Query 000693
Match_columns 1349
No_of_seqs 327 out of 385
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 16:55:55 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000693.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_464-468//hhsearch_pdb/000693hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1i84_S Smooth muscle myosin he 1.0 1 1 102.7 11.3 325 484-812 856-1180(1184)
2 2fxo_A Myosin heavy chain, car 1.0 1 1 78.6 13.2 97 114-230 9-126 (129)
3 1c1g_A Tropomyosin; contractIl 1.0 1 1 71.9 42.1 282 475-756 3-284 (284)
4 3bas_A Myosin heavy chain, str 1.0 1 1 49.2 11.0 73 114-197 10-82 (89)
5 3vkg_A Dynein heavy chain, cyt 1.0 1 1 39.6 28.9 52 346-397 1900-1951(3245)
6 3vkg_A Dynein heavy chain, cyt 1.0 1 1 38.5 29.3 24 715-738 2325-2348(3245)
7 2v71_A Nuclear distribution pr 1.0 1 1 35.2 18.5 14 839-852 24-37 (189)
8 3o0z_A RHO-associated protein 1.0 1 1 34.9 19.9 143 295-438 5-152 (168)
9 2efr_A General control protein 1.0 1 1 33.6 21.8 152 424-596 2-153 (155)
10 3o0z_A RHO-associated protein 1.0 1 1 31.9 19.3 150 445-594 1-154 (168)
No 1
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=1.00 E-value=1 Score=102.74 Aligned_cols=325 Identities=15% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999826889998987845615688998998999999999987621279999999898999999999999999999997
Q 000693 484 EDIIRASNEAAEEAKSQLRELEPRFIAAEQRSVELEQQLNLVELKSSDSEREVREFSEKLSQLSTALKEVEEEKKQLHDQ 563 (1349)
Q Consensus 484 ~~q~~~~~~~~Ek~k~~l~~l~~~~~~~e~k~keLE~Ql~elq~K~~e~erei~eleekiskLk~EL~elE~eLeele~k 563 (1349)
...+...+..++..+..+..++......+.....++.+...+...+......+......+..+...+..+...+..+...
T Consensus 856 ~~El~~L~~eL~el~~~L~~le~~l~ele~~l~~Le~e~~~l~~~L~~e~~~l~~~e~~l~~l~~~~~~Le~~l~ele~e 935 (1184)
T 1i84_S 856 EEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKKQELEEILHEMEAR 935 (1184)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999959989999999998997752887853456625988886775655242344559999999999
Q 000693 564 MNDYKDKITQLELILNQSNTRSSELEEELRITKERSAEDEDRANMSHQRSIELEDLFQTSHSKLEGTGKRVNELELLLEA 643 (1349)
Q Consensus 564 lee~q~kIs~LEsqLk~LqsrireLEEel~~L~EeLeE~e~r~k~~rqrs~eLeell~~~k~kLEe~~~~leelEe~LE~ 643 (1349)
+......+..++..+..+...+..+...+..+...+................+...+..++..+.........++..+..
T Consensus 936 lee~ee~l~el~~e~~~le~el~~L~~eleele~~l~~l~~e~~~le~~l~~l~~el~~lee~l~~l~~e~~~le~~i~~ 1015 (1184)
T 1i84_S 936 IEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKMEDDILIMEDQNNKLTKERKLLEERVSD 1015 (1184)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999998988999999999999999988888899999999999999998887899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999824887999999999999999997779999999999999999999999999999999
Q 000693 644 EKYRIQELEEQISKLEKKCEEAEAGSKQYSDKVCELASELEAFQARTSSLEVALQMANDKERELTESLNAAADEKRKLQD 723 (1349)
Q Consensus 644 ~K~RlqELEeqis~LEKKik~~eqeL~el~~~l~kLk~ELE~~eke~relEt~L~~~~ek~reL~eqlee~e~~k~~LE~ 723 (1349)
...++...+..+..+.+....+...+..+...+......+..+....+.++..+...+....++...+..+...+..++.
T Consensus 1016 l~~~l~~~e~k~~~lek~~~~le~el~ele~~le~~e~~~~ele~~~~~le~el~~l~~el~el~~el~~le~~l~~le~ 1095 (1184)
T 1i84_S 1016 LTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEE 1095 (1184)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86479999999999999999789978999997799888704531357999999999999999989987410233466588
Q 000693 724 TSNGYNEKLAEAENLLELLRNDLNMTQERLESIEKDLKAAGLRETDVMEKLKSAEEQLEQQTRVLEQATSRNSELESLHE 803 (1349)
Q Consensus 724 EieEl~~qLeElE~~Le~LR~El~l~q~k~eslE~~l~~~~~~eee~~~k~k~~~~~l~~~~~~Le~e~~~~~e~~~~~~ 803 (1349)
++..+..++++....+..+..++.-++..++.++.++.....+-......+..+.+.+..+...|++...-..-..
T Consensus 1096 el~~l~~~le~l~~~~~~le~~l~~Le~eie~L~eeLee~~~~~~~le~q~~~L~~ele~L~~~Ieel~~vn~aq~---- 1171 (1184)
T 1i84_S 1096 ELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQ---- 1171 (1184)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_conf 9999999999999889878999999999999999999999888999999999999999999999998766799999----
Q ss_pred HHHHHHHHH
Q ss_conf 765766698
Q 000693 804 SLMRESEMK 812 (1349)
Q Consensus 804 ~~~kk~E~~ 812 (1349)
.+.++++.+
T Consensus 1172 el~~~~e~~ 1180 (1184)
T 1i84_S 1172 ELRGSDYKD 1180 (1184)
T ss_dssp ---------
T ss_pred HHHHHHCCC
T ss_conf 988502122
No 2
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=1.00 E-value=1 Score=78.57 Aligned_cols=97 Identities=23% Similarity=0.310 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
Q ss_conf 5269998823779999999999844545678787899999999843310456889999997899-------999999999
Q 000693 114 KNAEIENARLQDDVLITKEKLEESGKKCEELEIGQKKFQEQIVEAGEKYNSELNAMKEALQAEE-------AKRKELAEV 186 (1349)
Q Consensus 114 ~~~e~e~~~~~~el~~~ke~l~~~e~~~~ele~~~~~l~~~~~~~~~~~~~e~~~L~~~lq~e~-------e~~~~L~~~ 186 (1349)
-+++.+|.++++++..+++++.+.+..+.+|+..+.+|.+ +++.|+.+|+++. +++.+|+..
T Consensus 9 ~~~e~E~~~~~eel~~lke~l~k~e~~r~ele~~~~~l~~-----------Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~ 77 (129)
T 2fxo_A 9 AEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQ-----------EKNDLQLQVQAEQDNLADAEERCDQLIKN 77 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0548999999999999999999989889999999999999-----------99999999997787887589999999988
Q ss_pred HHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9986--------------4412999998888999999987309877666773200487
Q 000693 187 KEAF--------------DGLSLEIEQSRSRLQELEHKLQCSVDEARKFEELHKQSGS 230 (1349)
Q Consensus 187 ke~l--------------ee~~~~l~~~kkk~q~~~~~L~~~~~~~~~~eel~~e~~~ 230 (1349)
+..| ++++..|...++|+++.|.+|+.++++ ++++
T Consensus 78 k~eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led---------~e~~ 126 (129)
T 2fxo_A 78 KIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDD---------LELT 126 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHH
T ss_conf 999999999999989999988999998888899999999988888---------8876
No 3
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=1.00 E-value=1 Score=71.88 Aligned_cols=282 Identities=17% Similarity=0.210 Sum_probs=0.0
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 80014088899999826889998987845615688998998999999999987621279999999898999999999999
Q 000693 475 TASQRNLELEDIIRASNEAAEEAKSQLRELEPRFIAAEQRSVELEQQLNLVELKSSDSEREVREFSEKLSQLSTALKEVE 554 (1349)
Q Consensus 475 ~~~qk~~EL~~q~~~~~~~~Ek~k~~l~~l~~~~~~~e~k~keLE~Ql~elq~K~~e~erei~eleekiskLk~EL~elE 554 (1349)
.+++|..-|...++.....+......+..+..........+..+...+..+...+..+...+..+...+..+...+..+.
T Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (284)
T 1c1g_A 3 AIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDELDKYSEALKDAQEKLELAEKKATDAE 82 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 78999999887688899999999999999998898889999999999999999999999999999999999999898779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999799999999999999999959989999999998997752887853456625988886775655242344559
Q 000693 555 EEKKQLHDQMNDYKDKITQLELILNQSNTRSSELEEELRITKERSAEDEDRANMSHQRSIELEDLFQTSHSKLEGTGKRV 634 (1349)
Q Consensus 555 ~eLeele~klee~q~kIs~LEsqLk~LqsrireLEEel~~L~EeLeE~e~r~k~~rqrs~eLeell~~~k~kLEe~~~~l 634 (1349)
..+..+...+..+...+..+...+..+...+..+...+..+...+................+...+...+..+......+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 162 (284)
T 1c1g_A 83 ADVASLNRRIQLFEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKY 162 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999889889988988999999999999888889999998887775106679999999999999888899889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999824887999999999999999997779999999999999999999999
Q 000693 635 NELELLLEAEKYRIQELEEQISKLEKKCEEAEAGSKQYSDKVCELASELEAFQARTSSLEVALQMANDKERELTESLNAA 714 (1349)
Q Consensus 635 eelEe~LE~~K~RlqELEeqis~LEKKik~~eqeL~el~~~l~kLk~ELE~~eke~relEt~L~~~~ek~reL~eqlee~ 714 (1349)
..+...+......+..+...+..+...+..+...+..+...+..+...+..+......+...+.........+...+..+
T Consensus 163 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 242 (284)
T 1c1g_A 163 EEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFA 242 (284)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899888889989998987887999999999999999999997587788899999999999998889899889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999864799999999999999997899789999977
Q 000693 715 ADEKRKLQDTSNGYNEKLAEAENLLELLRNDLNMTQERLESI 756 (1349)
Q Consensus 715 e~~k~~LE~EieEl~~qLeElE~~Le~LR~El~l~q~k~esl 756 (1349)
......+...+..+...+..+...+..++.+++-....+.+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 284 (284)
T 1c1g_A 243 ERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI 284 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 988999999999999999999988999999999999974369
No 4
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=1.00 E-value=1 Score=49.21 Aligned_cols=73 Identities=19% Similarity=0.154 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52699988237799999999998445456787878999999998433104568899999978999999999999986441
Q 000693 114 KNAEIENARLQDDVLITKEKLEESGKKCEELEIGQKKFQEQIVEAGEKYNSELNAMKEALQAEEAKRKELAEVKEAFDGL 193 (1349)
Q Consensus 114 ~~~e~e~~~~~~el~~~ke~l~~~e~~~~ele~~~~~l~~~~~~~~~~~~~e~~~L~~~lq~e~e~~~~L~~~ke~lee~ 193 (1349)
-+++++|.++++++..+++.+++.+..+++|+.++++|.+ ++++|+.++..-.+++.+|+..|..|++.
T Consensus 10 ~~~eeEm~~~eeel~~lke~l~k~e~~rkele~~~~~l~~-----------ek~~L~~ql~eaEe~~~~L~~~K~eLE~~ 78 (89)
T 3bas_A 10 ARQEEEMKEQLKQMDKMKEDLAKTERIKKELEEQNVTLLE-----------QKNDLFGSMKQLEDKVEELLSKNYHLENE 78 (89)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 3369999999999999999999989899999999999999-----------99999999875799999999889999999
Q ss_pred HHHH
Q ss_conf 2999
Q 000693 194 SLEI 197 (1349)
Q Consensus 194 ~~~l 197 (1349)
..+|
T Consensus 79 l~el 82 (89)
T 3bas_A 79 VARL 82 (89)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
No 5
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=39.56 Aligned_cols=52 Identities=23% Similarity=0.319 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999788757536888885699887478799998865999986999999
Q 000693 346 LLADAKENLHAKVSELEDIKLKLQEEVNARESVEAVLKTQEAQVSNVNEELD 397 (1349)
Q Consensus 346 ~~~~~~~~l~~k~~el~~~~~k~eee~~~~~~l~~~I~elea~i~eLqeELe 397 (1349)
.+.-+..-+..|-.++.....|+.-....-..+...+.+++.++..++-+|+
T Consensus 1900 li~~y~~ll~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~ 1951 (3245)
T 3vkg_A 1900 FINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELD 1951 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999998899999999999999999999899999
No 6
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=1.00 E-value=1 Score=38.53 Aligned_cols=24 Identities=17% Similarity=0.209 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999864799999999999
Q 000693 715 ADEKRKLQDTSNGYNEKLAEAENL 738 (1349)
Q Consensus 715 e~~k~~LE~EieEl~~qLeElE~~ 738 (1349)
++++..|-....+.+.+|.++|+.
T Consensus 2325 E~~r~~Li~~~~~~k~~L~~LEd~ 2348 (3245)
T 3vkg_A 2325 HKKRSDLLKIQGEFQVKLRILEKS 2348 (3245)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999
No 7
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=35.20 Aligned_cols=14 Identities=14% Similarity=0.159 Sum_probs=4.3
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q 000693 839 GQVKMYEEQLAEAA 852 (1349)
Q Consensus 839 ~qik~~q~~~~ea~ 852 (1349)
.++..++.++++-+
T Consensus 24 q~~~~le~El~EFq 37 (189)
T 2v71_A 24 QSFQEARDELVEFQ 37 (189)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 8
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=1.00 E-value=1 Score=34.95 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=0.0
Q ss_pred HHH-HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 887-2121456888998787587533533678888864356699999999989999999788757536888885699887
Q 000693 295 QEE-LGLSKLQLLDLEQRFSSKEALITNLTQELDLIKASESQAKEEISALDNLLADAKENLHAKVSELEDIKLKLQEEVN 373 (1349)
Q Consensus 295 ee~-~~l~Ks~l~dlE~rl~~ee~~~~~~r~ele~~kr~~~~~~e~~~~l~~~~~~~~~~l~~k~~el~~~~~k~eee~~ 373 (1349)
.|| ..|-| ||.|+-..|..+--...-+|-..--.......+...+.+|+.....+...-..-+.++-.+++-|+.|-.
T Consensus 5 neKi~~Lek-QL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~qEr~ 83 (168)
T 3o0z_A 5 NEKLSQLQK-QLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERR 83 (168)
T ss_dssp -----CTHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 488899999-9999999999867899999988999998899899997899999999998899999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Q ss_conf 4787999988659999869999999999999999999985554999998879999----9974456643
Q 000693 374 ARESVEAVLKTQEAQVSNVNEELDKVSKEKEALEAAMADLTGNIARMKELCSELE----EKLRNSDENF 438 (1349)
Q Consensus 374 ~~~~l~~~I~elea~i~eLqeELe~~~~~r~~le~~~~DLe~~~~el~~~l~~LE----eeL~~~~~e~ 438 (1349)
.+......|.+++.+|..|+.||+..+....++.....-|...+..+...+.-++ =+|++.+.-|
T Consensus 84 ~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~~ 152 (168)
T 3o0z_A 84 DRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRL 152 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 887777899999999999999999999989999999999999989999899740478877799989899
No 9
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=1.00 E-value=1 Score=33.56 Aligned_cols=152 Identities=17% Similarity=0.251 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999997445664322332445642115899998740998743038889980014088899999826889998987845
Q 000693 424 CSELEEKLRNSDENFCKTDSLLSQALANNAELELKLKSLEEQHNETGAAAATASQRNLELEDIIRASNEAAEEAKSQLRE 503 (1349)
Q Consensus 424 l~~LEeeL~~~~~e~~K~e~~ls~~~~~~~El~~~~k~lee~~~~~e~~~~~~~qk~~EL~~q~~~~~~~~Ek~k~~l~~ 503 (1349)
+..|+.+|+.+..+--.+-. |+.. ++...-..+.++..+-.|..+|++.+..+. ..+++
T Consensus 2 ~~~lE~qlkeaae~ad~Kye----------EvaR----~E~dLEraEERae~aE~k~~eLEeeL~~v~-------~nlKs 60 (155)
T 2efr_A 2 MKQLEDKVEELLSKNYHLEN----------EVAR----LKKLLERAEERAELSEGKSAELEEELKTVT-------NNLKS 60 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----------HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----------HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHCC
T ss_conf 77789999999998587789----------9998----987887899999999998999999999887-------72103
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 61568899899899999999998762127999999989899999999999999999999799999999999999999959
Q 000693 504 LEPRFIAAEQRSVELEQQLNLVELKSSDSEREVREFSEKLSQLSTALKEVEEEKKQLHDQMNDYKDKITQLELILNQSNT 583 (1349)
Q Consensus 504 l~~~~~~~e~k~keLE~Ql~elq~K~~e~erei~eleekiskLk~EL~elE~eLeele~klee~q~kIs~LEsqLk~Lqs 583 (1349)
|+..-.-+..+-..++.++..+..++.++++....-+-.+.++...|..++..+.....+.-.....+.+.-..+..+..
T Consensus 61 LE~seekasqrEd~yEeqIk~L~~kLKEAE~RAE~AERsv~kLEk~id~lEd~L~~~Kek~~~i~~eLd~tl~el~~~~~ 140 (155)
T 2efr_A 61 LEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEEMKQLEDKVEELLS 140 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 03345678998999999999999999999998999997899999899999999999999899999999999999986463
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9899999999989
Q 000693 584 RSSELEEELRITK 596 (1349)
Q Consensus 584 rireLEEel~~L~ 596 (1349)
....|+.+.+.+.
T Consensus 141 ~~~~~~~~~~~~~ 153 (155)
T 2efr_A 141 KNYHLENEVARLK 153 (155)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
T ss_conf 0688877998863
No 10
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=1.00 E-value=1 Score=31.95 Aligned_cols=150 Identities=13% Similarity=0.173 Sum_probs=0.0
Q ss_pred HHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 45642115899998740998743038889980014088899999826889998987845615688998998999999999
Q 000693 445 LSQALANNAELELKLKSLEEQHNETGAAAATASQRNLELEDIIRASNEAAEEAKSQLRELEPRFIAAEQRSVELEQQLNL 524 (1349)
Q Consensus 445 ls~~~~~~~El~~~~k~lee~~~~~e~~~~~~~qk~~EL~~q~~~~~~~~Ek~k~~l~~l~~~~~~~e~k~keLE~Ql~e 524 (1349)
+|-+.-....|+.-+-.+++.+......++-+|+-+.|+.-.+.+.-+..-.....+..|+..+...++.+..|..++..
T Consensus 1 ~~~~neKi~~LekQL~E~n~kLk~EsE~~~rlkK~~tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~q 80 (168)
T 3o0z_A 1 GSLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEA 80 (168)
T ss_dssp ---------CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 96324888999999999999999867899999988999998899899997899999999998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q ss_conf 9876212799999998989999999999999999999979999999999999999995----998999999999
Q 000693 525 VELKSSDSEREVREFSEKLSQLSTALKEVEEEKKQLHDQMNDYKDKITQLELILNQSN----TRSSELEEELRI 594 (1349)
Q Consensus 525 lq~K~~e~erei~eleekiskLk~EL~elE~eLeele~klee~q~kIs~LEsqLk~Lq----srireLEEel~~ 594 (1349)
...-+....-.+.++.+++..+..++......+.........++..++.|++....+. -.++.+...+..
T Consensus 81 Er~~r~q~se~~~elq~ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lEKe~a~~eid~~~eLKalQ~~~eq 154 (168)
T 3o0z_A 81 ERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSEKEKNNLEIDLNYKLKSLQQRLEQ 154 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99888777789999999999999999999998999999999999998999989974047887779998989999
Done!