BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000694
(1349 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 284 bits (726), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 238/836 (28%), Positives = 434/836 (51%), Gaps = 40/836 (4%)
Query: 534 ISSLFFSGDLRKCNKDYVVEVTTLYKMLNSKTGVKYDMLQDVILEQLLTAISASKEETVI 593
ISSL S +L +C ++ V+++ L K + + + + I+ L+ +SAS+ V+
Sbjct: 664 ISSLCTSENLPEC-EEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEILSASRNREVL 722
Query: 594 RASVSILTTIILANESVIEDIKKKGLRLSDLATALKRNVPEAAILIYLIKPSPTEIKTLE 653
R S+ IL+ +I ++SV E + LAT LK + EAA+LIY ++P ++ E
Sbjct: 723 RTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHE 782
Query: 654 LLPTLVEVICTSKLYKGKLESVRLTPPAASLMIIEVLVTAFDYATNNMHLAAINSPRVLC 713
L+P+LV+VI + V + P A++ I+E + D + +++ +++ S +
Sbjct: 783 LIPSLVDVIQNKNEELDDFQLV-IDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIP 841
Query: 714 GLLDVARHQNLEELISLATILVKCIQFDGQCRKYLSEFTAVAPLACLLQSGEKRAIMIAL 773
L V + +E S+ ++L+ C+Q + C+ ++ ++P+ L SG +
Sbjct: 842 TL--VKYLERMEGRRSVVSVLLCCMQAEKSCKNLIANRIELSPVLELFHSGNDSVRGTCV 899
Query: 774 EFFHEILRIPRSSAID-LLQRIHKEGNINILHILKLSLQQLQSDYQLLAANLLLQLDTLE 832
EF E++++ R ++ + +L I EG + +H + LQ ++QL A+LLLQLD L
Sbjct: 900 EFLSELVQLNRRTSCNQILHTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLA 959
Query: 833 NTTGKSVFTEEAMQVILKAVASEESSTMQLLSSFILSNIGGTFSWTGEPYTVAWLVKKAG 892
S++ EEA++ +++A+ ++ S Q+ + L + G S +G+ YT AWL+K AG
Sbjct: 960 EPRKMSIYREEAVETLIEALWQKDFSNTQMKALDALLFLIGHISSSGKSYTEAWLLKIAG 1019
Query: 893 LNSSW-----LQNMIRNFDWLDQSLQD--RGVDSWSSKIAKSII--EIGKPIYYALEKGL 943
+ + ++ + ++ + L ++++D ++SW +IA + E G I+ ALE+ L
Sbjct: 1020 FDQPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKRIASVLCNHENGS-IFKALEECL 1078
Query: 944 KSKTKSVCRDSLTTIAWLSFEVSKSPNS-VRHSACQILLDGVEQFLHPGLELEERLLACL 1002
KS + + + L WL+ + P++ VR A + LL+ V L LEE++LA L
Sbjct: 1079 KSNSLKMAKSCLVLATWLTHMLYTLPDTGVRDVARKSLLEEVINVLQSSKNLEEKILATL 1138
Query: 1003 CIYNYASGKGMQKLIRS-SEGVRESLRRLSNVTWMAEELHKAADYYLPNISRISCVH--- 1058
+ + S + +R ++ + +LRRL + +A ++ K + N+ +
Sbjct: 1139 ALKTFISDPSTHEALRVYAKSIYRTLRRLKKYSVVAVDIMKV----ILNLKSVDVTELWS 1194
Query: 1059 -TQILEASHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSF 1117
+++E +G V +++Y G + SG +DG+IK+WD +K+ ++ + EH KAVT
Sbjct: 1195 CKEVVELDLSSNGEVLSMVYLNGQVLSGHTDGTIKVWDARKRIPRVIQETHEHTKAVT-- 1252
Query: 1118 SLFEPGESLLSGSADKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMK 1177
SL G+ L SGS DKTI VW + ++ I+V KE + +L K +QG +K
Sbjct: 1253 SLCSSGDRLYSGSLDKTIRVWTIKSDGIKCIDVYDIKEAVHELAANDKLACYVSQGTGVK 1312
Query: 1178 VIDSSRTLKDIYRSKGIKSMSVVQGKIYIGCMDSSIQELAVSNNVEREIKAPFKSWR--L 1235
V + S K I SK +KS++V K+Y GC SIQE+ +S F R L
Sbjct: 1313 VFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSF---FTGTRKLL 1369
Query: 1236 QSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMAVVEDFIYL 1295
+ I+SL ++ D+L++ SSV+ + K + +K + + G I +A+ DFI+
Sbjct: 1370 GKQTIHSLQIHDDYLFACGSSVDATAGKIFSLSQKMVVG-SLSTGLDIHRIAINSDFIFA 1428
Query: 1296 NYNSSASSLQIWLRGTQQKVGRIS-AG--SKITSLLTAND--IVLCGTETGLIKGW 1346
+ ++++WL+ +V I AG +KITSL++ D ++ G+ G I+ W
Sbjct: 1429 --GTKFGTIEVWLKDKFTRVASIKMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVW 1482
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 26 EIIRALVVSINEFILEFITHVERWHALKLRCASKLNMK-----RKEFFEFSEHSILSNLY 80
+I+R L +++ FI + + + E+ K +CA +L + + E+S+ ++L+NL
Sbjct: 13 DIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEVEYSDQAVLANLD 72
Query: 81 WGIDSIEAAIQAEWPEEKARRLCNSERLLQAPALLDEQEVTSGIPNCYLVSCAYFYLSVI 140
WGI+++E AI E K RL +E++LQ A+L+ ++ +G+PN YL + A+ LS +
Sbjct: 73 WGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKIAGVPNSYLSAWAHLNLSYL 132
Query: 141 KKLQEDELQVALHFLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSG 191
KL+ + H L+ V P +FAPEL K LF LP + ++ G
Sbjct: 133 WKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLF----LPHMSSIVG 179
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus GN=LIN
PE=1 SV=1
Length = 1485
Score = 273 bits (699), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 238/836 (28%), Positives = 433/836 (51%), Gaps = 40/836 (4%)
Query: 534 ISSLFFSGDLRKCNKDYVVEVTTLYKMLNSKTGVKYDMLQDVILEQLLTAISASKEETVI 593
ISSL S +L +C ++ V+++ L K + + + + I+ L+ +SAS+ V+
Sbjct: 664 ISSLCTSENLPEC-EEAVLKIARLLKDSKTNPQIHSYLSKPTIINGLVEILSASRNREVL 722
Query: 594 RASVSILTTIILANESVIEDIKKKGLRLSDLATALKRNVPEAAILIYLIKPSPTEIKTLE 653
R S+ IL+ +I ++SV E + LAT LK + EAA+LIY ++P ++ E
Sbjct: 723 RTSIYILSELIFTDDSVAETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHE 782
Query: 654 LLPTLVEVICTSKLYKGKLESVRLTPPAASLMIIEVLVTAFDYATNNMHLAAINSPRVLC 713
L+P+LV+VI + V + P A++ I+E + D + +++ +++ S +
Sbjct: 783 LIPSLVDVIQNKNEELDDFQLV-IDPKDAAIAILEQTLMGGDEYSRSLNASSVISANGIP 841
Query: 714 GLLDVARHQNLEELISLATILVKCIQFDGQCRKYLSEFTAVAPLACLLQSGEKRAIMIAL 773
L V + +E S+ ++L+ C+Q + C+ ++ ++P+ L SG +
Sbjct: 842 TL--VKYLERMEGRRSVVSVLLCCMQAEKSCKNLIANRIELSPVLELFHSGNDSVRGTCV 899
Query: 774 EFFHEILRIPRSSAID-LLQRIHKEGNINILHILKLSLQQLQSDYQLLAANLLLQLDTLE 832
EF E++++ R ++ + LL I EG + +H + LQ ++QL A+LLLQLD L
Sbjct: 900 EFLSELVQLNRRTSCNQLLHTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLA 959
Query: 833 NTTGKSVFTEEAMQVILKAVASEESSTMQLLSSFILSNIGGTFSWTGEPYTVAWLVKKAG 892
S++ EEA++ +++A+ ++ S Q+ + L + G S +G+ YT AWL+K AG
Sbjct: 960 EPRKMSIYREEAVETLIEALWQKDFSNTQMKALDALLFLIGHISSSGKSYTEAWLLKIAG 1019
Query: 893 LNSSW-----LQNMIRNFDWLDQSLQD--RGVDSWSSKIAKSII--EIGKPIYYALEKGL 943
+ + ++ + ++ + L ++++D ++SW +IA + E G I+ ALE+ L
Sbjct: 1020 FDQPYNALMKVEQLGQHDNDLIETMEDEKNALNSWQKRIASVLCNHENGS-IFKALEECL 1078
Query: 944 KSKTKSVCRDSLTTIAWLSFEVSKSPNS-VRHSACQILLDGVEQFLHPGLELEERLLACL 1002
KS + + + L WL+ + P++ VR A + LL+ V + LH LE+ +L L
Sbjct: 1079 KSNSLKMAKSCLVLATWLTRMLYTLPDTGVRDVARKSLLEEVIKVLHSSKSLEDMILVTL 1138
Query: 1003 CIYNYASGKGMQKLIRS-SEGVRESLRRLSNVTWMAEELHKAADYYLPNISRISCVH--- 1058
+Y + S + +++R ++ + LR+L + +A ++ KA L N++ +
Sbjct: 1139 SLYPFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKA----LLNLNSVDVTELWS 1194
Query: 1059 -TQILEASHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSF 1117
+++E +G V +L Y G + SG DG+ K+ D +K+ ++ + EH KAVT
Sbjct: 1195 CKEVVELDLSSNGEVLSLHYLNGQVLSGLMDGTSKVCDARKRIPRVIQETHEHTKAVT-- 1252
Query: 1118 SLFEPGESLLSGSADKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMK 1177
SL G+ L S S DKTI VW + ++ I+V KE + +L K +QG +K
Sbjct: 1253 SLCSSGDRLYSASLDKTIRVWTIKSDGIKCIDVYDIKEAVHELAANDKLACYVSQGTGVK 1312
Query: 1178 VIDSSRTLKDIYRSKGIKSMSVVQGKIYIGCMDSSIQELAVSNNVEREIKAPFKSWR--L 1235
V + S K I SK +KS++V K+Y GC SIQE+ +S F R L
Sbjct: 1313 VFNWSEAPKLINFSKYVKSLAVAGDKLYCGCSGYSIQEVDLSTYTSNSF---FTGTRKLL 1369
Query: 1236 QSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMAVVEDFIYL 1295
+ I+SL ++ D+L++ SSV+ + K + +K + + G I +A+ DFI+
Sbjct: 1370 GKQTIHSLQIHDDYLFACVSSVDATAGKIFSLSQKMVVG-SLSTGLDIHRIAINSDFIFA 1428
Query: 1296 NYNSSASSLQIWLRGTQQKVGRIS-AG--SKITSLLTAND--IVLCGTETGLIKGW 1346
+ ++++WL+ +V I AG +KITSL++ D ++ G+ G I+ W
Sbjct: 1429 --GTKFGTIEVWLKDKFTRVASIQMAGGHTKITSLVSDVDGMMLFVGSSDGKIQVW 1482
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 9/171 (5%)
Query: 26 EIIRALVVSINEFILEFITHVERWHALKLRCASKLNMK-----RKEFFEFSEHSILSNLY 80
+I+R L +++ FI + + + E+ K +CA +L + + E+S+ ++L+NL
Sbjct: 13 DIVRFLTTTVDSFIQDRLINKEQRTQHKEQCAERLAAEDGSGDKDTEVEYSDQAVLANLD 72
Query: 81 WGIDSIEAAIQAEWPEEKARRLCNSERLLQAPALLDEQEVTSGIPNCYLVSCAYFYLSVI 140
WGI+++E AI E K RL +E++LQ A+L+ ++ +G+PN YL + A+ LS +
Sbjct: 73 WGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKIAGVPNSYLSAWAHLNLSYL 132
Query: 141 KKLQEDELQVALHFLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSG 191
KL+ + H L+ V P +FAPEL K LF LP + ++ G
Sbjct: 133 WKLRNNVQNCISHALEMFIVDPFFTRIDFAPELWKSLF----LPHMSSIVG 179
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 253 bits (647), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 245/933 (26%), Positives = 454/933 (48%), Gaps = 70/933 (7%)
Query: 451 ELRDKISNGSCHVEGKISKQHKVQPSDCVLSSSPQQSCRFTEMDYRGSSERKKNSSGRKK 510
EL + SN + S K D + SS Q++ Y+ R++N+ +
Sbjct: 586 ELAQEFSNSNTPRGSSCSPSAK----DITMVSSIQRTTDSPSQKYKDDYIRQRNN----R 637
Query: 511 FNEECLNG------EKDAKSELLEIIEKAISSLFFSGDLRKCNKDYVVEVTTLYKMLNSK 564
F + + A ++ + I+SL S +L+ C + V+E+ L+K +
Sbjct: 638 FTRVSVGASPTSVLSQAAVETIINSLTPYITSLCTSENLQDCEQ-AVLEIARLWKDSKTD 696
Query: 565 TGVKYDMLQDVILEQLLTAISASKEETVIRASVSILTTIILANESVIEDIKKKGLRLSDL 624
+ + + ++ L+ +SAS V+R S+ IL+ +I ++E V E + L
Sbjct: 697 PQIHSYLSKPTVVSGLVEILSASLNREVLRRSIYILSELIFSDERVGETLNSVDSDFDCL 756
Query: 625 ATALKRNVPEAAILIYLIKPSPTEIKTLELLPTLVEVICTSKLYKGKLESVR-----LTP 679
A LK + EAA+LIY ++P ++ EL+P+L++VI + K E + + P
Sbjct: 757 AMLLKNGLAEAALLIYQLRPVFAQLSEHELIPSLIQVI------QNKSEDIDDFQLAIDP 810
Query: 680 PAASLMIIEVLVTAFDYATNNMHLAAINSPRVLCGLLDVARH-QNLEELISLATILVKCI 738
AA++ I+E ++ D +++ +++ S G+ + ++ E + +IL+ C+
Sbjct: 811 KAAAIAILEQILIGGDEYNRSVNASSVISAN---GIPAIVKYLDKTEGRRPVISILLCCM 867
Query: 739 QFDGQCRKYLSEFTAVAPLACLLQSGEKRAIMIALEFFHEILRIP-RSSAIDLLQRIHKE 797
Q + C+ ++ ++P+ L +G I +EF E++R+ R+S+ LQ I E
Sbjct: 868 QAEKSCKSSIANRIELSPVLELFHAGNDSVRGICVEFLSELVRLNRRTSSNQTLQIIKDE 927
Query: 798 GNINILHILKLSLQQLQSDYQLLAANLLLQLDTLENTTGKSVFTEEAMQVILKAVASEES 857
G + +H + LQ ++Q+ A+LLLQLD L S++ EEA++ +++A+ ++
Sbjct: 928 GAFSTMHTFLVYLQMAPMEHQIAVASLLLQLDLLAEPRKMSIYREEAVETLIEALWQKDF 987
Query: 858 STMQLLSSFILSNIGGTFSWTGEPYTVAWLVKKAGLNSSWLQNMIRNFDWLDQSLQD--- 914
S Q+ + L + G + +G+ YT A L+K AG + + N++ + L S D
Sbjct: 988 SNNQMKALDALLFLIGHVTSSGKSYTEAGLLKIAGFDQPY--NVLMKAEQLGHSDNDFME 1045
Query: 915 ------RGVDSWSSKIAKSII--EIGKPIYYALEKGLKSKTKSVCRDSLTTIAWLSFEVS 966
+ SW ++A + E G I+ ALE+ LKS + + + L WL+ +
Sbjct: 1046 TMEDEKNAMKSWQKRVASVLCNHENGS-IFQALEECLKSNSLKMAKSCLVLATWLTHMLF 1104
Query: 967 KSPNS-VRHSACQILLDGVEQFLHPGLELEERLLACLCIYNYASGKGMQKLIR-SSEGVR 1024
P++ VR A + LL+ + L LEE++LA L + ++ S + +++R ++ +
Sbjct: 1105 TLPDTGVRDVARKSLLEALMNVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIY 1164
Query: 1025 ESLRRLSNVTWMAEELHKAADYYLPNISRISCVH----TQILEASHKCSGAVTALIYYKG 1080
LR+L + +A ++ KA L N++ + +++E +G V +L Y G
Sbjct: 1165 RILRKLKKYSTVAADILKA----LLNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNG 1220
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
+ SG +DG+IK+WD +K+ ++ + +EH+KAVT SL + L S S DKTI VW +
Sbjct: 1221 QVLSGHADGTIKVWDARKRIPRVIQETREHKKAVT--SLCSSVDKLYSSSLDKTIRVWTI 1278
Query: 1141 VQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDSSRTLKDIYRSKGIKSMSVV 1200
++ I+V KE + +L K TQG +KV + K I +K +K ++V
Sbjct: 1279 KPDGIKCIDVYDVKEAVYELAANAKLACYVTQGTGVKVFNWLDAPKFINFNKYVKCLAVS 1338
Query: 1201 QGKIYIGCMDSSIQELAVSNNVEREIKAPFKSWR--LQSKPINSLVVYKDWLYSASSSVE 1258
K+Y GC SIQE+ +S F R L + I+SL ++ D L++ SS++
Sbjct: 1339 GDKLYCGCSGYSIQEVDLSKYTSTSF---FTGTRKLLGKQTIHSLQIHDDLLFACGSSID 1395
Query: 1259 GSNIKEWRRHRKPQISIAPEKGTTIQAMAVVEDFIYLNYNSSASSLQIWLRGTQQKVGRI 1318
+ K + K + + G + +A+ DFI+ + ++++WL+ +V I
Sbjct: 1396 ATAGKIFSLSSKMVVG-SLSTGLDVHRVAINSDFIFA--GTKFGTIEVWLKDKFTRVASI 1452
Query: 1319 ---SAGSKITSLLTAND--IVLCGTETGLIKGW 1346
+KITSL + D ++ G+ G I+ W
Sbjct: 1453 KMAGGNTKITSLASDADGMMLFVGSSDGKIQVW 1485
Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 221/840 (26%), Positives = 408/840 (48%), Gaps = 90/840 (10%)
Query: 534 ISSLFFSGDLRKCNKDYVVEVTTLYKMLNSKTGVKYDMLQDVILEQLLTAISASKEETVI 593
I+SL S +L+ C + V+E+ L+K + + + + ++ L+ +SAS V+
Sbjct: 667 ITSLCTSENLQDCEQ-AVLEIARLWKDSKTDPQIHSYLSKPTVVSGLVEILSASLNREVL 725
Query: 594 RASVSILTTIILANESVIEDIKKKGLRLSDLATALKRNVPEAAILIYLIKPSPTEIKTLE 653
R S+ IL+ +I ++E V E + LA LK + EAA+LIY ++P ++ E
Sbjct: 726 RRSIYILSELIFSDERVGETLNSVDSDFDCLAMLLKNGLAEAALLIYQLRPVFAQLSEHE 785
Query: 654 LLPTLVEVICTSKLYKGKLESVR-----LTPPAASLMIIEVLVTAFDYATNNMHLAAINS 708
L+P+L++VI + K E + + P AA++ I+E ++ D +++ +++ S
Sbjct: 786 LIPSLIQVI------QNKSEDIDDFQLAIDPKAAAIAILEQILIGGDEYNRSVNASSVIS 839
Query: 709 PRVLCGLLDVARH-QNLEELISLATILVKCIQFDGQCRKYLSEFTAVAPLACLLQSGEKR 767
G+ + ++ E + +IL+ C+Q + C+ ++ ++P+ L +G
Sbjct: 840 AN---GIPAIVKYLDKTEGRRPVISILLCCMQAEKSCKSSIANRIELSPVLELFHAGNDS 896
Query: 768 AIMIALEFFHEILRIPR-SSAIDLLQRIHKEGNINILHILKLSLQQLQSDYQLLAANLLL 826
I +EF E++R+ R +S+ LQ I EG + +H + LQ ++Q+ A+LLL
Sbjct: 897 VRGICVEFLSELVRLNRRTSSNQTLQIIKDEGAFSTMHTFLVYLQMAPMEHQIAVASLLL 956
Query: 827 QLDTLENTTGKSVFTEEAMQVILKAVASEESSTMQLLSSFILSNIGGTFSWTGEPYTVAW 886
QLD L S++ EEA++ +++A+ ++ S Q+ + L + G + +G+ YT A
Sbjct: 957 QLDLLAEPRKMSIYREEAVETLIEALWQKDFSNNQMKALDALLFLIGHVTSSGKSYTEAG 1016
Query: 887 LVKKAGLNSSWLQNMIRNFDWLDQSLQD---------RGVDSWSSKIAKSII--EIGKPI 935
L+K AG + + N++ + L S D + SW ++A + E G I
Sbjct: 1017 LLKIAGFDQPY--NVLMKAEQLGHSDNDFMETMEDEKNAMKSWQKRVASVLCNHENGS-I 1073
Query: 936 YYALEKGLKSKTKSVCRDSLTTIAWLSFEVSKSPNS-VRHSACQILLDGVEQFLHPGLEL 994
+ ALE+ LKS + + + L WL+ + P++ VR A + LL+ + L L
Sbjct: 1074 FQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTGVRDVARKSLLEALMNVLQSSKNL 1133
Query: 995 EERLLACLCIYNYASGKGMQKLIR-SSEGVRESLRRLSNVTWMAEELHKAADYYLPNISR 1053
EE++LA L + ++ S + +++R ++ + LR+L + +A ++ KA L N++
Sbjct: 1134 EEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKA----LLNLNS 1189
Query: 1054 ISCVH----TQILEASHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKE 1109
+ +++E +G V +L Y G + SG +DG+IK+WD +K+ ++ + +E
Sbjct: 1190 VDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWDARKRIPRVIQETRE 1249
Query: 1110 HRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFA 1169
H+KAVTS L + L S S DKTI VW + ++ I+V KE + +L K
Sbjct: 1250 HKKAVTS--LCSSVDKLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANAKLACY 1307
Query: 1170 STQGHRMKVIDSSRTLKDIYRSKGIKSMSVVQGKIYIGCMDSSIQELAVSNNVEREIKAP 1229
TQG +KV + K I +K +K ++V K+Y GC SIQE+ +S
Sbjct: 1308 VTQGTGVKVFNWLDAPKFINFNKYVKCLAVSGDKLYCGCSGYSIQEVDLSKYTSTSF--- 1364
Query: 1230 FKSWR--LQSKPINSLVVYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMA 1287
F R L + I+SL ++ D L++ SS++
Sbjct: 1365 FTGTRKLLGKQTIHSLQIHDDLLFACGSSID----------------------------- 1395
Query: 1288 VVEDFIYLNYNSSASSLQIWLRGTQQKVGRISAGSKITSLLTANDIVLCGTETGLIKGWI 1347
A++ +I+ ++ VG +S G + + +D + GT+ G I+ W+
Sbjct: 1396 -------------ATAGKIFSLSSKMVVGSLSTGLDVHRVAINSDFIFAGTKFGTIEVWL 1442
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 26 EIIRALVVSINEFILEFITHVERWHALKLRCASKL-----NMKRKEFFEFSEHSILSNLY 80
+I+R L +I+ FI + + + E+ K +CA +L N ++ E+S+ ++L+NL
Sbjct: 13 DIVRFLTTTIDSFIQDRLINKEQRTQHKDQCAERLAAEDGNTDKETEVEYSDQAVLANLD 72
Query: 81 WGIDSIEAAIQAEWPEEKARRLCNSERLLQAPALLDEQEVTSGIPNCYLVSCAYFYLSVI 140
WGI+++E AI E K RL +E++LQ A+L+ ++ T+G+PN YL + A+ LS +
Sbjct: 73 WGIEALEEAINTYNMETKLARLDYAEKMLQVCAMLNPKQKTAGVPNSYLSAWAHLNLSYL 132
Query: 141 KKLQEDELQVALHFLQALSVYPRLIGTEFAPELCKCLFPSLGLPKLQAMSG 191
KL+ + H L+ V P +FAPEL K LF LP + ++ G
Sbjct: 133 WKLRNNIKSCIYHSLEMFIVDPFFSRIDFAPELWKNLF----LPHMSSIVG 179
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium discoideum GN=mhkB PE=2
SV=1
Length = 732
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 21/243 (8%)
Query: 1070 GAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSG 1129
G V ++ Y L SG SD SIK+WD+KK + ++ H K V + L + + L SG
Sbjct: 503 GPVESICYNDQYLFSGSSDHSIKVWDLKKLRCIFT--LEGHDKPVHTVLLND--KYLFSG 558
Query: 1130 SADKTIGVWQMVQRKLELIEVIATK-EPIRKLDTYGKTIFASTQGHRMKVIDSSRTLKDI 1188
S+DKTI VW + + LE + + ++ L G+ +F+ + +KV D +T +
Sbjct: 559 SSDKTIKVWDL--KTLECKYTLESHARAVKTLCISGQYLFSGSNDKTIKVWD-LKTFRCN 615
Query: 1189 YRSKG----IKSMSVVQGKIYIGCMDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLV 1244
Y KG + ++ ++ +Y G D +I+ V N E A R + + +V
Sbjct: 616 YTLKGHTKWVTTICILGTNLYSGSYDKTIR---VWNLKSLECSATL---RGHDRWVEHMV 669
Query: 1245 VYKDWLYSASSSVEGSNIKEWRRHRKPQISIAPEKGTTIQAMAVVEDFIYLNYNSSASSL 1304
+ L++AS + + IK W + T+Q +AV ED + S S+
Sbjct: 670 ICDKLLFTAS---DDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSI 726
Query: 1305 QIW 1307
++W
Sbjct: 727 RVW 729
>sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=MDV1 PE=3 SV=1
Length = 711
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 1078 YKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGV 1137
+ L +G DG I++WD++ + V ++ H A+TS +++SGS D TI +
Sbjct: 573 FDAALATGTKDGLIRLWDMRTGEVVRV--LEGHMDAITSLKF--DATTIISGSLDGTIRL 628
Query: 1138 WQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVID 1180
W + R L ++I+ ++PI LD K I ++ H + D
Sbjct: 629 WDL--RSNNLTDIISYEKPISSLDFDAKHIVVASNEHNTHIYD 669
>sp|Q6DRF9|WDR55_DANRE WD repeat-containing protein 55 OS=Danio rerio GN=wdr55 PE=2 SV=2
Length = 387
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 1004 IYNYASGKGMQKLIRSSEGVRESLRRLSNVTWMAEELHKAADYYLPNISRISCVHTQILE 1063
+++Y+ +G K + SS +S R++ L + L ++S+ +H +E
Sbjct: 61 LFSYSCTEGENKELWSSGHHLKSCRKV---------LFSSDGQKLFSVSKDKAIHIMDVE 111
Query: 1064 A---------SHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAV 1114
A +HK LI + + +G +G++K+WD++K ++ + D+K H +
Sbjct: 112 AGKLETRIPKAHKVPINAMLLID-ENIFATGDDEGTLKVWDMRKGTSFM--DLKHHEDYI 168
Query: 1115 TSFSLFEPGESLLSGSADKTIGVWQMVQRKLELIEVI 1151
+ ++ + +LL+ S D T+GV+ + +R+ EL+ I
Sbjct: 169 SDITIDQAKRTLLTSSGDGTLGVFNIKRRRFELLSEI 205
>sp|A7TNS8|CAF4_VANPO CCR4-associated factor 4 homolog OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=CAF4 PE=3 SV=1
Length = 669
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 1065 SHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGE 1124
+H + + +L ++ L SG DG I++WD++ S ++ ++ H A+TS
Sbjct: 516 AHSEAPTIGSLQCFESALASGTKDGLIRLWDLR--SGKVIRILEGHTDAITSLKF--DMT 571
Query: 1125 SLLSGSADKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVI 1179
+L++GS DK I +W M R L+ + P+ LD + ++T G ++
Sbjct: 572 NLITGSLDKNIRIWDM--RNWSLVNSYGYQSPVWSLDFNSANVVSATGGKTSEIF 624
Score = 34.3 bits (77), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 17/79 (21%)
Query: 1081 LLCSGFSDGSIKMWDIKK---------------QSAMLVWDVKEHRKAVTSFSLFEPGES 1125
++ SG D +++WDIKK + +++ H ++S S +
Sbjct: 410 IIISGGRDSLVRLWDIKKFQDYSTNYNDIENYYEETNCIFECDSHSDEISSISY--DNFN 467
Query: 1126 LLSGSADKTIGVWQMVQRK 1144
LL+GS DKTI W ++ K
Sbjct: 468 LLTGSQDKTIKHWDLITGK 486
>sp|P87177|YB1C_SCHPO Uncharacterized WD repeat-containing protein C3D6.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC3D6.12 PE=1 SV=1
Length = 922
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 1068 CSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
CS VT + + + G++DGSI++W K +L+ + H+ AVT+ + G L
Sbjct: 65 CSAKVTCIANFDEMYAVGYADGSIRLW---KDGELLI-TLNGHKSAVTTMDFDKMGTRLA 120
Query: 1128 SGSADKTIGVWQMVQRKLELIEVIATKEPIRKL 1160
SGS D I VW +V + L + K+ I KL
Sbjct: 121 SGSMDTDIIVWDIVA-ETGLFRLRGHKDQITKL 152
>sp|P36130|CAF4_YEAST CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAF4 PE=1 SV=3
Length = 643
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 1072 VTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSA 1131
+ AL Y L +G DG +++WD++ + + ++ H +TS E L++GS
Sbjct: 492 IGALQCYNSALATGTKDGIVRLWDLRVGKPVRL--LEGHTDGITSLKF--DSEKLVTGSM 547
Query: 1132 DKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDSSR 1183
D ++ +W + R +++VIA P+ LD GK I + V + R
Sbjct: 548 DNSVRIWDL--RTSSILDVIAYDLPVSSLDFDGKLITVGANEGGVNVFNMER 597
>sp|A6ZZZ8|CAF4_YEAS7 CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain YJM789)
GN=CAF4 PE=3 SV=2
Length = 645
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 1072 VTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSA 1131
+ AL Y L +G DG +++WD++ + + ++ H +TS E L++GS
Sbjct: 494 IGALQCYNSALATGTKDGLVRLWDLRVGKPVRL--LEGHTDGITSLKF--DSEKLVTGSM 549
Query: 1132 DKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDSSR 1183
D ++ +W + R +++VIA P+ LD GK I + V + R
Sbjct: 550 DNSVRIWDL--RTSSILDVIAYDLPVSSLDFDGKLITVGANEGGVNVFNMER 599
>sp|B2ZZS9|WDR55_ORYLA WD repeat-containing protein 55 OS=Oryzias latipes GN=wdr55 PE=1 SV=1
Length = 400
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 1048 LPNISRISCVHTQILEASHKCS---GAVTA-----LIYYKGLLCSGFSDGSIKMWDIKKQ 1099
L ++SR VH +E S GA A L+ + +L +G G++K+WD++K
Sbjct: 115 LYSVSRDKAVHQLDVERGQLVSRIRGAHAAAINSLLLVDENILATGDDRGTLKVWDMRKG 174
Query: 1100 SAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRKLELI 1148
A + D+K H ++ ++ + LL+ S D T+GV+ + +R+ EL+
Sbjct: 175 EAFM--DLKHHDDYISDIAVDQAKRILLTTSGDGTMGVFNIKRRRFELL 221
>sp|Q2HJH6|SNR40_BOVIN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus
GN=SNRNP40 PE=2 SV=1
Length = 358
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L+C+G DG++K+WDI+K++A+ + ++ V + + + + ++SG D I VW +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 1141 VQRKL 1145
Q KL
Sbjct: 224 RQNKL 228
>sp|Q6PE01|SNR40_MOUSE U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus
GN=Snrnp40 PE=2 SV=1
Length = 358
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L+C+G DG++K+WDI+K++A+ + ++ V + + + + ++SG D I VW +
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTF---QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 1141 VQRKL 1145
Q KL
Sbjct: 224 RQNKL 228
>sp|Q96DI7|SNR40_HUMAN U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens
GN=SNRNP40 PE=1 SV=1
Length = 357
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L+C+G DG++K+WDI+K++A+ + ++ V + + + + ++SG D I VW +
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 1141 VQRKL 1145
Q KL
Sbjct: 223 RQNKL 227
>sp|Q5RF51|SNR40_PONAB U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii
GN=SNRNP40 PE=2 SV=1
Length = 357
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L+C+G DG++K+WDI+K++A+ + ++ V + + + + ++SG D I VW +
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTF---QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 1141 VQRKL 1145
Q KL
Sbjct: 223 RQNKL 227
>sp|Q9NWT1|PK1IP_HUMAN p21-activated protein kinase-interacting protein 1 OS=Homo sapiens
GN=PAK1IP1 PE=1 SV=2
Length = 392
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 1069 SGAVTALIYYKGL-LCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
SG +T L +Y L SG DG I +WD KK + +K H+ VT S+ G+ L
Sbjct: 82 SGTITCLKFYGNRHLISGAEDGLICIWDAKKWECLK--SIKAHKGQVTFLSIHPSGKLAL 139
Query: 1128 SGSADKTIGVWQMVQRKLELIEVI 1151
S DKT+ W +V+ + I+ I
Sbjct: 140 SVGTDKTLRTWNLVEGRSAFIKNI 163
>sp|Q12220|UTP12_YEAST U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DIP2 PE=1 SV=1
Length = 943
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
LL G++DG IK+WD+ ++ +L + H+ A+T G L+SGS D I VW +
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLL--NFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDL 150
Query: 1141 V 1141
V
Sbjct: 151 V 151
Score = 39.3 bits (90), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 1050 NISRISCVHTQILEASHKCSGAVTALIYYKGLLCS-GFSDGSIKMWDIKKQSAMLVWDVK 1108
NI C+ T +C A+T GLL G +G ++++D+ S + D
Sbjct: 418 NIKTHKCIRT------FECGYALTCKFLPGGLLVILGTRNGELQLFDLASSSLL---DTI 468
Query: 1109 E--HRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRKLELIEVIATKE---PIRKL 1160
E H A+ S L G+ L++GSADKT+ W K+E V TK P+ KL
Sbjct: 469 EDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWDF---KVENSLVPGTKNKFLPVLKL 522
>sp|P16649|TUP1_YEAST General transcriptional corepressor TUP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=TUP1 PE=1 SV=2
Length = 713
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L +G D I++WDI+ + +++ ++ H + + S F G+ L+SGS D+T+ +W +
Sbjct: 457 FLATGAEDRLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 514
Query: 1141 VQRKLEL---IEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDS 1181
+ L IE T + D GK I A + ++V DS
Sbjct: 515 RTGQCSLTLSIEDGVTTVAVSPGD--GKYIAAGSLDRAVRVWDS 556
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
LL +G D I++WD+ + + + ++ H + + S F G+ L+SGS D+++ +W +
Sbjct: 268 LLATGAEDKLIRIWDLSTKRIIKI--LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 325
Query: 1141 VQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDSSRTLKDIYRSKGIKSMSVV 1200
+ L I + GK I A + ++V DS + G +
Sbjct: 326 RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS---------TTGFLVERLD 376
Query: 1201 QGKIYIGCMDSSIQELAVSNNVER----EIKAPFKSWRLQSK 1238
G + S+ +A SNN E+ + K W L+ K
Sbjct: 377 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 418
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
LL +G D I++WD+ + + + ++ H + + S F G+ L+SGS D+++ +W +
Sbjct: 269 LLATGAEDKLIRIWDLSTKRIIKI--LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDL 326
Query: 1141 VQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVIDSSRTLKDIYRSKGIKSMSVV 1200
+ L I + GK I A + ++V DS + G +
Sbjct: 327 RTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDS---------TTGFLVERLD 377
Query: 1201 QGKIYIGCMDSSIQELAVSNNVER----EIKAPFKSWRLQSK 1238
G + S+ +A SNN E+ + K W L+ K
Sbjct: 378 SGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGK 419
>sp|Q9DCE5|PK1IP_MOUSE p21-activated protein kinase-interacting protein 1 OS=Mus musculus
GN=Pak1ip1 PE=2 SV=2
Length = 382
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 1069 SGAVTALIYYKGL-LCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
+G VT L ++ L SG DG I +WD+K+ + + K HR VT S+ G+ L
Sbjct: 82 AGTVTCLKFHGNQHLISGAEDGHICIWDVKRWKCLKTF--KAHRGHVTFLSIHPSGKLAL 139
Query: 1128 SGSADKTIGVWQMVQRKLELIEVI 1151
S DKT+ W +++ + I+ I
Sbjct: 140 SVGTDKTLRTWNLIEGRSAFIKNI 163
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Query: 1069 SGAVTALIYYKG----LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEP-G 1123
G ++AL + K +L SG D +++WD+ +M V+ E +V FEP G
Sbjct: 145 GGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMAVF---EGHSSVIRGLTFEPTG 201
Query: 1124 ESLLSGSADKTIGVWQMVQRK-LELIEVIATKEPI 1157
LLSGS DKT+ VW + +R + I V + E I
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
++ S D +IK+WD + +V ++ HR+ V + S L SGS D+TI +W +
Sbjct: 479 IIASASQDKTIKLWD--SSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNV 536
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 1050 NISRISCVHTQILEASHKCSGAVTALIYY-KGL-LCSGFSDGSIKMWDIKKQSAMLVWDV 1107
N+ CV T LE +GA+ LIY +G + S +DG +K+W + + D
Sbjct: 535 NVDTQQCVQT--LEGH---TGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDN 589
Query: 1108 KEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMV 1141
E R V + + G L+SG AD + VW+ V
Sbjct: 590 HEDR--VWALASRFDGSLLVSGGADAVVSVWKDV 621
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 1078 YKGLLCSGFSDGSIKMWDIKKQ------SAMLVWDVKEHRKAVTSFSLFEPGESLLSGSA 1131
Y L S D ++K +++ Q S VW +K H + V + + + G + S S
Sbjct: 426 YPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQ 485
Query: 1132 DKTIGVWQ 1139
DKTI +W
Sbjct: 486 DKTIKLWD 493
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1080 GLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQ 1139
LL SG+SDGSI++W + V++ HR +VT+ + G L+SGS D + VW
Sbjct: 72 ALLASGYSDGSIRIWSMSDYQLQAVFN--GHRGSVTTMTFNRLGNILVSGSKDTEVIVWD 129
Query: 1140 MV 1141
++
Sbjct: 130 II 131
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 1070 GAVTALIYYK--GLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
G+VT + + + +L SG D + +WDI +S + ++ HR +TS L E L+
Sbjct: 102 GSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLF--RLRGHRDQITSVKLLERSNHLI 159
Query: 1128 SGSADKTIGVWQM-VQRKLELIEVIATKEPIRKLD 1161
+ S D I +W Q ++ I + + PI +D
Sbjct: 160 TSSKDGFIKIWDTETQHCIQTI--VGHRNPIWGID 192
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
+ +G +D +K+WD+K Q+ + H AV S + E G L +GS D + +W +
Sbjct: 352 IFGTGAADAVVKIWDLKNQTVAAAF--PGHTAAVRSIAFSENGYYLATGSEDGEVKLWDL 409
Query: 1141 VQRKLELIEVIAT--KEPIRKLDTYGKTIFASTQGHRMKVI 1179
RKL+ ++ A K+PI L F G +++V+
Sbjct: 410 --RKLKNLKTFANEEKQPINSLSFDMTGTFLGIGGQKVQVL 448
>sp|Q5ZKU8|PK1IP_CHICK p21-activated protein kinase-interacting protein 1-like OS=Gallus
gallus GN=PAK1IP1 PE=2 SV=1
Length = 369
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 23/115 (20%)
Query: 1069 SGAVTALIYY-KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
+G +T L +Y L SG DG I +W+ K+ + +K H+ VTS S+ G+ L
Sbjct: 75 NGTITCLEFYGTAHLLSGAEDGLICIWNTKRWECLK--SIKAHKGHVTSLSIHPSGKLAL 132
Query: 1128 SGSADKTIGVWQMVQRKLELIE--------------------VIATKEPIRKLDT 1162
S DKT+ W +V+ + I+ VI K I KLDT
Sbjct: 133 SVGTDKTLRTWNLVEGRSAFIKNLKQNAHIIKWSPDGEKYVTVITNKVDIYKLDT 187
>sp|Q60584|FBXW2_MOUSE F-box/WD repeat-containing protein 2 OS=Mus musculus GN=Fbxw2 PE=2
SV=2
Length = 422
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1069 SGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLS 1128
S V AL Y GLLC+G D S K+WD+ + V+ ++ H A F + L++
Sbjct: 148 SARVYALYYKDGLLCTGSDDLSAKLWDV--STGQCVYGIQTHTCAAVKFD----EQKLVT 201
Query: 1129 GSADKTIGVWQ 1139
GS D T+ W+
Sbjct: 202 GSFDNTVACWE 212
>sp|A2CEH0|POC1B_DANRE POC1 centriolar protein homolog B OS=Danio rerio GN=poc1b PE=2 SV=1
Length = 490
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1064 ASHKC-------SGAVTALIYYKGLLC--SGFSDGSIKMWDIKKQSAMLVWDVKEHRKAV 1114
+SH+C G+ T + + C S +D +IK+WDI+ L+ K H V
Sbjct: 174 SSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNK--LIQHYKVHNAGV 231
Query: 1115 TSFSLFEPGESLLSGSADKTIGVWQMVQRKL 1145
FS G L+SGS+D TI + +++ +L
Sbjct: 232 NCFSFHPSGNYLISGSSDSTIKILDLLEGRL 262
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 OS=Mus musculus
GN=Taf5 PE=2 SV=1
Length = 801
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L +G +DG + +WDI ++V ++K H V S GE L SGS D T+ +W
Sbjct: 684 FLATGATDGRVLLWDIGH--GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
Query: 1141 VQ 1142
V+
Sbjct: 742 VK 743
>sp|Q9UKT8|FBXW2_HUMAN F-box/WD repeat-containing protein 2 OS=Homo sapiens GN=FBXW2 PE=1
SV=2
Length = 454
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1069 SGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLS 1128
S V AL Y GLLC+G D S K+WD+ + V+ ++ H A F + L++
Sbjct: 148 SARVYALYYKDGLLCTGSDDLSAKLWDV--STGQCVYGIQTHTCAAVKFD----EQKLVT 201
Query: 1129 GSADKTIGVWQ 1139
GS D T+ W+
Sbjct: 202 GSFDNTVACWE 212
>sp|Q58D00|FBXW2_BOVIN F-box/WD repeat-containing protein 2 OS=Bos taurus GN=FBXW2 PE=2 SV=1
Length = 454
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1069 SGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLS 1128
S V AL Y GLLC+G D S K+WD+ + V+ ++ H A F + L++
Sbjct: 148 SARVYALYYKDGLLCTGSDDLSAKLWDV--STGQCVYGIQTHTCAAVKFD----EQKLVT 201
Query: 1129 GSADKTIGVWQ 1139
GS D T+ W+
Sbjct: 202 GSFDNTVACWE 212
>sp|P47025|MDV1_YEAST Mitochondrial division protein 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MDV1 PE=1 SV=1
Length = 714
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1071 AVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGS 1130
++ AL + L +G DG +++WD++ S ++ +K H A+TS L++GS
Sbjct: 568 SIGALQSFDAALATGTKDGVVRLWDLR--SGKVIRTLKGHTDAITSLKF--DSACLVTGS 623
Query: 1131 ADKTIGVWQMVQRKLELIEVIATKEPIRKLDTY 1163
D+T+ +W + R L + A P+ LD +
Sbjct: 624 YDRTVRIWDL--RTGLLNKFHAYSAPVLSLDLF 654
Score = 33.9 bits (76), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1080 GLLCS-GFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVW 1138
G LC+ G+ D ++K+WD+ KQ+ + ++ H + + +L++G D + +W
Sbjct: 411 GTLCTAGYLDHTVKIWDLSKQNK--IGELAGHLATINCMQINRDYGTLVTGGRDAALKLW 468
Query: 1139 QM 1140
+
Sbjct: 469 NL 470
>sp|A6ZQL5|MDV1_YEAS7 Mitochondrial division protein 1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=MDV1 PE=3 SV=1
Length = 714
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1071 AVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGS 1130
++ AL + L +G DG +++WD++ S ++ +K H A+TS L++GS
Sbjct: 568 SIGALQSFDAALATGTKDGVVRLWDLR--SGKVIRTLKGHTDAITSLKF--DSACLVTGS 623
Query: 1131 ADKTIGVWQMVQRKLELIEVIATKEPIRKLDTY 1163
D+T+ +W + R L + A P+ LD +
Sbjct: 624 YDRTVRIWDL--RTGLLNKFHAYSAPVLSLDLF 654
Score = 33.9 bits (76), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 1080 GLLCS-GFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVW 1138
G LC+ G+ D ++K+WD+ KQ+ + ++ H + + +L++G D + +W
Sbjct: 411 GTLCTAGYLDHTVKIWDLSKQNK--IGELAGHLATINCMQINRDYGTLVTGGRDAALKLW 468
Query: 1139 QM 1140
+
Sbjct: 469 NL 470
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 1071 AVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGS 1130
A+ AL + L +G DG +++WD++ S +V ++ H A+TS +L++G+
Sbjct: 559 AIGALQCFDAALATGTKDGIVRLWDLR--SGKVVRMLEGHTDAITSLQF--DSVNLVTGA 614
Query: 1131 ADKTIGVWQMVQRKLELIEVIATKEPIRKL 1160
D++I +W + R L +V A ++PI L
Sbjct: 615 MDRSIRIWDL--RTGILSDVFAYEQPITSL 642
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 1082 LCSGFSDGSIKMWDIKKQSA-----------MLVWDVKEHRKAVTSFSLFEPGESLLSGS 1130
L +G D +K+WDI K A ++ H +T+ S G++L+SGS
Sbjct: 454 LITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISF--DGDNLVSGS 511
Query: 1131 ADKTIGVWQMVQRK-LELIEVIATKEPIR 1158
D+T+ W + K + I++ P+R
Sbjct: 512 QDRTVRQWDLNSGKCTQTIDISFATGPMR 540
>sp|B2RZ17|FBXW2_RAT F-box/WD repeat-containing protein 2 OS=Rattus norvegicus GN=Fbxw2
PE=2 SV=1
Length = 454
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1069 SGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLS 1128
S V AL Y GLLC+G D S K+WD+ + V+ ++ H A F + L++
Sbjct: 148 SARVYALYYKDGLLCTGSDDLSAKLWDV--STGQCVYGIQTHTCAAVKFD----EQKLVT 201
Query: 1129 GSADKTIGVWQ 1139
GS D T+ W+
Sbjct: 202 GSFDNTVACWE 212
>sp|A1L112|WDR55_RAT WD repeat-containing protein 55 OS=Rattus norvegicus GN=Wdr55 PE=2
SV=1
Length = 384
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 1075 LIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKT 1134
L+ + +L +G G I++WD +K+ ++ D+++H + + +L + LL+ S D
Sbjct: 134 LLVDENVLVTGDDTGGIRLWDQRKEGPLM--DMRQHEEYIADMALDPAKKLLLTASGDGC 191
Query: 1135 IGVWQMVQRKLELI 1148
+GV+ + +R+ EL+
Sbjct: 192 LGVFNIKRRRFELL 205
>sp|Q58DT8|WDR55_BOVIN WD repeat-containing protein 55 OS=Bos taurus GN=WDR55 PE=2 SV=1
Length = 382
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 1075 LIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKT 1134
L+ + +L +G G I++WD +K+ ++ D+++H + + +L + LL+ S D
Sbjct: 134 LLVDENVLATGDDTGGIRLWDQRKEGPLM--DMRQHEEYIADMALDPDKKLLLTASGDGC 191
Query: 1135 IGVWQMVQRKLELI 1148
+GV+ + +R+ EL+
Sbjct: 192 LGVFNIKRRRFELL 205
>sp|Q9CX97|WDR55_MOUSE WD repeat-containing protein 55 OS=Mus musculus GN=Wdr55 PE=2 SV=2
Length = 388
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 1073 TALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSAD 1132
+ L+ + L +G G I++WD +K+ ++ D+++H + + +L + LL+ S D
Sbjct: 133 SVLLVDENALVTGDDTGGIRLWDQRKEGPLM--DMRQHEEYIADMALDPAKKLLLTASGD 190
Query: 1133 KTIGVWQMVQRKLELI 1148
+GV+ + +R+ EL+
Sbjct: 191 GCLGVFNIKRRRFELL 206
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 OS=Homo sapiens
GN=TAF5 PE=1 SV=3
Length = 800
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L +G +DG + +WDI ++V ++K H V S GE L SGS D T+ +W
Sbjct: 683 FLATGATDGRVLLWDIGH--GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
Query: 1141 VQ 1142
++
Sbjct: 741 IK 742
>sp|P56094|TUP1_KLULA General transcriptional corepressor TUP1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TUP1 PE=1 SV=2
Length = 682
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
L +G D I++WD+ ++ +V +K H + + S F G L+SGS D+T+ +W +
Sbjct: 420 FLATGAEDKLIRIWDL--ETKKIVMTLKGHEQDIYSLDYFPSGNKLVSGSGDRTVRIWDL 477
Query: 1141 V 1141
Sbjct: 478 T 478
>sp|Q5R9T6|WDR55_PONAB WD repeat-containing protein 55 OS=Pongo abelii GN=WDR55 PE=2 SV=1
Length = 383
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 967 KSPNSVRHSACQILLDGVEQFL--HPGLEL--EERLLACLCIYNYASGKGMQKLIRSSEG 1022
++P +R + I+L+ L HP +L + + +++Y+ +G K + SS
Sbjct: 23 EAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGH 82
Query: 1023 VRESLRRLSNVTWMAEELHKAADYYLPNISRISCVHTQILEASH------KCSGAV--TA 1074
++ R ++ +E+ K L +S+ +H +E K GA +
Sbjct: 83 HLKACRAVA----FSEDGQK-----LVTVSKDKAIHVLDVEQGRLERRISKAHGAPINSL 133
Query: 1075 LIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKT 1134
L+ + +L +G G I++WD +K+ ++ D+++H + + +L + LL+ S D
Sbjct: 134 LLVDENVLATGDDMGGIRLWDQRKEGPLM--DMRQHEEYIADMALDPAKKLLLTASGDGC 191
Query: 1135 IGVWQMVQRKLELI 1148
+GV+ + +R+ EL+
Sbjct: 192 LGVFNIKRRRFELL 205
>sp|P0CS42|LIS1_CRYNJ Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=PAC1 PE=3 SV=1
Length = 433
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1080 GLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQ 1139
GL+ + SD ++K+WD Q V + H +V+S GE+L+S S DKTI VWQ
Sbjct: 160 GLMATCSSDLTLKLWDTANQYTN-VKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQ 218
Query: 1140 M 1140
+
Sbjct: 219 V 219
>sp|P0CS43|LIS1_CRYNB Nuclear distribution protein PAC1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=PAC1 PE=3 SV=1
Length = 433
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 1080 GLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQ 1139
GL+ + SD ++K+WD Q V + H +V+S GE+L+S S DKTI VWQ
Sbjct: 160 GLMATCSSDLTLKLWDTANQYTN-VKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQ 218
Query: 1140 M 1140
+
Sbjct: 219 V 219
>sp|O94620|CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf17 PE=1 SV=1
Length = 340
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 1085 GFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM---- 1140
G DG+IK+WD++ V +K H+ +TS ++ + G SLLS S D T+ ++ +
Sbjct: 195 GGIDGAIKIWDLRNNHCSHV--LKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFA 252
Query: 1141 -VQRKLELIE 1149
QR+L++ E
Sbjct: 253 SAQRQLQIFE 262
>sp|A7THX0|MDV1_VANPO Mitochondrial division protein 1 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=MDV1 PE=3 SV=1
Length = 706
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 1078 YKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGV 1137
+ L +G DG +++WD++ S +V H AVTS +L+SGS DK+I
Sbjct: 567 FDAALATGTRDGLVRLWDMR--SGKVVRTFMGHTNAVTSLKF--DSYNLISGSLDKSIRT 622
Query: 1138 WQMVQRKLELIEVIATKEPIRKLD 1161
W + R L ++ A P+ +D
Sbjct: 623 WDL--RTGSLSDLFAYDSPVYSID 644
>sp|Q6TNS2|PK1IP_DANRE p21-activated protein kinase-interacting protein 1-like OS=Danio
rerio GN=pak1ip1 PE=2 SV=1
Length = 368
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 12/201 (5%)
Query: 1070 GAVTALIYY-KGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLS 1128
G ++ L +Y L SG DG I +W KK + ++ H+ VTS S+ G+ LS
Sbjct: 88 GTISCLEFYGTSHLLSGGQDGLICVWSTKKWECLKT--IRAHKGQVTSLSVHPSGKLALS 145
Query: 1129 GSADKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKV--IDSSRTLK 1186
DKT+ W +++ + I+ I I G +A ++ + +DS+ +
Sbjct: 146 VGTDKTLRTWNLIEGRSAFIKNIKQNAEIVLWSPDGDK-YAVVVNDKVDIYTLDSATIIG 204
Query: 1187 DIYRSKGIKSMSVVQGKIY-IGCMDSSIQELAVSNNVEREIKAPFKSWRLQSKPINSLVV 1245
I +K I + ++ + +G D S++ V++ ++ FK+ + K I S +
Sbjct: 205 TIAFTKRISCLKFLKNSLLAVGGDDESVRIYDVTS---QKCVCEFKAHENRVKAIESF-M 260
Query: 1246 YKDWLYSASSSVEGSNIKEWR 1266
D+ ++S +G IK W+
Sbjct: 261 KDDFCVLVTASNDGF-IKLWK 280
>sp|Q68FJ6|PK1IP_XENLA p21-activated protein kinase-interacting protein 1-like OS=Xenopus
laevis GN=pak1ip1 PE=2 SV=1
Length = 363
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 1069 SGAVTALIYYKGL-LCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLL 1127
+G +T L +Y L SG DG I +W+ KK + K H+ V S S+ G+ L
Sbjct: 80 NGTITCLEFYGNTHLLSGAEDGLICVWNTKKWECQQTF--KAHKGQVLSLSIHPSGKLAL 137
Query: 1128 SGSADKTIGVWQMVQRKLELIEVI 1151
S DKT+ W +V+ + I+ I
Sbjct: 138 SVGTDKTLRTWNLVEGRSAFIKNI 161
>sp|Q4P8R5|MDV1_USTMA Mitochondrial division protein 1 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=MDV1 PE=3 SV=1
Length = 814
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 1072 VTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSA 1131
V + ++ L SG DG ++MWD++ A + H VT E ++SGS
Sbjct: 670 VGGVQFWGYALASGSGDGGVRMWDMRTGQAHRT--LLGHTAPVTCLQFDE--HHIISGSL 725
Query: 1132 DKTIGVWQMVQRKLELIEVIATKEPIRKLDTYGKTIFASTQGHRMKVID 1180
DK+I +W + R + + + + P+ L + I A+T + +K+ +
Sbjct: 726 DKSIRIWDL--RMGSISDTVRYEHPVTALQFDSRKILAATGENGVKLFN 772
>sp|Q54SF9|MHCKD_DICDI Myosin heavy chain kinase D OS=Dictyostelium discoideum GN=mhkD PE=3
SV=1
Length = 941
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 23/153 (15%)
Query: 1076 IYYKG-LLCSGFSDGSIKMWDIKKQSAMLVWDVKE-HRKAVTSFSLFEPGESLLSGSADK 1133
IY G L S +D SIK+WD+ + M V+ + + H +TS +F G L S S D
Sbjct: 791 IYMSGKYLFSSSNDQSIKIWDL--EMCMCVYGMNDAHDAPITSLRMF--GNRLFSASKDG 846
Query: 1134 TIGVWQMV---------QRKLELIEVIATKEP---IRKLDTYGKTIFASTQGHRMKVIDS 1181
I W + Q + + +++ T + D+ + I S Q +K+I S
Sbjct: 847 EIKDWNLSTFQPTTTLDQHNMAITDILVTSNGYLFVSSDDSTIRIIDISNQNEPIKIISS 906
Query: 1182 SRTLKDIYRSKGIKSMSVVQGKIYIGCMDSSIQ 1214
++ +RS G+ S++ +I+ G D+ I+
Sbjct: 907 TKA----HRS-GVNSLATDGKRIFSGGCDNLIK 934
>sp|A7MB12|UTP15_BOVIN U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus
GN=UTP15 PE=2 SV=1
Length = 519
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 1050 NISRISCVHTQILEASHKCSGAVTALIYYKGLLCSGFSDGSIKMWDIKKQSAMLVWDVKE 1109
N S IS H Q +E+ L++ G L +K+WD+ K +LV +K
Sbjct: 197 NQSVISVEHGQPVES---------VLLFPSGGLLVSAGGRYVKVWDMLKGGQLLV-SLKN 246
Query: 1110 HRKAVTSFSLFEPGESLLSGSADKTIGVWQMVQRKL 1145
H K VT L G+ LLSGS D+ + V+ K+
Sbjct: 247 HHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKV 282
Score = 36.2 bits (82), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 1081 LLCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQM 1140
LL +G DG ++++DI ++ + ++ H KAV S ++SG+ D T+ +W +
Sbjct: 94 LLVAGSEDGGVQLFDISGRAPLRQFE--GHTKAVHSVDFTADKYHVVSGADDYTVKLWDI 151
Query: 1141 VQRKLELIEVIATKE 1155
K E++ KE
Sbjct: 152 PNSK----EILTFKE 162
>sp|P93107|PF20_CHLRE Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas
reinhardtii GN=PF20 PE=2 SV=1
Length = 606
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 1082 LCSGFSDGSIKMWDIKKQSAMLVWDVKEHRKAVTSFSLFEPGESLLSGSADKTIGVWQMV 1141
L SG D ++K+WD +KQ + + +H++A+ S GE + SGS D T+ +W +
Sbjct: 383 LASGGGDSAVKIWDFEKQRCVTTF--TDHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLP 440
Query: 1142 QRKLEL 1147
K +
Sbjct: 441 AGKCRM 446
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,324,157
Number of Sequences: 539616
Number of extensions: 18412396
Number of successful extensions: 53063
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 50979
Number of HSP's gapped (non-prelim): 2195
length of query: 1349
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1219
effective length of database: 121,419,379
effective search space: 148010223001
effective search space used: 148010223001
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)