Query 000689
Match_columns 1350
No_of_seqs 490 out of 4670
Neff 8.1
Searched_HMMs 29240
Date Tue Mar 26 16:47:32 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000689.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_460-463//hhsearch_pdb/000689hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1817.1 136.1 1235 83-1325 56-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1586.6 117.4 1229 84-1329 30-1277(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 868.0 72.0 580 741-1325 58-656 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 792.7 59.6 579 743-1326 33-629 (1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 741.0 71.2 566 748-1323 14-579 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 740.0 66.1 571 742-1324 22-592 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 737.0 66.2 571 746-1323 3-577 (578)
8 3qf4_A ABC transporter, ATP-bi 1.0 1 1 724.5 73.2 572 86-668 8-579 (587)
9 2yl4_A ATP-binding cassette SU 1.0 1 1 723.3 73.2 576 745-1325 7-586 (595)
10 3qf4_B Uncharacterized ABC tra 1.0 1 1 722.3 68.6 571 85-668 21-591 (598)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1817.15 Aligned_cols=1235 Identities=36% Similarity=0.588 Sum_probs=1063.3
Q ss_pred CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------CCCHHHHHHHH
Q ss_conf 88630189998942624589999999999997978899999999999852479----------------88614879999
Q 000689 83 DVTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSN----------------VNNMDKMMQEV 146 (1350)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~----------------~~~~~~~~~~~ 146 (1350)
...+++++++|+|+.+.++.+++++++++++.|++.|++..+++++++.+... ......+...+
T Consensus 56 ~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (1321)
T 4f4c_A 56 VVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDV 135 (1321)
T ss_dssp CSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHH
T ss_pred CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 56877999973156767899999999999999999999999999999999701000145430003443100168999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999809924471368822799999987999999999999
Q 000689 147 LKYAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKL 226 (1350)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~~~~~D~~~i~~~~~~~~ 226 (1350)
..+++++++++++.+++.+++.+||.++++|+..++|.++|+|++++|++|||++ ++|++++|+++|++.+++.+.+.+
T Consensus 136 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~~l 214 (1321)
T 4f4c_A 136 MNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGDKI 214 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999978898998799-848999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCH
Q ss_conf 99998999999999999999698999999999999999999999999999999999999999999998029999986538
Q 000689 227 GNFIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGE 306 (1350)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~~i~tIk~f~~e 306 (1350)
+.++..+.+++++++++|+++|++++++++++|++.++..++.++.++..++.++..++..+.+.|.++||++||+|++|
T Consensus 215 ~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e 294 (1321)
T 4f4c_A 215 GMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGL 294 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999899999999999999999999999999999999999999999999999839999982142
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999988889999999999999999999999981056877999999999999999999999
Q 000689 307 SKALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAP 386 (1350)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 386 (1350)
+.+.++|.+..++..+...+.....++..++..++.++.+++++|+|++++.+|.++.|.+++++.++.....++..+..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~ 374 (1321)
T 4f4c_A 295 RYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGP 374 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999995998699999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999999999882499988888788667897530999978898899999754110279972898999986999
Q 000689 387 SISAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSG 466 (1350)
Q Consensus 387 ~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sG 466 (1350)
.+..+.++..+++|++++++.+++.+.....+....+..|.|+|+||+|+||++++.++|+|+||++++|++++||||||
T Consensus 375 ~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 375 QLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 99999999999999999971785345666556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 93899999996287799748999996078888888743478883678765012899963299999998999999994339
Q 000689 467 SGKSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAY 546 (1350)
Q Consensus 467 sGKSTl~~~l~~~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 546 (1350)
||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||+||+++++++++++||+.|+++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH
Q ss_conf 99950999832120089999896799999999983279987687266778798999999999998608976999815913
Q 000689 547 SFIIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLS 626 (1350)
Q Consensus 547 ~~i~~lp~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~tvi~itH~~~ 626 (1350)
+||..||+||+|.+||+|.+|||||||||+||||+|++|+|||||||||+||+++|+.++++++++.+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CC-
Q ss_conf 5530398999849879885395789832689189999999999657532101358899986667888732124887-88-
Q 000689 627 TIRKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNARKSSARPSSARNSVSSPIIARNSS-YG- 704 (1350)
Q Consensus 627 ~~~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 704 (1350)
+++.||+|++|++|+|+|+|+|+||+++ +|.|++++..|...........................+......+ ..
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~--~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQ--QGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDD 692 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTT--TCHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8986898999639965136899999985--32799999962212222332334433223211122222342222222110
Q ss_pred CCCCCCCCCCCCCCCCCCC-C-CCCC-CC----HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8976544567766765566-5-6789-72----13456665442389999987403359999999999999999899999
Q 000689 705 RSPYSRRLSDFSTSDFSLS-L-DATY-PS----YRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFA 777 (1350)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~-~-~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~ 777 (1350)
.....+............. . .... .. ...+.......+..+++++.+.++.|+.++++.+++++.+...+.++
T Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~ 772 (1321)
T 4f4c_A 693 IMNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYS 772 (1321)
T ss_dssp -----------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22111013212456774025777531540389999999970786310999999987789999999999999999999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999982996367799999999999999999999999999999999999999999999999981895432335679
Q 000689 778 YVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENE 857 (1350)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~ 857 (1350)
+++..+++.+...... .......|.+++++++++..++.+++.+++.+.+.++..++|.++|++++++|++|||.++++
T Consensus 773 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~ 851 (1321)
T 4f4c_A 773 VFFTSFMNVFAGNPAD-FLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNA 851 (1321)
T ss_dssp HHHHHHHHHTSSCSST-TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGC
T ss_pred HHHHHHHHHHCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 9999999875179345-566789999999999999999999999999999999999999999888734993332167888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 67999999954999999998879999999999999999999898999999999999999999999999854769999999
Q 000689 858 SARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAH 937 (1350)
Q Consensus 858 ~G~i~~rl~~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~ 937 (1350)
+|++++|+++|++.++..++..+..++..++.+++.++++++++|.+++++++++|++++..++..+..+....+..+..
T Consensus 852 ~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (1321)
T 4f4c_A 852 SGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEF 931 (1321)
T ss_dssp HHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 48888502505999999999999999998653777702213786899999999888999999999999999999999998
Q ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999987229999995128999999999997899999999999965589999999999999999999998707787
Q 000689 938 SKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISD 1017 (1350)
Q Consensus 938 ~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~ 1017 (1350)
++...++.|++.|+++||+|+.++.+.++|.+..+...+...+.....+...++...+.++..++++|+|..++..+..+
T Consensus 932 ~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~ 1011 (1321)
T 4f4c_A 932 ADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPT 1011 (1321)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 88988999999627988861414889999999999999999999999999999999999999999998757887537654
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
Q ss_conf 8999--99999999999999999988999999999999999984354568999999999999998728999789988999
Q 000689 1018 FSKT--IRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSR 1095 (1350)
Q Consensus 1018 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~ 1095 (1350)
.+.. +.++..+.....++.......+.+.+...+++|+.++++.+++.+..... ..+++..|.|+|+||+|+||++
T Consensus 1012 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~g~I~f~nVsf~Y~~~ 1089 (1321)
T 4f4c_A 1012 MQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLA--GEKKKLYGKVIFKNVRFAYPER 1089 (1321)
T ss_dssp SCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCC--SBCCCCCCCEEEEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCEEEEEEEEEECCCC
T ss_conf 21478999999998778899999999999999999999899986076657776677--8788888818999879857999
Q ss_pred CCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCH
Q ss_conf 99883211028984898999995999978899999951378995379999951789997876211188736776675458
Q 000689 1096 PDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTI 1175 (1350)
Q Consensus 1096 ~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTI 1175 (1350)
++.+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+|||
T Consensus 1090 ~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTI 1169 (1321)
T 4f4c_A 1090 PEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSI 1169 (1321)
T ss_dssp CSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEH
T ss_pred CCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCH
T ss_conf 98821245169988989999989999819999999956863899789999998654999999854599878997327239
Q ss_pred HHHHCCCC--CCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf 88861399--9999999999999825189996099875431149999899369999999998214998889837677889
Q 000689 1176 YENIAYGH--ESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALD 1253 (1350)
Q Consensus 1176 reNL~~~~--~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD 1253 (1350)
||||.+|. ++++|+|+++|++.+++++||++||+||||.|||+|.+||||||||||||||+||+|+|||||||||+||
T Consensus 1170 reNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD 1249 (1321)
T 4f4c_A 1170 AENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALD 1249 (1321)
T ss_dssp HHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTT
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCC
T ss_conf 99974549999999999999999829849997176789998238891569999999999999971799899968111578
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 898999999999854996399981591266403889999498697806946774119995359999974202
Q 000689 1254 AESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1254 ~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
++||+.|+++|++.++|||+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++||+.|...
T Consensus 1250 ~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~--~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1250 TESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE--KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp SHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC--C-------------
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHC
T ss_conf 99999999999997399989996068999996999999989899998888999849--80999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1586.63 Aligned_cols=1229 Identities=41% Similarity=0.693 Sum_probs=1053.9
Q ss_pred CCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------C-C-------HHHHHHHHHH
Q ss_conf 86301899989426245899999999999979788999999999998524798-------8-6-------1487999999
Q 000689 84 VTPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNV-------N-N-------MDKMMQEVLK 148 (1350)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~-------~-~-------~~~~~~~~~~ 148 (1350)
..+++++++++|..+.++.+++++++++++.+++.|+++.+++.+++.+.... . . .......+..
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (1284)
T 3g5u_A 30 KPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTT 109 (1284)
T ss_dssp ---CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66656999998726579999999999999999999999999999999986134443322222211111002446889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999980992447136882279999998799999999999999
Q 000689 149 YAFYFLVVGAAIWASSWAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGN 228 (1350)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~~~~~D~~~i~~~~~~~~~~ 228 (1350)
+++++++++++.+++.+++.+++.+.++++..++|.++|++++++|++|||++ ++|++++|+++|++.+++.++..++.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 110 YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999986998997568-87789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
Q ss_conf 99899999999999999969899999999999999999999999999999999999999999999802999998653899
Q 000689 229 FIHYLATFVTGFAVGFSAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESK 308 (1350)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~~i~tIk~f~~e~~ 308 (1350)
++..++++++.++++++++|++++++++++|+++++..++.+..++..++.++..++..+.+.|.++|+++||+|++|+.
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998888999999999999999999999998105687799999999999999999999999
Q 000689 309 ALQAYSSALKVAQRLGYKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSI 388 (1350)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 388 (1350)
+.++|.+..++..+...+.....++..++..++.++.+++++|+|++++..|.++.|.++++++.......++.++...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCC
Q ss_conf 99999999999999988249998888878866789753099997889889999975411027997289899998699993
Q 000689 389 SAFAKAKVAAAKIFRIIDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSG 468 (1350)
Q Consensus 389 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsG 468 (1350)
..+.++..+++|++++++.++++++....+..+++..|.|+++|++|+||++++.++|+|+||++++|++++||||||||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsG 428 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCG 428 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCC
T ss_conf 99999999999999997289867766656777777777189999899769999871012545897599889998999997
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHH
Q ss_conf 89999999628779974899999607888888874347888367876501289996329999999899999999433999
Q 000689 469 KSTVVSLIERFYDPTSGQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSF 548 (1350)
Q Consensus 469 KSTl~~~l~~~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~ 548 (1350)
||||+++|.|+|+|++|+|.+||.|+++++.+++|++++||+|+|++|++||+|||.+|.++.++++++++++.++++++
T Consensus 429 KSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~ 508 (1284)
T 3g5u_A 429 KSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDF 508 (1284)
T ss_dssp HHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 99999998078899973899999987757999998654898688753776699997457989999999999998296999
Q ss_pred HHCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHH
Q ss_conf 95099983212008999989679999999998327998768726677879899999999999860897699981591355
Q 000689 549 IIKLPDGFDTQVRERGVQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTI 628 (1350)
Q Consensus 549 i~~lp~g~~t~~~~~g~~LSgGqkqri~lARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~ 628 (1350)
+..+|+|++|.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+++.++.+.+++|+|+||||++++
T Consensus 509 i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i 588 (1284)
T 3g5u_A 509 IMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTV 588 (1284)
T ss_dssp HHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 97465633450147878659999999999999952999899979877779999999999999973999899994077899
Q ss_pred HHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 303989998498798853957898326891899999999996575321013-5889998666788873212488788897
Q 000689 629 RKADVVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETALNNAR-KSSARPSSARNSVSSPIIARNSSYGRSP 707 (1350)
Q Consensus 629 ~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 707 (1350)
..||+|++|++|++++.|+|++++++ ++.|.+++..+....+....... ................ . .....+..
T Consensus 589 ~~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~ 663 (1284)
T 3g5u_A 589 RNADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDS--G-SSLIRRRS 663 (1284)
T ss_dssp TTCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC----------------------------------------
T ss_pred HCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--C-CCCCCCCC
T ss_conf 74998999989999997889999867--8779999997430022111333333222223443333333--3-20003454
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65445677667655665678972134566654423899999874033599999999999999998999999999999998
Q 000689 708 YSRRLSDFSTSDFSLSLDATYPSYRHEKLAFKEQASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVY 787 (1350)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~ 787 (1350)
..... ..+... . ......+..........+++++++.++.|+++++++++.++.+.+.+++++++..+++.+
T Consensus 664 ~~~~~---~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 735 (1284)
T 3g5u_A 664 TRKSI---CGPHDQ---D--RKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVF 735 (1284)
T ss_dssp ----------------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC---CCCCCC---C--CCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 33344---564223---3--211024555313662589999998451579999999999999999999999999999998
Q ss_pred CCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 29963-67799999999999999999999999999999999999999999999999981895432335679679999999
Q 000689 788 YNPDH-AYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLA 866 (1350)
Q Consensus 788 ~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~ 866 (1350)
..... .........|..++++++++..++.+++.+++.+.+.++..++|.++|++++++|++||+.+.+++|++++|++
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~ 815 (1284)
T 3g5u_A 736 TNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLA 815 (1284)
T ss_dssp HSSCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHH
T ss_conf 55685033677999999999999999999999999999999999999999999999983998887578998899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54999999998879999999999999999999898999999999999999999999999854769999999999999999
Q 000689 867 LDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGE 946 (1350)
Q Consensus 867 ~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 946 (1350)
+|++.++..++..+..++..+..++..+++++.++|.+++++++.+|+++++.+++.++.+....+..+........+.|
T Consensus 816 ~D~~~i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 895 (1284)
T 3g5u_A 816 NDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATE 895 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999996999999999999999999999999999999999999999999999
Q ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 87229999995128999999999997899999999999965589999999999999999999998707787899999999
Q 000689 947 AIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFM 1026 (1350)
Q Consensus 947 ~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~ 1026 (1350)
++.|+++||+|+.+..+.++|.+..+...+...+.....+...++.+.+.++.+++.+|+|.+++..|.++++.++.++.
T Consensus 896 ~l~gi~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~ 975 (1284)
T 3g5u_A 896 AIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFS 975 (1284)
T ss_dssp HHTTCTTTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHH
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 99889999984659999999999999999999999999999999999999999999999999999909806999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 99999999999998899999999999999998435456899999999999999872899978998899999883211028
Q 000689 1027 VLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSL 1106 (1350)
Q Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl 1106 (1350)
.+.....++.......+.+.++..++.|+.++++.+++.++..... ..+....|.|+|+||+|+|+++++.++|+|+||
T Consensus 976 ~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl 1054 (1284)
T 3g5u_A 976 AIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQG-LKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSL 1054 (1284)
T ss_dssp HHHHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSC-CCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCEEECCEEE
T ss_conf 9999999999999999999999999999999983887666655566-545677785799998997799998700203059
Q ss_pred EEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCC--
Q ss_conf 984898999995999978899999951378995379999951789997876211188736776675458888613999--
Q 000689 1107 RARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHE-- 1184 (1350)
Q Consensus 1107 ~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~-- 1184 (1350)
+|++||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||||.+|++||+|||.++.+
T Consensus 1055 ~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~ 1134 (1284)
T 3g5u_A 1055 EVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSR 1134 (1284)
T ss_dssp EECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSC
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCC
T ss_conf 97699889998899997899999994686789977989999800078999970268987787406666999974668778
Q ss_pred CCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH
Q ss_conf 99999999999982518999609987543114999989936999999999821499888983767788989899999999
Q 000689 1185 SATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEAL 1264 (1350)
Q Consensus 1185 ~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L 1264 (1350)
..++++++++++.++++++++++|+||||.+||+|.+||||||||+|||||++++|+|||||||||+||+++++.|++.|
T Consensus 1135 ~~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l 1214 (1284)
T 3g5u_A 1135 VVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEAL 1214 (1284)
T ss_dssp CCCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf 99999999999983959999727042456117888933899999999999997499999986875557999999999999
Q ss_pred HHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 98549963999815912664038899994986978069467741199953599999742024540
Q 000689 1265 DRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTHSQV 1329 (1350)
Q Consensus 1265 ~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~~~~~ 1329 (1350)
++..+|+|+|+||||++++..||||+||++|+++|+|+|++|+++ +|.|++||+.|.....|.
T Consensus 1215 ~~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~g~y~~l~~~q~~~~~~~ 1277 (1284)
T 3g5u_A 1215 DKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ--KGIYFSMVSVQAGAKRSY 1277 (1284)
T ss_dssp HHHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS--CSHHHHHHHHHC------
T ss_pred HHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCCCCC
T ss_conf 986799989999558799980998999989989997789999847--777999999976132221
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=867.97 Aligned_cols=580 Identities=35% Similarity=0.590 Sum_probs=527.6
Q ss_pred HHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------------------CHHHHHHHHHH
Q ss_conf 23899999874033-599999999999999998999999999999998299------------------63677999999
Q 000689 741 QASSFWRLAKMNSP-EWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNP------------------DHAYMIREIAK 801 (1350)
Q Consensus 741 ~~~~~~~~~~~~~~-~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~ 801 (1350)
++.++++++.|..+ +++.++++.+++++.|+..|++.++++.+++.+... ........+..
T Consensus 58 ~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1321)
T 4f4c_A 58 NKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMN 137 (1321)
T ss_dssp SCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 87799997315676789999999999999999999999999999999970100014543000344310016899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999981895432335679679999999549999999988799
Q 000689 802 YCYLLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQ 881 (1350)
Q Consensus 802 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~ 881 (1350)
+++.+++++++..++.+++.+++.+++++...++|.++|++++++|++|||+ +++|++++|+++|++.+++.+...+.
T Consensus 138 ~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~--~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 138 VVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDT--NHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH--TCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999997889899879--98489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 99999999999999999898999999999999999999999999854769999999999999999872299999951289
Q 000689 882 VIVQNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSEL 961 (1350)
Q Consensus 882 ~~i~~~~~~~~~l~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~ 961 (1350)
.++..++.+++.++++++++|.+++++++++|+.++...+..+..++..++.++..++....+.|++.|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997899999999999965589999999999999999999998707787899999999999999999999988
Q 000689 962 MIVGLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTL 1041 (1350)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1350)
.+.++|.+..+...+...+.....+...++..++.++.+++++|+|.+++..|.+++|.+++++.++.....++..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCC
Q ss_conf 99999999999999998435456899999999999999872899978998899999883211028984898999995999
Q 000689 1042 APDFIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSG 1121 (1350)
Q Consensus 1042 ~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SG 1121 (1350)
...+.++..+++|+.++++.+++.+...... ..+....|.|+|+||+|+||++++.++|+|+||+|+|||++||||+||
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSSKAG-RKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSSSCC-CCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 9999999999999999971785345666556-567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCH
Q ss_conf 97889999995137899537999995178999787621118873677667545888861399999999999999982518
Q 000689 1122 CGKSSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANAD 1201 (1350)
Q Consensus 1122 SGKSTL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~s~~ei~~al~~a~l~ 1201 (1350)
||||||+++|+|+|+|++|+|++||+|++++++++||++|+||||||+||++||||||.+|+++++++++++||+.++++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCH
Q ss_conf 99960998754311499998993699999999982149988898376778898989999999998549963999815912
Q 000689 1202 KFISSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLS 1281 (1350)
Q Consensus 1202 ~~I~~lp~Gldt~vge~G~~LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ 1281 (1350)
+||+.||+||||.|||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+|||+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 66403889999498697806946774119995359999974202
Q 000689 1282 TIRNAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1282 ti~~~DrI~vL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
++++||+|+||++|+|+|+|+|+||+++ +|.|++|++.|...
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~--~g~y~~l~~~q~~~ 656 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQ--QGLYYDLVTAQTFT 656 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTT--TCHHHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHH--HHHHHHHHHHHHCC
T ss_conf 8986898999639965136899999985--32799999962212
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=792.73 Aligned_cols=579 Identities=37% Similarity=0.631 Sum_probs=517.9
Q ss_pred HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-----------------HHHHHHHHHHHH
Q ss_conf 89999987403-359999999999999999899999999999999829963-----------------677999999999
Q 000689 743 SSFWRLAKMNS-PEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDH-----------------AYMIREIAKYCY 804 (1350)
Q Consensus 743 ~~~~~~~~~~~-~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~ 804 (1350)
..+++++.+.. .+|+.++++++++++.++..++++++++.+++.+..... .........+++
T Consensus 33 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (1284)
T 3g5u_A 33 VSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAY 112 (1284)
T ss_dssp CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 56999998726579999999999999999999999999999999986134443322222211111002446889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999981895432335679679999999549999999988799999
Q 000689 805 LLIGLSSAELLFNTLQHSFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIV 884 (1350)
Q Consensus 805 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~~~i 884 (1350)
++++++++..++.+++.+++.+.+.+...++|.++|++++++|++||++ +++|++++|+++|++.++..++..+..++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~--~~~G~l~sr~~~D~~~i~~~~~~~~~~~~ 190 (1284)
T 3g5u_A 113 YYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDV--HDVGELNTRLTDDVSKINEGIGDKIGMFF 190 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHS--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999998699899756--88778999999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 99999999999999898999999999999999999999999854769999999999999999872299999951289999
Q 000689 885 QNTALMLVACTAGFVLQWRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIV 964 (1350)
Q Consensus 885 ~~~~~~~~~l~~~~~~~~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~ 964 (1350)
..++.+++.++++++++|++++++++++|++++...+..+..+...++.++..++...++.|++.|+++||+|+.|+.+.
T Consensus 191 ~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~ 270 (1284)
T 3g5u_A 191 QAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKEL 270 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_conf 99999999999999998999999999999999999999999999999999999999999999997879999846539999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997899999999999965589999999999999999999998707787899999999999999999999988999
Q 000689 965 GLFSSNLQTPLRRCFWKGQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPD 1044 (1350)
Q Consensus 965 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1044 (1350)
++|.+..+...+...+.....+...++..++.++.+++++|+|.+++..|.+++|.+++++..+.....++.........
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (1284)
T 3g5u_A 271 ERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEA 350 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999929988999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCH
Q ss_conf 99999999999998435456899999999999999872899978998899999883211028984898999995999978
Q 000689 1045 FIKGGRAMRSVFDLLDRKTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGK 1124 (1350)
Q Consensus 1045 ~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGK 1124 (1350)
+.++..++.|++++++.+++.++..... ..+....|.|+|+||+|+|+++++.++|+|+||+|++||++||||+|||||
T Consensus 351 ~~~~~~a~~ri~~~l~~~~~~~~~~~~~-~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGK 429 (1284)
T 3g5u_A 351 FANARGAAYEVFKIIDNKPSIDSFSKSG-HKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK 429 (1284)
T ss_dssp HHHHHHHHHHHHHTTSCCCCCSSCCSSC-CCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCH
T ss_conf 9999999999999972898677666567-777777771899998997699998710125458975998899989999979
Q ss_pred HHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHH
Q ss_conf 89999995137899537999995178999787621118873677667545888861399999999999999982518999
Q 000689 1125 SSVIALVQRFYEPSSGRVMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFI 1204 (1350)
Q Consensus 1125 STL~~lL~rl~~p~~G~I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~s~~ei~~al~~a~l~~~I 1204 (1350)
|||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||||||.+|++||+|||.++.+++++++++++++.+++++++
T Consensus 430 STl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i 509 (1284)
T 3g5u_A 430 STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFI 509 (1284)
T ss_dssp HHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHH
T ss_conf 99999980788999738999999877579999986548986887537766999974579899999999999982969999
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHH
Q ss_conf 60998754311499998993699999999982149988898376778898989999999998549963999815912664
Q 000689 1205 SSLPDGYKTFVGERGVQLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIR 1284 (1350)
Q Consensus 1205 ~~lp~Gldt~vge~G~~LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~ 1284 (1350)
+++|+|+||.+||+|.+||||||||+|||||++++|+|||||||||+||+++|+.+++.++...+|+|+|+||||++++.
T Consensus 510 ~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i~ 589 (1284)
T 3g5u_A 510 MKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVR 589 (1284)
T ss_dssp HHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHH
T ss_conf 74656334501478786599999999999999529998999798777799999999999999739998999940778997
Q ss_pred HCCEEEEEECCEEEEECCHHHHHHCCCCCHHHHHHHHHHHCC
Q ss_conf 038899994986978069467741199953599999742024
Q 000689 1285 NAHVIAVIDDGKVAELGSHSHLLKNNPDGCYARMIQLQRFTH 1326 (1350)
Q Consensus 1285 ~~DrI~vL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~~ 1326 (1350)
.||+|+||++|+++|.|+|++|++. +|.|++++..|....
T Consensus 590 ~~d~i~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~~~~~~~ 629 (1284)
T 3g5u_A 590 NADVIAGFDGGVIVEQGNHDELMRE--KGIYFKLVMTQTAGN 629 (1284)
T ss_dssp TCSEEEECSSSCCCCEECHHHHHHT--TSHHHHHHHHTC---
T ss_pred CCCEEEEEECCEEEEECCHHHHHHC--CCHHHHHHHHHHHCC
T ss_conf 4998999989999997889999867--877999999743002
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=741.02 Aligned_cols=566 Identities=26% Similarity=0.397 Sum_probs=414.6
Q ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98740335999999999999999989999999999999982996367799999999999999999999999999999999
Q 000689 748 LAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFWDIV 827 (1350)
Q Consensus 748 ~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 827 (1350)
++++.++.|+.+.+++++.++.+++..+.++++..+++....... ......+.++++++.++..++.+++.++..+.
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (587)
T 3qf4_A 14 LARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARGD---FSLVLKTGILMLIVALIGAVGGIGCTVFASYA 90 (587)
T ss_dssp GGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999873698---79999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998189543233567967999999954999999998879999999999999999999898999999
Q 000689 828 GENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRLALV 907 (1350)
Q Consensus 828 ~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~~~l~li 907 (1350)
+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.++++
T Consensus 91 ~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 168 (587)
T 3qf4_A 91 SQNFGADLRRDLFRKVLSFSISNVNR--FHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSSV 168 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHHH--SCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999997889799765--8889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999985476999999999999999987229999995128999999999997899999999999965
Q 000689 908 LIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQIAGS 987 (1350)
Q Consensus 908 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 987 (1350)
+++.+|++.+...+..+..++..++.++..++....+.|++.|+++||+|+.++.+.++|.+..+...+...+.......
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (587)
T 3qf4_A 169 LIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIVF 248 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998559999986214999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 58999999999999999999999870778789999999999999999999998899999999999999998435456899
Q 000689 988 GYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTEIEP 1067 (1350)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 1067 (1350)
..++..++..+..++++|+|.+++..|.+++|.++++..+......++..+......+.++..+++|+.++++.+++.++
T Consensus 249 ~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 328 (587)
T 3qf4_A 249 ALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIEE 328 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984993899999999999999999999999999999999999999999768976578
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCC
Q ss_conf 99999999999987289997899889999988321102898489899999599997889999995137899537999995
Q 000689 1068 DDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVMIDGK 1147 (1350)
Q Consensus 1068 ~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~idG~ 1147 (1350)
.. ... ..+...+.|+++||+|+|+.. +.++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+|.+||+
T Consensus 329 ~~-~~~-~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g~ 405 (587)
T 3qf4_A 329 AD-NAL-ALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDEL 405 (587)
T ss_dssp CT-TCB-CCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESSS
T ss_pred CC-CCC-CCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf 87-765-668888807997889984899-976421117998699889998999997999999992786699867989999
Q ss_pred CCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 17899978762111887367766754588886139999999999999998251899960998754311499998993699
Q 000689 1148 DIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQLSGGQK 1227 (1350)
Q Consensus 1148 di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~LSgGQk 1227 (1350)
|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.++++++++.+|+|+||.++++|.+||||||
T Consensus 406 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGqr 485 (587)
T 3qf4_A 406 DVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQK 485 (587)
T ss_dssp BGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHHH
T ss_pred ECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHHH
T ss_conf 83407899998413897789867675599998524889999999999999684999975653121275189899299999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999998214998889837677889898999999999854996399981591266403889999498697806946774
Q 000689 1228 QRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELGSHSHLL 1307 (1350)
Q Consensus 1228 QrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~Gt~~eLl 1307 (1350)
||+|||||++++|+|||||||||+||+++++.|++.+++..+|+|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 486 Qrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el~ 565 (587)
T 3qf4_A 486 QRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKELL 565 (587)
T ss_dssp HHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972999999979754479999999999999867999899982276889819989999899899978899998
Q ss_pred HCCCCCHHHHHHHHHH
Q ss_conf 1199953599999742
Q 000689 1308 KNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1308 ~~~~~g~y~~l~~~q~ 1323 (1350)
+. ++.|+++++.|.
T Consensus 566 ~~--~~~~~~~~~~~~ 579 (587)
T 3qf4_A 566 EH--CKPYREIYESQF 579 (587)
T ss_dssp HH--CHHHHHHHHHHC
T ss_pred HC--CCHHHHHHHHHH
T ss_conf 67--839999999984
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=739.97 Aligned_cols=571 Identities=27% Similarity=0.439 Sum_probs=473.9
Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999998740335999999999999999989999999999999982996367799999999999999999999999999
Q 000689 742 ASSFWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQH 821 (1350)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 821 (1350)
...+++++++.++.++.++.++++.++.+++..+.+++++.+++........ ..+..++.+++++.++..++.+++.
T Consensus 22 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (598)
T 3qf4_B 22 TATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRF---DLLPRYMLILGTIYALTSLLFWLQG 98 (598)
T ss_dssp HHHHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCG---GGHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999999999999999999999999999999736888---9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998189543233567967999999954999999998879999999999999999999898
Q 000689 822 SFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQ 901 (1350)
Q Consensus 822 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~ 901 (1350)
++..+.+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.++..+...+..++..++.+++.+++++.++
T Consensus 99 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 176 (598)
T 3qf4_B 99 KIMLTLSQDVVFRLRKELFEKLQRVPVGFFDR--TPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVN 176 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHH--SCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997799999768--8889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999985476999999999999999987229999995128999999999997899999999
Q 000689 902 WRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 902 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1350)
|.+++++++++|+.++...+..+..++..+..++..++..+.+.|.+.|+++||+|+.++.+.++|.+..+...+...+.
T Consensus 177 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 256 (598)
T 3qf4_B 177 VILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKA 256 (598)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999997379999974870999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99996558999999999999999999999870778789999999999999999999998899999999999999998435
Q 000689 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~ 1061 (1350)
....+....+..++..+..++++|+|++++..|.+++|.+++++.+......++..+......+..+..+++|+.++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 336 (598)
T 3qf4_B 257 QIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDL 336 (598)
T ss_dssp HHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985997899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 45689999999999999987289997899889999988321102898489899999599997889999995137899537
Q 000689 1062 KTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGR 1141 (1350)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1141 (1350)
+++.+.. ... ..+...+.|+++||+|+|+. +.++|+|+||+|++||++|||||||||||||+++|.|+|+|++|+
T Consensus 337 ~~~~~~~--~~~-~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 411 (598)
T 3qf4_B 337 EEEKDDP--DAV-ELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQ 411 (598)
T ss_dssp CCCCCCS--SCC-CCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEE
T ss_pred CCCCCCC--CCC-CCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEE
T ss_conf 8777777--777-77777771899998997799--986012227998699889998999996999999994585799808
Q ss_pred EEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999517899978762111887367766754588886139999999999999998251899960998754311499998
Q 000689 1142 VMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1142 I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
|.+||.|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.++++++++.+|+||||.++++|.+
T Consensus 412 i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~ 491 (598)
T 3qf4_B 412 ILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGED 491 (598)
T ss_dssp EEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTT
T ss_pred EEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCC
T ss_conf 99999983018899998410899079823246399997447999999999999999697888974645323642278898
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99369999999998214998889837677889898999999999854996399981591266403889999498697806
Q 000689 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1222 LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~G 1301 (1350)
||||||||+|||||++++|+|||||||||+||+++++.+++.+++..+|+|+|+||||++++..||+|++|++|+++|.|
T Consensus 492 LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 571 (598)
T 3qf4_B 492 LSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMG 571 (598)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECS
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999964999999989766799999999999999980899899994277899719989999899999877
Q ss_pred CHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 94677411999535999997420
Q 000689 1302 SHSHLLKNNPDGCYARMIQLQRF 1324 (1350)
Q Consensus 1302 t~~eLl~~~~~g~y~~l~~~q~~ 1324 (1350)
+|+||+++ +|.|++++..|..
T Consensus 572 ~~~~l~~~--~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 572 KHDELIQK--RGFYYELFTSQYG 592 (598)
T ss_dssp CHHHHHHT--TCHHHHHHHHHHG
T ss_pred CHHHHHHC--CCHHHHHHHHHHH
T ss_conf 89999867--8779999999764
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=737.02 Aligned_cols=571 Identities=27% Similarity=0.410 Sum_probs=383.8
Q ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999874033599999999999999998999999999999998299636779999----9999999999999999999999
Q 000689 746 WRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREI----AKYCYLLIGLSSAELLFNTLQH 821 (1350)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~ 821 (1350)
++++++.+++++.+++++++.++.+++..+.++++..+++.............. ..+..+++++.++..++.+++.
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (578)
T 4a82_A 3 KRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQ 82 (578)
T ss_dssp HHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999999999999999999999999999999981687114677888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998189543233567967999999954999999998879999999999999999999898
Q 000689 822 SFWDIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQ 901 (1350)
Q Consensus 822 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~ 901 (1350)
++..+.+.++..++|.++|+++++.|+.||++ +++|++++|+++|++.+++.+...+..++.+.+.+++.+++++.++
T Consensus 83 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~--~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 83 YLAQWTSNKILYDIRKKLYNHLQALSARFYAN--NQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHT--SCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998789999768--9869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999985476999999999999999987229999995128999999999997899999999
Q 000689 902 WRLALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWK 981 (1350)
Q Consensus 902 ~~l~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1350)
|.++++.++.+|+.++...+..+..++..++..+..++..+.+.|++.|+++||+|+.|+.+.++|.+..+...+...+.
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99996558999999999999999999999870778789999999999999999999998899999999999999998435
Q 000689 982 GQIAGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDR 1061 (1350)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~ 1061 (1350)
....+...++..++..+..++++|+|++++..|.+++|.++++..++.....++..+......+.++..+++|+.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 45689999999999999987289997899889999988321102898489899999599997889999995137899537
Q 000689 1062 KTEIEPDDPDATPVPDRLRGEVELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGR 1141 (1350)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~ 1141 (1350)
+++.++.. .. ...+...+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~~~-~~-~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 321 DYDIKNGV-GA-QPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCSSCCCT-TC-CCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCC-CC-CCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 97666787-76-6667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99999517899978762111887367766754588886139999999999999998251899960998754311499998
Q 000689 1142 VMIDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHESATESEIIEAARLANADKFISSLPDGYKTFVGERGVQ 1221 (1350)
Q Consensus 1142 I~idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~~ 1221 (1350)
|.+||.|+++++.+++|++++||||+|.+|++|++|||.++.++.++++++++++.++++++++++|+|+||.++++|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99369999999998214998889837677889898999999999854996399981591266403889999498697806
Q 000689 1222 LSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAELG 1301 (1350)
Q Consensus 1222 LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~G 1301 (1350)
||||||||++||||++++|+|++||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 9467741199953599999742
Q 000689 1302 SHSHLLKNNPDGCYARMIQLQR 1323 (1350)
Q Consensus 1302 t~~eLl~~~~~g~y~~l~~~q~ 1323 (1350)
+|+||++. ++.|+++++.|.
T Consensus 558 ~~~el~~~--~~~~~~~~~~q~ 577 (578)
T 4a82_A 558 THRELIAK--QGAYEHLYSIQN 577 (578)
T ss_dssp CHHHHHHT--TSHHHHHHTTTT
T ss_pred CHHHHHHC--CCHHHHHHHHHC
T ss_conf 89999858--838999998506
No 8
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=724.47 Aligned_cols=572 Identities=28% Similarity=0.416 Sum_probs=502.4
Q ss_pred CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 30189998942624589999999999997978899999999999852479886148799999999999999999999999
Q 000689 86 PVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASSW 165 (1350)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (1350)
+..++++++|.++. +..+++++++.++...+.+..+++++.++|..... .+. ..+..+.++++++.++..++.+
T Consensus 8 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (587)
T 3qf4_A 8 GGGSKTLARYLKPY-WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIAR-GDF----SLVLKTGILMLIVALIGAVGGI 81 (587)
T ss_dssp CCCCCCGGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TCH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCH----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 53499999999999-99999999999999999999999999999998736-987----9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998099244713688227999999879999999999999999899999999999999
Q 000689 166 AEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGFS 245 (1350)
Q Consensus 166 ~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1350)
+..++..+.+.++..++|.++|++++++|..||++. ++|++++|+++|++.+++.+...+..++..++.+++++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~ 160 (587)
T 3qf4_A 82 GCTVFASYASQNFGADLRRDLFRKVLSFSISNVNRF-HTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVS 160 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999978897997658-8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 96989999999999999999999999999999999999999999999980299999865389999999999999999999
Q 000689 246 AVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLGY 325 (1350)
Q Consensus 246 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~~i~tIk~f~~e~~~~~~~~~~~~~~~~~~~ 325 (1350)
++|.+++++++.+|++.++..++.++.++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...
T Consensus 161 ~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~ 240 (587)
T 3qf4_A 161 INVKLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSII 240 (587)
T ss_dssp HCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98999999999999999999999999999999999999999999999985599999862149999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999888899999999999999999999999810568779999999999999999999999999999999999999988
Q 000689 326 KSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRII 405 (1350)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l 405 (1350)
+.....+...++..++..+..++++|+|++++..|.++.|.+++++.+......++..+...+..+.++..+++|+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 320 (587)
T 3qf4_A 241 SAFSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVL 320 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999849938999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 24999888887886678975309999788988999997541102799728989999869999389999999628779974
Q 000689 406 DHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSG 485 (1350)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~~~~~~~~G 485 (1350)
+.+++.++. ......++..+.|+++|++|+|+.. +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|
T Consensus 321 ~~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G 398 (587)
T 3qf4_A 321 NEKPAIEEA-DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERG 398 (587)
T ss_dssp HCCCSCCCC-TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEE
T ss_pred CCCCCCCCC-CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 689765788-7765668888807997889984899-97642111799869988999899999799999999278669986
Q ss_pred EEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHCCCCC
Q ss_conf 89999960788888887434788836787650128999632999999989999999943399995099983212008999
Q 000689 486 QVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERGV 565 (1350)
Q Consensus 486 ~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g~ 565 (1350)
+|.+||.|+++++.+++|++++||+|+|++|++|++|||.+|.+..++++++++++.+++++++..+|+|++|.++++|.
T Consensus 399 ~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~ 478 (587)
T 3qf4_A 399 RVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGR 478 (587)
T ss_dssp EEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSC
T ss_pred EEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCC
T ss_conf 79899998340789999841389778986767559999852488999999999999968499997565312127518989
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 98967999999999832799876872667787989999999999986089769998159135530398999849879885
Q 000689 566 QLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSEI 645 (1350)
Q Consensus 566 ~LSgGqkqri~lARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~vl~~G~i~~~ 645 (1350)
+||||||||++||||++++|++++||||||+||+++++.+++.++++.+++|+|+||||++++..||+|++|++|++++.
T Consensus 479 ~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~ 558 (587)
T 3qf4_A 479 NFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGF 558 (587)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEE
T ss_conf 92999999999999997299999997975447999999999999986799989998227688981998999989989997
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 39578983268918999999999
Q 000689 646 GTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 646 g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
|+|+|++++ ++.|.+++..+.
T Consensus 559 g~~~el~~~--~~~~~~~~~~~~ 579 (587)
T 3qf4_A 559 GTHKELLEH--CKPYREIYESQF 579 (587)
T ss_dssp ECHHHHHHH--CHHHHHHHHHHC
T ss_pred CCHHHHHHC--CCHHHHHHHHHH
T ss_conf 889999867--839999999984
No 9
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=723.33 Aligned_cols=576 Identities=33% Similarity=0.520 Sum_probs=415.0
Q ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998740335999999999999999989999999999999982996367799999999999999999999999999999
Q 000689 745 FWRLAKMNSPEWVYALVGSVGSVICGSLNAFFAYVLSAIMSVYYNPDHAYMIREIAKYCYLLIGLSSAELLFNTLQHSFW 824 (1350)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 824 (1350)
+++++.+.++.++.+.+++++.++.+++.++.++++..+++................++.+++++.++..++.+++.++.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 7 ARKLLGLAYPERRRLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998878999999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998189543233567967999999954999999998879999999999999999999898999
Q 000689 825 DIVGENLTKRVREKMLAAVLKNEIAWFDQEENESARIAARLALDANNVRSAIGDRIQVIVQNTALMLVACTAGFVLQWRL 904 (1350)
Q Consensus 825 ~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~i~~rl~~D~~~i~~~~~~~l~~~i~~~~~~~~~l~~~~~~~~~l 904 (1350)
.+.+.++..++|.++|+++++.|+.||+. +++|++++|+++|++.++..+...+..++..++.+++.++++++++|.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~--~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 164 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDK--TRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNL 164 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHH--SCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777--9848899999999999999999999999999999999999999981999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999985476999999999999999987229999995128999999999997899999999999
Q 000689 905 ALVLIAVFPVVVAATVLQKMFMKGFSGDMEAAHSKATQLAGEAIGNVRTVAAFNSELMIVGLFSSNLQTPLRRCFWKGQI 984 (1350)
Q Consensus 905 ~li~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1350)
++++++.+|+.++...+..+..++..++.++...+..+.+.|.+.|+++||+|+.++.+.++|.+..+...+...+....
T Consensus 165 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 244 (595)
T 2yl4_A 165 ATFVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFA 244 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998119999983756999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 96558999999999999999999999870778789999999999999999999998899999999999999998435456
Q 000689 985 AGSGYGVAQFCLYASYALGLWYSSWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMRSVFDLLDRKTE 1064 (1350)
Q Consensus 985 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ri~~~~~~~~~ 1064 (1350)
.....++..++..+..++++|+|++++..|.+++|.++++..+......++..+......+.++..+++|+.++++.+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 245 RAGFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999986997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCCC-EEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
Q ss_conf 899999999999999872-8999789988999998832110289848989999959999788999999513789953799
Q 000689 1065 IEPDDPDATPVPDRLRGE-VELKHVDFSYPSRPDIPIFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYEPSSGRVM 1143 (1350)
Q Consensus 1065 ~~~~~~~~~~~~~~~~g~-I~f~nVsf~Y~~~~~~~vL~~vsl~I~~Ge~vaIVG~SGSGKSTL~~lL~rl~~p~~G~I~ 1143 (1350)
.++. . ....+....+. |+++||+|+|+++++.++|+|+||++++||++|||||||||||||+++|.|+++|++|+|.
T Consensus 325 ~~~~-~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~ 402 (595)
T 2yl4_A 325 LPFN-E-GVILNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTIS 402 (595)
T ss_dssp SCSS-C-SBCCCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEE
T ss_pred CCCC-C-CCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEE
T ss_conf 6777-7-8777767899838999889985899888120112799849988999899999799999998258578983799
Q ss_pred ECCCCCCCCCHHHHHCCCEEECCCCCCCCCCHHHHHCCCCCC---CCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 999517899978762111887367766754588886139999---99999999999825189996099875431149999
Q 000689 1144 IDGKDIRKYNLKSLRRHMAIVPQEPCLFASTIYENIAYGHES---ATESEIIEAARLANADKFISSLPDGYKTFVGERGV 1220 (1350)
Q Consensus 1144 idG~di~~~~l~~lR~~i~~VpQdp~LF~gTIreNL~~~~~~---~s~~ei~~al~~a~l~~~I~~lp~Gldt~vge~G~ 1220 (1350)
+||.|+++++.+++|++++||||+|.+|++|++|||.++.+. .++++++++++.++++++++++|+|+||.++++|.
T Consensus 403 ~~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~ 482 (595)
T 2yl4_A 403 LDGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGV 482 (595)
T ss_dssp ETTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSC
T ss_pred ECCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
T ss_conf 99998111799999732289836883268779999840587766568999999999869799997473201350168878
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHCCEEEEEECCEEEEE
Q ss_conf 89936999999999821499888983767788989899999999985499639998159126640388999949869780
Q 000689 1221 QLSGGQKQRVAIARAFVRKAEIMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEL 1300 (1350)
Q Consensus 1221 ~LSgGQkQrlaLARAlL~~~~ILiLDEaTSaLD~~te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrI~vL~~G~Ive~ 1300 (1350)
+||||||||++||||++++|+|+|||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 483 ~LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~ 562 (595)
T 2yl4_A 483 LLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEY 562 (595)
T ss_dssp CCCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEE
T ss_conf 68999999999999997599999998866689989999999999999659979999468789975998999989989997
Q ss_pred CCHHHHHHCCCCCHHHHHHHHHHHC
Q ss_conf 6946774119995359999974202
Q 000689 1301 GSHSHLLKNNPDGCYARMIQLQRFT 1325 (1350)
Q Consensus 1301 Gt~~eLl~~~~~g~y~~l~~~q~~~ 1325 (1350)
|+|+||++. +++.|+++++.|...
T Consensus 563 g~~~~l~~~-~~~~~~~~~~~q~~~ 586 (595)
T 2yl4_A 563 GKHEELLSK-PNGIYRKLMNKQSFI 586 (595)
T ss_dssp ECSCC-------C------------
T ss_pred CCHHHHHHC-CCHHHHHHHHHHHCC
T ss_conf 889999747-872999999974302
No 10
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=722.27 Aligned_cols=571 Identities=30% Similarity=0.455 Sum_probs=506.1
Q ss_pred CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 63018999894262458999999999999797889999999999985247988614879999999999999999999999
Q 000689 85 TPVGLGELFRFADSLDYVLMAIGSLGAFVHGCSFPIFLRFFADLVNSFGSNVNNMDKMMQEVLKYAFYFLVVGAAIWASS 164 (1350)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (1350)
....++++++|+++. +..+++++++.++.+++.+..+++++.++|..... .+.. .+..+.++++++.++..++.
T Consensus 21 ~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~ 94 (598)
T 3qf4_B 21 PTATLRRLLGYLRPH-TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVP-RRFD----LLPRYMLILGTIYALTSLLF 94 (598)
T ss_dssp HHHHHHHHGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TCGG----GHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHH----HHHHHHHHHHHHHHHHHHHH
T ss_conf 789999999999999-99999999999999999999999999999999736-8889----99999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999809924471368822799999987999999999999999989999999999999
Q 000689 165 WAEISCWMWTGERQSIKMRIKYLEAALNQDVQYFDTEVRTSDVVYAINTDAVIVQDAISEKLGNFIHYLATFVTGFAVGF 244 (1350)
Q Consensus 165 ~~~~~~~~~~~~~~~~~lr~~~~~~il~~~~~~fd~~~~~G~i~~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (1350)
+++.++....+.++..++|.++|++++++|++||++. ++|++++|+++|++.+++.+...+..++..++.+++.+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~ 173 (598)
T 3qf4_B 95 WLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRT-PHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMF 173 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHS-CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999977999997688-889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99698999999999999999999999999999999999999999999998029999986538999999999999999999
Q 000689 245 SAVWQLALVTLAVVPLIAVIGAIHATSLAKLAGKSQEALSQAGNIVEQTVVQIRVVFAFVGESKALQAYSSALKVAQRLG 324 (1350)
Q Consensus 245 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~~i~tIk~f~~e~~~~~~~~~~~~~~~~~~ 324 (1350)
.++|.+++++++++|+.+++..++.+..++..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+..
T Consensus 174 ~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 253 (598)
T 3qf4_B 174 RVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVG 253 (598)
T ss_dssp HHCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99899999999999999999999999999999999999999999999997379999974870999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999988889999999999999999999999981056877999999999999999999999999999999999999998
Q 000689 325 YKSGFAKGMGLGATYFVVFCSYALLLWYGGYLVRHHFTNGGLAIATMFAVMIGGLALAQAAPSISAFAKAKVAAAKIFRI 404 (1350)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~ 404 (1350)
.+.....+...++..++..+..++++++|++++..|.++.|.+++++.+......++.++...+..+.++..+++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 333 (598)
T 3qf4_B 254 TKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEI 333 (598)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999985997899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 82499988888788667897530999978898899999754110279972898999986999938999999962877997
Q 000689 405 IDHKPSIDRNSESGLELDSVSGLIELKHVDFSYPSRPEVRILNNFSLTVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS 484 (1350)
Q Consensus 405 l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~f~y~~~~~~~~l~~i~l~i~~g~~~~ivG~sGsGKSTl~~~l~~~~~~~~ 484 (1350)
++.+++.+. ....+..+..+.|+++|++|+|++ +.++|+|+||++++|++++|+||||||||||+++|.|+++|++
T Consensus 334 l~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~ 409 (598)
T 3qf4_B 334 LDLEEEKDD--PDAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDR 409 (598)
T ss_dssp TTSCCCCCC--SSCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSE
T ss_pred HCCCCCCCC--CCCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCC
T ss_conf 768877777--777777777771899998997799--9860122279986998899989999969999999945857998
Q ss_pred CEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHCCCC
Q ss_conf 48999996078888888743478883678765012899963299999998999999994339999509998321200899
Q 000689 485 GQVLLDGHDIKSLKLRWLRQQIGLVSQEPALFATTIKENILLGRPDADLNEIEEAARVANAYSFIIKLPDGFDTQVRERG 564 (1350)
Q Consensus 485 G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~lp~g~~t~~~~~g 564 (1350)
|+|.+||.|+++++..++|++++||+|+|++|++|++|||.+|.+..++++++++++.+++++++..+|+|++|.++++|
T Consensus 410 G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g 489 (598)
T 3qf4_B 410 GQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNG 489 (598)
T ss_dssp EEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHH
T ss_pred EEEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCC
T ss_conf 08999999830188999984108990798232463999974479999999999999996978889746453236422788
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHCCEEEEEECCEEEE
Q ss_conf 99896799999999983279987687266778798999999999998608976999815913553039899984987988
Q 000689 565 VQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADVVAVLQQGSVSE 644 (1350)
Q Consensus 565 ~~LSgGqkqri~lARal~~~~~illLDE~ts~lD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~vl~~G~i~~ 644 (1350)
.+||||||||++||||++++|++++||||||+||+++++.+++.+.++.+++|+|+||||++++..||+|++|++|++++
T Consensus 490 ~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~ 569 (598)
T 3qf4_B 490 EDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVE 569 (598)
T ss_dssp TTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEE
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEE
T ss_conf 98799999999999999649999999897667999999999999999808998999942778997199899998999998
Q ss_pred ECCHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 539578983268918999999999
Q 000689 645 IGTHDELIAKGENGVYAKLIRMQE 668 (1350)
Q Consensus 645 ~g~~~~l~~~~~~~~~~~l~~~~~ 668 (1350)
.|+|+|++++ ++.|.+++..+.
T Consensus 570 ~g~~~~l~~~--~~~~~~~~~~~~ 591 (598)
T 3qf4_B 570 MGKHDELIQK--RGFYYELFTSQY 591 (598)
T ss_dssp CSCHHHHHHT--TCHHHHHHHHHH
T ss_pred ECCHHHHHHC--CCHHHHHHHHHH
T ss_conf 7789999867--877999999976
Done!