cC-cccHHHHhccC----CCCC
Q 000689 1117 VGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRRHMAIVPQEPC--LF-ASTIYENIAYG----HESA 1186 (1350)
Q Consensus 1117 VG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR~~i~~VpQdp~--LF-~gTIreNL~~~----~~~~ 1186 (1350)
||+|||||||+-.+|+|+.++. |+|.++|.||..++.+. +|+++-+|+|||+ |= ..||.+-|.-| .+..
T Consensus 319 VGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~l 397 (534)
T COG4172 319 VGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKL 397 (534)
T ss_pred EecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCC
Confidence 9999999999999999999876 99999999999888765 7789999999995 21 24766665543 2333
Q ss_pred C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHH
Q 000689 1187 T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQE 1262 (1350)
Q Consensus 1187 t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~ 1262 (1350)
+ ++.+.+|++.+|++.-... .....||||||||||||||++-+|++++||||||+||-.-+..|.+
T Consensus 398 s~~eR~~rv~~aL~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~ 467 (534)
T COG4172 398 SAAERDQRVIEALEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLD 467 (534)
T ss_pred CHHHHHHHHHHHHHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHH
Confidence 3 3457888888888764432 2346799999999999999999999999999999999999999999
Q ss_pred HHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchhHHH
Q 000689 1263 ALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1263 ~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
.|+++. .|-+-++|+|+|..++. ||+|+||.+|+|||+|+-++++.+ |.-.|.+-
T Consensus 468 LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~-P~~~YT~~ 525 (534)
T COG4172 468 LLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFAN-PQHEYTRA 525 (534)
T ss_pred HHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcC-CCcHHHHH
Confidence 999875 47899999999999987 999999999999999999999988 78888664
No 76
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.1e-69 Score=678.65 Aligned_cols=535 Identities=17% Similarity=0.169 Sum_probs=432.8
Q ss_pred HHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 744 SFWRLAKMNS-PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 744 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
..++++++.+ +.++.++++++++++.++.....+++++.+++....... .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLGQ--------GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc--------hHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666 777777777777777777666666666655432110000 0111233445556678888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 902 (1350)
+...++.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++.++.. +..++..++.+++.++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~--~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEIDR--RGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHh--cCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999999999999999999999999999986 78999999999999999998864 77777888888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHH--HHHHHHHHHHHHHHHHHHH
Q 000689 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSEL--MIVGLFSSNLQTPLRRCFW 980 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~ 980 (1350)
.+++++++.+|+.++...+.....+...++.++..+...+.+.|.+.|+++||+|+.++ ...++|.+..++..+....
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999988888877776666555556566677777888999999999999999999954 5567777777766665554
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000689 981 KGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLD 1060 (1350)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~ 1060 (1350)
..........+..++.++..++.+|++.+. |.++++.++++..+......++..+......+.++..+++|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444555555555555665543 68899998888888888889999999999999999999999999976
Q ss_pred ccccCCC--CCCCCC-C---CCCCCCCcEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHh
Q 000689 1061 RKTEIEP--DDPDAT-P---VPDRLRGEVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQ 1132 (1350)
Q Consensus 1061 ~~~~~~~--~~~~~~-~---~~~~~~g~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~ 1132 (1350)
.+.+.++ +.+... . .+....+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 4221111 001000 0 1112346899999999997532 236999999999999999999999999999999999
Q ss_pred ccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCcc
Q 000689 1133 RFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYK 1212 (1350)
Q Consensus 1133 rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gld 1212 (1350)
|+|+|++|+|++||+|+++++.+++|+++++|+|||++|++|+++|+ .+++++++++++++.+++++++..+|+|||
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 356789999999999999999999999999
Q ss_pred ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH-Hh-cCCceEEEEecCchhhhhcCEEE
Q 000689 1213 TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALD-RA-CSGKTTIVVAHRLSTIRNAHVIA 1290 (1350)
Q Consensus 1213 t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~-~~-~~g~TvI~IaHRlsti~~~DrI~ 1290 (1350)
|. .+|||||||||+||||++++|+|||||||||+||++||+.+++.+. +. .+|+|+|+||||++++..||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 94 6899999999999999999999999999999999999999998764 33 46899999999999999999999
Q ss_pred EEeCCeEEEe
Q 000689 1291 VIDDGKVAEL 1300 (1350)
Q Consensus 1291 Vl~~GrIvE~ 1300 (1350)
||++|+|+|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999974
No 77
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.9e-72 Score=691.92 Aligned_cols=454 Identities=24% Similarity=0.400 Sum_probs=353.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
+|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 5899999999963 36999999999999999999999999999999999999999999999999987655443 4678
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
++||+|++.++.. |++||+.++... .+.++..+ .+.+.+..+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988865 999999987431 11121111 123344444 555555666789999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998874 47899999999999875 999999999999987654332100
Q ss_pred CcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhh
Q 000689 657 NGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKL 736 (1350)
Q Consensus 657 ~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (1350)
.+.
T Consensus 232 -----~~~------------------------------------------------------------------------ 234 (501)
T PRK10762 232 -----SLI------------------------------------------------------------------------ 234 (501)
T ss_pred -----HHH------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 737 AFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLF 816 (1350)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 816 (1350)
..
T Consensus 235 ------------------------------------------------~~------------------------------ 236 (501)
T PRK10762 235 ------------------------------------------------EM------------------------------ 236 (501)
T ss_pred ------------------------------------------------HH------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 817 NTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTA 896 (1350)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~ 896 (1350)
++...
T Consensus 237 ---------------------------------~~~~~------------------------------------------ 241 (501)
T PRK10762 237 ---------------------------------MVGRK------------------------------------------ 241 (501)
T ss_pred ---------------------------------hcCCC------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000689 897 GFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLR 976 (1350)
Q Consensus 897 ~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~ 976 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 977 RCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVF 1056 (1350)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~ 1056 (1350)
.
T Consensus 242 ------------------------------------------------------------------------------~- 242 (501)
T PRK10762 242 ------------------------------------------------------------------------------L- 242 (501)
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred HHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC
Q 000689 1057 DLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE 1136 (1350)
Q Consensus 1057 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~ 1136 (1350)
...++... . . ...-.|+++||++ ++|+|+||+|++||++||+|+||||||||+++|.|+++
T Consensus 243 --~~~~~~~~----~---~--~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~ 303 (501)
T PRK10762 243 --EDQYPRLD----K---A--PGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP 303 (501)
T ss_pred --cccccccc----c---C--CCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC
Confidence 00000000 0 0 0011488999973 37999999999999999999999999999999999999
Q ss_pred CCccEEEECCccCCCCCH-HHhhcccEEEccCC---ccC-cccHHHHhccCCCC--------CCHHHHHHHHHHhccHHH
Q 000689 1137 PSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLF-ASTIYENIAYGHES--------ATESEIIEAARLANADKF 1203 (1350)
Q Consensus 1137 p~~G~I~iDG~di~~~~l-~~lR~~i~~VpQdp---~LF-~gTIreNL~~~~~~--------~td~ei~~al~~a~l~~~ 1203 (1350)
|++|+|.+||.++...+. +.+|++++||||+| .+| ..|++||+.++... .+.++. ...+.++
T Consensus 304 p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 378 (501)
T PRK10762 304 RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDF 378 (501)
T ss_pred CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHH
Confidence 999999999999987665 34678899999997 344 46999999864210 111111 1112333
Q ss_pred HhcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCch
Q 000689 1204 ISSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLS 1281 (1350)
Q Consensus 1204 I~~lp~Gld-t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRls 1281 (1350)
+..+ |+. .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++
T Consensus 379 l~~~--~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~ 456 (501)
T PRK10762 379 IRLF--NIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP 456 (501)
T ss_pred HHhc--CCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4333 332 22344556799999999999999999999999999999999999999999999875 5899999999999
Q ss_pred hhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1282 TIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1282 ti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
.+.. ||+|++|++|++++.|+++++.
T Consensus 457 ~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 457 EVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred HHHhhCCEEEEEECCEEEEEeccccCC
Confidence 9866 9999999999999999887653
No 78
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=6.8e-72 Score=695.11 Aligned_cols=458 Identities=26% Similarity=0.466 Sum_probs=351.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CCCCcEEEEC---------------
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY--DPTSGQVLLD--------------- 490 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~~~G~i~i~--------------- 490 (1350)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 36999999999999999999999999999999999996 7999999997
Q ss_pred --------CeeCC-------CCC---HHHHhccEEEEccC-CCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHH
Q 000689 491 --------GHDIK-------SLK---LRWLRQQIGLVSQE-PALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSF 548 (1350)
Q Consensus 491 --------g~~~~-------~~~---~~~~r~~i~~v~Q~-~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~ 548 (1350)
|.++. ..+ ...+|+.++||+|+ +.+|+ .|++||+.++.. ..+.++..+ .+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVG-----RAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHH
Confidence 33321 111 13457789999998 57776 499999987532 122222111 22334
Q ss_pred HhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCch
Q 000689 549 IIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLS 626 (1350)
Q Consensus 549 i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 626 (1350)
+..+ |++........+||||||||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 4444 66666677788999999999999999999999999999999999999999999999874 3899999999999
Q ss_pred hhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCC
Q 000689 627 TIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGR 705 (1350)
Q Consensus 627 ~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1350)
.+.. ||+|++|++|++++.|+++++... |.
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~~-------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV-----FM-------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH-----HH--------------------------------------------
Confidence 9875 999999999999877654433210 00
Q ss_pred CCccccccCCccCcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 706 SPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMS 785 (1350)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1350)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHH
Q 000689 786 VYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARL 865 (1350)
Q Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl 865 (1350)
. .
T Consensus 262 ------------------------------------------------------------------~---~--------- 263 (520)
T TIGR03269 262 ------------------------------------------------------------------E---G--------- 263 (520)
T ss_pred ------------------------------------------------------------------h---h---------
Confidence 0 0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 000689 866 ALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAG 945 (1350)
Q Consensus 866 ~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1350)
+ .
T Consensus 264 ------------------------------------~------------------------~------------------ 265 (520)
T TIGR03269 264 ------------------------------------V------------------------S------------------ 265 (520)
T ss_pred ------------------------------------c------------------------h------------------
Confidence 0 0
Q ss_pred HHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 000689 946 EAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVF 1025 (1350)
Q Consensus 946 e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 1025 (1350)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCC--CCCCCcccc
Q 000689 1026 MVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPS--RPDIPIFRD 1103 (1350)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~--~~~~~vL~~ 1103 (1350)
++ ..+.. . +. ...-|+++||+++|+. +...++|+|
T Consensus 266 ----------------------------~~----~~~~~-~---~~-------~~~~l~~~~l~~~~~~~~~~~~~il~~ 302 (520)
T TIGR03269 266 ----------------------------EV----EKECE-V---EV-------GEPIIKVRNVSKRYISVDRGVVKAVDN 302 (520)
T ss_pred ----------------------------hh----ccccc-c---CC-------CCceEEEeccEEEeccCCCCCceEEee
Confidence 00 00000 0 00 0114999999999963 112469999
Q ss_pred eeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEEC-Ccc---CCCCC---HHHhhcccEEEccCCccCc-ccH
Q 000689 1104 LSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMID-GKD---IRKYN---LKSLRRHMAIVPQEPCLFA-STI 1175 (1350)
Q Consensus 1104 vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iD-G~d---i~~~~---l~~lR~~i~~VpQdp~LF~-gTI 1175 (1350)
+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.+ +...+ ...+|++++||||++.+|. .|+
T Consensus 303 is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 382 (520)
T TIGR03269 303 VSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTV 382 (520)
T ss_pred EEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcH
Confidence 999999999999999999999999999999999999999996 643 33332 2356778999999998886 499
Q ss_pred HHHhccCCC-CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCC
Q 000689 1176 YENIAYGHE-SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATS 1250 (1350)
Q Consensus 1176 reNL~~~~~-~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTS 1250 (1350)
+||+.++.. ... ++++.++++..++.+. ..+.........||||||||++|||||+.+|+||||||||+
T Consensus 383 ~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~ 456 (520)
T TIGR03269 383 LDNLTEAIGLELPDELARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTG 456 (520)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999975311 111 1233444444444210 00001233446799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1251 ALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1251 aLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+||+.+.+.+.+.|++.. .|.|||+|||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 457 ~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 518 (520)
T TIGR03269 457 TMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVEE 518 (520)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhh
Confidence 999999999999998874 37999999999999876 999999999999999999988653
No 79
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.3e-68 Score=713.28 Aligned_cols=225 Identities=26% Similarity=0.412 Sum_probs=192.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +....|++
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 369999999999632 3469999999999999999999999999999999999999999999999999864 45667889
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
+|||||++.+|+. |++|||.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999875 99999987522 112222211 123344444 6666777888999999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcH
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGV 659 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 659 (1350)
.+|+|||||||||+||+.+++.+.+.|+++.+|+|+|++||+++.+.. ||||++|++|++++.|+.++|.++...|+
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~g~gy 1155 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGF 1155 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhcCCcE
Confidence 999999999999999999999999999998789999999999999975 99999999999999999999987643343
No 80
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-71 Score=688.52 Aligned_cols=456 Identities=24% Similarity=0.409 Sum_probs=350.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. +.+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 5899999999963 359999999999999999999999999999999999999999999999999875543 456788
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
||||+|++.+|.. |++||+.++... .+..+..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 11222111 223445544 5554456677899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCC
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGEN 657 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 657 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999998874 48999999999999865 99999999999986442100000
Q ss_pred cHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhh
Q 000689 658 GVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLA 737 (1350)
Q Consensus 658 ~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (1350)
. +.
T Consensus 230 --------------------------------------------------------------------------~-~~-- 232 (501)
T PRK11288 230 --------------------------------------------------------------------------R-DQ-- 232 (501)
T ss_pred --------------------------------------------------------------------------H-HH--
Confidence 0 00
Q ss_pred hhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 738 FKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFN 817 (1350)
Q Consensus 738 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 817 (1350)
+
T Consensus 233 ----------~--------------------------------------------------------------------- 233 (501)
T PRK11288 233 ----------L--------------------------------------------------------------------- 233 (501)
T ss_pred ----------H---------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 818 TLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG 897 (1350)
Q Consensus 818 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~ 897 (1350)
.+.+ .... .
T Consensus 234 ----------------------~~~~-------~~~~---~--------------------------------------- 242 (501)
T PRK11288 234 ----------------------VQAM-------VGRE---I--------------------------------------- 242 (501)
T ss_pred ----------------------HHHh-------cCCC---c---------------------------------------
Confidence 0000 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000689 898 FVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRR 977 (1350)
Q Consensus 898 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~ 977 (1350)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 978 CFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFD 1057 (1350)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~ 1057 (1350)
...
T Consensus 243 ---------------------------------------------------------------------------~~~-- 245 (501)
T PRK11288 243 ---------------------------------------------------------------------------GDI-- 245 (501)
T ss_pred ---------------------------------------------------------------------------ccc--
Confidence 000
Q ss_pred HhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC
Q 000689 1058 LLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP 1137 (1350)
Q Consensus 1058 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p 1137 (1350)
... .+. + ..+..++++|+++. .+++|+||+|++||++||+||||||||||+++|.|+++|
T Consensus 246 -~~~----~~~-----~---~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p 305 (501)
T PRK11288 246 -YGY----RPR-----P---LGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRR 305 (501)
T ss_pred -ccc----ccc-----C---CCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcC
Confidence 000 000 0 00114889999732 389999999999999999999999999999999999999
Q ss_pred CccEEEECCccCCCCC-HHHhhcccEEEccCCc---cC-cccHHHHhccCCCCC--------CHHHHHHHHHHhccHHHH
Q 000689 1138 SSGRVMIDGKDIRKYN-LKSLRRHMAIVPQEPC---LF-ASTIYENIAYGHESA--------TESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1138 ~~G~I~iDG~di~~~~-l~~lR~~i~~VpQdp~---LF-~gTIreNL~~~~~~~--------td~ei~~al~~a~l~~~I 1204 (1350)
++|+|.+||.++...+ .+.+|++++|+||+|. +| ..|+.||+.++.... ...+.. ..+.+++
T Consensus 306 ~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l 380 (501)
T PRK11288 306 TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-----ENADRFI 380 (501)
T ss_pred CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH-----HHHHHHH
Confidence 9999999999987543 3456789999999973 55 479999998642110 111100 1122333
Q ss_pred hcCCCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchh
Q 000689 1205 SSLPDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST 1282 (1350)
Q Consensus 1205 ~~lp~Gld-t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst 1282 (1350)
..+ |++ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|.|||+|||+++.
T Consensus 381 ~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~ 458 (501)
T PRK11288 381 RSL--NIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPE 458 (501)
T ss_pred Hhc--CcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHH
Confidence 333 231 12233445799999999999999999999999999999999999999999998865 48999999999999
Q ss_pred hhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1283 IRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1283 i~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+.. ||+|++|++|++++.|++++..
T Consensus 459 ~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 459 VLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred HHhhCCEEEEEECCEEEEEEccccCC
Confidence 965 9999999999999999988765
No 81
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.9e-71 Score=685.66 Aligned_cols=459 Identities=23% Similarity=0.369 Sum_probs=349.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCeeCCCCCHHH-Hhc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP--TSGQVLLDGHDIKSLKLRW-LRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~i~g~~~~~~~~~~-~r~ 504 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .|+
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 3599999999999999999999999999999999999987 7999999999998776543 467
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccchh-cCCCCCCChHHHHHHH
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQV-RERGVQLSGGQKQRIA 576 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-~~~g~~LSgGqkqri~ 576 (1350)
++|||+|++.++.. |++||+.++... ...++..+ .+.+.+..+ |++... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 89999999988865 999999886421 11122111 223444444 443322 3446789999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 9999999999999999999999999999999998874 48899999999999876 999999999999876532110000
Q ss_pred cCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhh
Q 000689 655 GENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHE 734 (1350)
Q Consensus 655 ~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (1350)
.+
T Consensus 232 -------~~----------------------------------------------------------------------- 233 (500)
T TIGR02633 232 -------DI----------------------------------------------------------------------- 233 (500)
T ss_pred -------HH-----------------------------------------------------------------------
Confidence 00
Q ss_pred hhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHH
Q 000689 735 KLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAEL 814 (1350)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 814 (1350)
. .
T Consensus 234 ---------------------------------------------~----~----------------------------- 235 (500)
T TIGR02633 234 ---------------------------------------------I----T----------------------------- 235 (500)
T ss_pred ---------------------------------------------H----H-----------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 815 LFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVAC 894 (1350)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~ 894 (1350)
. ++..+
T Consensus 236 -----------------------~-----------~~~~~---------------------------------------- 241 (500)
T TIGR02633 236 -----------------------M-----------MVGRE---------------------------------------- 241 (500)
T ss_pred -----------------------H-----------HhCcc----------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHH
Q 000689 895 TAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTP 974 (1350)
Q Consensus 895 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~ 974 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 975 LRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRS 1054 (1350)
Q Consensus 975 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 1054 (1350)
. .
T Consensus 242 -----------------------------------------~------------------------------------~- 243 (500)
T TIGR02633 242 -----------------------------------------I------------------------------------T- 243 (500)
T ss_pred -----------------------------------------c------------------------------------c-
Confidence 0 0
Q ss_pred HHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc
Q 000689 1055 VFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF 1134 (1350)
Q Consensus 1055 v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl 1134 (1350)
. ..+. .+ . +. .+--|+++|++++|+..++.++|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 244 --~--~~~~--~~---~--~~---~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~ 309 (500)
T TIGR02633 244 --S--LYPH--EP---H--EI---GDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGA 309 (500)
T ss_pred --c--cccc--cc---c--CC---CCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCC
Confidence 0 0000 00 0 00 01149999999999532234699999999999999999999999999999999999
Q ss_pred CCC-CccEEEECCccCCCCCH-HHhhcccEEEccCC---ccCc-ccHHHHhccCCCC-------CCHHHHHHHHHHhccH
Q 000689 1135 YEP-SSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP---CLFA-STIYENIAYGHES-------ATESEIIEAARLANAD 1201 (1350)
Q Consensus 1135 ~~p-~~G~I~iDG~di~~~~l-~~lR~~i~~VpQdp---~LF~-gTIreNL~~~~~~-------~td~ei~~al~~a~l~ 1201 (1350)
++| ++|+|.++|.++...+. ..+|++++||||++ .+|. .|+++|+.++... ...++. ...+.
T Consensus 310 ~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 384 (500)
T TIGR02633 310 YPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE-----LQIIG 384 (500)
T ss_pred CCCCCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH-----HHHHH
Confidence 995 89999999999865443 56788999999996 3565 5999999875210 111111 11122
Q ss_pred HHHhcCCCCccc-cccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecC
Q 000689 1202 KFISSLPDGYKT-FVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHR 1279 (1350)
Q Consensus 1202 ~~I~~lp~Gldt-~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHR 1279 (1350)
++++.+ |+.. ........||||||||++|||||+.+|++|||||||++||+.+.+.+++.|+++. +|.|||+|||+
T Consensus 385 ~~l~~~--~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd 462 (500)
T TIGR02633 385 SAIQRL--KVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSE 462 (500)
T ss_pred HHHHhc--CccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 333333 2221 1233345799999999999999999999999999999999999999999998864 58999999999
Q ss_pred chhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1280 LSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1280 lsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
++.+.. ||+|++|++|+++..++.++
T Consensus 463 ~~~~~~~~d~v~~l~~G~i~~~~~~~~ 489 (500)
T TIGR02633 463 LAEVLGLSDRVLVIGEGKLKGDFVNHA 489 (500)
T ss_pred HHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 999976 99999999999998776544
No 82
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=9.5e-71 Score=681.29 Aligned_cols=467 Identities=23% Similarity=0.405 Sum_probs=357.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHh-c
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLR-Q 504 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r-~ 504 (1350)
..|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ .
T Consensus 10 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 10 PLLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred ceEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 36999999999963 3599999999999999999999999999999999999999999999999999877766544 5
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
.+|||+|++.++.. |++||+.++.... .+..+ .+.+.+..+ |++........+||||||||++|||||+.
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGLPKR--QASMQ-----KMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhcccccc--hHHHH-----HHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHc
Confidence 79999999988875 9999999875321 11111 122333443 55555566778999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHH
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYA 661 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~ 661 (1350)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++... ....
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~---~~~~ 234 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD---DIIQ 234 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH---HHHH
Confidence 999999999999999999999999998874 48999999999999865 999999999999999887765321 0000
Q ss_pred HHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhhhhhh
Q 000689 662 KLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQ 741 (1350)
Q Consensus 662 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (1350)
.+ . . ....
T Consensus 235 ~~-----------~--~---~~~~-------------------------------------------------------- 242 (510)
T PRK15439 235 AI-----------T--P---AARE-------------------------------------------------------- 242 (510)
T ss_pred HH-----------h--C---cccc--------------------------------------------------------
Confidence 00 0 0 0000
Q ss_pred hHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 742 ASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQH 821 (1350)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 821 (1350)
T Consensus 243 -------------------------------------------------------------------------------- 242 (510)
T PRK15439 243 -------------------------------------------------------------------------------- 242 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 822 SFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQ 901 (1350)
Q Consensus 822 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~ 901 (1350)
....+.
T Consensus 243 -------------------------------~~~~~~------------------------------------------- 248 (510)
T PRK15439 243 -------------------------------KSLSAS------------------------------------------- 248 (510)
T ss_pred -------------------------------cccccc-------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000689 902 WRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 902 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 981 (1350)
.
T Consensus 249 --------------------------------------------------------------------------~----- 249 (510)
T PRK15439 249 --------------------------------------------------------------------------Q----- 249 (510)
T ss_pred --------------------------------------------------------------------------c-----
Confidence 0
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000689 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~ 1061 (1350)
.. . ...
T Consensus 250 ------------------------------------------------------------------------~~-~-~~~ 255 (510)
T PRK15439 250 ------------------------------------------------------------------------KL-W-LEL 255 (510)
T ss_pred ------------------------------------------------------------------------cc-c-ccc
Confidence 00 0 000
Q ss_pred cccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccE
Q 000689 1062 KTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGR 1141 (1350)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1141 (1350)
+.. .+. . + ...--|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+
T Consensus 256 ~~~-~~~--~--~---~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~ 319 (510)
T PRK15439 256 PGN-RRQ--Q--A---AGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGR 319 (510)
T ss_pred ccc-ccc--c--C---CCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcE
Confidence 000 000 0 0 0011489999983 2699999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHH-hhcccEEEccCC---ccCc-ccHHHHhccCC----CC-CCHHHHHHHHHHhccHHHHhcCCCCc
Q 000689 1142 VMIDGKDIRKYNLKS-LRRHMAIVPQEP---CLFA-STIYENIAYGH----ES-ATESEIIEAARLANADKFISSLPDGY 1211 (1350)
Q Consensus 1142 I~iDG~di~~~~l~~-lR~~i~~VpQdp---~LF~-gTIreNL~~~~----~~-~td~ei~~al~~a~l~~~I~~lp~Gl 1211 (1350)
|.++|.++...+... +|.+|+||||++ .+|. .|+.+|+.... .. ....+. ...+.+++..+ |+
T Consensus 320 i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l 392 (510)
T PRK15439 320 IMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRAL--NI 392 (510)
T ss_pred EEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHc--CC
Confidence 999999998776654 467899999996 3665 49999985320 10 011111 11123334433 33
Q ss_pred c-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCE
Q 000689 1212 K-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHV 1288 (1350)
Q Consensus 1212 d-t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~Dr 1288 (1350)
+ .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. |||
T Consensus 393 ~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~ 472 (510)
T PRK15439 393 KFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADR 472 (510)
T ss_pred CCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCE
Confidence 2 22344456799999999999999999999999999999999999999999999865 48999999999999976 999
Q ss_pred EEEEeCCeEEEecChhHHhhc
Q 000689 1289 IAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1289 I~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|++|++|+++..|+++++...
T Consensus 473 i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 473 VLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred EEEEECCEEEEEEccccCCHH
Confidence 999999999999999887643
No 83
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.3e-69 Score=613.62 Aligned_cols=535 Identities=25% Similarity=0.310 Sum_probs=457.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 103 LMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKM 182 (1350)
Q Consensus 103 ~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 182 (1350)
++.++++. .+..++....|.++-++-|.+....+ .+ .+..+.++.+++.++..++.+++.....+++.++..++
T Consensus 25 ~~~v~lfS-~~INiL~L~~~lyMLQVyDRVL~S~s-~~----TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L 98 (580)
T COG4618 25 FIGVGLFS-AVINLLALTGPLYMLQVYDRVLPSRS-VP----TLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQL 98 (580)
T ss_pred HHHHHHHH-HHHHHHHHhhhHHHHHHHhhhccCCC-cc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444443 34445555556667777787654322 11 22222333333444556778888889999999999999
Q ss_pred HHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000689 183 RIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISE-KLGNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLI 261 (1350)
Q Consensus 183 R~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~ 261 (1350)
...+|....+.+..-- ..|+=..-+ +|.++++.+++. .+..++...|+. +.+.++|.+++++.++.++...++
T Consensus 99 ~~~v~~a~~~~~l~~~----~~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P-~yl~v~fl~Hp~lG~~a~~ga~iL 172 (580)
T COG4618 99 NGPVFAASFSAPLLRR----GSGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMP-LYLAVIFLFHPWLGLIALAGAIIL 172 (580)
T ss_pred ccHHHHHHHhhHHhhc----CCCccccch-hhHHHHHHHHcCCCcchhcCCchHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987776532 334333334 699999999976 444555556664 457778888999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 262 AVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFV 341 (1350)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (1350)
+.+.++-.+..++-.++..+...+.+..++-+.+|.++|++.|+.....++|.+.+..+.....+.+-..+.+.+++..+
T Consensus 173 v~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~ 252 (580)
T COG4618 173 VVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRAL 252 (580)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 88888888888888888888899999999999999999999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCccC
Q 000689 342 VFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLEL 421 (1350)
Q Consensus 342 ~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~ 421 (1350)
-++....++..|+|++++|++|.|.+++....+.....|+-.....+.++..++.|.+|+.+++...|+.+ ...+.
T Consensus 253 Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~----~~m~L 328 (580)
T COG4618 253 RMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAA----ERMPL 328 (580)
T ss_pred HHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc----CCCCC
Confidence 88889999999999999999999999986555555666899999999999999999999999998776532 22455
Q ss_pred CCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH
Q 000689 422 DSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 422 ~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~ 501 (1350)
+..+|.+.++++++.-|+. ++++|+|+||++++||.+|||||||||||||.++|.|.++|.+|.|.+||-|++.++.+.
T Consensus 329 P~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~ 407 (580)
T COG4618 329 PAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQ 407 (580)
T ss_pred CCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHH
Confidence 6678999999999987754 578999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 502 LRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+-++|||.||+..||+|||+|||+-..++.+.+.+.+|++.++.||.|.+||+||||.+|+.|..|||||||||+|||||
T Consensus 408 lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAl 487 (580)
T COG4618 408 LGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARAL 487 (580)
T ss_pred hccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHH
Confidence 99999999999999999999999877778899999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|.||.+++||||-|+||.+.|..+.++|...+ +|.|+|+||||++.+..+|+|+||++|++...|+-+|.+++
T Consensus 488 YG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 488 YGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999999999886 59999999999999999999999999999999999998875
No 84
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.4e-69 Score=611.28 Aligned_cols=494 Identities=26% Similarity=0.373 Sum_probs=446.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHH
Q 000689 804 YLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVI 883 (1350)
Q Consensus 804 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~ 883 (1350)
.+.+++.++..++..++..++.+++.++...++..+|...++++..- +..|+= ...-+|.+++++++...-...
T Consensus 67 vlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~-----~~~g~~-~Q~LrDL~qvR~Fltg~g~~A 140 (580)
T COG4618 67 VLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLR-----RGSGDG-LQPLRDLDQVRQFLTGTGLTA 140 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhh-----cCCCcc-ccchhhHHHHHHHHcCCCcch
Confidence 34455556677888999999999999999999999999998766542 122221 123479999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHH
Q 000689 884 VQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMI 963 (1350)
Q Consensus 884 i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 963 (1350)
+.+..++-+++.++|.++++++++.++...+++...++.....++-.++..+.....+.+...+..|.++|++.|+....
T Consensus 141 ~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l 220 (580)
T COG4618 141 FFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNL 220 (580)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHH
Confidence 99999999999999999999999999988888888888888777777777777888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 964 VGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAP 1043 (1350)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1043 (1350)
.++|.+............+-..+...+++..+-.+..+.++..|+||+..|++|.|.+++.-+.......++-..+..+.
T Consensus 221 ~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wk 300 (580)
T COG4618 221 AKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWK 300 (580)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHH
Confidence 99999999998888888888888888999999999999999999999999999999998887777788889999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCC
Q 000689 1044 DFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCG 1123 (1350)
Q Consensus 1044 ~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSG 1123 (1350)
++..++.+..|+.+++...++..+. .+. |..+|.+.++++++.=|+. .+|+|+|+||++.|||.+|||||||||
T Consensus 301 q~~~Ar~s~~Rl~~lL~~~p~~~~~----m~L-P~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSG 374 (580)
T COG4618 301 QFVAARQSYKRLNELLAELPAAAER----MPL-PAPQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSG 374 (580)
T ss_pred HHHHHHHHHHHHHHHHHhCccccCC----CCC-CCCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCcc
Confidence 9999999999999999876654321 122 2357899999999976654 568999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHH
Q 000689 1124 KSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKF 1203 (1350)
Q Consensus 1124 KSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~ 1203 (1350)
||||.++|.|.+.|.+|.|.+||-|+++++.+.+-++|||.|||..||+|||+|||+-+.++.+++.|.+|++.|+.||.
T Consensus 375 KSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHel 454 (580)
T COG4618 375 KSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHEL 454 (580)
T ss_pred HHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHH
Confidence 99999999999999999999999999999999999999999999999999999999988788999999999999999999
Q ss_pred HhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchh
Q 000689 1204 ISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST 1282 (1350)
Q Consensus 1204 I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst 1282 (1350)
|.+||+||||.||++|..|||||||||+|||||+.+|.+++||||.|+||.+-|+.+.++|.... +|+|+|+||||++.
T Consensus 455 Il~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~ 534 (580)
T COG4618 455 ILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSA 534 (580)
T ss_pred HHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998865 69999999999999
Q ss_pred hhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1283 IRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1283 i~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+..+|+|+||++|++..+|+-+|.+++
T Consensus 535 L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 535 LASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred HhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999999876
No 85
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-70 Score=676.81 Aligned_cols=453 Identities=24% Similarity=0.361 Sum_probs=348.1
Q ss_pred EEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhccEEE
Q 000689 430 LKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQIGL 508 (1350)
Q Consensus 430 ~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~i~~ 508 (1350)
++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.+|++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 369999999999999999999999999999999999999999999999999876554 446778999
Q ss_pred EccCCCccc-ccHHHHhhcCCCC-----CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 509 VSQEPALFA-TTIKENILLGRPD-----ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 509 v~Q~~~lf~-~ti~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|+|++.++. .|++||+.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998775 4999999986421 11122111 223444554 6665666778899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y 660 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------ 224 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------ 224 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH------
Confidence 9999999999999999999999999998874 58999999999999865 999999999999987764332100
Q ss_pred HHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhhhhh
Q 000689 661 AKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKE 740 (1350)
Q Consensus 661 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1350)
.+.+
T Consensus 225 -~~~~--------------------------------------------------------------------------- 228 (491)
T PRK10982 225 -KIIA--------------------------------------------------------------------------- 228 (491)
T ss_pred -HHHH---------------------------------------------------------------------------
Confidence 0000
Q ss_pred hhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 741 QASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQ 820 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 820 (1350)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 821 HSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVL 900 (1350)
Q Consensus 821 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~ 900 (1350)
. ++....
T Consensus 229 -----------------~-----------~~~~~~--------------------------------------------- 235 (491)
T PRK10982 229 -----------------M-----------MVGRSL--------------------------------------------- 235 (491)
T ss_pred -----------------H-----------HhCCCc---------------------------------------------
Confidence 0 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000689 901 QWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFW 980 (1350)
Q Consensus 901 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 980 (1350)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000689 981 KGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLD 1060 (1350)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~ 1060 (1350)
.. .
T Consensus 236 ------------------------------------------------------------------------~~-----~ 238 (491)
T PRK10982 236 ------------------------------------------------------------------------TQ-----R 238 (491)
T ss_pred ------------------------------------------------------------------------cc-----c
Confidence 00 0
Q ss_pred ccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCcc
Q 000689 1061 RKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSG 1140 (1350)
Q Consensus 1061 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G 1140 (1350)
.+.+ + .. .....|+++|++++| .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|
T Consensus 239 ~~~~--~-~~-------~~~~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G 303 (491)
T PRK10982 239 FPDK--E-NK-------PGEVILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAG 303 (491)
T ss_pred cccc--c-CC-------CCCcEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCcc
Confidence 0000 0 00 001148999999975 1489999999999999999999999999999999999999999
Q ss_pred EEEECCccCCCCCHH-HhhcccEEEccCCc---cCc-ccHHHH-----hccCCC--C-CCHHHHHHHHHHhccHHHHhcC
Q 000689 1141 RVMIDGKDIRKYNLK-SLRRHMAIVPQEPC---LFA-STIYEN-----IAYGHE--S-ATESEIIEAARLANADKFISSL 1207 (1350)
Q Consensus 1141 ~I~iDG~di~~~~l~-~lR~~i~~VpQdp~---LF~-gTIreN-----L~~~~~--~-~td~ei~~al~~a~l~~~I~~l 1207 (1350)
+|.+||.++...+.. .+|+.++|+||++. +|. .|+++| +..... . .+..+..+ .+.+++..+
T Consensus 304 ~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~ 378 (491)
T PRK10982 304 TITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKS-----DTQWVIDSM 378 (491)
T ss_pred EEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHH-----HHHHHHHhc
Confidence 999999999876654 45778999999963 555 467666 332111 1 11111111 122333333
Q ss_pred CCCcc-ccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh
Q 000689 1208 PDGYK-TFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN 1285 (1350)
Q Consensus 1208 p~Gld-t~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~ 1285 (1350)
|+. -.......+||||||||++||||++.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+..
T Consensus 379 --~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~ 456 (491)
T PRK10982 379 --RVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLG 456 (491)
T ss_pred --CccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHh
Confidence 221 11344456799999999999999999999999999999999999999999998864 58999999999999865
Q ss_pred -cCEEEEEeCCeEEEecChhHH
Q 000689 1286 -AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1286 -~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|||+++|++|+++..++.+++
T Consensus 457 ~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 457 ITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred hCCEEEEEECCEEEEEEccccC
Confidence 999999999999988876543
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.5e-69 Score=667.85 Aligned_cols=453 Identities=23% Similarity=0.320 Sum_probs=346.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 5899999999974 3599999999999999999999999999999999999999999999999888776766777789
Q ss_pred EEEccCCCc--c-------cccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 507 GLVSQEPAL--F-------ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 507 ~~v~Q~~~l--f-------~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
+|++|++.+ + ..|++||+.++.. ..+++. +.+..+ |++........+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK--DPARCE---------QLAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh--HHHHHH---------HHHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 3588998865310 111222 233333 55555667778999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+.+|++|||||||++||+++.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 225 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ- 225 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc-
Confidence 999999999999999999999999999999998875 47899999999999876 999999999999998887665421
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhh
Q 000689 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
.....+...
T Consensus 226 --~~~~~~~~~--------------------------------------------------------------------- 234 (490)
T PRK10938 226 --ALVAQLAHS--------------------------------------------------------------------- 234 (490)
T ss_pred --hhhhhhhhh---------------------------------------------------------------------
Confidence 000000000
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000689 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
T Consensus 235 -------------------------------------------------------------------------------- 234 (490)
T PRK10938 235 -------------------------------------------------------------------------------- 234 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~ 895 (1350)
+ . .... +
T Consensus 235 ---------------------~---------~--~~~~-~---------------------------------------- 241 (490)
T PRK10938 235 ---------------------E---------Q--LEGV-Q---------------------------------------- 241 (490)
T ss_pred ---------------------h---------c--cCcc-c----------------------------------------
Confidence 0 0 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000689 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v 1055 (1350)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000689 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1135 (1350)
.+...++....... ....-|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+.
T Consensus 242 -----~~~~~~~~~~~~~~---~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~ 310 (490)
T PRK10938 242 -----LPEPDEPSARHALP---ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDH 310 (490)
T ss_pred -----cCcccccccccccC---CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCC
Confidence 00000000000000 00124999999999963 35999999999999999999999999999999999988
Q ss_pred CC-CccEEEECCccCCC-CCHHHhhcccEEEccCCccCc---ccHHHHhccCCC-------CCC---HHHHHHHHHHhcc
Q 000689 1136 EP-SSGRVMIDGKDIRK-YNLKSLRRHMAIVPQEPCLFA---STIYENIAYGHE-------SAT---ESEIIEAARLANA 1200 (1350)
Q Consensus 1136 ~p-~~G~I~iDG~di~~-~~l~~lR~~i~~VpQdp~LF~---gTIreNL~~~~~-------~~t---d~ei~~al~~a~l 1200 (1350)
+| ++|+|.++|.++.. .+...+|++|+|++|++.++. .|+++++.++.. ... ++++.++++..++
T Consensus 311 ~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 390 (490)
T PRK10938 311 PQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGI 390 (490)
T ss_pred CcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCC
Confidence 75 69999999987632 234456889999999987642 467777653211 011 1234455555554
Q ss_pred HHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CC-ceEEEEec
Q 000689 1201 DKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SG-KTTIVVAH 1278 (1350)
Q Consensus 1201 ~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g-~TvI~IaH 1278 (1350)
.+. .......+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. ++ .|||+|||
T Consensus 391 ~~~----------~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsH 460 (490)
T PRK10938 391 DKR----------TADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSH 460 (490)
T ss_pred chh----------hccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEec
Confidence 320 2233345799999999999999999999999999999999999999999999875 34 47999999
Q ss_pred Cchhhhh--cCEEEEEeCCeEEEec
Q 000689 1279 RLSTIRN--AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1279 Rlsti~~--~DrI~Vl~~GrIvE~G 1301 (1350)
+++.+.. ||+|++|++|+|++.-
T Consensus 461 d~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 461 HAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred chhhhhhhhheeEEEecCCceEEee
Confidence 9999964 7999999999998753
No 87
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.4e-67 Score=705.27 Aligned_cols=212 Identities=22% Similarity=0.395 Sum_probs=181.4
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHh
Q 000689 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~iDG~di~~~~l~~l 1157 (1350)
.++++||++.|+.++ ++++|+|||++|+|||++||+||||||||||+++|.|+.+ |++|+|++||+++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3479999999999999999999999999999999999997 78899999999985 257
Q ss_pred hcccEEEccCCc-cCcccHHHHhccCC----C-CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1158 RRHMAIVPQEPC-LFASTIYENIAYGH----E-SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1158 R~~i~~VpQdp~-LF~gTIreNL~~~~----~-~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
|++++||||++. ++..|+||||.++. + +.++++ +.++++..++. +..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~-------~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEME-------SYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhCCCeeCCCCCCCCHHHh
Confidence 899999999975 55679999998642 1 234433 34455555543 4578999988889999999
Q ss_pred HHHHHHHHhccCCC-EEEEeCcCCCCCHHHHHHHHHHHHHh-cCCceEEEEecCchhh--hhcCEEEEEeCC-eEEEecC
Q 000689 1228 QRVAIARAFVRKAE-IMLLDEATSALDAESERSVQEALDRA-CSGKTTIVVAHRLSTI--RNAHVIAVIDDG-KVAELGS 1302 (1350)
Q Consensus 1228 QrlaiARALLr~p~-ILlLDEaTSaLD~~te~~I~~~L~~~-~~g~TvI~IaHRlsti--~~~DrI~Vl~~G-rIvE~Gt 1302 (1350)
||++|||||+.+|+ ||+||||||+||+.+...|++.|++. .+|+|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999987 4689999999999974 569999999997 9999998
Q ss_pred hh
Q 000689 1303 HS 1304 (1350)
Q Consensus 1303 ~~ 1304 (1350)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 88
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.1e-66 Score=649.25 Aligned_cols=524 Identities=17% Similarity=0.194 Sum_probs=399.7
Q ss_pred HHhhchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 93 FRFADSLDYVLMAIGSLGAFVHGCSFPI-FLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSWAEISCW 171 (1350)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (1350)
++|.+++++. ++++++++++..++... .|++.+.++|.... +.. .+.. ++++.++.+++.++..++.
T Consensus 5 ~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~---~~~----~~~~----~~~~~~~~~~~~~~~~~~~ 72 (547)
T PRK10522 5 RLVWRQYRWP-FISVMALSLASAALGIGLIAFINQRLIETADT---SLL----VLPE----FLGLLLLLMAVTLGSQLAL 72 (547)
T ss_pred HHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cch----HHHH----HHHHHHHHHHHHHHHHHHH
Confidence 3455555443 34455555555554443 34555677775421 111 1111 1112222345667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000689 172 MWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFSAVWQLA 251 (1350)
Q Consensus 172 ~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 251 (1350)
.+++.++..++|.++|++++++|++||+++ ++|++++|+++|++.+...+. .+..++..++.+++.++++++++|.++
T Consensus 73 ~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~ 150 (547)
T PRK10522 73 TTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKML 150 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 899999999999999999999999999998 999999999999999998765 467788888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHHH
Q 000689 252 LVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGE---SKALQAYSSALKVAQRLGYKSG 328 (1350)
Q Consensus 252 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e---~~~~~~~~~~~~~~~~~~~~~~ 328 (1350)
+++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+..
T Consensus 151 li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (547)
T PRK10522 151 LVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRAD 229 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHH
Confidence 99999999998888888888888888889999999999999999999996 5544 4567888888877777666655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000689 329 FAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHK 408 (1350)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~ 408 (1350)
........+..++..+...+++++++... ..+.+.+..+.++......|+..+...+..++.++.+.+|+.++++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~ 306 (547)
T PRK10522 230 TFHLSAVNWSNIMMLGAIGLVFYMANSLG---WADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAP 306 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 54444333333332222333344443321 123333333333334445688899999999999999999999997654
Q ss_pred CCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 000689 409 PSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVL 488 (1350)
Q Consensus 409 ~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 488 (1350)
++.+. + ..... +..+.|+++||+|+|+++ .++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|.
T Consensus 307 ~~~~~-~-~~~~~-~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~ 381 (547)
T PRK10522 307 YKAEF-P-RPQAF-PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEIL 381 (547)
T ss_pred ccccc-c-ccccc-CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE
Confidence 32211 1 11111 113579999999999742 3699999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 489 LDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 489 i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
+||+++++++.+++|++|+||+|||.+|++|++|| + ++.++++++++++..++.+++. .|+|. .+|.+||
T Consensus 382 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LS 451 (547)
T PRK10522 382 LDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLS 451 (547)
T ss_pred ECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCC
Confidence 99999999999999999999999999999999999 2 3455666666666555544432 12221 1378999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEe-
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI- 645 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~- 645 (1350)
||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|.
T Consensus 452 gGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~ 531 (547)
T PRK10522 452 KGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELT 531 (547)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEec
Confidence 999999999999999999999999999999999999999987654 48999999999999999999999999999987
Q ss_pred cChH
Q 000689 646 GTHD 649 (1350)
Q Consensus 646 g~~~ 649 (1350)
|++.
T Consensus 532 ~~~~ 535 (547)
T PRK10522 532 GEER 535 (547)
T ss_pred CCch
Confidence 4443
No 89
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-67 Score=658.55 Aligned_cols=483 Identities=21% Similarity=0.354 Sum_probs=345.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ..|
T Consensus 1 ml~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i 66 (530)
T PRK15064 1 MLSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERL 66 (530)
T ss_pred CEEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 3789999999963 36999999999999999999999999999999999999999999999973 369
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC----------------CHH---HHHHH----------HHHhchHHHHhcCCCCc
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA----------------DLN---EIEEA----------ARVANAYSFIIKLPDGF 556 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~----------------~~~---~~~~~----------~~~~~~~~~i~~lp~g~ 556 (1350)
|||+|++.+|.. |++||+.++.... ..+ .+.+. .....+.+.+..+ |+
T Consensus 67 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl 144 (530)
T PRK15064 67 GKLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GI 144 (530)
T ss_pred EEEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CC
Confidence 999999988765 9999998753100 000 00000 0012234455555 55
Q ss_pred cchh-cCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE
Q 000689 557 DTQV-RERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVV 634 (1350)
Q Consensus 557 ~t~~-~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i 634 (1350)
+... .....+||||||||++|||||+.+|++|||||||++||+++...+.+.|.+ .++|+|+|||+++.+.. ||+|
T Consensus 145 ~~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i 222 (530)
T PRK15064 145 PEEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHM 222 (530)
T ss_pred ChhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceE
Confidence 5433 345689999999999999999999999999999999999999999999874 48999999999999876 9999
Q ss_pred EEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCcccccc
Q 000689 635 AVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLS 713 (1350)
Q Consensus 635 ~vl~~G~i~-~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1350)
++|++|+++ +.|++++.++.. ...+....+....
T Consensus 223 ~~l~~g~i~~~~g~~~~~~~~~-~~~~~~~~~~~~~-------------------------------------------- 257 (530)
T PRK15064 223 ADLDYGELRVYPGNYDEYMTAA-TQARERLLADNAK-------------------------------------------- 257 (530)
T ss_pred EEEeCCEEEEecCCHHHHHHHH-HHHHHHHHHHHHH--------------------------------------------
Confidence 999999994 788887765420 0000000000000
Q ss_pred CCccCcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchh
Q 000689 714 DFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHA 793 (1350)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1350)
...+ .+.
T Consensus 258 -----------------~~~~----------~~~---------------------------------------------- 264 (530)
T PRK15064 258 -----------------KKAQ----------IAE---------------------------------------------- 264 (530)
T ss_pred -----------------HHHH----------HHH----------------------------------------------
Confidence 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHH
Q 000689 794 YMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVR 873 (1350)
Q Consensus 794 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~ 873 (1350)
+++ ... +. . ...
T Consensus 265 -----------------------------------------~~~-~~~---~~-----~---~~~--------------- 276 (530)
T PRK15064 265 -----------------------------------------LQS-FVS---RF-----S---ANA--------------- 276 (530)
T ss_pred -----------------------------------------HHH-HHH---Hh-----h---ccc---------------
Confidence 000 000 00 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHH
Q 000689 874 SAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRT 953 (1350)
Q Consensus 874 ~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~t 953 (1350)
..
T Consensus 277 ---------------------------------------------------------~~--------------------- 278 (530)
T PRK15064 277 ---------------------------------------------------------SK--------------------- 278 (530)
T ss_pred ---------------------------------------------------------hh---------------------
Confidence 00
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Q 000689 954 VAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSAN 1033 (1350)
Q Consensus 954 Ira~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 1033 (1350)
+ ....
T Consensus 279 --~---------------~~~~---------------------------------------------------------- 283 (530)
T PRK15064 279 --A---------------KQAT---------------------------------------------------------- 283 (530)
T ss_pred --h---------------HHHH----------------------------------------------------------
Confidence 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hcccccCCCCCCCCCC-CCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeC
Q 000689 1034 GAAETLTLAPDFIKGGRAMRSVFDL--LDRKTEIEPDDPDATP-VPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARA 1110 (1350)
Q Consensus 1034 ~~~~~~~~~~~~~~~~~a~~~v~~~--~~~~~~~~~~~~~~~~-~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~ 1110 (1350)
....++.+. ...++..........+ .+...+..|+++||+++|+. .++|+|+||+|++
T Consensus 284 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~ 344 (530)
T PRK15064 284 ----------------SRAKQIDKIKLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEA 344 (530)
T ss_pred ----------------HHHHHHhhccccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECC
Confidence 000000000 0000000000000000 00001235999999999964 3699999999999
Q ss_pred CCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCc--cCc-ccHHHHhccCC-CCC
Q 000689 1111 GKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPC--LFA-STIYENIAYGH-ESA 1186 (1350)
Q Consensus 1111 Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~--LF~-gTIreNL~~~~-~~~ 1186 (1350)
||++||+||||||||||+++|.|+++|++|+|.++| +.+++|+||++. ++. .|+++|+.... ...
T Consensus 345 Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~ 413 (530)
T PRK15064 345 GERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGD 413 (530)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCc
Confidence 999999999999999999999999999999999998 357999999984 443 59999997432 222
Q ss_pred CHHHHHHHHHHhccH-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHH
Q 000689 1187 TESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALD 1265 (1350)
Q Consensus 1187 td~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~ 1265 (1350)
.++++.+.++..++. +.. .....+||||||||++||||++.+|+||||||||++||+.+...+.+.|+
T Consensus 414 ~~~~~~~~l~~~~l~~~~~-----------~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~ 482 (530)
T PRK15064 414 DEQAVRGTLGRLLFSQDDI-----------KKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALE 482 (530)
T ss_pred cHHHHHHHHHHcCCChhHh-----------cCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 345566677776652 222 23346799999999999999999999999999999999999999999998
Q ss_pred HhcCCceEEEEecCchhhhh-cCEEEEEeCCeEE-EecChhHHhhc
Q 000689 1266 RACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLLKN 1309 (1350)
Q Consensus 1266 ~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv-E~Gt~~eLl~~ 1309 (1350)
+. +.|||+|||+++.+.. ||||++|++|+++ +.|++++++..
T Consensus 483 ~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 483 KY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 86 4599999999999876 9999999999998 78999998765
No 90
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.9e-66 Score=647.21 Aligned_cols=483 Identities=24% Similarity=0.347 Sum_probs=338.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-----------~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-----------IKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 6999999999962 246999999999999999999999999999999999999999999999752 369
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC----------------CH----------HHHHHHHHH-------hchHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA----------------DL----------NEIEEAARV-------ANAYSFIIKL 552 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~----------------~~----------~~~~~~~~~-------~~~~~~i~~l 552 (1350)
|||+|+|.+++. |++||+.++.... .. .++.+.... ..+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999865 9999998763100 00 001111111 1122333443
Q ss_pred CCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-c
Q 000689 553 PDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-A 631 (1350)
Q Consensus 553 p~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 631 (1350)
|++ .......+||||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 443 2456677999999999999999999999999999999999999999999998863 599999999999976 9
Q ss_pred CEEEEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccc
Q 000689 632 DVVAVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR 710 (1350)
Q Consensus 632 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1350)
|+|++|++|+++ ..|++++..+.. ..+........
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~---------~~~~~~~~~~~----------------------------------- 263 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQK---------AKRLAQEEKQE----------------------------------- 263 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHH---------HHHHHHHHHHH-----------------------------------
Confidence 999999999986 678777664320 00000000000
Q ss_pred cccCCccCcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000689 711 RLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP 790 (1350)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1350)
+. .
T Consensus 264 -----------------------~~---------~--------------------------------------------- 266 (556)
T PRK11819 264 -----------------------AA---------R--------------------------------------------- 266 (556)
T ss_pred -----------------------HH---------H---------------------------------------------
Confidence 00 0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHH
Q 000689 791 DHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDAN 870 (1350)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~ 870 (1350)
...+++ +. .|..
T Consensus 267 -----------------------------------------~~~~~~-~~--------~~~~------------------ 278 (556)
T PRK11819 267 -----------------------------------------QKALKR-EL--------EWVR------------------ 278 (556)
T ss_pred -----------------------------------------HHHHHH-HH--------HHHH------------------
Confidence 000000 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHcc
Q 000689 871 NVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGN 950 (1350)
Q Consensus 871 ~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 950 (1350)
+ . ...
T Consensus 279 ------------------------------------------------------------~----~-~~~---------- 283 (556)
T PRK11819 279 ------------------------------------------------------------Q----S-PKA---------- 283 (556)
T ss_pred ------------------------------------------------------------H----h-hhh----------
Confidence 0 0 000
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 000689 951 VRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV 1030 (1350)
Q Consensus 951 i~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 1030 (1350)
+.-..+ ..
T Consensus 284 ----~~~~~~------------~~-------------------------------------------------------- 291 (556)
T PRK11819 284 ----RQAKSK------------AR-------------------------------------------------------- 291 (556)
T ss_pred ----hHHHHH------------HH--------------------------------------------------------
Confidence 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC-CCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEe
Q 000689 1031 SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP-DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRAR 1109 (1350)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~ 1109 (1350)
....++..+ ..+.+.+. ......+.+...+.-|+++||+++|++ .++|+|+||+|+
T Consensus 292 ------------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~ 348 (556)
T PRK11819 292 ------------------LARYEELLS--EEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLP 348 (556)
T ss_pred ------------------HHHHHHhhc--ccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEc
Confidence 000000000 00000000 000000000011235999999999964 369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCC-ccCc-ccHHHHhccCCCC--
Q 000689 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEP-CLFA-STIYENIAYGHES-- 1185 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp-~LF~-gTIreNL~~~~~~-- 1185 (1350)
+||++||+|+||||||||+++|.|+++|++|+|.+++ ++ +|+||||++ .++. -|++||+.++...
T Consensus 349 ~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 417 (556)
T PRK11819 349 PGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIK 417 (556)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhccccc
Confidence 9999999999999999999999999999999999954 21 699999997 5654 5999999865321
Q ss_pred --CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHH
Q 000689 1186 --ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1186 --~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
..+.+..++++..++.+ .........||||||||++||||++.+|++|||||||++||+.+...+.+.
T Consensus 418 ~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 487 (556)
T PRK11819 418 VGNREIPSRAYVGRFNFKG----------GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEA 487 (556)
T ss_pred ccccHHHHHHHHHhCCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHH
Confidence 11223333444444321 012333457999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEecCchhhhh-cCEEEEEeC-CeEEE-ecChhHHhhc
Q 000689 1264 LDRACSGKTTIVVAHRLSTIRN-AHVIAVIDD-GKVAE-LGSHSHLLKN 1309 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~-GrIvE-~Gt~~eLl~~ 1309 (1350)
|++. .+ |+|+|||+++.+.. ||+|++|++ |++.+ .|+++++++.
T Consensus 488 l~~~-~~-tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 488 LLEF-PG-CAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHhC-CC-eEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 9986 34 99999999999876 999999986 88874 7888877654
No 91
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-65 Score=641.98 Aligned_cols=482 Identities=24% Similarity=0.352 Sum_probs=336.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 6899999999962 23699999999999999999999999999999999999999999999975 2469
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC-----------------CCH---------HHHHHHHHHhc-------hHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD-----------------ADL---------NEIEEAARVAN-------AYSFIIKL 552 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~-----------------~~~---------~~~~~~~~~~~-------~~~~i~~l 552 (1350)
|||+|+|.+++. |++|||.++... ... .++.++.+.++ +.+.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998864 999999875311 000 11222222222 22233333
Q ss_pred CCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-c
Q 000689 553 PDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-A 631 (1350)
Q Consensus 553 p~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~ 631 (1350)
|++. ......+||||||||++|||||+.+|++|||||||++||+++...+.+.|+++ +.|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4421 35567899999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCCEEE-EecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccc
Q 000689 632 DVVAVLQQGSVS-EIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSR 710 (1350)
Q Consensus 632 d~i~vl~~G~i~-~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 710 (1350)
|+|++|++|+++ ..|++++.++.. ..+........
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~---------~~~~~~~~~~~----------------------------------- 261 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQK---------EKRLEQEEKEE----------------------------------- 261 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHH---------HHHHHHHHHHH-----------------------------------
Confidence 999999999976 668777665320 00000000000
Q ss_pred cccCCccCcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 000689 711 RLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP 790 (1350)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (1350)
.+
T Consensus 262 --------------------~~---------------------------------------------------------- 263 (552)
T TIGR03719 262 --------------------SA---------------------------------------------------------- 263 (552)
T ss_pred --------------------HH----------------------------------------------------------
Confidence 00
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHH
Q 000689 791 DHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDAN 870 (1350)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~ 870 (1350)
..+.+ .|..
T Consensus 264 --------------------------------------------~~~~~-----------------------~~~~---- 272 (552)
T TIGR03719 264 --------------------------------------------RQKAL-----------------------KREL---- 272 (552)
T ss_pred --------------------------------------------HHHHH-----------------------HHHH----
Confidence 00000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHcc
Q 000689 871 NVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGN 950 (1350)
Q Consensus 871 ~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g 950 (1350)
.| + + +.. ...
T Consensus 273 ------------------------------~~------------------~-----~---~~~---------~~~----- 282 (552)
T TIGR03719 273 ------------------------------EW------------------V-----R---SSP---------KAR----- 282 (552)
T ss_pred ------------------------------HH------------------H-----H---hhh---------hhH-----
Confidence 00 0 0 000 000
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Q 000689 951 VRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMV 1030 (1350)
Q Consensus 951 i~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 1030 (1350)
++ ..+ ....
T Consensus 283 ----~~-~~~-~~~~----------------------------------------------------------------- 291 (552)
T TIGR03719 283 ----QA-KSK-ARLA----------------------------------------------------------------- 291 (552)
T ss_pred ----HH-HHH-HHHH-----------------------------------------------------------------
Confidence 00 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCC-CCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEe
Q 000689 1031 SANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIE-PDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRAR 1109 (1350)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~ 1109 (1350)
..++..+ ..++..+ .........+...+.-|+++|++++|++ .++|+|+||+|+
T Consensus 292 --------------------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~ 346 (552)
T TIGR03719 292 --------------------RYEELLS--QEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLP 346 (552)
T ss_pred --------------------HHHhhhh--hcccccCCCceeecCCCCCCCCeEEEEeeEEEEECC---eeeeccceEEEc
Confidence 0000000 0000000 0000000000011235999999999964 369999999999
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCc-cCc-ccHHHHhccCCCC--
Q 000689 1110 AGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPC-LFA-STIYENIAYGHES-- 1185 (1350)
Q Consensus 1110 ~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~-LF~-gTIreNL~~~~~~-- 1185 (1350)
+||++||+|+||||||||+++|.|+.+|++|+|.+++ ++ +|+|+||++. ++. .|++||+.++...
T Consensus 347 ~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~ 415 (552)
T TIGR03719 347 PGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQ 415 (552)
T ss_pred CCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccc
Confidence 9999999999999999999999999999999999954 21 6999999973 554 5999999875321
Q ss_pred CC--HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHH
Q 000689 1186 AT--ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEA 1263 (1350)
Q Consensus 1186 ~t--d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~ 1263 (1350)
.. +.+..++++..++.+. ........||||||||++|||||+.+|++|||||||++||+.+...+.+.
T Consensus 416 ~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 485 (552)
T TIGR03719 416 LGKREVPSRAYVGRFNFKGS----------DQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEA 485 (552)
T ss_pred cCcchHHHHHHHHhCCCChh----------HhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Confidence 11 2223333333333210 12334467999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEEEEecCchhhhh-cCEEEEEeC-CeEE-EecChhHHhh
Q 000689 1264 LDRACSGKTTIVVAHRLSTIRN-AHVIAVIDD-GKVA-ELGSHSHLLK 1308 (1350)
Q Consensus 1264 L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~-GrIv-E~Gt~~eLl~ 1308 (1350)
|++.. + |||+|||+++.+.. ||+|++|++ |+++ ..|+++++++
T Consensus 486 l~~~~-~-~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 486 LLEFA-G-CAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred HHHCC-C-eEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 99863 3 89999999999876 999999997 6877 4577776654
No 92
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-64 Score=630.36 Aligned_cols=471 Identities=19% Similarity=0.247 Sum_probs=372.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 813 ELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLV 892 (1350)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~ 892 (1350)
..++.++..++..+++.++..++|.++|+++++.|++||++ +++|++++|+++|++.+...+. .+..++..++.+++
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~--~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~ 137 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQ--LGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLG 137 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhc--cCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 34566788889999999999999999999999999999985 7899999999999999998765 46777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhH---HHHHHHHHH
Q 000689 893 ACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSE---LMIVGLFSS 969 (1350)
Q Consensus 893 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e---~~~~~~~~~ 969 (1350)
+++++++++|++++++++++|+.++..+...+..+...++.++...+..+++.|.++|+++++ ++.+ +.+.++|.+
T Consensus 138 ~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~ 216 (547)
T PRK10522 138 SAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEP 216 (547)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhH
Confidence 999999999999999999998887766666666666667777888889999999999999995 4433 456777777
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 970 NLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGG 1049 (1350)
Q Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1350)
..+...+...+..........+......+..++.++++..+ +..+.+....+.........++..+......+..+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~ 293 (547)
T PRK10522 217 DAQEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFYMANSL---GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQ 293 (547)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665554444333333222222222222233333333322 112222222222333334567888888889999999
Q ss_pred HHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHH
Q 000689 1050 RAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIA 1129 (1350)
Q Consensus 1050 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~ 1129 (1350)
.+.+|+.++++.+++.+.. ...+. +..+.|+|+||+|+||++ .++|+|+||+|+|||++||||+||||||||++
T Consensus 294 ~a~~ri~~l~~~~~~~~~~--~~~~~--~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 294 VAFNKLNKLALAPYKAEFP--RPQAF--PDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHhccccccccc--ccccc--CcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999987544322111 11111 123579999999999743 36999999999999999999999999999999
Q ss_pred HHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCC
Q 000689 1130 LVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPD 1209 (1350)
Q Consensus 1130 lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~ 1209 (1350)
+|+|+|+|++|+|++||+|+++++.+++|++++||||||.+|++|+++| + ++.++++++++++.+++.+++.. |+
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~ 442 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-ED 442 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cc
Confidence 9999999999999999999999999999999999999999999999999 2 45788888888888888776653 44
Q ss_pred CccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcC
Q 000689 1210 GYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAH 1287 (1350)
Q Consensus 1210 Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~D 1287 (1350)
|. .+|.+||||||||++||||++++|+|||||||||+||+++|+.+.+.+.+.. .|+|+|+||||++++..||
T Consensus 443 ~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 443 GR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred cC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 42 1478999999999999999999999999999999999999999999997654 4899999999999999999
Q ss_pred EEEEEeCCeEEEe-cChhHH
Q 000689 1288 VIAVIDDGKVAEL-GSHSHL 1306 (1350)
Q Consensus 1288 rI~Vl~~GrIvE~-Gt~~eL 1306 (1350)
+|++|++|+++|. |++.+-
T Consensus 518 ~i~~l~~G~i~e~~~~~~~~ 537 (547)
T PRK10522 518 RLLEMRNGQLSELTGEERDA 537 (547)
T ss_pred EEEEEECCEEEEecCCchhh
Confidence 9999999999987 555443
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.6e-64 Score=637.77 Aligned_cols=531 Identities=15% Similarity=0.108 Sum_probs=441.0
Q ss_pred hHHHHHHhhchhhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 88 GLGELFRFADSLDY----VLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWAS 163 (1350)
Q Consensus 88 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1350)
.++++++|+.|+++ ..+++.+++.++...+....|++.+.++|.+... +...+...+..++++++++.++..+.
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~--~~~~f~~~l~~~~l~~~~~~~~~~~~ 155 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRR--SPRNFAWILFKWFLIAPPASFINSAI 155 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667888877653 2556667777777788888899999999986532 12223322333444444455556667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 164 SWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVG 243 (1350)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1350)
.++..++......++..++|.++|++....++.|||+ ++|++++|+++|++.+.+.+...+..++..++.+++.++++
T Consensus 156 ~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L 233 (659)
T TIGR00954 156 KYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKL 233 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777788888899999999999999999999999985 68999999999999999999999999999999999888877
Q ss_pred HH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHHHHHHHHHHHHHHH
Q 000689 244 FS-AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQR 322 (1350)
Q Consensus 244 ~~-~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~ 322 (1350)
+. ++|.+++++++.+|+.+++..++.+++.+...+.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+
T Consensus 234 ~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~ 313 (659)
T TIGR00954 234 LTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVE 313 (659)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH-h----cccCHHHHHH-HHHH---HHHHHHHHHHHHHHHHHH
Q 000689 323 LGYKSGFAKGMGLGATYFVVFC--SYALLLWYGGYLVR-H----HFTNGGLAIA-TMFA---VMIGGLALAQAAPSISAF 391 (1350)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----g~~~~g~~~~-~~~~---~~~~~~~l~~~~~~~~~~ 391 (1350)
...+.....+...++..++... ..+++++.|...+. . |.+|.|.+++ ++.+ +.....|+..+...+..+
T Consensus 314 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 314 HLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888887776542 33333344443332 2 6889888776 3333 334467889999999999
Q ss_pred HHHHHHHHHHHHHHccCCCCCCC-------CC--CC-------------ccCCCCcceEEEEEEEEECCCCCCCccccce
Q 000689 392 AKAKVAAAKIFRIIDHKPSIDRN-------SE--SG-------------LELDSVSGLIELKHVDFSYPSRPEVRILNNF 449 (1350)
Q Consensus 392 ~~~~~s~~ri~~~l~~~~~~~~~-------~~--~~-------------~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i 449 (1350)
+++.++.+|++++++.+++++.. +. +. .......+.|+++||+|+|+++ .++|+|+
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~i 471 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESL 471 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecc
Confidence 99999999999999764332100 00 00 0011234679999999999742 3699999
Q ss_pred EEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCC-
Q 000689 450 SLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGR- 528 (1350)
Q Consensus 450 ~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~- 528 (1350)
||++++||+++|+||||||||||+++|+|+++|++|+|.+++ |++++||||+|++|++|++|||.++.
T Consensus 472 sl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~ 540 (659)
T TIGR00954 472 SFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDS 540 (659)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCC
Confidence 999999999999999999999999999999999999999874 56899999999999999999999974
Q ss_pred ------CCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHH
Q 000689 529 ------PDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESE 602 (1350)
Q Consensus 529 ------~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~ 602 (1350)
+..++++++++++.+++++++.. |.|+||..+ .+.+||||||||++||||++++|++||||||||+||++++
T Consensus 541 ~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~ 618 (659)
T TIGR00954 541 SEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVE 618 (659)
T ss_pred hhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHH
Confidence 33567788999999999999887 999999876 5779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 000689 603 KLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQ 639 (1350)
Q Consensus 603 ~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~ 639 (1350)
+.+.+.+++. |+|+|+||||+++++.||+|++|+.
T Consensus 619 ~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 619 GYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 9999999774 8999999999999999999999973
No 94
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-64 Score=637.09 Aligned_cols=200 Identities=25% Similarity=0.338 Sum_probs=165.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 36999999999999999999999999999999999999999999999741 269
Q ss_pred EEEccCC--ccCc-ccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1162 AIVPQEP--CLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp--~LF~-gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
+|++|++ .++. .|+.+++....+...++++.+.++..++... .+......||||||||++||||++.
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~----------~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGD----------KVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChh----------HhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3433 4788887422222234455555555554210 1222345799999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEE-EecChhHHh
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLL 1307 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv-E~Gt~~eLl 1307 (1350)
+|+||||||||++||+.+...+.+.|++. .| |||+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~g-tvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-EG-ALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-CC-eEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 99999999999999999999999999986 44 99999999999976 9999999999998 678888774
No 95
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.1e-63 Score=661.90 Aligned_cols=213 Identities=23% Similarity=0.361 Sum_probs=177.4
Q ss_pred cEEEEEEEEECCCC----------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC--CccEEEECCccC
Q 000689 1082 EVELKHVDFSYPSR----------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP--SSGRVMIDGKDI 1149 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~----------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~iDG~di 1149 (1350)
.+.|+||++.++.. ....+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 69999999998532 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCCHHHhhcccEEEccCCccCc-ccHHHHhccCC----C-CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCC
Q 000689 1150 RKYNLKSLRRHMAIVPQEPCLFA-STIYENIAYGH----E-SATESE----IIEAARLANADKFISSLPDGYKTFVGERG 1219 (1350)
Q Consensus 1150 ~~~~l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~----~-~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G 1219 (1350)
.. ..+|+.+|||+|++.++. .|++|||.+.. + +.++++ +.+.++..++.+ -.|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~-------~~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN-------LKDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh-------HhCCccCCCC
Confidence 43 456788999999998775 59999998642 1 233332 455566666544 3467777544
Q ss_pred -CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchh-h-hhcCEEEEEeC-
Q 000689 1220 -VQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLST-I-RNAHVIAVIDD- 1294 (1350)
Q Consensus 1220 -~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlst-i-~~~DrI~Vl~~- 1294 (1350)
..||||||||++|||+|+.+|+||+||||||+||+.+...|.+.|++.. +|+|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999875 58999999999984 4 56999999996
Q ss_pred CeEEEecChh
Q 000689 1295 GKVAELGSHS 1304 (1350)
Q Consensus 1295 GrIvE~Gt~~ 1304 (1350)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999864
No 96
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.5e-62 Score=621.72 Aligned_cols=200 Identities=26% Similarity=0.445 Sum_probs=163.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|+++||+++|++ .++|+|+||+|++|+++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4899999999964 36999999999999999999999999999999999999999999999 5432 59
Q ss_pred EEEccCC-ccCc-ccHHHHhccCCCCC--C--HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1162 AIVPQEP-CLFA-STIYENIAYGHESA--T--ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1162 ~~VpQdp-~LF~-gTIreNL~~~~~~~--t--d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
+|++|++ .++. .|+.+|+.++.+.. . +.++.+.++..++.. +..+.+ ...||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~----~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHP------KRAMTP----VKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCH------HHHhCh----hhhCCHHHHHHHHHHHH
Confidence 9999986 4554 49999998653321 1 233344444433311 112333 35699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe-CCeEEEe-cChhHHh
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID-DGKVAEL-GSHSHLL 1307 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~-~GrIvE~-Gt~~eLl 1307 (1350)
++.+|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|+|+++ |++++-+
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 99999999999999999999999999999875 4599999999999865 99999998 8999874 6666654
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.4e-63 Score=622.74 Aligned_cols=200 Identities=26% Similarity=0.392 Sum_probs=165.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 59999999999632 3599999999999999999999999999999999999999999999975 3579
Q ss_pred EEEccCCccCcccHHHHhcc----CCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1162 AIVPQEPCLFASTIYENIAY----GHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~----~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
+|+||++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 22345555321 11234567777778777775321 12234679999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEE-EecChhHHh
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA-ELGSHSHLL 1307 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv-E~Gt~~eLl 1307 (1350)
.+|++|||||||++||+.+...+.+.|++. ++ |+|+|||++..+.. ||+|++|++|+++ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~g-tvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-QG-GVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-CC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 44 99999999999976 9999999999998 578877653
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-63 Score=579.17 Aligned_cols=452 Identities=28% Similarity=0.442 Sum_probs=355.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH-HHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR-WLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~-~~r~~ 505 (1350)
.++++|++++|++ .++|+|+||++.+||++||+|.||||||||+|+|+|.|+|++|+|.+||++....++. .....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 5899999999974 4699999999999999999999999999999999999999999999999999877765 56678
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCC------HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDAD------LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~------~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
|+.|+||..|++. ||.|||.+|+.... ..++.+.+ .+.+..+ |.+........+||+||||-|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A-----~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA-----RELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH-----HHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999966 99999999986432 23333332 2334434 332224455568999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh-HHHHhcc
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH-DELIAKG 655 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~-~~l~~~~ 655 (1350)
||+..+++|||||||||+|+....+.+.+.+++++ +|.++|+||||++.+.. ||||.||.||+.+..++. .++-.
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~-- 235 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE-- 235 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH--
Confidence 99999999999999999999999999999999986 69999999999999976 999999999999865431 10000
Q ss_pred CCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhh
Q 000689 656 ENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEK 735 (1350)
Q Consensus 656 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1350)
+ +
T Consensus 236 ---------------------------------------------------------------------------~--~- 237 (500)
T COG1129 236 ---------------------------------------------------------------------------D--E- 237 (500)
T ss_pred ---------------------------------------------------------------------------H--H-
Confidence 0 0
Q ss_pred hhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 000689 736 LAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELL 815 (1350)
Q Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 815 (1350)
++...
T Consensus 238 -----------------------------------------------lv~~M---------------------------- 242 (500)
T COG1129 238 -----------------------------------------------LVRLM---------------------------- 242 (500)
T ss_pred -----------------------------------------------HHHHh----------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 816 FNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACT 895 (1350)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~ 895 (1350)
.|+
T Consensus 243 ------------------------------------------vGr----------------------------------- 245 (500)
T COG1129 243 ------------------------------------------VGR----------------------------------- 245 (500)
T ss_pred ------------------------------------------hCc-----------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000689 896 AGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPL 975 (1350)
Q Consensus 896 ~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 975 (1350)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 976 RRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSV 1055 (1350)
Q Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v 1055 (1350)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC
Q 000689 1056 FDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY 1135 (1350)
Q Consensus 1056 ~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~ 1135 (1350)
++-+..++ .+ ... ...-.++++|++.. ..++|+||++++||++||.|--|||+|-++++|+|..
T Consensus 246 -~~~~~~~~-~~--~~~-----~~~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~ 309 (500)
T COG1129 246 -ELEDLFPE-PP--EEG-----IGEPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGAR 309 (500)
T ss_pred -chhhhccc-cc--ccC-----CCCcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCC
Confidence 00000000 00 000 00113667776532 1589999999999999999999999999999999998
Q ss_pred CCCccEEEECCccCCCCCH-HHhhcccEEEccCC----ccCcccHHHHhccCC-CCCCHH-HHHHHHHHhccHHHHhcCC
Q 000689 1136 EPSSGRVMIDGKDIRKYNL-KSLRRHMAIVPQEP----CLFASTIYENIAYGH-ESATES-EIIEAARLANADKFISSLP 1208 (1350)
Q Consensus 1136 ~p~~G~I~iDG~di~~~~l-~~lR~~i~~VpQdp----~LF~gTIreNL~~~~-~~~td~-ei~~al~~a~l~~~I~~lp 1208 (1350)
++.+|+|.+||.++.--++ +..+..|+|||-|- .+...||++|+.+.. ...... -+..+.+.+.+.+++.+|.
T Consensus 310 ~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~ 389 (500)
T COG1129 310 PASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLR 389 (500)
T ss_pred cCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcC
Confidence 8999999999998876664 57888999999876 345679999998762 111111 2445566666777887763
Q ss_pred ---CCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh
Q 000689 1209 ---DGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1209 ---~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~ 1284 (1350)
...+.++ .+||||.+|+++|||+|..+|+||||||||.++|--+...|.+.|+++. +|++||+||-.+.++.
T Consensus 390 Ik~~s~~~~v----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll 465 (500)
T COG1129 390 IKTPSPEQPI----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELL 465 (500)
T ss_pred cccCCccchh----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 2333444 4699999999999999999999999999999999999999999999876 6999999999999987
Q ss_pred -hcCEEEEEeCCeEEEe
Q 000689 1285 -NAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1285 -~~DrI~Vl~~GrIvE~ 1300 (1350)
.||||+||.+|||+..
T Consensus 466 ~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 466 GLSDRILVMREGRIVGE 482 (500)
T ss_pred hhCCEEEEEECCEEEEE
Confidence 5999999999999873
No 99
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2e-60 Score=602.35 Aligned_cols=532 Identities=16% Similarity=0.146 Sum_probs=435.9
Q ss_pred HHHHHHHHhcchhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 743 SSFWRLAKMNSPEWV-----YALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFN 817 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 817 (1350)
..+++++++..|+|. .+++.+++.++...+....+++.+.+++.....+...+......|+++++++.++..+..
T Consensus 77 ~~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~ 156 (659)
T TIGR00954 77 GKLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIK 156 (659)
T ss_pred HHHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 335666777777665 566666777777778888888888888876644433233333445555666667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 818 TLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAG 897 (1350)
Q Consensus 818 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~ 897 (1350)
++..++......++...+|++.|++....++.|||. ++|++.+|+++|++.+...+...+..++..++.++++++.+
T Consensus 157 ~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L 233 (659)
T TIGR00954 157 YLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKL 233 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888889999999999999988889999984 67999999999999999999999999999999998888877
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000689 898 FV-LQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLR 976 (1350)
Q Consensus 898 ~~-~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~ 976 (1350)
+. .+|.+++++++.+|+.++...+..+.+.+..++.++..+.....+.|.++|+++|++|+.++...++|.+..++..+
T Consensus 234 ~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~ 313 (659)
T TIGR00954 234 LTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVE 313 (659)
T ss_pred HHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 76 99999999999999998888888888888888889999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHH-Hc----CCCCHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 000689 977 RCFWKGQIAGSGYGVAQFCLYA--SYALGLWYSSWLV-KH----GISDFSKTIRVFMV----LMVSANGAAETLTLAPDF 1045 (1350)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~-~~----g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 1045 (1350)
...+...+.+....+..++... ...+.++.|...+ .. |.++.+..+..+.. +.....++..+.....++
T Consensus 314 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i 393 (659)
T TIGR00954 314 HLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDM 393 (659)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777777766666666542 2223333334233 22 67888876664333 334467788888889999
Q ss_pred HHHHHHHHHHHHHhcccccCCC------CCCC---C------------CCCCCCCCCcEEEEEEEEECCCCCCCCcccce
Q 000689 1046 IKGGRAMRSVFDLLDRKTEIEP------DDPD---A------------TPVPDRLRGEVELKHVDFSYPSRPDIPIFRDL 1104 (1350)
Q Consensus 1046 ~~~~~a~~~v~~~~~~~~~~~~------~~~~---~------------~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~v 1104 (1350)
.++..+.+|+.++++.+++.+. .... . ........+.|+++||+|+||++ .++|+|+
T Consensus 394 ~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~i 471 (659)
T TIGR00954 394 TRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESL 471 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeeecc
Confidence 9999999999999976443210 0000 0 00001134679999999999743 3699999
Q ss_pred eEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCC-
Q 000689 1105 SLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGH- 1183 (1350)
Q Consensus 1105 sl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~- 1183 (1350)
||+|++||++||+||||||||||+++|.|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 472 sl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~ 540 (659)
T TIGR00954 472 SFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDS 540 (659)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCC
Confidence 999999999999999999999999999999999999999874 67899999999999999999999864
Q ss_pred ------CCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHH
Q 000689 1184 ------ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESE 1257 (1350)
Q Consensus 1184 ------~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te 1257 (1350)
++.++++++++++.+++++++.. |.||||..+ .+.+||||||||++||||++++|++||||||||+||++++
T Consensus 541 ~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~ 618 (659)
T TIGR00954 541 SEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVE 618 (659)
T ss_pred hhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHH
Confidence 34678899999999999999988 999999986 5679999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeC
Q 000689 1258 RSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDD 1294 (1350)
Q Consensus 1258 ~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~ 1294 (1350)
+.+++.+++. |+|+|+||||++++..||+|++|++
T Consensus 619 ~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 619 GYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 9999999873 8999999999999999999999973
No 100
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.5e-62 Score=607.72 Aligned_cols=193 Identities=24% Similarity=0.332 Sum_probs=163.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeE
Confidence 4899999999953 25999999999999999999999999999999999999999999986 159
Q ss_pred EEEccCCcc-CcccHHHHhccCCCCCC-HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1162 AIVPQEPCL-FASTIYENIAYGHESAT-ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1162 ~~VpQdp~L-F~gTIreNL~~~~~~~t-d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
+|+||++.+ +..|++||+.++..... +..+.++++..++.+... ....+||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-----------~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-----------KNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999875 56799999987532222 234456666666654432 33457999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecCh
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|+||||||||++||+++...+.+.|+++.+ |+|+|+|+|++..+.. ||||++|++ ++...|+.
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 999999999999999999999999998753 7899999999999865 999999965 88877763
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.5e-60 Score=572.68 Aligned_cols=485 Identities=29% Similarity=0.422 Sum_probs=347.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ +++|+|+||++.+|+++||||+||||||||+++|.|...|++|+|...+. -++
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 5899999999964 46999999999999999999999999999999999999999999998762 169
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCCC--HHHHHHHHH-------------------------HhchHHHHhcCCCCccc
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDAD--LNEIEEAAR-------------------------VANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~~--~~~~~~~~~-------------------------~~~~~~~i~~lp~g~~t 558 (1350)
||++|++.+.+. ||.+.+..+..... ..+++.+.. .+.+...+..| |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999865 99999988754211 011111100 02223334444 4443
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEE
Q 000689 559 QVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVL 637 (1350)
Q Consensus 559 ~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl 637 (1350)
. .....+||||||-|++|||||+.+|+||||||||++||.++..++.+.|.+. +| |+|+||||..++.+ |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~-~g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY-PG-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC-CC-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 4556789999999999999999999999999999999999999999999865 46 99999999999987 9999999
Q ss_pred eCCEEEEecChHHHHhccCCcHHHHHHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCcc
Q 000689 638 QQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFST 717 (1350)
Q Consensus 638 ~~G~i~~~g~~~~l~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1350)
+.|++... .|.|..+++......+.....
T Consensus 224 d~g~l~~y-----------~Gny~~~~~~r~~~~~~~~~~---------------------------------------- 252 (530)
T COG0488 224 DRGKLTPY-----------KGNYSSYLEQKAERLRQEAAA---------------------------------------- 252 (530)
T ss_pred cCCceeEe-----------cCCHHHHHHHHHHHHHHHHHH----------------------------------------
Confidence 99987654 244544443322211110000
Q ss_pred CcccccccCCCCchhhhhhhhhhhhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHH
Q 000689 718 SDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIR 797 (1350)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1350)
.. + ......+.
T Consensus 253 -------------~~------~-~~~~~~~~------------------------------------------------- 263 (530)
T COG0488 253 -------------YE------K-QQKELAKE------------------------------------------------- 263 (530)
T ss_pred -------------HH------H-HHHHHHHH-------------------------------------------------
Confidence 00 0 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHH
Q 000689 798 EIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIG 877 (1350)
Q Consensus 798 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~ 877 (1350)
T Consensus 264 -------------------------------------------------------------------------------- 263 (530)
T COG0488 264 -------------------------------------------------------------------------------- 263 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHh
Q 000689 878 DRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAF 957 (1350)
Q Consensus 878 ~~l~~~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~ 957 (1350)
T Consensus 264 -------------------------------------------------------------------------------- 263 (530)
T COG0488 264 -------------------------------------------------------------------------------- 263 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Q 000689 958 NSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAE 1037 (1350)
Q Consensus 958 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1350)
..|.+++........+.
T Consensus 264 ---~~~i~r~~~~~~~~k~a------------------------------------------------------------ 280 (530)
T COG0488 264 ---QEWIRRGKAAASKAKKA------------------------------------------------------------ 280 (530)
T ss_pred ---HHHHHHHHhccchHHHH------------------------------------------------------------
Confidence 00000000000000000
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HhcccccCCCCCCC--CCCCCC--CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCC
Q 000689 1038 TLTLAPDFIKGGRAMRSVFD--LLDRKTEIEPDDPD--ATPVPD--RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAG 1111 (1350)
Q Consensus 1038 ~~~~~~~~~~~~~a~~~v~~--~~~~~~~~~~~~~~--~~~~~~--~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~G 1111 (1350)
.......+++.+ ....+... ..+. ..+++. ..+--++++|+++.|+.. .++++++||.|.+|
T Consensus 281 --------~sr~k~l~k~~~~~~~~~~~~~--~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g 348 (530)
T COG0488 281 --------KSRIKRLEKLEARLAEERPVEE--GKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRG 348 (530)
T ss_pred --------HHHHHHHHHHHhhhhhcccccc--cccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCC
Confidence 000000011110 00011100 0000 001111 123359999999999643 47999999999999
Q ss_pred CEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCC-ccC-cccHHHHhccCCCCCCHH
Q 000689 1112 KTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEP-CLF-ASTIYENIAYGHESATES 1189 (1350)
Q Consensus 1112 e~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp-~LF-~gTIreNL~~~~~~~td~ 1189 (1350)
++||||||||+|||||+++|.|-..|.+|+|.+.-. -++||.+|+- .++ +.|+-|++.-..++..+.
T Consensus 349 ~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~ 417 (530)
T COG0488 349 DRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQ 417 (530)
T ss_pred CEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHH
Confidence 999999999999999999999999999999998632 2689999998 444 348999998776655577
Q ss_pred HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC
Q 000689 1190 EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS 1269 (1350)
Q Consensus 1190 ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~ 1269 (1350)
++...|...+...- ...++| ..||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.+..
T Consensus 418 ~~r~~L~~f~F~~~------~~~~~v----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f~- 486 (530)
T COG0488 418 EVRAYLGRFGFTGE------DQEKPV----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDFE- 486 (530)
T ss_pred HHHHHHHHcCCChH------HHhCch----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhCC-
Confidence 88888877765432 223344 4699999999999999999999999999999999999999999998754
Q ss_pred CceEEEEecCchhhhh-cCEEEEEeCCeEEEe-cChhHHhhc
Q 000689 1270 GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL-GSHSHLLKN 1309 (1350)
Q Consensus 1270 g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~-Gt~~eLl~~ 1309 (1350)
| |||+|||+...+.. |++|+++++ ++.++ |++++..+.
T Consensus 487 G-tvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 487 G-TVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred C-eEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 4 99999999999987 999999999 88887 888887654
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=6.7e-60 Score=537.77 Aligned_cols=462 Identities=26% Similarity=0.446 Sum_probs=360.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-HHHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL-RWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~-~~~r~~ 505 (1350)
.+++++++++|| ...+++||||+|++||+.||.|+||+|||||+++|.|+|+|++|+|++||++++--++ +.+|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 3469999999999999999999999999999999999999999999999999986554 568889
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|+|++.|++. |+.|||.+|.+......+........+.+...++ |++-...+....||-||||||.|-+|||++
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcC
Confidence 9999999999976 9999999998642111111111112223334444 666667777889999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHHHH
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~ 662 (1350)
|+|||||||||-|-|...+.+.+.++++. .|+|||+|||++..++. |||+-||.+||++..-.+ . +
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~--~-------- 226 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V--A-------- 226 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C--C--------
Confidence 99999999999999999999999999885 59999999999999987 999999999998643210 0 0
Q ss_pred HHHHHHHhhHhhhhhcccCCCCCCcccCCCCCcccccCCCCCCCCccccccCCccCcccccccCCCCchhhhhhhhhhhh
Q 000689 663 LIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQA 742 (1350)
Q Consensus 663 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1350)
+. .. +.
T Consensus 227 ---------------------~~--------------------------------------------t~--~e------- 232 (501)
T COG3845 227 ---------------------ET--------------------------------------------TE--EE------- 232 (501)
T ss_pred ---------------------CC--------------------------------------------CH--HH-------
Confidence 00 00 00
Q ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 743 SSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHS 822 (1350)
Q Consensus 743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 822 (1350)
+..
T Consensus 233 -----la~------------------------------------------------------------------------ 235 (501)
T COG3845 233 -----LAE------------------------------------------------------------------------ 235 (501)
T ss_pred -----HHH------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 823 FWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQW 902 (1350)
Q Consensus 823 ~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~~i~~~~~~i~~~~~~~~~~~ 902 (1350)
.|+
T Consensus 236 ---------------lMv-------------------------------------------------------------- 238 (501)
T COG3845 236 ---------------LMV-------------------------------------------------------------- 238 (501)
T ss_pred ---------------Hhc--------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 903 RLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKG 982 (1350)
Q Consensus 903 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 982 (1350)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000689 983 QIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRK 1062 (1350)
Q Consensus 983 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~ 1062 (1350)
-..+ ..+
T Consensus 239 ------------------------------G~~v-------------------------------------------~~~ 245 (501)
T COG3845 239 ------------------------------GREV-------------------------------------------VLR 245 (501)
T ss_pred ------------------------------CCcc-------------------------------------------ccc
Confidence 0000 000
Q ss_pred ccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEE
Q 000689 1063 TEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRV 1142 (1350)
Q Consensus 1063 ~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I 1142 (1350)
.+..+ .. +..--++++|++..=+ + +.+.+++|||+|++||++||.|-.|-|-+.|+.+|.|+..|.+|+|
T Consensus 246 ~~~~~------~~--pg~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I 315 (501)
T COG3845 246 VVKPP------ST--PGEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRI 315 (501)
T ss_pred cccCC------CC--CCCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceE
Confidence 00000 00 0112488999987543 2 2468999999999999999999999999999999999999999999
Q ss_pred EECCccC-CCCCHHHhhc-ccEEEccCCc----cCcccHHHHhccCCCC---------CCHHHHHHHHHHhccHHHHhcC
Q 000689 1143 MIDGKDI-RKYNLKSLRR-HMAIVPQEPC----LFASTIYENIAYGHES---------ATESEIIEAARLANADKFISSL 1207 (1350)
Q Consensus 1143 ~iDG~di-~~~~l~~lR~-~i~~VpQdp~----LF~gTIreNL~~~~~~---------~td~ei~~al~~a~l~~~I~~l 1207 (1350)
+++|.|+ ...+...+|+ .++|||.|.+ ...-|+.||+.++..+ ....++... ..+.++.+
T Consensus 316 ~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~-----a~~li~~f 390 (501)
T COG3845 316 LLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKF-----ARELIEEF 390 (501)
T ss_pred EECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHH-----HHHHHHHc
Confidence 9999997 6777777665 5999999984 5677999999866432 112333222 23344432
Q ss_pred ---CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhh
Q 000689 1208 ---PDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTI 1283 (1350)
Q Consensus 1208 ---p~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti 1283 (1350)
+.+.++++ .+||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+|+.+
T Consensus 391 dVr~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEi 466 (501)
T COG3845 391 DVRAPSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEI 466 (501)
T ss_pred CccCCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHH
Confidence 33444444 4799999999999999999999999999999999999999999998865 699999999999998
Q ss_pred hh-cCEEEEEeCCeEEEecChhH
Q 000689 1284 RN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1284 ~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
.. ||||+||.+|+|+....+++
T Consensus 467 l~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 467 LELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred HHhhheeeeeeCCceeccccccc
Confidence 66 99999999999998877765
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.2e-53 Score=478.42 Aligned_cols=238 Identities=25% Similarity=0.444 Sum_probs=224.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
|.|+|+||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|+|||+++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 579999999999743 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred cEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
|+||||+|.+|++|+++|+++..+ .++++++++++.+++++++.++|++|++.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999986533 6788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHH
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~ 1320 (1350)
+||||||||++||+.+++.+++.|++.+.++|+|+||||++++..||||+||++|+|+|.|+|++|++. .+.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988889999999999999999999999999999999999999986 689999987
Q ss_pred Hhh
Q 000689 1321 LQR 1323 (1350)
Q Consensus 1321 ~q~ 1323 (1350)
...
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 654
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.6e-52 Score=425.32 Aligned_cols=228 Identities=32% Similarity=0.537 Sum_probs=198.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC-CCCHHHHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK-SLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~-~~~~~~~r~~ 505 (1350)
+|+++||+++|++ ..||+|||++|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 5899999999973 46999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+|+|||+..||+- |+.|||.++.- ..+.++.+ +. +.+.+.++ |+.......+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~---~~--A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAR---EK--ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHH---HH--HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999975 99999998732 12222222 22 23445555 787888888999999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcH
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGV 659 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 659 (1350)
+.+|+++|+|||||||||+....+.+.++++. .|.|.|+|||.+.+++. ||||+.|++|+|+++|+++++..++.+..
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~~~R 231 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPKSER 231 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCCCHH
Confidence 99999999999999999999999999999986 59999999999999988 99999999999999999999998865544
Q ss_pred HHHHH
Q 000689 660 YAKLI 664 (1350)
Q Consensus 660 y~~l~ 664 (1350)
.+++.
T Consensus 232 ~~~FL 236 (240)
T COG1126 232 TRQFL 236 (240)
T ss_pred HHHHH
Confidence 44433
No 105
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-50 Score=430.52 Aligned_cols=234 Identities=39% Similarity=0.602 Sum_probs=201.8
Q ss_pred eEEEEEEEEECCCC--CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HH
Q 000689 427 LIELKHVDFSYPSR--PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~--~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~ 501 (1350)
+|++++|++.|+.. ....+|+||||+|++||+.||||+||+|||||++++.++-.|++|+|.+||+|+..++. ..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 48999999999752 12468999999999999999999999999999999999999999999999999988765 45
Q ss_pred HhccEEEEccCCCccc-ccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 502 LRQQIGLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf~-~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+|++||++||++.|++ .||++||+|...-+...+-+...+...+.+++ |+....+..+.+|||||||||+||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV-----gL~dk~~~yP~qLSGGQKQRVaIARA 155 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV-----GLSDKADRYPAQLSGGQKQRVAIARA 155 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc-----CChhhhccCchhcCcchhhHHHHHHH
Confidence 6789999999999997 69999999976533221222223334444444 77777888899999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCC
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGEN 657 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~ 657 (1350)
|+.+|+|||.|||||||||+|.+.|.+.|+++. .|-|+++|||-++.++. |||+.||++|+++|+|+-.++..++++
T Consensus 156 La~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~Pk~ 235 (339)
T COG1135 156 LANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANPKH 235 (339)
T ss_pred HhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCcch
Confidence 999999999999999999999999999998874 48999999999999988 999999999999999999999988766
Q ss_pred cHHHHHHH
Q 000689 658 GVYAKLIR 665 (1350)
Q Consensus 658 ~~y~~l~~ 665 (1350)
..-++++.
T Consensus 236 ~~t~~fi~ 243 (339)
T COG1135 236 AITQEFIG 243 (339)
T ss_pred HHHHHHHH
Confidence 66666654
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-49 Score=407.24 Aligned_cols=214 Identities=33% Similarity=0.557 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC-CCCHHHhhcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR-KYNLKSLRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~-~~~l~~lR~~ 1160 (1350)
-|+++||+.+|.. ..||+|||++|++||+|+|+||||||||||+++|.++-+|++|+|.+||.++. ..++..+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999963 46999999999999999999999999999999999999999999999998763 3389999999
Q ss_pred cEEEccCCccCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEPCLFAS-TIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~---~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+|+|+|+..||+- |+.||+.++.- ..+.+ .-.+.++++++.+.....| .+|||||+||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 9999999999965 99999987631 12222 3455677888888777666 5799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||||.-+|+++++|||||||||+.-..|.+.++++. .|.|+|+|||.+...++ ||||+.||+|+|+|+|+|+++..+
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999999976 68999999999999988 999999999999999999999987
No 107
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-49 Score=411.36 Aligned_cols=228 Identities=35% Similarity=0.568 Sum_probs=196.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+|+|||++|.+ ..+++|+||+|++||+++++|||||||||++++|.|+++|++|+|++||+++++++...||++|
T Consensus 1 MI~~~nvsk~y~~---~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~I 77 (309)
T COG1125 1 MIEFENVSKRYGN---KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKI 77 (309)
T ss_pred CceeeeeehhcCC---ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhh
Confidence 5899999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccc--hhcCCCCCCChHHHHHHHHHHHh
Q 000689 507 GLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDT--QVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t--~~~~~g~~LSgGqkqri~iARal 581 (1350)
|||-|..-||+. ||.|||++-.. ..+.+++.+- +.+.+..+ |++. ...+.+.+|||||+|||.+||||
T Consensus 78 GYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RAL 150 (309)
T COG1125 78 GYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARAL 150 (309)
T ss_pred hhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHH
Confidence 999999999965 99999987532 2233333221 23333333 5553 45677899999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhccCCc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAKGENG 658 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 658 (1350)
+.+|+||++|||++||||.+++.+|+.+.++.+ ++|+|+|||+++..- -+|||.+|++|+|+..+++++++.++.+.
T Consensus 151 AadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pan~ 230 (309)
T COG1125 151 AADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPAND 230 (309)
T ss_pred hcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCccHH
Confidence 999999999999999999999999999988854 899999999999875 59999999999999999999999987555
Q ss_pred HHHHHH
Q 000689 659 VYAKLI 664 (1350)
Q Consensus 659 ~y~~l~ 664 (1350)
.-..++
T Consensus 231 FV~~f~ 236 (309)
T COG1125 231 FVEDFF 236 (309)
T ss_pred HHHHHh
Confidence 444444
No 108
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.2e-48 Score=438.60 Aligned_cols=238 Identities=26% Similarity=0.433 Sum_probs=220.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++|+|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.+||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999642 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+||||+|.+|++|+++|+.+..+ .++++++++++.+++.+++..+|+++++.++++|.+||||||||++||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999964332 4678899999999999999999999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~ 665 (1350)
+||||||||++||+.+.+.+++.|++..+++|+|+||||++++..||+|++|++|++++.|++++|++. .+.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988779999999999999988999999999999999999999986 577888776
Q ss_pred HHH
Q 000689 666 MQE 668 (1350)
Q Consensus 666 ~~~ 668 (1350)
...
T Consensus 236 ~~~ 238 (275)
T cd03289 236 PSD 238 (275)
T ss_pred hcc
Confidence 543
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-48 Score=396.97 Aligned_cols=220 Identities=31% Similarity=0.521 Sum_probs=198.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-----cEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS-----GQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~i~g~~~~~--~~~ 499 (1350)
.++++|+++.|++ +.+|+|||++|++++++|++||||||||||++++.|+.+..+ |+|.++|+||.+ ++.
T Consensus 7 ~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 5899999999973 469999999999999999999999999999999999999876 999999999975 578
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
-.+|++||+|+|.|.-|+.||+|||+||..-. -++-++++++.|.+++.+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 89999999999999999999999999994311 12346778888888887643 456778899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|+||||||.-+|+|||||||||||||.+..+|.+.|.++.++-|+|+|||.+....+ +|+...+..|+++|.|+.+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998866 9999999999999999999998
Q ss_pred hccC
Q 000689 653 AKGE 656 (1350)
Q Consensus 653 ~~~~ 656 (1350)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8753
No 110
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-48 Score=447.28 Aligned_cols=224 Identities=29% Similarity=0.494 Sum_probs=199.6
Q ss_pred CCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCC--
Q 000689 1078 RLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIR-- 1150 (1350)
Q Consensus 1078 ~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~-- 1150 (1350)
+..+.|+|+||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.|||+|+.
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 455789999999999743 3469999999999999999999999999999999999997 57999999999997
Q ss_pred CCCHHHhhcccEEEccCCccCcccHHHHhccCCC--CCCHHHHH-----HHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1151 KYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATESEII-----EAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1151 ~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~td~ei~-----~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
..++..+|++++||||+|.+|++|++|||.++.. ..++++.+ ++++.+++ ++++++.++++|.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L-------~~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAAL-------WDEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCC-------cchhhhhhhCCcccCC
Confidence 4566789999999999999999999999997532 24555543 34455544 4466788999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecC
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt 1302 (1350)
||||||+|||||++++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.+ ||||+||++|+|+|.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998889999999999999988 99999999999999999
Q ss_pred hhHHhhc
Q 000689 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
|++++..
T Consensus 308 ~~~l~~~ 314 (329)
T PRK14257 308 TKTIFIH 314 (329)
T ss_pred HHHHhcC
Confidence 9999876
No 111
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-48 Score=417.86 Aligned_cols=216 Identities=34% Similarity=0.582 Sum_probs=191.2
Q ss_pred EEEEEEEEECCCC--CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHh
Q 000689 1083 VELKHVDFSYPSR--PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSL 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~--~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~---l~~l 1157 (1350)
|+|++|++.|+.. +..++|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 2346999999999999999999999999999999999999999999999998887775 5567
Q ss_pred hcccEEEccCCccCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1158 RRHMAIVPQEPCLFA-STIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~-gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++||+|+|++-|++ .|+.+|++|... ..+.+| +.+.++.+|+.|+-.+- ..+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~y-----------P~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRY-----------PAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccC-----------chhcCcchhhHH
Confidence 789999999999997 799999998743 233444 45666777776665554 478999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+|||||..+|+||+.|||||||||+|-+.|.+.|++.- -|-|+++|||.++.+++ |||++||++|+|+|+|+..++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998754 48999999999999988 9999999999999999999999
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
.+
T Consensus 231 ~~ 232 (339)
T COG1135 231 AN 232 (339)
T ss_pred cC
Confidence 87
No 112
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=9.4e-47 Score=430.25 Aligned_cols=194 Identities=26% Similarity=0.377 Sum_probs=162.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|.|+||+|+|++++ .++++++|-|.++++||+|||||+|||||++++.+...|+.|.|.-.-.. ++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cc
Confidence 499999999998654 69999999999999999999999999999999999999999988764322 23
Q ss_pred EEEccC---CccCcccHHHHhccCCCC-CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1162 AIVPQE---PCLFASTIYENIAYGHES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQd---p~LF~gTIreNL~~~~~~-~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
++--|. -..++-|.-|++....++ -..+++...+...|+...... .++ .+||+|||.|+++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~------~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQV------VPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccc------cch----hhcccccchhHHHHHHHh
Confidence 333333 335677888888765554 456778888899988743333 233 479999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEe
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~ 1300 (1350)
+.|.||||||||++||.+|-..+.++|.++-. +||+|+|+...|.. +++|.+.+||.+...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~~G--gvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEFPG--GVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhccCC--ceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 99999999999999999999999999987644 89999999999977 999999999988753
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-47 Score=386.88 Aligned_cols=218 Identities=31% Similarity=0.537 Sum_probs=198.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc-----cEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS-----GRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~-----G~I~iDG~di~~--~~l 1154 (1350)
.++++|+++.|. +..+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 3469999999999999999999999999999999999999875 999999999966 578
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
..||+++|+|+|.|--|..||+||++||.. ..-|+-++.+++.|.+||-+.. . +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---r----L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---R----LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---H----hhCCccCCChhHHH
Confidence 999999999999999999999999999842 1224457889999999998754 2 34567789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
||||||||.-+|+|||||||||||||.+-..|.+.|.++.++-|+|+|||.+.-... +|+...+-.|+++|+|+-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999999999999999998755 8999999999999999999998
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 76
No 114
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-46 Score=431.92 Aligned_cols=225 Identities=28% Similarity=0.496 Sum_probs=196.5
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS-- 496 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~-- 496 (1350)
..+.|+++|++|+|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++..
T Consensus 77 ~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~ 155 (329)
T PRK14257 77 HANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKK 155 (329)
T ss_pred cCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 45689999999999642 3469999999999999999999999999999999999997 579999999999973
Q ss_pred CCHHHHhccEEEEccCCCcccccHHHHhhcCCC--CCCHHHH-----HHHHHHhchHHHHhcCCCCccchhcCCCCCCCh
Q 000689 497 LKLRWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNEI-----EEAARVANAYSFIIKLPDGFDTQVRERGVQLSG 569 (1350)
Q Consensus 497 ~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~~~~~~-----~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 569 (1350)
.+...+|+.++||||+|++|++|++|||.|+.. ..++++. .++++.++ |++++++.++++|.+|||
T Consensus 156 ~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSg 228 (329)
T PRK14257 156 ISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSG 228 (329)
T ss_pred cchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCH
Confidence 455678999999999999999999999998742 1233332 22333333 445667889999999999
Q ss_pred HHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000689 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 648 (1350)
||||||+|||||+++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||+|+||++|+|++.|++
T Consensus 229 GqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~ 308 (329)
T PRK14257 229 GQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGET 308 (329)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998888999999999999987 999999999999999999
Q ss_pred HHHHhccC
Q 000689 649 DELIAKGE 656 (1350)
Q Consensus 649 ~~l~~~~~ 656 (1350)
+++...+.
T Consensus 309 ~~l~~~~~ 316 (329)
T PRK14257 309 KTIFIHPK 316 (329)
T ss_pred HHHhcCCC
Confidence 99987643
No 115
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.3e-46 Score=414.76 Aligned_cols=236 Identities=46% Similarity=0.794 Sum_probs=218.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|+.. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999643 246999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|+||++.+|..|++|||.++....+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986554556677888888999999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|||||||++||+.+...+.+.|++..+|+|+|++||+++.+..||+|++|++|++++.|++++++.+ .+.|.+++++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~~ 236 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQL 236 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHhc
Confidence 9999999999999999999999998779999999999999988999999999999999999999977 6888887753
No 116
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-43 Score=383.62 Aligned_cols=472 Identities=19% Similarity=0.237 Sum_probs=355.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 152 YFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIH 231 (1350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~ 231 (1350)
+++++..+.++.+.+........|+++..++|.++.++++..|+.-+++- +++.++.++++|+..|. +-...++.+.+
T Consensus 53 ~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~-~~~rlla~L~~Dvr~IS-f~~s~lp~~~q 130 (546)
T COG4615 53 EFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERL-GSARLLAGLTSDVRNIS-FAFSRLPELVQ 130 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHh-cccchhhhhccccccee-ehHhhhHHHHH
Confidence 33333344445556666667788999999999999999999999999998 99999999999999998 44456778899
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHchHHHHHHhccHHHH--
Q 000689 232 YLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKA-- 309 (1350)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~~i~~vk~f~~e~~~-- 309 (1350)
..+.++++.+.+.|+++++.++.++++.+.++...+...+..+.....++..+++.+..+-.+.|-+..+....-.+.
T Consensus 131 a~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h 210 (546)
T COG4615 131 AIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVH 210 (546)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHH
Confidence 999999999999999999999888888888888888888888889999999999999999999999998876433222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 310 LQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSIS 389 (1350)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~l~~~~~~~~ 389 (1350)
.+.|....+.+.+...+..........+.+++.+....+++|+.... +--+.....++...+++...|+.+....++
T Consensus 211 ~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~---~w~st~~a~tivlvlLflr~pL~s~vgilP 287 (546)
T COG4615 211 NNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSL---GWASTNVAATIVLVLLFLRTPLLSAVGILP 287 (546)
T ss_pred hhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccchhhHHHHHHHHHHHHhhHHHHHHhhhh
Confidence 12222222222221111212211223344444455555555544332 212222334445556667779999999999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcH
Q 000689 390 AFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGK 469 (1350)
Q Consensus 390 ~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGK 469 (1350)
.+..|.+|++||.++-..++..+ ... ....+..+ .|+++||.|+|+.. .--+..||++|++||+|-|+|.|||||
T Consensus 288 ~l~~AqvA~~kiakle~~~~~a~-~~~-~q~~p~~~-~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGK 362 (546)
T COG4615 288 TLLTAQVAFNKIAKLELAPYKAD-FPR-PQAFPDWK-TLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGK 362 (546)
T ss_pred HHHHHHHHHHHHHHhhcCCcccc-CCC-CCcCCccc-ceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcH
Confidence 99999999999998754333211 111 11222233 59999999999743 246889999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCC-CCHHHHHHHHHHhchHHH
Q 000689 470 STVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPD-ADLNEIEEAARVANAYSF 548 (1350)
Q Consensus 470 STl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~-~~~~~~~~~~~~~~~~~~ 548 (1350)
||++++|.|+|.|++|+|++||.++..-+++++|+-++-|+-|.+||+.++ |... ++.+.+..-.+.-.+..-
T Consensus 363 ST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~k 436 (546)
T COG4615 363 STLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAHK 436 (546)
T ss_pred HHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999998754 3222 455555443333222221
Q ss_pred HhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCch
Q 000689 549 IIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLS 626 (1350)
Q Consensus 549 i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~ 626 (1350)
. ++-+|-- ....||-|||.|+|+--|++-+.||++|||=-+--||.=++.+.+.+--.. .|||++.||||-.
T Consensus 437 t-sl~d~~f-----s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~ 510 (546)
T COG4615 437 T-SLNDGRF-----SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDH 510 (546)
T ss_pred h-cccCCcc-----cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCch
Confidence 1 1111111 124699999999999999999999999999999999999998887765443 5999999999999
Q ss_pred hhhhcCEEEEEeCCEEEEe
Q 000689 627 TIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 627 ~~~~~d~i~vl~~G~i~~~ 645 (1350)
....|||++.|++|+++|.
T Consensus 511 YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 511 YFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhHHHHHHHhcCceeec
Confidence 9999999999999999985
No 117
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-46 Score=392.97 Aligned_cols=221 Identities=33% Similarity=0.555 Sum_probs=195.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCccCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhccH--HHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANAD--KFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~td----~ei~~al~~a~l~--~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
||-|.--||. .||.|||+.-.. .-+. +.+.+-++.++++ +|..+.| ..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHHH
Confidence 9999999996 599999985421 2233 3455666677775 3555555 67999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhh-hhcCEEEEEeCCeEEEecChhHHhhcC
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti-~~~DrI~Vl~~GrIvE~Gt~~eLl~~~ 1310 (1350)
|||..+|+||+||||.+||||.|...+|+-+.+..+ |+|+|+|||++++. +-+|||+||++|+|+.+|+|++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~- 226 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN- 226 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC-
Confidence 999999999999999999999999999999988653 89999999999986 45999999999999999999999987
Q ss_pred CCchhHHH
Q 000689 1311 PDGCYARM 1318 (1350)
Q Consensus 1311 ~~g~y~~l 1318 (1350)
|...|-+-
T Consensus 227 Pan~FV~~ 234 (309)
T COG1125 227 PANDFVED 234 (309)
T ss_pred ccHHHHHH
Confidence 66655443
No 118
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.1e-45 Score=415.67 Aligned_cols=241 Identities=32% Similarity=0.562 Sum_probs=223.2
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhh
Q 000689 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR 1158 (1350)
..|.|+++|++++|+.. +.++|+|+||+|+|||.+||+|+||||||||+++|.|+++|++|+|++||.++...+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24699999999999999999999999999999999999999999999999999999888999
Q ss_pred cccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
++++|++|+|.+|++|+++|+.+... ..+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999986532 34667888899999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHH
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
+|++|||||||++||++++..+.+.+++..+++|+|++||+++.+..||||++|++|++++.|+++++++. .++.|+.+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 252 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ-EDGVFASL 252 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc-cchHHHHH
Confidence 99999999999999999999999999987779999999999999989999999999999999999999876 47888888
Q ss_pred HHHh
Q 000689 1319 IQLQ 1322 (1350)
Q Consensus 1319 ~~~q 1322 (1350)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7653
No 119
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=6.6e-45 Score=407.51 Aligned_cols=235 Identities=50% Similarity=0.835 Sum_probs=214.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4789999999642 246999999999999999999999999999999999999999999999999998888788889999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++++|+.|++||+.++.+....+++.++++..++.+.+..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987654455666777777888999999999999999999999999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHHH
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~ 665 (1350)
|||||||++||+.+.+.+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|++++++.+ .+.|..+++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999876 577776553
No 120
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.1e-45 Score=382.07 Aligned_cols=228 Identities=35% Similarity=0.532 Sum_probs=194.1
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WL 502 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~ 502 (1350)
..|++++|+|+|++ +.||+|+||+|++||+++|+||||||||||+++|.|+..|++|+|.++|.|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 36999999999974 4699999999999999999999999999999999999999999999999999988754 57
Q ss_pred hccEEEEccCCCcccc-cHHHHhhcCCCC---CCHHHHHHHHHHhchHHHHhcCCCCccch-hcCCCCCCChHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQ-VRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~-~~~~g~~LSgGqkqri~i 577 (1350)
|+++|+++|...||+. ||+||+.|...+ .+++.+.+.+.. -++.. |+... ....+.+||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~-----KL~~V--GL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLM-----KLELV--GLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHH-----HHHhc--CCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999976 999999996432 334444332211 12221 55555 344578999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+..||+|+++|||||+|||.+...+.+.|+++.. |.|+|+|||+++++.. ||||+++.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999988864 8999999999999977 899999999999999999999886
Q ss_pred cCCcHHHHHH
Q 000689 655 GENGVYAKLI 664 (1350)
Q Consensus 655 ~~~~~y~~l~ 664 (1350)
. +...++++
T Consensus 237 d-~P~v~qf~ 245 (263)
T COG1127 237 D-DPWVRQFF 245 (263)
T ss_pred C-CHHHHHHh
Confidence 2 44444443
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.5e-45 Score=398.00 Aligned_cols=214 Identities=36% Similarity=0.566 Sum_probs=189.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++|+|++ +++|+|+||++++||+++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4899999999973 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCc-ccccHHHHhhcCCCCC-------CH---HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHH
Q 000689 507 GLVSQEPAL-FATTIKENILLGRPDA-------DL---NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~eNi~~g~~~~-------~~---~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
|||||++.. |.-||+|-+.+|+... +. +.+.++.+..++.+ ...+...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~-----------la~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEH-----------LADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHH-----------HhcCcccccChhHHHHH
Confidence 999999754 5669999999996421 22 23445555554444 44555678999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecChHHHH
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTI-RKADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~-~~~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
.|||||+++|+||+||||||+||....-.+++.++++. +|+|+|+|.|+++.. +.||++++|++|+|+.+|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999986 489999999999986 569999999999999999999988
Q ss_pred hc
Q 000689 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 122
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.3e-44 Score=445.97 Aligned_cols=208 Identities=27% Similarity=0.401 Sum_probs=169.1
Q ss_pred CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CcEEEECCeeCCCCCHHHHhccEEEEccCCCcccc-
Q 000689 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT---SGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFAT- 518 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~- 518 (1350)
..+|+|++.-++||+.+.+.||.|||||||++.|+|-.+-. .|+|.+||.+.++..+ ++.++|++|+..-|..
T Consensus 128 ~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~---~~~~aY~~e~DvH~p~l 204 (1391)
T KOG0065|consen 128 IQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVP---KKTVAYNSEQDVHFPEL 204 (1391)
T ss_pred ceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCccccccc---CceEEecccccccccee
Confidence 46999999999999999999999999999999999987542 5799999999988766 7789999998877754
Q ss_pred cHHHHhhcCCC---C---CC-HHHHHHHHHHhchHHHHhcCCCCccchhcCCC-CCCChHHHHHHHHHHHhcCCCCEeEE
Q 000689 519 TIKENILLGRP---D---AD-LNEIEEAARVANAYSFIIKLPDGFDTQVRERG-VQLSGGQKQRIAIARAMLKNPAILLL 590 (1350)
Q Consensus 519 ti~eNi~~g~~---~---~~-~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g-~~LSgGqkqri~iARal~~~~~ilil 590 (1350)
||||-+.|... . .+ .++.+..+...+..--+-.|....||.||... ...|||||.||++|-+++.+|+++.+
T Consensus 205 TVreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~ 284 (1391)
T KOG0065|consen 205 TVRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFW 284 (1391)
T ss_pred EEeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeee
Confidence 99999987522 0 11 11111111122222234467778899999875 56999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCch--hhhhcCEEEEEeCCEEEEecChHHHHh
Q 000689 591 DEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLS--TIRKADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 591 DE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~--~~~~~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||+|.+||+.|.-++.++|+++. .+.|.++.=|..+ +....|.|++|.+|+++.+|+.++.+.
T Consensus 285 De~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~ 351 (1391)
T KOG0065|consen 285 DEITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLP 351 (1391)
T ss_pred ecccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHH
Confidence 99999999999999999999875 3778888777665 456699999999999999999998863
No 123
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-45 Score=410.37 Aligned_cols=221 Identities=34% Similarity=0.559 Sum_probs=192.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++. .+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.|||.++++++++. ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 2899999999999999999999999999999999999999999999999999998876 689
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC--C----HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA--D----LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~--~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|+|||+..||+. ||+|||.||.... . ++++.++++.. +++..+..++.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L-----------~l~~lL~r~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLL-----------GLEHLLNRKPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHc-----------CChhHHhcCcccCChhhHHHHHHHH
Confidence 999999999976 9999999996532 2 23444555554 4555556667899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+++|++++||||+|+||++.+..+...|+++.+ |.|+|+||||...+.. ||||.||++|+|.+.|++.|+..++.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~ 226 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPA 226 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCcc
Confidence 99999999999999999999999999999988753 7899999999998865 99999999999999999999998764
Q ss_pred CcHHHHH
Q 000689 657 NGVYAKL 663 (1350)
Q Consensus 657 ~~~y~~l 663 (1350)
+..-+.+
T Consensus 227 n~fVA~F 233 (338)
T COG3839 227 NLFVAGF 233 (338)
T ss_pred chhhhhh
Confidence 4433433
No 124
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-44 Score=401.69 Aligned_cols=235 Identities=52% Similarity=0.848 Sum_probs=218.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999632 36999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|+||+|.+|++|++||+.++....+++++.++++.+++.+++..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987665677778888889999999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
|||||||++||+++...+.+.|++..+|+|+|+++|+++.+..||++++|++|++++.|+++++..+ .+.|.+++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHHhc
Confidence 9999999999999999999999987678999999999999988999999999999999999999876 6777776653
No 125
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-44 Score=401.59 Aligned_cols=233 Identities=57% Similarity=0.925 Sum_probs=215.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. +.++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|+||+|.+|..|++||+.++....+.+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566777788888899999999999999999999999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHH
Q 000689 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++.. .+.|+.+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ--GGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc--Ccchhhh
Confidence 9999999999999999999999998789999999999999988999999999999999999999876 5666543
No 126
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-45 Score=379.60 Aligned_cols=223 Identities=36% Similarity=0.566 Sum_probs=192.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---HHHHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK---LRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~---~~~~r 503 (1350)
+|+++||+..||+ .+.+|+||||+|++||++||+||||||||||++.|.|+.+|++|+|.++|.++..++ .+.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 6999999999984 457999999999999999999999999999999999999999999999999998876 55678
Q ss_pred ccEEEEccCCCcccc-cHHHHhhcCCCCCCHH--H---HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 504 QQIGLVSQEPALFAT-TIKENILLGRPDADLN--E---IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~--~---~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
++|||++|++.|.+. |+.+|++.|+-....- . +....+...+.+.++++ |+....-.+..+|||||+|||+|
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaI 158 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAI 158 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHH
Confidence 899999999999866 9999999986532210 0 00011222334445555 76667777888999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||||+++|+|+|-|||+|+|||.+.+.|++.|+++. .|.|+|+.-|.++.+++ ||||+-|++|+|+..|+.+|+-+
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 999999999999999999999999999999999874 58999999999999975 99999999999999999999743
No 127
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.9e-44 Score=401.55 Aligned_cols=235 Identities=62% Similarity=1.001 Sum_probs=215.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+...+.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533347999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|+||+|.+|..|++||+.++....+.+++.+.++..++.+++..+|.|+++.+.....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566777778888899999999999999999998999999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHHHH
Q 000689 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|||||||++||+.+.+.+.+.|++..+|+|+|++||+++.+..||+|++|++|++++.|+++++... .+.++.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ--KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc--ChhHHHHh
Confidence 9999999999999999999999987778999999999999988999999999999999999999865 55555554
No 128
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-44 Score=396.72 Aligned_cols=221 Identities=38% Similarity=0.642 Sum_probs=207.7
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 568999999999743 2469999999999999999999999999999999999999999999999999998888899999
Q ss_pred cEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
++|+||+|.+|++|++|||.+... .+.+++.++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 5678899999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
++|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 999999999999999999999999988778999999999999989999999999999998863
No 129
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.5e-44 Score=417.65 Aligned_cols=232 Identities=36% Similarity=0.564 Sum_probs=194.3
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
+|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 489999999996321 246999999999999999999999999999999999999999999999999998877544 5
Q ss_pred hccEEEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|++||||||++.+|. .|++||+.++.. ..+.++..+. +.+.+..+ |+.......+.+||||||||++|||
T Consensus 81 r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~-----v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IAR 153 (343)
T TIGR02314 81 RRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRK-----VTELLALV--GLGDKHDSYPSNLSGGQKQRVAIAR 153 (343)
T ss_pred hcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999995 699999998642 1222222211 12223333 5555566778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|++++++..+.
T Consensus 154 AL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~p~ 233 (343)
T TIGR02314 154 ALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSHPK 233 (343)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcCCC
Confidence 99999999999999999999999999999998853 8999999999999976 99999999999999999999987654
Q ss_pred CcHHHHHHH
Q 000689 657 NGVYAKLIR 665 (1350)
Q Consensus 657 ~~~y~~l~~ 665 (1350)
...++.++.
T Consensus 234 ~~~~~~~~~ 242 (343)
T TIGR02314 234 TPLAQKFIR 242 (343)
T ss_pred cHHHHHHHh
Confidence 455555554
No 130
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-44 Score=383.99 Aligned_cols=210 Identities=38% Similarity=0.562 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH----H
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW----L 502 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~----~ 502 (1350)
++++||++.|.... ...+|+++||+|++||++||+||||||||||+++|.|+..|++|+|.++|.|+..++.+. .
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 246999999999999999999999999999999999999999999999999999887542 4
Q ss_pred hccEEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhc-CCCCCCChHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVR-ERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~-~~g~~LSgGqkqri~iA 578 (1350)
|++||||+|+..|++. |++|||.+... .....+..++ +.+....+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 5679999999999876 99999985321 1111111111 12222333 5654444 66889999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~ 644 (1350)
|||+.+|+|++.||||++||.++.+.|.+.+.++. .|+|+|+|||+......|||++.|++|++..
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999884 4899999999999999999999999999543
No 131
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.7e-44 Score=402.05 Aligned_cols=240 Identities=33% Similarity=0.539 Sum_probs=217.7
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH
Q 000689 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
...|.|+++|++++|+.. +..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.+...+
T Consensus 15 ~~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 93 (257)
T cd03288 15 GLGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTL 93 (257)
T ss_pred cCCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHH
Confidence 356789999999999742 2469999999999999999999999999999999999999999999999999988888888
Q ss_pred hccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 503 RQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|+.++||+|+|.+|++|++||+.+... ...+++.++.+..++.+.+..+|.|+++.+++.+.+||||||||++|||||+
T Consensus 94 ~~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 94 RSRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred hhhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999976432 2345667777788889999999999999999999999999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHH
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~ 662 (1350)
++|++|||||||++||+++++.+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. ++.|++
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~-~~~~~~ 251 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE-DGVFAS 251 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc-chHHHH
Confidence 9999999999999999999999999999887799999999999999889999999999999999999998753 566777
Q ss_pred HHH
Q 000689 663 LIR 665 (1350)
Q Consensus 663 l~~ 665 (1350)
++.
T Consensus 252 ~~~ 254 (257)
T cd03288 252 LVR 254 (257)
T ss_pred HHh
Confidence 664
No 132
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-44 Score=411.28 Aligned_cols=215 Identities=33% Similarity=0.598 Sum_probs=189.0
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++||+++|+ +..+++|+||+|++||+++|+|||||||||++++|+||..|++|+|.+||+++.+++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3699999999997 34699999999999999999999999999999999999999999999999999998876 468
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCC-C--CCHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRP-D--ADLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~-~--~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
||+|||+..||+. ||+|||.||.. . ...+ .+.++.+.. |+...-.+++.+|||||+|||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV-----------~L~~~~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELV-----------GLEGFADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHc-----------CchhhhhhChhhhChHHHHHHHH
Confidence 9999999999965 99999999975 1 1222 334444444 44445566778999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||..+|++||||||.||||.+-+..++..++++. .|.|.|+|||+-+... -+|||+||++|+|...|+++|+...
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999998874 4899999999998865 5999999999999999999999987
Q ss_pred cC
Q 000689 655 GE 656 (1350)
Q Consensus 655 ~~ 656 (1350)
+.
T Consensus 228 P~ 229 (352)
T COG3842 228 PA 229 (352)
T ss_pred cc
Confidence 53
No 133
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-44 Score=397.59 Aligned_cols=227 Identities=49% Similarity=0.853 Sum_probs=212.6
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
|.|+++|++++|+.. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|.+|+|.+||.++...+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~--~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDEK--KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCCC--CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 468999999999632 359999999999999999999999999999999999999999999999999988888889999
Q ss_pred cEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
++|+||+|.+|.+|++||+.++.+...++++.++++..++.+++..+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667888888999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++++++++
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999888765
No 134
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.3e-44 Score=362.66 Aligned_cols=208 Identities=34% Similarity=0.535 Sum_probs=180.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---HHHHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK---LRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~---~~~~r 503 (1350)
+|+|+||++.|++. .++|+||||+|++||++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+. ...+|
T Consensus 1 mI~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LR 78 (223)
T COG2884 1 MIRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLR 78 (223)
T ss_pred CeeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhh
Confidence 48999999999864 46999999999999999999999999999999999999999999999999998775 44699
Q ss_pred ccEEEEccCCCcccc-cHHHHhhcCCC--CCCH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHH
Q 000689 504 QQIGLVSQEPALFAT-TIKENILLGRP--DADL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~ 576 (1350)
++||+|+||.-|... ||.||++|... .... +++.++++.+++.+-...| +.+|||||+||++
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~l-----------P~~LSGGEQQRva 147 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARAL-----------PSQLSGGEQQRVA 147 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcC-----------ccccCchHHHHHH
Confidence 999999999988755 99999999643 1222 3344555555555444444 5689999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||||++.+|++||-||||.+|||++...|++.+.++. .|.||++.||+.+.+.. --|++.+++|+++....
T Consensus 148 IARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 148 IARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 9999999999999999999999999999999999884 69999999999999987 56999999999987543
No 135
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-44 Score=383.34 Aligned_cols=202 Identities=38% Similarity=0.554 Sum_probs=172.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.+++++|+++|++ ..+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|.++..- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 5899999999974 4699999999999999999999999999999999999999999999999987433 3479
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCCCC--HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPDAD--LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~~~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.||+ .||+||+.+|..... .++-.+ .+.+.+... |+...-+..+.+||||||||+||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~-----~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARE-----RAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHH-----HHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 99999999997 599999999876321 221111 223444444 77667777888999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC--CEEE
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQ--GSVS 643 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~--G~i~ 643 (1350)
+|+||+||||++|||+.|+..+++.+.++. .++|+++|||+++..-. +|||+||.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999999999999998875 47999999999999765 999999998 5553
No 136
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-44 Score=357.16 Aligned_cols=209 Identities=37% Similarity=0.590 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|.+++|.|+|...+ =.++++|++||++||+||||||||||+++|.||..|.+|+|.|+|+|....++.. +-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 67889999997432 2578999999999999999999999999999999999999999999988776643 5699
Q ss_pred EEccCCCcccc-cHHHHhhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 508 LVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+++||..||.- ||++||.+|... ...+.++.++...++..+..+||. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 99999999976 999999999642 124567778888888888887774 799999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++-|||+||||+|+|||.-+......+.++. ++.|+++|||.++.++. +|+++++++|+|.++|+.+++...
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998875 58899999999999876 999999999999999999998865
No 137
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-43 Score=396.91 Aligned_cols=233 Identities=55% Similarity=0.856 Sum_probs=212.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++.+..+.+++.++++...+.+.+..+|.|+++.+..++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998665556667777788888999999999999999999999999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~ 664 (1350)
|||||||++||+++.+.+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++... ...|+.++
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~ 233 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMW 233 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHH
Confidence 9999999999999999999999988668999999999999988999999999999999999988765 45555444
No 138
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-43 Score=396.91 Aligned_cols=226 Identities=62% Similarity=0.953 Sum_probs=208.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999743 236999999999999999999999999999999999999999999999999998777778888999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998665555667777777888999999999999999999999999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||||++||+.++..+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 9999999999999999999999998789999999999999988999999999999999999998765
No 139
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=4.5e-44 Score=415.48 Aligned_cols=225 Identities=31% Similarity=0.524 Sum_probs=193.2
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR 1158 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996421 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++|+||||++.+|. .|++||+.++.. ..+. +.+.++++.+++.++.... ..+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~-----------~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSY-----------PSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999995 799999987531 1222 3456777777776654443 3579999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+|||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 8999999999999966 99999999999999999999987
Q ss_pred cCCCchh-HHHH
Q 000689 1309 NNPDGCY-ARMI 1319 (1350)
Q Consensus 1309 ~~~~g~y-~~l~ 1319 (1350)
. |...+ .+++
T Consensus 231 ~-p~~~~~~~~~ 241 (343)
T TIGR02314 231 H-PKTPLAQKFI 241 (343)
T ss_pred C-CCcHHHHHHH
Confidence 6 44433 4443
No 140
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-43 Score=394.24 Aligned_cols=227 Identities=52% Similarity=0.865 Sum_probs=209.8
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++|+|++ ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 35899999999963 2359999999999999999999999999999999999999999999999999988887888899
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|.+|++||+.++.+....+++.++++..++.+++..+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999886655566777777888889999999999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++++.|+.+++..+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999998887654
No 141
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.4e-44 Score=388.69 Aligned_cols=214 Identities=35% Similarity=0.571 Sum_probs=193.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.++++|++|+|++ +++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.|+.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999974 4799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCc-cCcccHHHHhccCCCC---------CCHH-HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1162 AIVPQEPC-LFASTIYENIAYGHES---------ATES-EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~-LF~gTIreNL~~~~~~---------~td~-ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||||++. -|.-|++|=+.+|+-. ..|+ .+.+|++..++.++..+. -..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----------~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----------VDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----------ccccChhHHHHH
Confidence 99999974 5667999999888532 1133 478889999999886542 246999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhh-hhcCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTI-RNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti-~~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
.|||||.++|+||+||||||+||...+-.|++.++++. +|+|+|+|.|+++.. +.||++++|++|+|+.+|+|++.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999876 479999999999876 569999999999999999999998
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 65
No 142
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.9e-43 Score=396.04 Aligned_cols=227 Identities=74% Similarity=1.085 Sum_probs=207.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++..+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987655555666667777788889999999999999999999999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||||++||+.+.+.+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 9999999999999999999999887778999999999999988999999999999999999888765
No 143
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4e-43 Score=398.57 Aligned_cols=210 Identities=24% Similarity=0.335 Sum_probs=170.0
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
..+++.+|+|.|+..+. +.+++++++++.-+++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~y-~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSEY-QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcch-hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 36999999999975432 799999999999999999999999999999999999999999998876 789
Q ss_pred cEEEccCCccC-cccH--HHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCC-CCCChhHHHHHHHHHHh
Q 000689 1161 MAIVPQEPCLF-ASTI--YENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERG-VQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1161 i~~VpQdp~LF-~gTI--reNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G-~~LSgGQrQrlaiARAL 1236 (1350)
|+|-.|..+=| +-.+ -+-+.-..|..+++|+.+.|...|+..-+. -.+ ..||||||=|+++|-+.
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la-----------~~si~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELA-----------LQSIASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhh-----------hccccccCCcchhHHHHHHHh
Confidence 99999987643 2221 111111124458999999988887654332 222 46999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEe-cChhHHhhcCCCch
Q 000689 1237 VRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL-GSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1237 Lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~-Gt~~eLl~~~~~g~ 1314 (1350)
..+|.+|||||||..||.++-..+-++|+.+.. -||+|+|+.+.+.. |+.++|.++|+|.-. |. --.
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~G--GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~---------~~~ 566 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNFNG--GVVLVSHDEEFISSLCKELWVVEDGKVTPIEGG---------IDK 566 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhcCC--cEEEEECcHHHHhhcCceeEEEcCCcEEeeecc---------HHH
Confidence 999999999999999999999999999987544 69999999999987 999999999999862 21 114
Q ss_pred hHHHHHHhhh
Q 000689 1315 YARMIQLQRF 1324 (1350)
Q Consensus 1315 y~~l~~~q~~ 1324 (1350)
|.++...+..
T Consensus 567 yKkl~~~e~~ 576 (582)
T KOG0062|consen 567 YKKLLGAELR 576 (582)
T ss_pred HHHHHHHHHh
Confidence 6677665543
No 144
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-44 Score=388.42 Aligned_cols=219 Identities=37% Similarity=0.616 Sum_probs=192.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC-CCCHHHHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK-SLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~-~~~~~~~r~~ 505 (1350)
.++++|++|+|+++ .++|+|+||+|++|+.++|+|+||||||||+++|.|+++|++|+|.++|.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 58999999999864 57999999999999999999999999999999999999999999999999998 4788899999
Q ss_pred EEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 506 IGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+|||+|+| .+|..||.|.++||..+ .+.+++.+..+. .+... |+.....+...+||||||||+|||.+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~-----~l~~v--gl~~~~~r~p~~LSGGqkqRvaIA~vL 153 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAE-----ALELV--GLEELLDRPPFNLSGGQKQRVAIAGVL 153 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHH-----HHHHc--CchhhccCCccccCCcceeeHHhhHHH
Confidence 99999999 78999999999999763 333333322221 12222 555556677889999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+.+|++||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|+++++.++
T Consensus 154 a~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 154 AMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999864 5899999999999977 999999999999999999998765
No 145
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-44 Score=374.07 Aligned_cols=227 Identities=30% Similarity=0.494 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC-CHHHhhc
Q 000689 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY-NLKSLRR 1159 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~-~l~~lR~ 1159 (1350)
.++.+|+++.|+.+. ..++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 11599999999999999999999999999999999999999999999999876543 3446788
Q ss_pred ccEEEccCCc--cC-cccHHHHhccC----CCCCCHHHHHHHHHHhccHHH-HhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1160 HMAIVPQEPC--LF-ASTIYENIAYG----HESATESEIIEAARLANADKF-ISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp~--LF-~gTIreNL~~~----~~~~td~ei~~al~~a~l~~~-I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
.+.+|+|||. |= .-||++-|.-+ .-+-...+++++++.+++.+- ..+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999995 21 23666665422 122345568999999998753 33444 579999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||.-+|++||||||||+||.-.++.|++.+.+..+ +-|.|+|||+++.+.+ ||||+||++|+++|.++-++++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998876 4599999999999988 99999999999999999999987
Q ss_pred cCCCchhHHHHH
Q 000689 1309 NNPDGCYARMIQ 1320 (1350)
Q Consensus 1309 ~~~~g~y~~l~~ 1320 (1350)
. +.-.|.+..-
T Consensus 232 ~-~~h~ytr~Ll 242 (252)
T COG1124 232 H-PSHPYTRELL 242 (252)
T ss_pred C-CccHHHHHHH
Confidence 6 5666766543
No 146
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-44 Score=401.44 Aligned_cols=218 Identities=37% Similarity=0.652 Sum_probs=197.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+.+|.+. .+|+|+||+|+.||.++|+|||||||||++++|.||.+|++|+|.|||.|++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2999999999999999999999999999999999999999999999999999999886 789
Q ss_pred EEEccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
++|+|+..||.. ||+|||.|+... .-++++.++++..++.+++.+.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999998542 22567889999999999988876 579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++++||||.|+||++....+..-|+++.+ |.|+|.|||+....+. +|||+||++|+|.+.|+|.|+..+ |
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~-P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER-P 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC-c
Confidence 99999999999999999999999999999988543 7899999999998866 999999999999999999999987 5
Q ss_pred CchhH
Q 000689 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|-
T Consensus 226 ~n~fV 230 (338)
T COG3839 226 ANLFV 230 (338)
T ss_pred cchhh
Confidence 65553
No 147
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-43 Score=371.51 Aligned_cols=227 Identities=33% Similarity=0.521 Sum_probs=183.9
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC-CHHHHhc
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL-KLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~-~~~~~r~ 504 (1350)
+++++|+++.|+... -.++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997432 12499999999999999999999999999999999999999999999999877554 3346788
Q ss_pred cEEEEccCCC--ccc-ccHHHHhhcCCCC----CCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHHH
Q 000689 505 QIGLVSQEPA--LFA-TTIKENILLGRPD----ADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 505 ~i~~v~Q~~~--lf~-~ti~eNi~~g~~~----~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri~ 576 (1350)
.|.+|||||. |-+ -||++-|.=+... ...+++.++++.. |+. .....++.+||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~V-----------gL~~~~l~R~P~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQV-----------GLPPSFLDRRPHELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHc-----------CCCHHHHhcCchhcChhHHHHHH
Confidence 9999999995 322 3777766433211 1122233333333 333 3456778899999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||.-+|++||||||||+||+.....|++.+.++.+ +-|.|+|||+++.+.+ ||||+||++|+|+|.++.+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999999998875 5599999999999987 99999999999999999999987
Q ss_pred ccCCcHHHHHH
Q 000689 654 KGENGVYAKLI 664 (1350)
Q Consensus 654 ~~~~~~y~~l~ 664 (1350)
.+...+-+.|.
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 74333333333
No 148
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-43 Score=368.67 Aligned_cols=224 Identities=33% Similarity=0.518 Sum_probs=193.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---Hhh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR 1158 (1350)
.|++++|+++|.++ .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++-+ .+|
T Consensus 8 ~I~vr~v~~~fG~~---~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFGDR---VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecCCE---EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 59999999999644 799999999999999999999999999999999999999999999999999988764 579
Q ss_pred cccEEEccCCccCcc-cHHHHhccCCC---CCCHHHHH----HHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1159 RHMAIVPQEPCLFAS-TIYENIAYGHE---SATESEII----EAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~---~~td~ei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+++|+++|...||+. ||+||+.+.-. +.+++++. ..++.+|+..-+.. .-.+.||||.+.|+
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~----------~~PsELSGGM~KRv 154 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAAD----------LYPSELSGGMRKRV 154 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhh----------hCchhhcchHHHHH
Confidence 999999999999976 99999998532 23444443 34555666554221 22467999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|||||+.-+|+||++|||||+|||.+...+-+.|+++.+ |.|+|+|||+++++.. ||||+++.+|+|+..|++++|.
T Consensus 155 aLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~ 234 (263)
T COG1127 155 ALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELL 234 (263)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999988764 8899999999999977 8999999999999999999999
Q ss_pred hcCCCchhHHHH
Q 000689 1308 KNNPDGCYARMI 1319 (1350)
Q Consensus 1308 ~~~~~g~y~~l~ 1319 (1350)
+. ++-...+++
T Consensus 235 ~s-d~P~v~qf~ 245 (263)
T COG1127 235 AS-DDPWVRQFF 245 (263)
T ss_pred hC-CCHHHHHHh
Confidence 86 355444444
No 149
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.2e-43 Score=387.96 Aligned_cols=220 Identities=37% Similarity=0.585 Sum_probs=204.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++++|+.. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 458999999999742 2469999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|+.|++||+.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 4566788888888999999999999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
+++||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999998875
No 150
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.2e-43 Score=387.11 Aligned_cols=220 Identities=41% Similarity=0.727 Sum_probs=203.2
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
|+|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 2469999999999999999999999999999999999999999999999999988887778899
Q ss_pred cEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
++|+||+|.+|..|++||+.++....+.+++.++++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999899999998765444566788889999999999999999999999888999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEec
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~G 1301 (1350)
++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999987668999999999988789999999999998865
No 151
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-43 Score=404.46 Aligned_cols=221 Identities=27% Similarity=0.468 Sum_probs=188.1
Q ss_pred cEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC-------
Q 000689 1082 EVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY------- 1152 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~------- 1152 (1350)
.|+++||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ---------CHHHhhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhccHHHHhcCCCCcc-ccccCC
Q 000689 1153 ---------NLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYK-TFVGER 1218 (1350)
Q Consensus 1153 ---------~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~ei~~al~~a~l~~~I~~lp~Gld-t~vge~ 1218 (1350)
+...+|++++||+|+| .+|..|++|||.++.. ..++++..+ . +.+++..+ |++ ...+..
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~---~--~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK---L--AKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH---H--HHHHHHHc--CCChhHhcCC
Confidence 3567899999999998 6899999999987632 234443322 1 12344444 453 346677
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCCe
Q 000689 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGK 1296 (1350)
Q Consensus 1219 G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~Gr 1296 (1350)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|++.. +|+|+|+|||+++.+. .||||+||++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 88999999999999999999999999999999999999999999998764 5899999999999874 599999999999
Q ss_pred EEEecChhHHhhc
Q 000689 1297 VAELGSHSHLLKN 1309 (1350)
Q Consensus 1297 IvE~Gt~~eLl~~ 1309 (1350)
|++.|+|++++..
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999988754
No 152
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-43 Score=385.11 Aligned_cols=215 Identities=36% Similarity=0.637 Sum_probs=195.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC-CCCHHHhhcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR-KYNLKSLRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~-~~~l~~lR~~ 1160 (1350)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|++.|++|+|.+||.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred cEEEccCC--ccCcccHHHHhccCCCC--CCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEP--CLFASTIYENIAYGHES--ATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp--~LF~gTIreNL~~~~~~--~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+|+|+|+| .+|..||.+.++||..+ .+.+| +.++++.+++.++.... ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 79999999999998542 44444 66778888888774443 36799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|.+|..+|+|||||||||+||+...+.+.+.++++.+ |+|+|+|||+++.+.. |||++||++|+++.+|+|++++++
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999764 5899999999999988 999999999999999999999876
No 153
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-43 Score=403.83 Aligned_cols=222 Identities=30% Similarity=0.473 Sum_probs=189.9
Q ss_pred ceEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC------
Q 000689 426 GLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL------ 497 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~------ 497 (1350)
..|+++|++|+|++.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3699999999997421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhccEEEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcC
Q 000689 498 ----------KLRWLRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRE 562 (1350)
Q Consensus 498 ----------~~~~~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~ 562 (1350)
....+|++||||+|+| .+|+.||+|||.++.. ..+.++.. +. +.+.+..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~---~~--~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAK---KL--AKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHH---HH--HHHHHHHc--CCChhHhcC
Confidence 3457889999999998 6899999999998742 22333222 11 23445555 664 56788
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCC
Q 000689 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQG 640 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G 640 (1350)
.+.+||||||||++|||||+.+|+||||||||++||+.+++.+.+.|.++. +|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 899999999999999999999999999999999999999999999998874 5899999999999875 59999999999
Q ss_pred EEEEecChHHHHhc
Q 000689 641 SVSEIGTHDELIAK 654 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~ 654 (1350)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998764
No 154
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.1e-43 Score=353.97 Aligned_cols=208 Identities=30% Similarity=0.529 Sum_probs=187.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~lR~ 1159 (1350)
|+|+||+.+|+.. .++|+||||+|++||.+=|+|||||||||++++|++...|++|+|.++|.|+..+.- --||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999865 579999999999999999999999999999999999999999999999999987764 45999
Q ss_pred ccEEEccCCccC-cccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCLF-ASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF-~gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+||+|+||-.|. +-|+.||+++.-. ... .+.+.++++.+|+.+-...|| ..|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 999999999766 5699999997642 122 345788999999999999998 4799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecCh
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||++.+|++||-||||-+|||++...|++.+.+.- .|.|||+.||+.+.+.. --|++.+++||++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998864 69999999999999977 578999999999976554
No 155
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1e-42 Score=386.82 Aligned_cols=219 Identities=52% Similarity=0.828 Sum_probs=201.1
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhh
Q 000689 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR 1158 (1350)
..|.++++|++++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999754334699999999999999999999999999999999999999999999999999888888888
Q ss_pred cccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
++++|+||+|.+|.+|++||+.++......+++++.++...+++++..+|.|+++.+.+...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998755445556666667788899999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeE
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrI 1297 (1350)
+|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778999999999999988999999999975
No 156
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-42 Score=376.40 Aligned_cols=210 Identities=33% Similarity=0.551 Sum_probs=181.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|.++ ++|+||||++++|++++|+||||||||||+|+|+|+.+|.+|+|.+.|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999743 59999999999999999999999999999999999999999999999988765432 4579
Q ss_pred EEEccCC---CcccccHHHHhhcCCCCC----------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 507 GLVSQEP---ALFATTIKENILLGRPDA----------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 507 ~~v~Q~~---~lf~~ti~eNi~~g~~~~----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
|||||.. |-|+-||+|-+.+|+... +.+++.++++.+++.++ ......+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-----------~~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-----------RDRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-----------hCCcccccCcHHHH
Confidence 9999964 568899999999985421 23566677777665554 34455689999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++++ |+||++||||++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999864 9999999999999865 99999995 568889999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 764
No 157
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2e-42 Score=383.07 Aligned_cols=220 Identities=46% Similarity=0.742 Sum_probs=200.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|.|+++|++++|++. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999887777777889
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
++|++|++.+|..|++||+.++.+....+++.+.++..++.+.+..+|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999889999999875544555677778888888899999999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999886668999999999988779999999999998754
No 158
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-43 Score=363.90 Aligned_cols=222 Identities=30% Similarity=0.506 Sum_probs=194.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHhh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~---l~~lR 1158 (1350)
.|+++||+.+||+ ++.+|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|.++|.++.... +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 457999999999999999999999999999999999999999999999999998887 67788
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCCC-----------CC---HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHES-----------AT---ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~~-----------~t---d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
++||+|+|.|-|-. -|+.+|+..|.-. .+ .....+|++.+++.++... +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 99999999998875 4999999766422 22 2346788888888876543 456799
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEe
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~ 1300 (1350)
|||+||++|||||..+|+|++-|||+|+|||++.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|||+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999864 58999999999999866 999999999999999
Q ss_pred cChhHHhhcCCCchhHHHHH
Q 000689 1301 GSHSHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1301 Gt~~eLl~~~~~g~y~~l~~ 1320 (1350)
|++++|-+ ..+...|.
T Consensus 230 g~~~el~~----~~~~~iYg 245 (258)
T COG3638 230 GPASELTD----EALDEIYG 245 (258)
T ss_pred CChhhhhH----HHHHHHhc
Confidence 99999643 34444444
No 159
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-43 Score=390.02 Aligned_cols=213 Identities=34% Similarity=0.538 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~lR~ 1159 (1350)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 369999999999999999999999999999999999999999999999999987764 56789
Q ss_pred ccEEEccCCccCcc-cHHHHhccCCC---CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1160 HMAIVPQEPCLFAS-TIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~g-TIreNL~~~~~---~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
+++||||+|.+|.. |++||+.++.. ..+.+ ++.++++..++.++. .....+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 99999999999986 99999986521 12322 344455555554433 2333579999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+++|+||||||||++||+.+...+.+.|++..+ |+|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 8999999999999876 99999999999999999999875
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 160
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.6e-43 Score=388.20 Aligned_cols=212 Identities=35% Similarity=0.605 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccC-----CCCccEEEECCccCCCCC--HH
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFY-----EPSSGRVMIDGKDIRKYN--LK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~-----~p~~G~I~iDG~di~~~~--l~ 1155 (1350)
|+++||+++|+.+ ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGDK---HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCCc---eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 5789999999643 6999999999999999999999999999999999999 999999999999998776 66
Q ss_pred HhhcccEEEccCCccCcccHHHHhccCCCC--C-----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHES--A-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~-----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++|+||++.+|..|++||+.++... . .++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999865321 1 12345667777777655443221 4679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|++|||||+++|++|||||||++||+++.+.+.+.|++..+.+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999987655899999999999865 999999999999999998764
No 161
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.9e-42 Score=384.70 Aligned_cols=220 Identities=51% Similarity=0.835 Sum_probs=198.2
Q ss_pred CCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH
Q 000689 423 SVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 423 ~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~ 502 (1350)
...++|+++|++++|+++...++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+
T Consensus 7 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 86 (226)
T cd03248 7 HLKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYL 86 (226)
T ss_pred CcCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHH
Confidence 34578999999999975323469999999999999999999999999999999999999999999999999887777778
Q ss_pred hccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 503 RQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
++.++|++|++.+|+.|++||+.++.......++.+.+....+.+++..+|.|+++.+.+.+.+||||||||++|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~ 166 (226)
T cd03248 87 HSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALI 166 (226)
T ss_pred HhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHh
Confidence 88999999999999999999999876544444555555556778899999999999999999999999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i 642 (1350)
++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 167 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 167 RNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999988778999999999999988999999999974
No 162
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-43 Score=377.08 Aligned_cols=219 Identities=34% Similarity=0.535 Sum_probs=180.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCe---eCCCCCHHHHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGH---DIKSLKLRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~---~~~~~~~~~~r 503 (1350)
+|+++|+++.|+. .++++|||++|+.||.+|+.||||||||||+++|+|+..|++|+|.+||. |.++.. .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 4788999999974 35899999999999999999999999999999999999999999999999 555533 334
Q ss_pred ccEEEEccCCCccc-ccHHHHhhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 504 QQIGLVSQEPALFA-TTIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
++||+|+|+..||. .||++||+||.+-. ...+.....+. .+.+.-+ .++..-...+.+||||||||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv---~elL~lv--qL~~la~ryP~QLSGGQrQRVALARA 151 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARV---EELLRLV--QLEGLADRYPAQLSGGQRQRVALARA 151 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHH---HHHHHHh--cccchhhcCchhcChHHHHHHHHHHH
Confidence 67999999999995 59999999997311 01111111111 1222111 33334456678999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
|..+|++||||||++|||++..+.+..-|+++. -|.|+++|||+.+.+.. ||||+||++|+|...|+++|+...+
T Consensus 152 LA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P 229 (345)
T COG1118 152 LAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHP 229 (345)
T ss_pred hhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCC
Confidence 999999999999999999999999999998874 38999999999998765 9999999999999999999998775
No 163
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-42 Score=345.23 Aligned_cols=209 Identities=35% Similarity=0.574 Sum_probs=189.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|.+++|.|+|...| =.++++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 56889999996543 368999999999999999999999999999999999999999999999887765 45799
Q ss_pred EEccCCccCcc-cHHHHhccCCCC------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
+++||.-||.- ||++|+.+|... ...+.+..++..+|+.+|..+|| ..||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999976 999999988532 23456889999999999999998 3699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|+|+-|||+||||.|+|||.-..++...+...+ ++.|+++|||.++.++. +||++++++|||+++|+-++++..
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998876 47899999999999866 999999999999999999999876
No 164
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=7.8e-39 Score=381.70 Aligned_cols=467 Identities=15% Similarity=0.133 Sum_probs=344.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHhccCChhHH------HHHHHHHHHHHHHHHHHH
Q 000689 152 YFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDV------VYAINTDAVIVQDAISEK 225 (1350)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~G~l------~sr~~~D~~~i~~~~~~~ 225 (1350)
.+.+++++..+....+.++-.....+.-.-|-..+.++-+....-|+.. ..|.+ =.|+..|+...-+.....
T Consensus 91 ~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~--~~~~~~~~dNpDQRi~eDi~~~t~~t~~l 168 (604)
T COG4178 91 VFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA--QAGGIGLIDNPDQRIQEDIRNFTETTLDL 168 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH--hcccccCCCChHHhHHHHHHHHHhhHHHH
Confidence 3434444444444455554443444444444445556656655334332 33322 268999999888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 226 LGNFIHYLATFVTGFAVGFSA---------------VWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIV 290 (1350)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~---------------~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (1350)
...++.++++++.-.+++..+ .-.+..++++.+++..++..++++.+.++..+.++..++.-...
T Consensus 169 ~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~L 248 (604)
T COG4178 169 SFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSL 248 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHH
Confidence 777777776655444443311 11223344445555556666788888888888888888888888
Q ss_pred HHHHchHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHH
Q 000689 291 EQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIAT 370 (1350)
Q Consensus 291 ~E~l~~i~~vk~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~ 370 (1350)
...-++...|-.|+.|+.+.++.++......+...+......-...+.....+++.++-+..++-....|.++.|.++..
T Consensus 249 vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa 328 (604)
T COG4178 249 VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQA 328 (604)
T ss_pred HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHH
Confidence 88999999999999999999887777766665544444333333333333444444444455566677899999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CCCC-CCCC-CccC---CCCcceEEEEEEEEECCCCCCC
Q 000689 371 MFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRIIDHKP--SIDR-NSES-GLEL---DSVSGLIELKHVDFSYPSRPEV 443 (1350)
Q Consensus 371 ~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~--~~~~-~~~~-~~~~---~~~~g~i~~~~v~f~y~~~~~~ 443 (1350)
..++......++.+...+..+..-++...|+.++.+.-. +.+. .... +... ...+..|+++|++..-|+. .
T Consensus 329 ~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~ 406 (604)
T COG4178 329 VGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--Q 406 (604)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--C
Confidence 877777777888999999999999999999999864221 0000 0000 0000 1114689999999998853 3
Q ss_pred ccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHH
Q 000689 444 RILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKEN 523 (1350)
Q Consensus 444 ~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eN 523 (1350)
..|+++||++++|+.+-|.||||||||||++.|+|+++--+|+|..-.. ..+-|+||.|++-.||.||-
T Consensus 407 ~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre~ 475 (604)
T COG4178 407 TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLREA 475 (604)
T ss_pred eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHHH
Confidence 6899999999999999999999999999999999999999999977621 25899999999999999999
Q ss_pred hhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHH
Q 000689 524 ILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSES 601 (1350)
Q Consensus 524 i~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~ 601 (1350)
|+|.+.. .+++++.+++.++++.+++.++.+- ..-...||+|||||||+||.|+++|++++|||+|||||+++
T Consensus 476 l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~ 550 (604)
T COG4178 476 LCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEET 550 (604)
T ss_pred HhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHH
Confidence 9998764 7899999999999999999887432 22445799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 000689 602 EKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQ 638 (1350)
Q Consensus 602 ~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~ 638 (1350)
|..+.+.+++...+.|+|-|.||.......++.+-+.
T Consensus 551 e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 551 EDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999889999999999998887766655554
No 165
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-42 Score=394.98 Aligned_cols=217 Identities=30% Similarity=0.521 Sum_probs=191.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999742223599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+||+|+| .++..|++|||.++.. ..+ ++.+.++++..++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4667899999987632 123 234677778888876655443 57999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||||++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 8999999999999988999999999999999999998765
No 166
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-42 Score=403.90 Aligned_cols=218 Identities=31% Similarity=0.473 Sum_probs=186.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999887654 4689
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|+ .||+|||.|+... .+..+..+ .+.+.+..+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999997531 22222211 112233333 55555666778999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999999998753 8999999999998865 9999999999999999999998764
No 167
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-42 Score=388.26 Aligned_cols=218 Identities=30% Similarity=0.511 Sum_probs=191.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHhh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~iDG~di~~~~l~~lR 1158 (1350)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999964 369999999999999999999999999999999999985 6999999999999988888889
Q ss_pred cccEEEccCCccCcccHHHHhccCCC--------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1159 RHMAIVPQEPCLFASTIYENIAYGHE--------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~--------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+|.+|..|++||+.++.. ...++++.++++..++.+++.. ...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999987521 1122345667777777655432 23456678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988779999999999998865 999999999999999999999865
No 168
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-42 Score=402.69 Aligned_cols=225 Identities=29% Similarity=0.480 Sum_probs=189.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 6999999999963 3589999999999999999999999999999999999999999999999999876643 5789
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|+. |++|||.|+... .+.++..+. +.+.+..+ |+.......+.+||||||||++|||||+.
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELV--DLAGFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999975 999999997431 222222211 12222222 45555566778999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccCCcHH
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGENGVY 660 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y 660 (1350)
+|++||||||||+||+.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++.+...
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~~~~~ 233 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPASRFM 233 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCchHH
Confidence 9999999999999999999999999998853 8999999999999865 999999999999999999999877543333
Q ss_pred HHH
Q 000689 661 AKL 663 (1350)
Q Consensus 661 ~~l 663 (1350)
+++
T Consensus 234 a~~ 236 (351)
T PRK11432 234 ASF 236 (351)
T ss_pred HHh
Confidence 443
No 169
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=369.00 Aligned_cols=198 Identities=33% Similarity=0.563 Sum_probs=176.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.+++++|+.+|+. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999975 4799999999999999999999999999999999999999999999999988543 4578
Q ss_pred EEEccCCccCcc-cHHHHhccCCCCC------CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHESA------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~------td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||+|++.||.- |+++|+.++.... ..+.+.+.++.+|+.+|-...| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 999999999986 9999999875421 2345778888999988877776 579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeC--CeEE
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDD--GKVA 1298 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~--GrIv 1298 (1350)
||+.+|+||+||||.+|||+.|...+|+-+.+.. .++||++|||++++... +|||+||.+ |+|.
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 9999999999999999999999999999998865 46999999999998755 999999999 5553
No 170
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=373.35 Aligned_cols=210 Identities=30% Similarity=0.530 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+++++|+..|++|+|.++|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999643 59999999999999999999999999999999999999999999999998876533 5789
Q ss_pred EEEccCC---ccCcccHHHHhccCCCC----------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1162 AIVPQEP---CLFASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1162 ~~VpQdp---~LF~gTIreNL~~~~~~----------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
|||||.. .-|.-||+|=+.+|... .+.+++.+|++.+++.++..+ ++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHH
Confidence 9999965 34788999999877421 124789999999999988643 354 59999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS-GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|+.|||||+.+|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. +|+|+.|+ ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 9999999999999866 99999885 678899999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 864
No 171
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-42 Score=384.27 Aligned_cols=217 Identities=35% Similarity=0.549 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r~ 504 (1350)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 359999999999999999999999999999999999999999999999999887664 56788
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
.|+||+|++.+|+. |++||+.++.. ..+.++..+. +.+.+..+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 99999999999986 99999988632 1222222211 12233333 55555566778999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|+||||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999999999999999999999999999875 38999999999999876 999999999999999999998754
No 172
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9.5e-39 Score=380.98 Aligned_cols=474 Identities=16% Similarity=0.153 Sum_probs=342.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccc---CChHHHHHHHHhhHHHHHHHHHH
Q 000689 802 YCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEE---NESARIAARLALDANNVRSAIGD 878 (1350)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~---~~~G~i~~rl~~D~~~v~~~~~~ 878 (1350)
...+|.+++.+..++...+.|+-.....++-.-+-+.+.++-+...-.||-... +.+-..=.|+..|+...-+....
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 345666777777777888888888888888888888888888887755543221 11123446888998888776666
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH
Q 000689 879 RIQVIVQNTALMLVACTAGF---------------VLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQL 943 (1350)
Q Consensus 879 ~l~~~i~~~~~~i~~~~~~~---------------~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 943 (1350)
....++.+++.++....++. .+...+.++++..+++..+..++..+.+.+..-+.++.++..+..
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 66666666655554444332 112222333333333333334444444445555666677777888
Q ss_pred HHHHHccHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHH
Q 000689 944 AGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIR 1023 (1350)
Q Consensus 944 ~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 1023 (1350)
+...-++.+.|..|+-|+...++..+..+.......+..........+.....++...+-+..++.....|.+++|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888999999999999887766555554443322222111111111122222233333344445556789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC--CCCCCCC--CCC--CCCCCCcEEEEEEEEECCCCCC
Q 000689 1024 VFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEI--EPDDPDA--TPV--PDRLRGEVELKHVDFSYPSRPD 1097 (1350)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~v~~~~~~~~~~--~~~~~~~--~~~--~~~~~g~I~f~nVsf~Y~~~~~ 1097 (1350)
...++......++-+....+.+..-.+...|+.++.+.-... ++..+.. ... .......|+|+|++..-|..
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 999999888999999999999999999999998875432211 1000000 000 01114679999999998854
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHH
Q 000689 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYE 1177 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIre 1177 (1350)
.+.|+++||+|+|||.+-|.|+||||||||+++|.|+++--+|+|-+-. -+++-++||.|.+-.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHH
Confidence 3789999999999999999999999999999999999999999987641 13578999999999999999
Q ss_pred HhccCCCC--CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHH
Q 000689 1178 NIAYGHES--ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAE 1255 (1350)
Q Consensus 1178 NL~~~~~~--~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~ 1255 (1350)
-|.|.+.. .+|+|+.+++.+++|.++++++.+ . ..-..-||+||||||++||.||++|++++|||||||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-E----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-c----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998754 899999999999999999998743 1 2234569999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEe
Q 000689 1256 SERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVID 1293 (1350)
Q Consensus 1256 te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~ 1293 (1350)
+|..+.+.+++...+.|+|.|+||.......++.+-++
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999999999999999988877666655443
No 173
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.2e-42 Score=366.68 Aligned_cols=207 Identities=35% Similarity=0.543 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHh-
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSL- 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~l- 1157 (1350)
++++||+..|.... ..++|+++||+|++||.|||+||||||||||+++|.++-.|++|+|.++|.|+..++. ..+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 2469999999999999999999999999999999999999999999999999999874 334
Q ss_pred hcccEEEccCCccCcc-cHHHHhccC----CCCC--CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1158 RRHMAIVPQEPCLFAS-TIYENIAYG----HESA--TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~g-TIreNL~~~----~~~~--td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++||+|+|+..|++. |++||+.+. .... ..+.+.+.++..++.+.... ....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~----------~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLK----------KKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhcc----------CCchhcCHHHHHHH
Confidence 4579999999988764 999999842 2211 13344555555666654431 23467999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEEE
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE 1299 (1350)
||||||+.+|+|++.||||.+||++|.+.|.+.+++.. .|+|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999874 3899999999999999999999999999544
No 174
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-39 Score=353.73 Aligned_cols=475 Identities=19% Similarity=0.259 Sum_probs=358.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccccCChHHHHHHHHhhHHHHHHHHHHHHHH
Q 000689 803 CYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQV 882 (1350)
Q Consensus 803 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ffd~~~~~~G~i~~rl~~D~~~v~~~~~~~l~~ 882 (1350)
+..++++.++..+...+.......+|++...++|.++.++++.+|+.-+++ -..++++.++++|+.++. +-...++.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier--~~~~rlla~L~~Dvr~IS-f~~s~lp~ 127 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER--LGSARLLAGLTSDVRNIS-FAFSRLPE 127 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH--hcccchhhhhccccccee-ehHhhhHH
Confidence 334455555556666777778889999999999999999999999999876 678999999999999998 66677888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHccHHHHHHhhh--H
Q 000689 883 IVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNS--E 960 (1350)
Q Consensus 883 ~i~~~~~~i~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~--e 960 (1350)
+.+..+.+++++....+.++++.+++...+.+.++..++......+..+..++...+...+.+..++|.+..+...- +
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 99999999999999999999988877777666666655554444444555667777888899999999998776542 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000689 961 LMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLT 1040 (1350)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 1040 (1350)
..+.+.|...-+...+...+..........+++.+++....+.+|+...+. .-+.....+..+++.+...++.++..
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vg 284 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVG 284 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHh
Confidence 333344433332222222222222223445566677777777777665432 22222333455667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccCCCCCCCCCCCCCCCCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCC
Q 000689 1041 LAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPS 1120 (1350)
Q Consensus 1041 ~~~~~~~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~S 1120 (1350)
..|.+..+..+.+++.++-..++..+ -+.+.+.| .-..||++||.|+|+.. .--+..||++|++||.|=|+|.|
T Consensus 285 ilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p--~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~N 358 (546)
T COG4615 285 ILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFP--DWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGN 358 (546)
T ss_pred hhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCC--cccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCC
Confidence 99999999999999988654332211 11111222 23469999999999743 24578899999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcccHHHHhccCCCC-CCHHHHHHHHHHhc
Q 000689 1121 GCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES-ATESEIIEAARLAN 1199 (1350)
Q Consensus 1121 GSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-~td~ei~~al~~a~ 1199 (1350)
||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++ +.+. ++++.+..-++.-.
T Consensus 359 GsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLe 432 (546)
T COG4615 359 GSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLE 432 (546)
T ss_pred CCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998764 3333 56666655554443
Q ss_pred cHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHh--cCCceEEEEe
Q 000689 1200 ADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRA--CSGKTTIVVA 1277 (1350)
Q Consensus 1200 l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~--~~g~TvI~Ia 1277 (1350)
+.... ++.+|-=+ ...||-|||.|+|+--|++.+.+|++|||=-+--||.=.+...+.+--. ..|||++.||
T Consensus 433 l~~kt-sl~d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIs 506 (546)
T COG4615 433 LAHKT-SLNDGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAIS 506 (546)
T ss_pred Hhhhh-cccCCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEe
Confidence 33322 12222111 1359999999999999999999999999999999999999988876543 3699999999
Q ss_pred cCchhhhhcCEEEEEeCCeEEEec
Q 000689 1278 HRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1278 HRlsti~~~DrI~Vl~~GrIvE~G 1301 (1350)
|+-.-...|||++-|++|+++|.-
T Consensus 507 HDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 507 HDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred cCchhhhhHHHHHHHhcCceeecc
Confidence 999999999999999999999853
No 175
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-42 Score=402.10 Aligned_cols=230 Identities=37% Similarity=0.580 Sum_probs=192.1
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
+|+++|++|+|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 478999999997211 346999999999999999999999999999999999999999999999999998876543 4
Q ss_pred hccEEEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|++||||+|++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++......+.+||||||||++|||
T Consensus 81 ~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAr 153 (343)
T PRK11153 81 RRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIAR 153 (343)
T ss_pred hcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 788999999999986 599999988632 122222211 123344444 6666667778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+.+|+||||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...+.
T Consensus 154 aL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~ 233 (343)
T PRK11153 154 ALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPK 233 (343)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998753 8999999999999876 99999999999999999999986533
Q ss_pred CcHHHHH
Q 000689 657 NGVYAKL 663 (1350)
Q Consensus 657 ~~~y~~l 663 (1350)
...+..+
T Consensus 234 ~~~~~~~ 240 (343)
T PRK11153 234 HPLTREF 240 (343)
T ss_pred cHHHHHH
Confidence 3333333
No 176
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-42 Score=383.60 Aligned_cols=224 Identities=31% Similarity=0.560 Sum_probs=192.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCCccCcccHHHHhccCCC--CCCHHHHHHHHHHhccH-HHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1162 AIVPQEPCLFASTIYENIAYGHE--SATESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~~--~~td~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
+|+||+|.+|..|++||+.++.. ...++++.+.++..++. ++ ......+||||||||++||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~LS~G~~qrl~la~al~~ 148 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY-----------ATRDVKNLSGGEAQRVSIARTLAN 148 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH-----------hhCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999987532 11233455555555553 22 234456899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchh
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCY 1315 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y 1315 (1350)
+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++++.. +...|
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~ 227 (241)
T PRK14250 149 NPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN-PQNEV 227 (241)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC-CCcHH
Confidence 999999999999999999999999999864 38999999999999875 999999999999999999999865 34456
Q ss_pred HHHHH
Q 000689 1316 ARMIQ 1320 (1350)
Q Consensus 1316 ~~l~~ 1320 (1350)
.+.+.
T Consensus 228 ~~~~~ 232 (241)
T PRK14250 228 TKLFI 232 (241)
T ss_pred HHHHH
Confidence 55443
No 177
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-43 Score=395.40 Aligned_cols=221 Identities=34% Similarity=0.593 Sum_probs=198.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 699999999996 35799999999999999999999999999999999999999999999999999998887 5789
Q ss_pred EEEccCCccCc-ccHHHHhccCCC---CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHE---SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~---~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
++|+|+..||+ .||+||+.||.. ...+ +.+.++++.+++.++-.+.| .+|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 99999999996 599999999864 1222 36788999999998876655 67999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhhcC
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNN 1310 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~~~ 1310 (1350)
|||..+|++|+||||-|+||.+-...++.-+++.. .|.|.|.|||+-+... -+|||+||++|+|...|+|+|+..+
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~- 227 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER- 227 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC-
Confidence 99999999999999999999999999999998864 3899999999999865 4999999999999999999999987
Q ss_pred CCchhHHHH
Q 000689 1311 PDGCYARMI 1319 (1350)
Q Consensus 1311 ~~g~y~~l~ 1319 (1350)
|...|-.-+
T Consensus 228 P~~~fVA~F 236 (352)
T COG3842 228 PATRFVADF 236 (352)
T ss_pred cchHHHHHH
Confidence 666664433
No 178
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.7e-42 Score=373.97 Aligned_cols=204 Identities=35% Similarity=0.632 Sum_probs=183.9
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhc
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRR 1159 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~ 1159 (1350)
.+.++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 4679999999999743 236999999999999999999999999999999999999999999999999998888888999
Q ss_pred ccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1160 HMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
+++||||+|.+|++|+++|+.+... .+++++.++++ +......|||||+||++||||++++
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999986542 45555544443 2345678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecCh
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|+||||||||++||+++...+.+.|++..+|+|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999998778999999999999988999999999999999875
No 179
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.9e-42 Score=401.61 Aligned_cols=217 Identities=30% Similarity=0.510 Sum_probs=189.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5899999999973 3589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|+ .||+|||.|+... .+.++.. ..+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999996 5999999997432 1222221 1223444554 67777778889999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.+++.+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999999998753 8999999999999865 9999999999999999999999875
No 180
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.2e-42 Score=401.83 Aligned_cols=215 Identities=33% Similarity=0.528 Sum_probs=182.9
Q ss_pred CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH----hccEEEEccCCCcccc
Q 000689 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL----RQQIGLVSQEPALFAT 518 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~ 518 (1350)
+.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999988877 7899999999999975
Q ss_pred -cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCC
Q 000689 519 -TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATS 595 (1350)
Q Consensus 519 -ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts 595 (1350)
||+|||.++... .+.++..+ .+.+.+..+ |++...++.+.+|||||||||+|||||+.+|+|||||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999987432 12222211 112233333 66666778888999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000689 596 ALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 596 ~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~y~~l~ 664 (1350)
+||+.+.+.+++.+.++. .++|+|+|||+++.+. .||+|++|++|++++.|++++++.++.+.....++
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~~ 230 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVEEFI 230 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHHHHh
Confidence 999999999999998874 3899999999999875 49999999999999999999998765344444443
No 181
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-42 Score=401.95 Aligned_cols=218 Identities=33% Similarity=0.574 Sum_probs=191.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 6999999999963 3699999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||+|++.||.. |++||+.|+.. ..+ ++++.++++..++.++..+. ...||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 34566777777776655443 3579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|+|||||||||+||+.+...+++.|+++.+ |+|+|+|||+++.+.. ||||+||++|+|++.|+|+++.++ |
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~-p 228 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ-P 228 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998754 8999999999999855 999999999999999999999876 5
Q ss_pred CchhH
Q 000689 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|.
T Consensus 229 ~~~~~ 233 (351)
T PRK11432 229 ASRFM 233 (351)
T ss_pred CchHH
Confidence 55443
No 182
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-42 Score=400.37 Aligned_cols=219 Identities=30% Similarity=0.542 Sum_probs=192.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|+. +.++|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++..++.. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999952 23699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||||++.+|. .|++|||.++.. ..+ .+++.++++..++.++..+.| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998742 122 234667788888877766554 479999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|+|||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+ |
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~-p 226 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK-P 226 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC-C
Confidence 99999999999999999999999999999998653 7999999999998865 999999999999999999999886 5
Q ss_pred CchhH
Q 000689 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|.
T Consensus 227 ~~~~~ 231 (356)
T PRK11650 227 ASTFV 231 (356)
T ss_pred ccHHH
Confidence 55554
No 183
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-42 Score=389.94 Aligned_cols=221 Identities=33% Similarity=0.527 Sum_probs=187.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 58999999999742223599999999999999999999999999999999999999999999999999887887888999
Q ss_pred EEEccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|||+|+|. ++..||+|||.++... .+.++..+. +.+.+..+ |++........+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKER-----VNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 5567999999987432 222222111 12223333 5555556667899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999999998853 8999999999999877999999999999999999988754
No 184
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-42 Score=401.04 Aligned_cols=223 Identities=34% Similarity=0.569 Sum_probs=188.4
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR 1158 (1350)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997311 346999999999999999999999999999999999999999999999999998877654 47
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++|+||||+|.+|. .|++||+.++.. ..+. +++.+.++..++.++. .....+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKA-----------DRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 89999999999886 699999986521 1222 2344555555554433 3344679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+++|+||||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 8999999999999876 99999999999999999999987
Q ss_pred cCCCchhHH
Q 000689 1309 NNPDGCYAR 1317 (1350)
Q Consensus 1309 ~~~~g~y~~ 1317 (1350)
. +...+.+
T Consensus 231 ~-~~~~~~~ 238 (343)
T PRK11153 231 H-PKHPLTR 238 (343)
T ss_pred C-CCcHHHH
Confidence 6 3333433
No 185
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-42 Score=391.52 Aligned_cols=221 Identities=28% Similarity=0.495 Sum_probs=185.8
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----CCHH
Q 000689 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----LKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~~~~ 500 (1350)
+|+++||+|+|+... .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ....
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 489999999997321 1359999999999999999999999999999999999999999999999999863 3356
Q ss_pred HHhccEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHH
Q 000689 501 WLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri 575 (1350)
.+|+.+|||+|+| .+|..|+.||+.|+... .+.++..+. +.+.+..+ |+. ......+.+||||||||+
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrv 153 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKI-----AAEKLEMV--GLADEFWEKSPFELSGGQMRRV 153 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhccCCcccCCHHHHHHH
Confidence 6888999999998 78889999999987432 222222211 12233333 443 345677889999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHh
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 154 aiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 154 AIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999999999999998875 4899999999999885 599999999999999999999875
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 234 ~ 234 (288)
T PRK13643 234 E 234 (288)
T ss_pred C
Confidence 3
No 186
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=382.92 Aligned_cols=218 Identities=29% Similarity=0.494 Sum_probs=186.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCcEEEECCeeCCCCCHHHHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD---PTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
.|+++|+++.|++ .++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|+++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999974 359999999999999999999999999999999999985 6999999999999888777888
Q ss_pred ccEEEEccCCCcccccHHHHhhcCCCCC----C----HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHH
Q 000689 504 QQIGLVSQEPALFATTIKENILLGRPDA----D----LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~ti~eNi~~g~~~~----~----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
++++|+||++.+|+.|++||+.++.... . .+++.++++..++.++ +.+...+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEE-------VKDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChh-------hhHHhcCCcccCCHHHHHHH
Confidence 8999999999999999999998763210 0 1112222232222221 12345667889999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988779999999999998865 999999999999999999998764
No 187
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-42 Score=391.80 Aligned_cols=218 Identities=29% Similarity=0.532 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC--HHHhh
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--LKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~--l~~lR 1158 (1350)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cccEEEccCC--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1159 RHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++|+||||+| .+|..|++|||.++.. ..++++ +.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987532 234333 44555555553 01223445578999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+|||||+.+|+||||||||++||+.+...+.+.|+++.+ |+|||+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 899999999999985 59999999999999999999987
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
+.
T Consensus 234 ~~ 235 (287)
T PRK13637 234 KE 235 (287)
T ss_pred hC
Confidence 53
No 188
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.1e-42 Score=380.94 Aligned_cols=213 Identities=36% Similarity=0.594 Sum_probs=178.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC-----CCCCcEEEECCeeCCCCC--HH
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY-----DPTSGQVLLDGHDIKSLK--LR 500 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~i~g~~~~~~~--~~ 500 (1350)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999987766 55
Q ss_pred HHhccEEEEccCCCcccccHHHHhhcCCCCC---CHHHHHHHHHHhchHHHHhcCCCCccchhcCC--CCCCChHHHHHH
Q 000689 501 WLRQQIGLVSQEPALFATTIKENILLGRPDA---DLNEIEEAARVANAYSFIIKLPDGFDTQVRER--GVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~--g~~LSgGqkqri 575 (1350)
.+|++++|++|++.+|..|++||+.++.... ..++..+ .+.+.+..+ |++...... +.+||||||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 150 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDE-----RVEEALRKA--ALWDEVKDRLHALGLSGGQQQRL 150 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHc--CCChHHhccCCcccCCHHHHHHH
Confidence 6788999999999999779999998763211 1111111 112223333 444334444 579999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
+|||||+.+|++|||||||++||+.+++.+.+.|+++.+.+|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 151 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 151 CLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 9999999999999999999999999999999999988655899999999999865 99999999999999998765
No 189
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-42 Score=388.74 Aligned_cols=213 Identities=32% Similarity=0.536 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999632 3699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCC--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+||||+| .+|..|++||+.++.. ..+ ++++.++++..++.++..+.| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6788999999987532 122 245677777888876655544 47999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHh
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|||+++|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+. .||||++|++|++++.|+++++.
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 99999999999999999999999999999999874 4899999999999985 49999999999999999997653
No 190
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.5e-42 Score=400.05 Aligned_cols=217 Identities=29% Similarity=0.513 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3689999999999999999999999999999999999999999999999999887664 6789
Q ss_pred EEEccCCccCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||+|++.+|. .|++||+.|+... .+ ++.+.++++..++.++.. ....+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-----------KYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-----------CChhhCCHHHHHHHHHHH
Confidence 99999999996 6999999986421 22 234555666666555443 445689999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||..+.+.+.+.|++..+ |.|+|+|||+++.+.. ||||++|++|+|++.|+|+++.++ |
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~-p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH-P 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998653 7999999999999865 999999999999999999999986 5
Q ss_pred Cchh
Q 000689 1312 DGCY 1315 (1350)
Q Consensus 1312 ~g~y 1315 (1350)
...|
T Consensus 227 ~~~~ 230 (353)
T TIGR03265 227 ATPF 230 (353)
T ss_pred CCHH
Confidence 6555
No 191
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=388.91 Aligned_cols=220 Identities=31% Similarity=0.541 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--HHHHh
Q 000689 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK--LRWLR 503 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~--~~~~r 503 (1350)
|+++||+|+|+... .+++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 89999999997421 136999999999999999999999999999999999999999999999999997654 35678
Q ss_pred ccEEEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCcc--chhcCCCCCCChHHHHHHHH
Q 000689 504 QQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD--TQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~--t~~~~~g~~LSgGqkqri~i 577 (1350)
++||||||+| .+|+.|++|||.++.. ..+.++..+.+ .+.+..+ |+. +.....+.+||||||||++|
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~i 155 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRV-----KRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAI 155 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHH-----HHHHHHc--CCCchhhccCCcccCCHHHHHHHHH
Confidence 8999999998 5788899999998632 22333332221 2223333 443 45677788999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+. .||+|++|++|++++.|+.+++.+.
T Consensus 156 AraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 235 (287)
T PRK13637 156 AGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFKE 235 (287)
T ss_pred HHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999998853 899999999999985 5999999999999999999988653
No 192
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-41 Score=398.93 Aligned_cols=219 Identities=33% Similarity=0.530 Sum_probs=186.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.++. ++.
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ 87 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRH 87 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCC
Confidence 46999999999963 3589999999999999999999999999999999999999999999999999876654 468
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
||||+|++.||+. ||+|||.|+... .+..+..+. +.+.+..+ |++......+.+|||||||||+|||||+
T Consensus 88 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~ 160 (375)
T PRK09452 88 VNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPR-----VMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVV 160 (375)
T ss_pred EEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHH-----HHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999965 999999997531 122222111 11222222 5555566677899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.++.
T Consensus 161 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 161 NKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999998753 8999999999999765 99999999999999999999988753
No 193
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=9.5e-42 Score=381.88 Aligned_cols=222 Identities=33% Similarity=0.516 Sum_probs=187.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-HhccE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~i 506 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 35999999999999999999999999999999999999999999999999998877654 35679
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCCCHHHH-------HHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDADLNEI-------EEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~-------~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
+||+|++.+|.. |++||+.++........+ ........+.+.+..+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999886 999999886432110000 0011112234555555 777777888899999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999998875 68999999999999876 999999999999999999988643
No 194
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.7e-42 Score=398.63 Aligned_cols=207 Identities=31% Similarity=0.523 Sum_probs=182.3
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh----hcccEEEccCCccCc-
Q 000689 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RRHMAIVPQEPCLFA- 1172 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l----R~~i~~VpQdp~LF~- 1172 (1350)
.++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.|+..++...+ |++++||||++.||+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 368999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000689 1173 STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLD 1246 (1350)
Q Consensus 1173 gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLD 1246 (1350)
.|++|||.++.. ..+ .+++.++++.+++.++.... ..+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~-----------p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRY-----------PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCC-----------hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 112 34566777777776665444 4579999999999999999999999999
Q ss_pred CcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhhcCCCchhH
Q 000689 1247 EATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKNNPDGCYA 1316 (1350)
Q Consensus 1247 EaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~ 1316 (1350)
||||+||+.+.+.+++.+.+.. .|+|+|+|||+++.+. .||||++|++|++++.|+|++++++ +...|.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~-p~~~~~ 226 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN-PANEYV 226 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC-cccHHH
Confidence 9999999999999999999864 3899999999999875 4999999999999999999999976 444443
No 195
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=383.13 Aligned_cols=224 Identities=29% Similarity=0.491 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3699999999999999999999999999999999999997 48999999999853 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCC---CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES---AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~---~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|++|||.++... .+ ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999875311 11 33456666666664333 223444 4567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhcCCCchhH
Q 000689 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
.+. +.-.|.
T Consensus 237 ~~~-~~~~~~ 245 (254)
T PRK14273 237 FFN-PKNTKT 245 (254)
T ss_pred HhC-CCChHH
Confidence 865 344443
No 196
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-41 Score=378.58 Aligned_cols=216 Identities=35% Similarity=0.580 Sum_probs=186.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999877777888899
Q ss_pred EEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+.|++||+.++.......+ . .+.+.+..+ |++ ......+.+||||||||++||||++.+|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-~------~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-V------DVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-H------HHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999987643211110 1 122333333 443 3456678899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999875 38999999999999875 999999999999999999999865
No 197
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=384.37 Aligned_cols=218 Identities=31% Similarity=0.535 Sum_probs=188.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4999999999963 369999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--C-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--S-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||++.+|..|++||+.++.. . ..++++.++++.+++.+.+.. .......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHH
Confidence 678899999999999999999999986421 1 123456667777777554322 23455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 865
No 198
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-41 Score=389.73 Aligned_cols=216 Identities=25% Similarity=0.506 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----CCHHH
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----YNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~----~~l~~ 1156 (1350)
|+|+||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997431 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcccEEEccCC--ccCcccHHHHhccCCCC--CCHHH----HHHHHHHhccH-HHHhcCCCCccccccCCCCCCChhHH
Q 000689 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHES--ATESE----IIEAARLANAD-KFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~~--~td~e----i~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
+|++++||+|+| .+|..|+.||+.++... .+.++ +.++++..++. ++ ......+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF-----------WEKSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh-----------ccCCcccCCHHHH
Confidence 899999999998 78999999999876321 23332 44445555552 22 2344568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|||+|||+++.+. .||||++|++|+++++|++++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998865 4899999999999885 599999999999999999999
Q ss_pred Hhhc
Q 000689 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 199
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-41 Score=381.71 Aligned_cols=222 Identities=31% Similarity=0.543 Sum_probs=189.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCCC--CHH
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRKY--NLK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~iDG~di~~~--~l~ 1155 (1350)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGEK---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECCe---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 7899999999643 5999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HhhcccEEEccCCccCcccHHHHhccCCC--C-CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE--S-AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++||||++.+|..|++||+.++.. . .+ ++++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77899999999999999999999986421 1 12 234566666777653331 1233445689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 9999999999999999999998
Q ss_pred hcCCCchh
Q 000689 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.. +...+
T Consensus 232 ~~-~~~~~ 238 (247)
T TIGR00972 232 TN-PKEKR 238 (247)
T ss_pred hC-CCChH
Confidence 65 34444
No 200
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.6e-42 Score=382.66 Aligned_cols=217 Identities=28% Similarity=0.516 Sum_probs=184.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh-hccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l-R~~i 1161 (1350)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 369999999999999999999999999999999999999999999999999988876554 5779
Q ss_pred EEEccCCccCcc-cHHHHhccCCCCCC------------HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHESAT------------ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~t------------d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+||||+|.+|.+ |++||+.++..... .++. ...++++++.+ |++.........|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREA-----RERAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHH-----HHHHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999999986 99999987532110 1111 11223444443 4554555666789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999999999999865 68999999999999966 999999999999999999998
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 231 ~~~ 233 (236)
T cd03219 231 RNN 233 (236)
T ss_pred ccC
Confidence 754
No 201
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=390.63 Aligned_cols=220 Identities=27% Similarity=0.513 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----CHHH
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~----~l~~ 1156 (1350)
|+++||+++|+..+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999997432 23699999999999999999999999999999999999999999999999999653 3467
Q ss_pred hhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHHHHHHHHHhccHHHHhcCCCCccc-cccCCCCCCChhHHHHHH
Q 000689 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKT-FVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQrQrla 1231 (1350)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888899999987632 2343333221 12333333 5553 334567789999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+. .||||++|++|+|++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999985 599999999999999999999876
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 5
No 202
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.7e-41 Score=397.30 Aligned_cols=219 Identities=29% Similarity=0.468 Sum_probs=188.5
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC--cEEEECCeeCCCCCHHHH
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS--GQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~i~g~~~~~~~~~~~ 502 (1350)
.|.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++.+.+. .
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~ 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--H 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--H
Confidence 467999999999974 359999999999999999999999999999999999999999 999999999977655 3
Q ss_pred hccEEEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
++.||||+|++.+|.. ||+|||.|+... .+.++..+ .+.+.++.+ |++........+||||||||++|||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5689999999999966 999999987431 22222221 122333333 6666677788899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC---CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI---GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||+.+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~p 230 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDAP 230 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999988753 7899999999999865 9999999999999999999998764
No 203
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=383.36 Aligned_cols=220 Identities=28% Similarity=0.526 Sum_probs=190.5
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--C
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--Y 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~ 1152 (1350)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 467999999999964 369999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHhhcccEEEccCCccCcccHHHHhccCCC---CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChh
Q 000689 1153 NLKSLRRHMAIVPQEPCLFASTIYENIAYGHE---SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
+...+|++++|+||+|.+|..|+++|+.++.. ..+ +++++++++..++.+.+. ....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHH
Confidence 56778999999999999999999999986532 122 234666777776643322 2344556789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChh
Q 000689 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~ 1304 (1350)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000689 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99865
No 204
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=386.59 Aligned_cols=217 Identities=29% Similarity=0.480 Sum_probs=190.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEccCC--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+|+||+| .++..|+.|||.++.. ..++++ +.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4778899999986522 233333 4566677777665443 3457999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998753 8999999999999988999999999999999999999865
No 205
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=381.76 Aligned_cols=212 Identities=35% Similarity=0.551 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---HHHhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN---LKSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~---l~~lR~ 1159 (1350)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999641 36999999999999999999999999999999999999999999999999998876 567888
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+++|+||++.+|. .|++||+.++... ..++++.++++..++.+ .....+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 9999999998886 6999999864311 11223444555555443 33445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-hcCEEEEEeCCeEEEec
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~G 1301 (1350)
|||||++|||||+++|+||||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3899999999999998 49999999999999999
Q ss_pred ChhHHh
Q 000689 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 999874
No 206
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.1e-41 Score=396.22 Aligned_cols=217 Identities=33% Similarity=0.519 Sum_probs=185.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 4899999999974 359999999999999999999999999999999999999999999999999977654 45689
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC------CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD------ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|||+|++.+|+. |++|||.|+... .+.++..+ .+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999975 999999997431 12222211 112333333 5555566778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||+.+|++||||||||+||+.++..+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|+|++.|+++++..++
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~p 228 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWREP 228 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 99999999999999999999999999999998753 7899999999999865 9999999999999999999998764
No 207
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=380.79 Aligned_cols=211 Identities=30% Similarity=0.532 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999964 369999999999999999999999999999999999999999999999999876553 367899
Q ss_pred EEccCCccCc-ccHHHHhccCCCC--C----C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHES--A----T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~----t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
||||+|.+|. .|++||+.++... . + ++++.++++..++.++. .....+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-----------DRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHH
Confidence 9999999886 5999999875321 1 1 12344555555554433 3334679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+++|++|||||||++||+++.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999976
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 5
No 208
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-41 Score=379.45 Aligned_cols=216 Identities=34% Similarity=0.529 Sum_probs=183.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNV 76 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccce
Confidence 3899999999974 369999999999999999999999999999999999999999999999999876543 25689
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
+||+|+|.+|. .|++||+.++.... +..+.. ..+.+.+..+ |++........+||||||||++|||
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~ 149 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALAR 149 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 99999999886 59999999864211 111111 1123344444 5666667778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||+.+|++|||||||++||+++.+.+.+.|.++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 150 ALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 7999999999998765 999999999999999999998764
No 209
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=388.05 Aligned_cols=220 Identities=32% Similarity=0.563 Sum_probs=188.0
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHH
Q 000689 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~ 501 (1350)
|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996422 23699999999999999999999999999999999999999999999999998653 3456
Q ss_pred HhccEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc-hhcCCCCCCChHHHHHHH
Q 000689 502 LRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT-QVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSgGqkqri~ 576 (1350)
+|++||||||+| .+|..|+.|||.++... .+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999997 68888999999987422 233333221 23445554 7763 556788999999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHh
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+. .||+|++|++|+|++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4899999999999986 599999999999999999998876
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 210
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=387.01 Aligned_cols=216 Identities=30% Similarity=0.546 Sum_probs=191.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
-|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999643 24699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEccCC--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+|+||+| .++..|++|||.++.. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 4677899999987532 1232 34666777777777666554 47999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+.+|+||||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998763 8999999999999988999999999999999999998754
No 211
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2e-41 Score=399.86 Aligned_cols=222 Identities=24% Similarity=0.484 Sum_probs=196.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++..++...+|++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCcc-CcccHHHHhccCCCC----------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1162 AIVPQEPCL-FASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~L-F~gTIreNL~~~~~~----------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||||++.+ |+.|++||+.++... .+.+.+.++++..++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 678999999876421 123457788888888776543 2357999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
+|||||+++|+||||||||++||+.+...+++.|+++. +|+|+|+++|+++.+. .||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 5889999999999995 499999999999999999999985
Q ss_pred cCCCchhHHHHH
Q 000689 1309 NNPDGCYARMIQ 1320 (1350)
Q Consensus 1309 ~~~~g~y~~l~~ 1320 (1350)
. ....+++.
T Consensus 229 ~---~~l~~~~~ 237 (402)
T PRK09536 229 A---DTLRAAFD 237 (402)
T ss_pred c---HHHHHHhC
Confidence 4 34555553
No 212
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=381.20 Aligned_cols=220 Identities=30% Similarity=0.504 Sum_probs=184.8
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 36999999999963 3599999999999999999999999999999999999997 48999999998853 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD---ADL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|++++||+|++.+|+.|++|||.++... ... +.+.++++..++.+. +.......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE-------VKDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh-------hHHHHhCCcccCCHHH
Confidence 45678899999999999989999999986421 111 122233333332211 1223455678999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999999
Q ss_pred HHhcc
Q 000689 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+..++
T Consensus 236 ~~~~~ 240 (254)
T PRK14273 236 LFFNP 240 (254)
T ss_pred HHhCC
Confidence 98653
No 213
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-41 Score=376.11 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=181.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999987643 66788999
Q ss_pred EEccCCccC-cccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLF-ASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF-~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
||||+|.+| ..|+++|+.++.. ..+. +++.++++..++.+.. + ....+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------N----KRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------h----ChhhhCCHHHHHHHHHHHH
Confidence 999999988 5799999976421 1122 3345555555554433 2 2335799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999998778999999999999865 999999999999999999875
No 214
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-41 Score=380.55 Aligned_cols=220 Identities=31% Similarity=0.549 Sum_probs=186.9
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
.+.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 467999999999973 359999999999999999999999999999999999986 589999999999853 4
Q ss_pred CHHHHhccEEEEccCCCcccccHHHHhhcCCC---CCCHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChH
Q 000689 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRP---DADLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGG 570 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~---~~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 570 (1350)
+...+|++|+|++|++.+|+.|++||+.++.. ..+.++ +.++++..++ +.++.+..++...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAAL-------WNEVKDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCC-------ChhhHHHHhcCCCCCCHH
Confidence 55678889999999999999999999987632 122222 2223333222 112234567788899999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+.+|+||||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000689 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 98765
No 215
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.6e-41 Score=379.43 Aligned_cols=218 Identities=32% Similarity=0.541 Sum_probs=184.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~~--~~ 499 (1350)
+|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 3789999999974 35999999999999999999999999999999999999998 99999999998753 45
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC---CCHHHHHHHHHHhchHHHHhcCCCCcc----chhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFD----TQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~----t~~~~~g~~LSgGqk 572 (1350)
..+|+.++|+||++.+|+.|++||+.++... .+.++..+. +.+.+..+ |+. ......+.+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEI-----VEESLKKA--ALWDEVKDRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHc--CCCcchhhHhhCCcccCCHHHH
Confidence 5678899999999999999999999875321 112221111 12223333 443 456677889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 764
No 216
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-41 Score=384.74 Aligned_cols=216 Identities=31% Similarity=0.546 Sum_probs=183.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++|+|+. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+..+++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999963 23599999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|||+|+| .++..|++||+.++.. ..+.++..+. +.+.+..+ |+.........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERR-----VEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 5788899999998632 1222221111 12222222 4444455566789999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHH
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l 651 (1350)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999999875 4899999999999985 5999999999999999998654
No 217
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=396.02 Aligned_cols=217 Identities=28% Similarity=0.518 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|++||.++...+. .|++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999964 369999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEccCCccCc-ccHHHHhccCCC------CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHE------SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~------~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+||+|++.+|. .|++||+.++.. ..+ ++++.++++..++.++..+. ...||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----------PAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHH
Confidence 99999999997 499999998632 112 23455666666665554433 357999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+|||||+++|++||||||||+||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||||++|++|+|++.|++++++
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998753 7899999999999766 9999999999999999999998
Q ss_pred hcCCCchh
Q 000689 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.+ |...|
T Consensus 226 ~~-p~~~~ 232 (353)
T PRK10851 226 RE-PATRF 232 (353)
T ss_pred hC-ccchH
Confidence 76 55444
No 218
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=381.21 Aligned_cols=218 Identities=31% Similarity=0.551 Sum_probs=184.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 359999999999999999999999999999999999975 689999999999864 345
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+|++++|++|++.+|+.|++||+.++... . .. +++.++++..++.+. +.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHH
Confidence 5778899999999999989999999876311 1 11 122333333333221 12345677889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 765
No 219
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.5e-41 Score=380.17 Aligned_cols=212 Identities=31% Similarity=0.521 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~lR~ 1159 (1350)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2369999999999999999999999999999999999999999999999999987654 45788
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+++||||++.+|. .|++||+.++... ..++++.++++..++.++ ......+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 9999999998886 6999999865321 112234455555555433 3344568999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999874 37999999999999865 9999999999999999
Q ss_pred ChhHHh
Q 000689 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999873
No 220
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=382.42 Aligned_cols=218 Identities=29% Similarity=0.453 Sum_probs=186.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC--CCCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR--KYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~--~~~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3699999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHhhcccEEEccCCccCcc-cHHHHhccCCC--C--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChh
Q 000689 1155 KSLRRHMAIVPQEPCLFAS-TIYENIAYGHE--S--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
..+|++++|+||+|.+|.+ |++||+.++.. . .. ++++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 11 234556666666543332 1234456789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChh
Q 000689 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~ 1304 (1350)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000689 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++++.
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 99865
No 221
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=387.44 Aligned_cols=220 Identities=32% Similarity=0.551 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----CCHHH
Q 000689 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----LKLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~~~~~ 501 (1350)
|+++|++|+|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++.. .....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 89999999996421 1469999999999999999999999999999999999999999999999999863 34556
Q ss_pred HhccEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHHH
Q 000689 502 LRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri~ 576 (1350)
+|+.||||+|+| .+|+.|++|||.|+... .+.++..+. +.+.+..+ |++ ......+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 68888999999987432 233332221 12333333 554 3346677899999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||+.+|++|||||||++||+.+...+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999999885 38999999999999865 99999999999999999998875
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 4
No 222
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=383.15 Aligned_cols=220 Identities=30% Similarity=0.503 Sum_probs=190.1
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--C
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--Y 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~ 1152 (1350)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|++||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 3699999999999999999999999999999999999975 89999999999865 3
Q ss_pred CHHHhhcccEEEccCCccCcccHHHHhccCCC--CC--C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1153 NLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA--T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~--t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+...+|++++|+||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ......+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 56678899999999999998999999986421 11 1 234566777777754432 123445678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecCh
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+++++|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778899999999999965 899999999999999999
Q ss_pred hHHhhc
Q 000689 1304 SHLLKN 1309 (1350)
Q Consensus 1304 ~eLl~~ 1309 (1350)
++++..
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 999865
No 223
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.2e-41 Score=375.42 Aligned_cols=217 Identities=26% Similarity=0.421 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh-hccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l-R~~i 1161 (1350)
|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999964 369999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
+|+||++.+|.+ |++||+.++.......+..+.+ .++++.++ +++........+||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999998764322111111111 11122111 1222334455679999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
++|||||||++||+++...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 58999999999999866 99999999999999999988763
No 224
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-41 Score=385.90 Aligned_cols=219 Identities=35% Similarity=0.552 Sum_probs=185.7
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh----hc
Q 000689 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RR 1159 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l----R~ 1159 (1350)
.++||+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45677777753 368999999999999999999999999999999999999999999999999988765543 46
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~--~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+++|+||+|.+|. .|++||+.++.. .. .++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 8999999999885 699999986421 11 1234666777777766655544 4799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||||+++|+||||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999874 37999999999999865 999999999999999999999875
Q ss_pred CCCchhHH
Q 000689 1310 NPDGCYAR 1317 (1350)
Q Consensus 1310 ~~~g~y~~ 1317 (1350)
+...|.+
T Consensus 252 -~~~~~~~ 258 (269)
T cd03294 252 -PANDYVR 258 (269)
T ss_pred -cCcHHHH
Confidence 3444543
No 225
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.3e-41 Score=375.25 Aligned_cols=203 Identities=31% Similarity=0.561 Sum_probs=175.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---Hhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR~ 1159 (1350)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23699999999999999999999999999999999999999999999999999776543 4788
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCC------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+++|+||+|.+|. .|++||+.++.. ...++++.++++..++.++....| .+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 599999986421 112345677777777766554433 4799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeE
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrI 1297 (1350)
||||+++|+||||||||++||+++.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 48999999999999975 999999999985
No 226
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.2e-41 Score=396.33 Aligned_cols=218 Identities=31% Similarity=0.548 Sum_probs=189.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc--cEEEECCccCCCCCHHHhh
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS--GRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~--G~I~iDG~di~~~~l~~lR 1158 (1350)
|.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++...+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999964 369999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cccEEEccCCccCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1159 RHMAIVPQEPCLFAS-TIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++|+||+|++.||.. |++|||.++.. ..+. +.+.++++..++.++..+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999965 99999987632 1232 34556666666666554443 579999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC---CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS---GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~---g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|||||+++|++||||||||+||+.+...+.+.|++..+ |.|+|+|||+++.+.. ||||+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988653 7899999999999865 9999999999999999999999
Q ss_pred hcCCCchh
Q 000689 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.+ |...|
T Consensus 228 ~~-p~~~~ 234 (362)
T TIGR03258 228 DA-PADGF 234 (362)
T ss_pred hC-cCcHH
Confidence 76 55555
No 227
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.6e-41 Score=389.16 Aligned_cols=231 Identities=29% Similarity=0.456 Sum_probs=190.4
Q ss_pred eEEEEEEEEECCCCC----------CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC
Q 000689 427 LIELKHVDFSYPSRP----------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS 496 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~----------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~ 496 (1350)
.|+++|++++|+.+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 699999999996321 2469999999999999999999999999999999999999999999999999988
Q ss_pred CCHH---HHhccEEEEccCC--Cccc-ccHHHHhhcCC----CCCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCC
Q 000689 497 LKLR---WLRQQIGLVSQEP--ALFA-TTIKENILLGR----PDADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGV 565 (1350)
Q Consensus 497 ~~~~---~~r~~i~~v~Q~~--~lf~-~ti~eNi~~g~----~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~ 565 (1350)
++.. .+|++|+||+|+| .|++ .||.|||.++. +..+.++..+.+ .+.+..+ |++ ......+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCcc
Confidence 8754 3677899999998 4774 69999997642 122333332222 2233333 442 34567788
Q ss_pred CCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 566 ~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i 642 (1350)
+|||||||||+|||||+.+|++||+||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998853 8999999999999976 999999999999
Q ss_pred EEecChHHHHhccCCcHHHHHH
Q 000689 643 SEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 643 ~~~g~~~~l~~~~~~~~y~~l~ 664 (1350)
++.|+.++++.++.+.+.+.++
T Consensus 241 ve~g~~~~i~~~~~~py~~~l~ 262 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTKALM 262 (331)
T ss_pred EEEcCHHHHHcCCCCHHHHHHH
Confidence 9999999998764333333344
No 228
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-40 Score=376.61 Aligned_cols=220 Identities=26% Similarity=0.462 Sum_probs=196.5
Q ss_pred CCCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhh
Q 000689 1079 LRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1079 ~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR 1158 (1350)
..+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------ 98 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------ 98 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC------------
Confidence 34579999999952 3699999999999999999999999999999999999999999999998
Q ss_pred cccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1159 RHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
+++|+||++.+|.+|++||+.++.. ..+.++.++++.+++.+.+..+|.++++.+++.+.+||||||||++|||||++
T Consensus 99 -~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~ 176 (282)
T cd03291 99 -RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYK 176 (282)
T ss_pred -EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999987643 34445667778889999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHH-HHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhcCCCchhHH
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEA-LDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYAR 1317 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~-L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~ 1317 (1350)
+|+||||||||++||+++...+.+. +++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+. ...|..
T Consensus 177 ~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~ 254 (282)
T cd03291 177 DADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL--RPDFSS 254 (282)
T ss_pred CCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc--chHHHH
Confidence 9999999999999999999988875 4555668999999999999988999999999999999999999865 345654
Q ss_pred HH
Q 000689 1318 MI 1319 (1350)
Q Consensus 1318 l~ 1319 (1350)
.+
T Consensus 255 ~~ 256 (282)
T cd03291 255 KL 256 (282)
T ss_pred HH
Confidence 44
No 229
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=365.17 Aligned_cols=233 Identities=35% Similarity=0.523 Sum_probs=194.2
Q ss_pred eEEEEEEEEECCCCCC---------------------CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000689 427 LIELKHVDFSYPSRPE---------------------VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|-||||||||+++|.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 4889999998875421 1237899999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHHh----ccEEEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc
Q 000689 486 QVLLDGHDIKSLKLRWLR----QQIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~r----~~i~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t 558 (1350)
+|+++|.|+..++.+.|| +++++|||+..||+- ||.||..||..- ...+|-++ .+.+.++.. |++.
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~-----~a~~~l~~V--gL~~ 156 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREE-----RALEALELV--GLEG 156 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHH-----HHHHHHHHc--Cchh
Confidence 999999999999987654 579999999999865 999999999752 22222211 122333333 5555
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEE
Q 000689 559 QVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIR-KADVVA 635 (1350)
Q Consensus 559 ~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~-~~d~i~ 635 (1350)
.-...+.+||||+||||.|||||..||+||++|||+|||||--+..+|+.|.++. -+||+|+|||+|++.- -.|||.
T Consensus 157 ~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 157 YADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred hhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEE
Confidence 5566678999999999999999999999999999999999999999999998775 3799999999999875 599999
Q ss_pred EEeCCEEEEecChHHHHhccCCcHHHHHHHH
Q 000689 636 VLQQGSVSEIGTHDELIAKGENGVYAKLIRM 666 (1350)
Q Consensus 636 vl~~G~i~~~g~~~~l~~~~~~~~y~~l~~~ 666 (1350)
.|++|+|+..||++|++.++.+.+-+.+++.
T Consensus 237 imkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~~ 267 (386)
T COG4175 237 IMKDGEIVQVGTPEEILLNPANDYVRDFVRN 267 (386)
T ss_pred EecCCeEEEeCCHHHHHcCccHHHHHHHHhc
Confidence 9999999999999999998766555666543
No 230
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=377.72 Aligned_cols=218 Identities=34% Similarity=0.594 Sum_probs=186.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
++++||+++|++. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 35999999999999999999999999999999999999999999999999998877777888999
Q ss_pred EEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc--hhcCCCCCCChHHHHHHHHHHHhc
Q 000689 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT--QVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t--~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|++|++.+|. .|++||+.++... .+.++. ...+.+.+..+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 5999999875321 111111 11223444444 5553 566778899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999875 38999999999998765 999999999999999999988754
No 231
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.4e-41 Score=395.17 Aligned_cols=217 Identities=37% Similarity=0.633 Sum_probs=191.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.++++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+.. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999964 3699999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||+|++.||.. |++|||.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999998642 122 234667777778877766655 579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||..+...+.+.|++..+ |.|+|+|||++..+.. ||||++|++|+|++.|++++++.+ |
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~-p 236 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE-P 236 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998753 8999999999999755 999999999999999999999987 5
Q ss_pred Cchh
Q 000689 1312 DGCY 1315 (1350)
Q Consensus 1312 ~g~y 1315 (1350)
...|
T Consensus 237 ~~~~ 240 (375)
T PRK09452 237 KNLF 240 (375)
T ss_pred ccHH
Confidence 5544
No 232
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-41 Score=387.35 Aligned_cols=221 Identities=27% Similarity=0.487 Sum_probs=184.9
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--------
Q 000689 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS-------- 496 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~-------- 496 (1350)
.|+++||+|+|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ----------------CCHHHHhccEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCc
Q 000689 497 ----------------LKLRWLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGF 556 (1350)
Q Consensus 497 ----------------~~~~~~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~ 556 (1350)
.+...+|+.||||+|+| .+|..||+|||.|+... .+.++..+. +.+.+..+ |+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL 154 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GL 154 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CC
Confidence 13456788999999986 67888999999987432 233333221 12233333 56
Q ss_pred c-chhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCE
Q 000689 557 D-TQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADV 633 (1350)
Q Consensus 557 ~-t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~ 633 (1350)
+ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+. .||+
T Consensus 155 ~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 155 DESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred ChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 4 45677888999999999999999999999999999999999999999999998875 4899999999999875 5999
Q ss_pred EEEEeCCEEEEecChHHHHhc
Q 000689 634 VAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 634 i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++|++|+|++.|+.+++...
T Consensus 235 v~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 235 TIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEEECCEEEEECCHHHHhcC
Confidence 999999999999999998754
No 233
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=374.08 Aligned_cols=203 Identities=38% Similarity=0.620 Sum_probs=174.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999876543 577899
Q ss_pred EEccCCccCc-ccHHHHhccCCCC--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|. .|++||+.++... .+ ++++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNR-----------YPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhc-----------ChhhCCHHHHHHHHHHHH
Confidence 9999998886 6999999865221 11 2335556666665554433 335799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|+++|++|||||||++||+++.+.+.+.|++.. .|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999864 38999999999999865 9999999999999876
No 234
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=385.78 Aligned_cols=215 Identities=26% Similarity=0.491 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC--CCCHHHhhc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR--KYNLKSLRR 1159 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~--~~~l~~lR~ 1159 (1350)
-|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 345667899
Q ss_pred ccEEEccCC--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1160 HMAIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1160 ~i~~VpQdp--~LF~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
+++|+||+| .+|+.|++||+.++.. ..+. +.+.++++..++.++. .....+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 999999998 5788999999986432 1232 2345556666665443 3445689999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
|||||+.+|+||||||||++||+.+...+.+.|++..+ |+|||++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998753 899999999999997 599999999999999999999876
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 4
No 235
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-41 Score=378.66 Aligned_cols=216 Identities=33% Similarity=0.542 Sum_probs=184.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 36999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+ +......+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999999886 699999976421 112 123344444444331 012344567899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++++|++|||||||++||+.+...+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999999875 38999999999998765 999999999999999999999765
No 236
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-41 Score=376.47 Aligned_cols=216 Identities=33% Similarity=0.548 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---Hhh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR 1158 (1350)
|+++|++++|+.+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
++++|+||+|.+|. .|++||+.++.. ..+ .+++.++++..++.++... ...+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADA-----------YPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhc-----------ChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 112 2345556666666544433 34679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
||||++++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999999875 38999999999999866 99999999999999999998875
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 237
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-41 Score=378.30 Aligned_cols=221 Identities=37% Similarity=0.585 Sum_probs=184.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---HHHHhc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK---LRWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~---~~~~r~ 504 (1350)
++++|++++|++ +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 136999999999999999999999999999999999999999999999999998776 456788
Q ss_pred cEEEEccCCCccc-ccHHHHhhcCCCCCC--HHHH---HHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 505 QIGLVSQEPALFA-TTIKENILLGRPDAD--LNEI---EEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~eNi~~g~~~~~--~~~~---~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
.++||+|++.+|. .|++||+.++..... ...+ ........+.+.+..+ |+.......+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 9999999998886 599999987642110 0000 0000111223344444 566666778889999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999874 38999999999999984 9999999999999999988863
No 238
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-41 Score=387.55 Aligned_cols=217 Identities=28% Similarity=0.488 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----CCHHH
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----YNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~----~~l~~ 1156 (1350)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 1469999999999999999999999999999999999999999999999999863 34667
Q ss_pred hhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++++||||+| .+|..|++|||.++.. ..+.++ +.++++.+++++. .......+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEE----------LLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChh----------hhhCCcccCCHHHHH
Confidence 888999999998 6888999999987632 233333 3444455554321 123445679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+ |.|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 8999999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000689 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 8754
No 239
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.9e-41 Score=377.85 Aligned_cols=221 Identities=35% Similarity=0.569 Sum_probs=183.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r 503 (1350)
+|+++||+++|+. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 1 ~l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR02315 1 MLEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLR 78 (243)
T ss_pred CeEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHH
Confidence 3789999999962 2369999999999999999999999999999999999999999999999999877654 3467
Q ss_pred ccEEEEccCCCccc-ccHHHHhhcCCCCCC--HHHH---HHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 504 QQIGLVSQEPALFA-TTIKENILLGRPDAD--LNEI---EEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~eNi~~g~~~~~--~~~~---~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
++++||+|++.+|. .|++||+.++..... .... ........+.+.+..+ |++......+.+||||||||++|
T Consensus 79 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (243)
T TIGR02315 79 RRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAI 156 (243)
T ss_pred hheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 88999999998886 599999987642110 0000 0000111223344444 66666677888999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||++++|++|++++.|+++++
T Consensus 157 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 157 ARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 999999999999999999999999999999999874 37999999999999865 999999999999999999886
No 240
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.4e-41 Score=366.24 Aligned_cols=200 Identities=36% Similarity=0.563 Sum_probs=182.3
Q ss_pred EEEEEEEEECCCCCC--CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1083 VELKHVDFSYPSRPD--IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~--~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
|+++||+++|++..+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999975311 3699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1161 MAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1161 i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
|+|+||+|.+|++|++||+.++.. .++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 4566778888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHH-HHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCe
Q 000689 1241 EIMLLDEATSALDAESERSVQE-ALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGK 1296 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~-~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~Gr 1296 (1350)
+++||||||++||+++.+.+.+ .+++.. +|+|||++||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566553 4799999999999998899999999985
No 241
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.2e-41 Score=376.23 Aligned_cols=216 Identities=27% Similarity=0.521 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998776544 45899
Q ss_pred EEccCCcc-CcccHHHHhccCCC--CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1163 IVPQEPCL-FASTIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1163 ~VpQdp~L-F~gTIreNL~~~~~--~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
|+||++.+ +..|+++|+.++.. ..+.++..+ .+.+++..+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56799999986431 122222111 122333333 444445556678999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|+||||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 48999999999999988999999999999999999999865
No 242
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-41 Score=386.87 Aligned_cols=216 Identities=25% Similarity=0.455 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC---------
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--------- 1151 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~--------- 1151 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997432 2369999999999999999999999999999999999999999999999887632
Q ss_pred ---------------CCHHHhhcccEEEccCC--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHhccH-HHHhcC
Q 000689 1152 ---------------YNLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATES----EIIEAARLANAD-KFISSL 1207 (1350)
Q Consensus 1152 ---------------~~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~----ei~~al~~a~l~-~~I~~l 1207 (1350)
.+...+|++||||||+| .+|..|++|||.++.. ..+.+ ++.++++..++. ++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 13467889999999987 6888999999987632 23333 345555555553 22
Q ss_pred CCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-h
Q 000689 1208 PDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-N 1285 (1350)
Q Consensus 1208 p~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~ 1285 (1350)
......+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|+|||+|||+++.+. .
T Consensus 159 -------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 -------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 334456899999999999999999999999999999999999999999998864 4899999999999875 4
Q ss_pred cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1286 AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1286 ~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||||++|++|++++.|+++++.+.
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998754
No 243
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-41 Score=379.82 Aligned_cols=226 Identities=28% Similarity=0.441 Sum_probs=191.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCCCHHH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~~l~~ 1156 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3699999999999999999999999999999999999974 6999999999998888888
Q ss_pred hhcccEEEccCCccC-cccHHHHhccCCC--C--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1157 LRRHMAIVPQEPCLF-ASTIYENIAYGHE--S--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF-~gTIreNL~~~~~--~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
+|++|+|+||+|.+| ..|++||+.++.. . .. ++++.++++..++.+.+.. .++ ....+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKD---RLD----APAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhh---hhc----CCcccCCHHHH
Confidence 999999999999755 6799999986431 0 01 2356677777776543321 223 34467999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999999999999999877899999999999986 4999999999999999999999
Q ss_pred hhcCCCchhHHH
Q 000689 1307 LKNNPDGCYARM 1318 (1350)
Q Consensus 1307 l~~~~~g~y~~l 1318 (1350)
.+. +...+.+.
T Consensus 233 ~~~-~~~~~~~~ 243 (250)
T PRK14247 233 FTN-PRHELTEK 243 (250)
T ss_pred HcC-CccHHHHH
Confidence 865 34444443
No 244
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-41 Score=376.04 Aligned_cols=220 Identities=38% Similarity=0.575 Sum_probs=185.9
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HH
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~ 502 (1350)
+|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 378999999997431 12699999999999999999999999999999999999999999999999998776543 34
Q ss_pred hccEEEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
++.++|++|++.+|. .|++||+.++... .+..+. ...+.+.+..+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIAR 153 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 778999999999997 5999999875321 111111 11223445555 6666667778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 154 ALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999999875 3 8999999999999865 99999999999999999988764
No 245
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.4e-41 Score=395.00 Aligned_cols=214 Identities=28% Similarity=0.508 Sum_probs=187.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 5899999999973 4699999999999999999999999999999999999999999999999999998888899999
Q ss_pred EEEccCCCc-ccccHHHHhhcCCCCC-------C---HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHH
Q 000689 507 GLVSQEPAL-FATTIKENILLGRPDA-------D---LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~eNi~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
|||+|++.+ |+.|++||+.+++... . .+.+.++++.. |+.........+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~v-----------gl~~~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERT-----------GVAQFADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHHHHHH
Confidence 999999987 5679999999875311 1 11223333333 444445566789999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+++|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999885 58999999999999965 99999999999999999999875
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 4
No 246
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.3e-41 Score=373.04 Aligned_cols=216 Identities=33% Similarity=0.517 Sum_probs=181.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hccE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~i 506 (1350)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++...+.... ++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999987776544 6789
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|.. |++||+.++.......+..+ +...+.+.+. +++......+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~--~~~~~l~~~~----~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA--RLERVYELFP----RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH--HHHHHHHHHH----hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999886 99999998754221111111 1111222221 2334455677889999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
++|||||||++||+.++..+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998875 58999999999999865 9999999999999999988775
No 247
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-40 Score=365.38 Aligned_cols=203 Identities=37% Similarity=0.586 Sum_probs=180.2
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
+.|+++|++++|+.. ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|++
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 569999999999742 2369999999999999999999999999999999999999999999999999988888888899
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+||+|+|.+|++|++||+.+... .+.+++.++++ +++++.+||||||||++||||++.+|
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 999999999999999999987542 23333322221 34567899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~ 648 (1350)
++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999988778999999999999978999999999999988763
No 248
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.2e-41 Score=390.04 Aligned_cols=226 Identities=27% Similarity=0.403 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCC----------CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC
Q 000689 1082 EVELKHVDFSYPSRP----------DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK 1151 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~----------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~ 1151 (1350)
-|+++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|++||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996421 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HhhcccEEEccCC--ccC-cccHHHHhccCC----CCCCHHHH----HHHHHHhccHHHHhcCCCCccccccC
Q 000689 1152 YNLK---SLRRHMAIVPQEP--CLF-ASTIYENIAYGH----ESATESEI----IEAARLANADKFISSLPDGYKTFVGE 1217 (1350)
Q Consensus 1152 ~~l~---~lR~~i~~VpQdp--~LF-~gTIreNL~~~~----~~~td~ei----~~al~~a~l~~~I~~lp~Gldt~vge 1217 (1350)
++.. .+|++|+||+|+| .|| ..||.+||.++. +..+.++. .++++.+++.+ .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhcC
Confidence 8754 3678999999999 477 479999987431 12343333 34444554421 11234
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeC
Q 000689 1218 RGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDD 1294 (1350)
Q Consensus 1218 ~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~ 1294 (1350)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ |.|+|+|||+++.+.. ||||+||.+
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998753 8999999999999976 999999999
Q ss_pred CeEEEecChhHHhhcCCCchhHHH
Q 000689 1295 GKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1295 GrIvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
|+|+|.|++++++++ +...|.+.
T Consensus 238 G~ive~g~~~~i~~~-~~~py~~~ 260 (331)
T PRK15079 238 GHAVELGTYDEVYHN-PLHPYTKA 260 (331)
T ss_pred CEEEEEcCHHHHHcC-CCCHHHHH
Confidence 999999999999976 55667663
No 249
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-41 Score=393.91 Aligned_cols=219 Identities=31% Similarity=0.527 Sum_probs=187.1
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhc
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQ 504 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~ 504 (1350)
...|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.++ .++
T Consensus 17 ~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r 91 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQR 91 (377)
T ss_pred CceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHC
Confidence 446999999999963 359999999999999999999999999999999999999999999999999987654 467
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
.||||+|++.||+. ||+|||.|+... .+..+..+ .+.+.++.+ |+.........+|||||||||+|||||
T Consensus 92 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL 164 (377)
T PRK11607 92 PINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSL 164 (377)
T ss_pred CEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 89999999999976 999999997431 22222221 112333333 555566677789999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+.+|++||||||||+||+.+++.+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 165 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 165 AKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999998888764 38999999999999765 9999999999999999999998764
No 250
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-41 Score=396.15 Aligned_cols=217 Identities=29% Similarity=0.472 Sum_probs=185.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999876543 4679
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.+|.. |++|||.|+... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999965 999999987431 22222111 122333344 56666667778999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+|++||||||||+||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++...+
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p 225 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 225 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999988743 8999999999998865 9999999999999999999998754
No 251
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-41 Score=379.98 Aligned_cols=221 Identities=30% Similarity=0.509 Sum_probs=185.9
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS-- 496 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~-- 496 (1350)
..+.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 16 ~~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 3457999999999973 3699999999999999999999999999999999999975 89999999999864
Q ss_pred CCHHHHhccEEEEccCCCcccccHHHHhhcCCC--CC--CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCC
Q 000689 497 LKLRWLRQQIGLVSQEPALFATTIKENILLGRP--DA--DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLS 568 (1350)
Q Consensus 497 ~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~--~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LS 568 (1350)
.+...+|+.++||+|++.+|+.|++||+.++.. .. ... ++.++++..++.++ +.+..+..+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEE-------VKDRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCC
Confidence 345667889999999999998899999987531 10 111 12223333222211 1234566788999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988778899999999999965 99999999999999999
Q ss_pred hHHHHhc
Q 000689 648 HDELIAK 654 (1350)
Q Consensus 648 ~~~l~~~ 654 (1350)
++++...
T Consensus 246 ~~~~~~~ 252 (267)
T PRK14235 246 TEKMFTN 252 (267)
T ss_pred HHHHHhC
Confidence 9998754
No 252
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-41 Score=396.26 Aligned_cols=217 Identities=30% Similarity=0.516 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999876653 5689
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||||++.+|.. |++||+.++.. ..+ ++++.++++..++.++..+. ..+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~-----------~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRK-----------PKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999965 99999987632 122 23456667777766554433 3579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||+.+.+.+.+.|++..+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++... |
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~-p 225 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY-P 225 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-c
Confidence 99999999999999999999999999999998653 8899999999998865 999999999999999999999876 4
Q ss_pred Cchh
Q 000689 1312 DGCY 1315 (1350)
Q Consensus 1312 ~g~y 1315 (1350)
...|
T Consensus 226 ~~~~ 229 (369)
T PRK11000 226 ANRF 229 (369)
T ss_pred ccHH
Confidence 5444
No 253
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.3e-41 Score=378.59 Aligned_cols=213 Identities=29% Similarity=0.501 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC---------
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--------- 1153 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~--------- 1153 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999964 36999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHhhcccEEEccCCccCc-ccHHHHhccCCC---CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCC
Q 000689 1154 ----LKSLRRHMAIVPQEPCLFA-STIYENIAYGHE---SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1154 ----l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~---~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
...+|++++|++|++.+|. .|++||+.++.. ... ++++.++++..++.++.. .....
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-----------HMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-----------cChhh
Confidence 2467889999999998885 799999986421 112 233455555555554443 34467
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEE
Q 000689 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVA 1298 (1350)
Q Consensus 1222 LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv 1298 (1350)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ |+|+|+|||+++.+.. ||++++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999865 9999999999999
Q ss_pred EecChhHHhhc
Q 000689 1299 ELGSHSHLLKN 1309 (1350)
Q Consensus 1299 E~Gt~~eLl~~ 1309 (1350)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999865
No 254
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-41 Score=383.53 Aligned_cols=217 Identities=30% Similarity=0.494 Sum_probs=189.8
Q ss_pred cEEEEEEEEECCCCC---CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC-HHHh
Q 000689 1082 EVELKHVDFSYPSRP---DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN-LKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~---~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~-l~~l 1157 (1350)
-|+++|++++|+... +.++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997431 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcccEEEccCCc--cCcccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1158 RRHMAIVPQEPC--LFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R~~i~~VpQdp~--LF~gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 677799999987532 122 345677777778877665543 5799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHh
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
++|||||+++|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 389999999999999889999999999999999999997
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 255
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.5e-41 Score=372.21 Aligned_cols=215 Identities=28% Similarity=0.504 Sum_probs=180.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++||+++|++. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999986543 56678899
Q ss_pred EEccCCCcc-cccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALF-ATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf-~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+| ..|++||+.++.. ....++..+ .+.+.+..+ |+.........+||||||||++|||||+.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 999999988 5699999987421 112211111 122333333 444445566678999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999998778999999999999865 999999999999999998775
No 256
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-41 Score=379.43 Aligned_cols=223 Identities=29% Similarity=0.493 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~--~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
..+|+.++|+||+|.+|..|++||+.++.. ..+. +++.++++.+++.+.+ +.........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 1222 2345566666554321 11223445679999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred hcCCCchh
Q 000689 1308 KNNPDGCY 1315 (1350)
Q Consensus 1308 ~~~~~g~y 1315 (1350)
.. +...|
T Consensus 242 ~~-~~~~~ 248 (258)
T PRK14268 242 HN-PREKS 248 (258)
T ss_pred cC-CCCHH
Confidence 65 34444
No 257
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.9e-41 Score=386.43 Aligned_cols=218 Identities=27% Similarity=0.465 Sum_probs=183.1
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 46999999999963 36999999999999999999999999999999999999999999999999987654 457889
Q ss_pred EEEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 506 IGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
||||||++.++. .|++||+.|... ..+..+..+. +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999886 599999986322 1222222211 12222222 3333344455689999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999885 48999999999999976 999999999999999999998754
No 258
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=380.46 Aligned_cols=222 Identities=28% Similarity=0.491 Sum_probs=188.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCCCC--HH
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRKYN--LK 1155 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~~~--l~ 1155 (1350)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 369999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HhhcccEEEccCCccCcccHHHHhccCC--CC------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1156 SLRRHMAIVPQEPCLFASTIYENIAYGH--ES------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~--~~------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
.+|++++||||+|.+|.+|++||+.++. .+ ..++++.++++..++.+.+ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 6788999999999999999999998642 11 1123455666666664432 1233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhcCCCchh
Q 000689 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
++. +...|
T Consensus 236 ~~~-~~~~~ 243 (251)
T PRK14244 236 FKN-PQSSK 243 (251)
T ss_pred hcC-CCChH
Confidence 876 45544
No 259
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.7e-41 Score=371.69 Aligned_cols=208 Identities=32% Similarity=0.551 Sum_probs=172.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|
T Consensus 1 ~l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (216)
T TIGR00960 1 MIRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLR 79 (216)
T ss_pred CeEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHH
Confidence 37899999999642 23599999999999999999999999999999999999999999999999998766543 467
Q ss_pred ccEEEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 504 QQIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
++++|++|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |+.........+||||||||++||||
T Consensus 80 ~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 80 RHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANE-----RVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred HhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999886 4999999875321 11111111 122333333 45555556667999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 642 (1350)
|+.+|++|||||||++||+++.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+|
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998874 48999999999999875 999999999975
No 260
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-40 Score=372.61 Aligned_cols=217 Identities=31% Similarity=0.514 Sum_probs=186.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.+
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i 76 (236)
T TIGR03864 1 ALEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARL 76 (236)
T ss_pred CEEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhE
Confidence 3789999999963 36999999999999999999999999999999999999999999999999987766544 4589
Q ss_pred EEEccCCCcc-cccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALF-ATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf-~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.++ ..|++||+.++... ...++.. ..+.+.+..+ |++......+.+||||||||++|||||++
T Consensus 77 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~ 149 (236)
T TIGR03864 77 GVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLH 149 (236)
T ss_pred EEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999875 56999999875321 1222111 1233445555 67777778888999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 150 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 150 RPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999999999875 48999999999999988999999999999999999988764
No 261
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=374.57 Aligned_cols=210 Identities=28% Similarity=0.428 Sum_probs=178.8
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---h
Q 000689 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---L 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---l 1157 (1350)
-++++||+++|+.+. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 146999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cccEEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1158 R-RHMAIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R-~~i~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
| ++++|+||+|.+|.. |++||+.++.. ... ++++.++++..++.++ ......+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3 679999999998875 99999976311 112 2234555555554433 334456799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEEEecC
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt 1302 (1350)
++||||++.+|+||||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4899999999999999999999999999998875
No 262
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-41 Score=380.77 Aligned_cols=218 Identities=28% Similarity=0.460 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999865 789999999999865 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC---CC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE---SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|.+|++||+.++.. .. .++.+.++++..++.+.+ .........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHHH
Confidence 577889999999999999999999986421 11 123345555555553221 1223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999998865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 865
No 263
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-41 Score=383.03 Aligned_cols=219 Identities=26% Similarity=0.493 Sum_probs=186.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC--CCCHHHHhc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--SLKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--~~~~~~~r~ 504 (1350)
.|+++|++|+|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 6999999999963 236999999999999999999999999999999999999999999999999984 334567888
Q ss_pred cEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 505 QIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
.+|||+|+| .+|+.|++||+.++... .+.++..+. +.+.++.+ |+.......+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 57788999999875321 222222211 12223333 55556677788999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|+||||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999998853 899999999999987 5999999999999999999998754
No 264
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-41 Score=379.70 Aligned_cols=219 Identities=31% Similarity=0.508 Sum_probs=187.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 36999999999964 369999999999999999999999999999999999987 689999999999863 56
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCCC--C---CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHES--A---TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~---td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
...+|++++||||+|.+|..|++||+.++... . .++++.++++.+++.+.+ +........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCHHHHH
Confidence 67788999999999999989999999875321 1 133455566666654322 22344456789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeC-----------Ce
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDD-----------GK 1296 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~-----------Gr 1296 (1350)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778999999999999865 999999996 67
Q ss_pred EEEecChhHHhhc
Q 000689 1297 VAELGSHSHLLKN 1309 (1350)
Q Consensus 1297 IvE~Gt~~eLl~~ 1309 (1350)
++|.|++++++..
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999865
No 265
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-41 Score=370.53 Aligned_cols=207 Identities=38% Similarity=0.618 Sum_probs=175.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999964 369999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999876321 11111111 123344444 666666777789999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999874 38999999999999865 9999999999998765
No 266
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-41 Score=368.84 Aligned_cols=203 Identities=28% Similarity=0.483 Sum_probs=177.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|+.+ ++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|++++
T Consensus 1 i~~~~~~~~~~~~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGKK---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECCE---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 5799999999643 6999999999999 99999999999999999999999999999999999998776 77899999
Q ss_pred EEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++.. + ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------K----KIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------C----chhhCCHHHHHHHHHHHH
Confidence 99999999876 99999975311 111 234666777777765533 2 235799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998777999999999999965 9999999999999876
No 267
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-41 Score=380.92 Aligned_cols=216 Identities=31% Similarity=0.555 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++++|+.. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCC--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp--~LF~gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+|+||+| .++..|++|||.++.. ..+.++ +.++++..++.++... ...+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDK-----------EPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4567899999987521 123332 4455666666555443 3468999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 5899999999999888999999999999999999998764
No 268
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.3e-41 Score=370.51 Aligned_cols=207 Identities=25% Similarity=0.446 Sum_probs=177.5
Q ss_pred EEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1083 VELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
|+++||+++|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 169999999999999999999999999999999999999999999999999875 456778999
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.+.. .....+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-----------DRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 112 23455566666665443 3345679999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|++++|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 58999999999999865 9999999999999865
No 269
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=378.03 Aligned_cols=218 Identities=26% Similarity=0.460 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~iDG~di~~--~~l 1154 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999964 369999999999999999999999999999999999987 3 59999999999864 445
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCC---CCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES---ATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~---~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|.+|++||+.++... ..++ ++.++++..++.+++. ......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 6788999999999999999999999865311 1222 2444555566544332 223445668999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|+++++|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+.+
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 865
No 270
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.15 Aligned_cols=219 Identities=28% Similarity=0.450 Sum_probs=189.5
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 36999999999963 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|+.++||||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ...+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 6678899999999999999999999987521 11 1 234556666666654432 23455667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000689 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
++..
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9765
No 271
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-41 Score=381.50 Aligned_cols=214 Identities=28% Similarity=0.519 Sum_probs=188.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred EEccCC--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1163 IVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1163 ~VpQdp--~LF~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
||||+| .+|..|+++|+.++.. ..+. +.+.++++..++.++.... ...||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHH
Confidence 999998 4788899999986431 2232 3456677777776655443 3579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999998753 899999999999985 5999999999999999999999864
No 272
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=393.16 Aligned_cols=231 Identities=34% Similarity=0.517 Sum_probs=188.6
Q ss_pred eEEEEEEEEECCCCCC---------------------CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 000689 427 LIELKHVDFSYPSRPE---------------------VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~---------------------~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 485 (1350)
.|+++||++.|+..++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 4777777777754321 1379999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCCHHHH----hccEEEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccc
Q 000689 486 QVLLDGHDIKSLKLRWL----RQQIGLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 486 ~i~i~g~~~~~~~~~~~----r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t 558 (1350)
+|.++|.++...+...+ |+++|||+|++.+|.. |++||+.++... .+.++..+ .+.+.+..+ |++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~ 156 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLEN 156 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCh
Confidence 99999999988776543 4689999999999964 999999986321 12222111 122334444 6666
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEE
Q 000689 559 QVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVA 635 (1350)
Q Consensus 559 ~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~ 635 (1350)
.......+||||||||++|||||+.+|+||||||||++||+.+.+.+++.|.++. .++|+|+|||+++.+.. ||+|+
T Consensus 157 ~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 157 YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEE
Confidence 6677778999999999999999999999999999999999999999999999874 48999999999999865 99999
Q ss_pred EEeCCEEEEecChHHHHhccCCcHHHHHH
Q 000689 636 VLQQGSVSEIGTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 636 vl~~G~i~~~g~~~~l~~~~~~~~y~~l~ 664 (1350)
+|++|++++.|++++++.++.+...+.++
T Consensus 237 vL~~G~i~~~g~~~~l~~~~~~~~v~~~~ 265 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILNNPANDYVRTFF 265 (400)
T ss_pred EEECCEEEecCCHHHHHhCcccHHHHHHH
Confidence 99999999999999998764333344444
No 273
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-41 Score=378.40 Aligned_cols=218 Identities=31% Similarity=0.497 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++||+|+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999964 369999999999999999999999999999999999997 479999999999854 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|+.++|++|+|.+|+.|++||+.++.. .. .++++.++++..++++.. .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 677889999999999999999999986531 11 123445555665553211 1112345568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999866 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 765
No 274
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=375.55 Aligned_cols=224 Identities=30% Similarity=0.540 Sum_probs=189.8
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~ 1153 (1350)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 56999999999964 3699999999999999999999999999999999999863 69999999999875 45
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCC--CC-----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|++++|+||+|.+|+.|+++|+.++.. .. .++++.++++.+++.+.+. ........+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHH
Confidence 6678999999999999999999999986521 11 1234555666666544332 22344567899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998865 99999999999999999999
Q ss_pred HhhcCCCchh
Q 000689 1306 LLKNNPDGCY 1315 (1350)
Q Consensus 1306 Ll~~~~~g~y 1315 (1350)
+... +...+
T Consensus 232 ~~~~-~~~~~ 240 (250)
T PRK14240 232 LFTN-PKDKR 240 (250)
T ss_pred HHhC-CCChH
Confidence 9765 34433
No 275
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6.7e-41 Score=370.29 Aligned_cols=212 Identities=27% Similarity=0.479 Sum_probs=178.8
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
+|+++||+++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. ...++|++
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~ 79 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRR 79 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhh
Confidence 3789999999974311 269999999999999999999999999999999999999999999999999875 34567889
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
++|++|++.+|.. |++||+.+... ..+.++..+ .+.+.+..+ |++......+.+||||||||++||||++
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 152 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALV 152 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHh
Confidence 9999999999985 99999976432 112222111 123344444 6666677788899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 153 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 153 HDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999875 48999999999999865 9999999999998764
No 276
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-40 Score=377.90 Aligned_cols=220 Identities=30% Similarity=0.488 Sum_probs=183.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 20 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 36999999999963 359999999999999999999999999999999999865 799999999999864 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCCC---CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...++++++|++|++.+|+.|++||+.++.... ... .+.++++..++ ..++....+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAAL-------WDEVKDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCC-------CcchHHHHhcCcccCCHHH
Confidence 456788999999999999999999998753211 111 11222222211 1112234567788999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 249 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQ 249 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999998865 99999999999999999999
Q ss_pred HHhcc
Q 000689 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+..++
T Consensus 250 ~~~~~ 254 (268)
T PRK14248 250 IFTSP 254 (268)
T ss_pred HHhCC
Confidence 87653
No 277
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-41 Score=377.27 Aligned_cols=227 Identities=26% Similarity=0.500 Sum_probs=191.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~--~l 1154 (1350)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 3699999999999999999999999999999999999984 899999999998653 34
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--C-C----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--S-A----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|++||+.++.. . . .++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 1 1 1234566666666654332 223455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998765 999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 000689 1307 LKNNPDGCYARMI 1319 (1350)
Q Consensus 1307 l~~~~~g~y~~l~ 1319 (1350)
.+. +...|.+.+
T Consensus 233 ~~~-~~~~~~~~~ 244 (250)
T PRK14262 233 VER-PKNKLTEEY 244 (250)
T ss_pred HhC-CCChHHHHH
Confidence 865 344455433
No 278
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=8.7e-41 Score=380.30 Aligned_cols=224 Identities=25% Similarity=0.439 Sum_probs=188.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---Hhh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR 1158 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999876543 457
Q ss_pred cccEEEccCCccCcc-cHHHHhccCCC---CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1159 RHMAIVPQEPCLFAS-TIYENIAYGHE---SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~---~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||++.+|.+ |++||+.++.. ..+. +.+.++++..++.+. ......+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 889999999999986 99999976421 1122 233444555544332 2233467999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+|||||+++|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999864 37999999999999876 9999999999999999999998
Q ss_pred hcCCCchhHHHHH
Q 000689 1308 KNNPDGCYARMIQ 1320 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~ 1320 (1350)
+. +...+..++.
T Consensus 233 ~~-~~~~~~~~~~ 244 (269)
T PRK11831 233 AN-PDPRVRQFLD 244 (269)
T ss_pred cC-CcHHHHHHHH
Confidence 65 3445555554
No 279
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=376.99 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~iDG~di~~~--~l 1154 (1350)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999964 369999999999999999999999999999999999954 6 499999999998643 34
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|+.|++||+.++.. .. .++++.++++..++.+.+. +.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1234455666666543332 233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
++.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 865
No 280
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7.8e-41 Score=373.45 Aligned_cols=216 Identities=30% Similarity=0.484 Sum_probs=185.3
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-HhccE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~i 506 (1350)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 478999999963 35999999999999999999999999999999999999999999999999988776554 45679
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.+|.. |++||+.++.+. ...++.. ..+.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999875421 1111111 1223445555 67777778888999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 48999999999988765 99999999999999999988764
No 281
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=375.99 Aligned_cols=220 Identities=27% Similarity=0.484 Sum_probs=187.6
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCCC--
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRKY-- 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~iDG~di~~~-- 1152 (1350)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 467999999999963 369999999999999999999999999999999999986 4 689999999998653
Q ss_pred CHHHhhcccEEEccCCccCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1153 NLKSLRRHMAIVPQEPCLFA-STIYENIAYGHE--S-AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~--~-~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+...+|++++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+++.. .....+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKD-------RLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcCcCCH
Confidence 45578899999999999887 599999986421 1 11 2335566666666543322 22345678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecCh
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|+|++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778899999999999865 999999999999999999
Q ss_pred hHHhhc
Q 000689 1304 SHLLKN 1309 (1350)
Q Consensus 1304 ~eLl~~ 1309 (1350)
+++...
T Consensus 232 ~~~~~~ 237 (252)
T PRK14256 232 KKIFTT 237 (252)
T ss_pred HHHHhC
Confidence 999865
No 282
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=373.98 Aligned_cols=213 Identities=31% Similarity=0.510 Sum_probs=182.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC--CHHHhhcc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY--NLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~--~l~~lR~~ 1160 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 3699999999999999999999999999999999999999999999999998764 34577889
Q ss_pred cEEEccCCccCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEPCLFA-STIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~---~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
++|+||++.+|. .|+++|+.++.. ..+.+ ++.++++..++ +.........||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGL-----------AERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hHHHhcChhhcCHHHHHHHHH
Confidence 999999998886 599999986521 12222 23334444444 333444556899999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||++++|++|||||||++||+++...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999999999865 48999999999999965 999999999999999999998765
No 283
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-40 Score=373.97 Aligned_cols=218 Identities=33% Similarity=0.558 Sum_probs=187.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC--CHHHHhc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL--KLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~--~~~~~r~ 504 (1350)
+|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +..++++
T Consensus 1 ~l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 77 (240)
T PRK09493 1 MIEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQ 77 (240)
T ss_pred CEEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhh
Confidence 3789999999963 3599999999999999999999999999999999999999999999999998764 3456788
Q ss_pred cEEEEccCCCccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 505 QIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+++|++|++.++. .|++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++||||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~a 150 (240)
T PRK09493 78 EAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARA 150 (240)
T ss_pred ceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHH
Confidence 9999999998886 599999987631 112222111 223445554 67766777888999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
++.+|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 151 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 151 LAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999998875 48999999999999965 999999999999999999998765
No 284
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.5e-40 Score=372.32 Aligned_cols=233 Identities=28% Similarity=0.434 Sum_probs=199.1
Q ss_pred HHHHHHHccCCCCCCCCCCCccCCCCcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000689 399 AKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIER 478 (1350)
Q Consensus 399 ~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~ 478 (1350)
+.+.+++..+++.+. ..+.....+.|+++|+++.. .++|+|+||+|++||+++|+|+||||||||+++|+|
T Consensus 15 ~~~~~~~~~~~~~~~----~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~G 85 (282)
T cd03291 15 EGFGELLEKAKQENN----DRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILG 85 (282)
T ss_pred HHHHHHHhccccccc----ccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 355666665444221 12223344579999999962 259999999999999999999999999999999999
Q ss_pred CCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccc
Q 000689 479 FYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT 558 (1350)
Q Consensus 479 ~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t 558 (1350)
+++|++|+|.++| .|+|++|++.+|+.|++||+.++.. ....++.++++.+++.+.+..+|.++++
T Consensus 86 l~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~ 151 (282)
T cd03291 86 ELEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNT 151 (282)
T ss_pred CCCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccc
Confidence 9999999999998 4999999999999999999998643 2333455666667888889999999999
Q ss_pred hhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHH-HHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 000689 559 QVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEA-LDRFMIGRTTLVIAHRLSTIRKADVVAVL 637 (1350)
Q Consensus 559 ~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~l~~~~~~d~i~vl 637 (1350)
.+++.+.+||||||||++|||||+.+|++|||||||++||+++...+.+. ++.+.+++|+|+|||+++.+..||+|++|
T Consensus 152 ~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l 231 (282)
T cd03291 152 VLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILIL 231 (282)
T ss_pred eecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999988875 45666689999999999999889999999
Q ss_pred eCCEEEEecChHHHHhc
Q 000689 638 QQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 638 ~~G~i~~~g~~~~l~~~ 654 (1350)
++|++++.|+++++...
T Consensus 232 ~~G~i~~~g~~~~~~~~ 248 (282)
T cd03291 232 HEGSSYFYGTFSELQSL 248 (282)
T ss_pred ECCEEEEECCHHHHHhc
Confidence 99999999999998764
No 285
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-41 Score=380.08 Aligned_cols=213 Identities=29% Similarity=0.472 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCccCcc-cHHHHhccCCC----------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE----------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~----------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
+|+||++.++.+ |++||+.++.. ...++++.++++..++.+++...| .+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHH
Confidence 999999876654 99999986521 112345677788887766554433 47999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+||||++.+|+||||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 38999999999999965 9999999999999999999986
Q ss_pred h
Q 000689 1308 K 1308 (1350)
Q Consensus 1308 ~ 1308 (1350)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 286
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=371.58 Aligned_cols=214 Identities=30% Similarity=0.508 Sum_probs=181.3
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
.++++||+|+|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999997422 146999999999999999999999999999999999999999999999999998877643 3
Q ss_pred h-ccEEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 503 R-QQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r-~~i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
| +.++|++|++.+|+. |++||+.++.. ....++..+ .+.+.+..+ |++....+...+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998875 99999987421 112222111 123344444 666667778889999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~ 647 (1350)
||++.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999874 4899999999999998889999999999998875
No 287
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=379.48 Aligned_cols=220 Identities=32% Similarity=0.545 Sum_probs=186.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|+.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 58999999999642 24699999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
||++|++ .++..|++|||.++... .+.++..+. +.+.+..+ |++........+||||||||++|||||+
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVER-----VDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHH-----HHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 45677999999986321 122222111 12222222 4555556667799999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|+||||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998863 8999999999999988999999999999999999988754
No 288
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=380.80 Aligned_cols=217 Identities=30% Similarity=0.516 Sum_probs=190.7
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCc---cEEEECCccCCCCCHHHh
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSS---GRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~---G~I~iDG~di~~~~l~~l 1157 (1350)
+.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 369999999999643 2369999999999999999999999999999999999999987 899999999988877788
Q ss_pred hcccEEEccCC--ccCcccHHHHhccCCC--CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1158 RRHMAIVPQEP--CLFASTIYENIAYGHE--SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 R~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
|++++||||+| .++..|++|||.++.. ..+.+ ++.++++..++.++....| .+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHH
Confidence 99999999998 4678899999987532 23333 3566777777776655443 5799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHh
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ |+|||++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 89999999999999889999999999999999999987
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 53
No 289
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.5e-41 Score=367.73 Aligned_cols=199 Identities=29% Similarity=0.505 Sum_probs=174.3
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEE
Q 000689 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~ 1163 (1350)
+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999641 369999999999999999999999999999999999999999999999998864 456788999
Q ss_pred EccCC--ccCcccHHHHhccCCCCC--CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1164 VPQEP--CLFASTIYENIAYGHESA--TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1164 VpQdp--~LF~gTIreNL~~~~~~~--td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
+||+| .+|..|++||+.++.... .++++.++++..++.++..+.| ..||||||||++|||||+++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467889999998754322 2356778888888776654443 46999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHh-cCCceEEEEecCchhhhh-cCEEEEEeCCeEE
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRA-CSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVA 1298 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~-~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv 1298 (1350)
|++|||||||++||+.+.+.+.+.|++. .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987 468999999999999975 9999999999985
No 290
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=376.52 Aligned_cols=222 Identities=27% Similarity=0.479 Sum_probs=183.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--C
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++... +
T Consensus 11 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 36999999999963 3599999999999999999999999999999999999985 799999999998643 2
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcC--CCCccchhcCCCCCCChHHHHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKL--PDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkqr 574 (1350)
...+|+.++||+|++.+|+.|++||+.++.. ..+.++..+. +.+.+..+ .+...........+||||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGV-----VENALRSAALWDETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCCcchhhhhcCChhhCCHHHHHH
Confidence 3456788999999999999999999987532 1222221111 11222222 1111234556778999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999976
Q ss_pred cc
Q 000689 654 KG 655 (1350)
Q Consensus 654 ~~ 655 (1350)
.+
T Consensus 243 ~~ 244 (258)
T PRK14268 243 NP 244 (258)
T ss_pred CC
Confidence 53
No 291
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=341.88 Aligned_cols=220 Identities=31% Similarity=0.487 Sum_probs=189.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
++++.+++++|++ ...+++||||+++.||++||.|||||||||+++.|..++.|++|+|++||.|.... +...|++|
T Consensus 1 Ml~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~I 77 (245)
T COG4555 1 MLEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKI 77 (245)
T ss_pred CeeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhc
Confidence 4789999999985 34589999999999999999999999999999999999999999999999998654 56678899
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+++-+.-|+.. |++|||.|...-.......-.++.+++.+ .| +++.....+..++|-|+||||+|||||++||
T Consensus 78 GVl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k---~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P 152 (245)
T COG4555 78 GVLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSK---RL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDP 152 (245)
T ss_pred ceecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHH---Hh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCC
Confidence 999988888765 99999998643222222222344443333 33 6667777778899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMI-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++||||||+||..+.+.+.+.+.+++. |++||+.||.++.++. ||+++++.+|+++..|+.+++.++
T Consensus 153 ~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 153 SILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred CeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999999999999999999999875 9999999999999985 999999999999999999988764
No 292
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-41 Score=369.75 Aligned_cols=209 Identities=27% Similarity=0.484 Sum_probs=180.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999988753 356788999
Q ss_pred EEccCCccCcc-cHHHHhccCCC--CC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+|.. |+++|+.++.. .. .++++.++++..++.++.... ..+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRL-----------VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976311 11 233466677777776554332 35799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-C-CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-S-GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~-g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
++.+|++|||||||++||+++.+.+.+.|++.. + |+|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999999865 3 7899999999999876 999999999999999998775
No 293
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.09 Aligned_cols=218 Identities=33% Similarity=0.521 Sum_probs=185.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--------
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-------- 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-------- 498 (1350)
+++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 5899999999974 35999999999999999999999999999999999999999999999999986532
Q ss_pred HHHHhccEEEEccCCCccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHH
Q 000689 499 LRWLRQQIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 574 (1350)
...+|+.++||+|++.+|+ .|++||+.++.. ....++..+ .+.+.+..+ |++......+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3456789999999999886 599999987421 112221111 123444444 66666677788999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998875 48999999999999975 9999999999999999999987
Q ss_pred hc
Q 000689 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 65
No 294
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=374.93 Aligned_cols=218 Identities=26% Similarity=0.507 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~iDG~di~~--~~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999964 36999999999999999999999999999999999999987 6999999999864 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|+.++||||+|.+|+.|++||+.++.. .. . ++.+.++++..++.+.+. ......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 11 1 123444555556554332 234556778999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999876 899999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 765
No 295
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=379.01 Aligned_cols=220 Identities=31% Similarity=0.512 Sum_probs=190.1
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--C
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--Y 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~ 1152 (1350)
.+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 446999999999963 3699999999999999999999999999999999999884 89999999999865 4
Q ss_pred CHHHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChh
Q 000689 1153 NLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
+...+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986421 11 1 234566666666654433 2345566789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChh
Q 000689 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1226 QrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~ 1304 (1350)
||||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+|++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000689 1305 HLLKN 1309 (1350)
Q Consensus 1305 eLl~~ 1309 (1350)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99765
No 296
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-41 Score=380.99 Aligned_cols=217 Identities=34% Similarity=0.509 Sum_probs=180.7
Q ss_pred EEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH----hc
Q 000689 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL----RQ 504 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~----r~ 504 (1350)
.++|++++|+. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 45678888853 358999999999999999999999999999999999999999999999999987765443 46
Q ss_pred cEEEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 505 QIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+++|++|++.+|. .|++||+.++... ....+..+ .+.+.+..+ |++........+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 7999999999885 5999999875321 11111111 112333333 555556666779999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhcc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
+.+|+||||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+..
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999998874 38999999999999865 9999999999999999999998653
No 297
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=379.92 Aligned_cols=221 Identities=28% Similarity=0.487 Sum_probs=186.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++||+++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999999743234699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCCC--cccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEPA--LFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
|||+|+|. ++..|+.|||.++.. ..+.++..+.+ .+.+..+ |+..........||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~ 156 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRV-----DEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIA 156 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 667899999987632 22333322211 1222222 4444455567899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|++++++..
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 157 LRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999998853 8999999999999988999999999999999999998754
No 298
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-40 Score=385.79 Aligned_cols=232 Identities=31% Similarity=0.470 Sum_probs=188.7
Q ss_pred eEEEEEEEEECCCCC-------CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH
Q 000689 427 LIELKHVDFSYPSRP-------EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-------~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~ 499 (1350)
.|+++|++++|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.++|.++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 589999999996321 2469999999999999999999999999999999999999999999999999988764
Q ss_pred H---HHhccEEEEccCC--Cccc-ccHHHHhhcCC---CCCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCCh
Q 000689 500 R---WLRQQIGLVSQEP--ALFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSG 569 (1350)
Q Consensus 500 ~---~~r~~i~~v~Q~~--~lf~-~ti~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSg 569 (1350)
. .+|++|+||+|+| .|++ .||.+|+..+. .....++.. ..+.+.+..+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR-----EKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 5678899999998 3554 39999986421 111222211 1223344443 443 234567789999
Q ss_pred HHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|||||++|||||+.+|++||+||||++||..+...+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999875 38999999999999975 9999999999999999
Q ss_pred ChHHHHhccCCcHHHHHHH
Q 000689 647 THDELIAKGENGVYAKLIR 665 (1350)
Q Consensus 647 ~~~~l~~~~~~~~y~~l~~ 665 (1350)
+.+++++++.+.+.+.++.
T Consensus 238 ~~~~~~~~p~hpyt~~ll~ 256 (327)
T PRK11308 238 TKEQIFNNPRHPYTQALLS 256 (327)
T ss_pred CHHHHhcCCCCHHHHHHHH
Confidence 9999998754444344443
No 299
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.4e-41 Score=372.82 Aligned_cols=216 Identities=25% Similarity=0.457 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~i 1161 (1350)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877655 45789
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhcc
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVR 1238 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr 1238 (1350)
+|+||++.+|.+ |++||+.++.+ ....++..+ .+++++..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE-----KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 99999986432 112221111 122333333 44444455567899999999999999999
Q ss_pred CCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1239 KAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1239 ~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
+|++|||||||++||+++.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 48999999999988765 99999999999999999998864
No 300
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=376.24 Aligned_cols=219 Identities=32% Similarity=0.518 Sum_probs=185.2
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 47999999999964 359999999999999999999999999999999999987 689999999999863 45
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC--CCH---HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--ADL---NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~~~---~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
...+|+.++||+|++.+|..|++||+.++... ... +++.++++..++ ..++++.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHH
Confidence 66788899999999999988999999986431 111 112222222222 223344566777899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-----------CE
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQ-----------GS 641 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~-----------G~ 641 (1350)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778999999999999865 999999996 67
Q ss_pred EEEecChHHHHhc
Q 000689 642 VSEIGTHDELIAK 654 (1350)
Q Consensus 642 i~~~g~~~~l~~~ 654 (1350)
+++.|+.+++...
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999765
No 301
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-41 Score=376.81 Aligned_cols=218 Identities=29% Similarity=0.504 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc---CCC--CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF---YEP--SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl---~~p--~~G~I~iDG~di~~~--~l 1154 (1350)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999964 3699999999999999999999999999999999997 344 589999999998764 34
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|++||+.++.. .. .+++++++++..++.+++. +.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 677889999999999999999999986421 11 1234556666666544332 233455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 865
No 302
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=379.00 Aligned_cols=214 Identities=29% Similarity=0.540 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC-HHHhhccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN-LKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~-l~~lR~~i 1161 (1350)
++++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+++++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 236999999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEccCCc--cCcccHHHHhccCCCC--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEPC--LFASTIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~--LF~gTIreNL~~~~~~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+|+||+|. ++..|++|||.++... .+ ++++.++++..++.++.. .....||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-----------RSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-----------CCcccCCHHHHHHHHHH
Confidence 99999985 6778999999875321 22 233455566666655443 33467999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 48999999999999988999999999999999999998754
No 303
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-40 Score=387.01 Aligned_cols=235 Identities=25% Similarity=0.424 Sum_probs=188.5
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CcEEEECCeeCCCCCHHHH
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT---SGQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~i~g~~~~~~~~~~~ 502 (1350)
.++++|++++|+.+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++..++.+.+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 699999999996421 246999999999999999999999999999999999999996 9999999999998877654
Q ss_pred h----ccEEEEccCC--Cccc-ccHHHHhhcCC---CCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 503 R----QQIGLVSQEP--ALFA-TTIKENILLGR---PDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 503 r----~~i~~v~Q~~--~lf~-~ti~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
+ ++|+||+|+| .+++ .|+.+|+.... ...+.++..+.+ ..+.+. ..||++. ..++..+.+||||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~--~~~L~~-vgL~~~~-~~~~~~p~~LSgG~~ 167 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEES--VRMLDA-VKMPEAR-KRMKMYPHEFSGGMR 167 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHH--HHHHHH-cCCCChH-HHhcCCcccCCHHHH
Confidence 3 4799999998 4554 38888775321 112222222111 111222 2344433 346788899999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|+|.|+++
T Consensus 168 QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~~ 247 (330)
T PRK09473 168 QRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNAR 247 (330)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998854 8999999999999975 9999999999999999999
Q ss_pred HHHhccCCcHHHHHHH
Q 000689 650 ELIAKGENGVYAKLIR 665 (1350)
Q Consensus 650 ~l~~~~~~~~y~~l~~ 665 (1350)
++.+.+.+.+.+.++.
T Consensus 248 ~i~~~p~~pyt~~l~~ 263 (330)
T PRK09473 248 DVFYQPSHPYSIGLLN 263 (330)
T ss_pred HHHhCCCCHHHHHHHH
Confidence 9998754444444443
No 304
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-40 Score=376.15 Aligned_cols=218 Identities=30% Similarity=0.472 Sum_probs=183.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC--CCCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK--SLKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~--~~~~ 499 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 5899999999964 3599999999999999999999999999999999999987 4999999999987 4455
Q ss_pred HHHhccEEEEccCCCcccc-cHHHHhhcCCC--C--CCHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChH
Q 000689 500 RWLRQQIGLVSQEPALFAT-TIKENILLGRP--D--ADLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGG 570 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~--~--~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 570 (1350)
..+|++++|++|++.+|.. |+.||+.++.. . ...++ +.++++..++.+ .+.......+.+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWD-------EVKDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCcc-------chhhhhccChhhCCHH
Confidence 6678899999999999976 99999987531 1 01222 222222222211 1223456677899999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000689 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 98765
No 305
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.1e-41 Score=366.31 Aligned_cols=203 Identities=26% Similarity=0.439 Sum_probs=179.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|++ .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999998764 56788999
Q ss_pred EEccCCccC-cccHHHHhccCC--CCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1163 IVPQEPCLF-ASTIYENIAYGH--ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1163 ~VpQdp~LF-~gTIreNL~~~~--~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
||||++.+| ..|++||+.++. ...+++++.++++..++.+.... ....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 579999997642 12345677788888888765443 2357999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|++|||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 58999999999999865 9999999999999876
No 306
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=386.04 Aligned_cols=227 Identities=27% Similarity=0.445 Sum_probs=188.9
Q ss_pred cEEEEEEEEECCCCC-------CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH
Q 000689 1082 EVELKHVDFSYPSRP-------DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-------~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l 1154 (1350)
-|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997421 2469999999999999999999999999999999999999999999999999988864
Q ss_pred ---HHhhcccEEEccCCc--cCc-ccHHHHhccC---CCCCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCC
Q 000689 1155 ---KSLRRHMAIVPQEPC--LFA-STIYENIAYG---HESAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1155 ---~~lR~~i~~VpQdp~--LF~-gTIreNL~~~---~~~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
..+|++|+||||+|. |+. -|+.+|+... +.... .+.+.++++.+++.+ +.++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 357889999999994 554 4898888532 11112 234566666666632 12232 3457
Q ss_pred CChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEE
Q 000689 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVA 1298 (1350)
Q Consensus 1222 LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIv 1298 (1350)
||||||||++|||||+.+|+|||+||||++||..+...|.+.|+++.+ |+|+|+|||+++.+.. ||+|+||.+|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 8999999999999975 9999999999999
Q ss_pred EecChhHHhhcCCCchhHHHH
Q 000689 1299 ELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1299 E~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|.|++++++++ +...|.+.+
T Consensus 235 e~g~~~~~~~~-p~hpyt~~l 254 (327)
T PRK11308 235 EKGTKEQIFNN-PRHPYTQAL 254 (327)
T ss_pred EECCHHHHhcC-CCCHHHHHH
Confidence 99999999986 555676543
No 307
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=372.89 Aligned_cols=220 Identities=30% Similarity=0.523 Sum_probs=185.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--C
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~~--~ 498 (1350)
+.|+++|++|+|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 3 PKIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred ceEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 36899999999963 35999999999999999999999999999999999999997 69999999998643 4
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC--CC-HHHH----HHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--AD-LNEI----EEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~~-~~~~----~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|+.++||+|++.+|+.|++||+.++... .. .++. .++.+..++ .+++.+.....+.+|||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~Gq 152 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAAL-------WDEVKDNLHKSGLALSGGQ 152 (251)
T ss_pred hHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCC-------chhhhhHhhCCcccCCHHH
Confidence 55778899999999999989999999886321 11 1112 222222222 2223345677888999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 153 QQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988678999999999999876 89999999999999999999
Q ss_pred HHhcc
Q 000689 651 LIAKG 655 (1350)
Q Consensus 651 l~~~~ 655 (1350)
+...+
T Consensus 233 ~~~~~ 237 (251)
T PRK14249 233 IFSRP 237 (251)
T ss_pred HHhCC
Confidence 87654
No 308
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=379.42 Aligned_cols=219 Identities=27% Similarity=0.522 Sum_probs=187.5
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999964 369999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCC-----CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE-----SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-----~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
...+|++++||||++.+|..|++||+.++.. ...+++++++++..++...+.. .......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHH
Confidence 5678899999999999998999999986421 1123456667777666433321 234456789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEE-EEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIA-VIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~-Vl~~GrIvE~Gt~~eL 1306 (1350)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.++
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 765
No 309
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=9.7e-41 Score=385.19 Aligned_cols=214 Identities=24% Similarity=0.436 Sum_probs=183.7
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhc
Confidence 36999999999963 36999999999999999999999999999999999999999999999999997654 457899
Q ss_pred cEEEccCCccCc-ccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1161 MAIVPQEPCLFA-STIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
||||||+|.+|. .|++||+.+... ..+..+ +.++++..++ ++..++.+ .+||||||||++||
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~----~~LS~G~~qrl~la 150 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKL-------ENKADAKV----GELSGGMKRRLTLA 150 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------chHhcCch----hhCCHHHHHHHHHH
Confidence 999999999886 699999985321 123332 2333444433 33445555 46999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||+.+|++|+|||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 151 ~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 151 RALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999999999999875 48999999999999976 999999999999999999999754
No 310
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=5.1e-41 Score=371.23 Aligned_cols=204 Identities=34% Similarity=0.494 Sum_probs=172.7
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH----h
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS----L 1157 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~----l 1157 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcccEEEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1158 RRHMAIVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|++++|+||+|.+|.+ |++||+.++.. ... ++++.++++..++.++ ......+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 6789999999999876 99999987532 111 2234455555554433 3344568999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeE
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrI 1297 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 8999999999999888999999999975
No 311
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.1e-41 Score=370.65 Aligned_cols=208 Identities=38% Similarity=0.536 Sum_probs=175.6
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH----HH
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR----WL 502 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~----~~ 502 (1350)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999998876643 24
Q ss_pred hccEEEEccCCCcccc-cHHHHhhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 503 RQQIGLVSQEPALFAT-TIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
+++++|++|++.+|.. |++||+.++.... ...+. ...+.+.+..+ |++......+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 6789999999999876 9999998864311 11111 11223445554 6666677778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i 642 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||++++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998854 8999999999999888999999999974
No 312
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.5e-40 Score=375.51 Aligned_cols=218 Identities=32% Similarity=0.522 Sum_probs=186.1
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---------
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK--------- 498 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~--------- 498 (1350)
|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999974 36999999999999999999999999999999999999999999999999986543
Q ss_pred ----HHHHhccEEEEccCCCccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChH
Q 000689 499 ----LRWLRQQIGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGG 570 (1350)
Q Consensus 499 ----~~~~r~~i~~v~Q~~~lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 570 (1350)
...+|+.++|++|++.+|. .|+.||+.++.. ....++..+ .+.+.+..+ |++......+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2456889999999999885 699999987521 112222111 223445555 6666677788899999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|++|||||||++||+.+...+.+.|+++.+ |+|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 8999999999999865 99999999999999999
Q ss_pred hHHHHhcc
Q 000689 648 HDELIAKG 655 (1350)
Q Consensus 648 ~~~l~~~~ 655 (1350)
++++.+..
T Consensus 231 ~~~~~~~~ 238 (252)
T TIGR03005 231 PDEIFRQP 238 (252)
T ss_pred HHHHhcCC
Confidence 99997653
No 313
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=373.34 Aligned_cols=219 Identities=26% Similarity=0.417 Sum_probs=181.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~ 1160 (1350)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999964 36999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred cEEEccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1161 MAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
++|+||++.+|.+ |+++|+.++....+.++..+.++ +.+..++ +++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 99999987532222222222111 1111111 111112234567999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|+||||||||++||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||||++|++|++++.|+++++...
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999865 58999999999998755 999999999999999999999743
No 314
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.88 Aligned_cols=220 Identities=28% Similarity=0.494 Sum_probs=190.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEccCCccCcc-cHHHHhccCCCC----------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~----------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
|+||++.+|.+ |++||+.++... ..++++.++++..++.++... ....||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHH
Confidence 99999998876 999999875210 112345666666666554333 34679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||||++++|++|||||||++||+++.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999998865 48999999999999865 999999999999999999998743
Q ss_pred CCCchhHHHH
Q 000689 1310 NPDGCYARMI 1319 (1350)
Q Consensus 1310 ~~~g~y~~l~ 1319 (1350)
..+.+.+
T Consensus 229 ---~~~~~~~ 235 (255)
T PRK11231 229 ---GLLRTVF 235 (255)
T ss_pred ---HHHHHHh
Confidence 3455554
No 315
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.8e-40 Score=373.18 Aligned_cols=217 Identities=29% Similarity=0.513 Sum_probs=181.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC--------H
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN--------L 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~--------l 1154 (1350)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999964 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhcccEEEccCCccCc-ccHHHHhccCC---CCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFA-STIYENIAYGH---ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~-gTIreNL~~~~---~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
..+|++++||||+|.+|. .|++||+.++. .....++..+. +.+.++.+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 567889999999998885 69999997641 11222221111 12233332 333334455678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
+|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 48999999999999966 99999999999999999999976
Q ss_pred c
Q 000689 1309 N 1309 (1350)
Q Consensus 1309 ~ 1309 (1350)
.
T Consensus 234 ~ 234 (250)
T PRK11264 234 D 234 (250)
T ss_pred C
Confidence 5
No 316
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=373.34 Aligned_cols=218 Identities=32% Similarity=0.489 Sum_probs=183.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCCHHH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 6999999999998877778
Q ss_pred HhccEEEEccCCCcc-cccHHHHhhcCCCC----CCHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 502 LRQQIGLVSQEPALF-ATTIKENILLGRPD----ADLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~lf-~~ti~eNi~~g~~~----~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
+|+.|||++|++.+| ..|++||+.++... .... ++.++++..++. +.++......+.+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLW-------DEVKDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCC-------cchhhhhcCCcccCCHHHH
Confidence 889999999999765 56999999876321 0111 122222222221 1112344566789999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999864 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 765
No 317
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.6e-40 Score=377.58 Aligned_cols=229 Identities=31% Similarity=0.453 Sum_probs=188.1
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH
Q 000689 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++||+|+|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 58999999999631 134699999999999999999999999999999999999999999999999999877654
Q ss_pred ---HHhccEEEEccCCC--cc-cccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChH
Q 000689 501 ---WLRQQIGLVSQEPA--LF-ATTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGG 570 (1350)
Q Consensus 501 ---~~r~~i~~v~Q~~~--lf-~~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgG 570 (1350)
.+|+.|+||+|++. ++ ..|++||+.++.. ....++. ...+.+.+..+ |++ ......+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGG 154 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHH
Confidence 36778999999983 44 3699999975421 1111111 11223444444 664 4556778899999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 155 e~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 155 QLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 99999999999999999999999999999999999999998753 8999999999999975 99999999999999999
Q ss_pred hHHHHhccCCcHHHHH
Q 000689 648 HDELIAKGENGVYAKL 663 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l 663 (1350)
++++... .++.++.+
T Consensus 235 ~~~~~~~-~~~~~~~~ 249 (265)
T TIGR02769 235 VAQLLSF-KHPAGRNL 249 (265)
T ss_pred HHHHcCC-CCHHHHHH
Confidence 9999864 24455444
No 318
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=376.08 Aligned_cols=216 Identities=30% Similarity=0.499 Sum_probs=184.9
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC--------
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY-------- 1152 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~-------- 1152 (1350)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999964 3699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHhhcccEEEccCCccCcc-cHHHHhccCC---CCCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCC
Q 000689 1153 -----NLKSLRRHMAIVPQEPCLFAS-TIYENIAYGH---ESAT----ESEIIEAARLANADKFISSLPDGYKTFVGERG 1219 (1350)
Q Consensus 1153 -----~l~~lR~~i~~VpQdp~LF~g-TIreNL~~~~---~~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G 1219 (1350)
....+|++++||||+|.+|.. |++||+.++. .... ++++.++++..++.++. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 135678899999999999974 9999997632 1112 22345555555554432 13445
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeE
Q 000689 1220 VQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1220 ~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrI 1297 (1350)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999999875 48999999999999986 999999999999
Q ss_pred EEecChhHHhhc
Q 000689 1298 AELGSHSHLLKN 1309 (1350)
Q Consensus 1298 vE~Gt~~eLl~~ 1309 (1350)
++.|+++++++.
T Consensus 231 ~~~~~~~~~~~~ 242 (257)
T PRK10619 231 EEEGAPEQLFGN 242 (257)
T ss_pred EEeCCHHHhhhC
Confidence 999999999765
No 319
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=376.27 Aligned_cols=222 Identities=26% Similarity=0.458 Sum_probs=185.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~ 498 (1350)
..++++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 23 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 36999999999973 359999999999999999999999999999999999987 699999999999853 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCC--CCCHHH-HHHHHHHhchHHHHhcC--CCCccchhcCCCCCCChHHHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRP--DADLNE-IEEAARVANAYSFIIKL--PDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~~~~~-~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkq 573 (1350)
...++++++|++|++.+|..|++||+.++.. ....++ ..+. +.+.+..+ .+++.......+.+|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEI-----VEKSLRGAAIWDELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCcchHHHHHhcCcccCCHHHHH
Confidence 5567889999999999998999999987532 111111 1111 11111111 123445567788899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999997
Q ss_pred hcc
Q 000689 653 AKG 655 (1350)
Q Consensus 653 ~~~ 655 (1350)
..+
T Consensus 255 ~~~ 257 (271)
T PRK14238 255 SNP 257 (271)
T ss_pred cCC
Confidence 653
No 320
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=392.74 Aligned_cols=210 Identities=33% Similarity=0.566 Sum_probs=180.2
Q ss_pred CcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh----hcccEEEccCCccCc-c
Q 000689 1099 PIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL----RRHMAIVPQEPCLFA-S 1173 (1350)
Q Consensus 1099 ~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l----R~~i~~VpQdp~LF~-g 1173 (1350)
++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||.|+..++...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 48999999999999999999999999999999999999999999999999998876654 468999999999986 5
Q ss_pred cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeC
Q 000689 1174 TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDE 1247 (1350)
Q Consensus 1174 TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDE 1247 (1350)
|++||+.++.. ..+ ++++.++++..++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987531 112 244566777777766555443 5799999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchh-HHHHH
Q 000689 1248 ATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCY-ARMIQ 1320 (1350)
Q Consensus 1248 aTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y-~~l~~ 1320 (1350)
||++||+.+.+.+++.|++.. .|+|+|+|||+++.+.. ||+|++|++|+|++.|++++++.. +...| +.++.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~-~~~~~v~~~~~ 266 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN-PANDYVRTFFR 266 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC-cccHHHHHHHh
Confidence 999999999999999999864 48999999999999865 999999999999999999999876 44444 34443
No 321
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-40 Score=389.58 Aligned_cols=206 Identities=28% Similarity=0.406 Sum_probs=173.9
Q ss_pred CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCe----eCCCCCHHHH---h-ccEEEEccCCC
Q 000689 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGH----DIKSLKLRWL---R-QQIGLVSQEPA 514 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~----~~~~~~~~~~---r-~~i~~v~Q~~~ 514 (1350)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 5666665443 3 58999999999
Q ss_pred ccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEe
Q 000689 515 LFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLD 591 (1350)
Q Consensus 515 lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililD 591 (1350)
+|+ .|++||+.|+... .+.++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 997 6999999987421 1222211 1223334433 5555566677889999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhcc
Q 000689 592 EATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAKG 655 (1350)
Q Consensus 592 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 655 (1350)
||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+. .||+|++|++|++++.|++++++.++
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p 256 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNP 256 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCc
Confidence 99999999999999999998753 899999999999985 59999999999999999999998764
No 322
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=377.56 Aligned_cols=219 Identities=30% Similarity=0.534 Sum_probs=186.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-HHHHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-LRWLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-~~~~r~~ 505 (1350)
+++++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.
T Consensus 1 ml~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (274)
T PRK13644 1 MIRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKL 78 (274)
T ss_pred CEEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhh
Confidence 3789999999963 235999999999999999999999999999999999999999999999999997765 3567889
Q ss_pred EEEEccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 506 IGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+|||+|+|. ++..|++|||.++... .+.++..+. +.+.+..+ |++......+..||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral 151 (274)
T PRK13644 79 VGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGIL 151 (274)
T ss_pred eEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHH
Confidence 999999985 5677999999886421 222222221 12333344 666666777889999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 152 TMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998875 48999999999999988999999999999999999988654
No 323
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=373.20 Aligned_cols=219 Identities=32% Similarity=0.559 Sum_probs=184.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
|.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999974 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|+.++||+|++.+|+.|++||+.++... . .. +++.++++..++.+ ++.......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 55678899999999999989999999886321 1 11 12222222322221 22334566788999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998865 99999999999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 8765
No 324
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-40 Score=374.76 Aligned_cols=221 Identities=27% Similarity=0.479 Sum_probs=184.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++|++|+|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 6999999999973 359999999999999999999999999999999999997 3 58999999999864 345
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCCC---CHHHHHHHHHHhchHHHHhcC--CCCccchhcCCCCCCChHHHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLNEIEEAARVANAYSFIIKL--PDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkqr 574 (1350)
..+|+.+||++|++.+|+.|++||+.++.... ..++..+. +.+.+..+ .+.+.+.....+.+||||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEI-----VEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 56788999999999999899999998763211 12222111 11222222 1112234567788999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999999999999999999999998778999999999999865 99999999999999999999876
Q ss_pred cc
Q 000689 654 KG 655 (1350)
Q Consensus 654 ~~ 655 (1350)
++
T Consensus 244 ~~ 245 (259)
T PRK14274 244 NP 245 (259)
T ss_pred CC
Confidence 53
No 325
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.8e-40 Score=377.80 Aligned_cols=227 Identities=25% Similarity=0.424 Sum_probs=188.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
.|+++||+++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 6999999999963 3699999999999999999999999999999999999999999999999998776543 357
Q ss_pred ccEEEEccCCCcccc-cHHHHhhcCCCC---CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 504 QQIGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
++++|++|++.+|.. |+.||+.++... .+.++..+ .+.+.+..+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999976 999999875211 12111111 112233333 5555566677899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+..
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~- 235 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQANP- 235 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcCC-
Confidence 99999999999999999999999999999998753 7999999999999876 9999999999999999999987652
Q ss_pred CcHHHHHH
Q 000689 657 NGVYAKLI 664 (1350)
Q Consensus 657 ~~~y~~l~ 664 (1350)
...+..++
T Consensus 236 ~~~~~~~~ 243 (269)
T PRK11831 236 DPRVRQFL 243 (269)
T ss_pred cHHHHHHH
Confidence 33344443
No 326
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-40 Score=373.56 Aligned_cols=212 Identities=24% Similarity=0.414 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~i 1161 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999964 36999999999999999999999999999999999999999999999999998877664 35679
Q ss_pred EEEccCCccCcc-cHHHHhccCCCCC--------------CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHESA--------------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~--------------td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
+|+||++.+|.+ |++||+.++.... .++++.++++.. |++.........|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI-----------GLADEADRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc-----------CCchhhcCChhhCCHHH
Confidence 999999999986 9999998753210 112233333333 34434445567899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|||++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999976 99999999999999999999
Q ss_pred Hhh
Q 000689 1306 LLK 1308 (1350)
Q Consensus 1306 Ll~ 1308 (1350)
++.
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 864
No 327
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.3e-40 Score=361.91 Aligned_cols=200 Identities=36% Similarity=0.572 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCC--CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 428 IELKHVDFSYPSRPE--VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~--~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 478999999974311 3699999999999999999999999999999999999999999999999 5
Q ss_pred EEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 506 IGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 506 i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|+|++|+|.+|+.|++||+.++.. .+.++..++++.+++.+++..+|.|+++.+++.+.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999753 3445667777788889999999999999999999999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHH-HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000689 586 AILLLDEATSALDSESEKLVQE-ALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~-~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~ 641 (1350)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 456553 4799999999999998899999999985
No 328
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=377.31 Aligned_cols=216 Identities=29% Similarity=0.452 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 23599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEccCCc--cCcccHHHHhccCCCC--CCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHH
Q 000689 1162 AIVPQEPC--LFASTIYENIAYGHES--ATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIA 1233 (1350)
Q Consensus 1162 ~~VpQdp~--LF~gTIreNL~~~~~~--~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiA 1233 (1350)
+|+||+|. ++..|+++|+.++... ... +++.++++..++.++.. ....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-----------YEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CCcccCCHHHHHHHHHH
Confidence 99999994 4556899999875321 222 34455566666554332 33467999999999999
Q ss_pred HHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhhcCEEEEEeCCeEEEecChhHHhhc
Q 000689 1234 RAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1234 RALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||++.+|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+..||||++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999988999999999999999999998764
No 329
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=376.11 Aligned_cols=219 Identities=32% Similarity=0.498 Sum_probs=188.2
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~ 1153 (1350)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46999999999963 3699999999999999999999999999999999999985 48999999999864 45
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCC------CCC-HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE------SAT-ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~------~~t-d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|++++|+||+|.+|+.|++||+.++.. +.+ ++.+.++++.+++.+++.. .....+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999986421 111 2335566777777554432 2234556899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe-----CCeEEEe
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID-----DGKVAEL 1300 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~-----~GrIvE~ 1300 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999876 99999998 5999999
Q ss_pred cChhHHhhc
Q 000689 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999999765
No 330
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-40 Score=390.82 Aligned_cols=218 Identities=31% Similarity=0.533 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|++||.++..++. .|+++
T Consensus 19 ~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 19 LLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred eEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 369999999999999999999999999999999999999999999999999987664 47789
Q ss_pred EEEccCCccCcc-cHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||+|++.||.. |++|||.++.. ..+. +++.++++..++.++..+. ..+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-----------~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRK-----------PHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998642 1222 3455666666666554443 3579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCC
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNP 1311 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~ 1311 (1350)
||+++|++||||||||+||..+...+.+.|++.. .|.|+|+|||+++.+.. ||||+||++|++++.|+++++..+ |
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~-p 241 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH-P 241 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC-C
Confidence 9999999999999999999999999998887764 37999999999999755 999999999999999999999976 5
Q ss_pred CchhH
Q 000689 1312 DGCYA 1316 (1350)
Q Consensus 1312 ~g~y~ 1316 (1350)
...|.
T Consensus 242 ~~~~~ 246 (377)
T PRK11607 242 TTRYS 246 (377)
T ss_pred ccHHH
Confidence 65543
No 331
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.1e-40 Score=367.29 Aligned_cols=203 Identities=37% Similarity=0.642 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999998766543 56899
Q ss_pred EEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++... ...+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDR-----------KPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhC-----------ChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986521 122 2234555666666555443 335799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
++++|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999865 38999999999999876 9999999999999986
No 332
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=370.57 Aligned_cols=218 Identities=27% Similarity=0.454 Sum_probs=183.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH-HHhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR-WLRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~-~~r~~ 505 (1350)
+|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 6899999999963 3699999999999999999999999999999999999999999999999999887754 46788
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|++|++.+|.. |++||+.++......++..+.+ .+.+..++ +++........+||||||||++|||||+.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999975 9999998864322222222211 12222221 122233456778999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|+||||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998875 58999999999998755 99999999999999999999864
No 333
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-41 Score=360.32 Aligned_cols=217 Identities=30% Similarity=0.569 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc---cCCCCCHHHhh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK---DIRKYNLKSLR 1158 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~---di~~~~l~~lR 1158 (1350)
.|+.+|++..|+. .++++||||+|+.||.+|+.||||||||||+++|.|+..|++|+|.+||. |.++... -.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hh
Confidence 3788899998864 46899999999999999999999999999999999999999999999999 7776433 34
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCC----C----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHE----S----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~----~----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++||+|+|+..||. .||++||+||.+ . .....+.+-++.+++..+-..-| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 68999999999885 699999999962 1 12334556677777766655544 6899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
+||||||...|++|+||||.++||+.-.+.+++-|++... |.|++.|||+.+.+.. ||||+||++|+|.+.|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998653 8999999999998855 999999999999999999999
Q ss_pred hhcCCCchh
Q 000689 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
... |+..|
T Consensus 226 ~~~-P~s~f 233 (345)
T COG1118 226 YDH-PASRF 233 (345)
T ss_pred hcC-CCccc
Confidence 876 66654
No 334
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-40 Score=384.96 Aligned_cols=231 Identities=24% Similarity=0.385 Sum_probs=184.3
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCcEEEECCeeCCCCCHHH
Q 000689 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD----PTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++|++++|+.... ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999974321 359999999999999999999999999999999999998 48999999999998887765
Q ss_pred Hh----ccEEEEccCCC--ccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCcc---chhcCCCCCCC
Q 000689 502 LR----QQIGLVSQEPA--LFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD---TQVRERGVQLS 568 (1350)
Q Consensus 502 ~r----~~i~~v~Q~~~--lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~~g~~LS 568 (1350)
++ +.|+||+|+|. +++ .|+.+|+..... ....++..+ .+.+.+..+ |++ ...+..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~-----~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQ-----RAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 44 37999999984 443 366665542110 112111111 122333333 443 34577889999
Q ss_pred hHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000689 569 GGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEI 645 (1350)
Q Consensus 569 gGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 645 (1350)
||||||++|||||+.+|++||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999885 38999999999999864 999999999999999
Q ss_pred cChHHHHhccCCcHHHHHH
Q 000689 646 GTHDELIAKGENGVYAKLI 664 (1350)
Q Consensus 646 g~~~~l~~~~~~~~y~~l~ 664 (1350)
|+++++++++.+.+.+.++
T Consensus 236 g~~~~~~~~p~hpyt~~ll 254 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQALL 254 (326)
T ss_pred CCHHHHhhCCCChHHHHHH
Confidence 9999999775444444444
No 335
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.4e-41 Score=373.01 Aligned_cols=212 Identities=30% Similarity=0.475 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhccc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~i 1161 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEccCCccCcc-cHHHHhccCCCCC--CHHHH-HHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGHESA--TESEI-IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~~~~--td~ei-~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
+|+||++.+|.. |+++|+.++.... .+++. .++++..+ +++........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653211 11221 22222221 1223334455679999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
++|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998753 7999999999999986 9999999999999999999983
No 336
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-40 Score=374.49 Aligned_cols=228 Identities=26% Similarity=0.466 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~--~l 1154 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3699999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
...|++++|+||+|.+|+.|++||+.++.. +. . ++.+.++++..++.+. +.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-------VKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-------hHHHhhcChhhCCHHHH
Confidence 677889999999999999999999987532 11 1 2234555555555332 22335566778999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++.+|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999965 999999999999999999999
Q ss_pred hhcCCCchhHHHHH
Q 000689 1307 LKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1307 l~~~~~g~y~~l~~ 1320 (1350)
.+. +...+.+.+.
T Consensus 236 ~~~-~~~~~~~~~~ 248 (253)
T PRK14261 236 FEN-PHEELTENYI 248 (253)
T ss_pred HhC-CCcHHHHHHh
Confidence 865 4444555443
No 337
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.4e-40 Score=355.22 Aligned_cols=178 Identities=34% Similarity=0.623 Sum_probs=166.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+.+ +.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5799999999753 23699999999999999999999999999999999999999999999999998766 667889999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 357999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhhcCEEEEEeCCeEEEec
Q 000689 1243 MLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~G 1301 (1350)
|||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 338
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-41 Score=369.97 Aligned_cols=206 Identities=33% Similarity=0.518 Sum_probs=175.8
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
|+++|++++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996411 1369999999999999999999999999999999999999999999999998863 46789
Q ss_pred EEEccCCccCc-ccHHHHhccCCC--CC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHE--SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~--~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+||||+|.+|. .|++||+.++.. .. .++++.++++..++.++.... ..+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAY-----------PHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHHHHHH
Confidence 99999999887 699999986421 11 134456666666666554433 3579999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEe--CCeEEEecChh
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVID--DGKVAELGSHS 1304 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~--~GrIvE~Gt~~ 1304 (1350)
||+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|+ +|++++.++.+
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 219 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEVD 219 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEec
Confidence 9999999999999999999999999999999864 38999999999998865 99999999 79999988753
No 339
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-40 Score=374.90 Aligned_cols=218 Identities=28% Similarity=0.478 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCC--CCCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIR--KYNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~--~~~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 369999999999999999999999999999999999986 47999999999985 3456
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCC--C---CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES--A---TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~--~---td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++++|++|+|.+|+.|++||+.++... . .++++.++++.+++.+++.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345556677777655432 2345567899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe---------CCeEEE
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID---------DGKVAE 1299 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~---------~GrIvE 1299 (1350)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred ecChhHHhhc
Q 000689 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|+++++.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 340
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=374.87 Aligned_cols=219 Identities=33% Similarity=0.543 Sum_probs=185.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC--------
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL-------- 497 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~-------- 497 (1350)
+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 3699999999999999999999999999999999999999999999999988542
Q ss_pred -----CHHHHhccEEEEccCCCcccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchh-cCCCCCC
Q 000689 498 -----KLRWLRQQIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQV-RERGVQL 567 (1350)
Q Consensus 498 -----~~~~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~-~~~g~~L 567 (1350)
....+++.++||+|++.+|.. |++||+.++.. .....+..+ .+.+.+..+ |+.... ...+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccC
Confidence 134667899999999999975 99999987421 112111111 123344444 565543 6677899
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEI 645 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~ 645 (1350)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999885 48999999999999986 999999999999999
Q ss_pred cChHHHHhc
Q 000689 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++...
T Consensus 234 ~~~~~~~~~ 242 (257)
T PRK10619 234 GAPEQLFGN 242 (257)
T ss_pred CCHHHhhhC
Confidence 999998764
No 341
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=376.39 Aligned_cols=218 Identities=28% Similarity=0.488 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~l 1154 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 369999999999999999999999999999999999987 699999999999853 455
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CCCHH-----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SATES-----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~td~-----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|++||+.++.. +.+++ .+.++++..++.+ ++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-------ELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-------hHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 12221 2233344433322 233334556678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 865
No 342
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=376.82 Aligned_cols=220 Identities=30% Similarity=0.558 Sum_probs=187.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 69999999999632 34699999999999999999999999999999999999999999999999999877777888999
Q ss_pred EEEccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+|. ++..|++|||.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4567999999886321 22222211 122333333 5555667777899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999998753 4899999999999888999999999999999998888654
No 343
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=380.50 Aligned_cols=223 Identities=30% Similarity=0.502 Sum_probs=183.8
Q ss_pred cceEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC----C-
Q 000689 425 SGLIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS----L- 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~----~- 497 (1350)
.+.|+++|++++|+++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1359999999999999999999999999999999999999999999999998852 2
Q ss_pred CHHHHhccEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHH
Q 000689 498 KLRWLRQQIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQK 572 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqk 572 (1350)
+...+|+.|+||+|+| .+|..|++||+.++... ...++..+.+ .+.+..+ |+. ......+.+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456788999999998 46778999999886421 2222222211 1222222 332 345567789999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998875 38999999999998865 9999999999999999998
Q ss_pred HHHhc
Q 000689 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 88653
No 344
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-40 Score=371.78 Aligned_cols=229 Identities=27% Similarity=0.493 Sum_probs=187.3
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCCC--
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKSL-- 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~~-- 497 (1350)
++.|+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 457999999999973 359999999999999999999999999999999999986 4 689999999998643
Q ss_pred CHHHHhccEEEEccCCCccc-ccHHHHhhcCCCC---CCHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCCh
Q 000689 498 KLRWLRQQIGLVSQEPALFA-TTIKENILLGRPD---ADLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSG 569 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~-~ti~eNi~~g~~~---~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 569 (1350)
+...+|+.++||+|++.+|. .|++||+.++... .+.++ +.++++..++.++ +....+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDE-------VKDRLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcCcCCH
Confidence 34567889999999999987 5999999875311 11121 2222222222211 12344567789999
Q ss_pred HHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000689 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998778999999999999865 999999999999999999
Q ss_pred HHHHhccCCcHHHHH
Q 000689 649 DELIAKGENGVYAKL 663 (1350)
Q Consensus 649 ~~l~~~~~~~~y~~l 663 (1350)
+++...+....++.+
T Consensus 232 ~~~~~~~~~~~~~~~ 246 (252)
T PRK14256 232 KKIFTTPEKKQTEDY 246 (252)
T ss_pred HHHHhCCCcHHHHHH
Confidence 999866433333333
No 345
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=378.84 Aligned_cols=221 Identities=32% Similarity=0.550 Sum_probs=185.6
Q ss_pred eEEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHH
Q 000689 427 LIELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~ 500 (1350)
.|+++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 14699999999999999999999999999999999999999999999999998653 245
Q ss_pred HHhccEEEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHH
Q 000689 501 WLRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri 575 (1350)
..++.|+|++|+| .+|..|++|||.++.. ..+.++..+ .+.+.+..+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6778899999998 5777899999987532 122222221 123344444 665 355777889999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 58999999999999865 99999999999999999998865
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 346
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-40 Score=385.34 Aligned_cols=229 Identities=22% Similarity=0.349 Sum_probs=187.0
Q ss_pred cEEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC----CCccEEEECCccCCCCCHHH
Q 000689 1082 EVELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE----PSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~iDG~di~~~~l~~ 1156 (1350)
-++++|++++|+.+.. .++|+||||+|++||++||||+||||||||+++|.|+++ |++|+|.+||.|+..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975322 359999999999999999999999999999999999997 48999999999999988776
Q ss_pred hhc----ccEEEccCCc--cCc-ccHHHHh----ccCCC---CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCC
Q 000689 1157 LRR----HMAIVPQEPC--LFA-STIYENI----AYGHE---SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQL 1222 (1350)
Q Consensus 1157 lR~----~i~~VpQdp~--LF~-gTIreNL----~~~~~---~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~L 1222 (1350)
+|+ +|+||||+|. ++. -|+.+|+ ..... ....+++.++++.+++.+.. ........+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhC
Confidence 553 6999999995 332 3555544 32211 01223466677777764321 1133456789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhh-hcCEEEEEeCCeEEE
Q 000689 1223 SGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1223 SgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE 1299 (1350)
|||||||++|||||+.+|++||+||||++||+.+...|.+.|+++. .|.|+|+|||+++.+. .||||+||.+|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999875 3899999999999995 599999999999999
Q ss_pred ecChhHHhhcCCCchhHHHH
Q 000689 1300 LGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1300 ~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
.|++++++++ +...|.+.+
T Consensus 235 ~g~~~~~~~~-p~hpyt~~l 253 (326)
T PRK11022 235 TGKAHDIFRA-PRHPYTQAL 253 (326)
T ss_pred ECCHHHHhhC-CCChHHHHH
Confidence 9999999976 566676544
No 347
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.7e-40 Score=367.98 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=173.2
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR 1158 (1350)
|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996421 236999999999999999999999999999999999999999999999999998877654 34
Q ss_pred -cccEEEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1159 -RHMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 -~~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+|.+|. .|++||+.++.. ... .+++.++++..++.+. .......||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 68999999999885 599999986321 112 1234445555544433 3344467999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEE
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVA 1298 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIv 1298 (1350)
+||||++++|+||||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999875 378999999999999889999999999986
No 348
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=367.35 Aligned_cols=213 Identities=28% Similarity=0.453 Sum_probs=177.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 3599999999999999999999999999999999999999999999999988653 356678899
Q ss_pred EEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.++.. |++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987421 111111111 112333333 444445566678999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
|++|||||||++||+++.+.+.+.|+++. + |+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998875 3 7899999999999875 999999999999999987764
No 349
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=377.09 Aligned_cols=219 Identities=32% Similarity=0.536 Sum_probs=185.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|+++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999632 3599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+| .+|+.|+.||+.++.. ..+.++..+ .+.+.+..+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 3677899999987532 122222211 112233333 4444455667799999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|++++++..
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999988753 899999999999985 5999999999999999999998754
No 350
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3e-40 Score=383.90 Aligned_cols=229 Identities=24% Similarity=0.416 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC---ccEEEECCccCCCCCHHHh
Q 000689 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS---SGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~iDG~di~~~~l~~l 1157 (1350)
-++++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996432 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cccEEEccCC--ccCc-ccHHHHhccC---CCCCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1158 R----RHMAIVPQEP--CLFA-STIYENIAYG---HESATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1158 R----~~i~~VpQdp--~LF~-gTIreNL~~~---~~~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
| ++|+||||+| .++. .|+.+|+... ....+.++ +.+.++.+++ |++.+ .++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL-------~~~~~-~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKM-------PEARK-RMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-------CChHH-HhcCCcccCC
Confidence 4 4799999999 3544 4777776421 11123333 3334444433 33322 2456678899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEe
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~ 1300 (1350)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ |.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 8899999999999975 999999999999999
Q ss_pred cChhHHhhcCCCchhHHHH
Q 000689 1301 GSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1301 Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|+++++++. |...|.+.+
T Consensus 244 g~~~~i~~~-p~~pyt~~l 261 (330)
T PRK09473 244 GNARDVFYQ-PSHPYSIGL 261 (330)
T ss_pred CCHHHHHhC-CCCHHHHHH
Confidence 999999986 666676643
No 351
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-40 Score=389.67 Aligned_cols=209 Identities=31% Similarity=0.458 Sum_probs=178.6
Q ss_pred CcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCc----cCCCCCHHHhh----cccEEEccCCcc
Q 000689 1099 PIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK----DIRKYNLKSLR----RHMAIVPQEPCL 1170 (1350)
Q Consensus 1099 ~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~----di~~~~l~~lR----~~i~~VpQdp~L 1170 (1350)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+| ++|+||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 6899999999999999999999999999999999999999999999995 67777665543 579999999999
Q ss_pred Cc-ccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEE
Q 000689 1171 FA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIM 1243 (1350)
Q Consensus 1171 F~-gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~IL 1243 (1350)
|+ .|++||+.++.. ..+. +.+.++++..++.++.... ..+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~-----------~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKK-----------PGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 699999987631 1222 3456677777776554333 3579999999999999999999999
Q ss_pred EEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCchhHHHH
Q 000689 1244 LLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1244 lLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|||||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.+ |...|.+.+
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~-p~~~~~~~~ 264 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN-PANDYVADF 264 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC-cchHHHHHH
Confidence 99999999999999999999998753 8999999999999854 999999999999999999999876 455555433
No 352
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=372.78 Aligned_cols=219 Identities=31% Similarity=0.512 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCC--CC---CCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFY--DP---TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~--~~---~~G~i~i~g~~~~~~--~~ 499 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 5899999999973 35999999999999999999999999999999999995 46 599999999998643 34
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCC--CC-CHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRP--DA-DLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~-~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+|+.++||+|++.+|+.|++||+.++.. .. ..++ +.++++..++. .++.+..+..+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIW-------DEVKDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCc-------hhHHHHHhcCcccCCHHHH
Confidence 567889999999999999999999987531 11 1111 22222222221 1223456677889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998865 999999999999999999999
Q ss_pred Hhcc
Q 000689 652 IAKG 655 (1350)
Q Consensus 652 ~~~~ 655 (1350)
.+.+
T Consensus 235 ~~~~ 238 (252)
T PRK14239 235 FMNP 238 (252)
T ss_pred HhCC
Confidence 7653
No 353
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2e-40 Score=367.31 Aligned_cols=209 Identities=33% Similarity=0.574 Sum_probs=175.9
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---Hh
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---LR 503 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~r 503 (1350)
|+++||+++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998776543 33
Q ss_pred -ccEEEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 504 -QQIGLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 504 -~~i~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
+.++||+|++.+|. .|++||+.++.. ..+..+..+ .+.+.+..+ |++......+.+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 599999987421 112111111 122344444 6666677778899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVS 643 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~ 643 (1350)
||+.+|+||||||||++||+++...+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 379999999999999889999999999985
No 354
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=371.55 Aligned_cols=220 Identities=30% Similarity=0.478 Sum_probs=183.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcC---CCC--CCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERF---YDP--TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~i~g~~~~~~--~~ 499 (1350)
+|+++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|+|+ ++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 6899999999963 3599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CHHHHHHHHHHhchHHHHhcC--CCCccchhcCCCCCCChHHHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLNEIEEAARVANAYSFIIKL--PDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkqr 574 (1350)
..+|+.++|+||++.+|..|++||+.++... . ..++..+. +.+.+..+ ++.+.+...+.+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQR-----VEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 5678899999999999988999999875321 1 11111111 11222222 2222345677788999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999998778999999999999865 99999999999999999999976
Q ss_pred c
Q 000689 654 K 654 (1350)
Q Consensus 654 ~ 654 (1350)
.
T Consensus 235 ~ 235 (250)
T PRK14245 235 N 235 (250)
T ss_pred C
Confidence 5
No 355
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=372.08 Aligned_cols=204 Identities=28% Similarity=0.448 Sum_probs=179.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999964 36999999999999999999999999999999999999999999999998763 567899
Q ss_pred EEEccCCccCc-ccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCC
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKA 1240 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p 1240 (1350)
+|+||+|.+|. .|++||+.++.....++++.++++..++.++.. ....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRAN-----------EWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhc-----------CChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 699999987643223456677777777765433 334679999999999999999999
Q ss_pred CEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChh
Q 000689 1241 EIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHS 1304 (1350)
Q Consensus 1241 ~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~ 1304 (1350)
++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 37999999999999865 9999999999999998765
No 356
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=377.55 Aligned_cols=217 Identities=27% Similarity=0.515 Sum_probs=183.0
Q ss_pred EEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----CHHH
Q 000689 1083 VELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~----~l~~ 1156 (1350)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997431 13699999999999999999999999999999999999999999999999998764 4567
Q ss_pred hhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHHH----HHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1157 LRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++|+|+||+| .+|..|++||+.++.. ..+.++. .++++..++.+ ........+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHHH
Confidence 889999999998 6888999999986421 1233332 23333333321 1234455689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|++|||||+++|++|||||||++||+++.+.+.+.|++.. .|+|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999865 48999999999999865 999999999999999999998
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 754
No 357
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=372.14 Aligned_cols=224 Identities=27% Similarity=0.508 Sum_probs=191.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~l 1154 (1350)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 369999999999999999999999999999999999875 489999999999875 346
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|.+|++||+.++.. .. + ++.+.++++.+++.+++..+ ....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHH
Confidence 678999999999999999999999986521 11 1 23456667777776655421 3345668999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999876 899999999999999999999
Q ss_pred hhcCCCchhH
Q 000689 1307 LKNNPDGCYA 1316 (1350)
Q Consensus 1307 l~~~~~g~y~ 1316 (1350)
... +.+.|.
T Consensus 233 ~~~-~~~~~~ 241 (250)
T PRK14266 233 FIN-PKDKRT 241 (250)
T ss_pred HhC-CCChHH
Confidence 765 455544
No 358
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=366.21 Aligned_cols=207 Identities=27% Similarity=0.466 Sum_probs=173.4
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++|+|++ .++|+|+||++++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999964 36999999999999 99999999999999999999999999999999999987766 66788999
Q ss_pred EEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.+|.. |++||+.+... ..+.++..+. +.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 148 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKAR-----VDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGD 148 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHH-----HHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999876 99999987421 1111111111 11222222 333334455678999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 149 PSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999998777999999999999865 9999999999998765
No 359
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=372.46 Aligned_cols=218 Identities=29% Similarity=0.476 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~--~l 1154 (1350)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 3699999999999999999999999999999999999875 799999999998653 44
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||++.+|..|++||+.++.. .. + .+++.++++.+++.+.+.. ........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 577889999999999999999999986521 11 1 2334566666666433322 23345678999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999866 999999999999999999999
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
+..
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 765
No 360
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=374.48 Aligned_cols=220 Identities=31% Similarity=0.497 Sum_probs=186.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 69999999999742 23599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEccCCC-cc-cccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc
Q 000689 507 GLVSQEPA-LF-ATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML 582 (1350)
Q Consensus 507 ~~v~Q~~~-lf-~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~ 582 (1350)
+||+|+|. +| ..|+++|+.++... ...++..+. +.+.+..+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRR-----VSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHH-----HHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 56899999886432 122222111 11222322 4444455677899999999999999999
Q ss_pred CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 583 KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 583 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999988753 7999999999999888999999999999999999998654
No 361
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=374.75 Aligned_cols=221 Identities=31% Similarity=0.522 Sum_probs=186.7
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS-- 496 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~-- 496 (1350)
..+.|+++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++..
T Consensus 22 ~~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~ 98 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKK 98 (272)
T ss_pred CCcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccc
Confidence 3457999999999963 3599999999999999999999999999999999999984 89999999999864
Q ss_pred CCHHHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCCh
Q 000689 497 LKLRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSG 569 (1350)
Q Consensus 497 ~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 569 (1350)
.+..++|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+ .+.+..+..+.+|||
T Consensus 99 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~ 171 (272)
T PRK14236 99 VDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSG 171 (272)
T ss_pred cCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCH
Confidence 3456778899999999999988999999876321 1 11 11233333332222 222456777889999
Q ss_pred HHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 000689 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTH 648 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~ 648 (1350)
|||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 172 Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 251 (272)
T PRK14236 172 GQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDT 251 (272)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCH
Confidence 9999999999999999999999999999999999999999998778999999999999865 999999999999999999
Q ss_pred HHHHhc
Q 000689 649 DELIAK 654 (1350)
Q Consensus 649 ~~l~~~ 654 (1350)
+++...
T Consensus 252 ~~~~~~ 257 (272)
T PRK14236 252 DTLFTS 257 (272)
T ss_pred HHHhcC
Confidence 998754
No 362
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-40 Score=377.00 Aligned_cols=221 Identities=30% Similarity=0.536 Sum_probs=187.9
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC---cEEEECCeeCCCCCHHHH
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS---GQVLLDGHDIKSLKLRWL 502 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~i~g~~~~~~~~~~~ 502 (1350)
++|+++|++|+|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 479999999999642 2369999999999999999999999999999999999999998 899999999987777778
Q ss_pred hccEEEEccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 503 RQQIGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 r~~i~~v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
++++|||+|+|. +++.|+.|||.++... .+.++..+. +.+.+..+ |+.........+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKI-----VRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5678999999886432 223222111 12223333 555556677789999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999988753 8999999999999988999999999999999999988754
No 363
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=372.97 Aligned_cols=220 Identities=30% Similarity=0.471 Sum_probs=186.0
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
...|+++|++|+|++ +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 18 ~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 347999999999963 469999999999999999999999999999999999997 589999999999864 3
Q ss_pred CHHHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChH
Q 000689 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGG 570 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgG 570 (1350)
+...+|+.|+||+|++.+|..|++||+.++... . ..++ +.++++..++.+ +.++..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCHH
Confidence 455678899999999999989999999886321 1 1111 222222322221 2234567788899999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000689 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 98764
No 364
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-40 Score=369.91 Aligned_cols=222 Identities=29% Similarity=0.460 Sum_probs=187.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4899999999974 36999999999999999999999999999999999999999999999999988776654 4567
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCC-H-HH---HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDAD-L-NE---IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~-~-~~---~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
++|++|++.+|.+ |++||+.++..... . .. .........+.+.+..+ |++........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999986 99999988642100 0 00 00001112234455555 6666677788899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|++.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999998778999999999999976 99999999999999999998864
No 365
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.8e-40 Score=382.24 Aligned_cols=217 Identities=31% Similarity=0.491 Sum_probs=182.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 5899999999963 3599999999999999999999999999999999999999999999999998654 35568899
Q ss_pred EEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||+|++.++. .|++||+.+... ..+..+..+.+ .+.+..+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 599999975321 12222222211 1222222 44444555667899999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999874 58999999999999975 999999999999999999998754
No 366
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=378.88 Aligned_cols=218 Identities=28% Similarity=0.516 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----CHH
Q 000689 1082 EVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~----~l~ 1155 (1350)
.|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 346
Q ss_pred HhhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1156 SLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..|+.++|+||+| .+|..|++|||.++.. ..+.++ +.++++..++.. ........+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHH
Confidence 6788999999998 5788899999986421 223332 333344444421 123344568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999875 58999999999999865 99999999999999999999
Q ss_pred Hhhc
Q 000689 1306 LLKN 1309 (1350)
Q Consensus 1306 Ll~~ 1309 (1350)
++..
T Consensus 232 ~~~~ 235 (287)
T PRK13641 232 IFSD 235 (287)
T ss_pred HhcC
Confidence 8753
No 367
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=379.92 Aligned_cols=220 Identities=29% Similarity=0.505 Sum_probs=182.9
Q ss_pred CCcEEEEEEEEECCCCC--CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC----C-
Q 000689 1080 RGEVELKHVDFSYPSRP--DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK----Y- 1152 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~--~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~----~- 1152 (1350)
.+.|+++|++++|+.++ ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997532 1359999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHhhcccEEEccCC--ccCcccHHHHhccCCC--CCCHHHHH----HHHHHhccHHHHhcCCCCccccccCCCCCCCh
Q 000689 1153 NLKSLRRHMAIVPQEP--CLFASTIYENIAYGHE--SATESEII----EAARLANADKFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1153 ~l~~lR~~i~~VpQdp--~LF~gTIreNL~~~~~--~~td~ei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
+...+|++++|+||+| .+|..|++||+.++.. ....++.. +.++..++ |++ .......+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~~---~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PED---YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Chh---HhcCChhhCCH
Confidence 4567888999999998 4778899999986532 12333322 22222222 211 23345568999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999875 38999999999998855 9999999999999999
Q ss_pred ChhHHhhc
Q 000689 1302 SHSHLLKN 1309 (1350)
Q Consensus 1302 t~~eLl~~ 1309 (1350)
++++++..
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99998754
No 368
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-40 Score=362.71 Aligned_cols=199 Identities=34% Similarity=0.575 Sum_probs=168.9
Q ss_pred EEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEE
Q 000689 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 369999999999999999999999999999999999999999999999998754 456778999
Q ss_pred EccCC--CcccccHHHHhhcCCCCCC--HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 509 VSQEP--ALFATTIKENILLGRPDAD--LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 509 v~Q~~--~lf~~ti~eNi~~g~~~~~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|++ .++..|++||+.++.+... .+++.++++.. |++........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDL-----------DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHc-----------CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4677899999988643222 12333333333 444445556678999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHh-cCCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRF-MIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVS 643 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~ 643 (1350)
|++|||||||++||+.+.+.+.+.|+++ .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999887 458999999999999875 9999999999975
No 369
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-40 Score=378.00 Aligned_cols=220 Identities=31% Similarity=0.525 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCCC--CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHH
Q 000689 428 IELKHVDFSYPSRP--EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~--~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~ 501 (1350)
|+++||+|+|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998754 3456
Q ss_pred HhccEEEEccCC--CcccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHHH
Q 000689 502 LRQQIGLVSQEP--ALFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 502 ~r~~i~~v~Q~~--~lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri~ 576 (1350)
+|+.|+|++|++ .+|+.|++||+.++.. ..+.++..+. +.+.+..+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 788999999998 6788899999987532 1223322221 12333333 554 3456778899999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|||||+.+|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 48999999999999865 999999999999999999988653
No 370
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=371.87 Aligned_cols=213 Identities=29% Similarity=0.476 Sum_probs=186.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999964 36999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEccCCcc-CcccHHHHhccCCCCC------CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCL-FASTIYENIAYGHESA------TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~L-F~gTIreNL~~~~~~~------td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+ +..|++||+.++.... .++.+.++++..++.++.. .....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAG-----------RDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998753211 1234566666666655433 2346799999999999999
Q ss_pred hc------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1236 FV------RKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1236 LL------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|+ .+|++|||||||++||+.+...+.+.|++.. +|+|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 48999999999999874 999999999999999999998
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 754
No 371
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=376.57 Aligned_cols=222 Identities=31% Similarity=0.498 Sum_probs=186.0
Q ss_pred ceEEEEEEEEECCCCC---CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-HHH
Q 000689 426 GLIELKHVDFSYPSRP---EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLK-LRW 501 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~---~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~-~~~ 501 (1350)
.+|+++|++|+|++.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.. ...
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 3699999999997421 246999999999999999999999999999999999999999999999999987643 355
Q ss_pred HhccEEEEccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHH
Q 000689 502 LRQQIGLVSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAI 577 (1350)
Q Consensus 502 ~r~~i~~v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~i 577 (1350)
+|+.+|||+|+|. ++..|+.||+.|+... .+..+..+. +.+.+..+ |+.........+||||||||++|
T Consensus 83 ~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~l 155 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRER-----VDESLKKV--GMYEYRRHAPHLLSGGQKQRVAI 155 (280)
T ss_pred HhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHH
Confidence 7889999999984 6667999999986321 122222111 12223333 55555566678999999999999
Q ss_pred HHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 578 ARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 578 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+..||++++|++|++++.|+++++..+
T Consensus 156 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 156 AGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999999884 38999999999999988999999999999999999998754
No 372
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.8e-40 Score=368.31 Aligned_cols=214 Identities=31% Similarity=0.485 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-HhccE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~i 506 (1350)
|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 478999999973 36999999999999999999999999999999999999999999999999998776654 46789
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|.. |++||+.++.......+ .+. ..+.+..+ ++++........+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999987643221111 010 01112221 12344456677899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999998753 7999999999999986 999999999999999999887
No 373
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-40 Score=372.48 Aligned_cols=217 Identities=29% Similarity=0.460 Sum_probs=184.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 4899999999963 3699999999999999999999999999999999999999999999999999888877888899
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC----C--HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA----D--LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~----~--~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
+|++|++.++.+ |+.||+.++.... . .++..+ .+.+.+..+ |++......+..||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNA-----RVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAM 151 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHH-----HHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHH
Confidence 999999988876 9999999863210 0 011100 111222222 4555556677899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|++.+|++|||||||++||+++.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999999998875 48999999999999865 99999999999999999988864
No 374
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-40 Score=371.68 Aligned_cols=219 Identities=27% Similarity=0.490 Sum_probs=185.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 6999999999963 369999999999999999999999999999999999986 489999999998853 345
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCCC--C---HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA--D---LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~--~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 574 (1350)
..+|++++||+|++.+|+.|++||+.++.... . .+++.++++.+++.+++ +...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 67788999999999999889999998864311 1 12223333444433322 233566788999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEE
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ---------QGSVSE 644 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~~ 644 (1350)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999865 99999998 899999
Q ss_pred ecChHHHHhcc
Q 000689 645 IGTHDELIAKG 655 (1350)
Q Consensus 645 ~g~~~~l~~~~ 655 (1350)
.|+++|+...+
T Consensus 240 ~~~~~~~~~~~ 250 (264)
T PRK14243 240 FDRTEKIFNSP 250 (264)
T ss_pred eCCHHHHHhCC
Confidence 99999997653
No 375
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=376.57 Aligned_cols=213 Identities=30% Similarity=0.490 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC--CCCHHHhhcc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR--KYNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~--~~~l~~lR~~ 1160 (1350)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 36999999999999999999999999999999999999999999999999985 3345678889
Q ss_pred cEEEccCCc--cCcccHHHHhccCCC--CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEPC--LFASTIYENIAYGHE--SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~--LF~gTIreNL~~~~~--~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
++||||+|. +|..|+.+|+.++.. ..+.+ ++.++++..++.++.. ....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-----------QPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-----------CCchhCCHHHHHHHHH
Confidence 999999985 577899999976421 12222 3445566666654432 2346799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||||+.+|+||||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999864 58999999999999965 999999999999999999998764
No 376
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-40 Score=369.93 Aligned_cols=217 Identities=25% Similarity=0.436 Sum_probs=186.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
+|+++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 5899999999963 36999999999999999999999999999999999999999999999999998776543 5778
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCC---CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPD---ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
++|++|++.+|.. |++||+.++... .+.++. ...+.+.+..+ |++........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 111111 12234555555 676667778889999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+.+|++|||||||++||+.+.+.+.+.++++. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998875 48999999999988765 99999999999999999998864
No 377
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.8e-40 Score=365.77 Aligned_cols=201 Identities=37% Similarity=0.604 Sum_probs=175.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH---Hhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK---SLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~---~lR~ 1159 (1350)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 23699999999999999999999999999999999999999999999999999877643 4688
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCC------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
+++|+||+|.+|. .|++||+.++.. ...+++++++++..++.++....| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999886 699999986421 112345677777777766554433 4799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCe
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGK 1296 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~Gr 1296 (1350)
||||+++|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999864 58999999999999986 99999999985
No 378
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=373.92 Aligned_cols=218 Identities=25% Similarity=0.435 Sum_probs=186.7
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCCCC-HH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRKYN-LK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~~~-l~ 1155 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999964 3699999999999999999999999999999999999986 6999999999987763 45
Q ss_pred HhhcccEEEccCCccCcccHHHHhccCCC---CCCHHHHH----HHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE---SATESEII----EAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~---~~td~ei~----~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|++++|+||+|.+|..|+++|+.++.. ..+++++. +.++..++.+ .+++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWD-------AVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCc-------hhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999986531 13444432 2333333322 2223445667789999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987767899999999999866 9999999999999999999998
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 65
No 379
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.5e-40 Score=362.84 Aligned_cols=203 Identities=31% Similarity=0.504 Sum_probs=174.0
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++... ..++++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 478999999963 3699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+|. .|++||+.++.. ..+.+++.++++.. |++......+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVV-----------GLKDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHc-----------CCHHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998884 699999987532 12233344444443 344444556778999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 48999999999999875 9999999999998765
No 380
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.3e-40 Score=374.00 Aligned_cols=217 Identities=29% Similarity=0.466 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCC------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH
Q 000689 1083 VELKHVDFSYPSR------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~ 1156 (1350)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 1346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---hhcccEEEccCCc--cC-cccHHHHhccCCC---CC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1157 ---LRRHMAIVPQEPC--LF-ASTIYENIAYGHE---SA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1157 ---lR~~i~~VpQdp~--LF-~gTIreNL~~~~~---~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
+|++++|+||+|. ++ ..|++||+.++.. .. .++++.++++..++.+ ......+..||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhCC
Confidence 6788999999983 44 4699999964311 11 1233444455544421 12344556899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEe
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~ 1300 (1350)
||||||++|||||+.+|+||||||||++||+++...+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998753 8999999999999975 999999999999999
Q ss_pred cChhHHhhc
Q 000689 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|++++++..
T Consensus 233 g~~~~~~~~ 241 (265)
T TIGR02769 233 CDVAQLLSF 241 (265)
T ss_pred CCHHHHcCC
Confidence 999999864
No 381
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=369.15 Aligned_cols=211 Identities=36% Similarity=0.611 Sum_probs=184.7
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 578999999964 369999999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCCccCcc-cHHHHhccCCC------CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE------SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~------~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |+++|+.++.. ...++++.++++..++.+++...| .+||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 99999986421 112345666677777766655443 5799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+++|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999865 999999999999999999999765
No 382
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=370.76 Aligned_cols=213 Identities=28% Similarity=0.479 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCC------CCCHHH
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIR------KYNLKS 1156 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~------~~~l~~ 1156 (1350)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999964 36999999999999999999999999999999999999999999999999873 123467
Q ss_pred hhcccEEEccCCccCcc-cHHHHhccCC---CCCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1157 LRRHMAIVPQEPCLFAS-TIYENIAYGH---ESATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1157 lR~~i~~VpQdp~LF~g-TIreNL~~~~---~~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
+|++++|+||+|.+|.+ |++||+.++. ..... +++.+.++..++.++ ......+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPY-----------ADRFPLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 78899999999999875 9999997421 11222 223344444444433 34445689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
|++||||++++|+||||||||++||+++...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999875 48999999999999965 999999999999999999987
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
.+.
T Consensus 229 ~~~ 231 (242)
T PRK11124 229 TQP 231 (242)
T ss_pred cCc
Confidence 643
No 383
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.1e-40 Score=373.63 Aligned_cols=229 Identities=25% Similarity=0.400 Sum_probs=190.9
Q ss_pred cEEEEEEEEECCCC------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHH
Q 000689 1082 EVELKHVDFSYPSR------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~ 1155 (1350)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HhhcccEEEccCCc--cCc-ccHHHHhccCC---CCC----CHHHHHHHHHHhccH-HHHhcCCCCccccccCCCCCCCh
Q 000689 1156 SLRRHMAIVPQEPC--LFA-STIYENIAYGH---ESA----TESEIIEAARLANAD-KFISSLPDGYKTFVGERGVQLSG 1224 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~--LF~-gTIreNL~~~~---~~~----td~ei~~al~~a~l~-~~I~~lp~Gldt~vge~G~~LSg 1224 (1350)
..|++++|+||+|. ++. -|+.+|+.+.. ... .++++.++++..++. +... ....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-----------YYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-----------cCchhcCH
Confidence 66788999999985 444 38889886421 111 124566777777773 3322 22357999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 38899999999999987 9999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHH
Q 000689 1302 SHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1302 t~~eLl~~~~~g~y~~l~~~ 1321 (1350)
+++++........+++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~ 252 (267)
T PRK15112 233 STADVLASPLHELTKRLIAG 252 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHh
Confidence 99999876334556677764
No 384
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-40 Score=383.78 Aligned_cols=217 Identities=31% Similarity=0.500 Sum_probs=182.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ ..+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.++|.++.... ...|+.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 6999999999973 35999999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
|||||++.++. .|++||+.+... ..+..+..+.+ .+.+..+ |+.........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999874 599999985321 12222222211 1222222 34434455566899999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|+++..|+.+++...
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 48999999999999975 999999999999999999998754
No 385
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=375.07 Aligned_cols=218 Identities=28% Similarity=0.410 Sum_probs=181.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC--CCCHHHHhc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK--SLKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~--~~~~~~~r~ 504 (1350)
+|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. ..+...+|+
T Consensus 1 ml~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 77 (271)
T PRK13638 1 MLATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQ 77 (271)
T ss_pred CeEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHh
Confidence 4789999999963 35999999999999999999999999999999999999999999999999985 334456788
Q ss_pred cEEEEccCCC--cccccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 505 QIGLVSQEPA--LFATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~~--lf~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+|+||+|++. ++..|+.+|+.++.. ..+.++..+. +.+.+..+ |++........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~lara 150 (271)
T PRK13638 78 QVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGA 150 (271)
T ss_pred heEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHH
Confidence 9999999985 567799999987521 1222222111 12223332 44444455678999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 151 LVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999875 58999999999999865 999999999999999999888654
No 386
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=373.98 Aligned_cols=213 Identities=31% Similarity=0.485 Sum_probs=183.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 6999999999963 3699999999999999999999999999999999999999999999999999888888888899
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC-------C---HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA-------D---LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~-------~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
+|++|++.++.. |+.||+.++.... . .+++.++++.. |++........+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV-----------GLKPLAHRLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc-----------CCHHHhcCCcccCCHHHHHHH
Confidence 999999877655 9999999863211 0 11222333333 444445556678999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
+|||||+.+|++|||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 38999999999999865 9999999999999999998876
Q ss_pred h
Q 000689 653 A 653 (1350)
Q Consensus 653 ~ 653 (1350)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 4
No 387
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-40 Score=367.25 Aligned_cols=214 Identities=37% Similarity=0.561 Sum_probs=176.5
Q ss_pred eEEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHH
Q 000689 427 LIELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~ 502 (1350)
.|+++||+++|+++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 378999999996431 1269999999999999999999999999999999999999999999999999987763 567
Q ss_pred hccEEEEccCC--Ccc-cccHHHHhhcCCCCC---CHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHH
Q 000689 503 RQQIGLVSQEP--ALF-ATTIKENILLGRPDA---DLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 503 r~~i~~v~Q~~--~lf-~~ti~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri 575 (1350)
|++++|++|++ .++ ..|++||+.++.... ..++..+.+ +.+.+..+ |+. ........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 88999999999 344 469999998642111 111111100 12334444 553 456777889999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEec
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g 646 (1350)
+|||||+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998853 899999999999987 49999999999998765
No 388
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-40 Score=372.83 Aligned_cols=218 Identities=28% Similarity=0.491 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~l 1154 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999853 455
Q ss_pred HHhhcccEEEccCCccCc-ccHHHHhccCCC--C-CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1155 KSLRRHMAIVPQEPCLFA-STIYENIAYGHE--S-AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~--~-~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
..+|+.++|++|++.+|. .|++||+.++.. . .+ ++.+.++++..++.+.+. ........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHH
Confidence 678899999999999887 599999976421 1 11 233455666666643322 22344556899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe------CCeEEE
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID------DGKVAE 1299 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~------~GrIvE 1299 (1350)
|||++||||++.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988778999999999999865 99999997 899999
Q ss_pred ecChhHHhhc
Q 000689 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999865
No 389
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.6e-40 Score=365.82 Aligned_cols=198 Identities=29% Similarity=0.522 Sum_probs=170.3
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEE
Q 000689 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~ 1163 (1350)
+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999964 36999999999999999999999999999999999999999999999998874 46889999
Q ss_pred EccCCcc---CcccHHHHhccCCCC----------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1164 VPQEPCL---FASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1164 VpQdp~L---F~gTIreNL~~~~~~----------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
|||+|.+ |..|++||+.++... ..++++.++++..++.++... ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999976 568999999875321 112356667777777655443 3357999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
+|||||+.+|++|||||||++||+++.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999865 68999999999999966 9999999986 66654
No 390
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.3e-40 Score=362.26 Aligned_cols=210 Identities=29% Similarity=0.468 Sum_probs=187.7
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH----HHhhc
Q 000689 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL----KSLRR 1159 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l----~~lR~ 1159 (1350)
.+.|+.|+|+.+ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567999999744 469999999999999999999999999999999999999999999999999876542 34577
Q ss_pred ccEEEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1160 HMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
.++|++|+|.+|+.|++|||.++.+ ..+++..++++..++.+++..+|.|+++.++....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998643 456667788888999999999999999999988999999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHH--HHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCe
Q 000689 1240 AEIMLLDEATSALDAESERSVQE--ALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGK 1296 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~--~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~Gr 1296 (1350)
|+||||||||++||+.+...+.+ .++... .|.|+|++||+++.+..||+|++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 455443 4789999999999998899999999984
No 391
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=369.47 Aligned_cols=219 Identities=30% Similarity=0.493 Sum_probs=184.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--C
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +
T Consensus 3 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 79 (251)
T PRK14270 3 IKMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVD 79 (251)
T ss_pred cEEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccccc
Confidence 36899999999963 3599999999999999999999999999999999999875 799999999998643 3
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCCC---CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|+.++|++|++.+|+.|++||+.++.... +.+ ++.++++.+++. +++.......+..|||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~G~ 152 (251)
T PRK14270 80 VVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALW-------DEVKDDLKKSALKLSGGQ 152 (251)
T ss_pred HHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCc-------hhhhhHhhCCcccCCHHH
Confidence 456788899999999999999999998763211 111 122233333221 122334566788999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 153 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 153 QQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999876 99999999999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 8765
No 392
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-40 Score=342.85 Aligned_cols=220 Identities=31% Similarity=0.485 Sum_probs=192.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~~ 505 (1350)
+++++|++-.|+. .++|++|||++++||+++|+|+||+|||||++.|+|+.+|.+|+|.++|+|++..+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 5899999999973 46999999999999999999999999999999999999999999999999999998765 5778
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|+||||.-.+|+. ||+||+.+|......++.. ....++...-+| -+....+.++.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999976 9999999884322211111 111233445566 366778889999999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++|+|||||.+|-|.-.+.|.+.|+++.+ |.||++|-++...... |||.+||++|+|+.+|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999974 6799999999998765 999999999999999999999875
No 393
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.7e-40 Score=364.54 Aligned_cols=202 Identities=31% Similarity=0.531 Sum_probs=173.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHhhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~lR~ 1159 (1350)
|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999643 369999999999999999999999999999999999999999999999999987754 35788
Q ss_pred ccEEEccCCccCc-ccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCLFA-STIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~-gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
.++||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.+..... ..+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRAL-----------PAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHH
Confidence 9999999999987 499999986521 112 23456666666665544333 35799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeE
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrI 1297 (1350)
||||+++|+||||||||++||+.+.+.+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 58999999999999976 999999999975
No 394
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=372.65 Aligned_cols=218 Identities=30% Similarity=0.529 Sum_probs=181.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCCC--HH
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSLK--LR 500 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~~--~~ 500 (1350)
-+++|++|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 478999999963 369999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhccEEEEccCCCcccccHHHHhhcCCC--CC--CHHHHHHHHHHhchHHHHhcCCCCc----cchhcCCCCCCChHHH
Q 000689 501 WLRQQIGLVSQEPALFATTIKENILLGRP--DA--DLNEIEEAARVANAYSFIIKLPDGF----DTQVRERGVQLSGGQK 572 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~--~~~~~~~~~~~~~~~~~i~~lp~g~----~t~~~~~g~~LSgGqk 572 (1350)
.+|+.++||+|++.+|+.|++||+.++.. .. ..++..+ .+.+.+..+ |+ .+.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 57889999999999998999999987621 11 1111111 111222222 33 2345667889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999999
Q ss_pred Hhcc
Q 000689 652 IAKG 655 (1350)
Q Consensus 652 ~~~~ 655 (1350)
...+
T Consensus 236 ~~~~ 239 (251)
T PRK14244 236 FKNP 239 (251)
T ss_pred hcCC
Confidence 8653
No 395
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=370.40 Aligned_cols=218 Identities=27% Similarity=0.510 Sum_probs=184.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 6999999999963 3599999999999999999999999999999999999763 489999999998765 45
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCCC---CHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA---DLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~---~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
...|+.++|++|++.+|+.|++||+.++.... ...+ +.++++..+ +.+++.+..++.+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAA-------LWDEVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhc-------CchhhHHHhhcChhhCCHHHH
Confidence 56788899999999999899999999864211 1111 222222222 222334556778889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999965 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 236 ~~~ 238 (253)
T PRK14261 236 FEN 238 (253)
T ss_pred HhC
Confidence 765
No 396
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-40 Score=364.04 Aligned_cols=201 Identities=41% Similarity=0.681 Sum_probs=172.6
Q ss_pred EEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEE
Q 000689 1084 ELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAI 1163 (1350)
Q Consensus 1084 ~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~ 1163 (1350)
+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 1469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EccCC--ccCcccHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1164 VPQEP--CLFASTIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1164 VpQdp--~LF~gTIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
+||+| .++..|++||+.++.. ..+ ++++.+.++..++.+++. .....||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRD-----------RSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 122 223445555555554433 3446799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCe
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGK 1296 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~Gr 1296 (1350)
|+++|++|||||||++||+.+...+.+.|++.. +|+|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999999875 48999999999999987 99999999985
No 397
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=373.17 Aligned_cols=215 Identities=27% Similarity=0.456 Sum_probs=188.6
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcc
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRH 1160 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~ 1160 (1350)
-.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999974 369999999999999999999999999999999999999999999999999988888888899
Q ss_pred cEEEccCCccCc-ccHHHHhccCC-CC---------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1161 MAIVPQEPCLFA-STIYENIAYGH-ES---------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~-~~---------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
++|+||++.+|. .|++||+.++. +. ..++.+.++++..++.++.. ....+||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLAD-----------QSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCChHHHHH
Confidence 999999998875 69999998652 10 11234666777777765543 3446799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
++||||++++|++|||||||++||+.+...+.+.|++..+ |+|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998865 999999999999999999998
Q ss_pred hhc
Q 000689 1307 LKN 1309 (1350)
Q Consensus 1307 l~~ 1309 (1350)
...
T Consensus 232 ~~~ 234 (265)
T PRK10253 232 VTA 234 (265)
T ss_pred hhH
Confidence 743
No 398
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=370.26 Aligned_cols=218 Identities=23% Similarity=0.459 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~ 1160 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 36999999999999999999999999999999999999999999999999998877644 5788
Q ss_pred cEEEccCCccCcc-cHHHHhccCCC---CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000689 1161 MAIVPQEPCLFAS-TIYENIAYGHE---SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~---~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1236 (1350)
++|+||++.+|.. |++||+.++.. ..+.++.. ..+.++++.+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998874 99999986531 12222211 1223444444 454445556678999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1237 Lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+++|++|||||||++||+.+...+.+.+++.. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998765 48999999999988755 999999999999999999998753
No 399
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-40 Score=372.60 Aligned_cols=219 Identities=29% Similarity=0.514 Sum_probs=188.1
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~iDG~di~~--~~ 1153 (1350)
+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999964 25999999999999999999999999999999999999985 8999999999853 35
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
...+|+.++|+||++.+|..|++||+.++.. .. + ++.+.++++..++.+++.. ..+..+..|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHH
Confidence 5678899999999999999999999986421 11 2 2335666777776554432 2345567899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeC-----CeEE
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDD-----GKVA 1298 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~-----GrIv 1298 (1350)
|||++|||||+++|+||||||||++||+++...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999853 48999999999999865 999999999 9999
Q ss_pred EecChhHHhhc
Q 000689 1299 ELGSHSHLLKN 1309 (1350)
Q Consensus 1299 E~Gt~~eLl~~ 1309 (1350)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999865
No 400
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.9e-40 Score=367.42 Aligned_cols=211 Identities=31% Similarity=0.526 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+. .++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999976653 478899
Q ss_pred EEccCCccCcc-cHHHHhccCCCC--CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHES--AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~--~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |++||+.++... .+ ++++.++++..++.++..+ ...+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDR-----------YPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------ChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999865321 11 2345555666665544433 335799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++++|+++||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998654 7999999999999866 999999999999999999999754
No 401
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.2e-40 Score=351.45 Aligned_cols=178 Identities=37% Similarity=0.647 Sum_probs=165.2
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++|+|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999988766 566788999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+ +.+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 468999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~g 646 (1350)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998764
No 402
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=372.76 Aligned_cols=220 Identities=29% Similarity=0.493 Sum_probs=186.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCC-HH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSLK-LR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~~-~~ 500 (1350)
.++++||+|+|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 6899999999973 3699999999999999999999999999999999999986 6999999999987653 34
Q ss_pred HHhccEEEEccCCCcccccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhc--CCCCccchhcCCCCCCChHHHHHH
Q 000689 501 WLRQQIGLVSQEPALFATTIKENILLGRP---DADLNEIEEAARVANAYSFIIK--LPDGFDTQVRERGVQLSGGQKQRI 575 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~--lp~g~~t~~~~~g~~LSgGqkqri 575 (1350)
.+|++++|++|++.+|+.|++||+.++.. ..+.++..+.+ .+.+.. +++.+.+.....+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999987632 12333332211 112222 222233456677889999999999
Q ss_pred HHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 576 AIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 576 ~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988767899999999999875 999999999999999999999865
No 403
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-40 Score=369.16 Aligned_cols=218 Identities=32% Similarity=0.515 Sum_probs=182.4
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~~~ 499 (1350)
.|+++|++|+|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 5899999999963 369999999999999999999999999999999999997 479999999999854 344
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+|+.++|++|++.+|+.|++||+.++... . ..+ ++.++++..+++. .........+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWK-------ETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCc-------chHHHhccChhhCCHHHH
Confidence 5678889999999999999999999876321 1 111 1222222222210 112234567789999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 765
No 404
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-40 Score=370.43 Aligned_cols=218 Identities=28% Similarity=0.493 Sum_probs=187.2
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC-CCCHH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR-KYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~-~~~l~ 1155 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 3699999999999999999999999999999999999986 5999999999985 45667
Q ss_pred HhhcccEEEccCCccCcccHHHHhccCCC--CCC-----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHH
Q 000689 1156 SLRRHMAIVPQEPCLFASTIYENIAYGHE--SAT-----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQ 1228 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~t-----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQ 1228 (1350)
.+|+.++|+||+|.+|..|++||+.++.. ... ++++.++++.+++.+.+. ........+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHH
Confidence 88999999999999999999999986531 111 123445555666544332 2334456689999999
Q ss_pred HHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1229 RVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1229 rlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999987
Q ss_pred hc
Q 000689 1308 KN 1309 (1350)
Q Consensus 1308 ~~ 1309 (1350)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 405
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.5e-40 Score=363.20 Aligned_cols=207 Identities=32% Similarity=0.571 Sum_probs=174.9
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 478999999974 3599999999999999999999999999999999999999999999999998765443 46799
Q ss_pred EEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 5999999876321 12222211 112333333 566666777789999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|+++||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999875 38999999999999876 9999999999999876
No 406
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.5e-40 Score=380.53 Aligned_cols=213 Identities=26% Similarity=0.414 Sum_probs=180.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3699999999999999999999999999999999999999999999999998754 35678999
Q ss_pred EEEccCCccCc-ccHHHHhccCC--CCCCHHHH----HHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFA-STIYENIAYGH--ESATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~-gTIreNL~~~~--~~~td~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+|+||++.+|. .|++||+.+.. ...+..+. .++++..++ ++.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l-------~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-------hhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999998885 69999997421 11233332 233333333 22334433 569999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||+++|++|||||||++||+.+...+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999864 58999999999999975 999999999999999999999754
No 407
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=370.83 Aligned_cols=223 Identities=27% Similarity=0.462 Sum_probs=187.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~ 505 (1350)
.++++|++++|++ .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ +..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 6999999999963 369999999999999999999999999999999999999999999999999987775543 556
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCCCH----------HHH--HHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDADL----------NEI--EEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
++|++|++.+|.. |++||+.++...... ... ........+.+.+..+ |++......+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999976 999999986321100 000 0001111234455555 777778888999999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|.++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 999999999999999999999999999999999999998753 7899999999999866 9999999999999999998
Q ss_pred HHHhc
Q 000689 650 ELIAK 654 (1350)
Q Consensus 650 ~l~~~ 654 (1350)
++...
T Consensus 240 ~~~~~ 244 (255)
T PRK11300 240 EIRNN 244 (255)
T ss_pred HHhhC
Confidence 87643
No 408
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-40 Score=372.31 Aligned_cols=220 Identities=28% Similarity=0.495 Sum_probs=189.8
Q ss_pred CCcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCC----
Q 000689 1080 RGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIR---- 1150 (1350)
Q Consensus 1080 ~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~---- 1150 (1350)
.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 467999999999964 3699999999999999999999999999999999999875 7999999998874
Q ss_pred CCCHHHhhcccEEEccCCccCcccHHHHhccCCC--C-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1151 KYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE--S-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1151 ~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
..+...+|++++|+||+|.+|.+|++||+.++.. . ..++++.++++.+++.+.+ ....+.....||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEV-------KDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhh-------hHHHhCCcccCC
Confidence 3345678899999999999999999999986521 1 1234566677766664322 233455567899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecC
Q 000689 1224 GGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1224 gGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt 1302 (1350)
||||||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988778999999999999965 99999999999999999
Q ss_pred hhHHhhc
Q 000689 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
++++...
T Consensus 244 ~~~~~~~ 250 (265)
T PRK14252 244 TDTIFIK 250 (265)
T ss_pred HHHHHhC
Confidence 9999765
No 409
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-40 Score=376.08 Aligned_cols=225 Identities=28% Similarity=0.478 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCCC--CH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRKY--NL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~~--~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999964 359999999999999999999999999999999999864 4999999999998643 33
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++||||+|.+|..|++|||.++.. .. + ++++.++++..++.+.+. .........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS-------DRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh-------hHhhCChhhCCHHHH
Confidence 467889999999999998999999987521 11 1 223455566655533221 122345567999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999999999
Q ss_pred hhcCCCchhHH
Q 000689 1307 LKNNPDGCYAR 1317 (1350)
Q Consensus 1307 l~~~~~g~y~~ 1317 (1350)
.++ +...|.+
T Consensus 269 ~~~-~~~~~~~ 278 (286)
T PRK14275 269 FTN-PKDRMTE 278 (286)
T ss_pred HhC-CCcHHHH
Confidence 875 3444444
No 410
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.1e-40 Score=371.92 Aligned_cols=212 Identities=25% Similarity=0.418 Sum_probs=185.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++...+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999964 36999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEccCCc-cCcccHHHHhccCCCC----------CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHH
Q 000689 1163 IVPQEPC-LFASTIYENIAYGHES----------ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVA 1231 (1350)
Q Consensus 1163 ~VpQdp~-LF~gTIreNL~~~~~~----------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrla 1231 (1350)
|+||+|. .+..|++||+.++... ..++++.++++..++.+... .....||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLAD-----------RDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHHHHHHHH
Confidence 9999995 4568999999875310 11224566666666654432 344679999999999
Q ss_pred HHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHHhh
Q 000689 1232 IARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1232 iARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eLl~ 1308 (1350)
||||++.+|+++||||||++||+.+...+.+.|++.. +|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 4789999999999995 499999999999999999998864
No 411
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-40 Score=369.52 Aligned_cols=217 Identities=28% Similarity=0.450 Sum_probs=184.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 5899999999974 3599999999999999999999999999999999999999999999999999888777788899
Q ss_pred EEEccCCCc-ccccHHHHhhcCCCCC--CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhc-
Q 000689 507 GLVSQEPAL-FATTIKENILLGRPDA--DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAML- 582 (1350)
Q Consensus 507 ~~v~Q~~~l-f~~ti~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~- 582 (1350)
+|++|++.+ +..|++||+.++.... +.++..+ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 5679999998864211 1111111 112233333 5555566677899999999999999999
Q ss_pred -----CCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 583 -----KNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 583 -----~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999875 48999999999999875 99999999999999999988864
No 412
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.1e-40 Score=364.32 Aligned_cols=213 Identities=32% Similarity=0.499 Sum_probs=181.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 6999999999963 3599999999999999999999999999999999999999999999999999888887788899
Q ss_pred EEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+.|++||+.++.......... ..+.+.+..+ |+. +.....+.+||||||||++|||||+.+|
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-----AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-----HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999889999998742100000000 1122344444 553 4567788999999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEe-CCEEEEecChH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRKADVVAVLQ-QGSVSEIGTHD 649 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~~d~i~vl~-~G~i~~~g~~~ 649 (1350)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+..||+|++|+ ++..+++|+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999874 3889999999999998899999994 67777888885
No 413
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=368.39 Aligned_cols=204 Identities=31% Similarity=0.478 Sum_probs=175.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 35999999999999999999999999999999999999999999999998753 457789
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
+|++|++.+|+ .|++||+.++......+++. +.+..+ |++......+.+||||||||++|||||+.+|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAAL---------QALAAV--GLADRANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHH---------HHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 59999999864221122222 233333 5555566777899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998874 37999999999999865 9999999999999988754
No 414
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-40 Score=364.98 Aligned_cols=209 Identities=35% Similarity=0.497 Sum_probs=174.8
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
|+++|++++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997411 1469999999999999999999999999999999999999999999999998863 35789
Q ss_pred EEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+||+|++.+|. .|++||+.++... ...++.. ..+.+.+..+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999887 5999999875321 1111111 1123344444 56656667778999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQ--QGSVSEIGTH 648 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~--~G~i~~~g~~ 648 (1350)
+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999874 38999999999998865 99999999 7999998764
No 415
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-40 Score=369.90 Aligned_cols=218 Identities=29% Similarity=0.454 Sum_probs=190.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~l 1154 (1350)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999953 3699999999999999999999999999999999999986 79999999999864 344
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC-----CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE-----SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-----~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++++|+||+|.+|..|++|||.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987531 1123467778888877655432 2345667899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe--------CCeEEEe
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID--------DGKVAEL 1300 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~--------~GrIvE~ 1300 (1350)
++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999999865 99999996 8999999
Q ss_pred cChhHHhhc
Q 000689 1301 GSHSHLLKN 1309 (1350)
Q Consensus 1301 Gt~~eLl~~ 1309 (1350)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999865
No 416
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-40 Score=368.83 Aligned_cols=217 Identities=29% Similarity=0.495 Sum_probs=184.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCC------CCCHH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIK------SLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~------~~~~~ 500 (1350)
+|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .....
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 4889999999964 35999999999999999999999999999999999999999999999999873 12345
Q ss_pred HHhccEEEEccCCCcccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHH
Q 000689 501 WLRQQIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~ 576 (1350)
.+|++++|++|++.+|.. |++|||.++.. ....++.. ..+.+.+..+ |++........+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 678899999999999875 99999975311 11222211 1234455555 6776777788899999999999
Q ss_pred HHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 577 IARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 577 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
|||||+.+|++|||||||++||+++...+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999999875 48999999999999965 99999999999999999887653
No 417
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=373.76 Aligned_cols=219 Identities=32% Similarity=0.529 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--CCHHHHhc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS--LKLRWLRQ 504 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~--~~~~~~r~ 504 (1350)
+|+++||+++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++
T Consensus 1 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (275)
T PRK13639 1 ILETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRK 78 (275)
T ss_pred CEEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHh
Confidence 3789999999963 2359999999999999999999999999999999999999999999999999852 23456788
Q ss_pred cEEEEccCC--CcccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 505 QIGLVSQEP--ALFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 505 ~i~~v~Q~~--~lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
.|+|++|++ .+|..|+.|||.++... .+.++..+. +.+.+..+ |+.......+.+||||||||++||||
T Consensus 79 ~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~lara 151 (275)
T PRK13639 79 TVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKR-----VKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGI 151 (275)
T ss_pred heEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999997 57788999999876321 222222111 12233333 44444556678999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+.+|++|||||||++||+.+...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 152 LAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999875 48999999999999875 999999999999999999998753
No 418
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=375.20 Aligned_cols=214 Identities=32% Similarity=0.555 Sum_probs=183.2
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC--CCHHHhhcc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--YNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~--~~l~~lR~~ 1160 (1350)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2369999999999999999999999999999999999999999999999999852 234567899
Q ss_pred cEEEccCC--ccCcccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEP--CLFASTIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp--~LF~gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
|+|+||+| .+|..|++||+.++.. ..+. +++.++++..++.++.. ....+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-----------~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFEN-----------KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhc-----------CChhhCCHHHHHHHHH
Confidence 99999998 4788999999986431 1222 33455666666544322 2345799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|||++.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 48999999999999875 999999999999999999998754
No 419
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=367.85 Aligned_cols=218 Identities=29% Similarity=0.523 Sum_probs=184.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC-CCCHH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK-SLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~-~~~~~ 500 (1350)
.++++|++++|++ +++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 5899999999973 3599999999999999999999999999999999999986 5999999999985 34566
Q ss_pred HHhccEEEEccCCCcccccHHHHhhcCCCC--CC-HH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 501 WLRQQIGLVSQEPALFATTIKENILLGRPD--AD-LN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~~-~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
.+|+.++|++|++.+|..|++||+.++... .. .+ ++.++++..++. +++.+.....+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALW-------DEVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCc-------hhhhHHhhcCcccCCHHHHH
Confidence 788899999999999999999999876321 11 11 122222222222 22334556777899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999998886
Q ss_pred hc
Q 000689 653 AK 654 (1350)
Q Consensus 653 ~~ 654 (1350)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 420
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-40 Score=371.57 Aligned_cols=221 Identities=22% Similarity=0.428 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHh-hcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSL-RRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~l-R~~ 1160 (1350)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 369999999999999999999999999999999999999999999999999988876554 456
Q ss_pred cEEEccCCccCcc-cHHHHhccCCCCCCH--------------HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChh
Q 000689 1161 MAIVPQEPCLFAS-TIYENIAYGHESATE--------------SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGG 1225 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~td--------------~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgG 1225 (1350)
++|+||+|.+|.+ |++||+.++.....+ .+..+. ...+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 999999875311100 000000 11123344443 4555556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecC
Q 000689 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1226 QrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt 1302 (1350)
||||++||||++.+|+||||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999866 99999999999999999
Q ss_pred hhHHhhc
Q 000689 1303 HSHLLKN 1309 (1350)
Q Consensus 1303 ~~eLl~~ 1309 (1350)
++++...
T Consensus 238 ~~~~~~~ 244 (255)
T PRK11300 238 PEEIRNN 244 (255)
T ss_pred HHHHhhC
Confidence 9998643
No 421
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-40 Score=369.90 Aligned_cols=225 Identities=29% Similarity=0.506 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC-----ccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS-----SGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~-----~G~I~iDG~di~~--~~l 1154 (1350)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3789999999963 36999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHhhcccEEEccCCccCcc-cHHHHhccCCC--CC-CHHHHHHH----HHHhccHHHHhcCCCCccccccCCCCCCChhH
Q 000689 1155 KSLRRHMAIVPQEPCLFAS-TIYENIAYGHE--SA-TESEIIEA----ARLANADKFISSLPDGYKTFVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~~-td~ei~~a----l~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQ 1226 (1350)
..+|++++|+||+|.+|.. |++||+.++.. .. .+++..+. ++..++.+.+ ++.++. ...+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKT----PATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcC----CcccCCHHH
Confidence 5788999999999999884 99999986421 11 23333222 3333333222 223333 356799999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhH
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSH 1305 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~e 1305 (1350)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999986 99999999999999999999
Q ss_pred HhhcCCCchhHH
Q 000689 1306 LLKNNPDGCYAR 1317 (1350)
Q Consensus 1306 Ll~~~~~g~y~~ 1317 (1350)
++.. +...|.+
T Consensus 234 ~~~~-~~~~~~~ 244 (252)
T PRK14272 234 LFTN-PRDERTE 244 (252)
T ss_pred HHhC-cCcHHHH
Confidence 9876 4544543
No 422
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=371.83 Aligned_cols=220 Identities=30% Similarity=0.537 Sum_probs=183.5
Q ss_pred cceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000689 425 SGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKS--L 497 (1350)
Q Consensus 425 ~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~--~ 497 (1350)
...|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++.. .
T Consensus 37 ~~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~ 113 (285)
T PRK14254 37 ETVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADV 113 (285)
T ss_pred CceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEcccccc
Confidence 346999999999963 359999999999999999999999999999999999997 689999999999864 3
Q ss_pred CHHHHhccEEEEccCCCcccccHHHHhhcCCCC--CC---HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 498 KLRWLRQQIGLVSQEPALFATTIKENILLGRPD--AD---LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 498 ~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~~---~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
+...++++++||+|++.+|..|++||+.++... .. .+++.++++..++. ..+.....+++.+||||||
T Consensus 114 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LSgGe~ 186 (285)
T PRK14254 114 DPVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALW-------DEVKDQLDSSGLDLSGGQQ 186 (285)
T ss_pred chHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCC-------chhHHHHhCCcccCCHHHH
Confidence 455678899999999999988999999875321 11 11222233222221 1112345677889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEE-EEeCCEEEEecChHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVA-VLQQGSVSEIGTHDE 650 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~-vl~~G~i~~~g~~~~ 650 (1350)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+++ +|++|+|++.|++++
T Consensus 187 qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 187 QRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999998767899999999999876 99975 579999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+..+
T Consensus 267 ~~~~ 270 (285)
T PRK14254 267 IFEN 270 (285)
T ss_pred HHhC
Confidence 8765
No 423
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-40 Score=359.89 Aligned_cols=201 Identities=33% Similarity=0.540 Sum_probs=176.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999632 2 39999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEccCCccCcc-cHHHHhccCCC-C-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE-S-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~-~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |++||+.++.. . .+++++.++++..++.++....| .+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986532 1 12446777888888877665544 4799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
++++|++|||||||++||+++...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999966 9999999999999865
No 424
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=7.3e-40 Score=364.53 Aligned_cols=208 Identities=28% Similarity=0.436 Sum_probs=178.4
Q ss_pred cEEEEEEEEECCCCCC-CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---h
Q 000689 1082 EVELKHVDFSYPSRPD-IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---L 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~-~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---l 1157 (1350)
.|+++||+++|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999974321 25999999999999999999999999999999999999999999999999998877653 2
Q ss_pred -hcccEEEccCCccCcc-cHHHHhccCC--CCC----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1158 -RRHMAIVPQEPCLFAS-TIYENIAYGH--ESA----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1158 -R~~i~~VpQdp~LF~g-TIreNL~~~~--~~~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
+++++|+||+|.+|.. |++||+.++. ... ..+++.++++..++.++....| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3689999999998875 9999997531 111 1335666677777766554433 4799999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEeCCeEEEe
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~~GrIvE~ 1300 (1350)
++|||||+++|++|||||||++||+.+...+.+.|++.. .|+|||+|||+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999999999864 37899999999999988999999999999874
No 425
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.1e-40 Score=362.11 Aligned_cols=205 Identities=40% Similarity=0.655 Sum_probs=173.5
Q ss_pred EEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEE
Q 000689 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988777788889999
Q ss_pred EccCCC--cccccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 509 VSQEPA--LFATTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 509 v~Q~~~--lf~~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
++|++. ++..|++||+.++... .+..+..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999983 5678999999875321 12222111 122334444 565566677889999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGS 641 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~ 641 (1350)
|++|||||||++||+.+++.+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998875 48999999999999987 99999999985
No 426
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=363.58 Aligned_cols=209 Identities=34% Similarity=0.563 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++||+++|+.. + .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++
T Consensus 2 l~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHHL---P--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECCc---c--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 7899999999632 2 39999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEccCCccCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGH-ES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~-~~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |++||+.++. +. ..++++.++++..++.+++.+.| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12445778888888877766654 4699999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++++|++|||||||++||+++.+.+.+.|++..+ |+|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 8899999999999865 999999999999999999999854
No 427
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6e-40 Score=378.76 Aligned_cols=212 Identities=22% Similarity=0.424 Sum_probs=184.1
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++|++++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999976 4467889999
Q ss_pred EEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||+|.+|.+ |++|||.+... ... .+++.++++..++. ........+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLR-----------PEQHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCc-----------hHhcCchhhCCHHHHHHHHHHHH
Confidence 99999999876 99999975321 112 22344444444443 33444556899999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|+++|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999998778999999999999876 999999999999999999999764
No 428
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=368.22 Aligned_cols=221 Identities=32% Similarity=0.517 Sum_probs=182.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~--~~~ 499 (1350)
.++++|++|+|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 5899999999963 36999999999999999999999999999999999999874 8999999999864 344
Q ss_pred HHHhccEEEEccCCCcccc-cHHHHhhcCCCC--C-CHHHHHHHHHHhchHHHHhcC--CCCccchhcCCCCCCChHHHH
Q 000689 500 RWLRQQIGLVSQEPALFAT-TIKENILLGRPD--A-DLNEIEEAARVANAYSFIIKL--PDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--p~g~~t~~~~~g~~LSgGqkq 573 (1350)
..+|+.++|++|++.+|.. |+.||+.++... . ..++..+.+. +.+..+ ..++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5678899999999999875 999999875321 1 2222222211 111111 111222334567789999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELI 652 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~ 652 (1350)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999986 9999999999999999999998
Q ss_pred hcc
Q 000689 653 AKG 655 (1350)
Q Consensus 653 ~~~ 655 (1350)
..+
T Consensus 236 ~~~ 238 (252)
T PRK14272 236 TNP 238 (252)
T ss_pred hCc
Confidence 653
No 429
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-39 Score=363.26 Aligned_cols=212 Identities=33% Similarity=0.514 Sum_probs=173.6
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH---HHhh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL---KSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l---~~lR 1158 (1350)
|+++||+++|+.+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 1269999999999999999999999999999999999999999999999999988763 5788
Q ss_pred cccEEEccCC--ccC-cccHHHHhccCC----CCCCHHHHHHHHHHhccHHHHhcCCCCcc-ccccCCCCCCChhHHHHH
Q 000689 1159 RHMAIVPQEP--CLF-ASTIYENIAYGH----ESATESEIIEAARLANADKFISSLPDGYK-TFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1159 ~~i~~VpQdp--~LF-~gTIreNL~~~~----~~~td~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgGQrQrl 1230 (1350)
++++|+||+| .++ ..|+++|+.++. ....+++...++ ++++..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 579999997531 111111111110 1222222 332 234455678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhh-hcCEEEEEeCCeEEEec
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~G 1301 (1350)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998753 899999999999997 49999999999999875
No 430
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.2e-39 Score=370.61 Aligned_cols=232 Identities=26% Similarity=0.448 Sum_probs=187.2
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH
Q 000689 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR 500 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~ 500 (1350)
+|+++||+++|+.. .+.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 58999999999631 124699999999999999999999999999999999999999999999999998765556
Q ss_pred HHhccEEEEccCCC--cccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChHHHH
Q 000689 501 WLRQQIGLVSQEPA--LFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 501 ~~r~~i~~v~Q~~~--lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgGqkq 573 (1350)
..++.++||+|++. +++. |+.+|+.++.. .....+..+ .+.+.+..+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 66778999999985 4443 89999875321 111111111 112233333 442 2234456789999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|++|||||+.+|+||||||||++||+++.+.+.+.|.++. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999999875 38999999999999986 99999999999999999999
Q ss_pred HHhccCCcHHHHHHH
Q 000689 651 LIAKGENGVYAKLIR 665 (1350)
Q Consensus 651 l~~~~~~~~y~~l~~ 665 (1350)
+...+....+++++.
T Consensus 237 ~~~~~~~~~~~~~~~ 251 (267)
T PRK15112 237 VLASPLHELTKRLIA 251 (267)
T ss_pred HhcCCCCHHHHHHHH
Confidence 987644455666654
No 431
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=8.1e-40 Score=377.69 Aligned_cols=217 Identities=23% Similarity=0.408 Sum_probs=187.5
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|++ ..+|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+++
T Consensus 2 ~l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~i 77 (301)
T TIGR03522 2 SIRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNI 77 (301)
T ss_pred EEEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhce
Confidence 3789999999963 469999999999999999999999999999999999999999999999999876 345678899
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
||+||++.+|.. |+.||+.+.... ...++..+ .+.+.+..+ |++........+||||||||++|||||+.
T Consensus 78 g~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~ 150 (301)
T TIGR03522 78 GYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIH 150 (301)
T ss_pred EEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 999999999876 999999864211 11122211 123444454 67777778888999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 151 ~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 151 DPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998778999999999999876 999999999999999999998654
No 432
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=368.18 Aligned_cols=218 Identities=28% Similarity=0.538 Sum_probs=183.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
+|+++|++|+|++ .++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 5899999999963 3699999999999999999999999999999999999984 899999999988653 33
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC---CCHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~---~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+++.++|++|++.+|..|++||+.++... ...++ +.++.+..++.+ ..++..+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWD-------EVKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCc-------hhHHHHhCChhhcCHHHH
Confidence 4567889999999999999999999875321 11111 222233222221 112345677889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14262 233 VER 235 (250)
T ss_pred HhC
Confidence 764
No 433
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=369.52 Aligned_cols=221 Identities=30% Similarity=0.489 Sum_probs=186.9
Q ss_pred CcceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCC---
Q 000689 424 VSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIK--- 495 (1350)
Q Consensus 424 ~~g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~--- 495 (1350)
..+.|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++.
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999973 3599999999999999999999999999999999999875 7999999998774
Q ss_pred -CCCHHHHhccEEEEccCCCcccccHHHHhhcCCC--CCC-----HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCC
Q 000689 496 -SLKLRWLRQQIGLVSQEPALFATTIKENILLGRP--DAD-----LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQL 567 (1350)
Q Consensus 496 -~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~~-----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~L 567 (1350)
..+...+++.++|++|++.+|.+|++||+.++.. ... .+++.++++.+++. +++.+..++...+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALW-------DEVKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCc-------hhhhHHHhCCcccC
Confidence 2344567889999999999998999999987631 111 12233333333322 23345567778899
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988778999999999999965 9999999999999999
Q ss_pred ChHHHHhc
Q 000689 647 THDELIAK 654 (1350)
Q Consensus 647 ~~~~l~~~ 654 (1350)
+++++...
T Consensus 243 ~~~~~~~~ 250 (265)
T PRK14252 243 ATDTIFIK 250 (265)
T ss_pred CHHHHHhC
Confidence 99998765
No 434
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.8e-40 Score=382.18 Aligned_cols=213 Identities=26% Similarity=0.435 Sum_probs=182.1
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+ ...|++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 36999999999999999999999999999999999999999999999999997654 5678999
Q ss_pred EEEccCCccC-cccHHHHhccCCC--CCCHHHH----HHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLF-ASTIYENIAYGHE--SATESEI----IEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF-~gTIreNL~~~~~--~~td~ei----~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
+|+||++.+| ..|++||+.+... ..+..+. .++++..+ |++..++.+ .+||||||||++|||
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------L~~~~~~~~----~~LS~G~kqrv~lA~ 185 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADARV----SDLSGGMKRRLTLAR 185 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchhhCCCh----hhCCHHHHHHHHHHH
Confidence 9999999886 5699999975321 1222222 22333333 344445555 469999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+.+.+++.|+++. .|+|||++||+++.+.. ||+|++|++|+|++.|+++++.+.
T Consensus 186 aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 186 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999999999999875 48999999999999976 999999999999999999999754
No 435
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=383.69 Aligned_cols=213 Identities=31% Similarity=0.507 Sum_probs=181.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC----CHHHH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL----KLRWL 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~----~~~~~ 502 (1350)
+|++ |++++|++ . .+ |+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++... +....
T Consensus 1 ~l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~ 74 (352)
T PRK11144 1 MLEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPE 74 (352)
T ss_pred CeEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchh
Confidence 3677 99999963 2 23 89999999999999999999999999999999999999999999998653 23456
Q ss_pred hccEEEEccCCCccc-ccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 503 RQQIGLVSQEPALFA-TTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 503 r~~i~~v~Q~~~lf~-~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+++++||+|++.+|+ .|++|||.++......+++.+. +..+ |++........+||||||||++|||||
T Consensus 75 ~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~---------l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL 143 (352)
T PRK11144 75 KRRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKI---------VALL--GIEPLLDRYPGSLSGGEKQRVAIGRAL 143 (352)
T ss_pred hCCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHH---------HHHc--CCchhhhCCcccCCHHHHHHHHHHHHH
Confidence 789999999999996 4999999987543222333333 3333 555566677789999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhccC
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAKGE 656 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 656 (1350)
+.+|++|||||||++||+.+++.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++..++.
T Consensus 144 ~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 144 LTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 999999999999999999999999999998753 7999999999998865 99999999999999999999987743
No 436
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=369.32 Aligned_cols=219 Identities=29% Similarity=0.484 Sum_probs=184.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 46999999999963 3599999999999999999999999999999999999985 48999999999854 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC---CCH----HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD---ADL----NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~---~~~----~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...++++++||+|++.+|+.|++||+.++... ... +.+.++++..++.+++ .......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 56778899999999999999999999875321 111 1223334433333222 233456778999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-----CCEEEEe
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ-----QGSVSEI 645 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~-----~G~i~~~ 645 (1350)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998778999999999999876 99999998 5999999
Q ss_pred cChHHHHhc
Q 000689 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999998765
No 437
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=369.66 Aligned_cols=223 Identities=30% Similarity=0.483 Sum_probs=186.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC--C---CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE--P---SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~--p---~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999964 369999999999999999999999999999999999975 4 59999999999864 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCC--CC-C----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHE--SA-T----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~--~~-t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
..+|++++|+||+|.+|..|+++|+.++.. .. . ++++.++++.+++.+.+ .........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEV-------KDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccch-------hhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 23445555666554322 2223445568999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999998
Q ss_pred hhcCCCchh
Q 000689 1307 LKNNPDGCY 1315 (1350)
Q Consensus 1307 l~~~~~g~y 1315 (1350)
... +...+
T Consensus 235 ~~~-~~~~~ 242 (252)
T PRK14255 235 FLN-PKEKE 242 (252)
T ss_pred hcC-CCChH
Confidence 765 34433
No 438
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.2e-40 Score=363.11 Aligned_cols=210 Identities=26% Similarity=0.478 Sum_probs=181.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||++.|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 3699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEccCCccCcccHHHHhccCC---CC-CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1162 AIVPQEPCLFASTIYENIAYGH---ES-ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1162 ~~VpQdp~LF~gTIreNL~~~~---~~-~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
+|+||+|.+|..|++||+.++. .. ..++++.+.++..++.+ +.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997631 11 12233444454444421 2334556789999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhhcCEEEEEe-CCeEEEecChh
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRNAHVIAVID-DGKVAELGSHS 1304 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~~DrI~Vl~-~GrIvE~Gt~~ 1304 (1350)
++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999999875 3889999999999998899999995 67777889885
No 439
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.5e-39 Score=359.30 Aligned_cols=210 Identities=30% Similarity=0.459 Sum_probs=185.1
Q ss_pred EEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH----HHHhc
Q 000689 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL----RWLRQ 504 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~----~~~r~ 504 (1350)
.+.|+.|+|+.+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998866542 24567
Q ss_pred cEEEEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 505 QIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
.++|++|++.+|+.|++||+.++.+ ...++..++++..++.+.+..+|.|+++.++....+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999998899999998754 344555677777788888888999999999999999999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 000689 585 PAILLLDEATSALDSESEKLVQE--ALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGS 641 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~--~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~ 641 (1350)
|++|||||||++||+.+...+.+ .++.+. .++|+|++||+++.+..||++++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 455543 4799999999999998899999999884
No 440
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.3e-40 Score=361.45 Aligned_cols=206 Identities=35% Similarity=0.559 Sum_probs=170.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|++ +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .++
T Consensus 1 ~l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (214)
T TIGR02673 1 MIEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLR 78 (214)
T ss_pred CEEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 3789999999952 23699999999999999999999999999999999999999999999999999876543 467
Q ss_pred ccEEEEccCCCccc-ccHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 504 QQIGLVSQEPALFA-TTIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~-~ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+.++|++|++.+|. .|++||+.++... ...++..+ .+.+.+..+ |+.........+||||||||++||||
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 79 RRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQR-----RVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred hheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999986 5999999875211 11111111 112233333 44434455567899999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGS 641 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~ 641 (1350)
|+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999875 48999999999999976 99999999985
No 441
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.3e-40 Score=361.56 Aligned_cols=206 Identities=32% Similarity=0.524 Sum_probs=172.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH---HHHhc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL---RWLRQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~---~~~r~ 504 (1350)
|+++|++++|+++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 359999999999999999999999999999999999999999999999999977654 34678
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
.++||+|++.+|.. |++||+.++.. ..+.++..+. +.+.+..+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKR-----VPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999875 99999987632 1122221111 12233333 555555566779999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 642 (1350)
+.+|+++||||||++||+++.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 58999999999999976 999999999974
No 442
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=371.37 Aligned_cols=219 Identities=29% Similarity=0.477 Sum_probs=182.6
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 46999999999963 359999999999999999999999999999999999864 4999999999988643 3
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|++++||+|++.+|..|++|||.++... . +.+ .+.++++..++. +++.......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALW-------DEVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCc-------cchhhHhhCChhhCCHHH
Confidence 34578899999999999988999999986321 1 111 122222222211 112234466778999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|||++|||||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999865 99999999999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+..+
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 9765
No 443
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=380.26 Aligned_cols=229 Identities=19% Similarity=0.306 Sum_probs=188.8
Q ss_pred cEEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC----CCccEEEECCccCCCCCHHH
Q 000689 1082 EVELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE----PSSGRVMIDGKDIRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~----p~~G~I~iDG~di~~~~l~~ 1156 (1350)
-|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||+++.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996432 2469999999999999999999999999999999999986 58999999999999888766
Q ss_pred hh----cccEEEccCCcc--C-cccHHHHhccC---C---C----C--CCHHHHHHHHHHhccHHHHhcCCCCccccccC
Q 000689 1157 LR----RHMAIVPQEPCL--F-ASTIYENIAYG---H---E----S--ATESEIIEAARLANADKFISSLPDGYKTFVGE 1217 (1350)
Q Consensus 1157 lR----~~i~~VpQdp~L--F-~gTIreNL~~~---~---~----~--~td~ei~~al~~a~l~~~I~~lp~Gldt~vge 1217 (1350)
++ ++|+||||+|.. + ..||.+|+... . . + ...+++.++++.+++.+.-. ....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~--------~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD--------AMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH--------HHhC
Confidence 53 479999999963 3 35899988531 0 0 0 01235666777777753211 1223
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeC
Q 000689 1218 RGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDD 1294 (1350)
Q Consensus 1218 ~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~ 1294 (1350)
...+||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.+ |.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3467999999999999999999999999999999999999999999998753 8999999999999966 999999999
Q ss_pred CeEEEecChhHHhhcCCCchhHHHH
Q 000689 1295 GKVAELGSHSHLLKNNPDGCYARMI 1319 (1350)
Q Consensus 1295 GrIvE~Gt~~eLl~~~~~g~y~~l~ 1319 (1350)
|+|+|.|+++++++. +...|.+.+
T Consensus 235 G~ive~g~~~~i~~~-p~~~y~~~l 258 (330)
T PRK15093 235 GQTVETAPSKELVTT-PHHPYTQAL 258 (330)
T ss_pred CEEEEECCHHHHHhC-CCCHHHHHH
Confidence 999999999999876 566776643
No 444
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1e-39 Score=361.64 Aligned_cols=204 Identities=27% Similarity=0.464 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH---hhc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS---LRR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~---lR~ 1159 (1350)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 236999999999999999999999999999999999999999999999999998776543 688
Q ss_pred ccEEEccCCcc-CcccHHHHhccCC--CCCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1160 HMAIVPQEPCL-FASTIYENIAYGH--ESATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1160 ~i~~VpQdp~L-F~gTIreNL~~~~--~~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
.++|+||+|.+ +..|++||+.++. ...+++ ++.++++..++.++..+ ...+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHHH
Confidence 99999999986 4679999998752 122333 34455666666554433 346799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEE
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAE 1299 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE 1299 (1350)
|||++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 47899999999999976 89999999999853
No 445
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=369.32 Aligned_cols=218 Identities=27% Similarity=0.402 Sum_probs=185.1
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhcc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQ 505 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~ 505 (1350)
..|+++||+++|++ ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 36999999999973 359999999999999999999999999999999999999999999999999988887788889
Q ss_pred EEEEccCCCccc-ccHHHHhhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 506 IGLVSQEPALFA-TTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
++||+|++.+|. .|++||+.++.... ..+.. ...+.+.+..+ |++......+.+||||||||++||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~la 155 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED-----EEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWIA 155 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHH-----HHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHHH
Confidence 999999998875 59999998763111 00110 01112233333 555556677889999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHh
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
||++.+|++|||||||++||+.+.+.+.+.|.++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 156 MVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999999999999998753 7899999999998865 99999999999999999988764
No 446
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.4e-40 Score=347.26 Aligned_cols=172 Identities=42% Similarity=0.760 Sum_probs=162.6
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+.. ..++++|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++.+++...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999743 246999999999999999999999999999999999999999999999999999999889999999
Q ss_pred EEccCCccCcccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCE
Q 000689 1163 IVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEI 1242 (1350)
Q Consensus 1163 ~VpQdp~LF~gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~I 1242 (1350)
|++|+|.+|.+|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhhcCEEEEEeCCeE
Q 000689 1243 MLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRNAHVIAVIDDGKV 1297 (1350)
Q Consensus 1243 LlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~~DrI~Vl~~GrI 1297 (1350)
|||||||++||+.+.+.+.+.|++.. +|+|+|+++|+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48999999999999988999999999975
No 447
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.1e-39 Score=367.41 Aligned_cols=219 Identities=26% Similarity=0.425 Sum_probs=184.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCee-----CCCCCHHH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHD-----IKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~-----~~~~~~~~ 501 (1350)
.|+++|++++|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 6999999999974 359999999999999999999999999999999999999999999999998 77665543
Q ss_pred ----HhccEEEEccCCC--ccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCcc-chhcCCCCCCChH
Q 000689 502 ----LRQQIGLVSQEPA--LFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFD-TQVRERGVQLSGG 570 (1350)
Q Consensus 502 ----~r~~i~~v~Q~~~--lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~-t~~~~~g~~LSgG 570 (1350)
+++.++||+|++. ++. .|+.+||.+... .....+..+ .+.+++..+ |++ +..++.+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 343 488999865311 111122211 234566666 454 4677888999999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988753 8899999999999975 99999999999999999
Q ss_pred hHHHHhcc
Q 000689 648 HDELIAKG 655 (1350)
Q Consensus 648 ~~~l~~~~ 655 (1350)
++++..++
T Consensus 236 ~~~~~~~~ 243 (258)
T PRK11701 236 TDQVLDDP 243 (258)
T ss_pred HHHHhcCC
Confidence 99997653
No 448
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=379.13 Aligned_cols=228 Identities=25% Similarity=0.398 Sum_probs=184.5
Q ss_pred eEEEEEEEEECCCC-CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC----CCCcEEEECCeeCCCCCHHH
Q 000689 427 LIELKHVDFSYPSR-PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD----PTSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~-~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~----~~~G~i~i~g~~~~~~~~~~ 501 (1350)
.|+++|++++|+.. ....+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 58999999999632 12469999999999999999999999999999999999986 58999999999998887655
Q ss_pred H----hccEEEEccCCC--ccc-ccHHHHhhcCCC---CC-----CHHHHHHHHHHhchHHHHhcCCCCcc---chhcCC
Q 000689 502 L----RQQIGLVSQEPA--LFA-TTIKENILLGRP---DA-----DLNEIEEAARVANAYSFIIKLPDGFD---TQVRER 563 (1350)
Q Consensus 502 ~----r~~i~~v~Q~~~--lf~-~ti~eNi~~g~~---~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~~ 563 (1350)
+ ++.|+||+|+|. ++. .||.+|+..... .. ..++. ...+.+.+..+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 4 347999999996 333 489999864211 00 00111 11223344444 443 234677
Q ss_pred CCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCC
Q 000689 564 GVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQG 640 (1350)
Q Consensus 564 g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G 640 (1350)
+.+||||||||++|||||+.+|+||||||||++||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999998853 8999999999999976 9999999999
Q ss_pred EEEEecChHHHHhccCCcHHHH
Q 000689 641 SVSEIGTHDELIAKGENGVYAK 662 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~~~~~~y~~ 662 (1350)
+|++.|+.+++..++ ...|.+
T Consensus 236 ~ive~g~~~~i~~~p-~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTP-HHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCC-CCHHHH
Confidence 999999999998764 334543
No 449
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=369.60 Aligned_cols=218 Identities=32% Similarity=0.498 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC-----CccEEEECCccCCC--CCH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP-----SSGRVMIDGKDIRK--YNL 1154 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p-----~~G~I~iDG~di~~--~~l 1154 (1350)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 20 ~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 20 VFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred eEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 5999999999964 3699999999999999999999999999999999999863 69999999999864 345
Q ss_pred HHhhcccEEEccCCccCcccHHHHhccCCCC-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHH
Q 000689 1155 KSLRRHMAIVPQEPCLFASTIYENIAYGHES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQR 1229 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQr 1229 (1350)
..+|++|+|+||++.+|..|+++||.++... ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 5678999999999999989999999875311 123445666777776554432 2334556899999999
Q ss_pred HHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEEEEEe---------CCeEEE
Q 000689 1230 VAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVIAVID---------DGKVAE 1299 (1350)
Q Consensus 1230 laiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI~Vl~---------~GrIvE 1299 (1350)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998778999999999999865 99999997 899999
Q ss_pred ecChhHHhhc
Q 000689 1300 LGSHSHLLKN 1309 (1350)
Q Consensus 1300 ~Gt~~eLl~~ 1309 (1350)
.|+++++...
T Consensus 250 ~g~~~~~~~~ 259 (274)
T PRK14265 250 FSPTEQMFGS 259 (274)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 450
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.3e-39 Score=360.82 Aligned_cols=209 Identities=32% Similarity=0.532 Sum_probs=174.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHH---HHh
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLR---WLR 503 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~---~~r 503 (1350)
+|+++|++++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. .+|
T Consensus 1 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~ 78 (222)
T PRK10908 1 MIRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLR 78 (222)
T ss_pred CEEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHH
Confidence 3789999999952 23699999999999999999999999999999999999999999999999999876543 367
Q ss_pred ccEEEEccCCCcc-cccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 504 QQIGLVSQEPALF-ATTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf-~~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
+.++|++|++.++ ..|++||+.++.. ..+.++..+.+ .+.+..+ |+.........+||||||||++||||
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lara 151 (222)
T PRK10908 79 RQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRV-----SAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARA 151 (222)
T ss_pred hheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHH
Confidence 8999999999875 5699999988531 12222222211 1223333 44445566778999999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 644 (1350)
++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 152 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 152 VVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999874 47999999999999976 99999999999863
No 451
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.8e-39 Score=366.29 Aligned_cols=226 Identities=25% Similarity=0.402 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCcc-----CCCCCHHH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKD-----IRKYNLKS 1156 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~d-----i~~~~l~~ 1156 (1350)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 369999999999999999999999999999999999999999999999999 87776554
Q ss_pred ----hhcccEEEccCCc--cC-cccHHHHhccCC---CCCCHHHHHHHHHHhccHHHHhcCCCCcc-ccccCCCCCCChh
Q 000689 1157 ----LRRHMAIVPQEPC--LF-ASTIYENIAYGH---ESATESEIIEAARLANADKFISSLPDGYK-TFVGERGVQLSGG 1225 (1350)
Q Consensus 1157 ----lR~~i~~VpQdp~--LF-~gTIreNL~~~~---~~~td~ei~~al~~a~l~~~I~~lp~Gld-t~vge~G~~LSgG 1225 (1350)
+|+.++||||+|. ++ ..|+.+|+.+.. ......++.+ .++++++.+ |++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 33 348888886421 1111122211 134555554 333 3456677889999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecC
Q 000689 1226 QKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1226 QrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt 1302 (1350)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ |.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 7899999999999975 99999999999999999
Q ss_pred hhHHhhcCCCchhHHH
Q 000689 1303 HSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1303 ~~eLl~~~~~g~y~~l 1318 (1350)
++++... +...|.+.
T Consensus 236 ~~~~~~~-~~~~~~~~ 250 (258)
T PRK11701 236 TDQVLDD-PQHPYTQL 250 (258)
T ss_pred HHHHhcC-CCCHHHHH
Confidence 9999865 34445544
No 452
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.6e-39 Score=361.76 Aligned_cols=212 Identities=31% Similarity=0.457 Sum_probs=176.3
Q ss_pred eEEEEEEEEECCCCCC-CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH---H
Q 000689 427 LIELKHVDFSYPSRPE-VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW---L 502 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~-~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~---~ 502 (1350)
.|+++|++++|++... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 6999999999974211 25999999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hccEEEEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHH
Q 000689 503 -RQQIGLVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIA 578 (1350)
Q Consensus 503 -r~~i~~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iA 578 (1350)
++.++|++|++.+|.. |++||+.++.. .....+.. ..+.+.+..+ |++........+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSR-----NGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3679999999998875 99999986421 11111111 1123334444 555555566779999999999999
Q ss_pred HHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-C-CCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 000689 579 RAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-I-GRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 579 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~itH~l~~~~~~d~i~vl~~G~i~~~ 645 (1350)
|||+.+|++|||||||++||+.+.+.+.+.|+++. + |+|+|++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998874 3 7899999999999888999999999999864
No 453
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=362.95 Aligned_cols=210 Identities=32% Similarity=0.596 Sum_probs=183.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|+. ++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|++||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 37999999999999999999999999999999999999999999999999987654 368999
Q ss_pred EEccCCccCc-ccHHHHhccCCCC--C----CHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHES--A----TESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~~--~----td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+|. .|++||+.++... . .++++.++++..++.+++.+. ..+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999885 7999999864321 1 233456677777776665443 35799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++++|++|+|||||++||+.+.+.+.+.|++... |+|+|++||++..+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998653 8999999999999876 999999999999999999999865
No 454
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-40 Score=359.80 Aligned_cols=201 Identities=23% Similarity=0.482 Sum_probs=171.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 369999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEccCCccCcc-cHHHHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..++.+ .......+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 142 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSE-----------YANKRVEELSKGNQQKVQFIAA 142 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChH-----------HHhCcHhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976421 111 223344444444433 3334456799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEec
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~G 1301 (1350)
++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 143 VIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 999999999999999999999999999999864 57899999999999865 9999999999999865
No 455
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=367.54 Aligned_cols=218 Identities=30% Similarity=0.534 Sum_probs=181.7
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~~ 499 (1350)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 5899999999974 3599999999999999999999999999999999999974 79999999999853 345
Q ss_pred HHHhccEEEEccCCCccc-ccHHHHhhcCCCC---CCHHH----HHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 500 RWLRQQIGLVSQEPALFA-TTIKENILLGRPD---ADLNE----IEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~-~ti~eNi~~g~~~---~~~~~----~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
..+|+.++|++|++.+|. .|++||+.++... .+.++ +.++++..++.+ +........+.+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWN-------EVKDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHH
Confidence 567889999999999987 4999999875321 11111 122222222211 12345567778999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe------CCEEEE
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ------QGSVSE 644 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~------~G~i~~ 644 (1350)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988778999999999999865 99999997 899999
Q ss_pred ecChHHHHhc
Q 000689 645 IGTHDELIAK 654 (1350)
Q Consensus 645 ~g~~~~l~~~ 654 (1350)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999998764
No 456
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.3e-39 Score=345.78 Aligned_cols=172 Identities=45% Similarity=0.730 Sum_probs=161.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. +.++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 4789999999742 246999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEccCCCcccccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCE
Q 000689 508 LVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAI 587 (1350)
Q Consensus 508 ~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~i 587 (1350)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred eEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 000689 588 LLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRKADVVAVLQQGSV 642 (1350)
Q Consensus 588 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~~d~i~vl~~G~i 642 (1350)
|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||++++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 48999999999999988999999999974
No 457
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.2e-39 Score=368.78 Aligned_cols=221 Identities=28% Similarity=0.415 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999964 36999999999999999999999999999999999999999999999999998888878888999
Q ss_pred EEccCCCc-ccccHHHHhhcCCCCCCH-HHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCC
Q 000689 508 LVSQEPAL-FATTIKENILLGRPDADL-NEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNP 585 (1350)
Q Consensus 508 ~v~Q~~~l-f~~ti~eNi~~g~~~~~~-~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~ 585 (1350)
|++|++.+ +..|++||+.++...... ...........+.+.+..+ |+.......+.+||||||||++||||++.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999864 467999999886421100 0000000011223444444 5555566778899999999999999999999
Q ss_pred CEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChHHHHh
Q 000689 586 AILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIR-KADVVAVLQQGSVSEIGTHDELIA 653 (1350)
Q Consensus 586 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~-~~d~i~vl~~G~i~~~g~~~~l~~ 653 (1350)
+++||||||++||+.+...+.+.|+++. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999875 4799999999999996 499999999999999999888753
No 458
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-39 Score=374.97 Aligned_cols=219 Identities=28% Similarity=0.499 Sum_probs=188.0
Q ss_pred CcEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC-----CCccEEEECCccCCC--CC
Q 000689 1081 GEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE-----PSSGRVMIDGKDIRK--YN 1153 (1350)
Q Consensus 1081 g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~-----p~~G~I~iDG~di~~--~~ 1153 (1350)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 36999999999964 369999999999999999999999999999999999986 689999999999865 34
Q ss_pred HHHhhcccEEEccCCccCcccHHHHhccCCCC-------------------CCHHHHHHHHHHhccHHHHhcCCCCcccc
Q 000689 1154 LKSLRRHMAIVPQEPCLFASTIYENIAYGHES-------------------ATESEIIEAARLANADKFISSLPDGYKTF 1214 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~-------------------~td~ei~~al~~a~l~~~I~~lp~Gldt~ 1214 (1350)
...+|++++||||++.+|++|++||+.++... ..++++.++++..++.+ ++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWD-------EVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCch-------hhhHH
Confidence 66788999999999999999999999865210 01233555555555433 33445
Q ss_pred ccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhhh-cCEE-EEE
Q 000689 1215 VGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRN-AHVI-AVI 1292 (1350)
Q Consensus 1215 vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~~-~DrI-~Vl 1292 (1350)
+...+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 56677889999999999999999999999999999999999999999999998777899999999999865 9997 567
Q ss_pred eCCeEEEecChhHHhhc
Q 000689 1293 DDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1293 ~~GrIvE~Gt~~eLl~~ 1309 (1350)
++|++++.|+++++++.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 459
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=366.07 Aligned_cols=227 Identities=26% Similarity=0.467 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEEC------CccCCCCCHH
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMID------GKDIRKYNLK 1155 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iD------G~di~~~~l~ 1155 (1350)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |.++..++..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999964 369999999999999999999999999999999999999998666555 5777777778
Q ss_pred HhhcccEEEccCCccCcc-cHHHHhccCCC--CC-CHHH----HHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHH
Q 000689 1156 SLRRHMAIVPQEPCLFAS-TIYENIAYGHE--SA-TESE----IIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1156 ~lR~~i~~VpQdp~LF~g-TIreNL~~~~~--~~-td~e----i~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQr 1227 (1350)
.+|+.++|+||+|.+|.+ |+++|+.++.. .. .+++ +.++++..++++++. ......+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVY-------DRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccch-------hhhcCCcccCCHHHH
Confidence 889999999999999875 99999986521 11 2222 345555556543321 123345667999999
Q ss_pred HHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcCCceEEEEecCchhhh-hcCEEEEEeCCeEEEecChhHH
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR-NAHVIAVIDDGKVAELGSHSHL 1306 (1350)
Q Consensus 1228 QrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~g~TvI~IaHRlsti~-~~DrI~Vl~~GrIvE~Gt~~eL 1306 (1350)
||++||||++++|++|||||||++||..+++.+.+.|++..+++|+|+|||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877899999999999995 5999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 000689 1307 LKNNPDGCYARMI 1319 (1350)
Q Consensus 1307 l~~~~~g~y~~l~ 1319 (1350)
.+. +...|.+.+
T Consensus 240 ~~~-~~~~~~~~~ 251 (257)
T PRK14246 240 FTS-PKNELTEKY 251 (257)
T ss_pred HhC-CCcHHHHHH
Confidence 876 455565443
No 460
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=382.34 Aligned_cols=210 Identities=27% Similarity=0.445 Sum_probs=184.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCC----CHHHhh
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKY----NLKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~----~l~~lR 1158 (1350)
|++ |++++|.+. .+ |+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +....|
T Consensus 2 l~~-~l~k~~~~~----~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGDL----CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCCE----EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 999999532 23 99999999999999999999999999999999999999999999998653 245568
Q ss_pred cccEEEccCCccCc-ccHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1159 RHMAIVPQEPCLFA-STIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~-gTIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
++++||||++.+|. .|++||+.++.....++++.+.++..++.++.... ..+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRY-----------PGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHHHHH
Confidence 89999999999996 59999999875444556677778887776655443 3579999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 99999999999999999999999999998753 7899999999998866 999999999999999999999976
No 461
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.4e-40 Score=360.72 Aligned_cols=201 Identities=33% Similarity=0.553 Sum_probs=171.0
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCC--CCHHHhhcc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRK--YNLKSLRRH 1160 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~--~~l~~lR~~ 1160 (1350)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 578999999964 369999999999999999999999999999999999999999999999999853 455678899
Q ss_pred cEEEccCCccCc-ccHHHHhccCCC---CCCHH----HHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHH
Q 000689 1161 MAIVPQEPCLFA-STIYENIAYGHE---SATES----EIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAI 1232 (1350)
Q Consensus 1161 i~~VpQdp~LF~-gTIreNL~~~~~---~~td~----ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlai 1232 (1350)
++|+||+|.+|. .|++||+.++.. ..+.+ ++.++++..++.+. +.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADK-----------ADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhhCccccCHHHHHHHHH
Confidence 999999999886 699999986521 22222 23444444444433 334446799999999999
Q ss_pred HHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeE
Q 000689 1233 ARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKV 1297 (1350)
Q Consensus 1233 ARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrI 1297 (1350)
|||++++|++|||||||++||+.+.+.+.+.|++.. .|+|+|++||+++.+.. ||+|++|++|+|
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 48999999999999965 999999999975
No 462
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=366.63 Aligned_cols=219 Identities=32% Similarity=0.500 Sum_probs=184.7
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~--~~ 498 (1350)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 37999999999973 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCCC-----CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA-----DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
...+|+.|+|++|++.+|+.|+.||+.++.... ..+.+.++++.+++.+.+ .......+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 456788999999999999889999998863211 112223333333333222 23455677899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEE
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ---------QGSVS 643 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~---------~G~i~ 643 (1350)
|++|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778999999999999865 99999997 89999
Q ss_pred EecChHHHHhc
Q 000689 644 EIGTHDELIAK 654 (1350)
Q Consensus 644 ~~g~~~~l~~~ 654 (1350)
+.|+.+++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999998765
No 463
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.2e-40 Score=361.11 Aligned_cols=202 Identities=30% Similarity=0.493 Sum_probs=167.3
Q ss_pred EEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEE
Q 000689 429 ELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGL 508 (1350)
Q Consensus 429 ~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~ 508 (1350)
+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999964 35999999999999999999999999999999999999999999999998764 46778999
Q ss_pred EccCCCc---ccccHHHHhhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 509 VSQEPAL---FATTIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 509 v~Q~~~l---f~~ti~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|+|++.+ ++.|++||+.++.... ..++..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKA-----KVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHH-----HHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999876 5679999998864311 0011111 122333333 4554555667899999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999875 68999999999999875 9999999986 55544
No 464
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=368.42 Aligned_cols=222 Identities=26% Similarity=0.391 Sum_probs=185.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC--------CcEEEECCeeCCCCC
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT--------SGQVLLDGHDIKSLK 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~--------~G~i~i~g~~~~~~~ 498 (1350)
+|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+
T Consensus 1 ml~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~ 77 (272)
T PRK13547 1 MLTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAID 77 (272)
T ss_pred CeEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCC
Confidence 3789999999963 36999999999999999999999999999999999999998 999999999998887
Q ss_pred HHHHhccEEEEccCCC-cccccHHHHhhcCCCCC-CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHH
Q 000689 499 LRWLRQQIGLVSQEPA-LFATTIKENILLGRPDA-DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIA 576 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~-lf~~ti~eNi~~g~~~~-~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~ 576 (1350)
...+++.++||+|++. +|..|++||+.++.... .............+.+.+..+ |+++..+....+||||||||++
T Consensus 78 ~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ 155 (272)
T PRK13547 78 APRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQ 155 (272)
T ss_pred HHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHH
Confidence 7778888999999986 56789999998863211 000000000011123344444 7777778888999999999999
Q ss_pred HHHHhc---------CCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000689 577 IARAML---------KNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 577 iARal~---------~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 644 (1350)
|||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|+|++
T Consensus 156 laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~ 235 (272)
T PRK13547 156 FARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA 235 (272)
T ss_pred HHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE
Confidence 999999 59999999999999999999999999998753 7999999999999864 99999999999999
Q ss_pred ecChHHHHh
Q 000689 645 IGTHDELIA 653 (1350)
Q Consensus 645 ~g~~~~l~~ 653 (1350)
.|++++++.
T Consensus 236 ~g~~~~~~~ 244 (272)
T PRK13547 236 HGAPADVLT 244 (272)
T ss_pred ecCHHHHcC
Confidence 999988864
No 465
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=367.46 Aligned_cols=212 Identities=28% Similarity=0.430 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC--------ccEEEECCccCCCCCH
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS--------SGRVMIDGKDIRKYNL 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~--------~G~I~iDG~di~~~~l 1154 (1350)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 36999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHhhcccEEEccCCc-cCcccHHHHhccCCC-C------CC---HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCC
Q 000689 1155 KSLRRHMAIVPQEPC-LFASTIYENIAYGHE-S------AT---ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLS 1223 (1350)
Q Consensus 1155 ~~lR~~i~~VpQdp~-LF~gTIreNL~~~~~-~------~t---d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LS 1223 (1350)
..+|+.++|+||++. +|..|++||+.++.. . .+ ++.++++++..++. +.++....+||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGAT-----------ALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcH-----------hhhcCCcccCC
Confidence 888889999999986 678899999987531 1 11 12344455555443 44445567899
Q ss_pred hhHHHHHHHHHHhc---------cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEE
Q 000689 1224 GGQKQRVAIARAFV---------RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAV 1291 (1350)
Q Consensus 1224 gGQrQrlaiARALL---------r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~V 1291 (1350)
||||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ |+|+|+|+|+++.+.. ||+|++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998653 7999999999999964 999999
Q ss_pred EeCCeEEEecChhHHhh
Q 000689 1292 IDDGKVAELGSHSHLLK 1308 (1350)
Q Consensus 1292 l~~GrIvE~Gt~~eLl~ 1308 (1350)
|++|+|++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999874
No 466
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-40 Score=335.35 Aligned_cols=223 Identities=27% Similarity=0.480 Sum_probs=193.5
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHH-Hhc
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRW-LRQ 504 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~-~r~ 504 (1350)
+.+..+|+.++|..+ +|++++||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.||+.++... -|.
T Consensus 3 ~~L~a~~l~K~y~kr---~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYKKR---KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhCCe---eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 458899999999754 6999999999999999999999999999999999999999999999999999999765 456
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
.|||+||||.+|.+ ||+|||..-..- ...+...+.+...+.+.+..+ .+.+.-...+.+||||||.|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~-~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEI-REKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 79999999999987 999999865431 111222233333344555555 77788888999999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCch-hhhhcCEEEEEeCCEEEEecChHHHHhc
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLS-TIRKADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~-~~~~~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
+|+.++||||++++||.+-..|++.++.++ +|..|++.-|+.. |+.-|||.+++.+|+|..+|+++|+.++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999886 5889999999986 4667999999999999999999999876
No 467
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-40 Score=358.92 Aligned_cols=205 Identities=25% Similarity=0.485 Sum_probs=174.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
++++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999988753 4577899
Q ss_pred EEccCCCcccc-cHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFAT-TIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|++|++.++.. |++||+.++.. .....+.. ..+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 99999987531 11111111 1233455555 666667777889999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999998764
No 468
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=9.4e-40 Score=359.89 Aligned_cols=205 Identities=37% Similarity=0.583 Sum_probs=174.6
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCC--CCHHHHhcc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKS--LKLRWLRQQ 505 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~--~~~~~~r~~ 505 (1350)
|+++||+++|++ .++|+++||++++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999974 359999999999999999999999999999999999999999999999999853 344567889
Q ss_pred EEEEccCCCccc-ccHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 506 IGLVSQEPALFA-TTIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 506 i~~v~Q~~~lf~-~ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
++|++|++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++|||||
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 599999987632 122222111 123444444 666667777889999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSV 642 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i 642 (1350)
+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999885 48999999999999975 999999999974
No 469
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2e-39 Score=382.13 Aligned_cols=234 Identities=35% Similarity=0.525 Sum_probs=188.3
Q ss_pred ceEEEEEEEEECCCC--------CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCee--CC
Q 000689 426 GLIELKHVDFSYPSR--------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHD--IK 495 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~--------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~--~~ 495 (1350)
..++++|++++|..+ ....+++||||++++||++||||+||||||||.++|+|+.+|++|+|.++|.+ ++
T Consensus 279 ~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~ 358 (539)
T COG1123 279 PLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLT 358 (539)
T ss_pred ceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccc
Confidence 468999999999742 13468999999999999999999999999999999999999999999999987 23
Q ss_pred CCCHHHHhccEEEEccCCC--cc-cccHHHHhhcCCCCCC-HHHHHHHHHHhchHHHHhcCCCCccc-hhcCCCCCCChH
Q 000689 496 SLKLRWLRQQIGLVSQEPA--LF-ATTIKENILLGRPDAD-LNEIEEAARVANAYSFIIKLPDGFDT-QVRERGVQLSGG 570 (1350)
Q Consensus 496 ~~~~~~~r~~i~~v~Q~~~--lf-~~ti~eNi~~g~~~~~-~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSgG 570 (1350)
.-+...+|+++-+|+|||. |- ..||.++|.-...... ...-...++.+.+.+.+ |+.. .....+.+||||
T Consensus 359 ~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~V-----gL~~~~l~ryP~elSGG 433 (539)
T COG1123 359 GGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELV-----GLPPEFLDRYPHELSGG 433 (539)
T ss_pred cchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHc-----CCCHHHHhcCchhcCcc
Confidence 2235567889999999996 33 3499999864321100 00111111233333333 4444 577889999999
Q ss_pred HHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 571 QKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 571 qkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
|||||||||||..+|+++|+|||||+||+-+...|.+.|+++.+ |.|.|+||||++.++. ||||+||++|+|+|.|+
T Consensus 434 QrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~ 513 (539)
T COG1123 434 QRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGP 513 (539)
T ss_pred hhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999998863 8999999999999988 99999999999999999
Q ss_pred hHHHHhccCCcHHHHHH
Q 000689 648 HDELIAKGENGVYAKLI 664 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~ 664 (1350)
.+++.+.+.+.+-+.|.
T Consensus 514 ~~~v~~~p~h~Ytr~L~ 530 (539)
T COG1123 514 TEKVFENPQHPYTRKLL 530 (539)
T ss_pred HHHHhcCCCChHHHHHH
Confidence 99999886444333333
No 470
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1e-39 Score=362.54 Aligned_cols=214 Identities=23% Similarity=0.400 Sum_probs=170.8
Q ss_pred EEEEEEEEECCCCC-CCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCC---CCccEEEECCccCCCCCHHHhh
Q 000689 1083 VELKHVDFSYPSRP-DIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYE---PSSGRVMIDGKDIRKYNLKSLR 1158 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~-~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~---p~~G~I~iDG~di~~~~l~~lR 1158 (1350)
++|+||+|+|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 57999999998642 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cccEEEccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhccHH-HHhcCCCCccccccCCCCCCChhHHHHHHHHHHh
Q 000689 1159 RHMAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADK-FISSLPDGYKTFVGERGVQLSGGQKQRVAIARAF 1236 (1350)
Q Consensus 1159 ~~i~~VpQdp~LF~g-TIreNL~~~~~~~td~ei~~al~~a~l~~-~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARAL 1236 (1350)
++++|+||++.+|.+ |++||+.++...........+.+....++ .+..+ +++.........||||||||++||||+
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421100000000000001111 12211 233233345568999999999999999
Q ss_pred ccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCc-hhh-hhcCEEEEEeCCeEEEec
Q 000689 1237 VRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRL-STI-RNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1237 Lr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRl-sti-~~~DrI~Vl~~GrIvE~G 1301 (1350)
+++|+||||||||++||+.+...+.+.|++.. +++|+|++||++ ..+ ..||+|++|++|+++++|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 478999999998 455 559999999999999876
No 471
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-39 Score=370.80 Aligned_cols=214 Identities=34% Similarity=0.549 Sum_probs=183.0
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
.++++|++++|+. ++.+|+||||+|++|+++|++||||||||||+++|+|++.|++|+|.++|.+...- ....|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999972 24699999999999999999999999999999999999999999999999988665 67788899
Q ss_pred EEEccCCCcccc-cHHHHhhcCCCCC------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHH
Q 000689 507 GLVSQEPALFAT-TIKENILLGRPDA------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIAR 579 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iAR 579 (1350)
|||||+|.+++. |++||+.|..... ..+.+.+.++.. |++.....+..+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~-----------~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELF-----------GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHc-----------CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998866 9999998742211 122333333332 3433225567789999999999999
Q ss_pred HhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 580 AMLKNPAILLLDEATSALDSESEKLVQEALDRFMI-G-RTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 580 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~-~-~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
||+.+|++|||||||++||+.+...+.+.|+++.+ | +||+++||.++.+.. ||+|++|++|+++..|+.+++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999864 5 799999999999987 999999999999999998887643
No 472
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=371.78 Aligned_cols=222 Identities=29% Similarity=0.486 Sum_probs=185.4
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--K 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~ 498 (1350)
..|+++|++++|++ .++|+++||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++... +
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 47999999999974 359999999999999999999999999999999999986 6899999999998643 3
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCCC--------------CHHHHHHHHHHhchHHHHh--cCCCCccchhcC
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPDA--------------DLNEIEEAARVANAYSFII--KLPDGFDTQVRE 562 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~--------------~~~~~~~~~~~~~~~~~i~--~lp~g~~t~~~~ 562 (1350)
...+|+.++||+|++.+|+.|++||+.++.... ...+. ....+.+.+. .+++++++..+.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~l~~~~~~~~~~ 196 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDA----EDELVERSLRQAALWDEVNDRLDD 196 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHH----HHHHHHHHHHHcCCchhhhHHhcC
Confidence 556788999999999999999999999763210 00000 0011112222 233345566778
Q ss_pred CCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE-EEEeCC
Q 000689 563 RGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVV-AVLQQG 640 (1350)
Q Consensus 563 ~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i-~vl~~G 640 (1350)
.+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++ ++|++|
T Consensus 197 ~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~G 276 (305)
T PRK14264 197 NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTGG 276 (305)
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecCC
Confidence 88999999999999999999999999999999999999999999999998777999999999999865 9997 567999
Q ss_pred EEEEecChHHHHhc
Q 000689 641 SVSEIGTHDELIAK 654 (1350)
Q Consensus 641 ~i~~~g~~~~l~~~ 654 (1350)
++++.|+++++...
T Consensus 277 ~i~~~g~~~~~~~~ 290 (305)
T PRK14264 277 ELVEYDDTDKIFEN 290 (305)
T ss_pred EEEEeCCHHHHHhC
Confidence 99999999998764
No 473
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3e-39 Score=355.35 Aligned_cols=202 Identities=34% Similarity=0.597 Sum_probs=176.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
++++||+++|+. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .+|++++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987644 4678899
Q ss_pred EEccCCccCcc-cHHHHhccCC-CC-----CCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGH-ES-----ATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~-~~-----~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
||||+|.+|.+ |++||+.++. +. ..++++.++++..++.+...+.| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999874 9999997542 11 12345677888888877665554 4799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecC
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGS 1302 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt 1302 (1350)
++++|+|+||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999999875 37899999999999865 99999999999999874
No 474
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.3e-39 Score=364.62 Aligned_cols=225 Identities=25% Similarity=0.412 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCC----CccEEEECCccCCCCCHHHh
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEP----SSGRVMIDGKDIRKYNLKSL 1157 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p----~~G~I~iDG~di~~~~l~~l 1157 (1350)
.|+++||+++| . .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 2699999999999999999999999999999999999999 999999999998632 223
Q ss_pred hcccEEEccCCc-cCc--ccHHHHhccC----CCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHH
Q 000689 1158 RRHMAIVPQEPC-LFA--STIYENIAYG----HESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRV 1230 (1350)
Q Consensus 1158 R~~i~~VpQdp~-LF~--gTIreNL~~~----~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrl 1230 (1350)
++.++||||+|. .|. .|+.+|+... .....+++++++++..++.++ ++.++....+||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 4888876431 112334567777777776442 1234455678999999999
Q ss_pred HHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHh
Q 000689 1231 AIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1231 aiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl 1307 (1350)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ |+|+|+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998643 7999999999999865 9999999999999999999998
Q ss_pred hcCCCc-hhHHHHHH
Q 000689 1308 KNNPDG-CYARMIQL 1321 (1350)
Q Consensus 1308 ~~~~~g-~y~~l~~~ 1321 (1350)
+. +.. .++.++..
T Consensus 230 ~~-~~~~~~~~~~~~ 243 (254)
T PRK10418 230 NA-PKHAVTRSLVSA 243 (254)
T ss_pred hC-CCCHHHHHHHHh
Confidence 76 334 34445543
No 475
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=364.09 Aligned_cols=220 Identities=27% Similarity=0.471 Sum_probs=184.3
Q ss_pred ceEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CC
Q 000689 426 GLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT-----SGQVLLDGHDIKS--LK 498 (1350)
Q Consensus 426 g~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~i~g~~~~~--~~ 498 (1350)
+.|+++|++|+|++ ..+|+|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 46999999999963 25999999999999999999999999999999999999985 8999999998753 34
Q ss_pred HHHHhccEEEEccCCCcccccHHHHhhcCCCC--C-CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHH
Q 000689 499 LRWLRQQIGLVSQEPALFATTIKENILLGRPD--A-DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQ 571 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGq 571 (1350)
...+|+.++|++|++.+|..|++||+.++... . +.. .+.++++..++.++ ++...++.+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDE-------IKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHH
Confidence 45678899999999999999999999875211 1 111 12223333332222 2234567788999999
Q ss_pred HHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC-----CEEE
Q 000689 572 KQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQ-----GSVS 643 (1350)
Q Consensus 572 kqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~-----G~i~ 643 (1350)
|||++|||||+++|++|||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999998864 48999999999999875 999999999 9999
Q ss_pred EecChHHHHhcc
Q 000689 644 EIGTHDELIAKG 655 (1350)
Q Consensus 644 ~~g~~~~l~~~~ 655 (1350)
+.|+++++...+
T Consensus 236 ~~~~~~~~~~~~ 247 (261)
T PRK14258 236 EFGLTKKIFNSP 247 (261)
T ss_pred EeCCHHHHHhCC
Confidence 999999997653
No 476
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.9e-40 Score=344.19 Aligned_cols=221 Identities=32% Similarity=0.504 Sum_probs=191.6
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHH-hcc
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWL-RQQ 505 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~-r~~ 505 (1350)
.+++++++++|++ ..+++|+||++++||+++|+|||||||||++|+|.|+|+|++|+|.++|+||..+++..+ |..
T Consensus 4 lL~v~~l~k~FGG---l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFGG---LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecCC---EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 4789999999974 369999999999999999999999999999999999999999999999999999997764 567
Q ss_pred EEEEccCCCcccc-cHHHHhhcCCCCC-----------CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHH
Q 000689 506 IGLVSQEPALFAT-TIKENILLGRPDA-----------DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQ 573 (1350)
Q Consensus 506 i~~v~Q~~~lf~~-ti~eNi~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkq 573 (1350)
|+--||.+.+|++ ||.||+..+.... ...+..++.+ .+.+.++.+ |++...++...+||+|||.
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e--~A~~~Le~v--gL~~~a~~~A~~LsyG~qR 156 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARE--RARELLEFV--GLGELADRPAGNLSYGQQR 156 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHH--HHHHHHHHc--CCchhhcchhhcCChhHhH
Confidence 9999999999976 9999999873211 0011122222 223444444 8888888889999999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|+.|||||+.+|++|+||||.++|.+.....+.+.|+++.+ |.|+++|.||++.+.. ||||+||+.|+++.+|+++|
T Consensus 157 ~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~e 236 (250)
T COG0411 157 RLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEE 236 (250)
T ss_pred HHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHH
Confidence 99999999999999999999999999999999999999874 5999999999999976 99999999999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
..++
T Consensus 237 V~~d 240 (250)
T COG0411 237 VRNN 240 (250)
T ss_pred HhcC
Confidence 9876
No 477
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.3e-39 Score=376.54 Aligned_cols=200 Identities=24% Similarity=0.448 Sum_probs=173.1
Q ss_pred CCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccEEEccCCccCcc-cHH
Q 000689 1098 IPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFAS-TIY 1176 (1350)
Q Consensus 1098 ~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~~VpQdp~LF~g-TIr 1176 (1350)
.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 345678899999999999875 999
Q ss_pred HHhccCCC--CCC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccCCCEEEEeCcCC
Q 000689 1177 ENIAYGHE--SAT----ESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATS 1250 (1350)
Q Consensus 1177 eNL~~~~~--~~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~p~ILlLDEaTS 1250 (1350)
|||.+... ..+ ++++.++++..++.+.. .....+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986421 122 22355556666554332 23345799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1251 ALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1251 aLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
+||+.+.+.+.+.|++.. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 58999999999999976 999999999999999999999765
No 478
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2e-39 Score=364.92 Aligned_cols=212 Identities=21% Similarity=0.358 Sum_probs=175.4
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhcc--CCCCccEEEECCccCCCCCHHHh-hc
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRF--YEPSSGRVMIDGKDIRKYNLKSL-RR 1159 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl--~~p~~G~I~iDG~di~~~~l~~l-R~ 1159 (1350)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 3699999999999999999999999999999999999 47999999999999988877654 45
Q ss_pred ccEEEccCCccCcc-cHHHHhccCCCC---------CC----HHHHHHHHHHhccHHHHhcCCCCccccccCCCC-CCCh
Q 000689 1160 HMAIVPQEPCLFAS-TIYENIAYGHES---------AT----ESEIIEAARLANADKFISSLPDGYKTFVGERGV-QLSG 1224 (1350)
Q Consensus 1160 ~i~~VpQdp~LF~g-TIreNL~~~~~~---------~t----d~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~-~LSg 1224 (1350)
.++||||+|.+|.+ |++||+.+.... .+ ++.+.++++..++.+. ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEE----------FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchh----------hcccccccCcCH
Confidence 69999999998876 899998653110 11 1223344444443211 1122222 4999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhhh--cCEEEEEeCCeEEEec
Q 000689 1225 GQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIRN--AHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1225 GQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~~--~DrI~Vl~~GrIvE~G 1301 (1350)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. +|+|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 47999999999999976 7999999999999999
Q ss_pred ChhHHh
Q 000689 1302 SHSHLL 1307 (1350)
Q Consensus 1302 t~~eLl 1307 (1350)
+++++-
T Consensus 228 ~~~~~~ 233 (243)
T TIGR01978 228 DVELAK 233 (243)
T ss_pred CHHHhc
Confidence 998654
No 479
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=354.34 Aligned_cols=201 Identities=33% Similarity=0.531 Sum_probs=169.8
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++. . .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 4789999999632 2 39999999999999999999999999999999999999999999999876654 357899
Q ss_pred EEccCCCcccc-cHHHHhhcCCC-CCC-----HHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHH
Q 000689 508 LVSQEPALFAT-TIKENILLGRP-DAD-----LNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARA 580 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~-~~~-----~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARa 580 (1350)
|++|++.+|.. |++||+.++.. ... .+++.++++.. |++........+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARV-----------GLAGLEKRLPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHc-----------CCHHHHhCCcccCCHHHHHHHHHHHH
Confidence 99999999975 99999987642 111 11223333333 44444555667899999999999999
Q ss_pred hcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 000689 581 MLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 581 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g 646 (1350)
++.+|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 38999999999999976 9999999999998764
No 480
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.1e-39 Score=360.04 Aligned_cols=215 Identities=33% Similarity=0.526 Sum_probs=182.7
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++++|++ +++|+|+||++.+||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 478999999974 359999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
|+||++.+|++ |++||+.++... .+..+.. ..+.+.+..+ |+.........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999975 999999876431 1111111 1223445554 444445566779999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++||||||++||+++++.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999998754 7999999999999866 999999999999999999998754
No 481
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=362.43 Aligned_cols=218 Identities=29% Similarity=0.524 Sum_probs=184.9
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-----PTSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~i~g~~~~~~--~~ 499 (1350)
.++++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 4889999999963 359999999999999999999999999999999999864 4899999999998653 45
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCC---CCHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPD---ADLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~---~~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+|++++|+||++.+|+.|++||+.++... .+.+ ++.++++.+++.+++. ...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 5678899999999999999999999876321 1112 2333444444433332 234567789999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. +|++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999998
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 755
No 482
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=363.79 Aligned_cols=218 Identities=31% Similarity=0.506 Sum_probs=182.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CCH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD--P---TSGQVLLDGHDIKS--LKL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~i~g~~~~~--~~~ 499 (1350)
+|+++||+++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 6899999999973 369999999999999999999999999999999999975 5 59999999998864 334
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCC--CC-CHH----HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRP--DA-DLN----EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~--~~-~~~----~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
..+++.++|++|++.+|+.|++||+.++.. .. ..+ ++.++++.+++. +++.......+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIW-------DEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCc-------cchhhHHhcCcccCCHHHH
Confidence 567789999999999998999999987521 11 111 112222222221 1233445667789999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDEL 651 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l 651 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+..++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999888
Q ss_pred Hhc
Q 000689 652 IAK 654 (1350)
Q Consensus 652 ~~~ 654 (1350)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 765
No 483
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=365.50 Aligned_cols=220 Identities=26% Similarity=0.427 Sum_probs=182.1
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCC---CcEEEECCeeCCCC-----C
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPT---SGQVLLDGHDIKSL-----K 498 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~---~G~i~i~g~~~~~~-----~ 498 (1350)
.|+++||+++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 6899999999963 36999999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhccEEEEccCCCcccc-cHHHHhhcCCCCCCH--H---HHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHH
Q 000689 499 LRWLRQQIGLVSQEPALFAT-TIKENILLGRPDADL--N---EIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQK 572 (1350)
Q Consensus 499 ~~~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~--~---~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqk 572 (1350)
...++++++|+||++.+|.. |++||+.++...... . ..........+.+.+..+ |++......+.+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 34567889999999998874 999999886421100 0 000000111223444444 555556777889999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+++.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999885 38999999999998754 9999999999999999998
Q ss_pred HH
Q 000689 650 EL 651 (1350)
Q Consensus 650 ~l 651 (1350)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 484
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-39 Score=363.21 Aligned_cols=218 Identities=28% Similarity=0.440 Sum_probs=185.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--CH
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDP-----TSGQVLLDGHDIKSL--KL 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~i~g~~~~~~--~~ 499 (1350)
.+.+++++++|+. .++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... ..
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 4889999999963 3699999999999999999999999999999999999987 799999999998643 34
Q ss_pred HHHhccEEEEccCCCcccccHHHHhhcCCCCC-----CHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHH
Q 000689 500 RWLRQQIGLVSQEPALFATTIKENILLGRPDA-----DLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQR 574 (1350)
Q Consensus 500 ~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~-----~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqr 574 (1350)
..+|+.++|++|++.+|..|+.|||.++.... ..+++.++++..++.+.+ ....++.+.+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEV-------KDKLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHHHH
Confidence 46778899999999999899999999864211 112344444444433222 223456778999999999
Q ss_pred HHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe--------CCEEEEe
Q 000689 575 IAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRK-ADVVAVLQ--------QGSVSEI 645 (1350)
Q Consensus 575 i~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~-~d~i~vl~--------~G~i~~~ 645 (1350)
++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778999999999998865 99999996 8999999
Q ss_pred cChHHHHhc
Q 000689 646 GTHDELIAK 654 (1350)
Q Consensus 646 g~~~~l~~~ 654 (1350)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999865
No 485
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=359.27 Aligned_cols=215 Identities=37% Similarity=0.542 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEE
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIG 507 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~ 507 (1350)
|+++|++|+|++ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 478999999974 369999999999999999999999999999999999999999999999999876654 367899
Q ss_pred EEccCCCcccc-cHHHHhhcCCCC--CCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 508 LVSQEPALFAT-TIKENILLGRPD--ADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 508 ~v~Q~~~lf~~-ti~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
||+|++.+|.+ |++||+.++... .+.....+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKE-----RVAEALDLV--QLEGYANRKPSQLSGGQQQRVAIARALVNE 148 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999965 999999875321 11111111 112233333 555556667789999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|+++||||||++||+.+.+.+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 149 PKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999999999999998753 8999999999999865 999999999999999999888754
No 486
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.1e-39 Score=374.77 Aligned_cols=204 Identities=25% Similarity=0.451 Sum_probs=174.0
Q ss_pred CccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccEEEEccCCCcccc-cHH
Q 000689 443 VRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFAT-TIK 521 (1350)
Q Consensus 443 ~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~ 521 (1350)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++|||||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999875 345678889999999999876 999
Q ss_pred HHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCCCCEeEEeccCCCCCH
Q 000689 522 ENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDS 599 (1350)
Q Consensus 522 eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~~~ililDE~ts~lD~ 599 (1350)
||+.+... ..+..+..+ .+.+.+..+ |+.........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 99987421 112222111 123344444 555556667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 600 ESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 600 ~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999885 58999999999999976 999999999999999999998754
No 487
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4e-39 Score=365.92 Aligned_cols=222 Identities=24% Similarity=0.400 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCC---ccEEEECCccCCCC-----C
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPS---SGRVMIDGKDIRKY-----N 1153 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~iDG~di~~~-----~ 1153 (1350)
-|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999964 36999999999999999999999999999999999999886 49999999998654 3
Q ss_pred HHHhhcccEEEccCCccCc-ccHHHHhccCCCC--------------CCHHHHHHHHHHhccHHHHhcCCCCccccccCC
Q 000689 1154 LKSLRRHMAIVPQEPCLFA-STIYENIAYGHES--------------ATESEIIEAARLANADKFISSLPDGYKTFVGER 1218 (1350)
Q Consensus 1154 l~~lR~~i~~VpQdp~LF~-gTIreNL~~~~~~--------------~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~ 1218 (1350)
...+|++++|+||++.+|. .|+++|+.++... ...+++.++++..++.+.+. ..
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAH-----------QR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHh-----------CC
Confidence 4567889999999999887 5999999865311 11234555666666554433 34
Q ss_pred CCCCChhHHHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEeCC
Q 000689 1219 GVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVIDDG 1295 (1350)
Q Consensus 1219 G~~LSgGQrQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~~G 1295 (1350)
..+||||||||++||||++.+|++|||||||++||+++.+.+.+.|++.. .|+|+|+|||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46799999999999999999999999999999999999999999999875 38999999999998754 9999999999
Q ss_pred eEEEecChhHHhhcCCCchhHHHHHH
Q 000689 1296 KVAELGSHSHLLKNNPDGCYARMIQL 1321 (1350)
Q Consensus 1296 rIvE~Gt~~eLl~~~~~g~y~~l~~~ 1321 (1350)
++++.|+++++- +....+++..
T Consensus 230 ~i~~~g~~~~~~----~~~~~~~~~~ 251 (262)
T PRK09984 230 HVFYDGSSQQFD----NERFDHLYRS 251 (262)
T ss_pred EEEEeCCHHHhc----cHHHHHHHhh
Confidence 999999999962 2345555543
No 488
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4.3e-38 Score=401.61 Aligned_cols=108 Identities=30% Similarity=0.498 Sum_probs=95.3
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHhccCC---CEEEEeCcCCCCCHHHHHHHHHHHHHhc-CCceEEEEecCchhhh
Q 000689 1210 GYKT-FVGERGVQLSGGQKQRVAIARAFVRKA---EIMLLDEATSALDAESERSVQEALDRAC-SGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1210 Gldt-~vge~G~~LSgGQrQrlaiARALLr~p---~ILlLDEaTSaLD~~te~~I~~~L~~~~-~g~TvI~IaHRlsti~ 1284 (1350)
|++. .++.....||||||||++|||+|+++| +++||||||++||+.+...+.+.|+++. +|.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5554 367777889999999999999999999 9999999999999999999999999875 5899999999999999
Q ss_pred hcCEEEEE------eCCeEEEecChhHHhhcCCCchhHHH
Q 000689 1285 NAHVIAVI------DDGKVAELGSHSHLLKNNPDGCYARM 1318 (1350)
Q Consensus 1285 ~~DrI~Vl------~~GrIvE~Gt~~eLl~~~~~g~y~~l 1318 (1350)
.||+|++| ++|+|++.|+++++.+. +.+.-.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~-~~s~t~~~ 936 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKV-EASYTGRY 936 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC-cccHHHHH
Confidence 99999999 79999999999999976 34433333
No 489
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.5e-39 Score=359.44 Aligned_cols=214 Identities=28% Similarity=0.397 Sum_probs=173.3
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCcEEEECCeeCCCCCHHHHh
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD---PTSGQVLLDGHDIKSLKLRWLR 503 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~i~g~~~~~~~~~~~r 503 (1350)
++|+||+|+|++.. .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999997532 3579999999999999999999999999999999999999 99999999999875 34578
Q ss_pred ccEEEEccCCCcccc-cHHHHhhcCCCCCCHHHHHHHHHHhchHH-HHhcCCCCccchhcCCCCCCChHHHHHHHHHHHh
Q 000689 504 QQIGLVSQEPALFAT-TIKENILLGRPDADLNEIEEAARVANAYS-FIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAM 581 (1350)
Q Consensus 504 ~~i~~v~Q~~~lf~~-ti~eNi~~g~~~~~~~~~~~~~~~~~~~~-~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal 581 (1350)
+.++|++|++.+|++ |++||+.++..........+..+.....+ .+..+ ++.....+...+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999987 99999987532110000001111111112 23332 444455567789999999999999999
Q ss_pred cCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCc-hhh-hhcCEEEEEeCCEEEEec
Q 000689 582 LKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRL-STI-RKADVVAVLQQGSVSEIG 646 (1350)
Q Consensus 582 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l-~~~-~~~d~i~vl~~G~i~~~g 646 (1350)
+++|++|||||||++||+.+.+.+.+.|+++. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998874 489999999998 455 459999999999999875
No 490
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.8e-39 Score=366.37 Aligned_cols=229 Identities=29% Similarity=0.469 Sum_probs=188.9
Q ss_pred EEEEEEEEECCCC------CCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCH--
Q 000689 1083 VELKHVDFSYPSR------PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNL-- 1154 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~------~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l-- 1154 (1350)
|+++||+++|+.. .+.++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8899999999731 02479999999999999999999999999999999999999999999999999987765
Q ss_pred -HHhhcccEEEccCCc--cC-cccHHHHhccCCC---CCCHHHHHHHHHHhccHHHHhcCCCCccc-cccCCCCCCChhH
Q 000689 1155 -KSLRRHMAIVPQEPC--LF-ASTIYENIAYGHE---SATESEIIEAARLANADKFISSLPDGYKT-FVGERGVQLSGGQ 1226 (1350)
Q Consensus 1155 -~~lR~~i~~VpQdp~--LF-~gTIreNL~~~~~---~~td~ei~~al~~a~l~~~I~~lp~Gldt-~vge~G~~LSgGQ 1226 (1350)
..+|+.++|+||++. ++ ..|+++|+.+... +.+.+ .....+++.+..+ |+++ ........|||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge 156 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGGQ 156 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChHH
Confidence 347889999999983 43 4699999864211 11111 1122334455544 5553 4456677899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecCh
Q 000689 1227 KQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSH 1303 (1350)
Q Consensus 1227 rQrlaiARALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~ 1303 (1350)
|||++|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 157 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 236 (268)
T PRK10419 157 LQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPV 236 (268)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCCh
Confidence 9999999999999999999999999999999999999998753 8899999999999975 999999999999999999
Q ss_pred hHHhhcCCCchhHHHHH
Q 000689 1304 SHLLKNNPDGCYARMIQ 1320 (1350)
Q Consensus 1304 ~eLl~~~~~g~y~~l~~ 1320 (1350)
+++... ++.|..-+.
T Consensus 237 ~~~~~~--~~~~~~~~~ 251 (268)
T PRK10419 237 GDKLTF--SSPAGRVLQ 251 (268)
T ss_pred hhccCC--CCHHHHHHH
Confidence 999854 666665554
No 491
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=322.10 Aligned_cols=228 Identities=31% Similarity=0.516 Sum_probs=192.3
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCC---------
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSL--------- 497 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~--------- 497 (1350)
.++++|+.++|++. .+|++||++.++|+.+.|+|.|||||||++++|.=+..|+.|+|.++|..|+-.
T Consensus 6 ~l~v~dlHK~~G~~---eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGEH---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhcccc---hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 58999999999743 499999999999999999999999999999999999999999999999987421
Q ss_pred ----CHHHHhccEEEEccCCCcccc-cHHHHhhcCCC---CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCCh
Q 000689 498 ----KLRWLRQQIGLVSQEPALFAT-TIKENILLGRP---DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSG 569 (1350)
Q Consensus 498 ----~~~~~r~~i~~v~Q~~~lf~~-ti~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSg 569 (1350)
..+.+|.+.|+|+|+..|++- ||.||+.-+.- ..+..+.. ..+..++.+. |+.......+..|||
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~-----e~Ae~~L~kV--Gi~ek~~~YP~~LSG 155 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAI-----ERAEKYLAKV--GIAEKADAYPAHLSG 155 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHH-----HHHHHHHHHh--CchhhhhcCccccCc
Confidence 134688999999999999965 99999864311 11222211 1223444444 887777788999999
Q ss_pred HHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 000689 570 GQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGT 647 (1350)
Q Consensus 570 Gqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~ 647 (1350)
||+||+||||||..+|+++++|||||||||+---.+.+.++++. .|||.++|||.+.+.++ +.+++.|.+|+|-|+|+
T Consensus 156 GQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE~G~ 235 (256)
T COG4598 156 GQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEEEGP 235 (256)
T ss_pred hHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecccCC
Confidence 99999999999999999999999999999999999999998885 69999999999999998 89999999999999999
Q ss_pred hHHHHhccCCcHHHHHH
Q 000689 648 HDELIAKGENGVYAKLI 664 (1350)
Q Consensus 648 ~~~l~~~~~~~~y~~l~ 664 (1350)
++++..++.+...+++.
T Consensus 236 P~qvf~nP~S~RlkqFl 252 (256)
T COG4598 236 PEQVFGNPQSPRLKQFL 252 (256)
T ss_pred hHHHhcCCCCHHHHHHH
Confidence 99999886555444443
No 492
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.9e-39 Score=368.97 Aligned_cols=214 Identities=30% Similarity=0.534 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhccc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHM 1161 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i 1161 (1350)
.|+++||+.+|.. +..+|+||||+|++||.+|++|||||||||++++|.|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999962 24799999999999999999999999999999999999999999999999998765 77889999
Q ss_pred EEEccCCccCcc-cHHHHhccCC-----C-CCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHH
Q 000689 1162 AIVPQEPCLFAS-TIYENIAYGH-----E-SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIAR 1234 (1350)
Q Consensus 1162 ~~VpQdp~LF~g-TIreNL~~~~-----~-~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiAR 1234 (1350)
|||||+|.++.. |++|||.+.. + ...++.+.+.++..++.+.- ......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHH
Confidence 999999998765 9999998642 1 12345677888888776521 2234569999999999999
Q ss_pred HhccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC-C-ceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1235 AFVRKAEIMLLDEATSALDAESERSVQEALDRACS-G-KTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1235 ALLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~-g-~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
||+.+|++|||||||++||+.+...+.+.|+++.+ | +||+++||.++.+.. ||||++|++|+++..|++++|...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999774 5 799999999999987 999999999999999999998654
No 493
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-39 Score=353.65 Aligned_cols=233 Identities=30% Similarity=0.497 Sum_probs=186.4
Q ss_pred EEEEEEEEECCCCC-CCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCC-C----CCcEEEECCeeCCCCCHHH
Q 000689 428 IELKHVDFSYPSRP-EVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYD-P----TSGQVLLDGHDIKSLKLRW 501 (1350)
Q Consensus 428 i~~~~v~f~y~~~~-~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~-~----~~G~i~i~g~~~~~~~~~~ 501 (1350)
++++|++.+|+... ...+++||||++++||++||||+|||||||+.+.|+|+.+ | .+|+|.++|.|+-.++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999997532 3569999999999999999999999999999999999998 4 5799999999999998775
Q ss_pred H---h-ccEEEEccCCCc-cc--ccHHHHhh----cCCCCCCHHHHHHHHHHhchHHHHhcCCCCcc---chhcCCCCCC
Q 000689 502 L---R-QQIGLVSQEPAL-FA--TTIKENIL----LGRPDADLNEIEEAARVANAYSFIIKLPDGFD---TQVRERGVQL 567 (1350)
Q Consensus 502 ~---r-~~i~~v~Q~~~l-f~--~ti~eNi~----~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~---t~~~~~g~~L 567 (1350)
+ | +.|++|||||.- ++ -||.+-|. .-....+.+|. .+. +.+.++.. |+. ......+.+|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea---~~~--a~~~L~~V--gi~~~~~~~~~YPhel 154 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEA---KER--AIELLELV--GIPDPERRLKSYPHEL 154 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHH---HHH--HHHHHHHc--CCCCHHHHHhhCCccc
Confidence 3 3 479999999842 22 25554443 21110011111 111 12222222 333 3567889999
Q ss_pred ChHHHHHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 000689 568 SGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSE 644 (1350)
Q Consensus 568 SgGqkqri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~ 644 (1350)
|||||||+.||-||+.+|++||.||||+|||..+.+.|.+.|+++. .|.|+|+||||+..+.. ||||+||..|+|+|
T Consensus 155 SGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE 234 (316)
T COG0444 155 SGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVE 234 (316)
T ss_pred CCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEE
Confidence 9999999999999999999999999999999999999999999986 48999999999999876 99999999999999
Q ss_pred ecChHHHHhccCCcHHHHHHHHH
Q 000689 645 IGTHDELIAKGENGVYAKLIRMQ 667 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~y~~l~~~~ 667 (1350)
.|+.++++.++.+.+.+.|++..
T Consensus 235 ~g~~~~i~~~P~HPYT~~Ll~s~ 257 (316)
T COG0444 235 EGPVEEIFKNPKHPYTRGLLNSL 257 (316)
T ss_pred eCCHHHHhcCCCChHHHHHHHhC
Confidence 99999999998777777777543
No 494
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-39 Score=356.09 Aligned_cols=215 Identities=33% Similarity=0.516 Sum_probs=178.2
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++||+++|+. . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.+
T Consensus 1 ~l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i 73 (232)
T PRK10771 1 MLKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPV 73 (232)
T ss_pred CeEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccE
Confidence 3789999999963 1 2399999999999999999999999999999999999999999999998765442 5689
Q ss_pred EEEccCCCcccc-cHHHHhhcCCC-CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcCC
Q 000689 507 GLVSQEPALFAT-TIKENILLGRP-DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKN 584 (1350)
Q Consensus 507 ~~v~Q~~~lf~~-ti~eNi~~g~~-~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~~ 584 (1350)
+|++|++.+|.+ |+.||+.++.. .....+ .....+.+.+..+ |++..+......||||||||++||||++++
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~ 147 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVRE 147 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999975 99999987531 111000 0011122233333 555555666679999999999999999999
Q ss_pred CCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHHHHhc
Q 000689 585 PAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDELIAK 654 (1350)
Q Consensus 585 ~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~l~~~ 654 (1350)
|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 148 QPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999874 38899999999999875 999999999999999999988754
No 495
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.2e-39 Score=362.21 Aligned_cols=214 Identities=29% Similarity=0.392 Sum_probs=176.1
Q ss_pred EEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcC--CCCCCcEEEECCeeCCCCCHHHH-hc
Q 000689 428 IELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERF--YDPTSGQVLLDGHDIKSLKLRWL-RQ 504 (1350)
Q Consensus 428 i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~--~~~~~G~i~i~g~~~~~~~~~~~-r~ 504 (1350)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+ ++|++|+|.++|.++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 478999999963 3699999999999999999999999999999999999 47999999999999988776554 45
Q ss_pred cEEEEccCCCcccc-cHHHHhhcCCCC---------CCHHHHHHHHHHhchHHHHhcCCCCccc-hhcCCCC-CCChHHH
Q 000689 505 QIGLVSQEPALFAT-TIKENILLGRPD---------ADLNEIEEAARVANAYSFIIKLPDGFDT-QVRERGV-QLSGGQK 572 (1350)
Q Consensus 505 ~i~~v~Q~~~lf~~-ti~eNi~~g~~~---------~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~-~LSgGqk 572 (1350)
.++||+|++.+|.+ |++||+.+.... .+.++.. ..+.+.+..+ |++. ....... +||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999998876 999999764211 0111111 1123333333 4442 2334444 5999999
Q ss_pred HHHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEecChH
Q 000689 573 QRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFM-IGRTTLVIAHRLSTIRK--ADVVAVLQQGSVSEIGTHD 649 (1350)
Q Consensus 573 qri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~itH~l~~~~~--~d~i~vl~~G~i~~~g~~~ 649 (1350)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999885 47999999999999975 7999999999999999987
Q ss_pred HH
Q 000689 650 EL 651 (1350)
Q Consensus 650 ~l 651 (1350)
++
T Consensus 231 ~~ 232 (243)
T TIGR01978 231 LA 232 (243)
T ss_pred Hh
Confidence 54
No 496
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-39 Score=362.98 Aligned_cols=203 Identities=28% Similarity=0.464 Sum_probs=172.8
Q ss_pred EEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHHhhcccE
Q 000689 1083 VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMA 1162 (1350)
Q Consensus 1083 I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~lR~~i~ 1162 (1350)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.+++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999964 3699999999999999999999999999999999999999999999999998642 34689
Q ss_pred EEccCCccCc-ccHHHHhccCCC--CCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHH
Q 000689 1163 IVPQEPCLFA-STIYENIAYGHE--SATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARA 1235 (1350)
Q Consensus 1163 ~VpQdp~LF~-gTIreNL~~~~~--~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARA 1235 (1350)
|+||++.+|. .|++||+.++.. .... +++.++++..++.+.. .....+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAE-----------KRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999999887 599999986421 1222 2345555555554433 33456799999999999999
Q ss_pred hccCCCEEEEeCcCCCCCHHHHHHHHHHHHHhc--CCceEEEEecCchhhhh-cCEEEEEe--CCeEEEecChh
Q 000689 1236 FVRKAEIMLLDEATSALDAESERSVQEALDRAC--SGKTTIVVAHRLSTIRN-AHVIAVID--DGKVAELGSHS 1304 (1350)
Q Consensus 1236 LLr~p~ILlLDEaTSaLD~~te~~I~~~L~~~~--~g~TvI~IaHRlsti~~-~DrI~Vl~--~GrIvE~Gt~~ 1304 (1350)
|+++|++|||||||++||+.+...+.+.|++.. .|+|+|+|||+++.+.. ||+|++|+ +|+|++.++.+
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 999999999999999999999999999999863 48999999999999865 99999998 59999988653
No 497
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-39 Score=361.77 Aligned_cols=207 Identities=29% Similarity=0.471 Sum_probs=174.8
Q ss_pred eEEEEEEEEECCCCCCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCHHHHhccE
Q 000689 427 LIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQI 506 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~~~~r~~i 506 (1350)
+|+++|++++|++ .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +..+
T Consensus 1 ml~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~ 72 (255)
T PRK11248 1 MLQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAER 72 (255)
T ss_pred CEEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcE
Confidence 3789999999964 3599999999999999999999999999999999999999999999999988642 2469
Q ss_pred EEEccCCCccc-ccHHHHhhcCCC--CCCHHHHHHHHHHhchHHHHhcCCCCccchhcCCCCCCChHHHHHHHHHHHhcC
Q 000689 507 GLVSQEPALFA-TTIKENILLGRP--DADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLK 583 (1350)
Q Consensus 507 ~~v~Q~~~lf~-~ti~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~~LSgGqkqri~iARal~~ 583 (1350)
+|++|++.+|. .|++||+.++.. .....+.. ..+.+.+..+ |++......+.+||||||||++|||||+.
T Consensus 73 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrl~laral~~ 145 (255)
T PRK11248 73 GVVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKV--GLEGAEKRYIWQLSGGQRQRVGIARALAA 145 (255)
T ss_pred EEEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999887 599999987532 11211111 1223444444 66555667788999999999999999999
Q ss_pred CCCEeEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 000689 584 NPAILLLDEATSALDSESEKLVQEALDRFM--IGRTTLVIAHRLSTIRK-ADVVAVLQ--QGSVSEIGTH 648 (1350)
Q Consensus 584 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~itH~l~~~~~-~d~i~vl~--~G~i~~~g~~ 648 (1350)
+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 146 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 146 NPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999873 48999999999999865 99999998 5999998764
No 498
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.8e-39 Score=363.85 Aligned_cols=224 Identities=30% Similarity=0.462 Sum_probs=185.7
Q ss_pred eEEEEEEEEECCCC------CCCccccceEEEEeCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCeeCCCCCH-
Q 000689 427 LIELKHVDFSYPSR------PEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKL- 499 (1350)
Q Consensus 427 ~i~~~~v~f~y~~~------~~~~~l~~i~~~i~~g~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~i~g~~~~~~~~- 499 (1350)
.|+++||+|+|+.. .++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 58999999999731 02469999999999999999999999999999999999999999999999999887665
Q ss_pred --HHHhccEEEEccCCC--cc-cccHHHHhhcCCCCCCHHHHHHHHHHhchHHHHhcCCCCccc-hhcCCCCCCChHHHH
Q 000689 500 --RWLRQQIGLVSQEPA--LF-ATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDT-QVRERGVQLSGGQKQ 573 (1350)
Q Consensus 500 --~~~r~~i~~v~Q~~~--lf-~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t-~~~~~g~~LSgGqkq 573 (1350)
..+++.++|++|++. ++ ..|+.||+.+...... ..........+.+.+..+ |+++ ..+..+.+|||||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~q 158 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQ 158 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHH
Confidence 346789999999983 44 3599999865321000 000111122334555555 7764 567788899999999
Q ss_pred HHHHHHHhcCCCCEeEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChHH
Q 000689 574 RIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI--GRTTLVIAHRLSTIRK-ADVVAVLQQGSVSEIGTHDE 650 (1350)
Q Consensus 574 ri~iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~itH~l~~~~~-~d~i~vl~~G~i~~~g~~~~ 650 (1350)
|++|||||+.+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 rl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 238 (268)
T PRK10419 159 RVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGD 238 (268)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhh
Confidence 99999999999999999999999999999999999998753 8999999999999975 99999999999999999999
Q ss_pred HHhc
Q 000689 651 LIAK 654 (1350)
Q Consensus 651 l~~~ 654 (1350)
+...
T Consensus 239 ~~~~ 242 (268)
T PRK10419 239 KLTF 242 (268)
T ss_pred ccCC
Confidence 8754
No 499
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6e-39 Score=377.93 Aligned_cols=213 Identities=27% Similarity=0.455 Sum_probs=180.3
Q ss_pred EEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCC----HHHhhcccE
Q 000689 1087 HVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYN----LKSLRRHMA 1162 (1350)
Q Consensus 1087 nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~----l~~lR~~i~ 1162 (1350)
|++++|++. . + |+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~~---~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGDF---S-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECCE---E-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 899999632 3 4 999999999999999999999999999999999999999999999986542 345688999
Q ss_pred EEccCCccCcc-cHHHHhccCCCCCCH----HHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhc
Q 000689 1163 IVPQEPCLFAS-TIYENIAYGHESATE----SEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFV 1237 (1350)
Q Consensus 1163 ~VpQdp~LF~g-TIreNL~~~~~~~td----~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALL 1237 (1350)
||||++.+|.. |++||+.++...... +.+.+.++..++.++ ......+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHL-----------LGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999976432221 234555555555443 33445689999999999999999
Q ss_pred cCCCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhcCCCch
Q 000689 1238 RKAEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKNNPDGC 1314 (1350)
Q Consensus 1238 r~p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~~~~g~ 1314 (1350)
++|++|||||||++||+.+.+.+.+.|++..+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++... +...
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~ 226 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS-PDLP 226 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC-cCcc
Confidence 99999999999999999999999999998653 7999999999999866 999999999999999999999876 4544
Q ss_pred hH
Q 000689 1315 YA 1316 (1350)
Q Consensus 1315 y~ 1316 (1350)
|.
T Consensus 227 ~~ 228 (354)
T TIGR02142 227 WL 228 (354)
T ss_pred cc
Confidence 54
No 500
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-39 Score=334.57 Aligned_cols=220 Identities=27% Similarity=0.459 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCCCcccceeEEEeCCCEEEEEcCCCCCHHHHHHHHhccCCCCccEEEECCccCCCCCHHH-hhcc
Q 000689 1082 EVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKS-LRRH 1160 (1350)
Q Consensus 1082 ~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~iDG~di~~~~l~~-lR~~ 1160 (1350)
-++++||+..|.. ..+|++|||++++||+|+++||||+||||++++|+|+.+|.+|+|.++|.||...+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 47999999999999999999999999999999999999999999999999999998765 6778
Q ss_pred cEEEccCCccCcc-cHHHHhccCCCCCCHHHHHHHHHHhccHHHHhcCCCCccccccCCCCCCChhHHHHHHHHHHhccC
Q 000689 1161 MAIVPQEPCLFAS-TIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRK 1239 (1350)
Q Consensus 1161 i~~VpQdp~LF~g-TIreNL~~~~~~~td~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQrQrlaiARALLr~ 1239 (1350)
|+||||...+|.. ||.|||..|.....+++-+ ...+++.-+-+| -|.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999965 9999999764222211111 111222223345 355556677889999999999999999999
Q ss_pred CCEEEEeCcCCCCCHHHHHHHHHHHHHhcC--CceEEEEecCchhhhh-cCEEEEEeCCeEEEecChhHHhhc
Q 000689 1240 AEIMLLDEATSALDAESERSVQEALDRACS--GKTTIVVAHRLSTIRN-AHVIAVIDDGKVAELGSHSHLLKN 1309 (1350)
Q Consensus 1240 p~ILlLDEaTSaLD~~te~~I~~~L~~~~~--g~TvI~IaHRlsti~~-~DrI~Vl~~GrIvE~Gt~~eLl~~ 1309 (1350)
|++|+|||||.+|-|.--+.|.++|+++.+ |.||++|-++...... +||.+||++|||+.+|+.++|..+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 6799999999998765 999999999999999999999876
Done!