Your job contains 1 sequence.
>000698
MPQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSP
NCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEM
LIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQ
PSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLSYYHDKLAN
GVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQRSFV
CHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSVVNGVPTDPPE
NVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAP
GDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERS
ISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAI
PKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRV
KIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQ
SDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSH
IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQ
KSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLA
VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV
QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK
DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR
HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAG
QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ
SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN
TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV
SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS
CRTLSKVPLLKLLINKVGEQSGILN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000698
(1345 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|J3KPX5 - symbol:DNA2 "DNA replication ATP-depen... 911 9.0e-139 3
UNIPROTKB|P51530 - symbol:DNA2 "DNA replication ATP-depen... 911 9.0e-139 3
UNIPROTKB|Q8QHA5 - symbol:dna2 "DNA replication ATP-depen... 1353 3.1e-138 1
UNIPROTKB|F6UZP1 - symbol:DNA2 "Uncharacterized protein" ... 928 1.5e-136 3
UNIPROTKB|E2QSH2 - symbol:E2QSH2 "Uncharacterized protein... 923 1.7e-136 3
ZFIN|ZDB-GENE-090313-71 - symbol:dna2 "DNA replication he... 1262 2.9e-131 2
UNIPROTKB|E1BMP7 - symbol:DNA2 "DNA replication ATP-depen... 1283 8.1e-131 1
UNIPROTKB|K7DXW3 - symbol:DNA2 "DNA replication nuclease ... 1283 8.1e-131 1
MGI|MGI:2443732 - symbol:Dna2 "DNA replication helicase 2... 1274 7.3e-130 1
UNIPROTKB|Q5ZKG3 - symbol:DNA2 "DNA replication ATP-depen... 1053 2.3e-129 2
UNIPROTKB|Q4S102 - symbol:GSTENG00025786001 "Chromosome 5... 851 5.0e-129 3
RGD|1306791 - symbol:Dna2 "DNA replication helicase 2 hom... 1264 8.4e-129 1
DICTYBASE|DDB_G0274777 - symbol:DDB_G0274777 "DNA replica... 673 5.7e-128 6
POMBASE|SPBC16D10.04c - symbol:dna2 "DNA replication endo... 1211 6.4e-125 2
UNIPROTKB|F1NWZ8 - symbol:DNA2 "DNA replication ATP-depen... 1206 1.2e-122 1
CGD|CAL0002159 - symbol:DNA2 species:5476 "Candida albica... 896 2.9e-117 4
SGD|S000001207 - symbol:DNA2 "Tripartite DNA replication ... 852 1.5e-112 3
UNIPROTKB|F1PYQ4 - symbol:DNA2 "Uncharacterized protein" ... 727 5.3e-110 3
UNIPROTKB|G4MK85 - symbol:MGG_02491 "DNA replication ATP-... 831 5.5e-104 3
UNIPROTKB|F6QXW0 - symbol:dna2 "DNA replication ATP-depen... 1021 4.7e-103 1
UNIPROTKB|J9NRI6 - symbol:DNA2 "Uncharacterized protein" ... 926 2.9e-99 2
FB|FBgn0030170 - symbol:CG2990 species:7227 "Drosophila m... 544 2.8e-93 3
WB|WBGene00001016 - symbol:dna-2 species:6239 "Caenorhabd... 613 2.1e-84 4
UNIPROTKB|H0Y455 - symbol:DNA2 "DNA replication ATP-depen... 701 4.1e-68 1
UNIPROTKB|F8VR31 - symbol:DNA2 "DNA replication ATP-depen... 407 2.3e-61 3
UNIPROTKB|I3LBB7 - symbol:I3LBB7 "Uncharacterized protein... 510 1.2e-47 1
TAIR|locus:2056896 - symbol:AT2G03270 species:3702 "Arabi... 336 1.4e-38 2
POMBASE|SPCC737.07c - symbol:SPCC737.07c "DNA polymerase ... 296 5.0e-34 2
UNIPROTKB|E2R760 - symbol:IGHMBP2 "Uncharacterized protei... 394 1.4e-32 1
UNIPROTKB|E2R8W1 - symbol:IGHMBP2 "Uncharacterized protei... 394 1.4e-32 1
UNIPROTKB|E1C0J4 - symbol:UPF1 "Uncharacterized protein" ... 339 2.2e-32 3
UNIPROTKB|E1BEK9 - symbol:UPF1 "Uncharacterized protein" ... 339 6.0e-32 3
UNIPROTKB|E1C0J3 - symbol:UPF1 "Uncharacterized protein" ... 339 6.1e-32 3
UNIPROTKB|Q92900 - symbol:UPF1 "Regulator of nonsense tra... 339 6.1e-32 3
UNIPROTKB|E2RL81 - symbol:UPF1 "Uncharacterized protein" ... 339 6.1e-32 3
TAIR|locus:2162858 - symbol:AT5G35970 species:3702 "Arabi... 301 6.5e-32 2
ZFIN|ZDB-GENE-040426-2836 - symbol:upf1 "upf1 regulator o... 337 8.8e-32 3
UNIPROTKB|F1SUI6 - symbol:DNA2 "Uncharacterized protein" ... 293 9.0e-32 2
MGI|MGI:107995 - symbol:Upf1 "UPF1 regulator of nonsense ... 337 9.9e-32 3
UNIPROTKB|F1MHU8 - symbol:IGHMBP2 "Uncharacterized protei... 384 1.5e-31 2
UNIPROTKB|E1BQD2 - symbol:C4H4orf21 "Uncharacterized prot... 354 2.3e-31 2
DICTYBASE|DDB_G0271732 - symbol:DDB_G0271732 "AN1-type zi... 382 2.9e-31 1
UNIPROTKB|P38935 - symbol:IGHMBP2 "DNA-binding protein SM... 385 3.2e-31 2
FB|FBgn0030354 - symbol:Upf1 "Upf1" species:7227 "Drosoph... 331 4.4e-31 2
UNIPROTKB|F1RY71 - symbol:IGHMBP2 "Uncharacterized protei... 378 7.3e-31 1
DICTYBASE|DDB_G0268924 - symbol:DDB_G0268924 "Helicase SE... 396 1.5e-30 3
UNIPROTKB|Q6ZU11 - symbol:Q6ZU11 "Uncharacterized protein... 345 3.0e-30 2
DICTYBASE|DDB_G0288923 - symbol:upf1 "regulator of nonsen... 319 1.2e-29 2
RGD|68325 - symbol:Ighmbp2 "immunoglobulin mu binding pro... 365 1.9e-29 1
UNIPROTKB|Q9EQN5 - symbol:Ighmbp2 "DNA-binding protein SM... 365 1.9e-29 1
CGD|CAL0003666 - symbol:NAM7 species:5476 "Candida albica... 311 1.9e-29 3
UNIPROTKB|Q5A507 - symbol:NAM7 "Putative uncharacterized ... 311 1.9e-29 3
UNIPROTKB|G5EA02 - symbol:C4orf21 "Uncharacterized protei... 345 2.4e-29 4
UNIPROTKB|Q60560 - symbol:IGHMBP2 "DNA-binding protein SM... 363 3.0e-29 1
UNIPROTKB|E1BY42 - symbol:E1BY42 "Uncharacterized protein... 361 4.9e-29 1
UNIPROTKB|F1PCI1 - symbol:C4orf21 "Uncharacterized protei... 329 1.9e-28 2
SGD|S000001500 - symbol:HCS1 "Hexameric DNA polymerase al... 288 4.8e-28 2
UNIPROTKB|E1BG37 - symbol:E1BG37 "Uncharacterized protein... 336 5.2e-28 4
DICTYBASE|DDB_G0289529 - symbol:DDB_G0289529 species:4468... 379 6.7e-28 3
TAIR|locus:2171007 - symbol:LBA1 "LOW-LEVEL BETA-AMYLASE ... 307 1.4e-27 2
DICTYBASE|DDB_G0268660 - symbol:DDB_G0268660 "DNA2/NAM7 h... 365 2.0e-27 2
UNIPROTKB|G4ND47 - symbol:MGG_00976 "Regulator-nonsense t... 302 5.6e-27 4
DICTYBASE|DDB_G0268662 - symbol:DDB_G0268662 "DNA2/NAM7 h... 378 8.6e-27 3
MGI|MGI:99954 - symbol:Ighmbp2 "immunoglobulin mu binding... 355 1.0e-26 2
RGD|2322000 - symbol:LOC100363957 "hypothetical protein L... 317 2.1e-26 3
CGD|CAL0003335 - symbol:SEN1 species:5476 "Candida albica... 312 4.9e-26 5
SGD|S000004685 - symbol:NAM7 "ATP-dependent RNA helicase ... 289 3.4e-25 3
DICTYBASE|DDB_G0268914 - symbol:DDB_G0268914 species:4468... 339 3.4e-25 3
WB|WBGene00004880 - symbol:smg-2 species:6239 "Caenorhabd... 277 6.0e-25 3
ASPGD|ASPL0000056713 - symbol:AN0646 species:162425 "Emer... 336 2.2e-24 3
ZFIN|ZDB-GENE-070402-1 - symbol:setx "senataxin" species:... 302 2.3e-23 3
POMBASE|SPAC16C9.06c - symbol:upf1 "ATP-dependent RNA hel... 278 1.3e-22 4
POMBASE|SPBC29A10.10c - symbol:SPBC29A10.10c "tRNA-splici... 282 3.6e-22 3
SGD|S000004422 - symbol:SEN1 "Presumed helicase and subun... 272 4.9e-22 3
FB|FBgn0034187 - symbol:CG6967 species:7227 "Drosophila m... 243 8.7e-22 2
TAIR|locus:2130384 - symbol:MAA3 "MAGATAMA 3" species:370... 264 1.3e-21 3
UNIPROTKB|G3X7G5 - symbol:MOV10L1 "Uncharacterized protei... 286 1.7e-21 2
DICTYBASE|DDB_G0285243 - symbol:DDB_G0285243 "putative sp... 283 3.0e-21 3
UNIPROTKB|G4NIZ8 - symbol:MGG_02784 "DNA-binding protein ... 267 6.3e-21 3
RGD|1306056 - symbol:Pric285 "peroxisomal proliferator-ac... 284 7.5e-21 2
POMBASE|SPAC6G9.10c - symbol:sen1 "ATP-dependent 5' to 3'... 267 1.0e-20 4
UNIPROTKB|Q9P2E3 - symbol:ZNFX1 "NFX1-type zinc finger-co... 247 1.2e-20 3
UNIPROTKB|F1RXR7 - symbol:MOV10L1 "Uncharacterized protei... 280 3.6e-20 1
ZFIN|ZDB-GENE-030131-9089 - symbol:mov10b.1 "Moloney leuk... 208 3.7e-20 2
UNIPROTKB|E2RBM4 - symbol:PRIC285 "Uncharacterized protei... 284 5.1e-20 3
UNIPROTKB|E1C4T7 - symbol:Gga.18015 "Uncharacterized prot... 279 2.3e-19 4
MGI|MGI:2138982 - symbol:Znfx1 "zinc finger, NFX1-type co... 242 2.6e-19 3
UNIPROTKB|Q9BYK8 - symbol:HELZ2 "Helicase with zinc finge... 267 2.9e-19 2
UNIPROTKB|E1BZJ8 - symbol:MOV10L1 "Uncharacterized protei... 297 1.0e-18 4
UNIPROTKB|E1C0Z0 - symbol:HELZ2 "Uncharacterized protein"... 238 1.6e-18 2
CGD|CAL0001700 - symbol:orf19.702 species:5476 "Candida a... 138 4.0e-18 4
TAIR|locus:2135472 - symbol:AT4G05540 species:3702 "Arabi... 231 7.7e-18 2
DICTYBASE|DDB_G0274399 - symbol:DDB_G0274399 "DNA2/NAM7 h... 229 8.9e-18 2
FB|FBgn0041164 - symbol:armi "armitage" species:7227 "Dro... 158 1.0e-17 5
UNIPROTKB|Q7Z333 - symbol:SETX "Probable helicase senatax... 260 2.0e-17 3
UNIPROTKB|D4AEB3 - symbol:Setx "Protein Setx" species:101... 258 1.2e-16 4
CGD|CAL0006154 - symbol:orf19.6199 species:5476 "Candida ... 181 1.2e-16 3
UNIPROTKB|Q5AAW1 - symbol:HCS1 "Putative uncharacterized ... 181 1.2e-16 3
UNIPROTKB|F1RMM8 - symbol:LOC100519780 "Uncharacterized p... 249 1.4e-16 4
TAIR|locus:2166183 - symbol:AT5G37160 species:3702 "Arabi... 218 2.0e-16 2
WARNING: Descriptions of 67 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|J3KPX5 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 OMA:EHESLCH ProteinModelPortal:J3KPX5
Ensembl:ENST00000399180 Uniprot:J3KPX5
Length = 1146
Score = 911 (325.7 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 227/544 (41%), Positives = 313/544 (57%)
Query: 824 LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
L +GD VI+S E L A++ G + EI+ V+ L RN S +S L +R
Sbjct: 598 LMAGDRVIVSGEERSLFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FR 647
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIW 940
+D++E N R +I+D P+F S SV D +
Sbjct: 648 LDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVAC 707
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SA
Sbjct: 708 ILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSA 767
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVA 1055
VDN+L+KL I F+R+G+ + VH IQ+ C S +I S+ +++ + +VA
Sbjct: 768 VDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVA 826
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EA
Sbjct: 827 TTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREA 886
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
R GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA I
Sbjct: 887 RALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVIN 945
Query: 1176 V---SDLS---------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
+ D+ S +PWL P PV F+NTD +PA E + ++N EA L
Sbjct: 946 LRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKL 1005
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILV 1281
I +T VK DIGII PY Q +I L S+ VE++T+DKYQGRDK +LV
Sbjct: 1006 IVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 1065
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
SFVRS+++ LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + +
Sbjct: 1066 SFVRSNKD--GTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEK 1123
Query: 1342 GILN 1345
I++
Sbjct: 1124 LIID 1127
Score = 407 (148.3 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 111/345 (32%), Positives = 185/345 (53%)
Query: 392 KVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
K L + QS E + + L DW + PGD +++ G+ + ++ +LI++PD
Sbjct: 150 KRLVITASQSLENKELCILRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPD 208
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEE 509
+L+SGT +A+S C RR+VL E + S+ + L+GT+LH++FQ + K L+E
Sbjct: 209 MLISGTSIASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQE 267
Query: 510 YARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWI--ILFKD-SQDLNTPTVDFG 564
A +Q ++++ +Y +++++I + + + +P W + K+ S D +
Sbjct: 268 LAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLP 327
Query: 565 SDGLK-----KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
SD K +++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE K
Sbjct: 328 SDNSKDNSTCNIEVVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELK 386
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N S+EHR+QV+LYTLL ER ++GLL YL++ Q V D L+
Sbjct: 387 TGKESN---SIEHRSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLK 442
Query: 680 RRNEFA----NDIIKASTTQQ-----LPPMLRAYGGNKECSGLGN 715
RN+ A + I K++T Q+ LP ++ K CS +GN
Sbjct: 443 LRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKTCKYCSQIGN 487
Score = 85 (35.0 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ EH
Sbjct: 518 HLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHV 574
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K D +++++F +H P N GD +I
Sbjct: 575 KIVCDGQYLHNFQCKHGAIPVTNLMAGDRVI 605
Score = 39 (18.8 bits), Expect = 3.3e-32, Sum P(2) = 3.3e-32
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLG 714
F+ + QQLPP++ N+E LG
Sbjct: 864 FSRRFVLVGDHQQLPPLVL----NREARALG 890
>UNIPROTKB|P51530 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0042645
"mitochondrial nucleoid" evidence=IDA] [GO:0043504 "mitochondrial
DNA repair" evidence=IDA] [GO:0006264 "mitochondrial DNA
replication" evidence=IDA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IDA] [GO:0045740 "positive regulation of DNA
replication" evidence=IDA] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=IDA] [GO:0006284 "base-excision repair"
evidence=IDA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=IDA] [GO:0005760
"gamma DNA polymerase complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000076 "DNA replication checkpoint"
evidence=IMP] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IDA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000729 "DNA double-strand
break processing" evidence=IDA] [GO:0004518 "nuclease activity"
evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0000722 "telomere maintenance via recombination" evidence=TAS]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006271 "DNA strand elongation
involved in DNA replication" evidence=TAS] [GO:0032201 "telomere
maintenance via semi-conservative replication" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0032508 "DNA
duplex unwinding" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0042645 GO:GO:0000084 GO:GO:0016890
eggNOG:COG1112 GO:GO:0045740 GO:GO:0000722 GO:GO:0000729
GO:GO:0017108 Reactome:REACT_383 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:D42046 EMBL:AL136233
EMBL:BC041115 EMBL:BC053574 EMBL:BC063664 EMBL:BC111740
EMBL:BC028188 IPI:IPI00216142 IPI:IPI00816670 IPI:IPI00816801
PIR:T50697 RefSeq:NP_001073918.2 UniGene:Hs.532446
ProteinModelPortal:P51530 SMR:P51530 STRING:P51530
PhosphoSite:P51530 DMDM:119370373 PaxDb:P51530 PRIDE:P51530
Ensembl:ENST00000358410 Ensembl:ENST00000399179
Ensembl:ENST00000549829 GeneID:1763 KEGG:hsa:1763 UCSC:uc021prt.1
GeneCards:GC10M070173 HGNC:HGNC:2939 HPA:HPA037487 MIM:601810
neXtProt:NX_P51530 InParanoid:P51530 GenomeRNAi:1763 NextBio:7187
ArrayExpress:P51530 Bgee:P51530 CleanEx:HS_DNA2
Genevestigator:P51530 GermOnline:ENSG00000138346 GO:GO:0032201
Uniprot:P51530
Length = 1060
Score = 911 (325.7 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 227/544 (41%), Positives = 313/544 (57%)
Query: 824 LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
L +GD VI+S E L A++ G + EI+ V+ L RN S +S L +R
Sbjct: 512 LMAGDRVIVSGEERSLFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FR 561
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIW 940
+D++E N R +I+D P+F S SV D +
Sbjct: 562 LDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVAC 621
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SA
Sbjct: 622 ILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSA 681
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVA 1055
VDN+L+KL I F+R+G+ + VH IQ+ C S +I S+ +++ + +VA
Sbjct: 682 VDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVA 740
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EA
Sbjct: 741 TTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREA 800
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
R GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA I
Sbjct: 801 RALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVIN 859
Query: 1176 V---SDLS---------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
+ D+ S +PWL P PV F+NTD +PA E + ++N EA L
Sbjct: 860 LRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKL 919
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILV 1281
I +T VK DIGII PY Q +I L S+ VE++T+DKYQGRDK +LV
Sbjct: 920 IVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 979
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
SFVRS+++ LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + +
Sbjct: 980 SFVRSNKD--GTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEK 1037
Query: 1342 GILN 1345
I++
Sbjct: 1038 LIID 1041
Score = 407 (148.3 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 111/345 (32%), Positives = 185/345 (53%)
Query: 392 KVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
K L + QS E + + L DW + PGD +++ G+ + ++ +LI++PD
Sbjct: 64 KRLVITASQSLENKELCILRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPD 122
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEE 509
+L+SGT +A+S C RR+VL E + S+ + L+GT+LH++FQ + K L+E
Sbjct: 123 MLISGTSIASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQE 181
Query: 510 YARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWI--ILFKD-SQDLNTPTVDFG 564
A +Q ++++ +Y +++++I + + + +P W + K+ S D +
Sbjct: 182 LAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLP 241
Query: 565 SDGLK-----KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
SD K +++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE K
Sbjct: 242 SDNSKDNSTCNIEVVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELK 300
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N S+EHR+QV+LYTLL ER ++GLL YL++ Q V D L+
Sbjct: 301 TGKESN---SIEHRSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLK 356
Query: 680 RRNEFA----NDIIKASTTQQ-----LPPMLRAYGGNKECSGLGN 715
RN+ A + I K++T Q+ LP ++ K CS +GN
Sbjct: 357 LRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKTCKYCSQIGN 401
Score = 85 (35.0 bits), Expect = 9.0e-139, Sum P(3) = 9.0e-139
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ EH
Sbjct: 432 HLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHV 488
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K D +++++F +H P N GD +I
Sbjct: 489 KIVCDGQYLHNFQCKHGAIPVTNLMAGDRVI 519
Score = 39 (18.8 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLG 714
F+ + QQLPP++ N+E LG
Sbjct: 778 FSRRFVLVGDHQQLPPLVL----NREARALG 804
>UNIPROTKB|Q8QHA5 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8355 "Xenopus laevis" [GO:0000076
"DNA replication checkpoint" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0004518 "nuclease activity" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0006264
"mitochondrial DNA replication" evidence=ISS] [GO:0006284
"base-excision repair" evidence=ISS] [GO:0016890 "site-specific
endodeoxyribonuclease activity, specific for altered base"
evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] InterPro:IPR026851 InterPro:IPR014808
Pfam:PF08696 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0016890 GO:GO:0045740 GO:GO:0000729 GO:GO:0017108
GO:GO:0000076 GO:GO:0043137 GO:GO:0043139 GO:GO:0043142
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOVERGEN:HBG081456
KO:K10742 EMBL:AF474372 RefSeq:NP_001079231.1 UniGene:Xl.17390
ProteinModelPortal:Q8QHA5 GeneID:378492 KEGG:xla:378492
Xenbase:XB-GENE-5829000 Uniprot:Q8QHA5
Length = 1053
Score = 1353 (481.3 bits), Expect = 3.1e-138, P = 3.1e-138
Identities = 356/1000 (35%), Positives = 542/1000 (54%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
V A+ K L + Q G++ + L +DW I PGD +++ G + R+
Sbjct: 62 VYAQREEKHLTITASQEGDDLELCILKDDWVALQIKPGDIIHLEGNCSVDNTWTISRDTG 121
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIP 502
+LI++PD+L+SGT +A C RRSVL E+ K C + S L GT+LH IFQ
Sbjct: 122 YLILYPDLLISGTSIANGIRCLRRSVLSEKFKVCDKGSRQMLNGTMLHDIFQRATTCGF- 180
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFK----DSQDL 556
T L+E A + K ++ +Y +N+ D+ + E +P + W F + Q +
Sbjct: 181 TDSVLQELAHHTVHGPKYLKEMYQLKLNQADVMGEIQEYLPSLSKWATDFMTHPLNQQQI 240
Query: 557 NTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPL 616
N T D + K+SE DIEE W+P++GLKG ID + RVKI K ++ + I+PL
Sbjct: 241 NR-TKSTAGDPTETTKVSEFLDIEENIWSPRFGLKGKIDVTARVKIHQK-SKAHLKIMPL 298
Query: 617 EFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVG 676
E KTGK N S+EHR+QV+LYTLL ER + ++GLL YL++ V R D
Sbjct: 299 ELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGLLLYLKTGNMYTVPGNRLDRRE 354
Query: 677 LIMRRNE---FANDII-------KASTTQQLPPMLRAYGGNKECSGLGN--MFDSHIYHL 724
L+ RNE + +++ K +T LP M+ K CS + N +++ +
Sbjct: 355 LLKIRNELSYYLTNVLHKSDNGSKETTLASLPAMIADRQACKYCSQMRNCALYNRSVEQ- 413
Query: 725 TTAHCSFLRHWDRLIDLEAKEM---QVVKNEIW---CSRGSGGNHFTGCLSSIVLDASNE 778
T +C ++ E + + + +W C+ + +I + +S+E
Sbjct: 414 QTENCYIPPEMIPVVQKETEHLTEDHLQYFRLWYLMCTLEANSKDSKMGRKNIWMMSSSE 473
Query: 779 HQKSYRDNRFVYHFVRQ-HMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTES 836
++ D + + + +R H+ + SD L + + T L SGD V++S E
Sbjct: 474 REE---DGQCIGNLIRTGHVQT----ISDVQYLHSFQRRSGSVPATNLASGDRVVVSGEE 526
Query: 837 DRLAVASGLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVM 895
LA+++G I E+ +++ + L +LP + LL +R+D +E
Sbjct: 527 RFLALSTGYIKEVKDENITCILDRSLVKLP--------EDLL---FRLDHEEGGGGLEFH 575
Query: 896 RYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIWSE-KSLNDDQRRA 952
N R++I+D P F S+ D A + S + LN Q++A
Sbjct: 576 LGNLSRLMENSSVSEKLRKLIIDFSKPNFVQHLSSILPPD-AKDIVASILRGLNKPQKQA 634
Query: 953 IIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS 1012
+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KLK
Sbjct: 635 MKRVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLKKFQ 694
Query: 1013 IDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTD 1068
+ F+R+GR + +H ++Q+ A +I S+ +++ + VVA TC+G+ +P+ T
Sbjct: 695 VGFLRLGRTQKLHPDVQEFSEEEICKAKSIKSLSALEELYNSQPVVATTCMGVNHPIFTR 754
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
++FD CI+DEA Q + P+ LGPL FA +FVLVGDH QLPPLV+S EARE GM SLF+RL
Sbjct: 755 RRFDFCIVDEASQISQPICLGPLFFADRFVLVGDHQQLPPLVKSAEARELGMSESLFKRL 814
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC------ 1182
E + +A+ L QYRM IM LSN L+Y RL C SD ++NA +++ + +
Sbjct: 815 -ERNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVVQLPHIKTLLLELEF 873
Query: 1183 -----SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S W+K+ L P PV F+NT+ +PA E ++ ++N +EA L+ +T+ +K
Sbjct: 874 RESQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFHLTKLYLKAGCR 933
Query: 1238 GKDIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q +I + SLS S+VE++T+DKYQGRDK I+VSFVRS+ + +
Sbjct: 934 PSDIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGK--L 991
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LL DW R+NVALTRAK KLIM+G TL++ L+ LI
Sbjct: 992 GDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLI 1031
>UNIPROTKB|F6UZP1 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH Ensembl:ENSCAFT00000021752
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Uniprot:F6UZP1
Length = 1021
Score = 928 (331.7 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 232/564 (41%), Positives = 323/564 (57%)
Query: 806 DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
DG L D+ T L +GD +ILS E L A++ G + EI+ V+
Sbjct: 461 DGQYLHNFQRKNGDIPVTNLMAGDRIILSGEERTLFALSRGYVKEINVTSVTC------- 513
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPR 923
L RN S +S L +R+D++E N R +I+D P+
Sbjct: 514 LLDRNVSVLPESTL---FRLDQEEKTCDIDTPLGNLSKLMENTCVSQKLRDLIIDFREPQ 570
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F S SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V
Sbjct: 571 FISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV 630
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTSYT+SAVDN+L+KL I F+R+GR + VH++IQK C S
Sbjct: 631 RILYTCGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGRTQKVHQDIQKFTEEEICRSKP 690
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
I S+ +++ + ++VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +
Sbjct: 691 -IKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSQR 749
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L
Sbjct: 750 FVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKL 808
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDML 1204
Y +L CGSD++ANA + + +L S +PW+ A P PV F+NTD +
Sbjct: 809 TYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKV 868
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVS 1261
PA E + ++N EA LI +T +K + DIGII PY Q +I L S+
Sbjct: 869 PAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIR 928
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE++T+DKYQGRDK ILVSFVRS+++ LL DW R+NVA+TRAK KLI++G
Sbjct: 929 MVEVNTVDKYQGRDKSIILVSFVRSNKD--GPIGELLKDWRRLNVAITRAKHKLILLGCV 986
Query: 1322 RTLSKVPLLKLLINKVGEQSGILN 1345
+L++ P L L++ + + I++
Sbjct: 987 PSLNRYPPLGKLLHHLNSEKKIMD 1010
Score = 367 (134.2 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 87/271 (32%), Positives = 149/271 (54%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 55 LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 112
Query: 468 SVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++++ +Y
Sbjct: 113 AVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRHLKEMYR 171
Query: 525 CGVNENDIHKTLVEAIPKMLNWI--ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEM 582
+N+ ++ + + E +P W + + + P+ ++ +++ DIEE
Sbjct: 172 LNLNQEEVKQEVEEYLPSFSKWAGDFMHQYTSIKIVPSDGNNNNSTCNIEVINSLDIEES 231
Query: 583 AWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLL 642
W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q++LYTLL
Sbjct: 232 IWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKELN---SIEHRSQLVLYTLL 287
Query: 643 MSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
ER ++GLL YL++ V D
Sbjct: 288 SQERRADP-EAGLLLYLKTGNMYPVPANHLD 317
Score = 82 (33.9 bits), Expect = 1.5e-136, Sum P(3) = 1.5e-136
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 400 HLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLI---RTECV 456
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K+ D +++++F R++ P N GD +I
Sbjct: 457 KTICDGQYLHNFQRKNGDIPVTNLMAGDRII 487
Score = 39 (18.8 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLG 714
F+ + QQLPP++ N+E LG
Sbjct: 746 FSQRFVLVGDHQQLPPLVL----NREARALG 772
>UNIPROTKB|E2QSH2 [details] [associations]
symbol:E2QSH2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
Ensembl:ENSCAFT00000021752 Uniprot:E2QSH2
Length = 1040
Score = 923 (330.0 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 231/559 (41%), Positives = 320/559 (57%)
Query: 806 DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
DG L D+ T L +GD +ILS E L A++ G + EI+ V+
Sbjct: 492 DGQYLHNFQRKNGDIPVTNLMAGDRIILSGEERTLFALSRGYVKEINVTSVTC------- 544
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPR 923
L RN S +S L +R+D++E N R +I+D P+
Sbjct: 545 LLDRNVSVLPESTL---FRLDQEEKTCDIDTPLGNLSKLMENTCVSQKLRDLIIDFREPQ 601
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F S SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V
Sbjct: 602 FISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV 661
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTSYT+SAVDN+L+KL I F+R+GR + VH++IQK C S
Sbjct: 662 RILYTCGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGRTQKVHQDIQKFTEEEICRSKP 721
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
I S+ +++ + ++VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +
Sbjct: 722 -IKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSQR 780
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L
Sbjct: 781 FVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKL 839
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDML 1204
Y +L CGSD++ANA + + +L S +PW+ A P PV F+NTD +
Sbjct: 840 TYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKV 899
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVS 1261
PA E + ++N EA LI +T +K + DIGII PY Q +I L S+
Sbjct: 900 PAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIR 959
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE++T+DKYQGRDK ILVSFVRS+++ LL DW R+NVA+TRAK KLI++G
Sbjct: 960 MVEVNTVDKYQGRDKSIILVSFVRSNKD--GPIGELLKDWRRLNVAITRAKHKLILLGCV 1017
Query: 1322 RTLSKVPLLKLLINKVGEQ 1340
+L++ P L L++ + +
Sbjct: 1018 PSLNRYPPLGKLLHHLNSE 1036
Score = 373 (136.4 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 94/283 (33%), Positives = 152/283 (53%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 81 LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 138
Query: 468 SVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++++ +Y
Sbjct: 139 AVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRHLKEMYR 197
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLKK-----LKISEV 576
+N+ ++ + + E +P W F S D + SDG +++
Sbjct: 198 LNLNQEEVKQEVEEYLPSFSKWAGDFMHQYTSSDFPKMQLSLPSDGNNNNSTCNIEVINS 257
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 258 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKELN---SIEHRSQL 313
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
+LYTLL ER ++GLL YL++ V D G I+
Sbjct: 314 VLYTLLSQERRADP-EAGLLLYLKTGNMYPVPANHLDKRGRIV 355
Score = 82 (33.9 bits), Expect = 1.7e-136, Sum P(3) = 1.7e-136
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 431 HLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLI---RTECV 487
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K+ D +++++F R++ P N GD +I
Sbjct: 488 KTICDGQYLHNFQRKNGDIPVTNLMAGDRII 518
Score = 39 (18.8 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLG 714
F+ + QQLPP++ N+E LG
Sbjct: 777 FSQRFVLVGDHQQLPPLVL----NREARALG 803
>ZFIN|ZDB-GENE-090313-71 [details] [associations]
symbol:dna2 "DNA replication helicase 2 homolog
(yeast)" species:7955 "Danio rerio" [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA;ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=ISS]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=ISS] [GO:0005760 "gamma DNA polymerase
complex" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
ZFIN:ZDB-GENE-090313-71 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852 EMBL:BX530068
IPI:IPI00901582 Ensembl:ENSDART00000109798 ArrayExpress:F1Q892
Bgee:F1Q892 Uniprot:F1Q892
Length = 1378
Score = 1262 (449.3 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 360/1036 (34%), Positives = 543/1036 (52%)
Query: 359 PENVNGTSSCH--FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHT 416
PE+V S H + VL+V + + + E + L + W T
Sbjct: 351 PEHVVLASGVHNRYWVLDVQDVTSSRS---CSEKHLTITCSKTSQATETCI-LKDGWEST 406
Query: 417 VIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC 476
++ GD +++ G+ G + R++ FLI+ PD+L+SGT +A+S C RR VL E K
Sbjct: 407 LVTVGDIIHLEGKCVS-GLWTIDRDSAFLILLPDLLISGTSIASSIRCMRRGVLGEMFKA 465
Query: 477 SERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK-N-IESLYACGVNENDIH 533
+ +L GT++H IFQ M + + ++ +A L+ N + +Y+ + + D+
Sbjct: 466 FDGGSKQMLNGTIVHDIFQKAAMSSDFSSEKIQTFATEALRSPNYLGQMYSLKLTQADMR 525
Query: 534 KTLVEAIPKMLNWI--ILFKDSQ-DLNTPTVDFGSDG-LKK------LKISEVTDIEEMA 583
+ + E +P + W L Q T+ SDG L K + +++ DIEE
Sbjct: 526 QEVEEYLPSISEWAKQYLHTSPQAGQKQLTLKLPSDGALSKQDASSSVMVTDFVDIEENI 585
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W P++GLKG ID + VKI + + I+PLE KTGK N S+EHR+QVILYTL+
Sbjct: 586 WCPRFGLKGKIDVTAGVKIHRRGRKPMERIVPLELKTGKESN---SIEHRSQVILYTLMS 642
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKA---STTQQ 696
S R ++G L YL++ V+ D LI RN A N++IK S Q
Sbjct: 643 SARRCDP-EAGFLVYLKTGSLHPVVGNHMDRRELIKIRNSLAHHIGNNLIKVDGKSQMAQ 701
Query: 697 LPPMLRAYGGNKECSGLGN--MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW 754
LP ++ K C N +++ + CS + + E++ + V +
Sbjct: 702 LPAIVSDQQTCKYCPQKRNCAIYNRAVERDPVEKCS--ENPQAFVQSESEHLSQVHLQ-- 757
Query: 755 CSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMP---SPNLNASDGDSLI 811
+F+ L L+A K R N ++ ++ + N+ + G S++
Sbjct: 758 --------YFSHWLLLCSLEALTMENKGGRRNIWLQTAQQREKIGGCAGNMRLAGGVSIL 809
Query: 812 GAAI-----PTKDMDCTLRS---GDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPL 862
+ K+ + TL GD +++S + L +++G +TEI+ V+ S K L
Sbjct: 810 SDGVYKHSFERKEGEQTLTGLIVGDRIVVSDQDSVLIGLSTGYVTEIAVNRVTCSLDKNL 869
Query: 863 RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAP 922
+ SS+ V+R+D+DE S N R +IV+ P
Sbjct: 870 ---SKYSSNT-------VFRLDQDEGAGGLSTHLGNLSMLMENTPTSERLRELIVEFRPP 919
Query: 923 RF-DS-GSVFSQDPA--LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
+F DS SV +D +S I K LN Q++A+ KVL +KDY LI+GMPGTGKT+T+
Sbjct: 920 QFIDSLSSVLPRDAKDIVSNIL--KGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTIC 977
Query: 979 HAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI----QKHCLS 1034
V+ L G S+LLTSYT+SAVDN+L+KLK I F+R+GR + VH EI ++ C
Sbjct: 978 TLVRILHACGFSVLLTSYTHSAVDNILLKLKRFKIGFLRLGRPQKVHHEILPFTEEAC-R 1036
Query: 1035 AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
A I ++EE+++ + +VA TC+G+ +P+ + ++FD CI+DEA Q + PV +GPL +A
Sbjct: 1037 AKGIQTLEELEQLYSRELIVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCIGPLFYA 1096
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
+FVLVGDH QLPP+VQ+ EAR GM+ SLF+RL E H A+ L QYRM IM LSN
Sbjct: 1097 QRFVLVGDHQQLPPIVQNAEARSLGMDESLFKRL-EHHRDAVVQLNVQYRMNSAIMSLSN 1155
Query: 1155 ALIYGDRLSCGSDEIANAKIKVS---------DLSSCSP----WLKEALNPCRPVIFVNT 1201
AL+Y RL CGS++ ANA +++ +L C P W++ AL P PV F++T
Sbjct: 1156 ALMYEGRLECGSEKTANAVLQLPSRAQAEEELELYVCQPQYSAWVQAALEPNSPVCFLDT 1215
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--- 1258
+PA E + ++N EA L+ + L+K DIG+I PY Q +I L
Sbjct: 1216 SEVPAPETVEKSGISNHTEAVLVQGLVTLLLKAGCRACDIGVIAPYRQQLKVISSLLQGD 1275
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+ ++E++T+DKYQGRDK I+VSFVRS N LL DW R+NVA+TRAK KL+M+
Sbjct: 1276 AFKALEVNTVDKYQGRDKSVIIVSFVRS--NAEGNLGELLQDWRRLNVAITRAKHKLLML 1333
Query: 1319 GSCRTLSK-VPLLKLL 1333
GS TL + PL KLL
Sbjct: 1334 GSAPTLRRYAPLEKLL 1349
Score = 46 (21.3 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 47/218 (21%), Positives = 77/218 (35%)
Query: 1 MPQRKKANSSRKLQSSQPQPTKFGIQHFF-DRHTQNSSKN--VDVSSFPQNPNSDLIHSV 57
M K SSR SS + I FF + S K V ++ P + + +
Sbjct: 1 MSTMMKCKSSR---SSMVSGVQSNISSFFLSKVAVKSPKKCEVGITRSPVSLKTGFVKDE 57
Query: 58 SSPNCP-PFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKF 116
+ P P P +V P DS ++ S S +++P L T P + R
Sbjct: 58 NVPCSPNPSAVPETP-DSLRIERPSDTSFEKHSPVSRGL----HTKGVRGKPSLKARKLL 112
Query: 117 SPEMLIKLSQYD-----GGDEVTWNISPV---NERLLAVSKQMPPENIRVL--ANSSRLN 166
P+ L D G + ++ + E + + K ++ ++ SS
Sbjct: 113 QPQKSSSLESEDTFEFKNGISHSGSVKRLLHSTENIQSAKKSRTTQDQKITDCGPSSATA 172
Query: 167 SLTIHQCSHNK--SKQPSPSPKAINRSLTTGRKRVNPC 202
S + + K SK P K + SL R + PC
Sbjct: 173 SQNKYSETLQKAFSKSPEKKIKTESVSLEGSRLKAGPC 210
>UNIPROTKB|E1BMP7 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9913 "Bos taurus" [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
[GO:0043139 "5'-3' DNA helicase activity" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISS] [GO:0004518 "nuclease
activity" evidence=ISS] [GO:0003678 "DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0033567
"DNA replication, Okazaki fragment processing" evidence=ISS]
[GO:0006260 "DNA replication" evidence=ISS] [GO:0000729 "DNA
double-strand break processing" evidence=ISS] [GO:0000076 "DNA
replication checkpoint" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] [GO:0043504 "mitochondrial DNA repair" evidence=IEA]
[GO:0043137 "DNA replication, removal of RNA primer" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 GO:GO:0045740 GO:GO:0000729
GO:GO:0017108 GO:GO:0000076 GO:GO:0043137 EMBL:DAAA02061817
IPI:IPI00688022 NextBio:20878938 GO:GO:0005760 GO:GO:0043139
GO:GO:0043142 GO:GO:0033567 GO:GO:0043504 GO:GO:0006264
PANTHER:PTHR10887:SF14 Uniprot:E1BMP7
Length = 1061
Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
Identities = 348/989 (35%), Positives = 529/989 (53%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + + +LI++PD+L+SGT +A+S C RR+
Sbjct: 83 LRNDWCSVPVEPGDIIHLEGDCISNTWI-IDEDFGYLILYPDMLISGTSIASSIRCMRRA 141
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 142 VLSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEK-LQELASQTIQEIRHLKEMYRL 200
Query: 526 GVNENDIHKTLVEAIPKMLNWI--ILFKD-SQDLNTPTVDFGSDGLKK-----LKISEVT 577
+N+++I + + E +P W + K S D + SDG ++++
Sbjct: 201 KLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIEVTNSL 260
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q++
Sbjct: 261 DIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQLV 316
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---IKASTT 694
LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I ST
Sbjct: 317 LYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRINKSTG 375
Query: 695 QQ-----LPPMLRAYGGNKECSGLGN--MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ 747
++ LP ++ K CS +GN ++ + W ++ + E + ++
Sbjct: 376 EKTELAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKE-ETQHLK 434
Query: 748 VVKNE---IWC---SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVR-QHMPSP 800
+ E +WC + S I L ++E ++S + +R +H+ +
Sbjct: 435 PIHLEYFSLWCLMLTLESQSKDNKRNYQHIWLMPASEMEES---GSCIGSLIRIEHVKT- 490
Query: 801 NLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSF 858
DG L + T L +GD +ILS E L A++ G + EI+ V+ S
Sbjct: 491 ---VCDGQYLHNFQRKNGAIPITNLMAGDRIILSGEERTLFALSRGYVKEINSTTVTCSL 547
Query: 859 SKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVD 918
RN S +S L +R+D++E N R +I+D
Sbjct: 548 D-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGNLSKLMENTRASQKLRDLIID 597
Query: 919 LEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
P+F S SV + + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T
Sbjct: 598 FREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTT 657
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH----- 1031
+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G+ + VH +IQK
Sbjct: 658 ICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPDIQKFTEEEI 717
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
C S +I S+ +++ + +VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL
Sbjct: 718 CRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPL 776
Query: 1092 MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIME 1151
F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM
Sbjct: 777 FFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMS 835
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFV 1199
LSN L Y +L CGSD++ANA I + + S +PWL A P PV F+
Sbjct: 836 LSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSENPWLIAAFEPNNPVCFL 895
Query: 1200 NTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS 1259
NT +PA E + ++N +EA L+ +T +K + DIGII PY Q +I L+
Sbjct: 896 NTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLA 955
Query: 1260 VSSV---EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
SSV E++T+D+YQGRDK ++VSFVRS+E+ LL DW R+NVA+TRAK KLI
Sbjct: 956 QSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNED--GTLGELLKDWRRLNVAITRAKHKLI 1013
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
++G +LS+ P L+ L+N + + I++
Sbjct: 1014 LLGCVPSLSRYPPLRKLLNHLNSEKLIID 1042
>UNIPROTKB|K7DXW3 [details] [associations]
symbol:DNA2 "DNA replication nuclease DNA2" species:9913
"Bos taurus" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:DAAA02061817
PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
Ensembl:ENSBTAT00000003395 Uniprot:K7DXW3
Length = 1137
Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
Identities = 348/989 (35%), Positives = 529/989 (53%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + + +LI++PD+L+SGT +A+S C RR+
Sbjct: 159 LRNDWCSVPVEPGDIIHLEGDCISNTWI-IDEDFGYLILYPDMLISGTSIASSIRCMRRA 217
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 218 VLSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEK-LQELASQTIQEIRHLKEMYRL 276
Query: 526 GVNENDIHKTLVEAIPKMLNWI--ILFKD-SQDLNTPTVDFGSDGLKK-----LKISEVT 577
+N+++I + + E +P W + K S D + SDG ++++
Sbjct: 277 KLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIEVTNSL 336
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q++
Sbjct: 337 DIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQLV 392
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---IKASTT 694
LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I ST
Sbjct: 393 LYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRINKSTG 451
Query: 695 QQ-----LPPMLRAYGGNKECSGLGN--MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ 747
++ LP ++ K CS +GN ++ + W ++ + E + ++
Sbjct: 452 EKTELAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKE-ETQHLK 510
Query: 748 VVKNE---IWC---SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVR-QHMPSP 800
+ E +WC + S I L ++E ++S + +R +H+ +
Sbjct: 511 PIHLEYFSLWCLMLTLESQSKDNKRNYQHIWLMPASEMEES---GSCIGSLIRIEHVKT- 566
Query: 801 NLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSF 858
DG L + T L +GD +ILS E L A++ G + EI+ V+ S
Sbjct: 567 ---VCDGQYLHNFQRKNGAIPITNLMAGDRIILSGEERTLFALSRGYVKEINSTTVTCSL 623
Query: 859 SKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVD 918
RN S +S L +R+D++E N R +I+D
Sbjct: 624 D-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGNLSKLMENTRASQKLRDLIID 673
Query: 919 LEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
P+F S SV + + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T
Sbjct: 674 FREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTT 733
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH----- 1031
+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G+ + VH +IQK
Sbjct: 734 ICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQIQKVHPDIQKFTEEEI 793
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
C S +I S+ +++ + +VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL
Sbjct: 794 CRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPL 852
Query: 1092 MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIME 1151
F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM
Sbjct: 853 FFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMS 911
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFV 1199
LSN L Y +L CGSD++ANA I + + S +PWL A P PV F+
Sbjct: 912 LSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSENPWLIAAFEPNNPVCFL 971
Query: 1200 NTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS 1259
NT +PA E + ++N +EA L+ +T +K + DIGII PY Q +I L+
Sbjct: 972 NTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGIIAPYRQQLKVISDLLA 1031
Query: 1260 VSSV---EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
SSV E++T+D+YQGRDK ++VSFVRS+E+ LL DW R+NVA+TRAK KLI
Sbjct: 1032 QSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNED--GTLGELLKDWRRLNVAITRAKHKLI 1089
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
++G +LS+ P L+ L+N + + I++
Sbjct: 1090 LLGCVPSLSRYPPLRKLLNHLNSEKLIID 1118
>MGI|MGI:2443732 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10090 "Mus musculus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006260 "DNA
replication" evidence=ISO] [GO:0006264 "mitochondrial DNA
replication" evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISO] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0032508 "DNA
duplex unwinding" evidence=ISO] [GO:0033567 "DNA replication,
Okazaki fragment processing" evidence=ISO] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0043137 "DNA
replication, removal of RNA primer" evidence=ISO] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISO] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISO]
[GO:0043504 "mitochondrial DNA repair" evidence=ISO] [GO:0045740
"positive regulation of DNA replication" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
MGI:MGI:2443732 Pfam:PF08696 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0006284 GO:GO:0003677 GO:GO:0051539
GO:GO:0042645 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0005760 GO:GO:0043139 GO:GO:0043142 GO:GO:0043504
GO:GO:0006264 PANTHER:PTHR10887:SF14 CTD:1763 HOGENOM:HOG000168456
HOVERGEN:HBG081456 KO:K10742 EMBL:AK129051 EMBL:AK028381
EMBL:BC025182 EMBL:BC115716 IPI:IPI00224915 IPI:IPI00816966
RefSeq:NP_796346.2 UniGene:Mm.21492 ProteinModelPortal:Q6ZQJ5
SMR:Q6ZQJ5 STRING:Q6ZQJ5 PaxDb:Q6ZQJ5 PRIDE:Q6ZQJ5
Ensembl:ENSMUST00000092462 Ensembl:ENSMUST00000131422 GeneID:327762
KEGG:mmu:327762 UCSC:uc007fji.2 UCSC:uc007fjj.2
GeneTree:ENSGT00550000074852 InParanoid:Q6ZQJ5 OMA:EHESLCH
ChiTaRS:DNA2 NextBio:397947 Bgee:Q6ZQJ5 CleanEx:MM_DNA2
Genevestigator:Q6ZQJ5 GermOnline:ENSMUSG00000036875 Uniprot:Q6ZQJ5
Length = 1062
Score = 1274 (453.5 bits), Expect = 7.3e-130, P = 7.3e-130
Identities = 362/1044 (34%), Positives = 544/1044 (52%)
Query: 359 PENV--NGTSSCHF-LVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWED-WF 414
PE V G + + L +E S+ R A+ K L + Q E + + + W
Sbjct: 36 PETVLSRGVDNRYLVLAVETSQNERGAEE-------KRLHVTASQDREHEVLCILRNGWS 88
Query: 415 HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL 474
+ PGD V++ G+ + + + + I++PD+++SGT VA+S C RR+VL E
Sbjct: 89 SVPVEPGDIVHLEGDCTSEPWI-IDDDFGYFILYPDMMISGTSVASSIRCLRRAVLSETF 147
Query: 475 KCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVNEND 531
+ S+ + L+GT+LH++FQ + + + L+E A L+ ++++ +Y +++++
Sbjct: 148 RGSDPATRQMLIGTILHEVFQKAISESFAPER-LQELALQTLREVRHLKEMYRLNLSQDE 206
Query: 532 IHKTLVEAIPKMLNWIILFK---DSQDLNTPTVDFGSDGLKK-----LKISEVTDIEEMA 583
I + E +P W F S + + SDG + +++ + DIEE
Sbjct: 207 ILCEVEEYLPSFSKWAEDFMRKGPSSEFPQMQLSLPSDGSNRSSPCNIEVVKSLDIEESI 266
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W+P++GLKG ID ++ VKI + ++ ++PLE KTGK N S+EHR+QV+LYTLL
Sbjct: 267 WSPRFGLKGKIDVTVGVKIH-RDCKMKYKVMPLELKTGKESN---SIEHRSQVVLYTLLS 322
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----KASTTQQ--- 696
ER + ++G L YL++ Q V D L+ RN A ++ +A+ ++
Sbjct: 323 QERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNWLAASLLHRVSRAAPGEEARL 381
Query: 697 --LPPMLRAYGGNKECSGLGNM-FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE- 752
LP ++ K CS +GN S S I E + +Q+ +
Sbjct: 382 SALPQIIEEEKTCKYCSQIGNCALYSRAVEEQGDDASIPEAMLSKIQEETRHLQLAHLKY 441
Query: 753 --IWC-----SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNAS 805
+WC S N T SI L ++E ++S V + VR P
Sbjct: 442 FSLWCLMLTLESQSKDNRKTH--QSIWLTPASELEES---GNCVGNLVRTE---PVSRVC 493
Query: 806 DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
DG L M T L +GD +ILS E +L A++ G + ++++ V+ + L
Sbjct: 494 DGQYLHNFQRKNGPMPATNLMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNL- 552
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPR 923
S+ A + V+R+D++E S N R +I+D P+
Sbjct: 553 -----STLPATT----VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQ 603
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F + SV D + K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V
Sbjct: 604 FIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALV 663
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTSYT+SAVDN+L+KL + F+R+G+ VH +IQK C S
Sbjct: 664 RILSACGFSVLLTSYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSR- 722
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
+I S+ +++ + +VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +
Sbjct: 723 SIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRR 782
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR GM SLF+RL E + A+ L QYRM + IM LSN L
Sbjct: 783 FVLVGDHQQLPPLVVNREARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKL 841
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDML 1204
Y +L CGSD +ANA + + +L S SPWL L P PV F+NTD +
Sbjct: 842 TYAGKLECGSDRVANAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKV 901
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVS 1261
PA E ++ ++N EA LI +T +K DIG+I PY Q +I L SV
Sbjct: 902 PAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVG 961
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE++T+DKYQGRDK ILVSFVRS+E+ LL DW R+NVALTRAK KLI++GS
Sbjct: 962 MVEVNTVDKYQGRDKSLILVSFVRSNED--GTLGELLKDWRRLNVALTRAKHKLILLGSV 1019
Query: 1322 RTLSKVPLLKLLINKVGEQSGILN 1345
+L + P L L + + + IL+
Sbjct: 1020 SSLKRFPPLGTLFDHLNAEQLILD 1043
>UNIPROTKB|Q5ZKG3 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0005524
"ATP binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=ISS] [GO:0000076 "DNA replication
checkpoint" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0004518
"nuclease activity" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISS] [GO:0017108 "5'-flap endonuclease
activity" evidence=ISS] [GO:0045740 "positive regulation of DNA
replication" evidence=ISS] [GO:0006264 "mitochondrial DNA
replication" evidence=ISS] [GO:0043137 "DNA replication, removal of
RNA primer" evidence=ISS] [GO:0006284 "base-excision repair"
evidence=ISS] [GO:0016890 "site-specific endodeoxyribonuclease
activity, specific for altered base" evidence=ISS] [GO:0005760
"gamma DNA polymerase complex" evidence=ISS] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0006284 GO:GO:0003677
GO:GO:0051539 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0000729 GO:GO:0017108 GO:GO:0000076 GO:GO:0043137
GO:GO:0043139 GO:GO:0043142 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AJ720121 EMBL:AADN02028013 IPI:IPI00596013
RefSeq:NP_001006497.1 UniGene:Gga.42409 STRING:Q5ZKG3 GeneID:423688
KEGG:gga:423688 CTD:1763 HOGENOM:HOG000168456 HOVERGEN:HBG081456
KO:K10742 NextBio:20826122 Uniprot:Q5ZKG3
Length = 992
Score = 1053 (375.7 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 298/869 (34%), Positives = 457/869 (52%)
Query: 386 DAKSPYKVLRLLNEQS-GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+ + P K L + ++ S G+ L W + PGD V++ G+ G + ++ +
Sbjct: 28 EGRDPEKHLAVSSDPSLGDTELCVLQNGWESVPVVPGDIVHLEGDCSS-GTWVINEQSGY 86
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPT 503
LI++PD+L+SGT +++S C R++VL ER + SE S L+GT+LH+IFQ + +
Sbjct: 87 LILYPDLLLSGTTISSSIRCMRKAVLSERFRGSECGSRQTLVGTILHEIFQQSVTNNLSP 146
Query: 504 MKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF------KDSQD 555
K +EE A+ ++ QK ++ +Y + + +I + + E +P W F ++
Sbjct: 147 EK-VEELAKKIVYGQKYLKEMYHLKLKQTEIMQEIEEYLPSFFKWTEDFVRNPANQNKMQ 205
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
L P+ + D ++I ++ DIEE W+P++GLKG ID + RVKI ++ I I+P
Sbjct: 206 LKLPSENKTGDCSSTVEIVDILDIEENIWSPRFGLKGKIDVTARVKIH-RQGGIQSRIMP 264
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
LE K+GK N S+EHR+QVILYTLL ER + ++G L YL++ V R D
Sbjct: 265 LELKSGKESN---SVEHRSQVILYTLLNLERRVDP-EAGFLLYLKTGTMYPVTGTRMDRR 320
Query: 676 GLIMRRNEFA----NDIIKASTTQQ------LPPMLRAYGGNKECSGLGNMF-DSHIYHL 724
LI RN+ A + K++ +Q LPP++ K CS + N F S
Sbjct: 321 ELIKLRNQVAFYLMHSTYKSAVGRQQSQLAALPPLIDDSQACKYCSQIHNCFLYSRAVEE 380
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDA-SNEHQKSY 783
A SF LI + KE Q +K S +F+ + L+ S + +K Y
Sbjct: 381 RMASVSFP---PALIPIIEKETQHLKP-------SHLEYFSLWYLMLTLEMQSGDSKKGY 430
Query: 784 RDNRFVYHFVRQHMPS--PNL-------NASDGDSLIG-----AAIPTKDMDCTLRSGDY 829
++ + R+ N+ S+G L A+P L GD
Sbjct: 431 KNIWMIPSLEREKAGDCVGNMIRVDQVQEVSEGQYLHSFQRKNGAVP----GANLLVGDR 486
Query: 830 VILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEI 888
V++S E + L +A+G + EIS +S L GRN S +S +R+D +E
Sbjct: 487 VVVSGEENGLLGLATGYVREISATKISC-------LLGRNLSKLPEST---TFRLDHEEG 536
Query: 889 MTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLN 946
S V N R +I+D PRF SV + + K LN
Sbjct: 537 DCSIGVPFENLSKLMKDSPVSEKLRNLIIDFHKPRFIQHLSSVLPPEAKEAVASILKGLN 596
Query: 947 DDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLI 1006
Q++A+ +VL ++DY LI+GMPGTGKT+T+ V+ L G S+LLTS+T++AVDN+L+
Sbjct: 597 KPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNILL 656
Query: 1007 KLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGI 1061
KL + F+R+GR + VH +I+K C S +I SV ++++ + VVA C+GI
Sbjct: 657 KLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSK-SIKSVTDLEELYNSQPVVATACMGI 715
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+P+ K+FD CI+DEA Q + P+ LGPL + +FVLVGDH QLPPLVQ++EAR+ GM
Sbjct: 716 NHPIFVQKQFDFCIVDEASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQNSEARDLGMS 775
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS- 1180
SLF+RL E++ A+ L QYRM IM LSN L+Y +L CGS++++NA + +L
Sbjct: 776 ESLFKRL-EQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNLKM 834
Query: 1181 -------SCSPWLKEALNPCRPVIFVNTD 1202
+ WLKE L P +PV F+NT+
Sbjct: 835 LKLEFADASKTWLKEVLEPDKPVCFLNTE 863
Score = 237 (88.5 bits), Expect = 2.3e-129, Sum P(2) = 2.3e-129
Identities = 55/109 (50%), Positives = 72/109 (66%)
Query: 1240 DIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII+PY Q +I L + VE++TIDKYQGRDK I+VSFVR+S N N +
Sbjct: 871 DIGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIIIVSFVRNS-NDENL-GA 928
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLIMVG +L + P L+ L+ + ++ I N
Sbjct: 929 LLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSEAMIFN 977
>UNIPROTKB|Q4S102 [details] [associations]
symbol:GSTENG00025786001 "Chromosome 5 SCAF14773, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0006264 "mitochondrial DNA replication" evidence=ISS]
[GO:0006284 "base-excision repair" evidence=ISS] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=ISS] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISS] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=ISS] [GO:0045740 "positive regulation of DNA replication"
evidence=ISS] [GO:0005760 "gamma DNA polymerase complex"
evidence=ISS] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0006284 GO:GO:0016890 eggNOG:COG1112 GO:GO:0045740
GO:GO:0017108 GO:GO:0043137 GO:GO:0043142 GO:GO:0006264
PANTHER:PTHR10887:SF14 HOVERGEN:HBG081456 EMBL:CAAE01014773
ProteinModelPortal:Q4S102 STRING:Q4S102 Uniprot:Q4S102
Length = 1043
Score = 851 (304.6 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 188/404 (46%), Positives = 261/404 (64%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q++A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+
Sbjct: 633 LNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNI 692
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN---INSVEEIKKRLDQVKVVAVTCLGI 1061
L+KLK + F+R+G+ + VH +I + + ++++ E+++ ++ VV TCLGI
Sbjct: 693 LLKLKRFRVGFLRLGQGQKVHPDILPYTEESARKKGVHTLSELEQLYNKELVVGTTCLGI 752
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+PL T ++FD CI+DEA Q + PV +GPL +A +FVLVGDH QLPP+VQ+ EAR GM+
Sbjct: 753 RHPLFTRRRFDFCIVDEASQISQPVCVGPLFYARRFVLVGDHQQLPPIVQNQEARSLGMD 812
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
SLF+RL E H A+ L QYRM + IM LSN+L+Y RL CGS+ A + I + L S
Sbjct: 813 ESLFKRL-ELHRDAVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATSLITLPLLPS 871
Query: 1182 CSP------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE 1235
P W++ L P PV F++ +PA E + ++N EA LI K+ L+K
Sbjct: 872 VLPELGSLAWIQATLLPSNPVCFLDCSAVPALETVEQGGISNHTEAALIHKLLLLLIKAG 931
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSS--ENP 1290
+ DIG+I PY Q I L S+ VE++T+D+YQGRDK IL+SFVRS+ E P
Sbjct: 932 CKPGDIGVIAPYRQQLRTISGLLQASAFTGVEVNTVDRYQGRDKSLILLSFVRSTAEEGP 991
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLL 1333
LL DW R+NVA+TRAK KL+M+GS TL + P+ KLL
Sbjct: 992 ---LGELLKDWRRLNVAITRAKSKLLMLGSATTLRRYAPVEKLL 1032
Score = 375 (137.1 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 99/294 (33%), Positives = 155/294 (52%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L + W T + GD V++ G+ D V RE FL++ PD L+SGT +++S C RR+
Sbjct: 40 LRDGWEMTPVCRGDVVHLEGQRDGASWL-VDREKGFLVLQPDSLISGTSISSSIRCMRRA 98
Query: 469 VLDERLKCSERSISALL-GTLLHQIFQ-AGLMKEIP--TMKFLEEYARLVLQKNIESLYA 524
VL E K + S +L GT++H +FQ A K+ T+ L + A L + + +Y
Sbjct: 99 VLGEMFKSFDGSSKQMLNGTMVHDVFQKAATAKDFSSVTLSRLADQA-LHSPQYLPDMYR 157
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS-----DGLKKLKISEVTDI 579
GV++ ++ + L + +P + +W + + + D L I+E+ DI
Sbjct: 158 LGVSQEEMKQELHDYMPSLEHWAKEYLSPSSPKAVRLSIRAPGQCQDAAALLTITELVDI 217
Query: 580 EEMAWAPKYGLKGMIDASIRVKIESKRN-EINGM----ILPLEFKTGKIPNGQSSMEHRA 634
EE W+P++GLKG ID + RV+I RN + +G +PLE KTG+ N S+EHR+
Sbjct: 218 EENVWSPRFGLKGKIDVTARVRIHRPRNGQHHGSQEERTIPLELKTGRESN---SIEHRS 274
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
QVILYTL+ ERY D+G L YL++ V+ D L+ RN + +
Sbjct: 275 QVILYTLMSLERYSP--DAGFLLYLKTGNLHPVVASHMDRRELLKLRNTLVHHL 326
Score = 94 (38.1 bits), Expect = 5.0e-129, Sum P(3) = 5.0e-129
Identities = 47/220 (21%), Positives = 81/220 (36%)
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSI 771
G++ HLT H + HW L LEA M+ ++ IW C+ ++
Sbjct: 381 GDLLQQETGHLTPPHLRYFSHWVLLCCLEAATMETKNSQKNIWLQSPEESEKNGSCVGNL 440
Query: 772 VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVI 831
+ Q + F++ F R P P + G I D + G +V
Sbjct: 441 AISGPVTAQA---EGAFLHRFQRSR-PEPRAGSHSSGLASGDRIVVGDQE-----GRFVG 491
Query: 832 LST----ESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRI-DKD 886
L+T E +R +V+ L ++S+F + F RL G + + L + R+ +
Sbjct: 492 LATGHLREVNRTSVSCTLDRDLSKFP-GLLF----RLDGHEGAVGLSTHLTNLSRLMESS 546
Query: 887 EIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS 926
+ ++ R ++VDL P F S
Sbjct: 547 QGRSTCPFSALLSVFLDNVGRVSDRLRELVVDLRPPEFIS 586
Score = 41 (19.5 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 12/45 (26%), Positives = 20/45 (44%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAH 728
+A + QQLPP+++ N+E LG D ++ H
Sbjct: 784 YARRFVLVGDHQQLPPIVQ----NQEARSLG--MDESLFKRLELH 822
>RGD|1306791 [details] [associations]
symbol:Dna2 "DNA replication helicase 2 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0000076 "DNA replication
checkpoint" evidence=ISO;ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003678 "DNA helicase activity"
evidence=ISO;ISS] [GO:0004518 "nuclease activity" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=ISO;ISS]
[GO:0006264 "mitochondrial DNA replication" evidence=IEA;ISO]
[GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0016890
"site-specific endodeoxyribonuclease activity, specific for altered
base" evidence=IEA;ISO] [GO:0017108 "5'-flap endonuclease activity"
evidence=ISO;ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0033567 "DNA replication, Okazaki fragment processing"
evidence=ISO;ISS] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA;ISO] [GO:0043137 "DNA replication, removal of RNA
primer" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO;ISS] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO;ISS] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA;ISO] [GO:0045740 "positive regulation of DNA
replication" evidence=IEA;ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
RGD:1306791 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006284
GO:GO:0003677 GO:GO:0051539 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043137 GO:GO:0005760 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 IPI:IPI00368049
ProteinModelPortal:D3ZG52 Ensembl:ENSRNOT00000000438
UCSC:RGD:1306791 OrthoDB:EOG4CZBF7 Uniprot:D3ZG52
Length = 1059
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 349/1002 (34%), Positives = 526/1002 (52%)
Query: 392 KVLRLLNEQSGEERAVHLWED-WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
K L + Q GE+ + + + W + PGD +++ G+ + V + + I+ PD
Sbjct: 65 KHLLITVSQEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWI-VDDDFGYFILSPD 123
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEE 509
+L+SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + + K L+E
Sbjct: 124 MLISGTSVASSIRCLRRAVLSETFRVSDTATRQMLIGTILHEVFQKAISESFAPEK-LQE 182
Query: 510 YARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWI--ILFKDSQ------DLNTP 559
A L+ ++++ +Y ++++++ + E +P W + K ++ L+ P
Sbjct: 183 LALQTLREVRHLKEMYRLNLSQDEVRCEVEEYLPSFSKWADEFMHKGTKAEFPQMHLSLP 242
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
+ +++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE K
Sbjct: 243 SDSSDRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKTKYKIMPLELK 301
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N S+EHR QVILYTLL ER + ++G L YL++ Q V D L+
Sbjct: 302 TGKESN---SIEHRGQVILYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLK 357
Query: 680 RRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGN--MFDSHIYHL-TTA 727
RN+ A ++ +A+ ++ LP ++ K CS +GN ++ + + T+
Sbjct: 358 LRNQLAFSLLHRVSRAAAGEEARLLALPQIIEEEKTCKYCSQMGNCALYSRAVEQVHDTS 417
Query: 728 HCSFLRHWDRLIDLEAKEMQVVKNEIWC---SRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
+R + + +WC + S SI L +++ ++S
Sbjct: 418 IPEGMRSKIQEGTQHLTRAHLKYFSLWCLMLTLESQSKDTKKSHQSIWLTPASKLEES-- 475
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVA 842
+ VR P DG L M T L +GD +ILS E +L A++
Sbjct: 476 -GNCIGSLVRTE---PVKRVCDGHYLHNFQRKNGPMPATNLMAGDRIILSGEERKLFALS 531
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXX 902
G + I V+ L RN S+ ++ L +R+D++E + N
Sbjct: 532 KGYVKRIDTAAVTC-------LLDRNLSTLPETTL---FRLDREEKHGDINTPLGNLSKL 581
Query: 903 XXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
R +I+D + P+F + SV D + K LN QR+A+ KVL +K
Sbjct: 582 MENTDSSKRLRELIIDFKEPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKKVLLSK 641
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
DY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G+
Sbjct: 642 DYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQ 701
Query: 1021 HEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
VH +IQK M +I S+ +++ + VVA TC+GI++P+ + K FD CI+
Sbjct: 702 SHKVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMFSRKTFDFCIV 761
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E + A+
Sbjct: 762 DEASQISQPICLGPLFFSRRFVLVGDHKQLPPLVLNREARALGMSESLFKRL-ERNESAV 820
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----------SCSPWL 1186
L QYRM + IM LSN L Y +L CGSD +ANA I + +L S +PWL
Sbjct: 821 VQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFYADYSDNPWL 880
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P PV F+NTD +PA E ++ ++N EA LI +T +K DIGII P
Sbjct: 881 AGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAP 940
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y Q I L SV VE++T+DKYQGRDK ILVSFVRS+E+ LL DW R
Sbjct: 941 YRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNED--GTLGELLKDWRR 998
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+NVA+TRAK KLI++GS +L + P L+ L + + + I N
Sbjct: 999 LNVAITRAKHKLILLGSVSSLKRFPPLEKLFDHLNAEQLISN 1040
>DICTYBASE|DDB_G0274777 [details] [associations]
symbol:DDB_G0274777 "DNA replication helicase"
species:44689 "Dictyostelium discoideum" [GO:0006261 "DNA-dependent
DNA replication" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR014808
dictyBase:DDB_G0274777 Pfam:PF08696 GO:GO:0005634 GO:GO:0006261
EMBL:AAFI02000012 GO:GO:0004003 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 KO:K10742 RefSeq:XP_643888.1
ProteinModelPortal:Q86IV6 EnsemblProtists:DDB0233088 GeneID:8619314
KEGG:ddi:DDB_G0274777 InParanoid:Q86IV6 Uniprot:Q86IV6
Length = 1838
Score = 673 (242.0 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 158/420 (37%), Positives = 239/420 (56%)
Query: 863 RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAP 922
+L G N+ + L WR+D DE ++ S+++ N R +IVDLEAP
Sbjct: 1242 QLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQKL--RSLIVDLEAP 1299
Query: 923 RFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
FD + ++ + LN DQR AIIK L+AKDY+LI GMPGTGKT+ ++ +
Sbjct: 1300 IFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIH 1359
Query: 983 ALLMRGASILLTSYTNSAVDNLLIKLKSQ--SIDFVRIGRH-EVVHKEIQKHCLSAMNIN 1039
L G +L+TS+T++++D+LL+K Q +I+ +R+ + + + L +
Sbjct: 1360 ILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFG 1419
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
++ + K+ L++ ++VA +CLGI + L +FD CI+DEA + P+S+GP++ FVL
Sbjct: 1420 NITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVL 1479
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGDH+QLPP+V + EA + G++ISLF++LS HP ++S L QYRMC IM LSN LIY
Sbjct: 1480 VGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYN 1539
Query: 1160 DRLSCGSDEIANAKIKVS-----------DL-SSCSPWLKEALNPCRPVIFVNTDMLP-A 1206
+RL CG+ I+N ++ + DL + W + NP VIFVNTD L +
Sbjct: 1540 NRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNS 1599
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELV-KNEIEGKDIGIITPYNSQANLIRHS-LSVSSVE 1264
E+ + N EA ++A +T L+ K I IGIITP Q N I+ S L S+E
Sbjct: 1600 TESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSILKYLSIE 1659
Score = 319 (117.4 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 76/232 (32%), Positives = 127/232 (54%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
K L +E GE R + L ++W +T + PGD VNVIGEFDD G+ + N LI+HPD+
Sbjct: 625 KTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDI 684
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC--SERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L++GT + S +C RRSVL E+++ S S + G+++H+IFQ L + +
Sbjct: 685 LITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINT 744
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVDFGS-DG 567
+ + ++ K S + G++ + +T A+ + NW+ + K ++ P+ S
Sbjct: 745 FKQEIIGK---STFQLGLSS--LGETQDTALNHLENWLPTIDKFAKTFILPSSSSSSASS 799
Query: 568 LKK-----------LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
LKK L IS++ +IEE W+ YGLKG ID+S+ +K+ ++ +
Sbjct: 800 LKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKLVKQQQD 851
Score = 210 (79.0 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 1248 NSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
N+Q N + + +++I TIDK+QG+DKDCI++SFVRS+E L+ DW R+NVA
Sbjct: 1736 NNQNNNQNYLKKIENLDILTIDKFQGKDKDCIIISFVRSNEKKE--IGELIKDWKRMNVA 1793
Query: 1308 LTRAKKKLIMVGSCRTLSKVP 1328
TRAKKKLI VGS +LSK P
Sbjct: 1794 FTRAKKKLIFVGSKSSLSKFP 1814
Score = 136 (52.9 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 29/76 (38%), Positives = 48/76 (63%)
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
+P E KTGK P + H +QV++YTLLM++RY + I+ G+LYYL+S + + V +
Sbjct: 906 VPFEIKTGK-PYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGL 964
Query: 674 LVGLIMRRNEFANDII 689
L ++ RN+ + I+
Sbjct: 965 LHPILFERNQIRSLIV 980
Score = 110 (43.8 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 31/108 (28%), Positives = 54/108 (50%)
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFT 765
G++ S LG++F HL++ H ++L++W+++I LE + IW G
Sbjct: 1032 GDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNKSRKFGEKNN 1091
Query: 766 GCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNAS--DGDSLI 811
C+ ++L S E+ + F Y F R + P LN+S +GD L+
Sbjct: 1092 SCIGELIL-ISEEYSEI--TETFSYRF-RVN-PDKLLNSSISEGDYLL 1134
Score = 96 (38.9 bits), Expect = 5.7e-128, Sum P(6) = 5.7e-128
Identities = 64/248 (25%), Positives = 107/248 (43%)
Query: 6 KANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQ-N----PNSD--LIHSVS 58
K S++ S PT FD+ + S N+ SSF + N P D L ++
Sbjct: 270 KEKQSQQSILSYLNPTPSLPTPIFDKPIERSDSNLATSSFSKLNFDDIPLDDEELSQKIN 329
Query: 59 SPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDE---TNSTHHSP------- 108
+P+ P + +N S P++K SP +L +TPP+ I D + ++S+ SP
Sbjct: 330 TPS--PKLILKNTFSSTPTQK-SP--SLSSTPPNKIKITDKKLPNSSSSSSSPPPSSAKS 384
Query: 109 EISKRFKFSP--EMLIKLSQYDGG--DEVTWNISPVNERLLAVSKQMPPENIRVLANSSR 164
++S R + SP ++ L+Q D++ +N + + L ++ + P NI+ +NS
Sbjct: 385 KLSHRSQSSPLSPLITNLNQNKSNEFDDINFNFN-IPSPLKEINNK--P-NIK--SNSKE 438
Query: 165 -LNSLTIHQCSHNKSKQPSPSPKAINRSLTTGRKRVNPCEXXXXXXXXXXXXYSVSSQQS 223
L LT Q H+ S P P I S + P + +S S S
Sbjct: 439 TLTPLT--QIFHSSS----PPPSIIIESSPSVCFSPTPTKNQSPTLSNLSPTFSFLSDTS 492
Query: 224 PFRTPPSL 231
P ++P L
Sbjct: 493 PVKSPSQL 500
Score = 60 (26.2 bits), Expect = 9.3e-123, Sum P(6) = 9.3e-123
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 816 PTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLP 865
P K ++ ++ GDY+++S E + SG ++ I ++++ + L P
Sbjct: 1119 PDKLLNSSISEGDYLLISVEDKYYGMGSGQLSNIINDIITITCREKLSEP 1168
Score = 55 (24.4 bits), Expect = 1.1e-123, Sum P(6) = 1.1e-123
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 4 RKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCP 63
+K NSS S P K + H +Q+S + +++ QN +++ + N P
Sbjct: 365 KKLPNSSSSSSSPPPSSAKSKLSH----RSQSSPLSPLITNLNQNKSNEFDDINFNFNIP 420
Query: 64 -PFSVYRN-PSDSAPSKKN-SPQSAL--ENTPPDNILPIDDETNSTHHSPEISK 112
P N P+ + SK+ +P + + ++PP +I I + + S SP +K
Sbjct: 421 SPLKEINNKPNIKSNSKETLTPLTQIFHSSSPPPSI--IIESSPSVCFSPTPTK 472
Score = 52 (23.4 bits), Expect = 2.2e-123, Sum P(6) = 2.2e-123
Identities = 24/93 (25%), Positives = 44/93 (47%)
Query: 29 FDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAP-SKKNSPQSALE 87
F + +++S D+ S P+S L S SS S P+ S P SKKN S+
Sbjct: 88 FKVNNRDTSIGSDIYSKTITPSS-LALSTSSLIS---STLTPPTQSPPFSKKNEKTSSFL 143
Query: 88 NTPPDNILPIDDETNSTHHSPEISKRFKFSPEM 120
N+P ++N+++ ++S ++ S ++
Sbjct: 144 NSPSSQ----KSKSNNSNVKEKLSPQYSSSSQL 172
>POMBASE|SPBC16D10.04c [details] [associations]
symbol:dna2 "DNA replication endonuclease-helicase
Dna2" species:4896 "Schizosaccharomyces pombe" [GO:0000084 "S phase
of mitotic cell cycle" evidence=IC] [GO:0000723 "telomere
maintenance" evidence=IGI] [GO:0000784 "nuclear chromosome,
telomeric region" evidence=ISO] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISO] [GO:0004518 "nuclease activity"
evidence=IMP] [GO:0004527 "exonuclease activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IC;IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006281 "DNA repair" evidence=ISS] [GO:0017108
"5'-flap endonuclease activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0031573 "intra-S DNA damage
checkpoint" evidence=IMP] [GO:0031860 "telomeric 3' overhang
formation" evidence=IMP] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IMP] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IC] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0071932 "replication fork reversal" evidence=IMP]
InterPro:IPR026851 PomBase:SPBC16D10.04c InterPro:IPR014808
Pfam:PF08696 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0051539
GO:GO:0043596 GO:GO:0004003 GO:GO:0004527 GO:GO:0000084
eggNOG:COG1112 GO:GO:0000784 GO:GO:0042162 GO:GO:0031573
GO:GO:0017108 GO:GO:0043137 GO:GO:0031860 GO:GO:0043142
PANTHER:PTHR10887:SF14 EMBL:AF144384 EMBL:AB028014 EMBL:AF075169
PIR:T39568 PIR:T47242 PIR:T51292 RefSeq:NP_596499.2 STRING:Q9URU2
GeneID:2540148 OrthoDB:EOG47H8Z4 NextBio:20801284 GO:GO:0071932
InterPro:IPR022765 Pfam:PF01930 Uniprot:Q9URU2
Length = 1397
Score = 1211 (431.4 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 327/993 (32%), Positives = 512/993 (51%)
Query: 391 YKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
++ L+L+ E + + L DW T I GD++ V FD V + +I+HP
Sbjct: 377 FRQLKLILEANDILHQLFLRGDWTETSIFVGDSIRVEATFDKDNTAIVDNDKGLIIIHPK 436
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEE 509
+L+S T VA+SF C R++V+ +R+ A++ G +LH FQ L + I ++ ++
Sbjct: 437 ILMSATAVASSFPCLRKAVISDRVGIYGPPTKAMVTGNILHDFFQHALYRGIDALENVDI 496
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
++ I +Y ++ ++I + L +P +L I+ + L + D ++ +
Sbjct: 497 NLETSIKTYISDIYFADLSLDEIREELDARLP-LLKSIV----ERYLISKKNDNNNESIH 551
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
IS + DIEE W+P++GLKG IDA++ V + K + + LPLE KTG+ + +
Sbjct: 552 ---ISRLLDIEESIWSPRFGLKGNIDATVEVVLTEKPESSSTLTLPLELKTGRYVD---N 605
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
+ H AQ +LYTLL+S+RY + + LL YL++ + ++ S L GLIM RN A
Sbjct: 606 ISHFAQSLLYTLLISDRYGINTNQALLCYLENSTIKNLVASNSQLRGLIMTRNSLAQHNF 665
Query: 690 KASTTQQLP--PMLRAYGGNKEC--------------SGLGNMFDSHIYHLTTAHCSFLR 733
+ S + + + EC +GL ++ + + F +
Sbjct: 666 RRSLPEMISNRKICDHCSLVSECLFFQKMSDKGVANSNGLTESWNEWMREVKDEDLEFYK 725
Query: 734 HWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFV 793
W++L++ E + + + + ++ + L + + + D F Y F
Sbjct: 726 KWEKLLNQEERLLLLKRGDVLTFDTEELEAYGKTLYPLYITKEDIVCLEIDDRVFHYKFA 785
Query: 794 RQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFH 853
LN D+ P + G+ V +S E ++A G I I
Sbjct: 786 F-------LN----DN----GYPRNFLHSGFSVGERVFISDEHGHWSLAKGHIVHIQDSC 830
Query: 854 VSVSFSKPLRLPG---------RNS---SSDADSLL------HEVWRIDKDEIMTSFSVM 895
+ V L +P +N + DS L H +RIDKDE + + +
Sbjct: 831 IEVRTRHRLHIPWLKMPNFDFKKNQVFFGNYEDSKLSFIGSNHTRYRIDKDEFSSGIASI 890
Query: 896 RYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
R R MI+ L+ P+F + ++ DP ++ K LN+DQ A+ K
Sbjct: 891 R-GTLMSSVLPDAPLIIRDMIIRLKPPKFCNSALI--DP--EFL---KCLNEDQITALKK 942
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
A+ Y+LILGMPGTGKT+T+ +++LL + ILLTS+T+ AVDN+LIKLK
Sbjct: 943 CHAAEHYSLILGMPGTGKTTTISSLIRSLLAKKKKILLTSFTHLAVDNILIKLKGCDSTI 1002
Query: 1016 VRIGRHEVVHKEIQKHCLS-AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVC 1074
VR+G +H +++ CL+ + + +K + ++VA + LG+ + + +KFD C
Sbjct: 1003 VRLGSPHKIHPLVKEFCLTEGTTFDDLASLKHFYEDPQIVACSSLGVYHSIFNKRKFDYC 1062
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q LP+ LGPL A KFVLVGDHYQLPPLV+++ ++G+ +SLF+ LSE+HP+
Sbjct: 1063 IIDEASQIPLPICLGPLQLAEKFVLVGDHYQLPPLVKNSRTSKDGLSLSLFKLLSEKHPE 1122
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI---K------VSDLSSCSPW 1185
A++ L+ QYRM + I LS+ LIYG L CGS I+ K+ K + D SS W
Sbjct: 1123 AVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDSSSSLHW 1182
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ + +NP VIF NTD + E+K + L N EA LI + ++ ++ IGII+
Sbjct: 1183 VNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQSSIGIIS 1242
Query: 1246 PYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
Y SQ L+ +L S + +EI+T+D+YQGRDKD IL+SFVRS N +N LL DWHR+
Sbjct: 1243 IYKSQVELLSKNLKSFTEIEINTVDRYQGRDKDIILISFVRS--NSKNLVGELLRDWHRL 1300
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVP----LLKLL 1333
NVAL+RAK K IM GS TLS LLKLL
Sbjct: 1301 NVALSRAKVKCIMFGSLSTLSSSNIVSHLLKLL 1333
Score = 37 (18.1 bits), Expect = 6.4e-125, Sum P(2) = 6.4e-125
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 348 NSVVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPY 391
N ++NG EN +S ++SEK + P+ K+ +
Sbjct: 37 NYLLNGRTKLKLENFAYNASTEISSPKISEKKHSSLPIKRKNTF 80
>UNIPROTKB|F1NWZ8 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9031 "Gallus gallus" [GO:0000076
"DNA replication checkpoint" evidence=IEA] [GO:0000729 "DNA
double-strand break processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005760 "gamma DNA polymerase complex"
evidence=IEA] [GO:0006264 "mitochondrial DNA replication"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0016890 "site-specific endodeoxyribonuclease activity, specific
for altered base" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0043504 "mitochondrial DNA repair"
evidence=IEA] [GO:0045740 "positive regulation of DNA replication"
evidence=IEA] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0005634 GO:GO:0006284 GO:GO:0042645 GO:GO:0016890
GO:GO:0045740 GO:GO:0017108 GO:GO:0043137 GO:GO:0005760
GO:GO:0043142 GO:GO:0043504 GO:GO:0006264 PANTHER:PTHR10887:SF14
EMBL:AADN02028013 GeneTree:ENSGT00550000074852 OMA:EHESLCH
IPI:IPI00584167 Ensembl:ENSGALT00000006429 ArrayExpress:F1NWZ8
Uniprot:F1NWZ8
Length = 1009
Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
Identities = 340/964 (35%), Positives = 514/964 (53%)
Query: 386 DAKSPYKVLRLLNEQS-GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+ + P K L + ++ S G+ L W + PGD V++ G+ G + ++ +
Sbjct: 76 EGRDPEKHLAVSSDPSLGDTELCVLQNGWESVPVVPGDIVHLEGDCSS-GTWVINEQSGY 134
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPT 503
LI++PD+L+SGT +++S C R++VL ER + SE S L+GT+LH+IFQ + +
Sbjct: 135 LILYPDLLLSGTTISSSIRCMRKAVLSERFRGSECGSRQTLVGTILHEIFQQSVTNNLSP 194
Query: 504 MKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF------KDSQD 555
K +EE A+ ++ QK ++ +Y + + +I + + E +P W F ++
Sbjct: 195 EK-VEELAKKIVYGQKYLKEMYHLKLKQTEIMQEIEEYLPSFFKWTEDFVRNPANQNKMQ 253
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
L P+ + D ++I ++ DIEE W+P++GLKG ID + RVKI ++ I I+P
Sbjct: 254 LKLPSENKTGDCSSTVEIVDILDIEENIWSPRFGLKGKIDVTARVKIH-RQGGIQSRIMP 312
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
LE K+GK N S+EHR+QVILYTLL ER + ++G L YL++ V R D
Sbjct: 313 LELKSGKESN---SVEHRSQVILYTLLNLERRVDP-EAGFLLYLKTGTMYPVTGTRMDRR 368
Query: 676 GLIMRRNEFA----NDIIKASTTQQ------LPPMLRAYGGNKECSGLGNMF-DSHIYHL 724
LI RN+ A + K++ +Q LPP++ K CS + N F S
Sbjct: 369 ELIKLRNQVAFYLMHSTYKSAVGRQQSQLAALPPLIDDSQACKYCSQIHNCFLYSRAVEE 428
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDA-SNEHQKSY 783
A SF LI + KE Q +K S +F+ + L+ S + +K Y
Sbjct: 429 RMASVSFP---PALIPIIEKETQHLKP-------SHLEYFSLWYLMLTLEMQSGDSKKGY 478
Query: 784 RDNRFVYHFVRQHMPS--PNL-------NASDGDSLIG-----AAIPTKDMDCTLRSGDY 829
++ + R+ N+ S+G L A+P L GD
Sbjct: 479 KNIWMIPSLEREKAGDCVGNMIRVDQVQEVSEGQYLHSFQRKNGAVP----GANLLVGDR 534
Query: 830 VILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEI 888
V++S E + L +A+G + EIS +S L GRN S +S +R+D +E
Sbjct: 535 VVVSGEENGLLGLATGYVREISATKISC-------LLGRNLSKLPEST---TFRLDHEEG 584
Query: 889 MTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDP--ALSYIWSEKS 944
S V N R +I+D PRF SV + A++ I + S
Sbjct: 585 DCSIGVPFENLSKLMKDSPVSEKLRNLIIDFHKPRFIQHLSSVLPPEAKEAVASIL-KGS 643
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q++A+ +VL ++DY LI+GMPGTGKT+T+ V+ L G S+LLTS+T++AVDN+
Sbjct: 644 LNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNI 703
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L+KL + F+R+GR + VH +I+K C S +I SV ++++ + VVA C+
Sbjct: 704 LLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSK-SIKSVTDLEELYNSQPVVATACM 762
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
GI +P+ K+FD CI+DEA Q + P+ LGPL + +FVLVGDH QLPPLVQ++EAR+ G
Sbjct: 763 GINHPIFVQKQFDFCIVDEASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQNSEARDLG 822
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
M SLF+RL E++ A+ L QYRM IM LSN L+Y +L CGS++++NA + +L
Sbjct: 823 MSESLFKRL-EQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSNATANLPNL 881
Query: 1180 S--------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
+ WLKE L P +PV F+NT+ +PA E + + N EA L+ +T
Sbjct: 882 KMLKLEFADASKTWLKEVLEPDKPVCFLNTEKVPAPEHTEKGGVCNVTEAKLVFFLTTLF 941
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+K DIGII+PY Q +I L + VE++TIDKYQGRDK I+VSFVR+S
Sbjct: 942 IKAGCRPSDIGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIIIVSFVRNS- 1000
Query: 1289 NPRN 1292
N N
Sbjct: 1001 NDEN 1004
>CGD|CAL0002159 [details] [associations]
symbol:DNA2 species:5476 "Candida albicans" [GO:0000784
"nuclear chromosome, telomeric region" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA] [GO:0000733 "DNA strand renaturation"
evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
processing" evidence=IEA] [GO:0001302 "replicative cell aging"
evidence=IEA] [GO:0043137 "DNA replication, removal of RNA primer"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IEA]
[GO:0017108 "5'-flap endonuclease activity" evidence=IEA]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] InterPro:IPR026851 InterPro:IPR014808
CGD:CAL0002159 Pfam:PF08696 eggNOG:COG1112 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
InterPro:IPR022765 Pfam:PF01930 EMBL:AACQ01000161 EMBL:AACQ01000157
RefSeq:XP_712310.1 RefSeq:XP_712454.1 ProteinModelPortal:Q59RL2
STRING:Q59RL2 GeneID:3645932 GeneID:3646072 KEGG:cal:CaO19.1192
KEGG:cal:CaO19.8783 Uniprot:Q59RL2
Length = 1426
Score = 896 (320.5 bits), Expect = 2.9e-117, Sum P(4) = 2.9e-117
Identities = 236/670 (35%), Positives = 358/670 (53%)
Query: 706 GNKECSGLGN-MFDSHIYHL--TTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGN 762
G KE SG+ ++++ + ++ + +HWD LI E M E+W
Sbjct: 721 GTKEESGIEEELYEAITRDIFENDSYRKYFQHWDELISKEEDVMGRAVKELWTIPAED-Q 779
Query: 763 HFTG-CLSSIVLDASNE------------HQKSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
F G C S + + SNE H KS +D +FVY F + PS N +
Sbjct: 780 EFQGKCFSGMTITNSNETESNNFLFSSTHHDKS-QDQQFVYTFAKAENPS-RFNLAKSQV 837
Query: 810 LIGAAIPTKDMD--CTLRSG-------DYVILSTESDRLAVASGLITEISRFHVSVSFSK 860
I + D + L +G D+V++ST ++ + + ++ + V F
Sbjct: 838 TINDKVIISDEEGHFALTTGYVKQITKDFVVVSTRR-KIITSDYKLKNYNKANNQV-FQS 895
Query: 861 PLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLE 920
+R +N + +RIDKD + + RYN R+++VDLE
Sbjct: 896 VIRSTQQNIRTTTKKR----FRIDKDRMFYGLGLARYNVLSLFLPNGASQL-RKLVVDLE 950
Query: 921 APRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P F + S D ++ N DQ A+ KV +A DY+LI+GMPGTGKT+ +
Sbjct: 951 KPTFTASSWEIPDA--------ETFNPDQIAALKKVFSADDYSLIVGMPGTGKTTVIAQL 1002
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-IN 1039
+K L+ + S+LLTSYTNSAVDN+L+KLK I+F+RIG + VHK+I+ + + I
Sbjct: 1003 IKVLVAQRKSVLLTSYTNSAVDNILLKLKDLDIEFLRIGYPQRVHKDIKDYIPEFKDSIT 1062
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
+ E+ + KV+A TCL IT+ + FD CI+DEA Q TLPVSLGPL FA KFV
Sbjct: 1063 TYEQYVNTYMRPKVIATTCLSITDVCFNLRYSFDYCIVDEASQITLPVSLGPLRFAKKFV 1122
Query: 1099 LVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALI 1157
+VGDH QL PLV + R + + SLF L++EHP ++S L QYRM IM + N LI
Sbjct: 1123 MVGDHDQLQPLVTHPDKRVKQELSRSLFSLLAKEHPDSVSHLTYQYRMNSDIMNVCNTLI 1182
Query: 1158 YGDRLSCGSDEIANAKIKV-----------SDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
Y ++L CGS+++A +K+ D+S S W+ + + V+F++ D +PA
Sbjct: 1183 YNNKLKCGSEQVAQNSLKIPHPEVLNSFIGEDVSPDSQWIHKIFDEKNNVLFLDYDAVPA 1242
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEI 1265
E + + N EA LI +I LV ++ +IG+++ Y +Q ++++ +L+ + +EI
Sbjct: 1243 VEENVGEMVINTKEALLIQQIVNALVHGGVKEDEIGVMSFYRAQLSVLKKNLNNLKDLEI 1302
Query: 1266 HTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
T D+YQGRDK+CI++S VRS+E R L+ ++ R+NVA TRAK KLI++GS TLS
Sbjct: 1303 LTADQYQGRDKECIIISLVRSNE--RKFAGDLMKEYRRLNVATTRAKTKLIILGSRFTLS 1360
Query: 1326 KVPLLKLLIN 1335
L K I+
Sbjct: 1361 TNELTKTFID 1370
Score = 316 (116.3 bits), Expect = 2.9e-117, Sum P(4) = 2.9e-117
Identities = 93/313 (29%), Positives = 162/313 (51%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
+L ++N + + V E + + GD ++VI D V +N LI +PD++
Sbjct: 398 ILEVVNSSRDKSKLVVRGE-YCELELEKGDVIHVIIT-DSARPTLVDDMHNLLIWNPDIM 455
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSERS-ISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
+S T ++ +C R++V+ R K S I ++G ++H IFQ + E M+F+ +
Sbjct: 456 LSATTISQQLNCSRKTVILSRYKFPGTSTIPIIVGEIVHFIFQECICTERWDMEFMSQVL 515
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT-VDFGSDGLKK 570
+L + + +++ G D+ +V+ + W + Q L+ +D S+ +
Sbjct: 516 DQLLSQYMLAIFGIGKELKDVRDEVVKHFDYLETWFKTYY-KQPLSKKNLIDETSEKEQI 574
Query: 571 L-KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
+ + E DIEE +P +G+KG IDA+I K E+K+ + MI P+E KTGK
Sbjct: 575 MFAVEEALDIEEEIGSPIFGIKGKIDATITAKFENKKLKGQYMI-PMEIKTGK-----EY 628
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
+ H AQ LY+LL +RY K+IDS LL Y + T+ ++ S+L L+ RN +N I
Sbjct: 629 IYHHAQASLYSLLFKDRYDKNIDSYLLVYTKEKVTKKCNIRISELRSLVNLRNRVSN-YI 687
Query: 690 KASTTQQLPPMLR 702
K + +LPP+++
Sbjct: 688 KDNL--KLPPLVK 698
Score = 52 (23.4 bits), Expect = 7.1e-117, Sum P(3) = 7.1e-117
Identities = 17/64 (26%), Positives = 28/64 (43%)
Query: 35 NSSKNVDVSSFPQNPNSD------LIHSVSSPNCP-PFSVYRNPSDSAPSKKNSPQSALE 87
N+ N + S ++P SD L+HS + P CP P V + + P +N+
Sbjct: 252 NTPPNPNTSIQSEDPFSDDDDLIQLLHSKTLPECPQPQPVSNDNTSIKPPMENASDDGES 311
Query: 88 NTPP 91
+ P
Sbjct: 312 SDDP 315
Score = 51 (23.0 bits), Expect = 2.9e-117, Sum P(4) = 2.9e-117
Identities = 19/94 (20%), Positives = 42/94 (44%)
Query: 64 PFSVYRNPSDSAPSKKNSPQSALE-NTPPDNILPIDD-ETNSTHHSPEISKRFKFSPEML 121
P + NP + + + SP ++ N+ + P+ + N+T + ++ K+ + +
Sbjct: 35 PVNNLTNPQTNQSNIQKSPIRPIDINSITTKVNPVQEINRNNTDNLTKVQKQSELN---F 91
Query: 122 IKLSQYDGGDEVTWNISPVNERLLAVSKQMPPEN 155
++ + D D + W SP + KQM +N
Sbjct: 92 LQENSDDSFDGIRWKESP---EIKGSHKQMEIKN 122
Score = 45 (20.9 bits), Expect = 3.9e-116, Sum P(3) = 3.9e-116
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 334 KSQDKNGAGMLLEANSVVNGVPTDPPENVNGTS 366
+S + G+ +E + G+P+ P +N+N S
Sbjct: 107 ESPEIKGSHKQMEIKNSFGGLPSSPLKNINPES 139
Score = 41 (19.5 bits), Expect = 2.9e-117, Sum P(4) = 2.9e-117
Identities = 10/49 (20%), Positives = 22/49 (44%)
Query: 348 NSVVNGVPTDP-----PENVNGTSSCHFLVLEVSEKNRPADPVDAKSPY 391
N+ +N TDP P ++ T H + +++ P + ++ P+
Sbjct: 219 NNWINKFETDPQDDQNPNSLPDTVETHKTIPKINTPPNPNTSIQSEDPF 267
Score = 37 (18.1 bits), Expect = 2.0e-21, Sum P(4) = 2.0e-21
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 1100 VGDHYQLPPLVQST 1113
+ D+ +LPPLV+++
Sbjct: 687 IKDNLKLPPLVKNS 700
>SGD|S000001207 [details] [associations]
symbol:DNA2 "Tripartite DNA replication factor" species:4932
"Saccharomyces cerevisiae" [GO:0001302 "replicative cell aging"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000784
"nuclear chromosome, telomeric region" evidence=IDA] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0006261 "DNA-dependent DNA
replication" evidence=IMP;IDA] [GO:0006273 "lagging strand
elongation" evidence=IGI;IMP] [GO:0006281 "DNA repair"
evidence=IEA;IGI;IMP] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA;IDA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
[GO:0000706 "meiotic DNA double-strand break processing"
evidence=IGI] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR026851
SGD:S000001207 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0003677 EMBL:BK006934
GO:GO:0001302 GO:GO:0051539 GO:GO:0004003 eggNOG:COG1112
GO:GO:0000784 EMBL:U00027 GO:GO:0000723 GO:GO:0000706 GO:GO:0000733
GO:GO:0017108 GO:GO:0000014 GO:GO:0043139 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OrthoDB:EOG47H8Z4 PIR:S48904
RefSeq:NP_012034.1 ProteinModelPortal:P38859 SMR:P38859
DIP:DIP-2324N IntAct:P38859 MINT:MINT-620090 STRING:P38859
EnsemblFungi:YHR164C GeneID:856569 KEGG:sce:YHR164C CYGD:YHR164c
HOGENOM:HOG000112234 OMA:GLARYNI NextBio:982411
Genevestigator:P38859 GermOnline:YHR164C GO:GO:0035861
GO:GO:0006273 Uniprot:P38859
Length = 1522
Score = 852 (305.0 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 179/448 (39%), Positives = 283/448 (63%)
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F + DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAN---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ +I +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 SVS---SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ + +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
Score = 298 (110.0 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 99/340 (29%), Positives = 173/340 (50%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGREN 442
K+L ++ + GE+ +V + W + GD +++I G+ DD+ +
Sbjct: 439 KILECIDGK-GEQSSVVVRHPWVYLEFEVGDVIHIIEGKNIENKRLLSDDKNPKTQLAND 497
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC--SERSISALLGTLLHQIFQAGLMKE 500
N L+++PDVL S T V +S C RRS+L + + E S+ LG ++H++ Q + +
Sbjct: 498 NLLVLNPDVLFSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYK 557
Query: 501 IPTMKFLEEYARLVLQKNIESL---YACGV---NENDIH-KTLV--EAIPKMLNWIILFK 551
+ K E +++QK ++SL Y+ + NE + K LV E +L ++ F
Sbjct: 558 LSHNKISME---IIIQK-LDSLLETYSFSIIICNEEIQYVKELVMKEHAENILYFVNKFV 613
Query: 552 DSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING 611
+ T G+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I
Sbjct: 614 SKSNYGCYTSISGTRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI-- 671
Query: 612 MILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQS-DQTQGVMVQ 670
+PLE KTGK S+ + Q ++YTLL+++RY I+ LLY+ + + T+ V
Sbjct: 672 --VPLEVKTGK----SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVL 725
Query: 671 RSDLVGLIMRRNEFA-------NDII-KASTTQQLPPMLR 702
S + ++M RN + ++ +A + +LPP+LR
Sbjct: 726 HS-IKHILMSRNRMSMNFKHQLQEVFGQAQSRFELPPLLR 764
Score = 86 (35.3 bits), Expect = 1.5e-112, Sum P(3) = 1.5e-112
Identities = 49/204 (24%), Positives = 85/204 (41%)
Query: 706 GNKECSGL--GN--MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGG 761
G E SGL G + +H+ + F ++ LI E + V E++ GS
Sbjct: 787 GTPEESGLVEGEFEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTR 846
Query: 762 NHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGA----AIP 816
+G CLS +V+ EH+K+ + ++Y F R+ + N + S S I A I
Sbjct: 847 ESRSGRCLSGLVVSEVVEHEKT--EGAYIYCFSRRR--NDNNSQSMLSSQIAANDFVIIS 902
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITE--ISRFHVSVSFSKPLRLPGRNSSSDAD 874
++ L G ++ ++V L+ + + + + SS A
Sbjct: 903 DEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSSLIAT 962
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYN 898
L +RIDK++I S S+ R+N
Sbjct: 963 QNL-VTYRIDKNDIQQSLSLARFN 985
>UNIPROTKB|F1PYQ4 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:AAEX03002775 EMBL:AAEX03002776
EMBL:AAEX03002777 Ensembl:ENSCAFT00000036654 Uniprot:F1PYQ4
Length = 997
Score = 727 (261.0 bits), Expect = 5.3e-110, Sum P(3) = 5.3e-110
Identities = 201/505 (39%), Positives = 276/505 (54%)
Query: 806 DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
DG L D+ T L +GD +ILS E L A++ G + EI+ V+
Sbjct: 465 DGQYLHNFQRKNGDIPVTNLMAGDRIILSGEERTLFALSRGYVKEINVTSVTC------- 517
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPR 923
L RN S +S L +R+D++E N R +I+D P+
Sbjct: 518 LLDRNVSVLPESTL---FRLDQEEKTCDIDTPLGNLSKLMENTCVSQKLRDLIIDFREPQ 574
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F S SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V
Sbjct: 575 FISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV 634
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTSYT+SAVDN+L+KL I F+R+GR + VH++IQK C S
Sbjct: 635 RILYTCGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGRTQKVHQDIQKFTEEEICRSKP 694
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
I S+ +++ + ++VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +
Sbjct: 695 -IKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSQR 753
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L
Sbjct: 754 FVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKL 812
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDML 1204
Y +L CGSD++ANA + + +L S +PW+ A P PV F+NTD
Sbjct: 813 TYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKA 872
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVE 1264
P + +IA Q+L II +L+ HS S+ VE
Sbjct: 873 GC----------KPSDIGIIAPYRQQLK----------IIN------DLLFHS-SIRMVE 905
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSEN 1289
++T+DKYQGRDK ILVSFVRS+++
Sbjct: 906 VNTVDKYQGRDKSIILVSFVRSNKD 930
Score = 369 (135.0 bits), Expect = 5.3e-110, Sum P(3) = 5.3e-110
Identities = 92/277 (33%), Positives = 149/277 (53%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 52 LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 109
Query: 468 SVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++++ +Y
Sbjct: 110 AVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRHLKEMYR 168
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLKK-----LKISEV 576
+N+ ++ + + E +P W F S D + SDG +++
Sbjct: 169 LNLNQEEVKQEVEEYLPSFSKWAGDFMHQYTSSDFPKMQLSLPSDGNNNNSTCNIEVINS 228
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 229 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKELN---SIEHRSQL 284
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
+LYTLL ER ++GLL YL++ V D
Sbjct: 285 VLYTLLSQERRADP-EAGLLLYLKTGNMYPVPANHLD 320
Score = 237 (88.5 bits), Expect = 1.7e-52, Sum P(3) = 1.7e-52
Identities = 58/133 (43%), Positives = 81/133 (60%)
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQ 1272
NNPV C + T K + DIGII PY Q +I L S+ VE++T+DKYQ
Sbjct: 861 NNPV--CFLN--TD---KAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQ 913
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
GRDK ILVSFVRS+++ LL DW R+NVA+TRAK KLI++G +L++ P L
Sbjct: 914 GRDKSIILVSFVRSNKD--GPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGK 971
Query: 1333 LINKVGEQSGILN 1345
L++ + + I++
Sbjct: 972 LLHHLNSEKKIMD 984
Score = 82 (33.9 bits), Expect = 5.3e-110, Sum P(3) = 5.3e-110
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 404 HLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLI---RTECV 460
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K+ D +++++F R++ P N GD +I
Sbjct: 461 KTICDGQYLHNFQRKNGDIPVTNLMAGDRII 491
Score = 39 (18.8 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 684 FANDIIKASTTQQLPPMLRAYGGNKECSGLG 714
F+ + QQLPP++ N+E LG
Sbjct: 750 FSQRFVLVGDHQQLPPLVL----NREARALG 776
>UNIPROTKB|G4MK85 [details] [associations]
symbol:MGG_02491 "DNA replication ATP-dependent helicase
dna2" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696
GO:GO:0004386 EMBL:CM001231 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742 InterPro:IPR022765
Pfam:PF01930 RefSeq:XP_003709288.1 ProteinModelPortal:G4MK85
EnsemblFungi:MGG_02491T0 GeneID:2681588 KEGG:mgr:MGG_02491
Uniprot:G4MK85
Length = 1689
Score = 831 (297.6 bits), Expect = 5.5e-104, Sum P(3) = 5.5e-104
Identities = 190/488 (38%), Positives = 280/488 (57%)
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFT 765
G+ E SG+ FD + HLT H F W+ L+ E KE Q ++ E+W +
Sbjct: 905 GDGETSGMQGKFDEVVQHLTPTHKEFFLKWEDLLTKEEKESQKLRRELWTMLSTEREKVG 964
Query: 766 GCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD-- 821
C S++VL+ + E + S + NRF Y F++ + S N + + +G I D +
Sbjct: 965 RCFSNVVLEEGSAVEDKNSPKINRFQYTFLKDDVTS-NFSFMESQLAVGEPIVVSDENGH 1023
Query: 822 CTLRSGDYVILSTESDRLAVASGL---------ITEIS-RFHVSVSFSKPLRLPGRNSSS 871
L G V ++ +AV L E++ + S+ P R+ +
Sbjct: 1024 FALALGFVVAVTKRRITVAVDRRLHNARIRQPGFDEVNNQVFASIMEVGPDRVGTQPPLG 1083
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXX-XXXXXXRRMIVDLEAPRFDSGSVF 930
+ + +R+DKDE + +R N RR++VDLE P F +
Sbjct: 1084 TKEPRIR--YRLDKDEFSNGMATVRNNLVQVMANGPSGSLDLRRLVVDLEPPTFKT---- 1137
Query: 931 SQDPALSYIWSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
A Y S+ +SLN DQ++A+ KV++AKDYAL+LGMPGTGKT+T+ H ++AL+ +G
Sbjct: 1138 ---VATQYEISDGESLNVDQKKAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALIRQGK 1194
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
S+LLTSYT+SAVDN+L+KLK SI +R+G VH E+Q+ L+A +NS EEI+
Sbjct: 1195 SVLLTSYTHSAVDNILLKLKGDSIPVLRLGAPAKVHPEVQEFATLAAQPMNSFEEIRTAW 1254
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPP 1108
+ VVA TCLGI++PL ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPP
Sbjct: 1255 HDLPVVATTCLGISHPLFNERTFDYCIVDEASQITLPICLGPIRMARTFVLVGDHNQLPP 1314
Query: 1109 LVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDE 1168
LVQ+ EAR+ G+++SLF+ LS+ HP ++ L+ QYRMC+ +M LSN LIY L CG++E
Sbjct: 1315 LVQNEEARKGGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCGTEE 1374
Query: 1169 IANAKIKV 1176
+ K+ +
Sbjct: 1375 LRLRKLDI 1382
Score = 624 (224.7 bits), Expect = 5.4e-82, Sum P(2) = 5.4e-82
Identities = 162/497 (32%), Positives = 258/497 (51%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L L+ + + VHL DW T ++ V++IG+F+ G+C + N LI+HP
Sbjct: 575 PEKILLLVEDTTKANVTVHLRGDWIETPVSTKAFVHIIGDFEHSGRCIIDNSQNMLILHP 634
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SFSC RR+VL +R+K SE S + GT+LH+IFQ LM + +FL
Sbjct: 635 DQLISSTVVADSFSCTRRAVLQDRVKATSEASPPLVYGTMLHEIFQEALMANKWSSEFLT 694
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
+ ++IE LY V+ + + L+ + +M +W F S + + G +G
Sbjct: 695 ALVDKNIGRHIEDLYTIKVSLGEAREHLLSKMREMRSWAEAFV-SNFPKSDAIVHGRNGE 753
Query: 569 K-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
K + +S++ D+EE W+P YGLKG IDA+++V ++ N N + +P E KTGK N
Sbjct: 754 KANMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMKDGNNRRN-LTVPFEVKTGKNVNSN 812
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
H+AQ LY LL+S+RY I G+LYY+++ QT + R +L ++M+RN A
Sbjct: 813 ----HQAQTALYNLLLSDRYDIEIAYGILYYMETSQTIRIPAVRHELRHMVMQRNTLACY 868
Query: 688 IIKASTTQQLPPMLRA-------YG-------------GNKECSGLGNMFDSHIYHLTTA 727
I + S QLPPM +A Y G+ E SG+ FD + HLT
Sbjct: 869 IRERSV--QLPPMKKAKNACGRCYAQTSCFIYHKLADDGDGETSGMQGKFDEVVQHLTPT 926
Query: 728 HCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRD 785
H F W+ L+ E KE Q ++ E+W + C S++VL+ + E + S +
Sbjct: 927 HKEFFLKWEDLLTKEEKESQKLRRELWTMLSTEREKVGRCFSNVVLEEGSAVEDKNSPKI 986
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGL 845
NRF Y F++ + S N + M+ L G+ +++S E+ A+A G
Sbjct: 987 NRFQYTFLKDDVTS-NFSF---------------MESQLAVGEPIVVSDENGHFALALGF 1030
Query: 846 ITEISRFHVSVSFSKPL 862
+ +++ ++V+ + L
Sbjct: 1031 VVAVTKRRITVAVDRRL 1047
Score = 294 (108.6 bits), Expect = 5.5e-104, Sum P(3) = 5.5e-104
Identities = 68/158 (43%), Positives = 100/158 (63%)
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLP--AYEAKDHQTLNNPVEACLIAKITQELVKN 1234
+D +SC WL+ ++P V FVNTD LP EAK ++ +N PVEA L+ ++ + L+
Sbjct: 1416 TDGNSC--WLRHLVDPDTRVAFVNTDALPDSREEAKGNRIVN-PVEAQLVVQLVESLMTL 1472
Query: 1235 EIEGKDIGIITPYNSQANLIRHSL-------SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ +IG++T Y SQ L++H L ++VE+HT D++QGRDK+ +++S VRS+
Sbjct: 1473 GVPANEIGVMTHYRSQLALLKHKLLRGKNTGDATAVEMHTADRFQGRDKEVVVLSLVRSN 1532
Query: 1288 ENPRNC-TSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
E C LL DW RINVA TRAK KL+++GS TL
Sbjct: 1533 EA---CHIGDLLRDWRRINVAFTRAKTKLLVIGSRETL 1567
Score = 43 (20.2 bits), Expect = 1.6e-18, Sum P(3) = 1.6e-18
Identities = 18/66 (27%), Positives = 32/66 (48%)
Query: 971 TGKTSTMVHAVKALLMRGASILLTS-YTNSAVDNLLIKLK-SQSIDFVRIGRHEVVHKEI 1028
TGK H + L ++LL+ Y +L ++ SQ+I + RHE+ H +
Sbjct: 805 TGKNVNSNHQAQTALY---NLLLSDRYDIEIAYGILYYMETSQTIRIPAV-RHELRHMVM 860
Query: 1029 QKHCLS 1034
Q++ L+
Sbjct: 861 QRNTLA 866
Score = 37 (18.1 bits), Expect = 5.5e-104, Sum P(3) = 5.5e-104
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 460 ASFSCPRRSVLDERLKCSERS-ISALLGTLLHQIFQAGLMKEIPTM 504
+S P + R S+ S +SALL T+ +I ++ ++ TM
Sbjct: 286 SSIESPTSKLKSGRRPDSKLSMVSALLETVTGEIEKSNASQDYETM 331
Score = 37 (18.1 bits), Expect = 6.4e-18, Sum P(3) = 6.4e-18
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
NS+ A + L+ + D+ +I ++ ++ Y
Sbjct: 810 NSNHQAQTALYNLLLSDRYDIEIAYGILYY 839
>UNIPROTKB|F6QXW0 [details] [associations]
symbol:dna2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0000076 "DNA replication checkpoint" evidence=ISS]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS]
[GO:0017108 "5'-flap endonuclease activity" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=ISS] [GO:0043139
"5'-3' DNA helicase activity" evidence=ISS] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0000729 GO:GO:0017108 GO:GO:0000076
GO:GO:0043139 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 OMA:EHESLCH EMBL:AAMC01051984
EMBL:AAMC01051985 EMBL:AAMC01051986 Ensembl:ENSXETT00000016310
Uniprot:F6QXW0
Length = 1048
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 318/1000 (31%), Positives = 490/1000 (49%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
V A+ K L + Q G++ + L +DW I PGD +++ G + R+
Sbjct: 62 VYAQGEEKHLTITASQEGDDLELCILKDDWVALHIKPGDIIHLEGNCAFDNTWTISRDTG 121
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIP 502
+LI++PD+L+SGT +A C RRSVL E+ K C + S L+GT+LH IFQ +
Sbjct: 122 YLILYPDLLISGTSIANGIRCLRRSVLSEKFKVCDKGSRQMLIGTMLHDIFQRATTRGF- 180
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
T L+E A + K ++ +Y +N+ D+ + E +P W I F + LN
Sbjct: 181 TDSVLQELAHHTVHGPKYLKEMYQLKLNQTDVMGEVQEYLPSFAKWAIDFM-THPLNQHQ 239
Query: 561 VDF----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPL 616
++ D + K+SE DIEE W+P++GLKG ID + RVKI K ++ + I+PL
Sbjct: 240 INVTRPTAGDPTEATKVSEFLDIEENIWSPRFGLKGKIDVTARVKIHQK-SKSHLKIMPL 298
Query: 617 EFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVG 676
E KTGK N S+EHR+QV+LYTLL ER + ++GLL YL++ V R D
Sbjct: 299 ELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGLLLYLKTGNMYSVPGNRLDRRE 354
Query: 677 LIMRRNE---FANDIIKAS-------TTQQLPPMLRAYGGNKECSGLGNM-FDSHIYHLT 725
L+ RNE + +++ S T LP ++ K CS + N S
Sbjct: 355 LLKIRNELSYYLTNVVHKSDNGSKEITLASLPALIADRQACKFCSQMRNCALYSRSVEQQ 414
Query: 726 TAHCSFLRHWDRLIDLEAKEMQ---VVKNEIW---CS-RGSGGNHFTGCLSSIVLDASNE 778
+C ++ E + + + +W C+ G+ + G +I + +S+E
Sbjct: 415 IENCYIPAEMIPVVQKETEHLNKDHLQYFRLWYLMCTLEGNSKDSKMG-RKNIWMMSSSE 473
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESD 837
++ D + + + +R P SDG L + + T L SGD V++S E
Sbjct: 474 REE---DGQCIGNLIRT---GPVQTISDGQHLHSFQRKSGTVPATNLMSGDRVVVSGEDK 527
Query: 838 RLAVASGLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
LA++SG I E+ +++ + L +LP + LL +R+D +E
Sbjct: 528 FLALSSGYIKEVKHNNITCILDRSLGKLP--------EDLL---FRLDHEEGGGGLESHL 576
Query: 897 YNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAII 954
N R++I+D P F SV D K LN Q++A+
Sbjct: 577 GNLSRLMENSPVSDKLRKLIIDFSKPNFVQHLSSVLPSDAKDIVANILKGLNKPQKQAMK 636
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA-SILLTSYTNSAVDNLLIKLKSQSI 1013
+VL +KDY LI+GMPGTGKT+T+ V L ++ S L+ + +A + + ++
Sbjct: 637 RVLLSKDYTLIVGMPGTGKTTTICTLVSTLHLKTCTSCLVDDHREAAGTHRSHRHSKGTV 696
Query: 1014 DFVRIGR-HEVVH--KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+ + R H V C S +V K+L ++ + C+ + +
Sbjct: 697 NLGKQKRQHRVTSTTSSTSAKCRSKTE-PAVSAENKKLQKLISGSHVCIMVNGHKTFSQN 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ-LPPLVQSTE-ARENGMEISLFRRL 1128
+ D L + PL + F L+ H+Q V+S RE GM SLF+RL
Sbjct: 756 NYIIFFDNI----LLLKKLPLHYMCAFALI--HHQCFKGCVKSVSLVRELGMSESLFKRL 809
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC------ 1182
E + +A+ L QYRM IM LSN L+Y RL C SD ++NA +K+ + +
Sbjct: 810 -ERNQEAVVQLTVQYRMNSQIMALSNKLVYEGRLECASDRVSNAVVKLPHIKTLLLELEF 868
Query: 1183 -----SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S W+K+ L P PV F+NT+ +PA E ++ ++N +EA L+ +T+ +K
Sbjct: 869 RESQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFCLTKLFLKAGCR 928
Query: 1238 GKDIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q +I + SLS S+VE++T+DKYQGRDK I+VSFVRS+ + +
Sbjct: 929 PSDIGIIAPYRQQLKVISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGK--L 986
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LL DW R+NVALTRAK KLIM+G TLS+ L+ LI
Sbjct: 987 GDLLKDWRRLNVALTRAKHKLIMLGCVPTLSRFLCLEQLI 1026
>UNIPROTKB|J9NRI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014001 PROSITE:PS51192 GO:GO:0017108 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 GeneTree:ENSGT00550000074852
EMBL:AAEX03002775 EMBL:AAEX03002776 EMBL:AAEX03002777
Ensembl:ENSCAFT00000046272 Uniprot:J9NRI6
Length = 640
Score = 926 (331.0 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 232/564 (41%), Positives = 323/564 (57%)
Query: 806 DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
DG L D+ T L +GD +ILS E L A++ G + EI+ V+
Sbjct: 72 DGQYLHNFQRKNGDIPVTNLMAGDRIILSGEERTLFALSRGYVKEINVTSVTC------- 124
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPR 923
L RN S +S L +R+D++E N R +I+D P+
Sbjct: 125 LLDRNVSVLPESTL---FRLDQEEKTCDIDTPLGNLSKLMENTCVSQKLRDLIIDFREPQ 181
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F S SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V
Sbjct: 182 FISYLSSVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLV 241
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTSYT+SAVDN+L+KL I F+R+GR + VH++IQK C S
Sbjct: 242 RILYTCGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGRTQKVHQDIQKFTEEEICRSKP 301
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
I S+ +++ + ++VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +
Sbjct: 302 -IKSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSQR 360
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L
Sbjct: 361 FVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKL 419
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDML 1204
Y +L CGSD++ANA + + +L S +PW+ A P PV F+NTD +
Sbjct: 420 TYDGKLECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKV 479
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVS 1261
PA E + ++N EA LI +T +K + DIGII PY Q +I L S+
Sbjct: 480 PAPEQVEKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIR 539
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE++T+DKYQGRDK ILVSFVRS+++ LL DW R+NVA+TRAK KLI++G
Sbjct: 540 MVEVNTVDKYQGRDKSIILVSFVRSNKD--GPIGELLKDWRRLNVAITRAKHKLILLGCV 597
Query: 1322 RTLSKVPLLKLLINKVGEQSGILN 1345
+L++ P L L++ + + I++
Sbjct: 598 PSLNRYPPLGKLLHHLNSEKLIMD 621
Score = 82 (33.9 bits), Expect = 2.9e-99, Sum P(2) = 2.9e-99
Identities = 22/91 (24%), Positives = 40/91 (43%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 11 HLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGSCIGNLI---RTECV 67
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K+ D +++++F R++ P N GD +I
Sbjct: 68 KTICDGQYLHNFQRKNGDIPVTNLMAGDRII 98
>FB|FBgn0030170 [details] [associations]
symbol:CG2990 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=ISS] [GO:0033567 "DNA replication, Okazaki
fragment processing" evidence=IEA] [GO:0017108 "5'-flap
endonuclease activity" evidence=IEA] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 EMBL:AE014298 GO:GO:0006200
GO:GO:0017108 GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
KO:K10742 GeneTree:ENSGT00550000074852 OMA:EHESLCH
FlyBase:FBgn0030170 EMBL:BT088860 RefSeq:NP_727386.1
UniGene:Dm.17561 SMR:Q8IRL9 STRING:Q8IRL9
EnsemblMetazoa:FBtr0071415 GeneID:31934 KEGG:dme:Dmel_CG2990
UCSC:CG2990-RB InParanoid:Q8IRL9 GenomeRNAi:31934 NextBio:776017
Uniprot:Q8IRL9
Length = 1100
Score = 544 (196.6 bits), Expect = 2.8e-93, Sum P(3) = 2.8e-93
Identities = 154/456 (33%), Positives = 239/456 (52%)
Query: 814 AIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
A P++D+ + G+YV++S+ S RLAVA+G I I + + + L R S
Sbjct: 518 ADPSRDLSLSGFDLGEYVVISSTS-RLAVAAGFIVSIEARRLDLRLERDLSQ--RYSE-- 572
Query: 873 ADSLLHEVWRIDKDEIMTSFSVMRY-NXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFS 931
E + IDK + SF+ + N R +IV + P + V
Sbjct: 573 ------ETFIIDKHDSQ-SFATFNFTNLGMLLSEGERFQELRDIIVAKKPP--EQHKVLP 623
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ +LN Q+ A ++ LT + LI G+PGTGKT T+V V+ L + G S+
Sbjct: 624 KIILTKGAPILLNLNKVQQNAALRALTTSSHLLIKGLPGTGKTQTLVALVRLLHLLGKSV 683
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD 1049
L+T+ T+SAVDNL+++L + +R+G +HK++++ + + +VEE++K L
Sbjct: 684 LITAQTHSAVDNLIMRLLPFGLPMMRLGSGSRIHKQLEEISEERLTKDCKTVEELEKALG 743
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
Q +V VTCLG +PL ++FD CI+DEA Q P L PL+ SKFVLVGD QLPP+
Sbjct: 744 QPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQVLQPTVLRPLIHCSKFVLVGDPEQLPPI 803
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V+S EAR+ G + +LF+RL E A+ +LQ YRM + I L+N L YG L C SDE+
Sbjct: 804 VRSKEARQRGADETLFQRLDSEKATAVLSLQ--YRMNKTITRLANELTYGGDLKCASDEV 861
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT-DMLPAYEAKDHQTLNNPVEACLIAK 1226
+ A+ +V L+ W++ AL + V +NT D L + + + V+ C +
Sbjct: 862 SGARFEVELLNEAPRWVQRALTTHLEQAVTLINTGDCLERCQEFVYAS-QRLVDTCSSIE 920
Query: 1227 ITQELVKNEIEG----KDIGIITPYNSQANLIRHSL 1258
+ K+EI K + T Y +A ++ H L
Sbjct: 921 QSFSEDKDEIRKLTSKKRVSKYTNY-CEAGIVMHLL 955
Score = 350 (128.3 bits), Expect = 2.8e-93, Sum P(3) = 2.8e-93
Identities = 88/269 (32%), Positives = 151/269 (56%)
Query: 421 GDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER 479
GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL ER + +
Sbjct: 119 GDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQERFRGLDS 178
Query: 480 SISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN--IESLYACGVNENDIHKTL 536
S + +GTL+H++ Q L +++ K ++ + +L + LYA + + ++ L
Sbjct: 179 GNSVMVIGTLVHELLQKVLRQKLFDKKHIQSALQEMLASSSLAHLLYASNLIQVEMEDHL 238
Query: 537 VEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDA 596
++ I +++++ + + P+V + + +I E+ DIEE W P+ GLKG +D
Sbjct: 239 MKFIDPIVSFVAQYVKGEP---PSVLLPE--VYRGQIHEICDIEENLWVPQLGLKGKVDV 293
Query: 597 SIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLL 656
S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+ S + + SGLL
Sbjct: 294 SVKVKNQRQREEI----IPLELKTGR---ASFSMEHKGQLLLYQLMHSAQG-RDTQSGLL 345
Query: 657 YYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
YL+ + V R++ L+M RN+ A
Sbjct: 346 LYLKEGLLREVASGRNEQRDLLMLRNDLA 374
Score = 175 (66.7 bits), Expect = 2.8e-93, Sum P(3) = 2.8e-93
Identities = 41/130 (31%), Positives = 74/130 (56%)
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGR 1274
N EA ++ + + L+K+ E IG+I PY +Q L + S + +E +T+D++QGR
Sbjct: 944 NYCEAGIVMHLLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGR 1003
Query: 1275 DKDCILVSFVRS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
DK+ I+ S ++ S+ R+ + +L D R+ VA+TRAK KLI++G + L +
Sbjct: 1004 DKNLIIYSCSKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPF 1063
Query: 1331 KLLINKVGEQ 1340
+ L + ++
Sbjct: 1064 RQLFKHIPDR 1073
Score = 48 (22.0 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILG 967
E + +DQRR + + AK+ ++LG
Sbjct: 1027 EAEILEDQRRLTVAITRAKNKLILLG 1052
>WB|WBGene00001016 [details] [associations]
symbol:dna-2 species:6239 "Caenorhabditis elegans"
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0017108 "5'-flap endonuclease activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IDA] [GO:0006259 "DNA
metabolic process" evidence=IDA] InterPro:IPR026851
InterPro:IPR014808 Pfam:PF08696 GO:GO:0005634 GO:GO:0009792
eggNOG:COG1112 GO:GO:0017108 GO:GO:0000014 GO:GO:0043142
GO:GO:0033567 PANTHER:PTHR10887:SF14 KO:K10742
GeneTree:ENSGT00550000074852 OMA:EHESLCH GO:GO:0043141 EMBL:Z50070
PIR:T22132 RefSeq:NP_496515.1 ProteinModelPortal:Q20371 SMR:Q20371
STRING:Q20371 PaxDb:Q20371 PRIDE:Q20371 EnsemblMetazoa:F43G6.1a
GeneID:174809 KEGG:cel:CELE_F43G6.1 UCSC:F43G6.1a CTD:174809
WormBase:F43G6.1a HOGENOM:HOG000016745 InParanoid:Q20371
NextBio:885596 ArrayExpress:Q20371 Uniprot:Q20371
Length = 1105
Score = 613 (220.8 bits), Expect = 2.1e-84, Sum P(4) = 2.1e-84
Identities = 163/527 (30%), Positives = 277/527 (52%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
T R GD +LS + +A+ LI E+S V S + R + +
Sbjct: 574 TFRPGDVCLLSNKK-HIAIGFALIDEVSDDQQIVKISTDKTIKSRYEAP---------FH 623
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
+DK M++ S N R ++VDL P + F+ PA+ I +
Sbjct: 624 LDKYTSMSTHSTTLGNLVYLLQNDEIGKRLRNILVDLLPPIIMDATGFNLTPAIKKIIIK 683
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
LN++QR+A++ L +D+ ++ G+PG+GKT+ + ++ L+ +LL ++T+SAVD
Sbjct: 684 AKLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVD 743
Query: 1003 NLLIKLKSQ--SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEE-----IKKRLDQVKVVA 1055
N+L KL + + +R+G + +I+K L A N E ++K + +VA
Sbjct: 744 NILTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVA 803
Query: 1056 VTCLGITNPLLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
TC + LL + FDV I+DEA P+ L L ++KFVLVGD QL PLV S +
Sbjct: 804 CTCHHVPRELLFSYRHFDVVIVDEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVVSRK 863
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
A++ G IS +L + HP + +L SQYRM + I LS+ L Y +RL CG++ ++ + +
Sbjct: 864 AKQEGAGISTMEKLQQSHPGVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSL 923
Query: 1175 -KVSD----LSSCSPWLKEALNPC--RPVIFVNTDML--PAYEAKDHQT--LNNPVEACL 1223
+ D + S +++AL+ +F++T + +D + + N EA L
Sbjct: 924 DRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTINSKMQCEDGEGGGMCNDGEAKL 983
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSF 1283
I+++ Q+ V + ++ +IG+++ Y Q + IR L+ +E++TID YQGR+K I+ S
Sbjct: 984 ISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSL 1043
Query: 1284 VRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
++ + + S LL D R+NVALTRA++KL++VG + +P+L
Sbjct: 1044 TWTNNSTKK--SELLKDERRVNVALTRARQKLVVVGCKNSAETIPVL 1088
Score = 314 (115.6 bits), Expect = 2.1e-84, Sum P(4) = 2.1e-84
Identities = 98/305 (32%), Positives = 148/305 (48%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD--VGRENNFLIVHPDVLVSGT 456
++ G R V+L + W I G T+N+IG G D V + +I++PD LV T
Sbjct: 159 DKEGTTRIVYLQDHWSEMSIEAGSTINLIGA-QAWGDRDFLVNDDVGIVILNPDALVPCT 217
Query: 457 RVAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARL 513
VA++ C R++VL+++ K S A LLGT++H+IFQ + K+ P M+ L +
Sbjct: 218 AVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRPVMENDLMKIWNK 277
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKI 573
K E L A + + L + WI L+ K ++
Sbjct: 278 QAPKYAEELVALSFTPSCLDAELQPYFSIICGWI---NKHYPLSNSFFSKREPLPSKSEL 334
Query: 574 SEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHR 633
EV DIEE W K GLKG ID ++R K S+ G + LE KTGK S EH
Sbjct: 335 LEVYDIEENIWDSKLGLKGKIDVTMRTK--SR-----GGMESLELKTGK---SSCSSEHT 384
Query: 634 AQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAST 693
QV+LY ++ S RY + I G + YL+ + V + +DL+G++ +RN+ + + T
Sbjct: 385 GQVLLYCMMQSSRYEQPIGPGNILYLKDGASHCVTPRAADLLGVLQQRNKLSVHF-EDPT 443
Query: 694 TQQLP 698
T LP
Sbjct: 444 TSNLP 448
Score = 54 (24.1 bits), Expect = 2.1e-84, Sum P(4) = 2.1e-84
Identities = 23/99 (23%), Positives = 38/99 (38%)
Query: 707 NKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAK---EMQVVKN-EIWCSRGSGGN 762
+K + N ++ + HL H + +W R I E K E +N ++W
Sbjct: 477 SKSNDKMKNFAENEMAHLEQNHIEYAANWIRWISAEWKCERERMTSQNKDLWLKSVQERV 536
Query: 763 HFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPN 801
CLS + S E S + + F R+ + S N
Sbjct: 537 EEGTCLSDLH-PVSEEMSNS---QKIIISFSRKFLKSSN 571
Score = 41 (19.5 bits), Expect = 2.1e-84, Sum P(4) = 2.1e-84
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 71 PSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKR 113
P+ S+P +K SP+S E + DD+ + +P IS +
Sbjct: 79 PTASSPKEKISPRSRSERI---QLQECDDD--DSFDAPVISSK 116
Score = 41 (19.5 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 941 SEKS-LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
++KS L D+RR + + A+ +++G + +T ++ L+ SI
Sbjct: 1050 TKKSELLKDERRVNVALTRARQKLVVVGCKNSAETIPVLFRFSQLIENHISI 1101
>UNIPROTKB|H0Y455 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 GO:GO:0017108 GO:GO:0043142 GO:GO:0033567
PANTHER:PTHR10887:SF14 EMBL:AL136233 HGNC:HGNC:2939
ProteinModelPortal:H0Y455 PRIDE:H0Y455 Ensembl:ENST00000440722
Bgee:H0Y455 Uniprot:H0Y455
Length = 375
Score = 701 (251.8 bits), Expect = 4.1e-68, P = 4.1e-68
Identities = 161/361 (44%), Positives = 220/361 (60%)
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKV 1053
SAVDN+L+KL I F+R+G+ + VH IQ+ C S +I S+ +++ + +
Sbjct: 2 SAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLI 60
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 61 VATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNR 120
Query: 1114 EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA
Sbjct: 121 EARALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAV 179
Query: 1174 IKV---SDLS---------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
I + D+ S +PWL P PV F+NTD +PA E + ++N EA
Sbjct: 180 INLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEA 239
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCI 1279
LI +T VK DIGII PY Q +I L S+ VE++T+DKYQGRDK +
Sbjct: 240 KLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIV 299
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
LVSFVRS+++ LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N +
Sbjct: 300 LVSFVRSNKD--GTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNS 357
Query: 1340 Q 1340
+
Sbjct: 358 E 358
>UNIPROTKB|F8VR31 [details] [associations]
symbol:DNA2 "DNA replication ATP-dependent
helicase/nuclease DNA2" species:9606 "Homo sapiens" [GO:0017108
"5'-flap endonuclease activity" evidence=IEA] [GO:0033567 "DNA
replication, Okazaki fragment processing" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR026851 InterPro:IPR014808 Pfam:PF08696 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14 EMBL:AL136233
HGNC:HGNC:2939 IPI:IPI01022599 ProteinModelPortal:F8VR31
Ensembl:ENST00000551118 UCSC:uc001jog.2 ArrayExpress:F8VR31
Bgee:F8VR31 Uniprot:F8VR31
Length = 807
Score = 407 (148.3 bits), Expect = 2.3e-61, Sum P(3) = 2.3e-61
Identities = 111/345 (32%), Positives = 185/345 (53%)
Query: 392 KVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
K L + QS E + + L DW + PGD +++ G+ + ++ +LI++PD
Sbjct: 64 KRLVITASQSLENKELCILRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPD 122
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEE 509
+L+SGT +A+S C RR+VL E + S+ + L+GT+LH++FQ + K L+E
Sbjct: 123 MLISGTSIASSIRCMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQE 181
Query: 510 YARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWI--ILFKD-SQDLNTPTVDFG 564
A +Q ++++ +Y +++++I + + + +P W + K+ S D +
Sbjct: 182 LAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLP 241
Query: 565 SDGLK-----KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
SD K +++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE K
Sbjct: 242 SDNSKDNSTCNIEVVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELK 300
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N S+EHR+QV+LYTLL ER ++GLL YL++ Q V D L+
Sbjct: 301 TGKESN---SIEHRSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLK 356
Query: 680 RRNEFA----NDIIKASTTQQ-----LPPMLRAYGGNKECSGLGN 715
RN+ A + I K++T Q+ LP ++ K CS +GN
Sbjct: 357 LRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKTCKYCSQIGN 401
Score = 272 (100.8 bits), Expect = 2.3e-61, Sum P(3) = 2.3e-61
Identities = 61/140 (43%), Positives = 86/140 (61%)
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
++PA E + ++N EA LI +T VK DIGII PY Q +I L S+
Sbjct: 661 LVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSI 720
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
VE++T+DKYQGRDK +LVSFVRS+++ LL DW R+NVA+TRAK KLI++G
Sbjct: 721 GMVEVNTVDKYQGRDKSIVLVSFVRSNKD--GTVGELLKDWRRLNVAITRAKHKLILLGC 778
Query: 1321 CRTLSKVPLLKLLINKVGEQ 1340
+L+ P L+ L+N + +
Sbjct: 779 VPSLNCYPPLEKLLNHLNSE 798
Score = 172 (65.6 bits), Expect = 6.4e-51, Sum P(3) = 6.4e-51
Identities = 73/265 (27%), Positives = 121/265 (45%)
Query: 824 LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
L +GD VI+S E L A++ G + EI+ V+ L RN S +S L +R
Sbjct: 512 LMAGDRVIVSGEERSLFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FR 561
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIW 940
+D++E N R +I+D P+F S SV D +
Sbjct: 562 LDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVAC 621
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST---MVHAVKALLMRGASILLTSYT 997
K LN QR+A+ KVL +KDY LI+GMPGTGKT+T +V A + + G S + +
Sbjct: 622 ILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVPAPEQVEKGGVSNVTEAKL 681
Query: 998 NSAVDNLLIKLKSQSIDFVRIG--RHEV-VHKEIQKHCLSAMNINSVEEIKKRLDQVKVV 1054
+ ++ +K D I R ++ + ++ + + +N+V++ + R + +V
Sbjct: 682 IVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLV 741
Query: 1055 AVTCL---GITNPLLTD-KKFDVCI 1075
+ G LL D ++ +V I
Sbjct: 742 SFVRSNKDGTVGELLKDWRRLNVAI 766
Score = 85 (35.0 bits), Expect = 2.3e-61, Sum P(3) = 2.3e-61
Identities = 23/91 (25%), Positives = 39/91 (42%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ KN IW S C+ +++ EH
Sbjct: 432 HLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHV 488
Query: 781 KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
K D +++++F +H P N GD +I
Sbjct: 489 KIVCDGQYLHNFQCKHGAIPVTNLMAGDRVI 519
Score = 42 (19.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 19/85 (22%), Positives = 35/85 (41%)
Query: 1097 FVLVGDHYQLPPLVQSTEARE-----NGMEISLFRRLSEEHPQAISALQS------QYRM 1145
++ G Y +P + RE N M SLF R+S+ + + L S + +
Sbjct: 335 YLKTGQMYPVP--ANHLDKRELLKLRNQMAFSLFHRISKSATRQKTQLASLPQIIEEEKT 392
Query: 1146 CQGIMELSNALIYG----DRLSCGS 1166
C+ ++ N +Y ++ C S
Sbjct: 393 CKYCSQIGNCALYSRAVEQQMDCSS 417
>UNIPROTKB|I3LBB7 [details] [associations]
symbol:I3LBB7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000030264 OMA:STCHITH Uniprot:I3LBB7
Length = 249
Score = 510 (184.6 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 116/246 (47%), Positives = 153/246 (62%)
Query: 1059 LGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN 1118
+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR
Sbjct: 1 MGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARAL 60
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI---K 1175
GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++A+A + K
Sbjct: 61 GMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPK 119
Query: 1176 VSDLS---------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAK 1226
+ D+ S +PW+ A P PV F+NTD +PA E + ++N EA L+
Sbjct: 120 LKDVKLELEFYADYSENPWMVGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLVVY 179
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV---EIHTIDKYQGRDKDCILVSF 1283
+T VK +IGII PY Q +I LS SSV E++T+DKYQGRDK ILVSF
Sbjct: 180 LTSIFVKAGCNPCNIGIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSF 239
Query: 1284 VRSSEN 1289
VRS+ +
Sbjct: 240 VRSNRD 245
>TAIR|locus:2056896 [details] [associations]
symbol:AT2G03270 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AC005313 EMBL:AC006284 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 UniGene:At.10455 UniGene:At.71239 EMBL:AY045820
EMBL:AY091361 IPI:IPI00521943 PIR:T02699 RefSeq:NP_565299.1
ProteinModelPortal:O81047 SMR:O81047 STRING:O81047 PaxDb:O81047
PRIDE:O81047 EnsemblPlants:AT2G03270.1 GeneID:814856
KEGG:ath:AT2G03270 TAIR:At2g03270 InParanoid:O81047 OMA:GHPSRVS
PhylomeDB:O81047 ProtClustDB:CLSN2687941 ArrayExpress:O81047
Genevestigator:O81047 Uniprot:O81047
Length = 639
Score = 336 (123.3 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 96/312 (30%), Positives = 159/312 (50%)
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
+V ++ K D V+ T G L ++ FD+ I+DE Q L+ S+ +L
Sbjct: 335 AVSDVIKNAD---VILTTLTGALTRKLDNRTFDLVIIDEGAQALEVACWIALLKGSRCIL 391
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMCQGIMELSNALIY 1158
GDH QLPP +QS EA G+ +LF RL++ + I S L QYRM + IM S+ +Y
Sbjct: 392 AGDHLQLPPTIQSAEAERKGLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELY 451
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ-TLNN 1217
++++ S ++ + +++ S EA ++ V+T E KD + + N
Sbjct: 452 DNKITAHSSVASHMLFDLENVTKSSS--TEAT-----LLLVDTAGCDMEEKKDEEESTYN 504
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR----HSLSVSSVEIHTIDKYQG 1273
EA + + L+++ ++ DIGIITPY +Q L+R + +EI T+D +QG
Sbjct: 505 EGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQG 564
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
R+K+ I++S VRS+ L D R+NVA+TR++++ +V T+S LK +
Sbjct: 565 REKEAIIISMVRSNSKKE---VGFLKDQRRMNVAVTRSRRQCCIVCDTETVSSDAFLKRM 621
Query: 1334 INKVGEQSGILN 1345
I E L+
Sbjct: 622 IEYFEEHGEYLS 633
Score = 162 (62.1 bits), Expect = 1.4e-38, Sum P(2) = 1.4e-38
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
SV +D S+ K+L+ Q+ AI K L++KD L+ G PGTGKT+T+V V + R
Sbjct: 174 SVSKKD-VKSFTPFNKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKR 232
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH-----EVVHKEIQKHCLSAMNINSVE 1042
G+ IL + +N AVDN++ +L + VR+G +V+ + L N
Sbjct: 233 GSKILACAASNIAVDNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLAN 292
Query: 1043 EIKKRL 1048
+I+K +
Sbjct: 293 DIRKEM 298
>POMBASE|SPCC737.07c [details] [associations]
symbol:SPCC737.07c "DNA polymerase alpha-associated DNA
helicase A (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006273
"lagging strand elongation" evidence=ISO] [GO:0033203 "DNA helicase
A complex" evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISO] [GO:0043596 "nuclear replication
fork" evidence=IC] [GO:0005658 "alpha DNA polymerase:primase
complex" evidence=ISO] InterPro:IPR003593 SMART:SM00382
PomBase:SPCC737.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG1112 GO:GO:0006273
GO:GO:0043141 PIR:T41580 RefSeq:NP_588369.1
ProteinModelPortal:O94247 STRING:O94247 EnsemblFungi:SPCC737.07c.1
GeneID:2539412 KEGG:spo:SPCC737.07c HOGENOM:HOG000185831
OMA:ERTIFLE OrthoDB:EOG444PTN NextBio:20800576 GO:GO:0033203
Uniprot:O94247
Length = 660
Score = 296 (109.3 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 93/285 (32%), Positives = 145/285 (50%)
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
KVV T G + L ++FD I+DEA Q P PL+ +K +L GDH QL P VQ
Sbjct: 364 KVVFCTLHGAGSRQLKGQRFDAVIIDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQ 423
Query: 1112 STEARENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
S IS+F RL + + L QYRM + I + + Y +L ++E+
Sbjct: 424 SKRPY-----ISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSKL-VPAEEVK 477
Query: 1171 NAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE----AKDHQTL-----NNPVEA 1221
K + DL + ++E P+ F +T L Y+ ++D Q +N EA
Sbjct: 478 --KRLLMDLEN----VEETELTDSPIYFYDT--LGNYQEDDRSEDMQNFYQDSKSNHWEA 529
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIH--TIDKYQGRDKDCI 1279
+++ L++ +E KDI ++TPYN+Q LIR L +E+ ++DK QGR+K+ I
Sbjct: 530 QIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAI 589
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ S VRS++ R L + R+NVA+TR K+ L ++G T+
Sbjct: 590 IFSLVRSND-VREV--GFLAEKRRLNVAITRPKRHLCVIGDSNTV 631
Score = 162 (62.1 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 35/95 (36%), Positives = 55/95 (57%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K LN Q++A+ + K+ +LI G PGTGKT T+V ++ L++R IL+ +N AVD
Sbjct: 208 KELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVCGASNLAVD 267
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN 1037
N++ +L S I VR+G + I H L ++
Sbjct: 268 NIVDRLSSSGIPMVRLGHPARLLPSILDHSLDVLS 302
>UNIPROTKB|E2R760 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0032797 "SMN complex" evidence=IEA] [GO:0032575
"ATP-dependent 5'-3' RNA helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000049
"tRNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575
PANTHER:PTHR10887:SF23 EMBL:AAEX03011604 Ensembl:ENSCAFT00000038980
NextBio:20858044 Uniprot:E2R760
Length = 992
Score = 394 (143.8 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 124/400 (31%), Positives = 200/400 (50%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + + Q+ D
Sbjct: 253 RLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFVNNR-QTQD 311
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINSVEE--IKKRLDQVKVVAVTCLGITN--PL--LTD 1068
R + V + E++ L + EE + + L VV T G ++ PL L D
Sbjct: 312 --RREKSSVWN-EVK---LLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPD 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL RL
Sbjct: 366 THFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERL 425
Query: 1129 SEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+EEH + + L QYRM Q IM ++ +Y +L+ +A ++ DL + +
Sbjct: 426 AEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTA-HPSVAGHLLR--DLPGVAATEE 482
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T +E +D Q+ NP E L++ Q LV ++ DI +IT
Sbjct: 483 TGI----PLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVIT 538
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 539 PYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 595
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT+S LK L++ E +
Sbjct: 596 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEV 635
Score = 173 (66.0 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 66/235 (28%), Positives = 111/235 (47%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSF--SKPLRLPGRNSSSDADSLLHEVWRI 883
SGD V L E ++LA +G++T I++ V+V+F S +L S D D +R+
Sbjct: 85 SGDIVGLYDEGNQLA--TGILTRITQRSVTVAFDASHDFQL-----SLDRDR--ERAYRL 135
Query: 884 DKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
K + + R +I L S + ++ P ++
Sbjct: 136 LK--LANDITYKRLKKALITLKKYHSGPASSLIEVLFGGSAPSPASNTEPP----LFCNT 189
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N AVDN
Sbjct: 190 SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDN 249
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVKV 1053
L+ +L +R+G + + IQ+H L A+ N V +I+K +DQ V
Sbjct: 250 LVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFV 304
>UNIPROTKB|E2R8W1 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
CTD:3508 OMA:HARQRIS PANTHER:PTHR10887:SF23 EMBL:AAEX03011604
RefSeq:XP_540807.2 Ensembl:ENSCAFT00000017093 GeneID:483686
KEGG:cfa:483686 Uniprot:E2R8W1
Length = 1010
Score = 394 (143.8 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 124/400 (31%), Positives = 200/400 (50%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + + Q+ D
Sbjct: 253 RLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFVNNR-QTQD 311
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINSVEE--IKKRLDQVKVVAVTCLGITN--PL--LTD 1068
R + V + E++ L + EE + + L VV T G ++ PL L D
Sbjct: 312 --RREKSSVWN-EVK---LLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPD 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL RL
Sbjct: 366 THFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERL 425
Query: 1129 SEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+EEH + + L QYRM Q IM ++ +Y +L+ +A ++ DL + +
Sbjct: 426 AEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTA-HPSVAGHLLR--DLPGVAATEE 482
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T +E +D Q+ NP E L++ Q LV ++ DI +IT
Sbjct: 483 TGI----PLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVIT 538
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 539 PYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 595
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT+S LK L++ E +
Sbjct: 596 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEV 635
Score = 173 (66.0 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 66/235 (28%), Positives = 111/235 (47%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSF--SKPLRLPGRNSSSDADSLLHEVWRI 883
SGD V L E ++LA +G++T I++ V+V+F S +L S D D +R+
Sbjct: 85 SGDIVGLYDEGNQLA--TGILTRITQRSVTVAFDASHDFQL-----SLDRDR--ERAYRL 135
Query: 884 DKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
K + + R +I L S + ++ P ++
Sbjct: 136 LK--LANDITYKRLKKALITLKKYHSGPASSLIEVLFGGSAPSPASNTEPP----LFCNT 189
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N AVDN
Sbjct: 190 SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNIAVDN 249
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVKV 1053
L+ +L +R+G + + IQ+H L A+ N V +I+K +DQ V
Sbjct: 250 LVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFV 304
>UNIPROTKB|E1C0J4 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0003677 GO:GO:0008270 GO:GO:0004386
GeneTree:ENSGT00550000074391 EMBL:AADN02071779 IPI:IPI00598917
Ensembl:ENSGALT00000005099 NextBio:20823079 ArrayExpress:E1C0J4
Uniprot:E1C0J4
Length = 1117
Score = 339 (124.4 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 104/306 (33%), Positives = 154/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 603 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 662
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 663 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 721
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 722 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 771
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 772 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 831
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 832 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 888
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 889 NYYKEQ 894
Score = 109 (43.4 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 58/243 (23%), Positives = 95/243 (39%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 346 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 402
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDP 934
+ H +++D TSF R + L + + Q P
Sbjct: 403 EVTHN-FQVDFVWKSTSFD--RMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLP 459
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILL 993
LN Q A+ K + + +LI G PGTGKT T V L +G +L+
Sbjct: 460 KRFTAQGLPDLNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLV 518
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLD 1049
+ +N AVD L K+ + VR+ E + + L N++S+ E++K L
Sbjct: 519 CAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQ 577
Query: 1050 QVK 1052
Q+K
Sbjct: 578 QLK 580
Score = 51 (23.0 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 144 CNGRGNTSGSHIVNHLVRAKC 164
Score = 48 (22.0 bits), Expect = 4.6e-32, Sum P(3) = 4.6e-32
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPK 587
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 278 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW--D 333
Query: 588 YGL-KGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
GL K I K +S + G + L +K P
Sbjct: 334 LGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAP 371
>UNIPROTKB|E1BEK9 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071044 "histone mRNA catabolic process" evidence=IEA]
[GO:0044530 "supraspliceosomal complex" evidence=IEA] [GO:0035145
"exon-exon junction complex" evidence=IEA] [GO:0009048 "dosage
compensation by inactivation of X chromosome" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] InterPro:IPR018999
Pfam:PF09416 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0007049 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145
GeneTree:ENSGT00550000074391 OMA:MFYEGSL EMBL:DAAA02019036
IPI:IPI00685259 Ensembl:ENSBTAT00000027868 Uniprot:E1BEK9
Length = 1127
Score = 339 (124.4 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 104/306 (33%), Positives = 154/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 613 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 672
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 673 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 731
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 732 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 781
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 782 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 841
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 842 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 898
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 899 NYYKEQ 904
Score = 105 (42.0 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 480 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 538
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 539 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 590
Score = 51 (23.0 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 143 CNGRGNTSGSHIVNHLVRAKC 163
Score = 47 (21.6 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 277 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 331
>UNIPROTKB|E1C0J3 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000785 "chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0035145 "exon-exon
junction complex" evidence=IEA] [GO:0044530 "supraspliceosomal
complex" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AADN02071779 IPI:IPI00571950 Ensembl:ENSGALT00000005101
ArrayExpress:E1C0J3 Uniprot:E1C0J3
Length = 1128
Score = 339 (124.4 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 104/306 (33%), Positives = 154/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 614 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 673
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 674 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 732
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 733 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 782
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 783 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 842
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 843 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 899
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 900 NYYKEQ 905
Score = 105 (42.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 481 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 539
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 540 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 591
Score = 51 (23.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 144 CNGRGNTSGSHIVNHLVRAKC 164
Score = 47 (21.6 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 278 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 332
>UNIPROTKB|Q92900 [details] [associations]
symbol:UPF1 "Regulator of nonsense transcripts 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009048 "dosage compensation by
inactivation of X chromosome" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000184 "nuclear-transcribed
mRNA catabolic process, nonsense-mediated decay"
evidence=IDA;NAS;IMP;TAS] [GO:0006449 "regulation of translational
termination" evidence=IMP;NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0003723 "RNA binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=NAS] [GO:0071044 "histone mRNA catabolic
process" evidence=IMP] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0044530 "supraspliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0006260 "DNA replication" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IDA] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0007049 "cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005524 GO:GO:0010467 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0006260 GO:GO:0008270 GO:GO:0006281
GO:GO:0000785 GO:GO:0003682 GO:GO:0003723 GO:GO:0007049
GO:GO:0006406 GO:GO:0000932 eggNOG:COG1112 GO:GO:0071044
GO:GO:0009048 GO:GO:0004004 GO:GO:0035145 EMBL:AC003972
GO:GO:0044530 GO:GO:0006449 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL CTD:5976 EMBL:U65533 EMBL:U59323 EMBL:D86988
EMBL:AF074016 EMBL:BC039817 IPI:IPI00034049 IPI:IPI00399170
RefSeq:NP_002902.2 UniGene:Hs.515266 PDB:2GJK PDB:2GK6 PDB:2GK7
PDB:2IYK PDB:2WJV PDB:2WJY PDB:2XZO PDB:2XZP PDBsum:2GJK
PDBsum:2GK6 PDBsum:2GK7 PDBsum:2IYK PDBsum:2WJV PDBsum:2WJY
PDBsum:2XZO PDBsum:2XZP ProteinModelPortal:Q92900 SMR:Q92900
DIP:DIP-29875N IntAct:Q92900 MINT:MINT-5005507 STRING:Q92900
PhosphoSite:Q92900 DMDM:17380291 PaxDb:Q92900 PRIDE:Q92900
Ensembl:ENST00000262803 GeneID:5976 KEGG:hsa:5976 UCSC:uc002nkf.3
UCSC:uc002nkg.3 GeneCards:GC19P018942 HGNC:HGNC:9962 HPA:HPA019587
HPA:HPA020857 MIM:601430 neXtProt:NX_Q92900 PharmGKB:PA34328
HOVERGEN:HBG061556 InParanoid:Q92900 ChiTaRS:UPF1
EvolutionaryTrace:Q92900 GenomeRNAi:5976 NextBio:23259
ArrayExpress:Q92900 Bgee:Q92900 CleanEx:HS_UPF1
Genevestigator:Q92900 GermOnline:ENSG00000005007 Uniprot:Q92900
Length = 1129
Score = 339 (124.4 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 104/306 (33%), Positives = 154/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 615 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 674
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 675 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 733
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 734 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 783
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 784 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 843
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 844 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 900
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 901 NYYKEQ 906
Score = 105 (42.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 482 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 540
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 541 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 592
Score = 51 (23.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 145 CNGRGNTSGSHIVNHLVRAKC 165
Score = 47 (21.6 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 279 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 333
>UNIPROTKB|E2RL81 [details] [associations]
symbol:UPF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 GeneTree:ENSGT00550000074391 OMA:MFYEGSL
EMBL:AAEX03012279 Ensembl:ENSCAFT00000023180 Uniprot:E2RL81
Length = 1130
Score = 339 (124.4 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 104/306 (33%), Positives = 154/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 616 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 675
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 676 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 734
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 735 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 784
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 785 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 844
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 845 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 901
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 902 NYYKEQ 907
Score = 105 (42.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 483 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 541
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 542 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 593
Score = 51 (23.0 bits), Expect = 6.1e-32, Sum P(3) = 6.1e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 146 CNGRGNTSGSHIVNHLVRAKC 166
Score = 47 (21.6 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 280 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 334
>TAIR|locus:2162858 [details] [associations]
symbol:AT5G35970 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] EMBL:CP002688 GO:GO:0009570 GO:GO:0003677
GO:GO:0009941 InterPro:IPR014001 SMART:SM00487 IPI:IPI00520082
RefSeq:NP_198446.3 UniGene:At.45828 ProteinModelPortal:F4K1G7
SMR:F4K1G7 PRIDE:F4K1G7 EnsemblPlants:AT5G35970.1 GeneID:833589
KEGG:ath:AT5G35970 OMA:DHFQREL Uniprot:F4K1G7
Length = 961
Score = 301 (111.0 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 96/328 (29%), Positives = 158/328 (48%)
Query: 1026 KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTD-KKFDVCIMDEAGQTTL 1084
+++ K + E +K+ L +VV T +G +PL+ + FD+ ++DEAGQ+
Sbjct: 616 RQLLKQLGKTLKKKEKETVKEILSNAQVVFATNIGAADPLIRRLETFDLVVIDEAGQSIE 675
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA-LQSQY 1143
P P++ + +L GD QL P+V S +A E G+ +SL R + H ++ L +QY
Sbjct: 676 PSCWIPILQGKRCILSGDPCQLAPVVLSRKALEGGLGVSLLERAASLHDGVLATKLTTQY 735
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA-LNPCRPVIFVNTD 1202
RM I ++ +YG L +A S L SP++K + C P++ ++T
Sbjct: 736 RMNDVIAGWASKEMYGGWLK-------SAPSVASHLLIDSPFVKATWITQC-PLVLLDTR 787
Query: 1203 M------LPAYEAKDHQ---TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
M + E D +L N EA ++ L+ + I + +PY +Q L
Sbjct: 788 MPYGSLSVGCEERLDPAGTGSLYNEGEADIVVNHVISLIYAGVSPMAIAVQSPYVAQVQL 847
Query: 1254 IRHSLS----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
+R L VE+ TID +QGR+ D +++S VRS N LGD R+NVA+T
Sbjct: 848 LRERLDDFPVADGVEVATIDSFQGREADAVIISMVRS--NNLGAVG-FLGDSRRMNVAIT 904
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
RA+K + +V T+ L L+ +
Sbjct: 905 RARKHVAVVCDSSTICHNTFLARLLRHI 932
Score = 143 (55.4 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 57/245 (23%), Positives = 98/245 (40%)
Query: 823 TLRSGDYVILSTESDRLAVAS----GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
TL GD V + R A A+ G + + S+ + L R+ L
Sbjct: 355 TLSPGDMVCIRVCDSRGAGATACTQGFVHNLGEDGCSIGVA----LESRHGDPTFSKLFG 410
Query: 879 EVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ RID+ + N + + + A F G + Y
Sbjct: 411 KSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSISVVATLFGDGEDITWLEQNDY 470
Query: 939 I-WSEKSLNDD---------QRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKALLMR 987
+ WSE L+D+ QRRAI + K +I+ G PGTGKT + + + +
Sbjct: 471 VDWSEAELSDEPVSKLFDSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQ 530
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
G +L+T+ TN+AVDN++ KL ++ VR+G + + L + + + +
Sbjct: 531 GERVLVTAPTNAAVDNMVEKLLHLGLNIVRVGNPARISSAVASKSLGEIVNSKLASFRAE 590
Query: 1048 LDQVK 1052
L++ K
Sbjct: 591 LERKK 595
Score = 39 (18.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 10/56 (17%), Positives = 28/56 (50%)
Query: 115 KFSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTI 170
K +P + + + + G+++TW N+ + ++ E + L +SS+ ++ +
Sbjct: 444 KKNPSISVVATLFGDGEDITW--LEQNDYVDWSEAELSDEPVSKLFDSSQRRAIAL 497
>ZFIN|ZDB-GENE-040426-2836 [details] [associations]
symbol:upf1 "upf1 regulator of nonsense
transcripts homolog (yeast)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IMP] InterPro:IPR018999 Pfam:PF09416
ZFIN:ZDB-GENE-040426-2836 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0009790 GO:GO:0004386
HOGENOM:HOG000205990 KO:K14326 CTD:5976 HOVERGEN:HBG061556
EMBL:BC045353 EMBL:FM986817 IPI:IPI00491565 RefSeq:NP_998639.1
UniGene:Dr.96025 SMR:Q7ZVZ4 STRING:Q7ZVZ4 GeneID:406783
KEGG:dre:406783 NextBio:20818296 Uniprot:Q7ZVZ4
Length = 1100
Score = 337 (123.7 bits), Expect = 8.8e-32, Sum P(3) = 8.8e-32
Identities = 104/306 (33%), Positives = 153/306 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 584 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 643
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 644 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 702
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 703 NGVTAADRLK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 752
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 753 VEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 812
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 813 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 869
Query: 1335 NKVGEQ 1340
N EQ
Sbjct: 870 NYYKEQ 875
Score = 105 (42.0 bits), Expect = 8.8e-32, Sum P(3) = 8.8e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 451 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 509
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 510 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 561
Score = 51 (23.0 bits), Expect = 8.8e-32, Sum P(3) = 8.8e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 124 CNGRGNTSGSHIVNHLVRAKC 144
Score = 47 (21.6 bits), Expect = 2.3e-31, Sum P(3) = 2.3e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 258 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 312
>UNIPROTKB|F1SUI6 [details] [associations]
symbol:DNA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0033567 "DNA replication, Okazaki fragment
processing" evidence=IEA] [GO:0017108 "5'-flap endonuclease
activity" evidence=IEA] InterPro:IPR026851 GO:GO:0017108
GO:GO:0043142 GO:GO:0033567 PANTHER:PTHR10887:SF14
GeneTree:ENSGT00550000074852 EMBL:CU468421
Ensembl:ENSSSCT00000011207 Uniprot:F1SUI6
Length = 395
Score = 293 (108.2 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 81/210 (38%), Positives = 114/210 (54%)
Query: 824 LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
L +GD +ILS E L A++ G + E++ V+ L RN S +S L +R
Sbjct: 172 LMTGDRIILSGEERTLFALSRGYVKEMNMTTVTC-------LLDRNLSVLPESTL---FR 221
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDS--GSVFSQDPALSYIW 940
+D++E N R +I+D P+F S SV D +
Sbjct: 222 LDQEEKNCDIDTPLGNLSKLMENTYASQKLRDLIIDFREPQFISYLSSVLPHDAKDTVAC 281
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SA
Sbjct: 282 ILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSA 341
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQK 1030
VDN+L+KL I F+R+G+ + VH +IQK
Sbjct: 342 VDNILLKLAKFKIGFLRLGQTQKVHPDIQK 371
Score = 98 (39.6 bits), Expect = 9.0e-32, Sum P(2) = 9.0e-32
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNH 763
G+ +G+ HL H + W ++ LE++ KN IW S
Sbjct: 75 GSAVLTGMLPQIKEETQHLKPTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEE 134
Query: 764 FTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
C+ +++ EH K+ D ++++ F R++ P N GD +I
Sbjct: 135 SGSCIGNLI---RTEHVKTVCDGQYLHTFQRKNGSMPTTNLMTGDRII 179
>MGI|MGI:107995 [details] [associations]
symbol:Upf1 "UPF1 regulator of nonsense transcripts homolog
(yeast)" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=ISO]
[GO:0000785 "chromatin" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006260 "DNA replication" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006449 "regulation of
translational termination" evidence=ISO] [GO:0007049 "cell cycle"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=ISO] [GO:0044530
"supraspliceosomal complex" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0071044 "histone mRNA catabolic process"
evidence=ISO] InterPro:IPR018999 Pfam:PF09416 MGI:MGI:107995
GO:GO:0005524 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0000785
GO:GO:0003682 GO:GO:0003723 GO:GO:0007049 GO:GO:0000932
eggNOG:COG1112 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GO:GO:0006449 GeneTree:ENSGT00550000074391
HOGENOM:HOG000205990 KO:K14326 OMA:MFYEGSL CTD:5976
HOVERGEN:HBG061556 ChiTaRS:UPF1 EMBL:AF322655 EMBL:AY597039
EMBL:AY597038 EMBL:AK148196 EMBL:BC030916 EMBL:BC052149
EMBL:BC056442 EMBL:AF182947 IPI:IPI00420949 IPI:IPI00850525
RefSeq:NP_001116301.1 RefSeq:NP_109605.2 UniGene:Mm.390048
ProteinModelPortal:Q9EPU0 SMR:Q9EPU0 STRING:Q9EPU0
PhosphoSite:Q9EPU0 PaxDb:Q9EPU0 PRIDE:Q9EPU0
Ensembl:ENSMUST00000075666 GeneID:19704 KEGG:mmu:19704
UCSC:uc009mab.2 UCSC:uc012gfa.1 InParanoid:Q9EPU0 OrthoDB:EOG4P8FH8
NextBio:297078 Bgee:Q9EPU0 Genevestigator:Q9EPU0
GermOnline:ENSMUSG00000058301 Uniprot:Q9EPU0
Length = 1124
Score = 337 (123.7 bits), Expect = 9.9e-32, Sum P(3) = 9.9e-32
Identities = 103/310 (33%), Positives = 156/310 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
++ L V+ TC+G +P L +F ++DE+ Q T P + P++ +K +LVGDH
Sbjct: 610 RELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDH 669
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V +A + G+ SLF RL + I LQ QYRM + + + Y L
Sbjct: 670 CQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQ 728
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G K K D W + P +P+ F T + LN EA
Sbjct: 729 NGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAAN 778
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQAN-LIR--------HSLSVSSVEIHTIDKYQGR 1274
+ KIT +L+K + IGIITPY Q + L++ H+ VEI ++D +QGR
Sbjct: 779 VEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGR 838
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ + LSK PL L+
Sbjct: 839 EKDFIILSCVRANEHQG---IGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLL 895
Query: 1335 NKVGEQSGIL 1344
+ EQ ++
Sbjct: 896 SYYKEQKALV 905
Score = 105 (42.0 bits), Expect = 9.9e-32, Sum P(3) = 9.9e-32
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K + + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 477 LNHSQVYAV-KTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 535
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 536 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLK 587
Score = 51 (23.0 bits), Expect = 9.9e-32, Sum P(3) = 9.9e-32
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 710 CSGLGNMFDSHIY-HLTTAHC 729
C+G GN SHI HL A C
Sbjct: 140 CNGRGNTSGSHIVNHLVRAKC 160
Score = 47 (21.6 bits), Expect = 2.6e-31, Sum P(3) = 2.6e-31
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 531 DIHKTLVEAIPKMLNWIILFKDS---QDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
D+ K V+ P+ + ++ ++D+ Q++ P V +D KKLK S+ D + W
Sbjct: 274 DLEKPGVDEEPQHV--LLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRW 328
>UNIPROTKB|F1MHU8 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00154 SMART:SM00382 SMART:SM00393
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0051260 GO:GO:0043022
GO:GO:0000049 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:DAAA02063651 IPI:IPI01017505
RefSeq:XP_003584325.1 RefSeq:XP_003588118.1 UniGene:Bt.103594
Ensembl:ENSBTAT00000044489 GeneID:618606 KEGG:bta:618606
Uniprot:F1MHU8
Length = 981
Score = 384 (140.2 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 126/396 (31%), Positives = 194/396 (48%)
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK-LKSQSIDFVRI 1018
K L LG P S H++ A+L R S + + +D K K+Q
Sbjct: 256 KQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRRDIDQAWAKNRKTQDKREKSN 315
Query: 1019 GRHEV--VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT--NPL--LTDKKFD 1072
R E+ + KE++ +AM +E L VV T G + PL L D FD
Sbjct: 316 FRDEIKLLRKELKDREEAAM----LES----LAAASVVLATNTGASADGPLKLLPDSHFD 367
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+ ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL+E H
Sbjct: 368 MVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAERH 427
Query: 1133 PQ-AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
A+ L QYRM Q I ++ +Y +L+ +A ++ DL + + +
Sbjct: 428 GAGALRMLTVQYRMHQAIARWASEALYHGQLTA-HPSVAGHLLR--DLPGVAATEETGV- 483
Query: 1192 PCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P++ V+T L E D Q+ NP E L+ Q LV + DI +ITPYN
Sbjct: 484 ---PLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVITPYNL 540
Query: 1250 QANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q +L+R SL+ + +EI ++D +QGR+K+ +++SFVRS+ R L + RINVA
Sbjct: 541 QVDLLRQSLAHRLPELEIRSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVA 597
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
+TRA++ + +V RT+S LK L++ + E +
Sbjct: 598 VTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEV 633
Score = 171 (65.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 65/230 (28%), Positives = 110/230 (47%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDK 885
SGD V L ES +LA +G++T I++ V+V+F + +S D H +R+ K
Sbjct: 85 SGDIVGLYDESGQLA--TGILTRITQKAVTVAFDE-----SHDSQLSLDQE-HS-YRLLK 135
Query: 886 DEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSL 945
+ + R +I L S S+ P L++ +L
Sbjct: 136 --LANDVTYKRLKKALISLKKHHAGPASSLIEVLFGASDPSPP--SEMPPLTFC--NPAL 189
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + RG+ +L + +N AVDNL+
Sbjct: 190 DASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVDNLV 249
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ 1050
+L +R+G + IQ+H L A+ S V +I++ +DQ
Sbjct: 250 ERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRRDIDQ 299
Score = 54 (24.1 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 557 NTPTVDFGSDGLKKLKISEVTDIEEM-AWAPKYGLKGMIDASI---RVKIESKRNEINGM 612
+TP F + L+ L++ ++EE +W LK + + ++++ S+R + G
Sbjct: 3 STPVESFVTKQLELLELERDAEVEERRSWQENVSLKELQSRGVCLLKLQVSSQRTGLYGR 62
Query: 613 IL 614
+L
Sbjct: 63 LL 64
>UNIPROTKB|E1BQD2 [details] [associations]
symbol:C4H4orf21 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AADN02009328
IPI:IPI00577016 Ensembl:ENSGALT00000019715 Uniprot:E1BQD2
Length = 913
Score = 354 (129.7 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 119/332 (35%), Positives = 168/332 (50%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
V K I++H L N K L QVKVV VTC P L KF V ++DE Q T
Sbjct: 582 VRKSIERHKLGT-N-------KTALQQVKVVGVTCAACPFPCLDTLKFPVVVLDECSQMT 633
Query: 1084 LPVSLGPLM-F-ASKFVLVGDHYQLPPLVQSTEA-RENGMEISLFRRLSEEHPQAISALQ 1140
P SL P+ F K VLVGD QLPP +Q +E+ E G+E +LF RL + I L+
Sbjct: 634 EPTSLLPIARFQCEKLVLVGDPKQLPPTIQGSESIHEKGLEQTLFDRLCLMGHKTI-LLR 692
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYR I ++N L Y L G E + S WL C F +
Sbjct: 693 TQYRCHPAISAIANELFYEGNLIDGVSE--------KERSPLLDWLPTL---C----FYS 737
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA----NLIR- 1255
+ L E +D+ + N E K Q L+ + I+G +G+IT Y SQ NL+R
Sbjct: 738 VNGLEQIE-RDN-SFYNMAEVHFTVKFIQALIASGIDGSAVGVITFYKSQMYKLQNLLRS 795
Query: 1256 -HS--LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
HS V +V++ T+D +QG +K+ +++S VR+ + T S R+NVALTRAK
Sbjct: 796 IHSEAFPVKAVQVSTVDAFQGAEKEIVVLSCVRTRQT--GFTDSE----KRMNVALTRAK 849
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+ L++VG+ LSK L + +IN G ++G+
Sbjct: 850 RHLLIVGNLACLSKNRLYERVINHCKGRENGL 881
Score = 82 (33.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
+L+ S TN AVD +L+ L DF+R+G + K I + L A + N E++K+ L
Sbjct: 509 LLIASSTNVAVDRILLCLLDLGFEDFIRVGSIRKITKAILPYSLHAGSGNENEQLKELLA 568
Query: 1050 QVK 1052
+K
Sbjct: 569 LMK 571
>DICTYBASE|DDB_G0271732 [details] [associations]
symbol:DDB_G0271732 "AN1-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0032508 "DNA duplex unwinding"
evidence=ISS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51061
SMART:SM00382 dictyBase:DDB_G0271732 GO:GO:0005524 GO:GO:0003677
GO:GO:0008270 EMBL:AAFI02000006 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10
OMA:HARQRIS RefSeq:XP_645520.1 ProteinModelPortal:Q75JA0
PRIDE:Q75JA0 EnsemblProtists:DDB0232283 GeneID:8618149
KEGG:ddi:DDB_G0271732 InParanoid:Q75JA0 ProtClustDB:CLSZ2846906
Uniprot:Q75JA0
Length = 1024
Score = 382 (139.5 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 101/340 (29%), Positives = 178/340 (52%)
Query: 1007 KLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQV----KVVAVTCLGIT 1062
++KS S +++ +H + + + + + I+ K + QV V+ T G +
Sbjct: 351 EIKSLSKQLLKVKQHS--ERRVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGAS 408
Query: 1063 NPLLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+ L FD ++DE Q P+ +K +L GDH QLPP + S EA + G+
Sbjct: 409 DSSLKGIDNFDWVVIDECAQALEASCWIPIQKGNKLLLAGDHQQLPPTIHSMEAAKMGLS 468
Query: 1122 ISLFRRLSEEHPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
I+LF R+ +++ +S L + QYRM IM+ S+ Y ++ ++N + D
Sbjct: 469 ITLFERIIKQYGDQVSRLLNVQYRMNHKIMDWSSMEFYNSKM-IADKSVSNHLLVTGD-- 525
Query: 1181 SCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
SP ++ L P++ ++T DM + + + NN E ++ + ++L++ ++
Sbjct: 526 --SPKIRNTLTTTCPLLMIDTSGCDMEESQDDEGESKFNNG-EVIVVKRHIEKLIECGVK 582
Query: 1238 GKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
DIG+ITPYN Q L++ LS SS+EI T+D +QGR+KD I++S VRS+ + +
Sbjct: 583 PNDIGVITPYNGQVKLLKSYLSKKYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVG 642
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L D R NVA+TRA+K +++V T+S LK +++
Sbjct: 643 FLTED-RRTNVAITRARKHVVVVCDTDTISSHEPLKRMVD 681
Score = 148 (57.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 44/130 (33%), Positives = 66/130 (50%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K LN Q+ AI+ L++ D A I G PGTGKT+T+V + L+ G +L +N +VD
Sbjct: 233 KGLNQSQKEAILFSLSSNDVACIHGPPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSVD 292
Query: 1003 NLLIKLKSQS---------IDFVRIGRHEVVHKEIQKHCLSAMNINSV--EEIKKRLDQV 1051
N+L KL S I+ RIG + ++ KH L NS + IK D++
Sbjct: 293 NMLEKLLEYSNSSSCNGFLINATRIGHPTRILPQLLKHTLDHKTKNSEGGQIIKGIKDEI 352
Query: 1052 KVVAVTCLGI 1061
K ++ L +
Sbjct: 353 KSLSKQLLKV 362
>UNIPROTKB|P38935 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0006412
"translation" evidence=NAS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000049 "tRNA binding" evidence=IDA] [GO:0032797
"SMN complex" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0030424 "axon" evidence=ISS] [GO:0030426 "growth
cone" evidence=ISS] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0003697
"single-stranded DNA binding" evidence=TAS] [GO:0006260 "DNA
replication" evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006310 "DNA recombination" evidence=TAS] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0006412
GO:GO:0006260 GO:GO:0008219 GO:GO:0030424 GO:GO:0008270
GO:GO:0006281 GO:GO:0051260 GO:GO:0006351 GO:GO:0043022
GO:GO:0000122 GO:GO:0030426 GO:GO:0006310 GO:GO:0003697
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Orphanet:98920 EMBL:AP000808 Gene3D:4.10.1110.10 GO:GO:0032575
EMBL:L14754 EMBL:L24544 EMBL:BC025299 EMBL:M64979 IPI:IPI00009379
PIR:A47500 RefSeq:NP_002171.2 UniGene:Hs.503048 PDB:1MSZ PDB:2LRR
PDB:4B3F PDB:4B3G PDBsum:1MSZ PDBsum:2LRR PDBsum:4B3F PDBsum:4B3G
ProteinModelPortal:P38935 SMR:P38935 IntAct:P38935 STRING:P38935
PhosphoSite:P38935 DMDM:229462778 PaxDb:P38935 PRIDE:P38935
Ensembl:ENST00000255078 GeneID:3508 KEGG:hsa:3508 UCSC:uc001ook.1
CTD:3508 GeneCards:GC11P068671 H-InvDB:HIX0009884
H-InvDB:HIX0171377 HGNC:HGNC:5542 MIM:600502 MIM:604320
neXtProt:NX_P38935 PharmGKB:PA29731 HOVERGEN:HBG077019
InParanoid:P38935 OMA:HARQRIS OrthoDB:EOG4GHZNJ PhylomeDB:P38935
EvolutionaryTrace:P38935 GenomeRNAi:3508 NextBio:13764
ArrayExpress:P38935 Bgee:P38935 CleanEx:HS_IGHMBP2
Genevestigator:P38935 GermOnline:ENSG00000132740
PANTHER:PTHR10887:SF23 Uniprot:P38935
Length = 993
Score = 385 (140.6 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 120/392 (30%), Positives = 198/392 (50%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R S + + +D + +K K
Sbjct: 254 RLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDK 313
Query: 1015 FVRIG-RHEV--VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT--NPL--LT 1067
+ R+E+ + KE+++ +AM +E L VV T G + PL L
Sbjct: 314 REKSNFRNEIKLLRKELKEREEAAM----LES----LTSANVVLATNTGASADGPLKLLP 365
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL R
Sbjct: 366 ESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMER 425
Query: 1128 LSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+EE+ + + L QYRM Q IM ++ +Y +L+ S +A ++ DL +
Sbjct: 426 LAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSS-VARHLLR--DLPGVAATE 482
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ + P++ V+T +E + D Q+ NP E L++ Q LV + +DI ++
Sbjct: 483 ETGV----PLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVV 538
Query: 1245 TPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+ R L +
Sbjct: 539 SPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDR 595
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 596 RINVAVTRARRHVAVICDSRTVNNHAFLKTLV 627
Score = 160 (61.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 40/114 (35%), Positives = 66/114 (57%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N AVDNL
Sbjct: 192 LDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNL 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVKV 1053
+ +L +R+G + + IQ+H L A+ S V +I+K +DQV V
Sbjct: 252 VERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFV 305
Score = 50 (22.7 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
Identities = 13/49 (26%), Positives = 29/49 (59%)
Query: 813 AAIPTKDMDCTLRSGDYV-ILSTESDRLAVASGLITEISRFHVSVSFSK 860
AA+P+ + SGD V + ++ +A+G++T +++ V+V+F +
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE 120
>FB|FBgn0030354 [details] [associations]
symbol:Upf1 "Upf1" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS;IMP;NAS] [GO:0005737 "cytoplasm"
evidence=IEA;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0035195 "gene silencing by miRNA" evidence=IMP] [GO:0071456
"cellular response to hypoxia" evidence=IMP] [GO:0035145 "exon-exon
junction complex" evidence=IDA] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 EMBL:AE014298 GO:GO:0008270 GO:GO:0071456
GO:GO:0004386 eggNOG:COG1112 GeneTree:ENSGT00550000074391 KO:K14326
OMA:MFYEGSL EMBL:AY061379 RefSeq:NP_572767.1 UniGene:Dm.3617
ProteinModelPortal:Q9VYS3 SMR:Q9VYS3 STRING:Q9VYS3 PaxDb:Q9VYS3
PRIDE:Q9VYS3 EnsemblMetazoa:FBtr0073596 GeneID:32153
KEGG:dme:Dmel_CG1559 UCSC:CG1559-RA CTD:5976 FlyBase:FBgn0030354
InParanoid:Q9VYS3 OrthoDB:EOG476HF1 PhylomeDB:Q9VYS3
GenomeRNAi:32153 NextBio:777131 Bgee:Q9VYS3 GermOnline:CG1559
Uniprot:Q9VYS3
Length = 1180
Score = 331 (121.6 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 104/309 (33%), Positives = 156/309 (50%)
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
N+ E + L+ V+ TC+G + L+ KF ++DE+ Q+T P + P++ +K
Sbjct: 578 NLKRAAE-NQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVPVVLGAK 636
Query: 1097 -FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
+LVGDH QL P+V +A G+ SLF RL + L+ QYRM + + +
Sbjct: 637 QLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPELSQFPSN 695
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y L G + ++K+ D PW + P RP+ F+ T L
Sbjct: 696 FFYEGSLQNGVCA-EDRRLKL-DF----PWPQ----PERPMFFLVTQGQEEIAGSGTSFL 745
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSLSVSSVEIH 1266
N EA + KIT +K I+ + IGIITPY Q A L++ HS +EI
Sbjct: 746 NR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHSRLYQEIEIA 804
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
++D +QGR+KD I++S VRS+E L D R+NVALTRAK +I+VG+ + L+K
Sbjct: 805 SVDAFQGREKDIIIMSCVRSNERQG---IGFLNDPRRLNVALTRAKFGIIIVGNPKVLAK 861
Query: 1327 VPLLKLLIN 1335
L L+N
Sbjct: 862 QQLWNHLLN 870
Score = 107 (42.7 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 36/113 (31%), Positives = 57/113 (50%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G ++L+ + +N+AVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQ 510
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK 1052
L K+ ++ VR+ E + + L N+ + E+KK L Q+K
Sbjct: 511 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKK-LQQLK 562
>UNIPROTKB|F1RY71 [details] [associations]
symbol:IGHMBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051260 "protein homooligomerization" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0032797 "SMN complex" evidence=IEA] [GO:0032575 "ATP-dependent
5'-3' RNA helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000058
InterPro:IPR001374 InterPro:IPR003593 InterPro:IPR004483
InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039
PROSITE:PS51061 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0051260 GO:GO:0043022 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043141
GO:GO:0032797 GeneTree:ENSGT00700000104572 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:CU694814 RefSeq:XP_003122472.2
Ensembl:ENSSSCT00000014076 GeneID:100520173 KEGG:ssc:100520173
Uniprot:F1RY71
Length = 987
Score = 378 (138.1 bits), Expect = 7.3e-31, P = 7.3e-31
Identities = 123/390 (31%), Positives = 194/390 (49%)
Query: 966 LGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK-SQSIDFVRIGRHEV- 1023
LG P S H++ A+L R + + +D +L K K +Q R E+
Sbjct: 262 LGHPARLLESIQQHSLDAVLARSDGARVVADIRRDIDQVLGKTKKTQDKREKSHFRDEIK 321
Query: 1024 -VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDKKFDVCIMDE 1078
+ KE+++ +AM +E L +VV T G ++ PL L D FDV ++DE
Sbjct: 322 LLRKELKEREEAAM----LES----LTAARVVLATNAGASSDGPLKLLPDGHFDVVVIDE 373
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-S 1137
Q PL+ A K +L GDH QLPP + S +A G+ +SL RL EE +
Sbjct: 374 CAQALEASCWVPLLKARKCILAGDHKQLPPTIISHKAALAGLALSLMERLVEERGAGVLR 433
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L QYRM Q I + ++ +Y RL+ + +A ++ DL + + + P++
Sbjct: 434 MLTVQYRMHQAIAQWASEALYHGRLTAHAS-VAGHLLR--DLPGVAATEETGI----PLL 486
Query: 1198 FVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
V+T +E + D Q+ NP E L+ Q LV + D+ +ITPYN Q +L+R
Sbjct: 487 LVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGDVAVITPYNLQVDLLR 546
Query: 1256 HSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + RINVA+TRA++
Sbjct: 547 QSLAQRHPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVAVTRARR 603
Query: 1314 KLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
+ +V RT+S LK L+ E +
Sbjct: 604 HVAVVCDSRTVSNHAFLKTLVAYFAEHGEV 633
Score = 167 (63.8 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 66/234 (28%), Positives = 115/234 (49%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSF--SKPLRLP-GRNSSSDADSLLHEVWR 882
SGD V L E +LA +G++T I++ V+V+ S +L R S L ++V
Sbjct: 85 SGDIVGLYDEDSQLA--TGVLTRITQKLVTVALDASHDFQLSLDRERSYRLLKLANDVTY 142
Query: 883 IDKDEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
+ +T+ + +Y+ ++ AP S S P L++
Sbjct: 143 KRLKKALTT--LQKYHSGPASALI-------EVLFGASAP-----SPASDIPPLTFY--N 186
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + +G+ +L + +N AVD
Sbjct: 187 TALDASQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGSKVLCCAPSNVAVD 246
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV 1051
NL+ +L VR+G + + IQ+H L A+ S V +I++ +DQV
Sbjct: 247 NLVERLARWKQRIVRLGHPARLLESIQQHSLDAVLARSDGARVVADIRRDIDQV 300
>DICTYBASE|DDB_G0268924 [details] [associations]
symbol:DDB_G0268924 "Helicase SEN1" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268924
GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112
ProtClustDB:CLSZ2429765 RefSeq:XP_646844.2
ProteinModelPortal:Q55F26 EnsemblProtists:DDB0202279 GeneID:8616527
KEGG:ddi:DDB_G0268924 InParanoid:Q55F26 Uniprot:Q55F26
Length = 1772
Score = 396 (144.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 134/414 (32%), Positives = 205/414 (49%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--I 991
P+L + LN Q +I L+ K LI G PGTGKT+T+ + + LL I
Sbjct: 1232 PSLLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPEFKI 1291
Query: 992 LLTSYTNSAVDNL--------LIKLKSQSI--DFVRIGRHEVVHKEIQKHCLSAMNINSV 1041
L+ ++++VD + LI L + + VRIG+ E + + H +S N +
Sbjct: 1292 LVCGPSHASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDC--HSISIFN-KTQ 1348
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFAS--KFV 1098
E + + +V T G + + + + D+ ++DE+ Q+T P S+ PL + K +
Sbjct: 1349 REKSDSIYRASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLI 1408
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGD QLPP + STE+ ENG+ ISLF RLS+ P + L QYRM I + Y
Sbjct: 1409 LVGDPLQLPPTIFSTESAENGLNISLFERLSKVLP--VEMLHVQYRMHPTISRFPSNQFY 1466
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
DRL G N K V + + +K P+ F D++ + E ++L N
Sbjct: 1467 RDRLLDGD----NVKSLVYNQHNFHSDIKYG-----PIRFY--DVIDSKEESGKRSLKNK 1515
Query: 1219 VEACLIAKITQELVKNEIEGK--DIGIITPYNSQANLIRHSLSVSS----VEIHTIDKYQ 1272
+E ++ + ++LV++ E K GIITPY Q + I+ + +E TID +Q
Sbjct: 1516 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQ 1575
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
G +KD I++S VRS L D RINVALTRAK L ++G+ + L K
Sbjct: 1576 GSEKDIIILSCVRSER------IGFLSDRRRINVALTRAKFGLFVIGNSKLLKK 1623
Score = 51 (23.0 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 33 TQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQ---SALENT 89
T ++ ++ P + + S+ +P P P+++ P+ K PQ S
Sbjct: 652 TTTTTTTTTTTTTTTTPTTTTLPSLPAPINPG-----KPNEAQPTIKQIPQKIASTKSVI 706
Query: 90 PPDNILPIDDETNSTHHS 107
PD++ P T +T H+
Sbjct: 707 EPDSLSPTTTTTTATTHT 724
Score = 44 (20.5 bits), Expect = 7.9e-30, Sum P(3) = 7.9e-30
Identities = 19/83 (22%), Positives = 36/83 (43%)
Query: 33 TQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPD 92
T++ SKN+ S NP + S ++ N + + ++S + N+ + +N +
Sbjct: 7 TEDESKNLSPSLSLINPTQSELSSTNTINNNNNNNNNSNNNSNNNNNNNDDNNDDNNNNN 66
Query: 93 NILPIDDETNSTHHSPEISKRFK 115
I I E N+ E K+ K
Sbjct: 67 LIKLIFKECNNPKKQLETIKQLK 89
Score = 41 (19.5 bits), Expect = 1.5e-30, Sum P(3) = 1.5e-30
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 141 NERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPKAINRSLTTGRKRVN 200
+ERL +SK + E +++ N L N S P+P+P + TT + N
Sbjct: 910 SERLTLISKLLFNEIYQLIKNEKVLI---------NSSSTPTPTPTTTPTTTTTTTTKSN 960
Score = 37 (18.1 bits), Expect = 2.0e-29, Sum P(3) = 2.0e-29
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 499 KEIPTMKFLE-EYARLV--LQKNIESLYACGVNENDIHKTLVEAIPKML 544
K++ T+K L+ ++ V L+ IE+L E+D TL+E + K L
Sbjct: 80 KQLETIKQLKVQFPTCVDQLEFIIEAL------EDDFFTTLIEKLKKKL 122
>UNIPROTKB|Q6ZU11 [details] [associations]
symbol:Q6ZU11 "Uncharacterized protein FLJ44066"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0016021 GO:GO:0008270
eggNOG:COG1112 UniGene:Hs.713663 EMBL:AK126054 EMBL:AL137700
IPI:IPI00300207 IPI:IPI00880006 PIR:T46441 RefSeq:NP_060862.3
UniGene:Hs.380346 ProteinModelPortal:Q6ZU11 SMR:Q6ZU11
PhosphoSite:Q6ZU11 DMDM:74711848 PaxDb:Q6ZU11 PRIDE:Q6ZU11
GeneID:55345 KEGG:hsa:55345 CTD:55345 HPA:HPA030706
neXtProt:NX_Q6ZU11 PharmGKB:PA144596502 HOGENOM:HOG000155510
InParanoid:Q6ZU11 PhylomeDB:Q6ZU11 GenomeRNAi:55345 NextBio:59679
ArrayExpress:Q6ZU11 Bgee:Q6ZU11 Genevestigator:Q6ZU11
Uniprot:Q6ZU11
Length = 926
Score = 345 (126.5 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 108/308 (35%), Positives = 155/308 (50%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM-F-ASKFVLVGDHYQ 1105
L QV+VV VTC P + D KF V ++DE Q T P SL P+ F K +LVGD Q
Sbjct: 602 LKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQ 661
Query: 1106 LPPLVQSTEA-RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
LPP +Q ++A ENG+E +LF RL + I L++QYR I ++N L Y L
Sbjct: 662 LPPTIQGSDAAHENGLEQTLFDRLCLMGHKPI-LLRTQYRCHPAISAIANDLFYKGALMN 720
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
G EI + S WL C F N L E +D+ + +N EA
Sbjct: 721 GVTEI--------ERSPLLEWLPTL---C----FYNVKGLEQIE-RDN-SFHNVAEATFT 763
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDK 1276
K+ Q L+ + I G IG+IT Y SQ + H LS + +V++ T+D +QG +K
Sbjct: 764 LKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEK 823
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
+ I++S VR+ + + R+NVALTR K+ L++VG+ L K L +I
Sbjct: 824 EIIILSCVRTRQ------VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVIQH 877
Query: 1337 V-GEQSGI 1343
G + G+
Sbjct: 878 CEGREDGL 885
Score = 81 (33.6 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
+L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K+
Sbjct: 513 LLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLKE 569
>DICTYBASE|DDB_G0288923 [details] [associations]
symbol:upf1 "regulator of nonsense transcripts 1"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;IC] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR018999 Pfam:PF09416 dictyBase:DDB_G0288923
GO:GO:0005524 GO:GO:0005737 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AAFI02000126
GenomeReviews:CM000154_GR GO:GO:0003676 eggNOG:COG1112
GO:GO:0004004 KO:K14326 RefSeq:XP_636490.1
ProteinModelPortal:Q54I89 SMR:Q54I89 STRING:Q54I89
EnsemblProtists:DDB0233746 GeneID:8626873 KEGG:ddi:DDB_G0288923
InParanoid:Q54I89 Uniprot:Q54I89
Length = 1331
Score = 319 (117.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 103/302 (34%), Positives = 156/302 (51%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQL 1106
L + V+ TC+G +P L+ +F ++DE+ Q + P L PLM +K +LVGDH QL
Sbjct: 677 LRKADVICATCVGAGDPRLSQFRFPHILIDESTQASEPECLIPLMMGAKQVILVGDHRQL 736
Query: 1107 PPLVQSTEARENGMEISLFRRLSE--EHPQAISALQSQYRMCQGIMEL-SNALIYGDRLS 1163
P++ + + G+ SLF RL HP+ ++ QYRM + E SN G +S
Sbjct: 737 GPVLLCKKVVDAGLSQSLFERLISLGHHPERLTI---QYRMHPSLTEFPSNTSYEGQLVS 793
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
E+++ D S PW + P P+ F N + +N EA +
Sbjct: 794 ----ELSHTD---RDSQSKFPWPQ----PKDPMFFFNCTGSEEISSSGTSFINT-TEASI 841
Query: 1224 IAKI-TQELVKNEIEGKDIGIITPYNSQ-ANLIRH-------SLSV-SSVEIHTIDKYQG 1273
KI T+ L + G+ IGIITPY Q A + H +L + S+E+ ++D +QG
Sbjct: 842 CEKIVTKFLELGSLPGQ-IGIITPYEGQRAYITSHMQKSGKLNLELYKSIEVASVDSFQG 900
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
R+KD I++S VRS++ L D R+NVALTRA+ LI++G+ + LSK PL L
Sbjct: 901 REKDYIILSCVRSNDYQG---IGFLQDPRRLNVALTRARFGLIILGNAKVLSKDPLWNSL 957
Query: 1334 IN 1335
I+
Sbjct: 958 IS 959
Score = 107 (42.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 38/116 (32%), Positives = 59/116 (50%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKT---STMVHAVKALLMRGASILLTSYTNSAV 1001
LN+ Q A+ KVLTA +LI G PGTGKT S ++H + + +L+ + +N A+
Sbjct: 537 LNESQISAVNKVLTAP-LSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAI 595
Query: 1002 DNLLIKLKSQSIDFVRIG---RHEV--------VHKEIQKHCLSAMNINSVEEIKK 1046
D L KL + VR+ R EV +HK++ K L M + +++K
Sbjct: 596 DQLTGKLHEIGLKVVRLSSKLREEVASPVEHLTLHKQVYK--LDQMGDGELGKLRK 649
>RGD|68325 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2" species:10116
"Rattus norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO;ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA;ISO;IDA] [GO:0003723 "RNA binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISO;ISS] [GO:0005634
"nucleus" evidence=IEA;ISO;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISO;ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008134 "transcription factor binding"
evidence=IEA;ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation" evidence=ISO]
[GO:0030424 "axon" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA;ISO] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=IEA;ISO;ISS] [GO:0032797 "SMN complex"
evidence=IEA;ISO] [GO:0043022 "ribosome binding"
evidence=IEA;ISO;ISS] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0043621 "protein self-association"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=IEA;ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 RGD:68325 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0030424 GO:GO:0001078 GO:GO:0008270 GO:GO:0051260
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0043141
GO:GO:0032797 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508 OrthoDB:EOG4GHZNJ
PANTHER:PTHR10887:SF23 EMBL:AF199411 IPI:IPI00190206
RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 365 (133.5 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 119/399 (29%), Positives = 191/399 (47%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + K K
Sbjct: 253 RLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQDK 312
Query: 1015 FVRIG-RHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDK 1069
+ R+E+ K ++K + I + L VV T G + PL L +
Sbjct: 313 REKSNFRNEI--KLLRKE----LKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPED 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL RL+
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLA 426
Query: 1130 EEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H A+ L QYRM Q I ++ +Y +L+ +A +K DL P + +
Sbjct: 427 EKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTA-HPSVAGHLLK--DL----PGVAD 479
Query: 1189 ALNPCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I P
Sbjct: 480 TEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
Score = 157 (60.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 39/123 (31%), Positives = 68/123 (55%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P L++ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L
Sbjct: 182 PPLTFY--NTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC 239
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRL 1048
+ +N AVDNL+ +L +R+G + + +Q+H L A+ N V +I++ +
Sbjct: 240 CAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDI 299
Query: 1049 DQV 1051
DQV
Sbjct: 300 DQV 302
>UNIPROTKB|Q9EQN5 [details] [associations]
symbol:Ighmbp2 "DNA-binding protein SMUBP-2" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154 SMART:SM00382
SMART:SM00393 RGD:68325 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0030424 GO:GO:0001078
GO:GO:0008270 GO:GO:0051260 GO:GO:0043621 GO:GO:0043022
GO:GO:0030529 GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0043141 GO:GO:0032797 HOGENOM:HOG000185831
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 CTD:3508
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:AF199411
IPI:IPI00190206 RefSeq:NP_113774.1 UniGene:Rn.23984 HSSP:P38935
ProteinModelPortal:Q9EQN5 SMR:Q9EQN5 STRING:Q9EQN5 PRIDE:Q9EQN5
GeneID:29532 KEGG:rno:29532 UCSC:RGD:68325 InParanoid:Q9EQN5
NextBio:609508 ArrayExpress:Q9EQN5 Genevestigator:Q9EQN5
Uniprot:Q9EQN5
Length = 988
Score = 365 (133.5 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 119/399 (29%), Positives = 191/399 (47%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + K K
Sbjct: 253 RLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQDK 312
Query: 1015 FVRIG-RHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDK 1069
+ R+E+ K ++K + I + L VV T G + PL L +
Sbjct: 313 REKSNFRNEI--KLLRKE----LKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLPED 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL RL+
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMERLA 426
Query: 1130 EEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H A+ L QYRM Q I ++ +Y +L+ +A +K DL P + +
Sbjct: 427 EKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTA-HPSVAGHLLK--DL----PGVAD 479
Query: 1189 ALNPCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I P
Sbjct: 480 TEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
Score = 157 (60.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 39/123 (31%), Positives = 68/123 (55%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P L++ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L
Sbjct: 182 PPLTFY--NTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC 239
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRL 1048
+ +N AVDNL+ +L +R+G + + +Q+H L A+ N V +I++ +
Sbjct: 240 CAPSNIAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDI 299
Query: 1049 DQV 1051
DQV
Sbjct: 300 DQV 302
>CGD|CAL0003666 [details] [associations]
symbol:NAM7 species:5476 "Candida albicans" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IEA] [GO:0008298 "intracellular mRNA localization"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
CGD:CAL0003666 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0003677 GO:GO:0008270 GO:GO:0004386 eggNOG:COG1112
InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000063
EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1 RefSeq:XP_716838.1
ProteinModelPortal:Q5A507 SMR:Q5A507 STRING:Q5A507 GeneID:3641489
GeneID:3641540 KEGG:cal:CaO19.8554 KEGG:cal:CaO19.939
Uniprot:Q5A507
Length = 1019
Score = 311 (114.5 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 99/303 (32%), Positives = 161/303 (53%)
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHY 1104
K L++ +VV TC+G + L+ +F ++DE+ Q + P L P++ +K +LVGDH
Sbjct: 574 KVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQ 633
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QL P++ +A + G++ SLF RL I L+ QYRM + E + + Y L
Sbjct: 634 QLGPVILDKKAADAGLKQSLFERLVFLGHVPIR-LEVQYRMHPCLSEFPSNMFYEGSLQN 692
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
G + + + + S PW ++ P++F A + LN VEA +
Sbjct: 693 G---VTSDDRLIEE--STFPW--PVIDT--PMMFWANYGREELSASGNSYLNR-VEAMNV 742
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS-----------VEIHTIDKYQG 1273
KI +L K+ I+ + IG+ITPY Q + +SV+S VEI ++D +QG
Sbjct: 743 EKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQG 802
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK-L 1332
R+KD I++S VR++++ + L D R+NVALTRAK L+++G+ R+L + L L
Sbjct: 803 REKDFIILSCVRANDSQ---SIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHL 859
Query: 1333 LIN 1335
LI+
Sbjct: 860 LIH 862
Score = 107 (42.7 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 41/140 (29%), Positives = 67/140 (47%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + IL+ + +N AVD+
Sbjct: 441 LNVSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDH 499
Query: 1004 LLIKLKSQSIDFVRIGR--HEVVHKEIQKHCL-SAMNINSVEEIKKRLDQVKVVAVTCLG 1060
L KL ++ VR+ E V + L + +N N+ E+KK + V +
Sbjct: 500 LAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLKNQVGELSVA 559
Query: 1061 ITNPLLT-DKKFDVCIMDEA 1079
TN L + ++ ++++A
Sbjct: 560 DTNNYLKLSRSSEMKVLNKA 579
Score = 52 (23.4 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 133 VTWNISPVNERLLAVSKQMPPENIRVLANSSRLN-SLTIHQCSHNKSKQPSPSP 185
++W P E L ++ + P+ I L RLN + TI+ +NK + P
Sbjct: 206 LSWLAPPPTEDDLIEARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLP 259
Score = 50 (22.7 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 502 PTMKFLEEYARLVLQKNIESLYA-------CGVNENDIHKTLV-EAIPKMLNWIILFKDS 553
PT L E ARL+ + I L A +N+ D +K E +P ++ + F+
Sbjct: 213 PTEDDLIE-ARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLPILMRYNDAFQYQ 271
Query: 554 QDLNTPTVDFGSDGLKKLKISEVTDIEEMAWA 585
+ P V D K LK S+ + ++ WA
Sbjct: 272 RSFG-PLVKLEGDYDKNLKESQALEHIQVKWA 302
>UNIPROTKB|Q5A507 [details] [associations]
symbol:NAM7 "Putative uncharacterized protein NAM7"
species:237561 "Candida albicans SC5314" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISS] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 CGD:CAL0003666 GO:GO:0005524
GO:GO:0005737 GO:GO:0000184 GO:GO:0003677 GO:GO:0008270
GO:GO:0004386 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
EMBL:AACQ01000063 EMBL:AACQ01000062 KO:K14326 RefSeq:XP_716778.1
RefSeq:XP_716838.1 ProteinModelPortal:Q5A507 SMR:Q5A507
STRING:Q5A507 GeneID:3641489 GeneID:3641540 KEGG:cal:CaO19.8554
KEGG:cal:CaO19.939 Uniprot:Q5A507
Length = 1019
Score = 311 (114.5 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 99/303 (32%), Positives = 161/303 (53%)
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHY 1104
K L++ +VV TC+G + L+ +F ++DE+ Q + P L P++ +K +LVGDH
Sbjct: 574 KVLNKAEVVCCTCVGAADRRLSQFRFKTVLIDESTQASEPEVLIPIVKGAKQVILVGDHQ 633
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QL P++ +A + G++ SLF RL I L+ QYRM + E + + Y L
Sbjct: 634 QLGPVILDKKAADAGLKQSLFERLVFLGHVPIR-LEVQYRMHPCLSEFPSNMFYEGSLQN 692
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
G + + + + S PW ++ P++F A + LN VEA +
Sbjct: 693 G---VTSDDRLIEE--STFPW--PVIDT--PMMFWANYGREELSASGNSYLNR-VEAMNV 742
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS-----------VEIHTIDKYQG 1273
KI +L K+ I+ + IG+ITPY Q + +SV+S VEI ++D +QG
Sbjct: 743 EKIITKLFKDGIKPEQIGVITPYEGQRAYLVQFMSVNSTLLDKRDQYLNVEITSVDAFQG 802
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK-L 1332
R+KD I++S VR++++ + L D R+NVALTRAK L+++G+ R+L + L L
Sbjct: 803 REKDFIILSCVRANDSQ---SIGFLSDPRRLNVALTRAKYGLVILGNPRSLCRNRLWNHL 859
Query: 1333 LIN 1335
LI+
Sbjct: 860 LIH 862
Score = 107 (42.7 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 41/140 (29%), Positives = 67/140 (47%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + IL+ + +N AVD+
Sbjct: 441 LNVSQTNAVRTVLQ-RPLSLIQGPPGTGKTVTSATIIYHLSKLNKQKILVCAPSNVAVDH 499
Query: 1004 LLIKLKSQSIDFVRIGR--HEVVHKEIQKHCL-SAMNINSVEEIKKRLDQVKVVAVTCLG 1060
L KL ++ VR+ E V + L + +N N+ E+KK + V +
Sbjct: 500 LAAKLDLLGLNVVRLTAKSREDVESSVSHLALHNLVNSNAKGELKKLIKLKNQVGELSVA 559
Query: 1061 ITNPLLT-DKKFDVCIMDEA 1079
TN L + ++ ++++A
Sbjct: 560 DTNNYLKLSRSSEMKVLNKA 579
Score = 52 (23.4 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 133 VTWNISPVNERLLAVSKQMPPENIRVLANSSRLN-SLTIHQCSHNKSKQPSPSP 185
++W P E L ++ + P+ I L RLN + TI+ +NK + P
Sbjct: 206 LSWLAPPPTEDDLIEARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLP 259
Score = 50 (22.7 bits), Expect = 3.1e-29, Sum P(3) = 3.1e-29
Identities = 25/92 (27%), Positives = 40/92 (43%)
Query: 502 PTMKFLEEYARLVLQKNIESLYA-------CGVNENDIHKTLV-EAIPKMLNWIILFKDS 553
PT L E ARL+ + I L A +N+ D +K E +P ++ + F+
Sbjct: 213 PTEDDLIE-ARLITPQQISKLEAQWRLNRAATINDIDNNKEAEQEVLPILMRYNDAFQYQ 271
Query: 554 QDLNTPTVDFGSDGLKKLKISEVTDIEEMAWA 585
+ P V D K LK S+ + ++ WA
Sbjct: 272 RSFG-PLVKLEGDYDKNLKESQALEHIQVKWA 302
>UNIPROTKB|G5EA02 [details] [associations]
symbol:C4orf21 "Uncharacterized protein C4orf21"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
EMBL:CH471057 InterPro:IPR018838 Pfam:PF10382 UniGene:Hs.713663
RefSeq:NP_060862.3 UniGene:Hs.380346 GeneID:55345 KEGG:hsa:55345
CTD:55345 GenomeRNAi:55345 NextBio:59679 EMBL:AC106864
EMBL:AC023886 PRIDE:G5EA02 Ensembl:ENST00000505019 HGNC:HGNC:25654
OMA:NTYESSG ArrayExpress:G5EA02 Bgee:G5EA02 Uniprot:G5EA02
Length = 2104
Score = 345 (126.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 108/308 (35%), Positives = 155/308 (50%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM-F-ASKFVLVGDHYQ 1105
L QV+VV VTC P + D KF V ++DE Q T P SL P+ F K +LVGD Q
Sbjct: 1780 LKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQ 1839
Query: 1106 LPPLVQSTEA-RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
LPP +Q ++A ENG+E +LF RL + I L++QYR I ++N L Y L
Sbjct: 1840 LPPTIQGSDAAHENGLEQTLFDRLCLMGHKPI-LLRTQYRCHPAISAIANDLFYKGALMN 1898
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
G EI + S WL C F N L E +D+ + +N EA
Sbjct: 1899 GVTEI--------ERSPLLEWLPTL---C----FYNVKGLEQIE-RDN-SFHNVAEATFT 1941
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDK 1276
K+ Q L+ + I G IG+IT Y SQ + H LS + +V++ T+D +QG +K
Sbjct: 1942 LKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEK 2001
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
+ I++S VR+ + + R+NVALTR K+ L++VG+ L K L +I
Sbjct: 2002 EIIILSCVRTRQ------VGFIDSEKRMNVALTRGKRHLLIVGNLACLRKNQLWGRVIQH 2055
Query: 1337 V-GEQSGI 1343
G + G+
Sbjct: 2056 CEGREDGL 2063
Score = 81 (33.6 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
+L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K+
Sbjct: 1691 LLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLKE 1747
Score = 61 (26.5 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 31/113 (27%), Positives = 49/113 (43%)
Query: 91 PDNILPIDD-ETNSTHHSPEISKRFKFSPEMLIK----LSQYDGGDEVTWNI---SPVNE 142
P+NI+ + E N+ S S F+ +PE+L + S + G++++ ++ PV
Sbjct: 176 PENIVTYKNRERNAMDFSSVFSPSFQINPEVLCEENYFCSPVNSGNKLSDSLLTNEPVKR 235
Query: 143 RLLAVSKQMPPENIR----VLA-----NSSRLNSLTIHQCSHNKSKQPSPSPK 186
LA +NIR +LA +SS L H KQP S K
Sbjct: 236 DSLASHYSGVSQNIRSKAQILALLKSESSSSCEELNSEMTEHFPQKQPQGSLK 288
Score = 43 (20.2 bits), Expect = 2.4e-29, Sum P(4) = 2.4e-29
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 493 FQAGLMKEIPTMKFLEEYARLVLQKNIESLY----ACGVNENDIHKTLVE 538
F G+ K T K +EEY+ + N ES G N+ D +K + E
Sbjct: 621 FDMGICKTENTGKEIEEYSDTL--SNFESFKWTDAVYGDNKEDANKPIQE 668
>UNIPROTKB|Q60560 [details] [associations]
symbol:IGHMBP2 "DNA-binding protein SMUBP-2" species:10036
"Mesocricetus auratus" [GO:0000049 "tRNA binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA helicase
activity" evidence=ISS] [GO:0043022 "ribosome binding"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0043621 "protein self-association"
evidence=ISS] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 Pfam:PF01428 PROSITE:PS51039 PROSITE:PS51061
SMART:SM00154 SMART:SM00382 SMART:SM00393 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0030424 GO:GO:0008270 GO:GO:0006351
GO:GO:0043621 GO:GO:0043022 GO:GO:0030529 GO:GO:0000049
InterPro:IPR014001 SMART:SM00487 GO:GO:0043141 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
PANTHER:PTHR10887:SF23 EMBL:L15625 PIR:T48845
ProteinModelPortal:Q60560 SMR:Q60560 Uniprot:Q60560
Length = 989
Score = 363 (132.8 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 119/399 (29%), Positives = 191/399 (47%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + K K
Sbjct: 253 RLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDIDQVFGKNKKTQDK 312
Query: 1015 FVRIG-RHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDK 1069
+ R+E+ K ++K + I + L VV T G ++ PL L +
Sbjct: 313 REKSNFRNEI--KLLRKE----LKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEN 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL RL
Sbjct: 367 HFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLMERLV 426
Query: 1130 EEHPQ-AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H A+ L QYRM Q I ++ +Y +L+ +A +K DL P + +
Sbjct: 427 EKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLTA-HPSVAGHLLK--DL----PGVAD 479
Query: 1189 ALNPCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L + +D Q+ NP E L+ Q LV + DI +I P
Sbjct: 480 TEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ RT++ LK L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEV 635
Score = 157 (60.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 60/231 (25%), Positives = 106/231 (45%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDK 885
SGD V L ++ +A+G++T I++ V+V+F + + + D +R+ K
Sbjct: 85 SGDIVGLYDANESSQLATGVLTRITQKSVTVAFDE-----SHDFQLNLDR--ENTYRLLK 137
Query: 886 DEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSL 945
+ + R +I L S S ++ P ++ +L
Sbjct: 138 --LANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGG--SSPSPTTEIPPFTFY--NTAL 191
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G IL + +N AVDNL+
Sbjct: 192 DPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPSNVAVDNLV 251
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV 1051
+L +R+G + + Q+H L A+ N V +I+K +DQV
Sbjct: 252 ERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDIDQV 302
>UNIPROTKB|E1BY42 [details] [associations]
symbol:E1BY42 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IEA] [GO:0032797 "SMN complex"
evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
InterPro:IPR000058 InterPro:IPR001374 InterPro:IPR003593
InterPro:IPR004483 InterPro:IPR026853 Pfam:PF01424 Pfam:PF01428
PROSITE:PS51061 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0008270 GO:GO:0051260
GO:GO:0043022 GO:GO:0000049 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 GO:GO:0032797 GeneTree:ENSGT00700000104572
TIGRFAMs:TIGR00376 Gene3D:4.10.1110.10 GO:GO:0032575 OMA:HARQRIS
PANTHER:PTHR10887:SF23 EMBL:AADN02040052 EMBL:AADN02040053
IPI:IPI00595444 Ensembl:ENSGALT00000006901 Uniprot:E1BY42
Length = 976
Score = 361 (132.1 bits), Expect = 4.9e-29, P = 4.9e-29
Identities = 109/381 (28%), Positives = 183/381 (48%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR---IGR 1020
L LG P H++ A+L R S + + +D K K R +
Sbjct: 259 LRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAFAKSKKAQDKGERGHFLSE 318
Query: 1021 HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDKKFDVCIM 1076
+ + KE+++ +AM L VV T G ++ PL L + FD+ ++
Sbjct: 319 IKALRKELKEREETAMTA--------ALTHASVVLATNTGASSDGPLKLLPENYFDLVVI 370
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ-A 1135
DE Q PL+ A K +L GDH QLPP + S +A G+ +SL R+ E + +
Sbjct: 371 DECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERYGEKV 430
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
+ L QYRM + IM+ +++ +YG RL+ +A +K +C+ +E P
Sbjct: 431 VKMLTVQYRMHEAIMQWASSEMYGGRLTA-HPSVAQHLLKDLPGVTCT---EETTIPLLL 486
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
+ +L E +D Q+ NP E L+ Q LV ++ +D+ ++ PYN Q +++R
Sbjct: 487 IDTAGCGLLEL-EVEDEQSKGNPGEVQLVGLHIQALVDAGVKARDVAVVAPYNLQVDMLR 545
Query: 1256 HSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
L +EI ++D +QGR+K+ +++SFVRS+ R L + RINVA+TRA++
Sbjct: 546 EHLCHRYPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVAVTRARR 602
Query: 1314 KLIMVGSCRTLSKVPLLKLLI 1334
+ ++ RT+ L L+
Sbjct: 603 HVAIICDSRTVGSQAFLGRLL 623
Score = 158 (60.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 38/112 (33%), Positives = 63/112 (56%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SL+ QR A+ L K+ A++ G PGTGKT+T+V + + +G +L + +N AVDN
Sbjct: 187 SLDASQREAVSFSLAQKELAIVHGPPGTGKTTTVVEIILQAVQQGLKVLCCAPSNVAVDN 246
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ 1050
L+ +L +R+G + + IQ+H L A+ S V +++K +DQ
Sbjct: 247 LVERLAGYKARILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQ 298
>UNIPROTKB|F1PCI1 [details] [associations]
symbol:C4orf21 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 OMA:HKLGTNK EMBL:AAEX03016829
Ensembl:ENSCAFT00000018553 Uniprot:F1PCI1
Length = 1024
Score = 329 (120.9 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 110/332 (33%), Positives = 161/332 (48%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
V K I++H L N K L QV+VV VTC P + D KF V ++DE Q T
Sbjct: 685 VRKSIEQHKLGT-N-------KTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQIT 736
Query: 1084 LPVSLGPLM-F-ASKFVLVGDHYQLPPLVQSTEA-RENGMEISLFRRLSEEHPQAISALQ 1140
P SL P+ F K +LVGD QL P +Q ++A ENG+E +LF RL + + L+
Sbjct: 737 EPASLLPIARFECEKLILVGDPKQLSPTIQGSDAAHENGLEQTLFDRLCLMGHKPV-LLR 795
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYR I ++SN L Y L G E + WL C F N
Sbjct: 796 TQYRCHPAISDISNDLFYEGNLVDGISETERGPLL--------EWLPTL---C----FYN 840
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS- 1259
P +D+ + +N EA K+ Q L+ + I G IG+IT Y SQ + H LS
Sbjct: 841 IKG-PEQIERDN-SFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSA 898
Query: 1260 -------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+ +V++ T+D +QG +K+ I++S VR+ + + R+NVALTR +
Sbjct: 899 VDFDNPDIKAVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKRMNVALTRGR 952
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+ L++VG+ L K L +I G + G+
Sbjct: 953 RHLLIVGNLACLRKNRLWGRVIQHCEGRRDGL 984
Score = 82 (33.9 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
+R +L++S TN AVD +L+ L S + FVR+G + K I + L A + N E++
Sbjct: 607 VRPWKLLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPILPYSLHAGSENENEQL 666
Query: 1045 KK 1046
K+
Sbjct: 667 KE 668
>SGD|S000001500 [details] [associations]
symbol:HCS1 "Hexameric DNA polymerase alpha-associated DNA
helicase A" species:4932 "Saccharomyces cerevisiae" [GO:0003677
"DNA binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IDA] [GO:0006273 "lagging
strand elongation" evidence=IC] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0033203 "DNA helicase A
complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR004483
SMART:SM00382 SGD:S000001500 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 EMBL:BK006944 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:X74152 GO:GO:0006273 GO:GO:0043141
HOGENOM:HOG000185831 OrthoDB:EOG444PTN GO:GO:0033203 EMBL:Z28017
PIR:S34700 RefSeq:NP_012908.1 ProteinModelPortal:P34243 SMR:P34243
DIP:DIP-1383N IntAct:P34243 MINT:MINT-399891 STRING:P34243
PaxDb:P34243 EnsemblFungi:YKL017C GeneID:853852 KEGG:sce:YKL017C
CYGD:YKL017c GeneTree:ENSGT00700000104572 OMA:QGGDFPE
SABIO-RK:P34243 NextBio:975085 Genevestigator:P34243
GermOnline:YKL017C TIGRFAMs:TIGR00376 Uniprot:P34243
Length = 683
Score = 288 (106.4 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 84/273 (30%), Positives = 142/273 (52%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFAS----KFVLVGDHYQLPPLVQSTEARE--NGMEISL 1124
FD I+DE Q P PL+ K VL GD+ QLPP +++ + + + +E +L
Sbjct: 389 FDTLIIDEVSQAMEPQCWIPLIAHQNQFHKLVLAGDNKQLPPTIKTEDDKNVIHNLETTL 448
Query: 1125 FRRLSEEHPQA--ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
F R+ + P+ + L QYRM Q IME + +Y +L + +AN ++ + DL +
Sbjct: 449 FDRIIKIFPKRDMVKFLNVQYRMNQKIMEFPSHSMYNGKLLADAT-VAN-RLLI-DLPTV 505
Query: 1183 SPWLKEALNPCR-PVIFVNTDMLPAYEAKDHQTL----NNPVEACLIAKITQELVKNEIE 1237
E + + P+I+ +T E D T+ N E ++ + + L +
Sbjct: 506 DATPSEDDDDTKIPLIWYDTQGDEFQETADEATILGSKYNEGEIAIVKEHIENLRSFNVP 565
Query: 1238 GKDIGIITPYNSQAN----LIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
IG+I+PYN+Q + LI L ++ +EI T+D +QGR+KD I++S VRS+E
Sbjct: 566 ENSIGVISPYNAQVSHLKKLIHDELKLTDIEISTVDGFQGREKDVIILSLVRSNEK---F 622
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L + R+NVA+TR +++L++VG+ L +
Sbjct: 623 EVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQR 655
Score = 114 (45.2 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
Identities = 33/114 (28%), Positives = 62/114 (54%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAV 1001
+LND Q+ AI + D +I G PGTGKT T++ ++ LL++ IL+ +N +V
Sbjct: 207 NLNDSQKTAINFAIN-NDLTIIHGPPGTGKTFTLIELIQQLLIKNPEERILICGPSNISV 265
Query: 1002 DNLLIKLKSQSID--FVRIGRHEVVHKEIQKHCLSAMNINS--VEEIKKRLDQV 1051
D +L +L + +RIG + ++H L ++ + V++I + +D++
Sbjct: 266 DTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLDILSKKNTIVKDISQEIDKL 319
Score = 38 (18.4 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIIL 549
T +E +L+++ E + CG + + L P + N ++L
Sbjct: 236 TFTLIELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLL 282
>UNIPROTKB|E1BG37 [details] [associations]
symbol:E1BG37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR010666 Pfam:PF06839 GO:GO:0008270
GeneTree:ENSGT00550000074391 EMBL:DAAA02016483 IPI:IPI00912094
Ensembl:ENSBTAT00000017567 OMA:HKLGTNK Uniprot:E1BG37
Length = 933
Score = 336 (123.3 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 112/332 (33%), Positives = 162/332 (48%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
V K I++H L N K L QV+VV VTC P + D KF V ++DE Q T
Sbjct: 587 VRKSIEQHKLGT-N-------KTLLKQVRVVGVTCAACPFPCMNDLKFPVVVLDECSQMT 638
Query: 1084 LPVSLGPLM-F-ASKFVLVGDHYQLPPLVQSTEA-RENGMEISLFRRLSEEHPQAISALQ 1140
P SL P+ F K +LVGD QLPP +Q ++A ENG+E +LF RL + I L+
Sbjct: 639 EPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLMGHKPI-LLR 697
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYR I ++N L Y L G E ++ S WL C F N
Sbjct: 698 TQYRCHPTISAIANDLFYEGNLMNGISE--------TERSPLLEWLPTL---C----FYN 742
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS- 1259
L E + + +N EA K+ Q L+ + I G IG+IT Y SQ + H LS
Sbjct: 743 VKGLEQIERGN--SFHNVAEAAFTLKLIQSLIASGIAGSMIGVITLYKSQMYKLCHLLSA 800
Query: 1260 -------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+ +V++ T+D +QG +K+ I++S VR+ + + R+NVALTR +
Sbjct: 801 MDFDHPNLKAVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKRMNVALTRGR 854
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+ L++VG+ L K L +I G + G+
Sbjct: 855 RHLLIVGNLACLRKNRLWGRVIQHCEGREGGL 886
Score = 79 (32.9 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
+L++S TN AVD +L+ L S + FVR+G + K + + L A + N E++K+
Sbjct: 514 LLISSSTNVAVDRVLLGLLSLGFEKFVRVGSVRKIAKPVLPYSLYAGSENENEQLKE 570
Score = 43 (20.2 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 34/128 (26%), Positives = 53/128 (41%)
Query: 88 NTPPDNI-LPIDDETNSTHHSPE----ISKRFKFSPEMLIKLSQYDGGDEVTWNISPVNE 142
N P + L + + +S+ +S + +SK F + I S + G S +NE
Sbjct: 281 NEPKSKLYLKLSRKESSSAYSKDDLWVVSKTLDFELDTFIACSTFFGP-------SSINE 333
Query: 143 -RLLAVSKQMP---PENIRVLA----NSS-RLNSL-TIHQCSHNKSKQPSPSPKAINRSL 192
LL + P P N V A N+S L +L I C + + + ++ S
Sbjct: 334 VELLPLKGYFPSNWPTNTVVHALLVCNASTELTTLKNIRDCFNPATLPLTQYLLTMSSST 393
Query: 193 TTGRKRVN 200
TT KRVN
Sbjct: 394 TTSNKRVN 401
Score = 39 (18.8 bits), Expect = 5.2e-28, Sum P(4) = 5.2e-28
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 460 ASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAG 496
A R+SV E K E +I L T++H +F AG
Sbjct: 450 AQMMASRQSV--EEAK--ELAIHTLPITIIHGVFGAG 482
>DICTYBASE|DDB_G0289529 [details] [associations]
symbol:DDB_G0289529 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002934
InterPro:IPR003593 Pfam:PF01909 SMART:SM00382
dictyBase:DDB_G0289529 GO:GO:0005524 EMBL:AAFI02000141
GO:GO:0017111 eggNOG:COG1112 GO:GO:0016779 RefSeq:XP_636183.1
ProteinModelPortal:Q54HF4 EnsemblProtists:DDB0219440 GeneID:8627170
KEGG:ddi:DDB_G0289529 InParanoid:Q54HF4 ProtClustDB:CLSZ2429765
Uniprot:Q54HF4
Length = 1677
Score = 379 (138.5 bits), Expect = 6.7e-28, Sum P(3) = 6.7e-28
Identities = 131/414 (31%), Positives = 202/414 (48%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM--RGASI 991
P L I EK LN+ Q AI L LI G PGTGKT+T+ + + LL + I
Sbjct: 1183 PTLETICKEK-LNESQLNAIKSSLVESGITLIQGPPGTGKTTTINYLLSVLLAIDKKFKI 1241
Query: 992 LLTSYTNSAVDNLL---IK--LKSQSIDF----VRIGRHEVVHKEIQKHCLSAMNINSVE 1042
L+ ++++VD + +K L S F VR GR E + E QK +S N NS
Sbjct: 1242 LVCGPSHASVDEVAKRCLKNLLNSDGQIFKPNMVRTGRKEKISPECQK--ISLKNKNSSR 1299
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFAS--KFVL 1099
I + +V T G + + + D+ ++DE+ Q++ P S+ PL S K +L
Sbjct: 1300 RINL-IKSASIVFSTLAGSGSKAIFENFSPDIVLIDESTQSSEPTSIIPLSLGSVKKLIL 1358
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGD QLPP + S + + G++ISLF RL++ + L +QYRM + + Y
Sbjct: 1359 VGDPVQLPPTIFSKQGADCGLKISLFERLAKSID--VQFLNTQYRMHPVTSKFISEEFYN 1416
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPV 1219
L G + + + ++C + P + F D+ + + +++ N
Sbjct: 1417 GTLKDGEN------VSIDSYNNCKFHFDPSFGPMK--FF---DLPKSNQKVIKKSIMNQD 1465
Query: 1220 EACLIAKITQELVKNEIEGKDI--GIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQ 1272
E + + +EL++ E K + GIITPY Q N I+ L+ S ++ + TID Q
Sbjct: 1466 EIDKVFTLIKELIEKYPECKKLSFGIITPYKLQMNQIKEQLNRSEHHNLNISVSTIDGVQ 1525
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
G +KD I++S VRS E L D RINVALTRAK L ++G+ + L+K
Sbjct: 1526 GSEKDIIIMSCVRSIEK---FGIGFLSDRRRINVALTRAKLGLYVIGTYKVLAK 1576
Score = 45 (20.9 bits), Expect = 6.7e-28, Sum P(3) = 6.7e-28
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 468 SVLDERLKCSERSISALLGTLLHQIFQAGLMKE----IPTMKFLEEYARLVLQKNIESLY 523
+++ + +K S+ LLG LLH + +A L + I + F +Y LVL+ IE +
Sbjct: 39 NLMKDFVKKSKSRRDGLLGKLLHSL-KAMLKNQSNESIKSSIFYNQY--LVLRMVIEFNF 95
Query: 524 AC 525
C
Sbjct: 96 FC 97
Score = 42 (19.8 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 21 TKFGIQHFFDRHTQNSSKNVDV 42
++FGI+ F R+ SK +++
Sbjct: 125 SRFGIKKIFTRNLSEFSKPIEI 146
Score = 39 (18.8 bits), Expect = 9.8e-27, Sum P(4) = 9.8e-27
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 484 LLGTLLHQIFQAGLMKEIPTMKFLEEYAR 512
L T L+ I + L +P ++F+E+ ++
Sbjct: 420 LESTKLYTIIEKRLSATVPIIRFVEKSSK 448
Score = 38 (18.4 bits), Expect = 6.7e-28, Sum P(3) = 6.7e-28
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 566 DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE 603
+G K+K++E ++ +++ K+ +I R K+E
Sbjct: 1034 EGFDKIKMNEAIEVVQISRQTKFITVELIIHGNRNKLE 1071
Score = 37 (18.1 bits), Expect = 1.7e-27, Sum P(3) = 1.7e-27
Identities = 28/145 (19%), Positives = 69/145 (47%)
Query: 478 ERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGV-----NENDI 532
+ IS ++ Q+ ++ ++ + + F+E + +L + I S+++ G N+N+
Sbjct: 885 QSKISPIIKIPNFQLNESERLETVLELLFIEIH-QLFKNETI-SVHSIGTKKSNNNDNNN 942
Query: 533 HKTLVEAIPKMLNWIILFKDSQD--LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPK-YG 589
+ T ++A + +++ + S D LN + + LK + + ++ + K Y
Sbjct: 943 NNTKIKA-DYIYSYVDVISISPDETLNL-ILSCEPSKIPLLKPNGIGELSDNYTGEKEYQ 1000
Query: 590 L--KGMIDASIRVKIESKRNEINGM 612
+ K +I R ++E+ N +NG+
Sbjct: 1001 IVNKPLIFDDFRAQVENGINALNGI 1025
>TAIR|locus:2171007 [details] [associations]
symbol:LBA1 "LOW-LEVEL BETA-AMYLASE 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA;IMP] [GO:0016246 "RNA interference" evidence=IGI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA;RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0009755 "hormone-mediated
signaling pathway" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0009744 "response to sucrose stimulus"
evidence=IGI] InterPro:IPR018999 Pfam:PF09416 GO:GO:0005829
GO:GO:0005886 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016246 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0009744 GO:GO:0008270 GO:GO:0010182
GO:GO:0004386 GO:GO:0000932 eggNOG:COG1112 InterPro:IPR014001
PROSITE:PS51192 EMBL:AB013394 HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL EMBL:AF484122 IPI:IPI00541997 RefSeq:NP_199512.2
UniGene:At.8584 ProteinModelPortal:Q9FJR0 SMR:Q9FJR0 STRING:Q9FJR0
PaxDb:Q9FJR0 PRIDE:Q9FJR0 EnsemblPlants:AT5G47010.1 GeneID:834747
KEGG:ath:AT5G47010 GeneFarm:2422 TAIR:At5g47010 InParanoid:Q9FJR0
PhylomeDB:Q9FJR0 ProtClustDB:CLSN2680462 Genevestigator:Q9FJR0
GermOnline:AT5G47010 Uniprot:Q9FJR0
Length = 1254
Score = 307 (113.1 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 106/358 (29%), Positives = 171/358 (47%)
Query: 998 NSAVDNLLIKLKSQSIDFVRIGR-HEVVHKEIQKHCLSAMNINSVEEIKKRLDQ-----V 1051
+S V+ L + + + +D H++ + ++ LS+ + + +K+ ++
Sbjct: 571 SSPVEYLTLHYQVRHLDTSEKSELHKLQQLKDEQGELSSSDEKKYKNLKRATEREITQSA 630
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLV 1110
V+ TC+G + L++ +F ++DE+ Q T P L PL+ K VLVGDH QL P++
Sbjct: 631 DVICCTCVGAADLRLSNFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVI 690
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+A G+ SLF RL + I LQ QYRM + E + Y L G I
Sbjct: 691 MCKKAARAGLAQSLFERLVTLGIKPIR-LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIE 749
Query: 1171 NAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
+ D PW P RP+ F A LN EA + K+
Sbjct: 750 RQTTGI-DF----PWPV----PNRPMFFYVQLGQEEISASGTSYLNR-TEAANVEKLVTA 799
Query: 1231 LVKNEIEGKDIGIITPYNSQ-ANLIRH-----SLS---VSSVEIHTIDKYQGRDKDCILV 1281
+K+ + IG+ITPY Q A ++ + SL +E+ ++D +QGR+KD I++
Sbjct: 800 FLKSGVVPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIIL 859
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
S VRS+E+ L D R+NVALTRA+ ++++G+ + LSK PL L+ E
Sbjct: 860 SCVRSNEHQG---IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNGLLTHYKE 914
Score = 99 (39.9 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V + +G +L+ + +N AVD
Sbjct: 489 LNASQVNAVKSVLQ-KPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 547
Query: 1004 LLIKLKSQSIDFVRI 1018
L K+ + + VR+
Sbjct: 548 LAEKISATGLKVVRL 562
>DICTYBASE|DDB_G0268660 [details] [associations]
symbol:DDB_G0268660 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268660
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 InterPro:IPR002058
ProtClustDB:CLSZ2429765 RefSeq:XP_646847.2
ProteinModelPortal:Q55F23 EnsemblProtists:DDB0304625 GeneID:8616530
KEGG:ddi:DDB_G0268660 InParanoid:Q55F23 Uniprot:Q55F23
Length = 2314
Score = 365 (133.5 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 126/405 (31%), Positives = 201/405 (49%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSA 1000
+ LN Q AI L+ K LI G PGTGKT+T+ + + LL IL+ ++++
Sbjct: 1393 QELNASQFNAIETSLSKKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKILVCGPSHAS 1452
Query: 1001 VDNLLIKLKSQSI----------DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
VD + + +S+ + VRIG+ + + + H +S + + K+ +
Sbjct: 1453 VDEVAKRCLKKSLINVDGKPYLPNMVRIGKLQNISPDC--HRISPYDKTPAQR-KEIIRN 1509
Query: 1051 VKVVAVTCLGI-TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGDHYQLP 1107
+V T + + ++ K ++ ++DE+ Q++ P SL PL + K +LVGD QLP
Sbjct: 1510 ANIVFSTLSASGSGSVRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLILVGDPLQLP 1569
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P + S+ + ENG+ ISLF RLS+ P + L +QYRM I + Y DRL G
Sbjct: 1570 PTIFSSGSAENGLNISLFERLSKVLP--VEMLNTQYRMHPTISRFPSNQFYKDRLLDGD- 1626
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
N K V + + +K P+ F D++ + E ++L N +E ++ +
Sbjct: 1627 ---NVKSLVYNQHNFHSDIKYG-----PIRFY--DVIDSKEESGKRSLKNKLEITMVFTL 1676
Query: 1228 TQELVKNEIEGK--DIGIITPYNSQANLIRHSLSVSS----VEIHTIDKYQGRDKDCILV 1281
++LV++ E K GIITPY Q + I+ + +E TID QG +KD I++
Sbjct: 1677 IKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQGSEKDIIIL 1736
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
S VRS L D RINVALTRAK L ++G+ + L K
Sbjct: 1737 SCVRSER------IGFLSDRRRINVALTRAKFGLFVIGNSKLLKK 1775
Score = 45 (20.9 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 25/89 (28%), Positives = 41/89 (46%)
Query: 528 NENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPK 587
NENDI KT+ + L II +N F + +KK+K E+ + ++ + K
Sbjct: 92 NENDIFKTIFKH--SNLKDII-----NGINGVCKLFPNFDIKKIK--EILENDKTSLENK 142
Query: 588 YGL---KGMIDASIRV-KIESKRNEINGM 612
G+ ID S + K+ K N +N +
Sbjct: 143 IGIIKTSSSIDVSDKFSKLVKKTNLLNNI 171
Score = 43 (20.2 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 17/69 (24%), Positives = 33/69 (47%)
Query: 831 ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKD---- 886
IL + L G+I S VS FSK ++ ++ + ++ +++++I D
Sbjct: 131 ILENDKTSLENKIGIIKTSSSIDVSDKFSKLVKKTNLLNNINRNNNNNDIFQIYNDFIAL 190
Query: 887 EIMTSFSVM 895
+IM FS +
Sbjct: 191 KIMIEFSFL 199
Score = 41 (19.5 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 12/58 (20%), Positives = 31/58 (53%)
Query: 496 GLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVE--AIPKMLNWIILFK 551
G++K ++ +++++LV + N+ + N NDI + + A+ M+ + L++
Sbjct: 144 GIIKTSSSIDVSDKFSKLVKKTNLLNNINRNNNNNDIFQIYNDFIALKIMIEFSFLYQ 201
Score = 37 (18.1 bits), Expect = 2.4e-25, Sum P(3) = 2.4e-25
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 597 SIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ ++I+S ++ + ++LP + KT G S
Sbjct: 663 TFNLQIDSIKSMVKDIVLPFKKKTESYRIGTS 694
>UNIPROTKB|G4ND47 [details] [associations]
symbol:MGG_00976 "Regulator-nonsense transcripts 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR018999 Pfam:PF09416
GO:GO:0005524 GO:GO:0005737 EMBL:CM001235 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
KO:K14326 RefSeq:XP_003717973.1 ProteinModelPortal:G4ND47
SMR:G4ND47 EnsemblFungi:MGG_00976T0 GeneID:2674784
KEGG:mgr:MGG_00976 Uniprot:G4ND47
Length = 1105
Score = 302 (111.4 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 97/299 (32%), Positives = 149/299 (49%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQL 1106
L VV TC+G +P L KF ++DE+ Q+ P + PL+ K VLVGDH QL
Sbjct: 588 LSNADVVCCTCVGAGDPRLAKLKFRNVLIDESTQSAEPECMIPLVLGCKQVVLVGDHKQL 647
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
P++ + +A + G+ SLF RL + I L QYRM + E + + Y L G
Sbjct: 648 GPVIMNKKAAKAGLNQSLFERLVKLGLTPIR-LNVQYRMHPCLSEFPSNMFYEGSLQNGV 706
Query: 1167 DEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAK 1226
+++ D+ PW + P++F + A LN EA + K
Sbjct: 707 T--IQQRLR-RDVDF--PWPVADM----PMMFWSNLGNEEISASGTSYLNR-TEASNVEK 756
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSL---------SVSSVEIHTIDKYQGRDKD 1277
+ K ++ DIG++TPY Q + I ++ S VE+ ++D +QGR+KD
Sbjct: 757 LVTRFFKAGVKPGDIGVVTPYEGQRSYIVSTMQNTGTFKKESYKEVEVASVDAFQGREKD 816
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK-LLIN 1335
I++S VRS+E+ L D R+NVALTRAK ++++G+ + LSK L LLI+
Sbjct: 817 FIVLSCVRSNESQG---IGFLSDPRRLNVALTRAKYGVVIIGNPKVLSKHELWHHLLIH 872
Score = 97 (39.2 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 35/112 (31%), Positives = 52/112 (46%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q AI VL+ +LI G PGTGKT T + L M G+ +L+ + +N AVD
Sbjct: 452 LNGSQISAIKAVLSTP-LSLIQGPPGTGKTVTSATIIYHLAKMNGSQVLVCAPSNVAVDQ 510
Query: 1004 LLIKLKSQSIDFVRIGR--HEVVHKEIQKHCL-SAMNINSVEEIKKRLDQVK 1052
L ++ + VR+ E V + L + +N +L Q+K
Sbjct: 511 LCERVHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMNDTNPELAKLQQLK 562
Score = 51 (23.0 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 21/52 (40%), Positives = 26/52 (50%)
Query: 554 QDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDAS-IRVKIES 604
Q++ P V SD KKLK ++ D + W YGL AS I KIES
Sbjct: 280 QNIFGPLVKMESDYDKKLKEAQSEDGLVVRW--DYGLNNKHLASFILPKIES 329
Score = 44 (20.5 bits), Expect = 5.6e-27, Sum P(4) = 5.6e-27
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 814 AIPTKDMDCTLR-SGDYVILSTESDRLAVA 842
++PT +CT S DYV +T DR+ +A
Sbjct: 381 SVPT---ECTHNFSADYVWKATSYDRMQLA 407
>DICTYBASE|DDB_G0268662 [details] [associations]
symbol:DDB_G0268662 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 dictyBase:DDB_G0268662
Pfam:PF03828 GO:GO:0005524 EMBL:AAFI02000004 GO:GO:0004386
eggNOG:COG1112 InterPro:IPR002058 ProtClustDB:CLSZ2429765
RefSeq:XP_646848.1 ProteinModelPortal:Q55F22
EnsemblProtists:DDB0304624 GeneID:8616531 KEGG:ddi:DDB_G0268662
InParanoid:Q55F22 Uniprot:Q55F22
Length = 2523
Score = 378 (138.1 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 130/414 (31%), Positives = 206/414 (49%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--I 991
P+L + LN Q A+ L+ K LI G PGTGKT+T+ + + LL I
Sbjct: 1583 PSLLRSMCIQELNTSQFSAVETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPKFKI 1642
Query: 992 LLTSYTNSAVDNLLIK-LKSQ--SID-------FVRIGRHEVVHKEIQKHCLSAMNINSV 1041
L+ ++++VD + + LK +ID VRIG+ + + + H +S +
Sbjct: 1643 LVCGPSHASVDEVAKRCLKKSLVNIDGKPYLPNMVRIGKLQNISPDC--HRISLFDKTPA 1700
Query: 1042 EEIKKRLDQVKVVAVTCLGI-TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFV 1098
+ K + ++ T + P+ ++ K ++ ++DE+ Q++ P SL PL + K +
Sbjct: 1701 QR-KAIIRNATIIFATLSASGSKPIRSNFKANIVLVDESTQSSEPASLIPLCIGNIEKLI 1759
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGD QLPP + S+E+ +NG+ ISLF RLS+ P + L +QYRM I + Y
Sbjct: 1760 LVGDPLQLPPTIFSSESAKNGLNISLFERLSKVLP--VEMLNTQYRMHPTISRFPSNQFY 1817
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
DRL G N K V + + +K P+ F D++ + E ++L N
Sbjct: 1818 KDRLLDGD----NVKSLVYNQHNFHSDIKYG-----PIRFY--DVIDSKEESGKRSLKNK 1866
Query: 1219 VEACLIAKITQELVKNEIEGK--DIGIITPYNSQANLIRHSLSVSS----VEIHTIDKYQ 1272
+E ++ + ++LV++ E K GIITPY Q + I+ + +E TID Q
Sbjct: 1867 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGVQ 1926
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
G +KD I++S VRS L D RINVALTRAK L ++G+ + L K
Sbjct: 1927 GSEKDIIILSCVRSER------IGFLSDRRRINVALTRAKFGLFVIGNSKLLKK 1974
Score = 42 (19.8 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 21/90 (23%), Positives = 38/90 (42%)
Query: 122 IKLSQYDG---G-DEVTWNISPVNERLLAVSKQMPPE--NIRVLANSSR--LNSLTIHQC 173
+ +S+ DG G D V N +P +S+ + NI+V LN + + +
Sbjct: 1416 VSISEQDGTLIGLDRVKMNDTPTIHSFRELSEDLVAIKFNIKVKDELEEIYLNDILLFKT 1475
Query: 174 SHNKSKQPSPSPKAINRSLTTGRKRVNPCE 203
+ SK + S+ G+K++ CE
Sbjct: 1476 FDHTSKPMFALGLVTSNSVLKGKKQIIICE 1505
Score = 38 (18.4 bits), Expect = 8.6e-27, Sum P(3) = 8.6e-27
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 33 TQNSSK-NVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPP 91
TQ+++ V +SS P ++ P PP P S P+ SP + + +PP
Sbjct: 77 TQSTAPPTVPISSKSTMPLPPPPLTMPLPPSPPTMPLPPPPSSPPTVPISPPT-VPISPP 135
Query: 92 DNI-LP 96
+ LP
Sbjct: 136 STMPLP 141
Score = 38 (18.4 bits), Expect = 3.3e-25, Sum P(4) = 3.3e-25
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 181 PSPSPKAINRSLTTGRK 197
P+PSP A+ + T+ K
Sbjct: 523 PTPSPTALPKPSTSSTK 539
Score = 38 (18.4 bits), Expect = 3.3e-25, Sum P(4) = 3.3e-25
Identities = 21/77 (27%), Positives = 33/77 (42%)
Query: 537 VEAIPKMLNWII-LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMID 595
VE I K I+ +F S P + +D + L+ S +D E +K +I
Sbjct: 1347 VEVISKDSEEILSIFLKSSPERIPLIQ--ADNIHSLQDS-YSDQSEFVNL----MKPLIV 1399
Query: 596 ASIRVKIESKRNEINGM 612
R ++E NEI G+
Sbjct: 1400 EEYRAQLEGDFNEIEGV 1416
Score = 37 (18.1 bits), Expect = 1.1e-26, Sum P(3) = 1.1e-26
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 63 PPFSVYRNPSDSAPSKKNSPQSALENTPPDNILP 96
PP ++ S S P+ ++P TP P
Sbjct: 780 PPPTITTPTSTSTPTPTSTPTPTSTPTPTPTSTP 813
>MGI|MGI:99954 [details] [associations]
symbol:Ighmbp2 "immunoglobulin mu binding protein 2"
species:10090 "Mus musculus" [GO:0000049 "tRNA binding"
evidence=ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001078 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in negative regulation of
transcription" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006412 "translation"
evidence=NAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IMP]
[GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032575 "ATP-dependent 5'-3' RNA helicase activity"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043022 "ribosome binding" evidence=ISO;IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3'
DNA helicase activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR000058 InterPro:IPR001374
InterPro:IPR003593 InterPro:IPR004483 InterPro:IPR026853
Pfam:PF01424 PROSITE:PS51039 PROSITE:PS51061 SMART:SM00154
SMART:SM00382 SMART:SM00393 MGI:MGI:99954 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0006412 GO:GO:0030424 GO:GO:0043025
GO:GO:0008270 GO:GO:0051260 GO:GO:0006351 GO:GO:0043621
GO:GO:0043022 GO:GO:0030426 GO:GO:0021522 GO:GO:0030529
GO:GO:0000049 eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487
GO:GO:0043141 HOGENOM:HOG000185831 TIGRFAMs:TIGR00376
Gene3D:4.10.1110.10 GO:GO:0032575 HOVERGEN:HBG077019
OrthoDB:EOG4GHZNJ PANTHER:PTHR10887:SF23 EMBL:L10075
IPI:IPI00113033 PIR:S35633 UniGene:Mm.3179
ProteinModelPortal:P40694 SMR:P40694 IntAct:P40694 STRING:P40694
PhosphoSite:P40694 PaxDb:P40694 PRIDE:P40694 UCSC:uc008fwa.1
InParanoid:P40694 CleanEx:MM_IGHMBP2 Genevestigator:P40694
GermOnline:ENSMUSG00000024831 Uniprot:P40694
Length = 993
Score = 355 (130.0 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 122/399 (30%), Positives = 188/399 (47%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
++ K L LG P S H++ A+L R + + + +D + K K D
Sbjct: 253 RLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKNKKTQ-D 311
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL--LTDKK 1070
G K ++K + I + L VV T G ++ PL L +
Sbjct: 312 KREKGNFRSEIKLLRKE----LKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPEDY 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL RL+E
Sbjct: 368 FDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLAE 427
Query: 1131 EHPQAI-SALQSQYRMCQGIM-ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+H + L QYRM Q IM S A+ +G S S +A +K DL P + +
Sbjct: 428 KHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFTSHPS--VAGHLLK--DL----PGVTD 479
Query: 1189 ALNPCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I P
Sbjct: 480 TEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ T++ L+ L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEV 635
Score = 159 (61.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 60/231 (25%), Positives = 109/231 (47%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDK 885
SGD V L ++ +A+G++T I++ V+V+F + L + D ++ +R+ K
Sbjct: 85 SGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDL---QLNLDREN----TYRLLK 137
Query: 886 DEIMTSFSVMRYNXXXXXXXXXXXXXXRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSL 945
+ + R +I L S ++ + P LS+ +L
Sbjct: 138 --LANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTPSPAM--EIPPLSFY--NTTL 191
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N AVDNL+
Sbjct: 192 DLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLV 251
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV 1051
+L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 252 ERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQV 302
Score = 38 (18.4 bits), Expect = 1.0e-26, Sum P(2) = 1.0e-26
Identities = 27/128 (21%), Positives = 52/128 (40%)
Query: 115 KFSPEMLIKLSQYDGGDEVTWNISPVNERLLA-VSKQMPPENIRVLANSSRLNSLTI-HQ 172
KF P +++ + + GD V + N +L V ++ +++ V + S L + +
Sbjct: 71 KFGPAVVLPSNSFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRE 130
Query: 173 CSHNKSKQPSP-SPKAINRSLTTGRK-RVNPCEXXXXXXXXXXXXYSVSSQQSPFRTPPS 230
++ K + + K + ++L T +K P SS SP P
Sbjct: 131 NTYRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLG-------SSTPSPAMEIPP 183
Query: 231 LSYYHDKL 238
LS+Y+ L
Sbjct: 184 LSFYNTTL 191
>RGD|2322000 [details] [associations]
symbol:LOC100363957 "hypothetical protein LOC100363957"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR010666 Pfam:PF06839 RGD:2322000
GO:GO:0008270 GeneTree:ENSGT00550000074391 IPI:IPI00777941
Ensembl:ENSRNOT00000014695 Uniprot:F1M404
Length = 919
Score = 317 (116.6 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 109/332 (32%), Positives = 158/332 (47%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
V K I++H L N V L Q +VV +TC P + D KF V ++DE Q T
Sbjct: 581 VRKSIEQHKLGT---NRV-----LLKQARVVGITCAACPFPCMNDLKFPVVVLDECSQMT 632
Query: 1084 LPVSLGPLM-F-ASKFVLVGDHYQLPPLVQSTEARE-NGMEISLFRRLSEEHPQAISALQ 1140
P SL P+ F K +LVGD QLPP +Q ++A NG+E +LF RL + I L+
Sbjct: 633 EPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHGNGLEQTLFDRLCLMGHKPIQ-LR 691
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYR I ++N L Y L G E + S WL C F N
Sbjct: 692 TQYRCHPVISAIANDLFYEGNLVNGISE--------RERSPVLEWLPTL---C----FYN 736
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS- 1259
E ++ + N EA K+ + L+ + +EG IG+IT Y SQ I LS
Sbjct: 737 VTGTEQVEREN--SFVNVAEAAFTLKLIRSLIASGLEGSMIGVITLYKSQMYKICSLLSA 794
Query: 1260 -------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
V +VE+ T+D +QG +K+ I++S VR+ + + R+NVALTR +
Sbjct: 795 VDVDHPDVKAVEVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKRMNVALTRGR 848
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+ L+++GS L K L +I G + G+
Sbjct: 849 RHLLIIGSLSCLRKNQLWGRVIQHCKGREDGL 880
Score = 82 (33.9 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
+L++S TN AVD +L+ L S + F+R+G + K + + L A + N E++K+
Sbjct: 508 LLISSSTNVAVDRVLLGLLSLGFEKFIRVGSVRKIAKPVLPYSLHASSDNESEQLKE 564
Score = 39 (18.8 bits), Expect = 2.1e-26, Sum P(3) = 2.1e-26
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 654 GLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
G+LY Q D T +V R + L + + ++
Sbjct: 23 GMLYQQQQDFTSQDLVSRQKALSLNLNQTSRTGEL 57
>CGD|CAL0003335 [details] [associations]
symbol:SEN1 species:5476 "Candida albicans" [GO:0035649 "Nrd1
complex" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0016180 "snRNA processing" evidence=IEA] [GO:0031126 "snoRNA
3'-end processing" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0006378 "mRNA
polyadenylation" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
InterPro:IPR014016 InterPro:IPR024714 PROSITE:PS51198
CGD:CAL0003335 GO:GO:0005524 GO:GO:0005634 GO:GO:0008033
GO:GO:0004386 eggNOG:COG1112 EMBL:AACQ01000003 EMBL:AACQ01000004
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_723003.1 RefSeq:XP_723150.1 ProteinModelPortal:Q5ANG6
STRING:Q5ANG6 GeneID:3635255 GeneID:3635333 KEGG:cal:CaO19.13359
KEGG:cal:CaO19.5938 Uniprot:Q5ANG6
Length = 2018
Score = 312 (114.9 bits), Expect = 4.9e-26, Sum P(5) = 4.9e-26
Identities = 109/368 (29%), Positives = 184/368 (50%)
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR------LDQ 1050
T S + + +L+ + I + R E+ K++ + A N +EI +R L +
Sbjct: 1455 TESLEEKEITELE-EKIRAINKKRSELA-KKLDEQREKASIANRTKEINRRNIQARILSE 1512
Query: 1051 VKVVAVTCLGITNPLLTDK--KFDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLP 1107
+V+ T G + L+ + +FD I+DEA Q ++ PL + K ++VGD QLP
Sbjct: 1513 AQVLCSTLSGSAHDLVANLSVQFDQVIIDEACQCLELSAIIPLRYGCKKCIMVGDPNQLP 1572
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P V S A E SLF R+ + HP ++ L QYRM I + ++ Y +L G
Sbjct: 1573 PTVLSQAAASYNYEQSLFVRMQKNHPDSVYMLDVQYRMHPMISKFPSSEFYNSKLKDGDG 1632
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLIAK 1226
+ +L++ PW K+ P P F D+L +E + ++L N EA + +
Sbjct: 1633 ML--------ELNT-RPWHKDP--PLTPYRFF--DILGKHEKNELTRSLFNTDEAIVALQ 1679
Query: 1227 ITQELVK----NEIEGKDIGIITPYNSQANLIRHSLS-------VSSVEIHTIDKYQGRD 1275
+T +L++ ++ GK IGII+PY Q I+ + ++ +T+D +QG++
Sbjct: 1680 LTDKLMQLLPQDKFSGK-IGIISPYKEQIRKIKEVFVRKYGKPILDEIDFNTVDGFQGQE 1738
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K+ I++S VR+S L D R+NVALTRAK L ++G+ +LS+ + K L+
Sbjct: 1739 KEIIIMSCVRASATGN---VGFLSDVRRMNVALTRAKTTLWILGNKDSLSRNEVWKKLLT 1795
Query: 1336 KVGEQSGI 1343
GE++ I
Sbjct: 1796 DAGERNCI 1803
Score = 85 (35.0 bits), Expect = 4.9e-26, Sum P(5) = 4.9e-26
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
+ND Q RAI+ ++ ++LI G PGTGKT T++ V
Sbjct: 1297 VNDSQARAIMGTFKSEGFSLIQGPPGTGKTKTILGIV 1333
Score = 53 (23.7 bits), Expect = 4.9e-26, Sum P(5) = 4.9e-26
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 989 ASILLTSYTNSAVDNLLIKLKS---------QSIDFVRIGRHEVVHKEIQ 1029
A IL+ + +N+AVD L+++L+ + VR+GR + ++ ++
Sbjct: 1361 AKILICAPSNAAVDELVLRLRDGVRNSSGEHMPLKVVRLGRSDAINSSVR 1410
Score = 52 (23.4 bits), Expect = 4.9e-26, Sum P(5) = 4.9e-26
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 163 SRLNSLTIHQCSHNKSKQPSPSPK-AINRSLTTGRKRVNPCE 203
S LN N K P P+P AI R L +K+ E
Sbjct: 968 SHLNPAPPRPAGFNSKKSPPPAPSVAIGRPLHAVKKKTTDSE 1009
Score = 42 (19.8 bits), Expect = 4.9e-26, Sum P(5) = 4.9e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 499 KEIPTMKFLEEYARLVLQKNIESLY 523
K+I K +E RL L N++ LY
Sbjct: 1055 KQIDEAKMAKERMRLRLNVNLKPLY 1079
Score = 42 (19.8 bits), Expect = 8.0e-25, Sum P(5) = 8.0e-25
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 577 TDIEEMAWAPKYGLKGMIDA-SIRVKIESKRNEING 611
T+ +A APK +KG + SIR K++ R+ I G
Sbjct: 930 TNKAPVAPAPKE-VKGTQNLDSIRQKLQQSRSSITG 964
Score = 40 (19.1 bits), Expect = 8.0e-25, Sum P(5) = 8.0e-25
Identities = 28/117 (23%), Positives = 49/117 (41%)
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA 539
S L L++ +F+ +++ +++EE + ++ N SL V E IH ++
Sbjct: 202 SPGTLFAGLVYLLFEGSGEEKLWACQWMEEMRQQKIRYNKSSLEEPLVVEFSIHLYRIQD 261
Query: 540 IPKMLN-------WIILFK--DSQD-------LNTPTVDFGS-DGLKKLKISEVTDI 579
K N W I +K D D NTP D G+ LK+S + ++
Sbjct: 262 A-KYFNDGTAIKFWEIFYKIFDFMDDEAFILRFNTPK-DIGAMSQYMNLKLSSIINV 316
>SGD|S000004685 [details] [associations]
symbol:NAM7 "ATP-dependent RNA helicase of the SFI
superfamily" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=IMP] [GO:0070478 "nuclear-transcribed mRNA catabolic
process, 3'-5' exonucleolytic nonsense-mediated decay"
evidence=IGI;IMP] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005844 "polysome" evidence=TAS] [GO:0003676 "nucleic acid
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA;TAS]
[GO:0006449 "regulation of translational termination" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IGI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006452 "translational frameshifting" evidence=IMP] [GO:0008186
"RNA-dependent ATPase activity" evidence=TAS] InterPro:IPR003593
InterPro:IPR018999 Pfam:PF09416 SMART:SM00382 SGD:S000004685
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003676 GO:GO:0016567
GO:GO:0030466 EMBL:BK006946 EMBL:Z49259 GO:GO:0005844 GO:GO:0008298
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 GO:GO:0004004
GO:GO:0070478 GO:GO:0006449 GeneTree:ENSGT00550000074391
EMBL:X62394 EMBL:M76659 PIR:S23408 RefSeq:NP_013797.1 PDB:2XZL
PDBsum:2XZL ProteinModelPortal:P30771 SMR:P30771 DIP:DIP-2373N
IntAct:P30771 MINT:MINT-492322 STRING:P30771 PaxDb:P30771
PeptideAtlas:P30771 EnsemblFungi:YMR080C GeneID:855104
KEGG:sce:YMR080C CYGD:YMR080c HOGENOM:HOG000205990 KO:K14326
OMA:MFYEGSL OrthoDB:EOG405W86 EvolutionaryTrace:P30771
NextBio:978431 Genevestigator:P30771 GermOnline:YMR080C
Uniprot:P30771
Length = 971
Score = 289 (106.8 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 96/299 (32%), Positives = 153/299 (51%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQL 1106
L++ VV TC+G + L D KF ++DE+ Q + P L P++ +K +LVGDH QL
Sbjct: 544 LNKADVVCCTCVGAGDKRL-DTKFRTVLIDESTQASEPECLIPIVKGAKQVILVGDHQQL 602
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
P++ +A + G++ SLF RL I L+ QYRM + E + + Y L G
Sbjct: 603 GPVILERKAADAGLKQSLFERLISLGHVPIR-LEVQYRMNPYLSEFPSNMFYEGSLQNGV 661
Query: 1167 DEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAK 1226
I + S PW + P++F A LN +EA +
Sbjct: 662 T-IEQRTVPNSKF----PWPIRGI----PMMFWANYGREEISANGTSFLNR-IEAMNCER 711
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQ-ANLIRH-----SLSVS---SVEIHTIDKYQGRDKD 1277
I +L ++ ++ + IG+ITPY Q A ++++ SL VE+ ++D +QGR+KD
Sbjct: 712 IITKLFRDGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKD 771
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK-LLIN 1335
I++S VR++E L D R+NV LTRAK L+++G+ R+L++ L LLI+
Sbjct: 772 YIILSCVRANEQQ---AIGFLRDPRRLNVGLTRAKYGLVILGNPRSLARNTLWNHLLIH 827
Score = 97 (39.2 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L + IL+ + +N AVD+
Sbjct: 409 LNSSQSNAVSHVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDH 467
Query: 1004 LLIKLKSQSIDFVRI 1018
L KL+ + VR+
Sbjct: 468 LAAKLRDLGLKVVRL 482
Score = 43 (20.2 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 511 ARLVLQKNIESLYA-------CGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNT---PT 560
ARL+ I L A +N+ D + EAIP +L + ++D+ + P
Sbjct: 190 ARLITPSQISKLEAKWRSNKDATINDIDAPEEQ-EAIPPLL---LRYQDAYEYQRSYGPL 245
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWA 585
+ +D K+LK S+ + ++W+
Sbjct: 246 IKLEADYDKQLKESQALEHISVSWS 270
Score = 39 (18.8 bits), Expect = 3.2e-19, Sum P(3) = 3.2e-19
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 854 VSVSFSKPLRL----PGRNSSSDADSLLHEVWRIDKDEIM 889
VS +PL L PG + + ++++ + +I KD I+
Sbjct: 417 VSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRIL 456
Score = 37 (18.1 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 680 RRNEFA--NDIIKASTTQQLPPMLRAY 704
R N+ A NDI + +PP+L Y
Sbjct: 206 RSNKDATINDIDAPEEQEAIPPLLLRY 232
>DICTYBASE|DDB_G0268914 [details] [associations]
symbol:DDB_G0268914 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
SMART:SM00382 dictyBase:DDB_G0268914 GO:GO:0005524
EMBL:AAFI02000004 GO:GO:0017111 eggNOG:COG1112 RefSeq:XP_647058.1
ProteinModelPortal:Q55EG2 EnsemblProtists:DDB0190122 GeneID:8616757
KEGG:ddi:DDB_G0268914 InParanoid:Q55EG2 OMA:ANCRVEN Uniprot:Q55EG2
Length = 4540
Score = 339 (124.4 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 129/410 (31%), Positives = 202/410 (49%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSA 1000
++LN+ Q AI + L LI G PGTGKT T+ + +L IL+ +++A
Sbjct: 3554 QTLNESQLAAINESLVHSSITLIQGPPGTGKTHTITSLISIILAINPDFKILVCGPSHAA 3613
Query: 1001 VDNL----LIK--LKSQSIDF----VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
VD + +IK L + + VRIG + + I H + N ++E KK + +
Sbjct: 3614 VDEVAKRVIIKGLLNDRGEKYIPTMVRIGLKDNIQDPIV-HDICVFN-RRLDE-KKMILE 3670
Query: 1051 VKVVAVTCLGITNPLLTDKKF--DVCIMDEAGQTT-----LPVSLGPLMFASKFVLVGDH 1103
+ + L + L F +V I+DEA Q+ +P+SLG K +LVGD
Sbjct: 3671 HSSICFSTLSASGSNLVQSSFKPNVVIVDEATQSCETSCIIPLSLGAKSM-KKLILVGDP 3729
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QLPP + S E+ G+ ISLF RLS+ P +S L QYRM I + ++ Y D L
Sbjct: 3730 VQLPPTIFSKESIHCGLGISLFERLSKVLP--VSMLNVQYRMHPLISKFPSSQFYHDILK 3787
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G + ++ SD S + R F TD + E + ++ N +E +
Sbjct: 3788 DGDNVVS------SDAYSLRFHENQDYGAIR--FFDVTD---SREERGKTSIKNQLEITM 3836
Query: 1224 IAKITQELVKNEIEGKD--IGIITPYNSQANLIRHS---LSVS-SVEIHTIDKYQGRDKD 1277
+ + ++L ++ E K GI+TPY Q I + L++S ++EI TID +QG +KD
Sbjct: 3837 VFTLIKKLTQDHPETKQYSFGIVTPYKLQRKEIEDAYKQLNLSLNIEIKTIDSFQGSEKD 3896
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+++S VR N + L D RINV++TRAK L ++G+ TL K+
Sbjct: 3897 IMIMSCVR------NESIGFLSDRRRINVSITRAKYGLFIIGNA-TLLKL 3939
Score = 69 (29.3 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 8 NSSRKLQSSQP---QPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPP 64
N++ KL S P P +G + + + N++ N + ++ N +++ +++ +S P
Sbjct: 3189 NTTSKLNSPAPFTYVPGSYGSLNNNNNNNNNNNNNNNNNNNNNNSSNNTLNTSNSSTIAP 3248
Query: 65 FSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKF-SPEMLIK 123
F +Y P N+ + E T PI T + P I+ + KF SP LI+
Sbjct: 3249 F-IYV-PGSYGNLNNNNSLTTKETTTTKTTTPIPTATVT----P-INSKIKFDSP--LIR 3299
Query: 124 LSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQ 172
D D ++ + + E +L + PE I VL +++ + L ++
Sbjct: 3300 ----DQIDVISMDSKHIIEEIL----KSAPERITVLQSNNIVKLLDCYE 3340
Score = 61 (26.5 bits), Expect = 1.4e-23, Sum P(5) = 1.4e-23
Identities = 22/97 (22%), Positives = 37/97 (38%)
Query: 13 LQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPS 72
L+ S Q I F+ Q S K+ S+ N +S + + + SP+ P S P
Sbjct: 176 LKISDDQDLSVVISQLFNEIVQ-SIKST-TSNNNNNDSSSVNNQLQSPSLPIVSPTLQPQ 233
Query: 73 DSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPE 109
P ++ P + PP P + +P+
Sbjct: 234 SKQPLQQQQPTQ--QQQPPQQQQPTQQQPTPQQPTPQ 268
Score = 48 (22.0 bits), Expect = 1.4e-23, Sum P(5) = 1.4e-23
Identities = 19/89 (21%), Positives = 38/89 (42%)
Query: 104 THHSPEISKRFKFSP-EMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANS 162
TH + R F+ +LIK Q D + + +N + K+ N ++ NS
Sbjct: 2702 THEDVSLISRSSFNEIYLLIKKYQNDYSSYSILSRNSLNRENIINKKE---NNREIINNS 2758
Query: 163 SRLNSLTIHQCSHNKSKQPSPSPKAINRS 191
+ N+ + ++N + + K+IN +
Sbjct: 2759 NNSNNNKNNNNNNNNNNNNKNNKKSINNN 2787
Score = 46 (21.3 bits), Expect = 1.4e-23, Sum P(5) = 1.4e-23
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 333 SKSQDKNGAGMLLEANSVVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSP 390
SK +KNG + S T +++ TS F + ++KN D ++ SP
Sbjct: 3130 SKKNNKNGDNESITTKSTTTSTSTSTKSSLSPTS---FTYVPANQKN---DKLNITSP 3181
Score = 44 (20.5 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 21/86 (24%), Positives = 35/86 (40%)
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLE---FKTGKIP 624
L+ I ++ D E K K ++ R +E+ N+I+G+ L + +I
Sbjct: 3327 LQSNNIVKLLDCYENHMEYKNSFKPILVEEFRKTLETNFNDIDGVKLADDGTISNLDRIN 3386
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKH 650
QS H + I L YL+H
Sbjct: 3387 MNQSMTIHSLEEISEECLNVTFYLRH 3412
Score = 44 (20.5 bits), Expect = 5.4e-23, Sum P(4) = 5.4e-23
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 538 EAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL-----KISEVTDIEE 581
+ IP L+ I + + Q T+DFG + LK + +I T +EE
Sbjct: 411 QQIPSFLDSIPMVQQQQQ--NQTIDFGIEILKNIFKSANQIKLYTSLEE 457
Score = 44 (20.5 bits), Expect = 7.2e-22, Sum P(5) = 7.2e-22
Identities = 18/67 (26%), Positives = 25/67 (37%)
Query: 38 KNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPI 97
K V S F + +S N P S + S S + KN+ S + PP I
Sbjct: 2456 KTVIASYFEDIAYAVNCYSQGGTNSPSISSTLSSSLSNNNNKNNNNSIFSSFPPMQISSS 2515
Query: 98 DDETNST 104
T S+
Sbjct: 2516 SPTTTSS 2522
Score = 44 (20.5 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+DAKS ++L+ +NE + + L F P D +N ++ D KC VG++ F
Sbjct: 116 MDAKSKDQLLKSMNEIKVFQNSAPLN---F-----P-DMIN--NDYSDNKKCSVGKDFTF 164
Score = 43 (20.2 bits), Expect = 9.0e-22, Sum P(5) = 9.0e-22
Identities = 23/98 (23%), Positives = 33/98 (33%)
Query: 12 KLQSSQPQPTKFGIQHFFDRHTQNSSKNVD--VSSFPQNPNSDLIHSVSSPN--CPPFSV 67
K S P P + D+ +NS N D V+ N + D N
Sbjct: 1134 KALSKTPTPKILPPKVLKDKSFKNSGINFDGIVNDENDNDDDDEDEDEDEENEEDEEDES 1193
Query: 68 YRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTH 105
Y N D+ + KN+ + + N I DE H
Sbjct: 1194 YENDIDNKNNNKNNNNDFIVSNKIQNQSQIGDEYGINH 1231
Score = 40 (19.1 bits), Expect = 2.3e-20, Sum P(5) = 2.3e-20
Identities = 21/125 (16%), Positives = 34/125 (27%)
Query: 2 PQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPN 61
PQ+ Q QPQ + Q + Q + PQ
Sbjct: 262 PQQPTPQQPTPQQQPQPQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQPPQQPPQPQP 321
Query: 62 CPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEML 121
P + P P + PQ + P P P+ ++ + P+
Sbjct: 322 QPQQQPQQQPQQQQPQQPQQPQQQPQQQPQQQ--PQQQPQQQQQPQPQQQQQPQQPPQQQ 379
Query: 122 IKLSQ 126
I+ Q
Sbjct: 380 IQPRQ 384
Score = 39 (18.8 bits), Expect = 2.1e-23, Sum P(4) = 2.1e-23
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 941 SEKSLN--DDQRRAIIKVLTAKDYALILGMPGTGKTS 975
++KS+N DD +A KV T + + PG G S
Sbjct: 2780 NKKSINNNDDIDKAKFKVPTVTSFTYV---PGGGYNS 2813
Score = 39 (18.8 bits), Expect = 2.3e-21, Sum P(5) = 2.3e-21
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 76 PSKKNSPQSALENTPPDNILPID 98
P +S S+L TP + PI+
Sbjct: 1626 PFSSSSSSSSLSTTPSSPLKPIN 1648
Score = 37 (18.1 bits), Expect = 1.8e-22, Sum P(5) = 1.8e-22
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 253 LRHTKKVLLQTYDFDDIHCLLLINSILHNT 282
+ + K++ DF I L + S+L+N+
Sbjct: 544 IANQSKLVQSLIDFQKIQPLFRLGSMLNNS 573
Score = 37 (18.1 bits), Expect = 6.8e-22, Sum P(3) = 6.8e-22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 542 KMLNWIILFKDSQDLNTPTV---DFGSDGLKKLKISE 575
K +N I +F++S LN P + D+ SD KK + +
Sbjct: 126 KSMNEIKVFQNSAPLNFPDMINNDY-SDN-KKCSVGK 160
Score = 37 (18.1 bits), Expect = 2.9e-21, Sum P(4) = 2.9e-21
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 26 QHFFDRHTQNSSKNVDVSSFPQNPNSD 52
+++ D +T N + N + S+ N D
Sbjct: 2914 ENYNDNYTDNDNNNNNDGSYNYNYGGD 2940
>WB|WBGene00004880 [details] [associations]
symbol:smg-2 species:6239 "Caenorhabditis elegans"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IGI] [GO:0005737 "cytoplasm"
evidence=IEA;IDA;TAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0030538
"embryonic genitalia morphogenesis" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0051721 "protein phosphatase 2A
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
EMBL:AF074017 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016246 GO:GO:0000184 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0040035 eggNOG:COG1112
GO:GO:0004004 GO:GO:0030538 HOGENOM:HOG000205990 KO:K14326
EMBL:FO081800 PIR:T43280 RefSeq:NP_490829.1
ProteinModelPortal:O76512 SMR:O76512 MINT:MINT-255670 STRING:O76512
PaxDb:O76512 GeneID:171696 KEGG:cel:CELE_Y48G8AL.6 UCSC:Y48G8AL.6
CTD:171696 WormBase:Y48G8AL.6 InParanoid:O76512 NextBio:872341
Uniprot:O76512
Length = 1069
Score = 277 (102.6 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 100/316 (31%), Positives = 147/316 (46%)
Query: 1030 KHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
K L M + V+E + L V+ TC + L+ + ++DE+ Q T P L
Sbjct: 564 KDDLRYMQLKRVKE-HELLAAADVICCTCSSAADARLSKIRTRTVLIDESTQATEPEILV 622
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
+M + VLVGDH QL P+V +A G+ SLF RL + LQ QYRM
Sbjct: 623 SIMRGVRQLVLVGDHCQLGPVVICKKAAIAGLSQSLFERLVLLGIRPFR-LQVQYRMHPV 681
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ E + + Y L G E V D W K P +P F +
Sbjct: 682 LSEFPSNVFYDGSLQNGVTENDRHMTGV-DWH----WPK----PNKPAFFWHCSGSEELS 732
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI---RHSLSV----- 1260
A LN EA + K+ +L+K ++ IG+IT Y Q + I H+
Sbjct: 733 ASGTSFLNR-TEAANVEKLVSKLIKAGVQPHQIGVITSYEGQRSFIVNYMHTQGTLNSKL 791
Query: 1261 -SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+VEI ++D +QGR+KD I+V+ VRS++ L D R+NVA+TRAK L++VG
Sbjct: 792 YENVEIASVDAFQGREKDYIIVTCVRSNDI---LGIGFLSDPRRLNVAITRAKYGLVLVG 848
Query: 1320 SCRTLSKVPLLKLLIN 1335
+ + L++ L LIN
Sbjct: 849 NAKVLARHDLWHELIN 864
Score = 108 (43.1 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q +A+ +VLT + +LI G PGTGKT V L+ + ++L+ S +N AVD+
Sbjct: 446 LNSSQMQAVKQVLT-RPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDH 504
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKE 1027
L K+ + VR+ H E
Sbjct: 505 LAEKIHKTGLKVVRLCARSREHSE 528
Score = 44 (20.5 bits), Expect = 6.0e-25, Sum P(3) = 6.0e-25
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 231 LSYYH-DKLANGVACNGASDHLGLRHTKKV 259
L+++H + A+GV D L L+H++ V
Sbjct: 314 LAFFHLPQFADGVMKLAKGDELRLKHSQTV 343
>ASPGD|ASPL0000056713 [details] [associations]
symbol:AN0646 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR003593 InterPro:IPR018999 Pfam:PF09416 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0003677
GO:GO:0008270 GO:GO:0016567 GO:GO:0030466 GO:GO:0004386
GO:GO:0008298 InterPro:IPR014001 SMART:SM00487 GO:GO:0070478
HOGENOM:HOG000205990 OMA:MFYEGSL ProteinModelPortal:C8VS08
EnsemblFungi:CADANIAT00002030 Uniprot:C8VS08
Length = 1077
Score = 336 (123.3 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 104/345 (30%), Positives = 168/345 (48%)
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPL 1065
++L +I+ +++ + + E+ + + ++ L+ V+ TC+G +P
Sbjct: 518 VRLNDSNIELIKLNQLKSELGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPR 577
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISL 1124
L KF ++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SL
Sbjct: 578 LAKLKFRTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSL 637
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL I L QYRM + E + + Y L G + +V D P
Sbjct: 638 FERLVILGCSPIR-LNVQYRMHPCLSEFPSNMFYEGSLQNGITSFDRLRREV-DF----P 691
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
W L+ P++F + A LN EA + KI K ++ KDIGII
Sbjct: 692 W--PILDS--PMMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVQPKDIGII 746
Query: 1245 TPYNSQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
TPY Q + I S+ + +E+ ++D +QGR+KD I++S VRS+++
Sbjct: 747 TPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQG---I 803
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L D R+NVALTRAK L+++G+ + LSK PL L+ E+
Sbjct: 804 GFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNCLLQHFKER 848
Score = 44 (20.5 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 814 AIPTKDMDCTLR-SGDYVILSTESDRLAVA 842
++PT +CT + DYV ST DR+ +A
Sbjct: 353 SVPT---ECTHNFTADYVWKSTSFDRMQLA 379
Score = 41 (19.5 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 10/19 (52%), Positives = 10/19 (52%)
Query: 710 CSGLGNMFDSHIY-HLTTA 727
CS GN SHI HL A
Sbjct: 93 CSARGNTSSSHIVNHLVRA 111
>ZFIN|ZDB-GENE-070402-1 [details] [associations]
symbol:setx "senataxin" species:7955 "Danio rerio"
[GO:0006302 "double-strand break repair" evidence=IEA]
InterPro:IPR026121 ZFIN:ZDB-GENE-070402-1 GO:GO:0006302
InterPro:IPR024481 Pfam:PF12726 GeneTree:ENSGT00580000081652
PANTHER:PTHR10887:SF15 EMBL:CU927918 IPI:IPI00481119
Ensembl:ENSDART00000082314 Ensembl:ENSDART00000149777
Uniprot:E7FBJ2
Length = 2368
Score = 302 (111.4 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
Identities = 96/294 (32%), Positives = 142/294 (48%)
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L + F I+DEA Q +L P+++ +LVGD QLPP V S +A+E G + SL
Sbjct: 1950 LGHEPFSCVIIDEASQAKETETLIPMLYRCPSVILVGDPNQLPPTVVSQKAKEFGFDQSL 2009
Query: 1125 FRRLSEE-HPQ-----AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
RL + HP I L QYRM I E + IY L E A + +S
Sbjct: 2010 MARLCKSLHPSNSKLPPILLLSMQYRMHPDICEFPSKYIYNSALK-NDCETAQKRCSLS- 2067
Query: 1179 LSSCSPWLKEALNPCRPV-IFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
W P +P +F D++ E K+ + N E L+ + + L K +
Sbjct: 2068 ------W------PFKPYKVF---DVMDGRETKERDSFINHKEVSLVGLLLKLLCKEQ-- 2110
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSS------VEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+G+ITPYN+Q + I ++ S VE+ T+D +QGR+ DCI+VS VR+S
Sbjct: 2111 AVRVGVITPYNAQKHRILDAIKTSGINKQLQVEVDTVDGFQGREMDCIIVSCVRASSEMG 2170
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+ +G+ R+NV +TRAK L ++G RTL + LI G + I+N
Sbjct: 2171 SI--GFVGNRQRMNVTITRAKFSLFILGHLRTLREQSDWGALIEDAGRRECIIN 2222
Score = 62 (26.9 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 946 NDDQRRAI---IKVLTAKD----YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
N DQ RAI I ++ K + LI G PGTGK+ T + LL + LL+S TN
Sbjct: 1716 NRDQARAIACGIAMIHRKQKTPKFLLIHGPPGTGKSKT----IGGLLYK----LLSSATN 1767
Query: 999 SA--VDNL 1004
S+ V NL
Sbjct: 1768 SSATVGNL 1775
Score = 62 (26.9 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
Identities = 41/169 (24%), Positives = 70/169 (41%)
Query: 35 NSSKNVDVSSFPQNPNSDLIHSVSSPNC-----PPFSVYRNPSDSAPSKKNSPQSALENT 89
++S++++ S P+S + S SS + P S +P SA + + +P A+
Sbjct: 1027 STSEDMEEPSSSTTPSSSAVSSTSSSSSSSSSTPSSSSITSPYFSASTSRGTP--AI--V 1082
Query: 90 PPDNILPIDDETNSTHHSPEISKR----FKFSPEMLIKLSQYD-GGDEVTWNISPVNERL 144
PP + I E ST + K+ F S L +++ G V + P +R
Sbjct: 1083 PPKKVRKIA-EPESTAERLGLKKKERKAFDLSQRSLDCVARLRCHGQNV--QVEPHQKRR 1139
Query: 145 LA--VSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPKAINRS 191
A SK P + + V AN + S I ++ K P+ + I S
Sbjct: 1140 RASRTSKTSPQKRM-VKANKKLMGSQDIQFFRQSREKHQKPATEPITTS 1187
Score = 60 (26.2 bits), Expect = 3.7e-23, Sum P(3) = 3.7e-23
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 44 SFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTP 90
S P+ S+ I S S P P + VY+ P N P ++ +P
Sbjct: 1440 SVPKLVTSNKISSTSEP--PSYKVYQRPEAPVNKPVNKPMPTMDQSP 1484
Score = 52 (23.4 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 2 PQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPN 61
PQ++ +++KL SQ +F + ++H + +++ + S+ D +HS S P
Sbjct: 1149 PQKRMVKANKKLMGSQD--IQF-FRQSREKHQKPATEPITTSASKPVSRQDELHS-SRPT 1204
Query: 62 CP 63
P
Sbjct: 1205 IP 1206
Score = 49 (22.3 bits), Expect = 5.0e-22, Sum P(3) = 5.0e-22
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLM----------------RGASILLTSYTN 998
K T K + LI G PGTGK+ T+ + LL R +LL + +N
Sbjct: 1733 KQKTPK-FLLIHGPPGTGKSKTIGGLLYKLLSSATNSSATVGNLHSKSRRTRVLLCAPSN 1791
Query: 999 SAVDNLLIKL 1008
+A+D+L+ K+
Sbjct: 1792 AAIDSLMKKV 1801
Score = 43 (20.2 bits), Expect = 3.6e-20, Sum P(4) = 3.6e-20
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 47 QNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTP 90
++ S+ + SS P S + S S+ S ++P S+ +P
Sbjct: 1025 RSSTSEDMEEPSSSTTPSSSAVSSTSSSSSSSSSTPSSSSITSP 1068
Score = 39 (18.8 bits), Expect = 9.3e-20, Sum P(4) = 9.3e-20
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 61 NCPPFSVYRN---PSDSAPSKKNSPQSALENTPPD 92
+C P V++ PSD + P L N PD
Sbjct: 670 SCGPEDVFKGKKEPSDPVLISELRPAVELTNIKPD 704
Score = 39 (18.8 bits), Expect = 9.3e-20, Sum P(4) = 9.3e-20
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 50 NSDLIHSVSSPNCPPFSVYRNPSDSAPSKKN-SPQSALENTPPDNI 94
N+DL SV + N + + D P++ + S S E P ++I
Sbjct: 874 NADLDGSVLTKNLKSDRILKPQLDETPNEASPSWSSETELVPDEDI 919
Score = 37 (18.1 bits), Expect = 4.5e-21, Sum P(4) = 4.5e-21
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 149 KQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPS 184
K+ P ++ SSR SL + +K P P+
Sbjct: 1354 KKAKPSTTKIYTPSSRSASLVLEM--EKGAKPPPPA 1387
>POMBASE|SPAC16C9.06c [details] [associations]
symbol:upf1 "ATP-dependent RNA helicase Upf1"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0002184 "cytoplasmic translational
termination" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006415
"translational termination" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR018999
Pfam:PF09416 SMART:SM00382 PomBase:SPAC16C9.06c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0000184 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 GO:GO:0004004 GO:GO:0002184 HOGENOM:HOG000205990
KO:K14326 OMA:MFYEGSL OrthoDB:EOG405W86 PIR:S62476
RefSeq:NP_593080.1 ProteinModelPortal:Q09820 SMR:Q09820
STRING:Q09820 PRIDE:Q09820 EnsemblFungi:SPAC16C9.06c.1
GeneID:2542327 KEGG:spo:SPAC16C9.06c NextBio:20803388
Uniprot:Q09820
Length = 925
Score = 278 (102.9 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 94/295 (31%), Positives = 147/295 (49%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDH 1103
K+ L V+ TC+G + ++ KF ++DEA Q + P + PL+ +K VLVGDH
Sbjct: 532 KELLRAAHVICCTCVGAGDRRISKYKFRSVLIDEATQASEPECMIPLVLGAKQVVLVGDH 591
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P+V + + + SLF RL L QYRM + E + Y L
Sbjct: 592 QQLGPVVMNKKVALASLSQSLFERLIILGNSPFR-LVVQYRMHPCLSEFPSNTFYEGTLQ 650
Query: 1164 CG---SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
G S+ IA + D PW++ P P++F A LN E
Sbjct: 651 NGVTTSERIA----RHVDF----PWIQ----PDSPLMFYANFGQEELSASGTSFLNR-TE 697
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLI----RHSLSVS-----SVEIHTIDKY 1271
A KI +++ + + IGI+TPY+ Q + I +++ S+ +VE+ ++D +
Sbjct: 698 ASTCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQYMQNNGSMQKDLYKAVEVASVDAF 757
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+KD I++S VRSSE+ + D R+NVALTRAK +I++G+ + L+K
Sbjct: 758 QGREKDFIILSCVRSSEHQG---IGFVNDPRRLNVALTRAKYGVIVLGNPKVLAK 809
Score = 84 (34.6 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRG------ASILLTSYT 997
LN Q A+ VL+ K +LI G PGTGKT T V L M+ + +L+ + +
Sbjct: 393 LNASQSEAVRAVLS-KPLSLIQGPPGTGKTVTSASVVYHLATMQSRKRKSHSPVLVCAPS 451
Query: 998 NSAVDNLLIKLKSQSIDFVRI 1018
N AVD L K+ + VR+
Sbjct: 452 NVAVDQLAEKIHRTGLRVVRV 472
Score = 49 (22.3 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 22/57 (38%), Positives = 28/57 (49%)
Query: 800 PNLNASDGDSLIGAAIPTKD---MDCTLR-SGDYVILSTESDRLAVASGLI-TEISR 851
PN N SD +G + D ++CT S DYV ST DR+ A L T+ SR
Sbjct: 306 PN-NVSDE---VGLELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSR 358
Score = 49 (22.3 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 661 SDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTT-QQLPPMLRAYGGNKECSGLGNMFDS 719
SD+ G+ ++RSD V + N F+ D + ST+ ++ LR + + G+ S
Sbjct: 310 SDEV-GLELKRSDKVPIECTHN-FSVDYVWKSTSFDRMQTALRLFATD------GSRLSS 361
Query: 720 HIYHLTTAH 728
+YH H
Sbjct: 362 FLYHKLLGH 370
Score = 38 (18.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 112 KRFKFSPEM--LIKL 124
K +KF+PE+ L+KL
Sbjct: 494 KNYKFNPELQRLLKL 508
Score = 37 (18.1 bits), Expect = 1.3e-22, Sum P(4) = 1.3e-22
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 235 HDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHC 271
++ +++ V+ + GL H + LL + + HC
Sbjct: 8 NNDISSLVSSKNMTSENGLEHQFEELLVEKQYSEEHC 44
>POMBASE|SPBC29A10.10c [details] [associations]
symbol:SPBC29A10.10c "tRNA-splicing endonuclease
positive effector (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=ISO] [GO:0016180 "snRNA processing" evidence=ISO]
[GO:0035649 "Nrd1 complex" evidence=ISO] [GO:0043144 "snoRNA
processing" evidence=ISO] InterPro:IPR024714 PomBase:SPBC29A10.10c
GO:GO:0005524 GO:GO:0005634 EMBL:CU329671 GO:GO:0008033
eggNOG:COG1112 GO:GO:0006364 GO:GO:0004004 GO:GO:0006369
GO:GO:0043144 GO:GO:0016180 KO:K10706 GO:GO:0035649
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
OrthoDB:EOG4MPMZ6 PIR:T40065 RefSeq:NP_596055.1
ProteinModelPortal:O94387 EnsemblFungi:SPBC29A10.10c.1
GeneID:2540523 KEGG:spo:SPBC29A10.10c NextBio:20801650
Uniprot:O94387
Length = 1944
Score = 282 (104.3 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 97/302 (32%), Positives = 149/302 (49%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDK--KFDVCIMDEAGQTTLPVSLGPLMFASKF-VLVGDHY 1104
L + +V T + LL + F I+DEA Q S+ PL + + V+VGD
Sbjct: 1485 LQEADIVCATLSASGHELLLNAGLTFRTVIIDEAAQAVELSSIIPLKYGCESCVMVGDPN 1544
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPP V S + + G SL+ R+ ++H ++ L QYRM I + Y +L
Sbjct: 1545 QLPPTVLSKTSAKFGYSQSLYVRMFKQHNESACLLSIQYRMNPEISRFPSKFFYNSKLLD 1604
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEA-LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
G + +S ++S PW ++ L R F N A+ + ++L N EA
Sbjct: 1605 GPN--------MSAVTS-RPWHEDPQLGIYR---FFNVHGTEAFS--NSKSLYNVEEASF 1650
Query: 1224 IAKITQELVK---N-EIEGKDIGIITPYNSQANLIRH-------SLSVSSVEIHTIDKYQ 1272
I + + L++ N + EGK IG++TPY SQ +R S+ ++IHT+D +Q
Sbjct: 1651 ILLLYERLIQCYLNIDFEGK-IGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQ 1709
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
G++KD I+ S VRSS + L D R+NVALTRAK L +VG+ + L + +
Sbjct: 1710 GQEKDIIIFSCVRSSMSGG---IGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQEDIFYS 1766
Query: 1333 LI 1334
LI
Sbjct: 1767 LI 1768
Score = 76 (31.8 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 23/70 (32%), Positives = 32/70 (45%)
Query: 916 IVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
I+D R S F+ D I +N+ Q AI + LI G PGTGKT
Sbjct: 1245 ILDANVTRLPSN--FTDDKKQK-IMKSYGVNEPQAYAIYASSVNDGFTLIQGPPGTGKTK 1301
Query: 976 TMVHAVKALL 985
T++ + A+L
Sbjct: 1302 TILGMIGAVL 1311
Score = 54 (24.1 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 24/115 (20%), Positives = 45/115 (39%)
Query: 4 RKKANSSRKLQSSQPQPTKFGIQHFF-----DRHTQNSSKNVDVSSFPQNPNSDLIHSVS 58
+ K ++++++ S P H D H + + +D + + P+ L+H+
Sbjct: 915 KSKQETTQRIRESAKVPRTSAGNHLSEKLNSDNHIPKALQKLDSADPIRKPS--LLHTSK 972
Query: 59 SPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKR 113
S Y NP D S + S E + + + E NS H S + +R
Sbjct: 973 S--------YSNPDDKNTSTSDEDTSESEEESSNGLFSLAREANS-HASKSLPQR 1018
Score = 54 (24.1 bits), Expect = 6.5e-20, Sum P(3) = 6.5e-20
Identities = 26/105 (24%), Positives = 47/105 (44%)
Query: 956 VLTAKDYALILGMPG-TGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS---- 1010
VLT+ L +PG T KTS IL+ + +N+A+D +L+++K+
Sbjct: 1310 VLTSSSQGLQFNVPGQTRKTSKN------------KILICAPSNAAIDEILLRIKAGVYD 1357
Query: 1011 -QSIDF----VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
+ I F +R+G + + ++ L I +E + DQ
Sbjct: 1358 HEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMIKQMELTNLKKDQ 1402
Score = 48 (22.0 bits), Expect = 6.8e-21, Sum P(4) = 6.8e-21
Identities = 16/49 (32%), Positives = 21/49 (42%)
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLL 656
E+NG I L KI + A I +L+ +LK DS LL
Sbjct: 731 EVNGFIFGLSDNDIKIVSANDKGSALAMCIADSLVTVSYWLKLTDSSLL 779
Score = 42 (19.8 bits), Expect = 6.8e-21, Sum P(4) = 6.8e-21
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 468 SVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPT-MKFLEEYARLVLQKNIESLYACG 526
S+L + S+ L G LL +I KE M+ + L+L K+++ LY G
Sbjct: 209 SILSDVKTISDNEFKILEGPLLQEIRSLDQKKENENEMQIFLKGLSLLL-KHVDHLYFRG 267
Query: 527 V 527
+
Sbjct: 268 L 268
>SGD|S000004422 [details] [associations]
symbol:SEN1 "Presumed helicase and subunit of the Nrd1
complex (Nrd1p-Nab3p-Sen1p)" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043144
"snoRNA processing" evidence=IEA] [GO:0008033 "tRNA processing"
evidence=IEA;IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA;IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0019904 "protein
domain specific binding" evidence=IMP;IDA] [GO:0031126 "snoRNA
3'-end processing" evidence=IMP] [GO:0006378 "mRNA polyadenylation"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA;IMP] [GO:0016180 "snRNA processing"
evidence=IEA;IMP] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISS] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=ISS] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0035649 "Nrd1 complex" evidence=IDA]
[GO:0005657 "replication fork" evidence=IDA] [GO:0045005
"maintenance of fidelity involved in DNA-dependent DNA replication"
evidence=IMP] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
InterPro:IPR024714 SGD:S000004422 GO:GO:0005524 GO:GO:0005634
GO:GO:0019904 GO:GO:0006378 EMBL:BK006945 GO:GO:0008033
eggNOG:COG1112 EMBL:U20939 EMBL:U21094 GO:GO:0006364 GO:GO:0006369
GO:GO:0031126 GO:GO:0043141 KO:K00088 RefSeq:NP_013536.3
GeneID:851152 KEGG:sce:YLR432W GO:GO:0016180 KO:K10706
RefSeq:NP_013534.3 GeneID:851150 KEGG:sce:YLR430W GO:GO:0035649
GO:GO:0032575 InterPro:IPR024481 PANTHER:PTHR10887:SF164
Pfam:PF12726 EMBL:M74589 PIR:S53416 ProteinModelPortal:Q00416
SMR:Q00416 DIP:DIP-881N IntAct:Q00416 MINT:MINT-427565
STRING:Q00416 PaxDb:Q00416 PeptideAtlas:Q00416 EnsemblFungi:YLR430W
CYGD:YLR430w GeneTree:ENSGT00580000081652 HOGENOM:HOG000246755
OMA:SAIIPLR OrthoDB:EOG4MPMZ6 NextBio:967924 Genevestigator:Q00416
GermOnline:YLR430W Uniprot:Q00416
Length = 2231
Score = 272 (100.8 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 107/364 (29%), Positives = 174/364 (47%)
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAV---- 1056
+ L +K++ S +GR +E K+ ++ N ++ +R Q ++AV
Sbjct: 1512 ISKLQLKIRELSKIINELGRDRDEMRE--KNSVNYRN----RDLDRRNAQAHILAVSDII 1565
Query: 1057 --TCLGITNPLLTDK--KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQ 1111
T G + +L KFD I+DEA Q T S+ PL + K ++VGD QLPP V
Sbjct: 1566 CSTLSGSAHDVLATMGIKFDTVIIDEACQCTELSSIIPLRYGGKRCIMVGDPNQLPPTVL 1625
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
S A SLF R+ + + L QYRM I + ++ Y RL G
Sbjct: 1626 SGAASNFKYNQSLFVRMEKNSSPYL--LDVQYRMHPSISKFPSSEFYQGRLKDGPG---- 1679
Query: 1172 AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQ 1229
D+ + PW L P P F D++ + ++ +T++ N E + ++
Sbjct: 1680 -----MDILNKRPW--HQLEPLAPYKFF--DIISGRQEQNAKTMSYTNMEEIRVAIELVD 1730
Query: 1230 ELVK---NEIE--GKDIGIITPYNSQANLIRHSLSV-------SSVEIHTIDKYQGRDKD 1277
L + N+I+ GK IGII+PY Q +R + S++ +TID +QG++K+
Sbjct: 1731 YLFRKFDNKIDFTGK-IGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKE 1789
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
IL+S VR+ + + L D+ R+NVALTRAK + ++G R+L+K L + LI
Sbjct: 1790 IILISCVRADDTKSSV--GFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKLWRDLIEDA 1847
Query: 1338 GEQS 1341
++S
Sbjct: 1848 KDRS 1851
Score = 78 (32.5 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
LN Q AI+ ++ + ++LI G PGTGKT T++
Sbjct: 1335 LNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTIL 1368
Score = 63 (27.2 bits), Expect = 4.9e-22, Sum P(3) = 4.9e-22
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSID---------FVRIGRHEVVHKEIQ 1029
L++ IL+ + +N+AVD + ++LKS D VR+GR +VV+ I+
Sbjct: 1400 LLKKQKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRSDVVNVAIK 1453
>FB|FBgn0034187 [details] [associations]
symbol:CG6967 species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS] UCSC:CG6967-RC
FlyBase:FBgn0034187 NextBio:801049 EMBL:AY119610
ProteinModelPortal:Q8MRI1 PRIDE:Q8MRI1 InParanoid:Q8MRI1
PhylomeDB:Q8MRI1 ArrayExpress:Q8MRI1 Bgee:Q8MRI1 Uniprot:Q8MRI1
Length = 825
Score = 243 (90.6 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 90/307 (29%), Positives = 143/307 (46%)
Query: 1053 VVAVTCLG---ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-----FVLVGDHY 1104
+VA C +T+ L F +DEAG +T P +L +M + +L GDH
Sbjct: 450 IVATLCTVARLVTDTLGRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHVILSGDHK 509
Query: 1105 QLPPLVQSTEARENGMEISLFRRL--SEEHPQAISA---LQSQYRMCQG------IMELS 1153
QL +++S A G+ SL RL S+ + + Q R+C+ I+ L
Sbjct: 510 QLGAVIKSNRAASLGLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLF 569
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ 1213
N L Y L A+ D++ + W NP P+IF T + E
Sbjct: 570 NELYYNGELK--------AQAPAMDVNLAANW-SVLTNPQFPIIFQATHGVTNREQNSTS 620
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGK-DIGIITPYNSQANLIR---HSLSVSSVEIHTID 1269
+ NN +EA +I + L+ + + G+ D+GI+ PY +Q L+ S +VE+ +++
Sbjct: 621 SYNN-LEAEVICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVE 679
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
YQGR+K I+ S V+S N + + R+NV L+RAK LI+VG+ TL
Sbjct: 680 TYQGREKTIIIASLVKSFTN-----MGFMCNPRRVNVLLSRAKALLILVGNPVTLRHHSD 734
Query: 1330 LKLLINK 1336
K +IN+
Sbjct: 735 FKFVINE 741
Score = 104 (41.7 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 932 QDPA----LSYIWSEKSLNDDQRRAIIKVL----TAKDYALILGMPGTGKTSTMVHAVKA 983
Q+PA LS + S N +Q A+ +++ T Y ++ G PGTGKT+T+V A+
Sbjct: 294 QEPATPTSLSLLNSTIYSNAEQLEAVQRIVAGPSTQGPY-ILFGPPGTGKTTTIVEAILQ 352
Query: 984 LLMRG--ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
L ++ + IL+T+ +NSA D + +KL +R+ H
Sbjct: 353 LRLQQPQSRILVTAGSNSACDTIALKLCEYIESNIRLQEH 392
Score = 43 (20.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 130 GDEVTWNISPVNERLLAVSKQMPPENIRVLANS-SRLNSLTIHQCSHNKS 178
G T + + E +L + Q P I V A S S +++ + C + +S
Sbjct: 336 GPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSACDTIALKLCEYIES 385
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 787 RFVYHFVRQHMPSPN 801
R HF +Q +P P+
Sbjct: 388 RLQEHFAQQKLPEPD 402
>TAIR|locus:2130384 [details] [associations]
symbol:MAA3 "MAGATAMA 3" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0009553 "embryo sac development"
evidence=IMP] [GO:0009875 "pollen-pistil interaction" evidence=IMP]
[GO:0010183 "pollen tube guidance" evidence=IMP] PROSITE:PS51198
GO:GO:0005524 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0004386 GO:GO:0009553 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:Z97339 GO:GO:0010183 EMBL:AL161542 EMBL:EU915246
IPI:IPI00522212 PIR:E71420 RefSeq:NP_193292.3 UniGene:At.33168
ProteinModelPortal:B6SFA4 SMR:B6SFA4 PaxDb:B6SFA4 PRIDE:B6SFA4
EnsemblPlants:AT4G15570.1 GeneID:827233 KEGG:ath:AT4G15570
GeneFarm:2417 TAIR:At4g15570 HOGENOM:HOG000030627 KO:K10706
OMA:TIMREFT PhylomeDB:B6SFA4 ProtClustDB:CLSN2680970
Genevestigator:B6SFA4 GO:GO:0009875 InterPro:IPR026852
PANTHER:PTHR10887:SF27 Uniprot:B6SFA4
Length = 818
Score = 264 (98.0 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 99/312 (31%), Positives = 147/312 (47%)
Query: 1048 LDQVKVVAVTCLGITNPLL--TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV-LVGDHY 1104
L++ +V T + LL +++ FDV I+DEA Q P +L PL K V LVGD
Sbjct: 459 LEEAAIVFATLSFSGSALLAKSNRGFDVVIIDEAAQAVEPATLIPLATRCKQVFLVGDPK 518
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEE-HPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QLP V ST A+++G S+F RL + +P + L++QYRM I + Y L
Sbjct: 519 QLPATVISTVAQDSGYGTSMFERLQKAGYP--VKMLKTQYRMHPEIRSFPSKQFYEGALE 576
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPC-RPVIFVNTDMLPAYEAKDHQTLNNPV--- 1219
GSD + + W K C P F D+ E++ + V
Sbjct: 577 DGSD---------IEAQTTRDWHKYR---CFGPFCFF--DIHEGKESQHPGATGSRVNLD 622
Query: 1220 EACLIAKITQELVKNEIEGKD---IGIITPYNSQANLIRHSL-------SVSSVEIHTID 1269
E + I LV E K + II+PYN Q + + V+I+T+D
Sbjct: 623 EVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVD 682
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
+QGR+KD + S VR++EN + L + R+NV +TRAK +++VGS TL PL
Sbjct: 683 GFQGREKDVAIFSCVRANENGQ---IGFLSNSRRMNVGITRAKSSVLVVGSAATLKSDPL 739
Query: 1330 LKLLINKVGEQS 1341
K LI +++
Sbjct: 740 WKNLIESAEQRN 751
Score = 86 (35.3 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
++LN Q+ AI L+ K + LI G PGTGKT T++ + A++
Sbjct: 256 ENLNKSQKEAIDVGLSRKSFVLIQGPPGTGKTQTILSILGAIM 298
Score = 42 (19.8 bits), Expect = 1.3e-21, Sum P(3) = 1.3e-21
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSI 1013
+L+ + +NSA+D ++++L S +
Sbjct: 377 VLVCAPSNSALDEIVLRLLSSGL 399
Score = 37 (18.1 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 15/48 (31%), Positives = 20/48 (41%)
Query: 359 PENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERA 406
PE VN + VL + N D + VLRLL+ +E A
Sbjct: 364 PEVVNASRKYRLRVLVCAPSNSALDEI-------VLRLLSSGLRDENA 404
>UNIPROTKB|G3X7G5 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:DAAA02015125 EMBL:DAAA02015122
EMBL:DAAA02015123 EMBL:DAAA02015124 Ensembl:ENSBTAT00000027109
Uniprot:G3X7G5
Length = 1214
Score = 286 (105.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 121/461 (26%), Positives = 212/461 (45%)
Query: 920 EAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK----DYALILGMPGTGKTS 975
EA R D+ S P + LN++Q+ A+ ++L+ Y L G PGTGKT
Sbjct: 726 EASRLDA---VSGSPKAREKFFNPMLNENQKLAVRRILSGDCRPIPYVLF-GPPGTGKTV 781
Query: 976 TMVHAVKALL--MRGASILLTSYTNSAVDNLLIKL-KSQSI---DFVRIGR----HEVVH 1025
T++ A+ + + + IL+ + +NSA D + ++L +S+++ VR+ E +
Sbjct: 782 TIIEAILQVFHALPDSRILVCAPSNSAADLVCLRLHESRALRPGTMVRVNATCRFEETIT 841
Query: 1026 KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQT 1082
+ I+ +C E++ K + +V+ TC G+ + L F +DEAGQ
Sbjct: 842 EAIRPYCRDG------EDVWKA-SRFRVLITTCSSAGLFYQIGLRVGHFTHVFVDEAGQA 894
Query: 1083 TLPVSLGPLMFAS----KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL--------SE 1130
+ P L PL S + VL GD QL P+++S A G+ +S+ RL E
Sbjct: 895 SEPECLIPLGLVSDVSGQIVLAGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDE 954
Query: 1131 E--------HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
+ +P ++ L YR ++ L + L Y L +D ++S
Sbjct: 955 DAFGACGAYNPLLVTKLVKNYRSHSALLALPSRLFYHRELEVCADPTV--------VASL 1006
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQEL---VKNEIEGK 1239
W K P+IF A E + N P EA + + L V +++ +
Sbjct: 1007 LGWEKLPRKGF-PLIFHGVRGNEAREGRSPSWFN-PAEAVQVMRYCCMLARSVSSQVSAR 1064
Query: 1240 DIGIITPYNSQANLIR---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIG+ITPY Q I+ ++ + +++ +++++QG++ +++S VRS+E+
Sbjct: 1065 DIGVITPYRKQVEKIKILLRNVDLMDIKVGSVEEFQGQEYLVVIISTVRSNEDRFEDDRY 1124
Query: 1297 LLG---DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LG + R NVA+TR K LI++G+ L + P L+
Sbjct: 1125 FLGFLSNSKRFNVAITRPKALLIVLGNPHVLVRDPCFGALL 1165
Score = 62 (26.9 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 37/164 (22%), Positives = 71/164 (43%)
Query: 28 FFDRHTQNSSKNVDVSSFPQNPNSDLIHS--VSSPNCPPFSVYRNPSDSAPSKKNSPQSA 85
F D++ NS + S Q S ++S VSS +C ++ +KN PQ
Sbjct: 346 FADKNI-NSLDSCGESRTWQTLESSSVNSKEVSSGDCAC------KGENGVKEKNIPQKQ 398
Query: 86 LENTPPDNILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGGDEVTWNISPVNERLL 145
+ + PD ++P ET + + + +L+ S + G + N+ E L+
Sbjct: 399 VTESEPDGLIPAGGETRIVI-TCDAKNSGRCRELLLLCFSSFIIGRYLEVNVVSEEESLI 457
Query: 146 AVSKQMP---PENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPK 186
AV + ++ +VLA S++ + Q +++ + PS P+
Sbjct: 458 AVREPFSWKKSKSSQVLA-STKTTVVVTTQKRNSRRQLPSFLPQ 500
Score = 38 (18.4 bits), Expect = 5.3e-19, Sum P(2) = 5.3e-19
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI 602
S+GLK +++ V+D + + +G G+ D S RV I
Sbjct: 87 SNGLKAIRVEAVSDKWDDD-SKSHG-GGLSDPSPRVLI 122
>DICTYBASE|DDB_G0285243 [details] [associations]
symbol:DDB_G0285243 "putative splicing endonuclease"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
dictyBase:DDB_G0285243 EMBL:AAFI02000076 KO:K10706
InterPro:IPR024481 Pfam:PF12726 RefSeq:XP_002649136.1
ProteinModelPortal:C7G036 EnsemblProtists:DDB0252844 GeneID:8625002
KEGG:ddi:DDB_G0285243 OMA:DSINMIF Uniprot:C7G036
Length = 2069
Score = 283 (104.7 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 89/263 (33%), Positives = 132/263 (50%)
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
K FD+ I+DEA Q +L PL K +LVGD QLPP S A + EISLF+R
Sbjct: 1605 KNFDLVIVDEAAQAVELSTLIPLRHDVKKCILVGDPQQLPPTTISKVATKFQYEISLFQR 1664
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
L A + L++QYRM I + + + Y L G N + D +
Sbjct: 1665 LMN-CGMAPTVLKTQYRMHPMISKFPSKIFYRGELEDGK----NVREYKQD------YYN 1713
Query: 1188 EALNPCRPVIFVNTDMLPAY-EAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKD--IGI 1243
++ + P++F D+ + E + +L NP E L I +L+ N KD IG+
Sbjct: 1714 DSASRFGPLVFY--DLFDKHGEVRSSFFSLRNPTEVKLAKLIVDQLISNYPNTKDLEIGV 1771
Query: 1244 ITPYNSQA-NLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY SQ+ +L +VE+ TID +QG++KD ++ S VR+ + L D
Sbjct: 1772 ITPYKSQSVDLFNAFKGYQNVEVSTIDGFQGKEKDFVIFSSVRAHSGH---SIGFLSDIR 1828
Query: 1303 RINVALTRAKKKLIMVGSCRTLS 1325
R+NV LTRAK ++++G+ LS
Sbjct: 1829 RMNVGLTRAKYSMVILGNSSLLS 1851
Score = 84 (34.6 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVL-TAKDYALILGMPGTGKTSTMVHAVKA 983
DS S + P + SLN+ Q AI L ++L+ G PGTGKT T++ +
Sbjct: 1352 DSSSSTFKIPDKLFQKLRSSLNESQLSAIASTLKNLGGFSLLQGPPGTGKTKTILSLLSV 1411
Query: 984 L------LMRGAS---ILLTSYTNSAVDNLLIKLKSQSI 1013
+ + S IL+ + +N+AVD + +++K +
Sbjct: 1412 FTTVLTNIEKSHSDPKILVCAPSNAAVDEIALRIKKDGL 1450
Score = 52 (23.4 bits), Expect = 6.6e-21, Sum P(5) = 6.6e-21
Identities = 25/89 (28%), Positives = 36/89 (40%)
Query: 75 APSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGGDEVT 134
+P + QSAL PP ++P E S S + S IK++ GD V
Sbjct: 909 SPIQITKIQSAL--VPPKQVIP--QEPTSIWGSQPLPTSIHSST---IKIT---AGDIVA 958
Query: 135 WNISPVNERLLAVSKQMPPENIRVLANSS 163
++S L V+K PP +SS
Sbjct: 959 SSLSAPTNTPLVVTKPKPPATTTTTTSSS 987
Score = 39 (18.8 bits), Expect = 6.6e-21, Sum P(5) = 6.6e-21
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 161 NSSRLNSLTIHQCSHNKSKQPSPSPKAINRSLTTGRKRVN 200
+ S LN+ T ++N +K PS + N + TG +N
Sbjct: 1029 SGSALNNTT----TNNNNKFIKPSYNSSNNTFGTGFGNIN 1064
Score = 37 (18.1 bits), Expect = 3.0e-21, Sum P(3) = 3.0e-21
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 873 ADSLLHEVWRIDKDEIMTSFSVM 895
A S L + +I DEI + + V+
Sbjct: 209 ASSYLQTITKISMDEIQSVYPVI 231
Score = 37 (18.1 bits), Expect = 6.6e-21, Sum P(5) = 6.6e-21
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 792 FVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT--LRSGDYVILSTESDRL-AVASGLITE 848
++++ +LNA D A+P +D T L G + D++ A T+
Sbjct: 1073 YLKKDFEGSSLNAIDEFERNSVAVPLRDKKKTKMLDIGAPLAFKKTKDKVPAHMEDFTTK 1132
Query: 849 ISRFH 853
I H
Sbjct: 1133 IDSLH 1137
>UNIPROTKB|G4NIZ8 [details] [associations]
symbol:MGG_02784 "DNA-binding protein SMUBP-2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR024714 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0008033 GO:GO:0004386 EMBL:CM001237
GO:GO:0006364 GO:GO:0006369 GO:GO:0043144 GO:GO:0016180 KO:K10706
InterPro:IPR024481 PANTHER:PTHR10887:SF164 Pfam:PF12726
RefSeq:XP_003720957.1 EnsemblFungi:MGG_02784T0 GeneID:2682672
KEGG:mgr:MGG_02784 Uniprot:G4NIZ8
Length = 2037
Score = 267 (99.0 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 94/302 (31%), Positives = 141/302 (46%)
Query: 1043 EIKKR------LDQVKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVSLGPLMF- 1093
EIK+R L + V+ T G + + + F+ I+DEA Q +L PL +
Sbjct: 1538 EIKRRNIQQSILSEAHVLCATLSGAGHDMFKSLQVEFETVIIDEAAQCVELSALIPLKYG 1597
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
ASK +LVGD QLPP V S A G + SLF R+ + HP + L QYRM I
Sbjct: 1598 ASKCILVGDPKQLPPTVLSQSAARYGYDQSLFVRMQQNHPGKVHLLDCQYRMHPEISLYP 1657
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ 1213
+ Y L+ GSD AK++ PW L P F + + + ++
Sbjct: 1658 SKEFYEGLLADGSDM---AKLRQQ------PWHDNPL--LGPYRFFDVEGIQERGSRGQS 1706
Query: 1214 TLN-NPVEACL--IAKITQELVKN-EIEGKDIGIITPYNSQANLIRHSLS-------VSS 1262
+N N + + K + + +++GK IGIITPY +Q +R +
Sbjct: 1707 LVNTNEINVAIQIYTKFQADYASSIDMKGK-IGIITPYKAQLFALRQKFQERWGEGVLED 1765
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCR 1322
+E +T D +QGR+ + I+ S VR+S P + D R+NV LTRA+ L ++G R
Sbjct: 1766 IEFNTTDAFQGRECEIIIFSCVRAS--PTGGIG-FMTDIRRMNVGLTRARSSLWILGDSR 1822
Query: 1323 TL 1324
L
Sbjct: 1823 AL 1824
Score = 90 (36.7 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 24/56 (42%), Positives = 28/56 (50%)
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
FS D SY LN Q AII + L+ G PGTGKT T++ V ALL
Sbjct: 1313 FSNDRIQSY-QDNYQLNRGQAAAIINAKENDGFTLVQGPPGTGKTKTIIAMVGALL 1367
Score = 46 (21.3 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 770 SIVLDASNEHQKSYRDNRFVYHFVR-QHMPSPNLNASDGDSLI 811
S +L+ SN+ +SY+DN Y R Q N +DG +L+
Sbjct: 1308 SPILNFSNDRIQSYQDN---YQLNRGQAAAIINAKENDGFTLV 1347
Score = 44 (20.5 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 20/78 (25%), Positives = 30/78 (38%)
Query: 82 PQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGGDEVTWNISPVN 141
P SA ++ D + D ST P SK + K + G EVT+ I+
Sbjct: 1198 PISANKDKDRDRLSDGDIVLFSTAQDPLSSKESPHCLARVFKTGRKRGVLEVTYRITSKG 1257
Query: 142 ERLLAVSKQMPPENIRVL 159
A +P ++R L
Sbjct: 1258 NSRFASDHLLPGNDLRGL 1275
Score = 43 (20.2 bits), Expect = 8.0e-21, Sum P(3) = 8.0e-21
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 818 KDMDCTLRSGDYVILSTESDRLA 840
KD D L GD V+ ST D L+
Sbjct: 1205 KDRD-RLSDGDIVLFSTAQDPLS 1226
Score = 38 (18.4 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 184 SPKAINRSLTTGRKR 198
SP + R TGRKR
Sbjct: 1230 SPHCLARVFKTGRKR 1244
>RGD|1306056 [details] [associations]
symbol:Pric285 "peroxisomal proliferator-activated receptor A
interacting complex 285" species:10116 "Rattus norvegicus"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0004540 "ribonuclease activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 RGD:1306056 GO:GO:0005524
GO:GO:0003723 GO:GO:0004386 GO:GO:0004540 PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 IPI:IPI00567928 RefSeq:XP_001057758.2
RefSeq:XP_230961.5 UniGene:Rn.47450 ProteinModelPortal:D4ADC2
Ensembl:ENSRNOT00000017787 GeneID:296474 KEGG:rno:296474
UCSC:RGD:1306056 CTD:296474 OrthoDB:EOG4Q84WM NextBio:641262
ArrayExpress:D4ADC2 Uniprot:D4ADC2
Length = 2944
Score = 284 (105.0 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 103/322 (31%), Positives = 159/322 (49%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK---FVLVG 1101
K L++ V+ TC + L ++DEAG T P +L PL+ SK VL+G
Sbjct: 2623 KYELERHSVILCTCSCAASGSLKALNVRQILIDEAGMATEPETLIPLVCFSKTEKVVLLG 2682
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
DH QL P+V++ + R GM+ SLF R H AI L +QYRM + I + YG +
Sbjct: 2683 DHKQLRPVVKNEQLRNLGMDRSLFERY---HRDAIM-LDTQYRMHKDICSFPSMEFYGGK 2738
Query: 1162 LSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD-----MLPAYEAKDHQTLN 1216
L SD K S L K++ C PVIF + +L + E + +
Sbjct: 2739 LKTWSD----LKRPPSLLGHVG---KQS---C-PVIFGSVQGYEQKLLVSTEEGNENSRA 2787
Query: 1217 NPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQ 1272
NP E + +I ++L + ++ KD+ ++TPYN+QA I L V+ V + +I K Q
Sbjct: 2788 NPEEVTEVVRIIKQLTLDRTVDPKDVAVLTPYNAQAAAISRGLMQRGVTGVTVTSITKSQ 2847
Query: 1273 GRDKDCILVSFVRS---SENPRNCTSS----LLG---DWHRINVALTRAKKKLIMVGSCR 1322
G + ++VS VR+ S+ + T S LG D H++NVA+TRA++ L ++G
Sbjct: 2848 GSEWRYVIVSTVRTCPRSDMDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEGLCIIGDHL 2907
Query: 1323 TLSKVPLLKLLINKVGEQSGIL 1344
L PL L+ Q+ ++
Sbjct: 2908 LLRCCPLWHRLLGFCEAQNSLV 2929
Score = 67 (28.6 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
LN Q +A+ L K + +I G PGTGKT H V
Sbjct: 2447 LNQSQDKAVRSALQ-KQFTVIQGPPGTGKTVVGFHIV 2482
Score = 37 (18.1 bits), Expect = 1.0e-17, Sum P(2) = 1.0e-17
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 332 LSKSQDKNGAGMLLEANSVVNGVP 355
L++SQDK L + +V+ G P
Sbjct: 2447 LNQSQDKAVRSALQKQFTVIQGPP 2470
>POMBASE|SPAC6G9.10c [details] [associations]
symbol:sen1 "ATP-dependent 5' to 3' DNA/RNA helicase
Sen1" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006364 "rRNA processing" evidence=ISO] [GO:0006369
"termination of RNA polymerase II transcription" evidence=ISO]
[GO:0008033 "tRNA processing" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0016180 "snRNA
processing" evidence=ISO] [GO:0032575 "ATP-dependent 5'-3' RNA
helicase activity" evidence=IDA] [GO:0035649 "Nrd1 complex"
evidence=ISO] [GO:0043141 "ATP-dependent 5'-3' DNA helicase
activity" evidence=IDA] [GO:0043144 "snoRNA processing"
evidence=ISO] InterPro:IPR024714 PomBase:SPAC6G9.10c GO:GO:0005524
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006397
GO:GO:0008033 eggNOG:COG1112 GO:GO:0006364 GO:GO:0006369
GO:GO:0043144 GO:GO:0043141 GO:GO:0016180 KO:K10706 GO:GO:0035649
PIR:T39072 RefSeq:NP_594119.1 ProteinModelPortal:Q92355
EnsemblFungi:SPAC6G9.10c.1 GeneID:2541556 KEGG:spo:SPAC6G9.10c
OrthoDB:EOG4BCHWF NextBio:20802652 GO:GO:0032575 InterPro:IPR024481
PANTHER:PTHR10887:SF164 Pfam:PF12726 Uniprot:Q92355
Length = 1687
Score = 267 (99.0 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 95/302 (31%), Positives = 140/302 (46%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVG 1101
K L Q VV T G + L+ F I+DEA Q ++ PL + A K +LVG
Sbjct: 1344 KAILKQADVVCATLSGSGHDLVAHSSLNFSTVIIDEAAQAVELDTIIPLRYGAKKCILVG 1403
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
D QLPP V S +A SLF R+ + + L QYRM I + Y R
Sbjct: 1404 DPNQLPPTVLSKKAASLNYSQSLFVRIQKNFSNQMCLLSIQYRMHPDISHFPSKKFYDSR 1463
Query: 1162 LSCGSDEIANAKIKVSDLSSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
L G D +A K + +P + + L R + M Y ++ + L N V+
Sbjct: 1464 LEDG-DNMAE---KTQQVWHVNPKFTQYRLFDVRGKERTSNTM-STYNLEEVEYLVNMVD 1518
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-------SSVEIHTIDKYQG 1273
L+ K G+ IG+ITPY SQ + +R + V S+++I T+D +QG
Sbjct: 1519 E-LLNKFPDV----NFTGR-IGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQG 1572
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
++KD I S V+S L D+ R+NVALTRA+ L+++G+ TL L L
Sbjct: 1573 QEKDIIFFSCVKSYSKHG---IGFLRDFRRLNVALTRARSSLLIIGNMETLKTDDLWGSL 1629
Query: 1334 IN 1335
++
Sbjct: 1630 VD 1631
Score = 89 (36.4 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
+N+ Q +AI+ L + LI G PGTGKT T++ + ALL+
Sbjct: 1130 VNEPQAKAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLV 1171
Score = 49 (22.3 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 10/19 (52%), Positives = 16/19 (84%)
Query: 991 ILLTSYTNSAVDNLLIKLK 1009
ILL + +N+AVD +L++LK
Sbjct: 1194 ILLCAPSNAAVDEVLLRLK 1212
Score = 42 (19.8 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
Identities = 5/17 (29%), Positives = 13/17 (76%)
Query: 839 LAVASGLITEISRFHVS 855
+ + S L+ ++SR+H++
Sbjct: 1163 IGIISALLVDLSRYHIT 1179
Score = 39 (18.8 bits), Expect = 1.0e-20, Sum P(4) = 1.0e-20
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 1038 INSVEEIKKRLDQVKVVA 1055
I +EE++K++D + VA
Sbjct: 1280 IQKIEELEKQIDVARDVA 1297
>UNIPROTKB|Q9P2E3 [details] [associations]
symbol:ZNFX1 "NFX1-type zinc finger-containing protein 1"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] Pathway_Interaction_DB:telomerasepathway
GO:GO:0046872 eggNOG:COG1112 EMBL:AL049766 EMBL:AB037825
EMBL:AK000573 EMBL:AK002139 EMBL:AK022641 EMBL:AK023836
IPI:IPI00165981 IPI:IPI00220462 RefSeq:NP_066363.1
UniGene:Hs.371794 ProteinModelPortal:Q9P2E3 SMR:Q9P2E3
IntAct:Q9P2E3 STRING:Q9P2E3 PhosphoSite:Q9P2E3 DMDM:23821814
PaxDb:Q9P2E3 PeptideAtlas:Q9P2E3 PRIDE:Q9P2E3
Ensembl:ENST00000371752 Ensembl:ENST00000396105 GeneID:57169
KEGG:hsa:57169 UCSC:uc002xui.3 CTD:57169 GeneCards:GC20M047854
HGNC:HGNC:29271 HPA:HPA046629 neXtProt:NX_Q9P2E3
PharmGKB:PA143485687 HOVERGEN:HBG052201 InParanoid:Q9P2E3
OMA:CVRLCSE PhylomeDB:Q9P2E3 ChiTaRS:ZNFX1 GenomeRNAi:57169
NextBio:63185 ArrayExpress:Q9P2E3 Bgee:Q9P2E3 CleanEx:HS_ZNFX1
Genevestigator:Q9P2E3 GermOnline:ENSG00000124201 Uniprot:Q9P2E3
Length = 1918
Score = 247 (92.0 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 89/303 (29%), Positives = 146/303 (48%)
Query: 1048 LDQVKVVAVTCLGITN--PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHY 1104
L +VV +T G +L + + I++EA + ++ L A + +L+GDH
Sbjct: 975 LKDAQVVGMTTTGAAKYRQILQKVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQ 1034
Query: 1105 QLPPLVQSTEAREN-GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P + +N +E+SLF RL + + + L Q+RMC I L IY D L
Sbjct: 1035 QLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVR-LNYQHRMCPEIARLLTPHIYQD-LE 1092
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
+ KIK +SS N + FV + P E ++ ++ N EA
Sbjct: 1093 NHPSVLKYEKIK--GVSS---------N----LFFVEHNF-PEQEIQEGKSHQNQHEAHF 1136
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCIL 1280
+ ++ + + E I I+T Y Q +R + + + V +H +DKYQG + D IL
Sbjct: 1137 VVELCKYFLCQEYLPSQITILTTYTGQLFCLRKLMPAKTFAGVRVHVVDKYQGEENDIIL 1196
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+S VRS++ + L +RI VAL+RAKK + +G+ + L+KVPL +I+ + E
Sbjct: 1197 LSLVRSNQEGK---VGFLQISNRICVALSRAKKGMYCIGNMQMLAKVPLWSKIIHTLREN 1253
Query: 1341 SGI 1343
+ I
Sbjct: 1254 NQI 1256
Score = 103 (41.3 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 38/122 (31%), Positives = 58/122 (47%)
Query: 940 WSEKS---LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL---------MR 987
W K L+D Q A+ LT ++ A+I G PGTGKT + V+ALL ++
Sbjct: 590 WPSKEALKLDDSQMEALQFALT-RELAIIQGPPGTGKTYVGLKIVQALLTNESVWQISLQ 648
Query: 988 GASILLTSYTNSAVDNLLIKLKS-QSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
IL+ YTN A+D L + + Q VR+G + EI K + + + E ++
Sbjct: 649 KFPILVVCYTNHALDQFLEGIYNCQKTSIVRVGGRS--NSEILKQ-FTLRELRNKREFRR 705
Query: 1047 RL 1048
L
Sbjct: 706 NL 707
Score = 48 (22.0 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 642 LMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
L+ E +++ + G+L LQS + QG+ ++ D
Sbjct: 375 LLREDFVRPLREGILELLQSFEDQGLRKRKFD 406
Score = 44 (20.5 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 981 VKALLMRGAS-ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN 1039
+++LL + S +++T T+ + LL +S +F+ E++ + ++K C S M+
Sbjct: 149 LESLLQKDPSEVVITLATSLGLKELLSHSSMKS-NFL-----ELICQVLRKACSSKMDRQ 202
Query: 1040 SVEEIKKRLDQVKVVAVTCL 1059
SV + L K + V CL
Sbjct: 203 SVLHVLGILKNSKFLKV-CL 221
>UNIPROTKB|F1RXR7 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] GO:GO:0007283 GO:GO:0007281
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:BX321913 Ensembl:ENSSSCT00000001066
Uniprot:F1RXR7
Length = 1211
Score = 280 (103.6 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 119/449 (26%), Positives = 207/449 (46%)
Query: 922 PRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYAL---ILGMPGTGKTSTM 977
P F G + + P + LN++Q+ A+ ++L+ L + G PGTGKT T+
Sbjct: 719 PAFPGDGGLVTGTPRAREGFFNPMLNENQQLAVKRILSGDCRPLPYVLFGPPGTGKTVTV 778
Query: 978 VHAVKALL--MRGASILLTSYTNSAVDNLLIKL-KSQSID---FVRIGR----HEVVHKE 1027
+ AV + + + IL+ + +NSA D + ++L +S+ + VR+ E +
Sbjct: 779 IEAVLQVFHALPDSRILVCAPSNSAADLVCLRLHESRGLRPGAMVRVNATCRFEETILDA 838
Query: 1028 IQKHCLSAMNINSVEEIKKRLDQVKVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTL 1084
I+ +C E++ R + +VV TC G+ + L F +DEAGQ +
Sbjct: 839 IKPYCRDG------EDVW-RASRFRVVITTCSSAGLFYQIGLRVGHFTHVFVDEAGQASE 891
Query: 1085 PVSLGPLMFAS----KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL--------SEE- 1131
P L PL S + +L GD QL P+++S A G+ +S+ RL E+
Sbjct: 892 PECLIPLGLISDIDGQIILAGDPMQLGPVIKSRLAMAYGLNVSMLERLMARPAYLRDEDA 951
Query: 1132 -------HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
+P ++ L YR ++ L + L Y L + A+ K+ S L
Sbjct: 952 FGACGAYNPLLVTKLVKNYRSHSALLALPSRLFYHREL----EVCADPKVVTSLLG---- 1003
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAK---ITQELVKNEIEGKDI 1241
W K P++F A E + N P EA + + + V +++ DI
Sbjct: 1004 WEKLPRKGF-PLVFHGVRGTEAREGRSPSWFN-PTEAVQVMRYCCLLARSVSSQVSAGDI 1061
Query: 1242 GIITPYNSQANLIR---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
G+ITPY Q I+ ++ ++ V++ +++++QG++ I++S VRS+E+ L
Sbjct: 1062 GVITPYRKQVEKIKILLRNVGLAEVKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFL 1121
Query: 1299 G---DWHRINVALTRAKKKLIMVGSCRTL 1324
G + R NVA+TR K LI++G+ L
Sbjct: 1122 GFLSNSKRFNVAITRPKALLIVLGNPHVL 1150
>ZFIN|ZDB-GENE-030131-9089 [details] [associations]
symbol:mov10b.1 "Moloney leukemia virus 10,
homolog, b.1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR003593
SMART:SM00382 ZFIN:ZDB-GENE-030131-9089 GO:GO:0005524 GO:GO:0003723
GO:GO:0004386 GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:BX323059 EMBL:BC171375
IPI:IPI00801311 RefSeq:NP_001037807.2 UniGene:Dr.74181
ProteinModelPortal:Q1LXK4 STRING:Q1LXK4 Ensembl:ENSDART00000086946
GeneID:556024 KEGG:dre:556024 CTD:556024 HOGENOM:HOG000239755
InParanoid:Q1LXK4 OMA:NLVGECY OrthoDB:EOG4SXNC4 NextBio:20881283
Bgee:Q1LXK4 Uniprot:Q1LXK4
Length = 1013
Score = 208 (78.3 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 87/290 (30%), Positives = 141/290 (48%)
Query: 1071 FDVCIMDEAGQTTLP---VSLGPLMFAS--KFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
F +DEAG P +S+ L+ A + VL GD QL P+++S A + G+ +SL
Sbjct: 666 FSHIFVDEAGHAVEPEIVISVAGLLNAETGQLVLAGDPKQLGPILRSPFAIKYGLGLSLL 725
Query: 1126 RRLSEEHP-----------QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
RL ++ + ++ L YR I+++ N L Y + L +DEI++ +
Sbjct: 726 ERLMTQNELYQKGDTGFDNRYVTKLLQNYRSHPSILKVPNELFYDNELKACADEISSRQY 785
Query: 1175 KVSDLSSCSPWLKEALNPCR--PVIF---VNTD----MLPAY-EAKDHQTLNNPVEACLI 1224
C+ W E L P R PVIF V D P++ + + + ++ L+
Sbjct: 786 -------CT-W--EHL-PKRGFPVIFHGVVGKDERESTSPSFFNTSEIDKIMDYLKKLLL 834
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-------SVSSVE---IHTIDKYQGR 1274
+ + + K I KDIGII PY Q IR ++ S+S +E + +++++QG+
Sbjct: 835 TQAKKGIAK--ISPKDIGIIAPYRKQVEKIRQAIKIHRELKSLSGIEELKVGSVEEFQGQ 892
Query: 1275 DKDCILVSFVRSSEN----PRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
++ I+VS VRSS+ L + R NVA+TRAK LIMVG+
Sbjct: 893 ERKVIIVSTVRSSKEHIILDDKFNIGFLKNEKRFNVAVTRAKALLIMVGN 942
Score = 127 (49.8 bits), Expect = 3.7e-20, Sum P(2) = 3.7e-20
Identities = 60/188 (31%), Positives = 87/188 (46%)
Query: 934 PALSYIWSEK-SLNDDQRRAIIKVL--TAKDYA-LILGMPGTGKTSTMVHAVKALLMR-- 987
P+ ++ +K N +Q+ A+ ++ T+K L+ G PGTGKT T+V A+K +
Sbjct: 513 PSALRLFDQKLEKNPEQKTAVCNIVAGTSKPAPYLVFGPPGTGKTVTIVEAIKQVEKNTG 572
Query: 988 GASILLTSYTNSAVDNLLIKL-KSQSID---FVRIGRHEVVHKEIQKHCLSAMNI---NS 1040
GA IL + +NSA D L KL SQ +D RI KEI K + N+ N
Sbjct: 573 GARILACAPSNSAADQLGEKLITSQHVDARNIYRIYASSRNPKEIPKVLENNSNVEGENI 632
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLP---VSLGPLM 1092
+ K+ L K+V C +T L F V +DEAG P +S+ L+
Sbjct: 633 IFPCKEDLMPYKIVV--CTLVTAGRLVSGGFPVGHFSHIFVDEAGHAVEPEIVISVAGLL 690
Query: 1093 FASKFVLV 1100
A LV
Sbjct: 691 NAETGQLV 698
Score = 40 (19.1 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 24/87 (27%), Positives = 35/87 (40%)
Query: 945 LNDDQRRAIIKVLTAKDYA---------LILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
L +DQ R IK KD + L+L +PG + V +RG +LLT
Sbjct: 376 LEEDQMRMDIKRYNKKDVSMVRDRDKKLLVLELPGVSENRPSV-------LRGDHLLLTK 428
Query: 996 ---YTNSAVDNLLIKLKSQSIDFVRIG 1019
NS V + +D V++G
Sbjct: 429 SEELQNSNVTKYKGYVHRVELDQVKLG 455
Score = 38 (18.4 bits), Expect = 6.4e-11, Sum P(2) = 6.4e-11
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 517 KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDL 556
+NI +YA N +I K L E + I+F +DL
Sbjct: 602 RNIYRIYASSRNPKEIPKVL-ENNSNVEGENIIFPCKEDL 640
>UNIPROTKB|E2RBM4 [details] [associations]
symbol:PRIC285 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AAEX03014158 Ensembl:ENSCAFT00000020582 OMA:RCQYAHS
Uniprot:E2RBM4
Length = 2919
Score = 284 (105.0 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 104/311 (33%), Positives = 156/311 (50%)
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDV--CIMDEAGQTTLPVSLGPLM-F--ASKFVL 1099
K LDQ +V+ TC + L +K DV ++DEAG T P +L PL+ F A K VL
Sbjct: 2598 KFELDQHRVILCTCSCAASASL--RKLDVRQILIDEAGMATEPETLIPLVAFSKAEKVVL 2655
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
+GDH QL P+V++ + + G++ SLF R H A L +QYRM +GI + Y
Sbjct: 2656 LGDHKQLRPVVKNEQLQNLGLDRSLFERY---HVDA-HMLDTQYRMHEGICAFPSMEFYE 2711
Query: 1160 DRLSCGSDEIANAKIKVS-DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
+L I SCS + ++ V+TD E ++ N P
Sbjct: 2712 KKLKTWQGLRRPPSILGHIGKESCSVIFGHVQGHEQSLL-VSTD-----EGNENSKAN-P 2764
Query: 1219 VEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGR 1274
E + +I ++L +E KD+ I+TPYN+QA I L VS V + +I K QG
Sbjct: 2765 EEVAAVVRIAKQLTLGRTVEPKDVAILTPYNAQAAEISKRLVREGVSGVTVCSITKSQGS 2824
Query: 1275 DKDCILVSFVRS---SENPRNCTSS----LLG---DWHRINVALTRAKKKLIMVGSCRTL 1324
+ +LVS VR+ S+ + T S LG D +++NVA+TRA++ L ++G R L
Sbjct: 2825 EWRYVLVSTVRTCQESDLDQRPTKSWLKRFLGFVVDPNQVNVAITRAREGLCVIGDHRLL 2884
Query: 1325 SKVPLLKLLIN 1335
S PL + ++
Sbjct: 2885 SCCPLWRRFLD 2895
Score = 75 (31.5 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 21/60 (35%), Positives = 27/60 (45%)
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
P + S F + A +LN Q RA+ L K + +I G PGTGKT H V
Sbjct: 2400 PPLGTYSRFLEKQAFDLPGGPHTLNRSQNRAVRAALK-KQFTVIQGPPGTGKTVVAFHIV 2458
Score = 39 (18.8 bits), Expect = 6.1e-18, Sum P(2) = 6.1e-18
Identities = 11/48 (22%), Positives = 21/48 (43%)
Query: 148 SKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPKAINRSLTTG 195
S+ +P ++ R + L S+T+H S +P + + L G
Sbjct: 2531 SRGLPKKSPREGRPNQTLRSITLHHRVRQSSNPYAPDIRDFDARLQKG 2578
Score = 38 (18.4 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 384 PVDAKSPYKVLRLLNEQSGEERA 406
PVDA ++L L+ EQ E A
Sbjct: 2055 PVDASLWQQLLELVQEQRWPELA 2077
Score = 37 (18.1 bits), Expect = 6.4e-20, Sum P(3) = 6.4e-20
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 373 LEVSEKNRPADPVDAKSPY 391
L +E P DP D +S +
Sbjct: 1278 LTATENRDPEDPEDTESDF 1296
>UNIPROTKB|E1C4T7 [details] [associations]
symbol:Gga.18015 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654
GO:GO:0006302 GeneTree:ENSGT00580000081652 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:AADN02026516 IPI:IPI00575045
Ensembl:ENSGALT00000005801 Uniprot:E1C4T7
Length = 2503
Score = 279 (103.3 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 91/273 (33%), Positives = 140/273 (51%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
F I+DEAGQ+ +L PL+ +K VLVGD QLPP ++S +A+E G SL RL
Sbjct: 2198 FSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTIKSIKAQEYGYGQSLMARLQ 2257
Query: 1130 ---EEHPQ-------AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
EE Q + L QYRM I ++ IY L +D K ++
Sbjct: 2258 RHLEEQVQNNLLRRLPVVQLTVQYRMHPDICLFPSSYIYDKTLK--TD-------KATEE 2308
Query: 1180 SSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELV--KNEI 1236
+ CS W P +P + D+ +E +D + +NP E L+ +I + + + ++
Sbjct: 2309 NRCSSEW------PFQPYLVF--DVGDGHEERDKDSFSNPQEVKLVLEIIRTIKEKRKDL 2360
Query: 1237 EGKDIGIITPYNSQANLIRHSL-----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+ IGIITPY++Q I+ L + S E+ T+D +QGR+KDCI+V+ VR+ N
Sbjct: 2361 GLRRIGIITPYSAQKKKIQEELDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRA--NSS 2418
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ L R+NV +TRA+ L ++G +TL
Sbjct: 2419 KGSIGFLASLQRLNVTITRARFSLFILGRLKTL 2451
Score = 64 (27.6 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 946 NDDQRRAIIKVLT-AKDY------ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
N+DQ+RAI K + LI G PGTGK+ T+V + +L TS N
Sbjct: 1959 NEDQKRAIETAYAMVKQHPGLAKICLIHGPPGTGKSKTIVGLLSRVLRENTRNEKTSKKN 2018
Query: 999 SAV 1001
+ +
Sbjct: 2019 AKI 2021
Score = 49 (22.3 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 48/259 (18%), Positives = 94/259 (36%)
Query: 441 ENNFLIVHPDVLV----SGTRVAASFSCPRRSVLDERLKCSERSISAL---LGTLLHQIF 493
E++ L P L S T++ +S S R + + L+ E+ AL +
Sbjct: 1595 ESDHLFAKPSSLPPRKPSTTKIFSSVSSSRNAAFSKDLENVEKQPPALKSRASIAKPAVL 1654
Query: 494 QAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD- 552
+ K IPT K + R NI Y + T + + W + +
Sbjct: 1655 RPRSEKAIPTRK---QTCRTPSSSNIPQPYISNNVLQSRNNTQINNASNISRWPVQAERC 1711
Query: 553 SQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
S L D + LK + + + P L + AS+ ++ + + N
Sbjct: 1712 SSFLGAQQHDHNIFVKEVLKWTYEMFANSIQFGPPSTLVQSVVASVPIRFQGYNDYFN-T 1770
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSG--LLYYLQSDQTQGVMVQ 670
PL Q +E++ L + + +++ + Y+ ++D T+ + +
Sbjct: 1771 FFPLMMLNAFETLAQEWVENQKMKDKTYYLHLQNFCADLNTAEFIGYFEETDLTKQLHPK 1830
Query: 671 RSDLVGLI--MRRNEFAND 687
DL+ L+ ++N F D
Sbjct: 1831 EDDLIFLVGQKKKNVFGED 1849
Score = 46 (21.3 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 4 RKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLI 54
R++ N+S + ++ + T +Q F + +N+ V++S+ + D I
Sbjct: 1157 REEINTSHQKETDNTEVTNSTLQEFSTK--ENAKDEVEISTDGSTVDKDFI 1205
Score = 43 (20.2 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKE 1027
G +LLT A+D+LL+ Q+ DF++ H + KE
Sbjct: 241 GICMLLTVLEEQAMDSLLLGPDKQN-DFMQSILH-TMEKE 278
Score = 38 (18.4 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 84 SALENTPPDNILPIDD 99
S LE+ P++ LP++D
Sbjct: 1074 STLESKMPNSPLPLED 1089
>MGI|MGI:2138982 [details] [associations]
symbol:Znfx1 "zinc finger, NFX1-type containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] MGI:MGI:2138982 GO:GO:0046872
EMBL:CH466551 eggNOG:COG1112 GeneTree:ENSGT00700000104467
EMBL:AL591711 CTD:57169 HOVERGEN:HBG052201 OMA:CVRLCSE
EMBL:AK149249 EMBL:AK150223 EMBL:AK157301 EMBL:BC025488
IPI:IPI00660406 RefSeq:NP_001028368.2 UniGene:Mm.297074
ProteinModelPortal:Q8R151 STRING:Q8R151 PhosphoSite:Q8R151
PaxDb:Q8R151 PRIDE:Q8R151 Ensembl:ENSMUST00000048988 GeneID:98999
KEGG:mmu:98999 HOGENOM:HOG000231023 InParanoid:A2A5R3
NextBio:353739 Bgee:Q8R151 CleanEx:MM_ZNFX1 Genevestigator:Q8R151
GermOnline:ENSMUSG00000039501 Uniprot:Q8R151
Length = 1909
Score = 242 (90.2 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 87/303 (28%), Positives = 144/303 (47%)
Query: 1048 LDQVKVVAVTCLGITN--PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHY 1104
L +VV +T G +L + + I++EA + ++ L A + +L+GDH
Sbjct: 968 LKDAEVVGMTTTGAAKYRQILQQVEPRIVIVEEAAEVLEAHTIATLSKACQHLILIGDHQ 1027
Query: 1105 QLPPLVQSTEAREN-GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QL P + +N +E+SLF RL + + + L Q+RM I L IY D
Sbjct: 1028 QLRPSANVYDLAKNFNLEVSLFERLVKVNIPFVR-LNYQHRMRPEIARLLTPHIYQDL-- 1084
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
E + +K + S L FV + P E ++ ++ N EA
Sbjct: 1085 ----ENHPSVLKYEQIKGVSSNL----------FFVEHNF-PEQEIQEGKSHQNQHEAHF 1129
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCIL 1280
+ ++ Q L+ E I I+T Y Q +R + V + +++H +DKYQG + D IL
Sbjct: 1130 VVELCQYLLCQEYLPSQITILTTYTGQLFCLRKLMPVKTFAGIKVHVVDKYQGEENDIIL 1189
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+S VRS++ + L +RI VAL+RAKK + +G+ + L+KVPL +I+ + E
Sbjct: 1190 LSLVRSNQEGK---VGFLQIPNRICVALSRAKKGMYCIGNMQMLAKVPLWSRIIHTLREN 1246
Query: 1341 SGI 1343
+ I
Sbjct: 1247 NQI 1249
Score = 103 (41.3 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 39/122 (31%), Positives = 56/122 (45%)
Query: 940 WSEKS---LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA------- 989
W K L+D Q A+ LT K+ A+I G PGTGKT + V+ALL +
Sbjct: 583 WPSKEALKLDDSQMEALQFALT-KELAIIQGPPGTGKTYVGLKIVQALLTNKSVWQINTQ 641
Query: 990 --SILLTSYTNSAVDNLLIKLKS-QSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
IL+ YTN A+D L + Q VR+G + EI K + + + E ++
Sbjct: 642 TFPILVVCYTNHALDQFLEGIYGCQKTSIVRVGGRS--NSEILKQ-FTLRELRNKREFRR 698
Query: 1047 RL 1048
L
Sbjct: 699 TL 700
Score = 40 (19.1 bits), Expect = 2.6e-19, Sum P(3) = 2.6e-19
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 624 PNGQSSMEHRAQVILYT--LLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
PN S V L T L+ E +++ + G+L LQS + Q + ++ D
Sbjct: 348 PNIISGKYESTAVYLDTHFRLLREDFVRPLREGILKLLQSFEDQCLRKRKFD 399
>UNIPROTKB|Q9BYK8 [details] [associations]
symbol:HELZ2 "Helicase with zinc finger domain 2"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 PROSITE:PS50157
SMART:SM00355 SMART:SM00382 SMART:SM00955 GO:GO:0005524
Reactome:REACT_111045 GO:GO:0005654 GO:GO:0044281 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0044255
GO:GO:0006351 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
GO:GO:0030374 eggNOG:COG0557 InterPro:IPR022966 EMBL:AL121829
EMBL:AF517673 EMBL:AB201715 EMBL:AB051556 EMBL:AK074171
EMBL:AK055611 IPI:IPI00249304 IPI:IPI00249305 IPI:IPI00736631
RefSeq:NP_001032412.2 RefSeq:NP_208384.3 UniGene:Hs.517180
ProteinModelPortal:Q9BYK8 IntAct:Q9BYK8 STRING:Q9BYK8
PhosphoSite:Q9BYK8 DMDM:209572784 PaxDb:Q9BYK8 PRIDE:Q9BYK8
GeneID:85441 KEGG:hsa:85441 UCSC:uc002yfl.1 UCSC:uc002yfm.2
CTD:85441 GeneCards:GC20M062189 HGNC:HGNC:30021 HPA:HPA051267
MIM:611265 neXtProt:NX_Q9BYK8 HOGENOM:HOG000231856
HOVERGEN:HBG080465 InParanoid:Q9BYK8 OMA:FRAAHIM PhylomeDB:Q9BYK8
GenomeRNAi:85441 NextBio:76020 ArrayExpress:Q9BYK8 Bgee:Q9BYK8
Genevestigator:Q9BYK8 GermOnline:ENSG00000130589
PANTHER:PTHR10887:SF16 Uniprot:Q9BYK8
Length = 2649
Score = 267 (99.0 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 98/314 (31%), Positives = 158/314 (50%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV--CIMDEAGQTTLPVSLGPLM-F--ASK 1096
E K LD+ +V+ TC + L K DV ++DEAG T P +L PL+ F A K
Sbjct: 2325 EARKFELDRHEVILCTCSCAASASL--KILDVRQILVDEAGMATEPETLIPLVQFPQAEK 2382
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
VL+GDH QL P+V++ + G++ SLF R E+ L +QYRM +GI +
Sbjct: 2383 VVLLGDHKQLRPVVKNERLQNLGLDRSLFERYHED----AHMLDTQYRMHEGICAFPSVA 2438
Query: 1157 IYGDRLSCGSD-EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y +L + + + SC P + + + V+TD E ++
Sbjct: 2439 FYKSKLKTWQGLRRPPSVLGHAGKESC-PVIFGHVQGHERSLLVSTD-----EGNENSKA 2492
Query: 1216 NNPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKY 1271
N E + +IT++L +E +DI ++TPYN+QA+ I +L ++ V + +I K
Sbjct: 2493 NLE-EVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALRREGIAGVAVSSITKS 2551
Query: 1272 QGRDKDCILVSFVRS---SENPRNCTSS----LLG---DWHRINVALTRAKKKLIMVGSC 1321
QG + +LVS VR+ S+ + T S LG D +++NVA+TRA++ L ++G
Sbjct: 2552 QGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNVAVTRAQEGLCLIGDH 2611
Query: 1322 RTLSKVPLLKLLIN 1335
L PL + L++
Sbjct: 2612 LLLRCCPLWRSLLD 2625
Score = 68 (29.0 bits), Expect = 2.9e-19, Sum P(2) = 2.9e-19
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVD 1002
LI G GTGKT T+ A ++ R + +L+ ++TNSA D
Sbjct: 541 LIYGPFGTGKTYTLAMASLEVIRRPETKVLICTHTNSAAD 580
Score = 65 (27.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
LN Q A+ + L K + +I G PGTGKT +H V
Sbjct: 2153 LNPSQNVAVREALE-KPFTVIQGPPGTGKTIVGLHIV 2188
>UNIPROTKB|E1BZJ8 [details] [associations]
symbol:MOV10L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007281 "germ cell development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
GeneTree:ENSGT00550000074391 OMA:NMSGVTL InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AADN02050039 EMBL:AADN02050037
EMBL:AADN02050038 IPI:IPI00585215 Ensembl:ENSGALT00000013959
ArrayExpress:E1BZJ8 Uniprot:E1BZJ8
Length = 1192
Score = 297 (109.6 bits), Expect = 1.0e-18, Sum P(4) = 1.0e-18
Identities = 125/435 (28%), Positives = 200/435 (45%)
Query: 945 LNDDQRRAIIKVLTAK----DYALILGMPGTGKTSTMVHAVKAL--LMRGASILLTSYTN 998
LN Q+ A+ ++L+ + Y ++ G PGTGKT T+V A+ + + + IL+ + +N
Sbjct: 752 LNKQQKLAVKRILSGECRPTPY-ILFGPPGTGKTITVVEAILQIHFTLPDSRILVCAPSN 810
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-VEEIKKRLDQV------ 1051
+A D + ++L ++ ++ G +V + C S I+ V+ K D +
Sbjct: 811 AATDLICLRLHQSNL--LKPGA--MVR--VNATCRSTEQIDDIVKPYCKDGDDIWKAVWF 864
Query: 1052 KVVAVTCLGITNPLLTDKK---FDVCIMDEAGQTTLPVSLGPLMFASK----FVLVGDHY 1104
+++ TC T + F I+DEAGQ + P SL P+ S+ VLVGD
Sbjct: 865 RIIITTCSSAGMFYQTGTRLGHFTHVILDEAGQASEPESLIPIGLISEVNGQIVLVGDPK 924
Query: 1105 QLPPLVQSTEARENGMEISLFRRL--------SEE--------HPQAISALQSQYRMCQG 1148
QL PL++S A G+ ISL RL E+ +P I+ L + YR
Sbjct: 925 QLGPLIKSRIAVAFGLNISLLERLISRDMYLRDEDAFSADGSYNPLLITKLVNNYRSHSA 984
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
++ L + L Y L +D S +SS W K P+IF E
Sbjct: 985 LLALPSKLFYHKELEVCAD--------TSVVSSLLHWEKLPRKGF-PLIFHGVRGKETRE 1035
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNE---IEGKDIGIITPYNSQANLIR---HSLSVSS 1262
N P EA + + L KNE + DIG+ITPY Q I+ S+ +S
Sbjct: 1036 GHSPSWFN-PTEAVQVMQYCCHLAKNESIAVSVTDIGVITPYRKQVEKIKFLLRSIDLSD 1094
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENP---RNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+++ T++++QG++ ++S VRS E+ L + R NVA+TRAK LI++G
Sbjct: 1095 IKVGTVEEFQGQECMVTILSTVRSYEDTFAEEEYCLGFLSNPKRFNVAITRAKALLIVIG 1154
Query: 1320 SCRTLSKVPLLKLLI 1334
+ L K P L+
Sbjct: 1155 NPHLLVKDPCFCALL 1169
Score = 41 (19.5 bits), Expect = 1.0e-18, Sum P(4) = 1.0e-18
Identities = 13/63 (20%), Positives = 34/63 (53%)
Query: 623 IPNG-QSSMEHRAQVILYT-LLMSERYLKHIDSGLLYYLQSDQT-QGVMVQRSDLVGLIM 679
IPN + +E + ++ + LL + L++ ++ L ++ Q + +++ D+ G+ +
Sbjct: 436 IPNELRRCVEQKLDILSFQPLLAAHLNLENYEAKFSTLLWLEEIYQEMEIKKFDMCGVTL 495
Query: 680 RRN 682
+RN
Sbjct: 496 KRN 498
Score = 40 (19.1 bits), Expect = 1.0e-18, Sum P(4) = 1.0e-18
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 36 SSKNVDVSSFPQNPNSDLI 54
S++ VD++S PQ + +I
Sbjct: 398 SARKVDITSVPQQKKTTVI 416
Score = 37 (18.1 bits), Expect = 1.0e-18, Sum P(4) = 1.0e-18
Identities = 7/33 (21%), Positives = 14/33 (42%)
Query: 767 CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPS 799
C + L + + +++Y FV +PS
Sbjct: 544 CNEDVTLKCNADFERAYNSEPMDVEFVHCRIPS 576
>UNIPROTKB|E1C0Z0 [details] [associations]
symbol:HELZ2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0004540 "ribonuclease
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001900 InterPro:IPR007087 InterPro:IPR015880
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS00028 SMART:SM00355
SMART:SM00955 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
GO:GO:0004386 GO:GO:0004540 OMA:FRAAHIM PANTHER:PTHR10887:SF16
GeneTree:ENSGT00550000074391 EMBL:AADN02019144 IPI:IPI00594758
Ensembl:ENSGALT00000009906 Uniprot:E1C0Z0
Length = 2565
Score = 238 (88.8 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 96/336 (28%), Positives = 155/336 (46%)
Query: 1016 VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
VR G E+ +EI++H + M + E L V+ TC + L +
Sbjct: 2221 VRAGE-EITEEEIKQHKHTLMEARAYE-----LACHDVILCTCSSASAGSLEKLNVKQIL 2274
Query: 1076 MDEAGQTTLPVSLGPLM---FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DE +T P +L PL+ A K VL+GDH QL P+V + + GME SLF R +
Sbjct: 2275 IDECAMSTEPETLIPLVSHKHAEKVVLLGDHKQLKPVVNNDFCKSLGMETSLFERYQK-- 2332
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
QA L +QYRM + I E + Y RL + + + C P + +
Sbjct: 2333 -QAWM-LDTQYRMHKNICEFPSQEFYEHRLKTCPQLLRIPSVLYHKNNRCCPIIFGHVEG 2390
Query: 1193 CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQEL-VKNEIEGKDIGIITPYNSQA 1251
+ ++T+ E ++ N P E + ++L + I + I I++PYN+Q
Sbjct: 2391 KEQSLVISTE-----EGNENSKAN-PEEVEQAVRTAKQLTLDGTIRPQSIAILSPYNAQV 2444
Query: 1252 NLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSS---ENPRNCTSSL----LG-- 1299
+ I L + V + TI K QG + +++S VRS E + T S LG
Sbjct: 2445 SEINKRLLKEGIRGVTVCTIMKSQGSEWRYVILSTVRSCSRHEIDKKPTKSWQKKHLGFV 2504
Query: 1300 -DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D +++NVA+TRA++ L ++G+ L PL + L+
Sbjct: 2505 TDPNQVNVAITRAQEGLCIIGNRYLLECNPLWRRLL 2540
Score = 90 (36.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
S++ LN Q +A++ LT K + LI G PGTGKT H V
Sbjct: 2064 SQRKLNPSQNKAVLNALT-KPFTLIQGPPGTGKTVVGTHIV 2103
>CGD|CAL0001700 [details] [associations]
symbol:orf19.702 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006449 "regulation of translational termination"
evidence=IEA] InterPro:IPR003593 InterPro:IPR007087
InterPro:IPR015880 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00355
SMART:SM00382 CGD:CAL0001700 GO:GO:0005524 GO:GO:0008270
GO:GO:0005622 GO:GO:0017111 eggNOG:COG1112 EMBL:AACQ01000183
EMBL:AACQ01000182 RefSeq:XP_711775.1 RefSeq:XP_711793.1
ProteinModelPortal:Q59PZ8 GeneID:3646609 GeneID:3646623
KEGG:cal:CaO19.702 KEGG:cal:CaO19.8321 Uniprot:Q59PZ8
Length = 1105
Score = 138 (53.6 bits), Expect = 4.0e-18, Sum P(4) = 4.0e-18
Identities = 67/215 (31%), Positives = 96/215 (44%)
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGDHYQLP 1107
Q KVV T + + + + V I+DEA Q++ P +L PL S K VLVGD QL
Sbjct: 784 QAKVVLATPV-VAGGIKSLNNVRVVIIDEATQSSEPTTLIPLALPSVEKLVLVGDQKQL- 841
Query: 1108 PLVQSTEARENGMEISLFRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
S + + +SLF R L + L +QYRM I E YG L G
Sbjct: 842 ----SCFSLIPNLSLSLFERVLLNGTYKTPHMLDTQYRMHPEISEFPRTKFYGGLLKDGI 897
Query: 1167 DEIANAKIKVSDLSSCSPWLKEALNPCRPVI--FVNTDMLPAYEAKDHQTLNNPVEACLI 1224
D ANA+ +SS + N + F+ D Y T N E I
Sbjct: 898 D--ANARQSEGVISSPLYFWDTKGNAREQSVRNFLRED--GGY------TYTNRDEIGYI 947
Query: 1225 AKITQELVKNE-IEGKDIGIITPYNSQANLIRHSL 1258
++ + L+ + ++ + IGIITPY+ Q +LI +L
Sbjct: 948 QQVLRTLIITKGVKPEQIGIITPYSGQRDLISATL 982
Score = 125 (49.1 bits), Expect = 4.0e-18, Sum P(4) = 4.0e-18
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VS + I +ID +QGR+KD +++S VRS N + L D R+NVALTRAK LIMVG
Sbjct: 1016 VSGIMIASIDAFQGREKDYMIMSCVRS--NTKGVIG-FLRDERRLNVALTRAKYGLIMVG 1072
Query: 1320 SCRTL 1324
+ L
Sbjct: 1073 DKKCL 1077
Score = 109 (43.4 bits), Expect = 4.0e-18, Sum P(4) = 4.0e-18
Identities = 30/97 (30%), Positives = 53/97 (54%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLTSYTNSA 1000
++LN+ Q++ + VL ++ G PGTGKTST+ + LL + IL+ + +N A
Sbjct: 638 QNLNESQKKGVQSVLN-NSITVLQGPPGTGKTSTIYEIILQLLDSLNTYPILVVAASNIA 696
Query: 1001 VDNLLIKLKSQ-SIDFVRIGRHEVVHKEIQKHCLSAM 1036
+DN+ KL ++ D +RI E + H L+++
Sbjct: 697 IDNIAEKLMTKHGKDILRITAAEKERDYNRSHPLASI 733
Score = 43 (20.2 bits), Expect = 4.0e-18, Sum P(4) = 4.0e-18
Identities = 37/203 (18%), Positives = 75/203 (36%)
Query: 37 SKNVDVSSFPQNPNSDLIHSVSSPN---CPPFSVYRNPSDSAPSKKNSPQSALE-NTPPD 92
S +V S P+ S S+P+ P S P + + N P++ + ++ P
Sbjct: 252 SPSVSGKSTPKPGKSPATSGKSTPHFGKSPSVSGTTTPKARSSTPVNDPKNKPKPDSKPK 311
Query: 93 NILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMP 152
N + N+++ P+ K K +P + + + P + + +
Sbjct: 312 NKAVNEKLENASNTKPK-PKIDKKTPTEKAENKSKSKENNTSSPKEPKGQAPTKLGSKKS 370
Query: 153 PENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPKAINRSLTTGRKRVNPCEXXXXXXXXX 212
PE + +SS+ +K KQ S P++ +++ +G K
Sbjct: 371 PEKDKTKESSSKTGKKPESAVKSDK-KQKSNVPQSYSKT-KSGSKAQQTANDNKKSGANL 428
Query: 213 XXXYSVSSQQSPFRTPPSLSYYH 235
SS++S PP ++ +H
Sbjct: 429 P-----SSKESSLVLPPYITKFH 446
>TAIR|locus:2135472 [details] [associations]
symbol:AT4G05540 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002687 GO:GO:0004386
KO:K10706 IPI:IPI00530269 RefSeq:NP_567301.2 UniGene:At.54170
ProteinModelPortal:F4JGH5 SMR:F4JGH5 PRIDE:F4JGH5
EnsemblPlants:AT4G05540.1 GeneID:825906 KEGG:ath:AT4G05540
OMA:WVIGNER Uniprot:F4JGH5
Length = 689
Score = 231 (86.4 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 87/271 (32%), Positives = 135/271 (49%)
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKF--VLVGDHYQLPPLVQSTEARENGMEISLFRRL- 1128
D+ ++DEA Q S+ L VL+GD QLP +VQS + SLF RL
Sbjct: 432 DMLVVDEAAQLKECESVAALQLQGLHHAVLIGDELQLPAMVQSEVCEKAKFVRSLFERLD 491
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
S H + + L QYRM I N YG ++S +A+I V + + +L+
Sbjct: 492 SLGHKKHL--LNVQYRMHPSISLFPNMEFYGGKIS-------DAEI-VKESTYQKRFLQG 541
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK---DIGIIT 1245
N F+N L E D + N VE ++++I L+K E K +G+I+
Sbjct: 542 --NMFGSFSFINVG-LGKEEFGDGHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVIS 598
Query: 1246 PYNSQANLIRHSL-----SVS----SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
PY +Q + I+ + SVS ++ + ++D +QG ++D I++S VRS NC +
Sbjct: 599 PYKAQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRS-----NCNGN 653
Query: 1297 L--LGDWHRINVALTRAKKKLIMVGSCRTLS 1325
+ L + R NVALTRA+ L ++G+ RTLS
Sbjct: 654 IGFLSNRQRANVALTRARHCLWVIGNERTLS 684
Score = 76 (31.8 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 944 SLNDDQRRAIIKVLTAKDYA------LILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+LN Q AI+ L ++ LI G PGTG T T+ + ALL ++ + T
Sbjct: 108 NLNSSQESAILACLETREIRDKTSVKLIWGPPGTGNTKTVATLLFALLSLSCKTVVCTPT 167
Query: 998 NSAV 1001
N+AV
Sbjct: 168 NTAV 171
>DICTYBASE|DDB_G0274399 [details] [associations]
symbol:DDB_G0274399 "DNA2/NAM7 helicase family
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR003593 SMART:SM00382
dictyBase:DDB_G0274399 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000012 GO:GO:0004386 eggNOG:COG1112 RefSeq:XP_644230.1
ProteinModelPortal:Q86AS0 EnsemblProtists:DDB0237968 GeneID:8619659
KEGG:ddi:DDB_G0274399 OMA:LIMISLH Uniprot:Q86AS0
Length = 967
Score = 229 (85.7 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 89/287 (31%), Positives = 135/287 (47%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHY 1104
LD+ +VA T LLT FD+ I+DEA Q +L P+ K VLVGD
Sbjct: 560 LDEADIVATTLSFSGASLLTKMAGGFDIVIIDEAAQAVETSTLIPIQHGCKKVVLVGDPK 619
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLP + S A + + SLF+RL E++ + L +QYRM I + Y D L
Sbjct: 620 QLPATIISPLAIKYKYDQSLFQRLQEKNSPHM--LTTQYRMHSLIRAFPSRHFYQDLLLD 677
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ-TLNNPVEACL 1223
G N + + S +P+ P++F D+ + E K ++ N E C
Sbjct: 678 GP----NIPSRATHYHS-NPFFG-------PLVFY--DLSWSTETKPGGGSVFNEHE-CK 722
Query: 1224 IAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDC 1278
+A +L +D IGII+PY Q +R + + I T+D +QGR+++
Sbjct: 723 MAMYLFQLFTKVYPDEDFASRIGIISPYRQQVLALREIFKNYPGISIDTVDGFQGREREI 782
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
I+ S VR+ L D R+NVALTR + L+++G+ + LS
Sbjct: 783 IIFSCVRAPVE-EGAGIGFLSDVRRMNVALTRPRSSLLILGNTKALS 828
Score = 82 (33.9 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
Identities = 26/81 (32%), Positives = 36/81 (44%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ G V P L +S + ND Q A+ L LI G PGTGKT ++ + L
Sbjct: 316 EDGIVMKIPPLLHDQFSS-TYNDSQLNALTSALEGNAITLIQGPPGTGKTHVILGLISVL 374
Query: 985 LMRGASILLTSYTNSAVDNLL 1005
L + S N+ D+LL
Sbjct: 375 LHSTIVPKVKSGGNNLGDHLL 395
Score = 37 (18.1 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 991 ILLTSYTNSAVDNLLIKL 1008
ILL + +N AVD ++ +L
Sbjct: 464 ILLCAPSNGAVDEIVSRL 481
>FB|FBgn0041164 [details] [associations]
symbol:armi "armitage" species:7227 "Drosophila melanogaster"
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=ISS;IMP] [GO:0007319 "negative
regulation of oskar mRNA translation" evidence=IMP] [GO:0000578
"embryonic axis specification" evidence=NAS;IMP] [GO:0016325
"oocyte microtubule cytoskeleton organization" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007317 "regulation of
pole plasm oskar mRNA localization" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0003678 "DNA helicase activity"
evidence=NAS] [GO:0030425 "dendrite" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0007616 "long-term memory"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0045202
"synapse" evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0046843 "dorsal appendage
formation" evidence=IMP] [GO:0007318 "pole plasm protein
localization" evidence=IMP] [GO:0070725 "Yb body" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005524
GO:GO:0005737 EMBL:AE014296 GO:GO:0016246 GO:GO:0000184
GO:GO:0030424 GO:GO:0043025 GO:GO:0030425 GO:GO:0007616
GO:GO:0045202 GO:GO:0007318 eggNOG:COG1112 EMBL:AY598469
RefSeq:NP_001014556.1 RefSeq:NP_647816.2 ProteinModelPortal:Q6J5K9
SMR:Q6J5K9 IntAct:Q6J5K9 STRING:Q6J5K9 PaxDb:Q6J5K9 GeneID:38427
KEGG:dme:Dmel_CG11513 UCSC:CG11513-RA CTD:38427 FlyBase:FBgn0041164
InParanoid:Q6J5K9 OMA:ITISTCT OrthoDB:EOG4DZ094 PhylomeDB:Q6J5K9
GenomeRNAi:38427 NextBio:808602 Bgee:Q6J5K9 GermOnline:CG11513
GO:GO:0070725 GO:GO:0003678 GO:GO:0046843 GO:GO:0031023
InterPro:IPR026122 PANTHER:PTHR10887:SF17 Uniprot:Q6J5K9
Length = 1274
Score = 158 (60.7 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 54/212 (25%), Positives = 97/212 (45%)
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
++ F S +P ++ L YR IM + + L Y D L E + + ++
Sbjct: 1012 DLQRFPESSGYNPLVLTKLLYNYRALPSIMSIYSRLFYDDELIPVLSEKDSRESRLLSKL 1071
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
C ++ + F + + D + NP E + +T L + +
Sbjct: 1072 RCVFESEKDIPQAHGTFFYGI-IGENRQNNDSPSWFNPQEVREVFLMTIALYRANVTADQ 1130
Query: 1241 IGIITPYNSQANLIRHSLSVSSV---EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
IGIITPY Q ++R + V +I +++++QG+++D IL+S VRSSE +
Sbjct: 1131 IGIITPYQKQVKMLRSMFIGTDVVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARF 1190
Query: 1298 -LGDWH---RINVALTRAKKKLIMVGSCRTLS 1325
LG R+NVA++RA+ +I+ G+ L+
Sbjct: 1191 SLGFVRCSKRLNVAVSRARAMMIIFGNPHLLA 1222
Score = 120 (47.3 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 36/123 (29%), Positives = 70/123 (56%)
Query: 940 WSEKSLNDDQRRAIIKVLT--AKDYALIL-GMPGTGKTSTMVHAVKALL--MRGASILLT 994
W +SLN Q+RA+ +L A++ +L G PG+GKT T++ + L+ + GA IL+
Sbjct: 779 WYNQSLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGARILVG 838
Query: 995 SYTNSAVDNLLIKL-KSQSI---DFVRIGRHEVVHK-----EIQKHCLSAMNINSVEEIK 1045
+ +NS+ D + +L S+++ DF+R+ + V K EI +C ++ ++ +V +
Sbjct: 839 TPSNSSADLVTKRLIDSKALLQGDFIRLVSYNQVEKDLIPPEIMSYCATS-DVGAVGSCE 897
Query: 1046 KRL 1048
++
Sbjct: 898 DKM 900
Score = 94 (38.1 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 26/67 (38%), Positives = 34/67 (50%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASK----FVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
F + DEAGQ T P ++ P++ +K VL GD QL +V S A + G IS
Sbjct: 942 FTHVLFDEAGQCTEPETMVPIVMLTKKRSQVVLSGDPRQLQSIVTSRIASKMGFSISFLE 1001
Query: 1127 RLSEEHP 1133
RL E P
Sbjct: 1002 RLLERSP 1008
Score = 43 (20.2 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 848 EISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW 881
E++ + ++ L PGRNS + ++VW
Sbjct: 518 EVAEAEKRMIAAEALMAPGRNSQERSRFYANQVW 551
Score = 42 (19.8 bits), Expect = 1.0e-17, Sum P(5) = 1.0e-17
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 593 MIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
+++ + ++++ NEING+ L K ++ +G S M+
Sbjct: 120 LMEEKMDQQLKANPNEINGV---LSNKIAELTHGLSEMD 155
>UNIPROTKB|Q7Z333 [details] [associations]
symbol:SETX "Probable helicase senataxin" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IC] [GO:0003678 "DNA helicase
activity" evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IDA] [GO:0032508 "DNA duplex
unwinding" evidence=TAS] InterPro:IPR026121 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0008219 GO:GO:0006396 GO:GO:0006302 Orphanet:803
eggNOG:COG1112 GO:GO:0003678 KO:K10706 EMBL:AL159997 Orphanet:64753
EMBL:AY362728 EMBL:BX537849 EMBL:BX538166 EMBL:CR749249
EMBL:AL353701 EMBL:BC032600 EMBL:BC032622 EMBL:BC078166
EMBL:BC106017 EMBL:BC137350 EMBL:AB014525 EMBL:AK001456
EMBL:AK022902 IPI:IPI00142538 IPI:IPI00646645 IPI:IPI00719643
RefSeq:NP_055861.3 UniGene:Hs.460317 ProteinModelPortal:Q7Z333
SMR:Q7Z333 IntAct:Q7Z333 STRING:Q7Z333 PhosphoSite:Q7Z333
DMDM:296453021 PaxDb:Q7Z333 PRIDE:Q7Z333 Ensembl:ENST00000224140
Ensembl:ENST00000372169 Ensembl:ENST00000393220
Ensembl:ENST00000436441 GeneID:23064 KEGG:hsa:23064 UCSC:uc004cbj.3
UCSC:uc004cbk.3 UCSC:uc010mzt.3 CTD:23064 GeneCards:GC09M135136
HGNC:HGNC:445 HPA:HPA024105 MIM:602433 MIM:606002 MIM:608465
neXtProt:NX_Q7Z333 PharmGKB:PA24751 HOVERGEN:HBG108476
InParanoid:Q7Z333 OMA:RLINHFE OrthoDB:EOG4XWFWX PhylomeDB:Q7Z333
ChiTaRS:SETX GenomeRNAi:23064 NextBio:44145 ArrayExpress:Q7Z333
Bgee:Q7Z333 Genevestigator:Q7Z333 GermOnline:ENSG00000107290
PANTHER:PTHR10887:SF15 Uniprot:Q7Z333
Length = 2677
Score = 260 (96.6 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 93/293 (31%), Positives = 142/293 (48%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K +LVGD QLPP V S +A+E G + S+ F
Sbjct: 2175 FSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFC 2234
Query: 1127 RLSEEHPQ-------AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
RL EE+ + I L QYRM I + +Y L A I+ S
Sbjct: 2235 RLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRNLKTNRQTEA---IRCS-- 2289
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---EI 1236
S W P +P + D+ E +D+ + N E L+ +I + L+K+ ++
Sbjct: 2290 ---SDW------PFQPYLVF--DVGDGSERRDNDSYINVQEIKLVMEIIK-LIKDKRKDV 2337
Query: 1237 EGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
++IGIIT Y +Q +I+ L E+ T+D +QGR KDC++V+ VR+ N
Sbjct: 2338 SFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRA--NSI 2395
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
+ L R+NV +TRAK L ++G RTL + LI ++ I+
Sbjct: 2396 QGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAII 2448
Score = 58 (25.5 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALL 985
+ N+DQ++AI ++ LI G PGTGK+ T+V + LL
Sbjct: 1932 RDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLL 1981
Score = 53 (23.7 bits), Expect = 2.0e-17, Sum P(3) = 2.0e-17
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 33 TQNSSKNVDVSSFPQNPNS---DLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENT 89
TQN +++D+ S +N N +LIH + SV R +S K + LE T
Sbjct: 1499 TQNDPEDMDLCSQMENDNYKLIELIHGKDTVEVEEDSVSRPQLESLSGTKCKYKDCLETT 1558
Score = 53 (23.7 bits), Expect = 1.9e-15, Sum P(4) = 1.9e-15
Identities = 33/117 (28%), Positives = 54/117 (46%)
Query: 964 LILGMPGTGKTSTMVHAVKALLM----RGAS------------ILLTSYTNSAVDNLLIK 1007
LI G PGTGK+ T+V + LL +G S +L+ + +N+AVD L+ K
Sbjct: 1960 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2019
Query: 1008 L----KSQ------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRL 1048
+ K + I+ VR+G + ++ E+ K L + +N +KK L
Sbjct: 2020 IILEFKEKCKDKKNPLGNCGDINLVRLGPEKSINSEVLKFSLDSQ-VN--HRMKKEL 2073
Score = 47 (21.6 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+ H V+ +T+ +I F+ K ++G ++ IV
Sbjct: 56 FLHEVLWELETLRLINHFEKSMKAEIGDDDELYIV 90
Score = 42 (19.8 bits), Expect = 3.6e-15, Sum P(3) = 3.6e-15
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 240 GICMLLTILEEQAMDSLLLGSDKQN-DFMQ 268
Score = 41 (19.5 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 508 EEYARLVLQKNIESLYACGVNENDIHKTLVEAI 540
EE + Q + E + C END +K L+E I
Sbjct: 1492 EEDNLFLTQNDPEDMDLCSQMENDNYK-LIELI 1523
Score = 40 (19.1 bits), Expect = 7.6e-16, Sum P(4) = 7.6e-16
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 521 SLYACGV--NENDIHKTLVEAIPK---MLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
SL GV ++N K+ +PK + N ++ + N +F DG + + +E
Sbjct: 842 SLDPSGVLDDKNGEQKSQNNVLPKEKQLKNEELVIFSFHENNCKIQEFHVDGKELIPFTE 901
Query: 576 VTDIEEMAWAP 586
+T+ E +P
Sbjct: 902 MTNASEKKSSP 912
>UNIPROTKB|D4AEB3 [details] [associations]
symbol:Setx "Protein Setx" species:10116 "Rattus
norvegicus" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] InterPro:IPR026121 RGD:1565575 GO:GO:0005737
GO:GO:0005654 GO:GO:0006302 KO:K10706 GeneTree:ENSGT00580000081652
CTD:23064 OMA:RLINHFE OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15
IPI:IPI00476851 RefSeq:XP_342401.3 ProteinModelPortal:D4AEB3
PRIDE:D4AEB3 Ensembl:ENSRNOT00000017984 GeneID:362096
KEGG:rno:362096 NextBio:678646 ArrayExpress:D4AEB3 Uniprot:D4AEB3
Length = 2647
Score = 258 (95.9 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 90/274 (32%), Positives = 136/274 (49%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K VLVGD QLPP V S +A+E G + S+ F
Sbjct: 2152 FSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFC 2211
Query: 1127 RLSEEHPQA-----ISALQS--QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L EE+ + + LQ QYRM I + +Y L ++++
Sbjct: 2212 KLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTN---------RLTET 2262
Query: 1180 SSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---E 1235
CS W P +P + D+ E +D+ + N E L+ +I + L+K +
Sbjct: 2263 IRCSSEW------PFQPYLVF--DVGDGSEQRDNDSYINVQEIKLVMEIIK-LIKEKRKD 2313
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
I ++IGIIT Y +Q +I+ L E+ T+D +QGR KDCI+V+ VR+S
Sbjct: 2314 ISFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQ 2373
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ L R+NV +TRAK L ++G RTL
Sbjct: 2374 GSI--GFLASLQRLNVTITRAKYSLFILGHLRTL 2405
Score = 61 (26.5 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALL 985
K N+DQ++AI ++ LI G PGTGK+ T+V + LL
Sbjct: 1909 KDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLL 1958
Score = 53 (23.7 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 595 DASIRVKIESKRNEINGMILPLEFKTGKIPNGQS-SMEHRAQVILYTL-LMSERYLKHID 652
+ S++V +ES+ NE+ + LE G++P+ + ++ QV L + L+S+ +
Sbjct: 904 EGSVKVAVESRDNEMRVLTSNLE---GQVPHDSNKALVAGPQVDLCNITLISQTTVIQFP 960
Query: 653 SGL 655
SGL
Sbjct: 961 SGL 963
Score = 52 (23.4 bits), Expect = 9.3e-16, Sum P(4) = 9.3e-16
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 964 LILGMPGTGKTSTMVHAVKALLM----RGAS------------ILLTSYTNSAVDNLLIK 1007
LI G PGTGK+ T+V + LL +G S +L+ + +N+AVD L+ K
Sbjct: 1937 LIHGPPGTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1996
Query: 1008 L 1008
+
Sbjct: 1997 I 1997
Score = 42 (19.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 240 GICMLLTILEEQAMDSLLLGSDKQN-DFMQ 268
Score = 41 (19.5 bits), Expect = 1.2e-16, Sum P(4) = 1.2e-16
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEM 746
HL + ++W+ LI LE E+
Sbjct: 1758 HLRKFPADYKKYWEFLIYLEESEL 1781
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(4) = 1.8e-16
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 793 VRQHMPSPNLNASDGDSLIGAAIPTKDMD-CTLRSGDYVILSTESD 837
VR P + + D D+L +DMD C+ I+ D
Sbjct: 1465 VRAAEPESSSDTDDDDNLFLTQHDPQDMDLCSQLENSKAIIVAHKD 1510
>CGD|CAL0006154 [details] [associations]
symbol:orf19.6199 species:5476 "Candida albicans" [GO:0043141
"ATP-dependent 5'-3' DNA helicase activity" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005658 "alpha DNA
polymerase:primase complex" evidence=IEA] [GO:0033203 "DNA helicase
A complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR004483 SMART:SM00382
CGD:CAL0006154 GO:GO:0005524 GO:GO:0003677 GO:GO:0017111
eggNOG:COG1112 InterPro:IPR014001 SMART:SM00487 EMBL:AACQ01000038
EMBL:AACQ01000037 TIGRFAMs:TIGR00376 RefSeq:XP_718706.1
RefSeq:XP_718790.1 ProteinModelPortal:Q5AAW1 STRING:Q5AAW1
GeneID:3639532 GeneID:3639630 KEGG:cal:CaO19.13579
KEGG:cal:CaO19.6199 Uniprot:Q5AAW1
Length = 719
Score = 181 (68.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 60/233 (25%), Positives = 119/233 (51%)
Query: 1112 STEARENGMEISLFRRLSEE-HPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEI 1169
S+ + + + +LF RL + H + L QYRM + IM+ + +Y ++L C D +
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKC-DDSV 517
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIF-VNTDMLPAY--EAKDHQTLNNPVEACLIAK 1226
+I + DL + + C + + P E+ D + N +E ++
Sbjct: 518 R--EISLVDLPGVEI-NDDTMTKC--IWYDTQGGEFPEQISESIDGDSKYNDMELLVVKG 572
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-----SS--------VEIHTIDKYQG 1273
++L+ + ++ +DIG+I PY++Q ++ + + SS +EI T+D +QG
Sbjct: 573 HIKKLLSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQG 632
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
R+K+ I+++ VRS+++ R L + R+NVA+TR K++L +VG +++
Sbjct: 633 REKEVIILTLVRSNDS-REI--GFLSEQRRLNVAMTRPKRQLCVVGDLELMNQ 682
Score = 167 (63.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 71/323 (21%), Positives = 145/323 (44%)
Query: 966 LGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVH 1025
+G P + H+++ L ++ N + ++L K+K + G + ++
Sbjct: 297 IGHPARLLMKNLQHSLEILSKTYGRDIINEILND-IQSVLTKIKKCK----KYGERKALY 351
Query: 1026 KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLG-----ITNPLLTDKK----FDVCIM 1076
E+ K + + + + L Q +VV T G + N + T+ FD I+
Sbjct: 352 SEL-KLLKKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIII 410
Query: 1077 DEAGQTTLPVSLGPLMFASKF---VLVGDHYQLPPLVQSTEARENG----------MEIS 1123
DE Q+ P PL+ +++F V+ GD+ QLPP +++ ++ + + +
Sbjct: 411 DEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATT 470
Query: 1124 LFRRLSEE-HPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
LF RL + H + L QYRM + IM+ + +Y ++L C D + +I + DL
Sbjct: 471 LFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKC-DDSVR--EISLVDLPG 527
Query: 1182 CSPWLKEALNPCRPVIFVNTD--MLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
+ + C I+ +T P E+ D + N +E ++ ++L+ + ++
Sbjct: 528 VEI-NDDTMTKC---IWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ 583
Query: 1238 GKDIGIITPYNSQANLIRHSLSV 1260
+DIG+I PY++Q ++ + +
Sbjct: 584 PQDIGVIAPYSAQVQNLKKQMGL 606
Score = 126 (49.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN QR+AI + + +I G PGTGKT T++ ++ L +G +L+ +N +VD +
Sbjct: 222 LNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTI 281
Query: 1005 LIKL--KSQSIDFVRIGRH-EVVHKEIQKHCLSAMN 1037
L +L K + + +RIG ++ K +Q H L ++
Sbjct: 282 LERLGDKYEPMKLIRIGHPARLLMKNLQ-HSLEILS 316
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 253 LRHTKKVLLQTYDFDDIHCLLL-INSIL 279
L+H+ ++L +TY D I+ +L I S+L
Sbjct: 308 LQHSLEILSKTYGRDIINEILNDIQSVL 335
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 63 PPFSVYRNPSDSAPSKKNSPQSALENTPPDNIL 95
PP + + S+PS +S S L T D ++
Sbjct: 444 PPTIKTQKSNSSSPSSSSSSASILATTLFDRLM 476
Score = 38 (18.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 528 NENDIHKTLV---EAIPK 542
++NDIHK L+ + IPK
Sbjct: 186 DKNDIHKILLGESQYIPK 203
>UNIPROTKB|Q5AAW1 [details] [associations]
symbol:HCS1 "Putative uncharacterized protein HCS1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR004483 SMART:SM00382 CGD:CAL0006154 GO:GO:0005524
GO:GO:0003677 GO:GO:0017111 eggNOG:COG1112 InterPro:IPR014001
SMART:SM00487 EMBL:AACQ01000038 EMBL:AACQ01000037
TIGRFAMs:TIGR00376 RefSeq:XP_718706.1 RefSeq:XP_718790.1
ProteinModelPortal:Q5AAW1 STRING:Q5AAW1 GeneID:3639532
GeneID:3639630 KEGG:cal:CaO19.13579 KEGG:cal:CaO19.6199
Uniprot:Q5AAW1
Length = 719
Score = 181 (68.8 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 60/233 (25%), Positives = 119/233 (51%)
Query: 1112 STEARENGMEISLFRRLSEE-HPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEI 1169
S+ + + + +LF RL + H + L QYRM + IM+ + +Y ++L C D +
Sbjct: 459 SSSSSASILATTLFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKC-DDSV 517
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIF-VNTDMLPAY--EAKDHQTLNNPVEACLIAK 1226
+I + DL + + C + + P E+ D + N +E ++
Sbjct: 518 R--EISLVDLPGVEI-NDDTMTKC--IWYDTQGGEFPEQISESIDGDSKYNDMELLVVKG 572
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-----SS--------VEIHTIDKYQG 1273
++L+ + ++ +DIG+I PY++Q ++ + + SS +EI T+D +QG
Sbjct: 573 HIKKLLSSGVQPQDIGVIAPYSAQVQNLKKQMGLGGEVGSSANGDKDGQIEISTVDGFQG 632
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
R+K+ I+++ VRS+++ R L + R+NVA+TR K++L +VG +++
Sbjct: 633 REKEVIILTLVRSNDS-REI--GFLSEQRRLNVAMTRPKRQLCVVGDLELMNQ 682
Score = 167 (63.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 71/323 (21%), Positives = 145/323 (44%)
Query: 966 LGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVH 1025
+G P + H+++ L ++ N + ++L K+K + G + ++
Sbjct: 297 IGHPARLLMKNLQHSLEILSKTYGRDIINEILND-IQSVLTKIKKCK----KYGERKALY 351
Query: 1026 KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLG-----ITNPLLTDKK----FDVCIM 1076
E+ K + + + + L Q +VV T G + N + T+ FD I+
Sbjct: 352 SEL-KLLKKELRQRERKIVNELLVQAQVVVATLHGSGSYELKNSVGTNNNEGIVFDTIII 410
Query: 1077 DEAGQTTLPVSLGPLMFASKF---VLVGDHYQLPPLVQSTEARENG----------MEIS 1123
DE Q+ P PL+ +++F V+ GD+ QLPP +++ ++ + + +
Sbjct: 411 DEVSQSLEPQCWIPLLLSNRFKRLVIAGDNMQLPPTIKTQKSNSSSPSSSSSSASILATT 470
Query: 1124 LFRRLSEE-HPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
LF RL + H + L QYRM + IM+ + +Y ++L C D + +I + DL
Sbjct: 471 LFDRLMKHCHGEKYKKLLDVQYRMNKSIMQFPSMQLYDNQLKC-DDSVR--EISLVDLPG 527
Query: 1182 CSPWLKEALNPCRPVIFVNTD--MLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
+ + C I+ +T P E+ D + N +E ++ ++L+ + ++
Sbjct: 528 VEI-NDDTMTKC---IWYDTQGGEFPEQISESIDGDSKYNDMELLVVKGHIKKLLSSGVQ 583
Query: 1238 GKDIGIITPYNSQANLIRHSLSV 1260
+DIG+I PY++Q ++ + +
Sbjct: 584 PQDIGVIAPYSAQVQNLKKQMGL 606
Score = 126 (49.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN QR+AI + + +I G PGTGKT T++ ++ L +G +L+ +N +VD +
Sbjct: 222 LNASQRQAIDFAINDSNITIIHGPPGTGKTYTLIELIQQLTSKGEKVLVCGPSNISVDTI 281
Query: 1005 LIKL--KSQSIDFVRIGRH-EVVHKEIQKHCLSAMN 1037
L +L K + + +RIG ++ K +Q H L ++
Sbjct: 282 LERLGDKYEPMKLIRIGHPARLLMKNLQ-HSLEILS 316
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 253 LRHTKKVLLQTYDFDDIHCLLL-INSIL 279
L+H+ ++L +TY D I+ +L I S+L
Sbjct: 308 LQHSLEILSKTYGRDIINEILNDIQSVL 335
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 63 PPFSVYRNPSDSAPSKKNSPQSALENTPPDNIL 95
PP + + S+PS +S S L T D ++
Sbjct: 444 PPTIKTQKSNSSSPSSSSSSASILATTLFDRLM 476
Score = 38 (18.4 bits), Expect = 1.2e-16, Sum P(3) = 1.2e-16
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 528 NENDIHKTLV---EAIPK 542
++NDIHK L+ + IPK
Sbjct: 186 DKNDIHKILLGESQYIPK 203
>UNIPROTKB|F1RMM8 [details] [associations]
symbol:LOC100519780 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004540
"ribonuclease activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001900 InterPro:IPR003593
InterPro:IPR026855 Pfam:PF00773 PROSITE:PS50103 SMART:SM00382
SMART:SM00955 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0004540 InterPro:IPR022966 PROSITE:PS01175
OMA:FRAAHIM PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:FP102633 Ensembl:ENSSSCT00000003670 Uniprot:F1RMM8
Length = 2879
Score = 249 (92.7 bits), Expect = 1.4e-16, Sum P(4) = 1.4e-16
Identities = 93/321 (28%), Positives = 156/321 (48%)
Query: 1041 VEEIKK-RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS---K 1096
++E +K +D+ +V+ TC + L D ++DEAG + P +L PL+ S K
Sbjct: 2555 LQEARKFEVDRHRVLLCTCSCAASASLRDVNIRQILVDEAGLASEPETLIPLVSFSQVEK 2614
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
VL+GDH QL P+V+S + + G++ SL +R + S L QY + + I +
Sbjct: 2615 VVLLGDHKQLRPVVKSEQLQNLGLDRSLLQRYRRD----ASMLDLQYCVHESICAFPSME 2670
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
Y +L I +CS + +P ++ V+T+ E +++ +N
Sbjct: 2671 FYKKKLKTWQGLRLPPSILGYGKENCSVIFGDVQSPEESLV-VSTE-----EGRENSKVN 2724
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSSVEIHTIDKYQG 1273
+A L+ + ++LV ++ KD+ I+TPY++Q I L V+ V + +I K QG
Sbjct: 2725 KE-QAALVVCLAKQLVSGRVDPKDMAILTPYHAQVLEISKRLEEARVAGVTVCSITKSQG 2783
Query: 1274 RDKDCILVSFVRSSENP----RNCTSSL---LG---DWHRINVALTRAKKKLIMVGSCRT 1323
R +LVS VR+ + R S L LG D +++NVALTRA++ L +VG
Sbjct: 2784 RQWRYVLVSTVRTCQESDLDLRPTKSWLQKSLGFLVDPNQVNVALTRAQEGLWVVGDRLL 2843
Query: 1324 LSKVPLLKLLINKVGEQSGIL 1344
L PL ++ Q I+
Sbjct: 2844 LRCCPLWSRFLDFCEAQKSIV 2864
Score = 64 (27.6 bits), Expect = 1.4e-16, Sum P(4) = 1.4e-16
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
LN Q A+ + L K + +I G PGTGKT +H
Sbjct: 2385 LNPSQNTAVREALK-KQFTVIHGPPGTGKTVVGLH 2418
Score = 62 (26.9 bits), Expect = 1.4e-16, Sum P(4) = 1.4e-16
Identities = 25/103 (24%), Positives = 43/103 (41%)
Query: 74 SAPSKKNSPQ---SALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGG 130
+ P K SP S LE P ++ D H PE+ + + + + ++
Sbjct: 317 AVPRKHRSPPAGLSTLERCPRPDLCEFGDMCTKAHSEPELQEWTQRARTVALR------- 369
Query: 131 DEVTWN--ISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIH 171
++ W + P RLLA Q + VLA + L+ ++IH
Sbjct: 370 EQAAWRDGLVPYQARLLA-EYQRSSSQVLVLAET--LDGVSIH 409
Score = 39 (18.8 bits), Expect = 1.4e-16, Sum P(4) = 1.4e-16
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
R ++F RQH+ S + +GA + T+
Sbjct: 1891 RLCHYFTRQHVRSRRYERRVRNLHLGARLKTQ 1922
>TAIR|locus:2166183 [details] [associations]
symbol:AT5G37160 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00521499 RefSeq:NP_198532.1 UniGene:At.55177
ProteinModelPortal:F4K5W6 SMR:F4K5W6 PRIDE:F4K5W6
EnsemblPlants:AT5G37160.1 GeneID:833689 KEGG:ath:AT5G37160
OMA:WAELISE Uniprot:F4K5W6
Length = 871
Score = 218 (81.8 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 88/313 (28%), Positives = 140/313 (44%)
Query: 1032 CLSAMNINSVEEIKKR-LDQVKVVAVTCLGITN--PLLTDKKFDVCIMDEAGQTTLPVSL 1088
C + + E+I+K L ++ T + N P D+ ++DE Q S+
Sbjct: 519 CFGIFGLANNEDIRKFCLQNADIIFCTASSVANINPARIGS-VDLLVVDETAQLKECESV 577
Query: 1089 GPLMFAS--KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRM 1145
L +L+GD YQLP +V + E + SLF RL H + + L QYRM
Sbjct: 578 AALQLPGLCHALLIGDEYQLPAMVHNEECDKAKFGRSLFERLVLIGHSKHL--LNVQYRM 635
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP 1205
I N YG R++ + AN + + + +L+ N F+N
Sbjct: 636 HPSISRFPNKEFYGGRIT----DAANVQESIYE----KRFLQG--NMFGTFSFINVGR-G 684
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD---IGIITPYNSQANLIR------- 1255
E D + N VE +I+KI L K + K +G+I+PY Q I+
Sbjct: 685 KEEFGDGHSPKNMVEVAVISKIISNLFKVSSQRKQKMSVGVISPYKGQVRAIQERVGDKY 744
Query: 1256 HSLSVS---SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+SLSV ++ + ++D +QG + D I++S VR + N L + R NVALTRA+
Sbjct: 745 NSLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGN---VGFLSNRQRANVALTRAR 801
Query: 1313 KKLIMVGSCRTLS 1325
L ++G+ TL+
Sbjct: 802 HCLWVIGNGTTLA 814
Score = 79 (32.9 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKD------YALILGMPGTGKTSTMVHAVKALLM 986
D + I S K LN Q AI+ L ++ LI G PGTGKT T+ + L+
Sbjct: 233 DRVVDIIRSAK-LNSSQEAAILGFLKTRNCKHKESVKLIWGPPGTGKTKTVATLLSTLMQ 291
Query: 987 RGASILLTSYTNS---AVDNLLIKLKSQSI 1013
++ + TN+ AV + L+ L ++I
Sbjct: 292 LKCKTVVCAPTNTTIVAVASRLLSLSKETI 321
>UNIPROTKB|E1BAS6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:DAAA02032276 EMBL:DAAA02032274 EMBL:DAAA02032275
IPI:IPI00842535 Ensembl:ENSBTAT00000042924 Uniprot:E1BAS6
Length = 2662
Score = 261 (96.9 bits), Expect = 2.3e-16, Sum P(4) = 2.3e-16
Identities = 89/274 (32%), Positives = 139/274 (50%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K VLVGD QLPP V S +A++ G + S+ F
Sbjct: 2165 FSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISVKAQDYGYDQSMMARFH 2224
Query: 1127 RLSEEHPQ-----AISALQS--QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L EE + + LQ QYRM I ++ IY D I + ++
Sbjct: 2225 KLLEESVEHNMIGRLPVLQLTIQYRMHPDICLFPSSYIY--------DGILRTN-RGTET 2275
Query: 1180 SSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---E 1235
S CS W P +P + D+ E +D+ + N E L+ ++ + L+K+ +
Sbjct: 2276 SRCSSDW------PFQPYLVF--DVGDGLERRDNDSYVNVQEIKLVMELIK-LIKDKRRD 2326
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ ++IGIIT Y +Q +I+ L + E+ T+D +QGR KDC++V+ VR+ N
Sbjct: 2327 VTFRNIGIITHYKAQKTMIQKDLDKEFDRKGAAEVDTVDAFQGRQKDCVIVTCVRA--NA 2384
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ L R+NV +TRAK L ++G RTL
Sbjct: 2385 TQGSIGFLASLQRLNVTITRAKYSLFILGHLRTL 2418
Score = 64 (27.6 bits), Expect = 2.3e-16, Sum P(4) = 2.3e-16
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALLM----RGAS- 990
K N+DQ++AI ++ LI G PGTGK+ T+V + LL RG S
Sbjct: 1922 KDFNEDQKKAIETACAMVKHSPSVAKICLIHGPPGTGKSKTIVGILYRLLTENQRRGYSD 1981
Query: 991 -----------ILLTSYTNSAVDNLLIKL 1008
+L+ + +N+AVD L+ K+
Sbjct: 1982 ENSNAKIKQNRVLVCAPSNAAVDELMKKI 2010
Score = 46 (21.3 bits), Expect = 2.3e-16, Sum P(4) = 2.3e-16
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+ H V+ +T+ +I F+ K ++G ++ IV
Sbjct: 56 FLHEVLWELETLRLINHFERSMKAEIGDDDELYIV 90
Score = 45 (20.9 bits), Expect = 2.9e-16, Sum P(4) = 2.9e-16
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 59 SPNC--PPFSVYRNPSDSAPSKKNSPQSALENTPP 91
+P C PP S Y+ S+ K LEN+ P
Sbjct: 609 NPACKMPPAS-YKEESEQIGKKSEKDVHCLENSSP 642
Score = 42 (19.8 bits), Expect = 3.7e-14, Sum P(4) = 3.7e-14
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 240 GICMLLTILEEQAMDSLLLGSDKQN-DFMQ 268
Score = 41 (19.5 bits), Expect = 4.7e-14, Sum P(4) = 4.7e-14
Identities = 18/75 (24%), Positives = 35/75 (46%)
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
S K+L ++ + +K+ T K ++ T + T+ + + + RG I T S+
Sbjct: 695 SSKNLACERVQNQVKISTGKYKSVKENSSCTPQNGTLRNGPEKVFDRGIIISRRLLTVSS 754
Query: 1001 VDNLLIKLKSQSIDF 1015
D+L K+ + DF
Sbjct: 755 TDSLE-KVSASDEDF 768
Score = 39 (18.8 bits), Expect = 2.3e-16, Sum P(4) = 2.3e-16
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1013 IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRL 1048
I+ VR+G + ++ E+ K L + +N +KK L
Sbjct: 2031 INLVRLGPEKSINNEVLKFSLDSQ-VN--HRMKKDL 2063
>GENEDB_PFALCIPARUM|MAL7P1.12 [details] [associations]
symbol:MAL7P1.12 "erythrocyte
membrane-associated antigen" species:5833 "Plasmodium falciparum"
[GO:0016020 "membrane" evidence=ISS] GO:GO:0016020
InterPro:IPR014001 SMART:SM00487 EMBL:AL844506
RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35 IntAct:Q8IC35
MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA GeneID:2655186
KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 264 (98.0 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 93/302 (30%), Positives = 150/302 (49%)
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL-MFASKFVL 1099
+E +KK VV TC+G + + ++KF+ I+DE Q+ P +L PL + + VL
Sbjct: 1894 LEAVKK----YNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPLGHYCNNLVL 1949
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
+GDH QLPP + S +A + G++ SL R + L +Q RM I N Y
Sbjct: 1950 IGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYD 2009
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP-CRPVIFVNTDM-LPAYEAKD-HQTLN 1216
++L + N I L W NP CR + F++ + P + ++ + T
Sbjct: 2010 NKLKTANVTEENRPIIKGFL-----WP----NPKCR-LAFIDVSIGKPGSKFENAYGTSK 2059
Query: 1217 -NPVEACLIAKITQELVKNE--IEGKDIGIITPYNSQA----NLIRHSLSVSS---VEIH 1266
N E + + + ++ NE + +IGI+T Y++Q ++ + S + +EI
Sbjct: 2060 FNLYEIEPLITVLKSII-NEGCVSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEID 2118
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ID +QG++KD IL S VRS+ N L D R+NV LTRAK+ +I+ G TL+
Sbjct: 2119 SIDGFQGKEKDLILFSAVRSNANNE---LGFLRDARRLNVMLTRAKRGVILFGDQFTLAN 2175
Query: 1327 VP 1328
P
Sbjct: 2176 DP 2177
Score = 152 (58.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVD 1002
LND Q+ A + LT + L+ G PGTGKT + + + ++ IL + +N A +
Sbjct: 1777 LNDSQKLACLSALTRR-LTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAAN 1835
Query: 1003 NLLIKLKSQSIDFVRIGR------HEVVHKEIQKHC----LSAMNINSVEEIKKRL---D 1049
NL+ LK ++I VR+G HE E ++ L N+ ++ K L +
Sbjct: 1836 NLVEGLKKRNIQAVRVGAGSDSDFHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLE 1895
Query: 1050 QVK---VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
VK VV TC+G + + ++KF+ I+DE Q+ P +L PL
Sbjct: 1896 AVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPL 1940
Score = 55 (24.4 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASIL-LTSYTNSAVD- 1002
ND + +II T + ++ G T K S V K LL ++ S+L L T ++
Sbjct: 817 NDKIKYSIIWSFTNDEKIVVYGTHNTKKLSKKVCVKKILLKLKNISLLELDQMTKWMINS 876
Query: 1003 -NLLIKLKSQSID 1014
N+++K+++++++
Sbjct: 877 LNVILKVENKNLE 889
Score = 37 (18.1 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 7/41 (17%), Positives = 22/41 (53%)
Query: 769 SSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
SS +L+ N + + ++N Y++ ++ + N ++ ++
Sbjct: 343 SSKILEDPNSYNNALKNNDSRYNYYNENFTNNIKNVNNANT 383
Score = 37 (18.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 9 SSRKLQSSQPQPTKFG-IQHFFDRHT--QNSSKNVDVSSFPQNPN 50
+ K +Q F + + + HT N++ N +V S+ +N N
Sbjct: 1009 NQNKFNKNQGANKNFNELMYNNNNHTASSNNNNNNNVLSYQENKN 1053
>UNIPROTKB|Q8IC35 [details] [associations]
symbol:MAL7P1.12 "Erythrocyte membrane-associated antigen"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016020 InterPro:IPR014001 SMART:SM00487
EMBL:AL844506 RefSeq:XP_001348968.1 ProteinModelPortal:Q8IC35
IntAct:Q8IC35 MINT:MINT-1611439 EnsemblProtists:MAL7P1.12:mRNA
GeneID:2655186 KEGG:pfa:MAL7P1.12 EuPathDB:PlasmoDB:PF3D7_0703500
HOGENOM:HOG000283891 ProtClustDB:CLSZ2433351 Uniprot:Q8IC35
Length = 2283
Score = 264 (98.0 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 93/302 (30%), Positives = 150/302 (49%)
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL-MFASKFVL 1099
+E +KK VV TC+G + + ++KF+ I+DE Q+ P +L PL + + VL
Sbjct: 1894 LEAVKK----YNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPLGHYCNNLVL 1949
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
+GDH QLPP + S +A + G++ SL R + L +Q RM I N Y
Sbjct: 1950 IGDHKQLPPTIISPDAIKLGLDKSLLERFVMAKIAPVHLLNTQRRMHLSICVFPNFHFYD 2009
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP-CRPVIFVNTDM-LPAYEAKD-HQTLN 1216
++L + N I L W NP CR + F++ + P + ++ + T
Sbjct: 2010 NKLKTANVTEENRPIIKGFL-----WP----NPKCR-LAFIDVSIGKPGSKFENAYGTSK 2059
Query: 1217 -NPVEACLIAKITQELVKNE--IEGKDIGIITPYNSQA----NLIRHSLSVSS---VEIH 1266
N E + + + ++ NE + +IGI+T Y++Q ++ + S + +EI
Sbjct: 2060 FNLYEIEPLITVLKSII-NEGCVSVDEIGILTAYDAQKMKLKKAVQDAFSYEASHRIEID 2118
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ID +QG++KD IL S VRS+ N L D R+NV LTRAK+ +I+ G TL+
Sbjct: 2119 SIDGFQGKEKDLILFSAVRSNANNE---LGFLRDARRLNVMLTRAKRGVILFGDQFTLAN 2175
Query: 1327 VP 1328
P
Sbjct: 2176 DP 2177
Score = 152 (58.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVD 1002
LND Q+ A + LT + L+ G PGTGKT + + + ++ IL + +N A +
Sbjct: 1777 LNDSQKLACLSALTRR-LTLVQGPPGTGKTHVACAIIDSWHKQNSNKKILAVADSNVAAN 1835
Query: 1003 NLLIKLKSQSIDFVRIGR------HEVVHKEIQKHC----LSAMNINSVEEIKKRL---D 1049
NL+ LK ++I VR+G HE E ++ L N+ ++ K L +
Sbjct: 1836 NLVEGLKKRNIQAVRVGAGSDSDFHEEAIMEFHRYKDLLKLRKNNMQKEAKVMKALLFLE 1895
Query: 1050 QVK---VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
VK VV TC+G + + ++KF+ I+DE Q+ P +L PL
Sbjct: 1896 AVKKYNVVIATCVGSGHEIFDNEKFERVIIDECAQSIEPSNLIPL 1940
Score = 55 (24.4 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASIL-LTSYTNSAVD- 1002
ND + +II T + ++ G T K S V K LL ++ S+L L T ++
Sbjct: 817 NDKIKYSIIWSFTNDEKIVVYGTHNTKKLSKKVCVKKILLKLKNISLLELDQMTKWMINS 876
Query: 1003 -NLLIKLKSQSID 1014
N+++K+++++++
Sbjct: 877 LNVILKVENKNLE 889
Score = 37 (18.1 bits), Expect = 3.9e-16, Sum P(3) = 3.9e-16
Identities = 7/41 (17%), Positives = 22/41 (53%)
Query: 769 SSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
SS +L+ N + + ++N Y++ ++ + N ++ ++
Sbjct: 343 SSKILEDPNSYNNALKNNDSRYNYYNENFTNNIKNVNNANT 383
Score = 37 (18.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 9 SSRKLQSSQPQPTKFG-IQHFFDRHT--QNSSKNVDVSSFPQNPN 50
+ K +Q F + + + HT N++ N +V S+ +N N
Sbjct: 1009 NQNKFNKNQGANKNFNELMYNNNNHTASSNNNNNNNVLSYQENKN 1053
>UNIPROTKB|Q81NI5 [details] [associations]
symbol:BAS2982 "Conserved domain protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR RefSeq:NP_845517.1 RefSeq:YP_019848.1
RefSeq:YP_029239.1 ProteinModelPortal:Q81NI5 IntAct:Q81NI5
DNASU:1087476 EnsemblBacteria:EBBACT00000012886
EnsemblBacteria:EBBACT00000015522 EnsemblBacteria:EBBACT00000022854
GeneID:1087476 GeneID:2817117 GeneID:2850799 KEGG:ban:BA_3207
KEGG:bar:GBAA_3207 KEGG:bat:BAS2982 HOGENOM:HOG000093512
OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 210 (79.0 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 92/364 (25%), Positives = 165/364 (45%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
G L T + ++ K+ S D R+ + + +++K I VE K+
Sbjct: 259 GEERLYLEETRQELREKILSYKATSADKKRM---QEIESDLRKQ---RAKIKEVE--KEY 310
Query: 1048 LDQVKVVAVTCLGIT-NPLLTDKKFDVCIMDEAGQTTLP-VSLGPLMFASKFVLVGDHYQ 1105
++ KV+ T + L+ ++ FD+ ++DE +P ++L + + V+ GD Q
Sbjct: 311 IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASL-GKRIVVCGDFLQ 369
Query: 1106 LPPLVQST-EARENGMEISLFRRL--------SEEHPQAISALQSQYRMCQGIMELSNAL 1156
LPP+ + E + +F SE HP + LQ Q RM I + +N+
Sbjct: 370 LPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPN-LFMLQEQRRMHADISKFTNSF 428
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
IY +R+ ++ K +L+ P+ EA V+F +T + A+ KD + +
Sbjct: 429 IYKNRVY-DHPSVSERK----ELAQLQPFANEA-----SVLF-DTSQMGAFSLKDAASGS 477
Query: 1217 N-PVEACLIAKITQELVKNEIEG-KDIGIITPYNSQANL----IRHSLSVSSVE-----I 1265
+ + L+A Q ++ ++G + IGI+TPY +Q+ IR L + +
Sbjct: 478 RFNIMSGLVAM--QMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLA 535
Query: 1266 HTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW--HR-INVALTRAKKKLIMVGSCR 1322
T+ K+QG ++D ++ V S P+ L D HR +NVA+TRA+ K I + C
Sbjct: 536 ATVHKFQGSERDMMIFDTVDSY--PQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCH 593
Query: 1323 TLSK 1326
+ K
Sbjct: 594 YMCK 597
Score = 85 (35.0 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
+ G PGTGK+ + + A +G S+L+ +++N+AVD L+ ++ Q
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQ 216
Score = 44 (20.5 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 783 YRDNRFVYHFVRQ-HMP--SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
Y +V+ + + +P SP DG+ G + ++ L+ DY+
Sbjct: 48 YESTVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYI 98
>TIGR_CMR|BA_3207 [details] [associations]
symbol:BA_3207 "conserved domain protein" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
RefSeq:NP_845517.1 RefSeq:YP_019848.1 RefSeq:YP_029239.1
ProteinModelPortal:Q81NI5 IntAct:Q81NI5 DNASU:1087476
EnsemblBacteria:EBBACT00000012886 EnsemblBacteria:EBBACT00000015522
EnsemblBacteria:EBBACT00000022854 GeneID:1087476 GeneID:2817117
GeneID:2850799 KEGG:ban:BA_3207 KEGG:bar:GBAA_3207 KEGG:bat:BAS2982
HOGENOM:HOG000093512 OMA:EVSMAYV ProtClustDB:CLSK916959
BioCyc:BANT260799:GJAJ-3044-MONOMER
BioCyc:BANT261594:GJ7F-3148-MONOMER Uniprot:Q81NI5
Length = 759
Score = 210 (79.0 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 92/364 (25%), Positives = 165/364 (45%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
G L T + ++ K+ S D R+ + + +++K I VE K+
Sbjct: 259 GEERLYLEETRQELREKILSYKATSADKKRM---QEIESDLRKQ---RAKIKEVE--KEY 310
Query: 1048 LDQVKVVAVTCLGIT-NPLLTDKKFDVCIMDEAGQTTLP-VSLGPLMFASKFVLVGDHYQ 1105
++ KV+ T + L+ ++ FD+ ++DE +P ++L + + V+ GD Q
Sbjct: 311 IENAKVIGATLSKCAIDSLIYERTFDLVVVDEVSMAFVPQIALAASL-GKRIVVCGDFLQ 369
Query: 1106 LPPLVQST-EARENGMEISLFRRL--------SEEHPQAISALQSQYRMCQGIMELSNAL 1156
LPP+ + E + +F SE HP + LQ Q RM I + +N+
Sbjct: 370 LPPIAMANHELVRKWLGEDMFYHAGIVESVNKSEAHPN-LFMLQEQRRMHADISKFTNSF 428
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
IY +R+ ++ K +L+ P+ EA V+F +T + A+ KD + +
Sbjct: 429 IYKNRVY-DHPSVSERK----ELAQLQPFANEA-----SVLF-DTSQMGAFSLKDAASGS 477
Query: 1217 N-PVEACLIAKITQELVKNEIEG-KDIGIITPYNSQANL----IRHSLSVSSVE-----I 1265
+ + L+A Q ++ ++G + IGI+TPY +Q+ IR L + +
Sbjct: 478 RFNIMSGLVAM--QMMLIGLLDGVQSIGIVTPYRAQSRFLSTCIREMLQRTKYQNIPVLA 535
Query: 1266 HTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW--HR-INVALTRAKKKLIMVGSCR 1322
T+ K+QG ++D ++ V S P+ L D HR +NVA+TRA+ K I + C
Sbjct: 536 ATVHKFQGSERDMMIFDTVDSY--PQERPGVLFFDHKNHRLVNVAVTRARGKFIQLSDCH 593
Query: 1323 TLSK 1326
+ K
Sbjct: 594 YMCK 597
Score = 85 (35.0 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
+ G PGTGK+ + + A +G S+L+ +++N+AVD L+ ++ Q
Sbjct: 170 VWGPPGTGKSYNLSRIISAHYQKGKSVLVLAHSNAAVDVLMSEVTKQ 216
Score = 44 (20.5 bits), Expect = 4.6e-16, Sum P(3) = 4.6e-16
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 783 YRDNRFVYHFVRQ-HMP--SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
Y +V+ + + +P SP DG+ G + ++ L+ DY+
Sbjct: 48 YESTVYVFQLISEVSLPEGSPIRIEFDGEEATGEVLSVHGLEIELKLNDYI 98
>ZFIN|ZDB-GENE-070424-144 [details] [associations]
symbol:si:ch211-183d5.1 "si:ch211-183d5.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR026855 ZFIN:ZDB-GENE-070424-144
GO:GO:0004386 PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391
EMBL:AL935128 IPI:IPI00492493 Ensembl:ENSDART00000144897
Uniprot:F1QAI5
Length = 517
Score = 217 (81.4 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 92/345 (26%), Positives = 157/345 (45%)
Query: 1026 KEIQKHCLSAMNINSVEEIKKRLDQVK-----VVAVTCLGITNPLLTD-KKFDVCIMDEA 1079
K ++K+ LS I++ ++ K+ +Q + VV TC P L + F ++DE
Sbjct: 150 KALEKN-LSVDQIDNYRKLLKKANQHEIEKYDVVLCTCSSALKPELREVMDFRQILIDEC 208
Query: 1080 GQTTLPVSLGPLMFAS--KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
T P + PL+ + + VL+GDH Q+ P+VQ + GME SLF R + +
Sbjct: 209 AMATEPEAFIPLVSHNPQQIVLLGDHQQIRPIVQCGHVKNKGMEKSLFERYMD----LAN 264
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L +QYRM I + Y +L G++ + S + L + +
Sbjct: 265 MLDTQYRMHAEICSFPSDEFYDGKLKTGAERGPCCLLNKS--KEPTAMLFGHIEGKEVSL 322
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRH 1256
V+T E + ++ N EA + L+K + + I I+TPYN+Q + I+
Sbjct: 323 VVST------EKGNENSMANTEEAEQAVCVADLLIKQSGVSPEHIAILTPYNAQVSEIKM 376
Query: 1257 SL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN---------PRNC-TSSLLG---D 1300
+L +V +V + T+ K QG + ++VS VRS P LG D
Sbjct: 377 TLEKKNVRNVTVCTVMKSQGSEWPYVIVSTVRSCSTSDIQAYRVRPHKAWLGKRLGFVTD 436
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+++NVA+TRA+ L ++G+ L L L++ +S ++N
Sbjct: 437 ANQVNVAITRAQDGLCILGNSDLLRCCELWDRLLDHYYRKSCVVN 481
Score = 68 (29.0 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
N Q++A+ K K + +I G PGTGKT +H V + + TS+
Sbjct: 2 NMSQKKAV-KEAMKKPFTVIQGPPGTGKTVVGIHIVFQFFKKNKDFM-TSF 50
>UNIPROTKB|F1S0U6 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007623 "circadian rhythm" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR026121 GO:GO:0005737 GO:GO:0005654 GO:GO:0006302
KO:K10706 GeneTree:ENSGT00580000081652 CTD:23064 OMA:RLINHFE
PANTHER:PTHR10887:SF15 EMBL:CU550727 EMBL:CU914573
RefSeq:XP_003353743.1 UniGene:Ssc.45527 Ensembl:ENSSSCT00000006294
GeneID:100511239 KEGG:ssc:100511239 Uniprot:F1S0U6
Length = 2661
Score = 264 (98.0 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 93/294 (31%), Positives = 144/294 (48%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K VLVGD QLPP V S +A++ G + S+ F
Sbjct: 2169 FSCVIVDEAGQSCEVETLTPLIHRCNKLVLVGDPKQLPPTVISMKAQDYGYDQSMMARFY 2228
Query: 1127 RLSEEHPQ-------AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L EE+ + I L QYRM I + IY L S +++
Sbjct: 2229 KLLEENVEHNVIGRLPILQLTVQYRMHPDICLFPSNYIYNRNLKTNS---------LTEA 2279
Query: 1180 SSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---E 1235
S CS W P +P + D+ E +D+ + N E L+ +I + L+K+ +
Sbjct: 2280 SRCSSDW------PFQPYLVF--DVGDGSERRDNDSYVNVQEIKLVMEIIK-LIKDKRRD 2330
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ ++IGIIT Y +Q LI+ L E+ T+D +QGR KDC++V+ VR+ +
Sbjct: 2331 VTFRNIGIITHYKAQKTLIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRAKTSQ 2390
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
+ L R+NV +TRAK L ++G RTL + LI ++ I+
Sbjct: 2391 GSI--GFLASLQRLNVTITRAKYSLFILGHLRTLRENDHWNQLIEDAQKRGAII 2442
Score = 61 (26.5 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 27/89 (30%), Positives = 43/89 (48%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALLM----RGAS- 990
+ N+DQ++AI ++ LI G PGTGK+ T+V + LL RG S
Sbjct: 1926 RDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRRGHSD 1985
Query: 991 -----------ILLTSYTNSAVDNLLIKL 1008
+L+ + +N+AVD L+ K+
Sbjct: 1986 ENSNAKIKQNRVLVCAPSNAAVDELMKKI 2014
Score = 44 (20.5 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 758 GSGGNHFTGCLSSIVLDASNEHQKSYRDN 786
G G+ F LS+ +LD + QKS +DN
Sbjct: 831 GQKGDGFIHSLSNGILDDKHGEQKS-QDN 858
Score = 41 (19.5 bits), Expect = 1.8e-14, Sum P(3) = 1.8e-14
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 240 GICMLLTILEEQAMDSLLLGPDKQN-DFMQ 268
Score = 40 (19.1 bits), Expect = 1.4e-15, Sum P(4) = 1.4e-15
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 720 HIYHLTTAHCSFLRHWDRLIDLE----AKEMQVVKNEI 753
H HL + ++W+ ++ LE AK++ +N++
Sbjct: 1768 HQLHLRKFPADYKKYWEFVVYLEECELAKQLHPKENDL 1805
Score = 37 (18.1 bits), Expect = 5.7e-16, Sum P(4) = 5.7e-16
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 415 HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
H + +TV +I F+ K ++ ++ IV
Sbjct: 58 HETLWELETVRLINHFEKSMKAEIEDDDELYIV 90
>UNIPROTKB|J9P7Z9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:AAEX03011080 EMBL:AAEX03011081
Ensembl:ENSCAFT00000044224 Uniprot:J9P7Z9
Length = 983
Score = 183 (69.5 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 75/282 (26%), Positives = 127/282 (45%)
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL-----------SEEHPQAISALQSQYR 1144
+ VL GD QL P+++S +++G+ SL RL + +PQ I+ L YR
Sbjct: 654 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYR 713
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTD 1202
I+++ N L Y L +D + + C W E L P + P+IF
Sbjct: 714 SHPTILDIPNQLYYEGELQACADVVDRERF-------CH-W--EGL-PRQGFPIIFHGVM 762
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELV-------KNEIEGKDIGIITPYNSQANLIR 1255
E + NP EA + + L+ K + + +G+I+PY Q IR
Sbjct: 763 GKDEREGNS-PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIR 821
Query: 1256 HSLS-----------VSSVEIHTIDKYQGRDKDCILVSFVRSSEN----PRNCTSSLLGD 1300
H ++ + +++ +++++QG+++ IL+S VRSS++ + L +
Sbjct: 822 HCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKN 881
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R NVA+TRAK LI+VG+ L P K+ + E G
Sbjct: 882 PKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGG 923
Score = 111 (44.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A II T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 474 DRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 533
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A + V KK+L
Sbjct: 534 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGDYVFPAKKKL 593
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
+ +V+ +T L IT L +F + +DEAG + P SL
Sbjct: 594 QEYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHSMEPESL 636
>TAIR|locus:2166163 [details] [associations]
symbol:AT5G37140 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004519
KO:K10706 IPI:IPI00534313 RefSeq:NP_198530.1 UniGene:At.55175
ProteinModelPortal:F4K5W4 SMR:F4K5W4 PRIDE:F4K5W4
EnsemblPlants:AT5G37140.1 GeneID:833686 KEGG:ath:AT5G37140
OMA:TEAKYEH ArrayExpress:F4K5W4 Uniprot:F4K5W4
Length = 692
Score = 206 (77.6 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 86/294 (29%), Positives = 136/294 (46%)
Query: 1048 LDQVKVVAVTCLGIT--NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGDH 1103
L ++ T G NP+ T D+ ++DEA Q S+ L + VL+GD
Sbjct: 361 LQNADIIFCTASGAADMNPIRTGS-VDLLVVDEAAQLKECESVAALQLSGLRHAVLIGDE 419
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLP +V + EA+ SLF RL H + + L QYRM I N YG R+
Sbjct: 420 LQLPAMVHN-EAKFGR---SLFERLVLLGHNKHL--LNVQYRMHPSISRFPNKEFYGGRI 473
Query: 1163 SCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEAC 1222
+ AN + + +L+ N F+N E D + N VE
Sbjct: 474 K----DAANVQESIYQ----KRFLQG--NMFGSFSFINVGR-GEEEFGDGHSPKNMVEVA 522
Query: 1223 LIAKITQELVKNEIEGK---DIGIITPYNSQANLIRH-------SLS-VSSVEIHTIDKY 1271
+I++I L K E + +G+++PY Q I+ SLS + ++ + ++D +
Sbjct: 523 VISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFTLNVRSVDGF 582
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
QG ++D I++S VRS+ N + L + R NVALTRA+ L ++G+ TL+
Sbjct: 583 QGGEEDIIIISTVRSNGNGK---VGFLNNRQRANVALTRARHCLWVIGNETTLA 633
Score = 83 (34.3 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 29/92 (31%), Positives = 44/92 (47%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD------YALILGMPGTGKTSTMV 978
+SG+ D + I S K LN Q AI+ L ++ LI G PGTGKT T+
Sbjct: 56 ESGA-HGSDRVTNIIRSAK-LNSSQEAAILSCLKIRNCNHKHSVKLIWGPPGTGKTKTVA 113
Query: 979 HAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
+ LL ++ + TN+A+ + +L S
Sbjct: 114 TLLFCLLKLSCKTVVCAPTNTAIVEVTSRLLS 145
>UNIPROTKB|F1P7T4 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035279 "mRNA cleavage involved in gene
silencing by miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:AAEX03011080 EMBL:AAEX03011081 RefSeq:XP_540337.3
Ensembl:ENSCAFT00000021339 GeneID:483219 KEGG:cfa:483219
Uniprot:F1P7T4
Length = 1003
Score = 183 (69.5 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 75/282 (26%), Positives = 127/282 (45%)
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL-----------SEEHPQAISALQSQYR 1144
+ VL GD QL P+++S +++G+ SL RL + +PQ I+ L YR
Sbjct: 674 QLVLAGDPRQLGPVLRSPLTQKHGLGYSLLERLLTYNALYKKGSNGYNPQFITKLLRNYR 733
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTD 1202
I+++ N L Y L +D + + C W E L P + P+IF
Sbjct: 734 SHPTILDIPNQLYYEGELQACADVVDRERF-------CH-W--EGL-PRQGFPIIFHGVM 782
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELV-------KNEIEGKDIGIITPYNSQANLIR 1255
E + NP EA + + L+ K + + +G+I+PY Q IR
Sbjct: 783 GKDEREGNS-PSFFNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIR 841
Query: 1256 HSLS-----------VSSVEIHTIDKYQGRDKDCILVSFVRSSEN----PRNCTSSLLGD 1300
H ++ + +++ +++++QG+++ IL+S VRSS++ + L +
Sbjct: 842 HCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKN 901
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R NVA+TRAK LI+VG+ L P K+ + E G
Sbjct: 902 PKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFCKENGG 943
Score = 111 (44.1 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 52/165 (31%), Positives = 80/165 (48%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A II T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 494 DRSLESNPEQLQAMKYIIMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 553
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A + V KK+L
Sbjct: 554 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGDYVFPAKKKL 613
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
+ +V+ +T L IT L +F + +DEAG + P SL
Sbjct: 614 QEYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHSMEPESL 656
Score = 40 (19.1 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
E+ L+ + R ++ + D+ + G P G S+M++ +K
Sbjct: 23 ERGLDMETDRERLRTVYNWDFKISFGTPAPG-FSSMLYGMK 62
>MGI|MGI:2443480 [details] [associations]
symbol:Setx "senataxin" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR026121 MGI:MGI:2443480 GO:GO:0005524 GO:GO:0005737
GO:GO:0005654 GO:GO:0005730 GO:GO:0007623 GO:GO:0006302
GO:GO:0004386 eggNOG:COG1112 GO:GO:0006369 KO:K10706 EMBL:AL772379
GeneTree:ENSGT00580000081652 CTD:23064 HOVERGEN:HBG108476
OrthoDB:EOG4XWFWX PANTHER:PTHR10887:SF15 EMBL:AL845267
EMBL:AK044730 EMBL:AK048354 EMBL:AK077911 EMBL:BC046382
EMBL:BC058109 EMBL:BC079604 EMBL:AK129177 EMBL:BK001523
IPI:IPI00421108 IPI:IPI00626271 RefSeq:NP_932150.2 UniGene:Mm.41867
ProteinModelPortal:A2AKX3 SMR:A2AKX3 DIP:DIP-56995N IntAct:A2AKX3
STRING:A2AKX3 PhosphoSite:A2AKX3 PaxDb:A2AKX3 PRIDE:A2AKX3
Ensembl:ENSMUST00000061578 Ensembl:ENSMUST00000129544 GeneID:269254
KEGG:mmu:269254 UCSC:uc008izm.1 InParanoid:A2AKX3 NextBio:392760
Bgee:A2AKX3 CleanEx:MM_SETX Genevestigator:A2AKX3 Uniprot:A2AKX3
Length = 2646
Score = 258 (95.9 bits), Expect = 1.0e-15, Sum P(5) = 1.0e-15
Identities = 90/273 (32%), Positives = 138/273 (50%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K +LVGD QLPP V S +A+E G + S+ F
Sbjct: 2151 FSCVIVDEAGQSCEVETLSPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFC 2210
Query: 1127 RLSEEHPQA-----ISALQS--QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L EE+ + + LQ QYRM I + +Y L ++ + + I+ S
Sbjct: 2211 KLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLK--TNRLTES-IRCS-- 2265
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---EI 1236
S W P +P + D+ E +D+ + N E L+ +I + L+K +I
Sbjct: 2266 ---SEW------PFQPYLVF--DVGDGSERRDNDSYINVQEIKLVMEIIK-LIKEKRKDI 2313
Query: 1237 EGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
++IGIIT Y +Q +I+ L E+ T+D +QGR KDCI+V+ VR+S
Sbjct: 2314 SFRNIGIITHYKAQKTMIQKDLEKEFDKKGPAEVDTVDAFQGRQKDCIIVTCVRASAVQG 2373
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ L R+NV +TRAK L ++G RTL
Sbjct: 2374 SI--GFLASLQRLNVTITRAKYSLFILGHLRTL 2404
Score = 61 (26.5 bits), Expect = 1.0e-15, Sum P(5) = 1.0e-15
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALL 985
K N+DQ++AI ++ LI G PGTGK+ T+V + LL
Sbjct: 1908 KDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLL 1957
Score = 52 (23.4 bits), Expect = 7.7e-15, Sum P(5) = 7.7e-15
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 964 LILGMPGTGKTSTMVHAVKALLM----RGAS------------ILLTSYTNSAVDNLLIK 1007
LI G PGTGK+ T+V + LL +G S +L+ + +N+AVD L+ K
Sbjct: 1936 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKK 1995
Query: 1008 L 1008
+
Sbjct: 1996 I 1996
Score = 49 (22.3 bits), Expect = 1.0e-15, Sum P(5) = 1.0e-15
Identities = 23/80 (28%), Positives = 33/80 (41%)
Query: 736 DRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL-----SSIVLDASNEHQKSYRDNRFVY 790
D +IDLE E + + CS GG + S VLD +E QKS + F
Sbjct: 803 DNIIDLE--ENTAISDLENCSGTDGGALKEDSIGHNVPSDPVLDDKHEEQKSQNSSLFKK 860
Query: 791 HFVRQHMPSPNLNASDGDSL 810
+ + N ++ D D L
Sbjct: 861 EIKSEELD--NSSSDDEDKL 878
Score = 43 (20.2 bits), Expect = 1.0e-15, Sum P(5) = 1.0e-15
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 216 YSV-SSQQSPFRTPPSLSYYHDKL 238
YS S F+TPPS DK+
Sbjct: 602 YSTFGDSTSTFKTPPSFKEESDKI 625
Score = 42 (19.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 240 GICMLLTILEEQAMDSLLLGSDKQN-DFMQ 268
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(4) = 2.4e-14
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTL 1084
+ PL+ ++ D+C + QTT+
Sbjct: 939 SKPLVAGRQIDLCNITLISQTTV 961
Score = 39 (18.8 bits), Expect = 1.0e-15, Sum P(5) = 1.0e-15
Identities = 9/40 (22%), Positives = 22/40 (55%)
Query: 1013 IDFVRIGRHEVVHKEIQKHCL-SAMNINSVEEIKKRLDQV 1051
I+ VR+G + ++ E+ K L S +N +++ + ++
Sbjct: 2017 INLVRLGPEKSINTEVLKFSLDSQVNHRMKKDLPSHIQEM 2056
Score = 38 (18.4 bits), Expect = 1.2e-14, Sum P(5) = 1.2e-14
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 332 LSKSQDKNGA-GMLLEANSVVNGVPTDP 358
+S ++ +G G L+ +S+ + VP+DP
Sbjct: 814 ISDLENCSGTDGGALKEDSIGHNVPSDP 841
>FB|FBgn0035842 [details] [associations]
symbol:CG7504 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR008984 Pfam:PF00498 PROSITE:PS50006
SMART:SM00240 GO:GO:0005875 EMBL:AE014296 GO:GO:0006200
GO:GO:0016887 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG1112
KO:K10706 GeneTree:ENSGT00580000081652 RefSeq:NP_001137907.1
UniGene:Dm.31993 ProteinModelPortal:B7Z0D7 SMR:B7Z0D7 STRING:B7Z0D7
PaxDb:B7Z0D7 EnsemblMetazoa:FBtr0273367 GeneID:38904
KEGG:dme:Dmel_CG7504 FlyBase:FBgn0035842 OMA:NRSKSCY
OrthoDB:EOG4DV42G GenomeRNAi:38904 NextBio:810939 Bgee:B7Z0D7
Uniprot:B7Z0D7
Length = 1676
Score = 251 (93.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 78/278 (28%), Positives = 134/278 (48%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD+CI+DEA Q T P +L P+ F + VLVGD QLP +V S +A + G+ S+F R+
Sbjct: 1385 FDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQ 1444
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ S + M + +LS + C N L + + A
Sbjct: 1445 RSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEI-C---RWPNQYFYEDQLINAECTARFA 1500
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK-DIGIITPYN 1248
+P P +N +++++N EA +AK+ E+ K+ + G+I+PY
Sbjct: 1501 -SPLIPYCVINLKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQ 1559
Query: 1249 SQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
+Q + + S ++ T+D YQG +KD I++S R+ R C L ++ R+NVA
Sbjct: 1560 NQCYALSQVIPSHMNITPQTVDSYQGLEKDVIIISNART----RGC--GFLTNYQRLNVA 1613
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LTR ++ L++ G+ L V + + L++ ++ N
Sbjct: 1614 LTRPRRCLVICGNFEDLKSVEMWRNLLDDARKRKVYFN 1651
Score = 48 (22.0 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 16/56 (28%), Positives = 21/56 (37%)
Query: 50 NSDLIHSVSSPNCPPFSVYRNPSDSAP-SKKNSPQSALENTPPDNILPIDDETNST 104
NS L + SP N +++ S + Q P NI P ETN T
Sbjct: 451 NSKLKSCLKSPTKTSVDNMENMTETKSCSNRQREQIVASRNEPTNICPQKIETNKT 506
Score = 45 (20.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 45/202 (22%), Positives = 79/202 (39%)
Query: 3 QRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKN--VD--VSSFPQNPNSDLIHSVS 58
+ KK + +++ P PTK ++ + N SK+ +D V S ++P +I +S
Sbjct: 633 ENKKISPAKQTNEEIPIPTKSPLKR--NARLLNRSKSCYMDRLVISETEDPAKKVIKDIS 690
Query: 59 SPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSP 118
N D ++ P S +E P LP + S E+ + K
Sbjct: 691 PTKSDTTDNVLNFVDVRQTR--GP-SVIE--APS--LP-KNRGKLRGVSAEVKVKDKVLD 742
Query: 119 EMLIKLSQYDGGDEVTWNISPVNERLLAVS-KQMPPENIRVLANSSRLNSLTIHQCSHNK 177
+ Y W P +++ K+ E ++ L+ + NS H+ + NK
Sbjct: 743 RQ--RFIDYQAEMNAKWKQKPKDKKKEDEKLKECRREALKKLSEKPKENS---HRSTTNK 797
Query: 178 SKQPS--PSPKAINRS--LTTG 195
K P+ P+ + NR LT G
Sbjct: 798 RKNPTSVPTVQNTNRGGFLTKG 819
Score = 43 (20.2 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 170 IHQCSHNKSKQPSPSPKAINRSLTTGRKRVNP 201
+ +C K+ S PK N +T KR NP
Sbjct: 771 LKECRREALKKLSEKPKE-NSHRSTTNKRKNP 801
Score = 40 (19.1 bits), Expect = 7.8e-15, Sum P(3) = 7.8e-15
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 354 VPTDPP--EN---VNGTSSCHFLVLEVSEKNRPADPV 385
+PT P N +N + SC+ L +SE PA V
Sbjct: 649 IPTKSPLKRNARLLNRSKSCYMDRLVISETEDPAKKV 685
Score = 38 (18.4 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 824 LRSGDYVILSTESDRLAVA 842
+ GD + L T++DR +++
Sbjct: 234 IHDGDCIELDTDTDRRSIS 252
>UNIPROTKB|F1SBP9 [details] [associations]
symbol:MOV10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035279 "mRNA cleavage involved in gene silencing by
miRNA" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] GO:GO:0000932 GO:GO:0035279 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
OMA:VRFFKLD EMBL:CU861480 RefSeq:XP_003481536.1 UniGene:Ssc.19573
Ensembl:ENSSSCT00000007422 GeneID:100521086 KEGG:ssc:100521086
Uniprot:F1SBP9
Length = 1001
Score = 180 (68.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 74/282 (26%), Positives = 125/282 (44%)
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL-----------SEEHPQAISALQSQYR 1144
+ VL GD QL P+++ +++G+ SL RL +PQ I+ L YR
Sbjct: 674 QLVLAGDPRQLGPVLRCPLTQKHGLGYSLLERLLTYNALYKKGPDGYNPQFITKLLRNYR 733
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTD 1202
I+++ N L Y L +D + + C W E L P + P+IF
Sbjct: 734 SHPTILDIPNQLYYEGELQACADVVDRERF-------CR-W--EGL-PRQGFPIIFHGVM 782
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELV-------KNEIEGKDIGIITPYNSQANLIR 1255
E + NP EA + ++L+ K + + +G+I+PY Q IR
Sbjct: 783 GKDEREGNS-PSFFNPEEAATVTSYLKQLLTSSSKKGKARLSPRSVGVISPYRKQVEKIR 841
Query: 1256 HSLS-----------VSSVEIHTIDKYQGRDKDCILVSFVRSSEN----PRNCTSSLLGD 1300
H ++ + +++ +++++QG+++ IL+S VRSS++ + L +
Sbjct: 842 HCITKLDKELRGLDDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKN 901
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R NVA+TRAK LI+VG+ L P K + E G
Sbjct: 902 PKRFNVAVTRAKALLIVVGNPLLLGHDPDWKAFLEFCKENGG 943
Score = 111 (44.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 51/165 (30%), Positives = 80/165 (48%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A I+ T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 494 DRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 553
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A + V KK+L
Sbjct: 554 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRLVPEDIKPCCNWDAQKGDYVFPAKKKL 613
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
+ +V+ +T L IT L +F + +DEAG + P SL
Sbjct: 614 QEYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHSMEPESL 656
>TAIR|locus:2200996 [details] [associations]
symbol:SDE3 "SILENCING DEFECTIVE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0009616
"virus induced gene silencing" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035194 "posttranscriptional gene
silencing by RNA" evidence=IMP] InterPro:IPR026127 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005737
eggNOG:COG1112 EMBL:AC005106 GO:GO:0003724 GO:GO:0035194
GO:GO:0009616 HOGENOM:HOG000239755 EMBL:AF339908 EMBL:AK117698
IPI:IPI00521883 PIR:C86189 RefSeq:NP_172037.1 UniGene:At.15329
UniGene:At.42398 ProteinModelPortal:Q8GYD9 SMR:Q8GYD9 STRING:Q8GYD9
PaxDb:Q8GYD9 PRIDE:Q8GYD9 EnsemblPlants:AT1G05460.1 GeneID:837047
KEGG:ath:AT1G05460 GeneFarm:2423 TAIR:At1g05460 InParanoid:Q8GYD9
OMA:DEREGNN PhylomeDB:Q8GYD9 ProtClustDB:CLSN2682016
Genevestigator:Q8GYD9 GermOnline:AT1G05460 PANTHER:PTHR10887:SF165
Uniprot:Q8GYD9
Length = 1002
Score = 235 (87.8 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 95/371 (25%), Positives = 171/371 (46%)
Query: 987 RGASILLTSYTNSAVDNLLIKL------KSQSIDFVRIGR----HEVVHKEIQKHCLSAM 1036
R A +L+ + +NSA D++L KL + + + R+ +E + EI + C
Sbjct: 443 RNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDE 502
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLG--ITNPLLTDK-KFDVCIMDEAGQTTLP---VSLGP 1090
I +K L + K+V T + + N ++ F ++DEAGQ + P +++
Sbjct: 503 LIFKCPPLKA-LTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSN 561
Query: 1091 LMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSE-----EHPQA-ISALQSQY 1143
L V L GD QL P++ S +A G+ S RL E E + ++ L Y
Sbjct: 562 LCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNY 621
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
R I++L + L Y L ++ + ++ L + KE P++F
Sbjct: 622 RCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPN-----KEF-----PMVFYGIQG 671
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRH---SLS 1259
E + N +E + + + L N+ ++ +DIG+ITPY Q I+ L
Sbjct: 672 CDEREGNNPSWFNR-IEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLD 730
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSS----ENPRNCTSSLLGDWHRINVALTRAKKKL 1315
++ V++ +++++QG++K I++S VRS+ E R L + R NVA+TRA L
Sbjct: 731 MTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLL 790
Query: 1316 IMVGSCRTLSK 1326
+++G+ + K
Sbjct: 791 VIIGNPHIICK 801
Score = 139 (54.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 86/343 (25%), Positives = 147/343 (42%)
Query: 944 SLNDDQRRAIIKVLTAKDYA--LILGMPGTGKTSTMVHAVKALL--MRGASILLTSYTNS 999
+LN +Q +I VL K +I G PGTGKT T+V A+ L R A +L+ + +NS
Sbjct: 396 ALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNS 455
Query: 1000 AVDNLLIKL------KSQSIDFVRIGR----HEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
A D++L KL + + + R+ +E + EI + C I +K L
Sbjct: 456 AADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKA-LT 514
Query: 1050 QVKVVAVTCLG--ITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
+ K+V T + + N ++ F ++DEAGQ + P ++ + S L
Sbjct: 515 RYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENM---IAVSNLCLTET---- 567
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM---CQG----IMEL-SNALIY 1158
+V + + R+ G I + R +E S L+ + C+G + +L N +
Sbjct: 568 -VVVLAGDPRQLGPVI--YSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCH 624
Query: 1159 GDRLSCGSDEIANAKIKVS--DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
+ L S + ++ S D S L N P++F E + N
Sbjct: 625 PEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFN 684
Query: 1217 NPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRHSL 1258
+E + + + L N+ ++ +DIG+ITPY Q I+ L
Sbjct: 685 R-IEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVL 726
>RGD|1565575 [details] [associations]
symbol:Setx "senataxin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=IEA;ISO] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=ISO] [GO:0007623 "circadian rhythm"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR026121 RGD:1565575 GO:GO:0006302 PANTHER:PTHR10887:SF15
IPI:IPI00560336 Ensembl:ENSRNOT00000018281 UCSC:RGD:1565575
ArrayExpress:F1M0E2 Uniprot:F1M0E2
Length = 380
Score = 152 (58.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 62/203 (30%), Positives = 97/203 (47%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K VLVGD QLPP V S +A+E G + S+ F
Sbjct: 24 FSCVIVDEAGQSCEVETLSPLIHRCNKLVLVGDPKQLPPTVISMKAQEYGYDQSMMARFC 83
Query: 1127 RLSEEHPQA-------ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L EE+ + + L QYRM I + +Y L ++++
Sbjct: 84 KLLEENVEQNMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKNLKTN---------RLTET 134
Query: 1180 SSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---E 1235
CS W P +P + D+ E +D+ + N E L+ +I + L+K +
Sbjct: 135 IRCSSEW------PFQPYLVF--DVGDGSEQRDNDSYINVQEIKLVMEIIK-LIKEKRKD 185
Query: 1236 IEGKDIGIITPYNSQANLIRHSL 1258
I ++IGIIT Y +Q +I+ L
Sbjct: 186 ISFRNIGIITHYKAQKTMIQKDL 208
Score = 126 (49.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
E+ T+D +QGR KDCI+V+ VR+S + L R+NV +TRAK L ++G RT
Sbjct: 274 EVDTVDAFQGRQKDCIIVTCVRASAVQGSI--GFLASLQRLNVTITRAKYSLFILGHLRT 331
Query: 1324 L 1324
L
Sbjct: 332 L 332
Score = 41 (19.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
L P++ E+R+ E S ++ S E A L S GI L N
Sbjct: 218 LQPIMMG-ESRQQDSEASKQQQKSSECMHASDELDSSTVTQSGISSLEN 265
>ZFIN|ZDB-GENE-061013-333 [details] [associations]
symbol:zgc:154086 "zgc:154086" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-061013-333 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR025223 Pfam:PF14444
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 HOGENOM:HOG000015363 EMBL:BC124807
IPI:IPI00611882 RefSeq:NP_001070795.1 UniGene:Dr.40096
ProteinModelPortal:Q08BA5 GeneID:768184 KEGG:dre:768184
NextBio:20918499 Uniprot:Q08BA5
Length = 1106
Score = 245 (91.3 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 92/290 (31%), Positives = 135/290 (46%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASK----FVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
F +DEAGQ T P +L PL S+ VL GD QL P+V+S A G+ +SL
Sbjct: 808 FTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPKQLGPVVKSRLASVFGLGVSLLE 867
Query: 1127 RL--------SEE--HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
RL E +P ++ L YR + +++L + L Y L C A+
Sbjct: 868 RLMGNSLYACGERGFNPLLVTKLLYNYRSHEALLDLPSRLFYAGEL-C-----VRAQRAA 921
Query: 1177 SDLSSCSPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK- 1233
D S C W K P R P+IF E + N P EA + +L K
Sbjct: 922 VD-SLCH-WNKL---PTRGFPLIFHGVRGSEMREGCNPSWFN-PAEAVQVMMYCCQLAKR 975
Query: 1234 --NEIEGKDIGIITPYNSQANLIR---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
N I DIG+I PY Q IR + + V++ +++++QG++ +++S VRS+E
Sbjct: 976 LYNPISAADIGVIAPYRKQVEKIRVLLQRVGLGEVKVGSVEEFQGQEFLIMILSTVRSNE 1035
Query: 1289 NPRN----CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+ N C L + R NVA+TRAK LI++G+ L K P L+
Sbjct: 1036 SLLNEELQCMLGFLSNPKRFNVAITRAKALLIVIGNPHVLIKEPCFSALL 1085
Score = 215 (80.7 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 103/380 (27%), Positives = 171/380 (45%)
Query: 945 LNDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAVKALLMR-GAS-ILLTSYTNS 999
LN Q++A+ ++L+ + ++ G PGTGKT T++ A+ + R S +L+ + +NS
Sbjct: 673 LNAAQKQAVRRILSGESRPTPYVLFGPPGTGKTITLIEAILQVHHRISCSRVLVCTPSNS 732
Query: 1000 AVDNLLIKLKSQ----SIDFVRIGR----HEVVHKEIQKHCLSAMNINSVEEIKKRLDQV 1051
A D + ++L S R+ E + +E++++ + E+I+
Sbjct: 733 AADLICMRLHHSGFLHSASLARVNATCRPEESMSEELRQYARAG------EDIRHASFH- 785
Query: 1052 KVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFASK----FVLVGDHY 1104
++V TC G+ + L F +DEAGQ T P +L PL S+ VL GD
Sbjct: 786 RIVVSTCSSAGMFYQIGLRVGHFTHVFVDEAGQATEPETLIPLSLLSETSGQIVLAGDPK 845
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM---ELSNALI-YGD 1160
QL P+V+S A G+ +SL RL A + ++ AL+
Sbjct: 846 QLGPVVKSRLASVFGLGVSLLERLMGNSLYACGERGFNPLLVTKLLYNYRSHEALLDLPS 905
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNP 1218
RL + A+ D S C W K P R P+IF E + N P
Sbjct: 906 RLFYAGELCVRAQRAAVD-SLCH-WNKL---PTRGFPLIFHGVRGSEMREGCNPSWFN-P 959
Query: 1219 VEACLIAKITQELVK---NEIEGKDIGIITPYNSQANLIR---HSLSVSSVEIHTIDKYQ 1272
EA + +L K N I DIG+I PY Q IR + + V++ +++++Q
Sbjct: 960 AEAVQVMMYCCQLAKRLYNPISAADIGVIAPYRKQVEKIRVLLQRVGLGEVKVGSVEEFQ 1019
Query: 1273 GRDKDCILVSFVRSSENPRN 1292
G++ +++S VRS+E+ N
Sbjct: 1020 GQEFLIMILSTVRSNESLLN 1039
Score = 42 (19.8 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CS 477
+GR + L++H G R+ S S +L+ + CS
Sbjct: 363 LGRSSELLLLHFSSFTIGRRLELSVSSVEEQLLNPSMPYCS 403
>POMBASE|SPCC1739.03 [details] [associations]
symbol:hrr1 "Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1" species:4896 "Schizosaccharomyces
pombe" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0030702
"chromatin silencing at centromere" evidence=IMP] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0031379
"RNA-directed RNA polymerase complex" evidence=IDA] [GO:0031380
"nuclear RNA-directed RNA polymerase complex" evidence=IDA]
PomBase:SPCC1739.03 GO:GO:0005829 GO:GO:0005524 GO:GO:0007059
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003723 GO:GO:0006338
GO:GO:0007049 GO:GO:0030702 GO:GO:0004386 GO:GO:0031048
eggNOG:COG1112 GO:GO:0016585 GO:GO:0031380 PIR:T41111
RefSeq:NP_588411.2 DIP:DIP-29303N STRING:O74465
EnsemblFungi:SPCC1739.03.1 GeneID:2539248 OrthoDB:EOG4DRDMD
NextBio:20800418 Uniprot:O74465
Length = 999
Score = 174 (66.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 74/288 (25%), Positives = 131/288 (45%)
Query: 1053 VVAVTCLGITN--PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGDHYQLPP 1108
V+ +T G+ +L +C ++EA L + P +F S + VL+GDH QL P
Sbjct: 685 VIGMTTTGLNKYRDILERINPKICFIEEAADV-LEGPIIPAVFPSLEQLVLIGDHKQLRP 743
Query: 1109 LVQSTEAREN--GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
+ R++ + IS+F RL E + + L Q RM I L ++ +Y D
Sbjct: 744 GCSTYALRQDPFNLSISMFERLVENDME-YTRLTMQRRMHPQIRRLVSS-VYED------ 795
Query: 1167 DEIANAKIKVSDLSSCSPWLK-EALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLI 1224
+SD W + R ++ + E D + N EA ++
Sbjct: 796 ---------LSDYEITKYWPSIPGMGEIRRFFLTHSRI----EDNDGFASKINLFEAQML 842
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------VEIHTIDKYQGRDKDC 1278
+ L+ N +E + I +T Y +Q +LI LS S +++ T+D YQG + D
Sbjct: 843 VQFAVYLINNGVEPQKITCLTFYAAQKDLIERLLSESLNREKHFIKVATVDGYQGEENDV 902
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+L+S VR+++ L HR+ V+L+RA++ L + G+ + +++
Sbjct: 903 VLLSLVRNNDRTE---VGFLSSPHRVCVSLSRARRGLFIFGNAQLVAE 947
Score = 110 (43.8 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS----ILLTSYT 997
E L+ Q +A +LT K ++I G PGTGK+ + A++ LL S IL+ T
Sbjct: 369 EYILDSSQLKAYQSMLT-KRLSIIQGPPGTGKSFVTLKAIETLLENTHSHVLPILVACQT 427
Query: 998 NSAVDNLLIKLKSQSIDFVRIG 1019
N AVD +LI+L Q +R+G
Sbjct: 428 NHAVDQILIRLLHQGASVMRLG 449
>TAIR|locus:2018561 [details] [associations]
symbol:AT1G65810 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0048451 "petal formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
EMBL:CP002684 GO:GO:0004386 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI01019905 RefSeq:NP_176757.1
UniGene:At.52388 ProteinModelPortal:F4IBK8 SMR:F4IBK8 PRIDE:F4IBK8
EnsemblPlants:AT1G65810.1 GeneID:842892 KEGG:ath:AT1G65810
OMA:DSEINKR ArrayExpress:F4IBK8 Uniprot:F4IBK8
Length = 1050
Score = 183 (69.5 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 81/304 (26%), Positives = 139/304 (45%)
Query: 1038 INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ-----TTLPVSLGPLM 1092
I+ E K LD ++ T L + ++DEA Q + +P+ L L
Sbjct: 521 ISKFELQKLCLDNAYLLFCTASSSAR-LHMSSPIQLLVIDEAAQLKECESAIPLQLRGLQ 579
Query: 1093 FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIME 1151
A +L+GD QLP +++S A E + SLF RL H + + L QYRM I
Sbjct: 580 HA---ILIGDEKQLPAMIKSNIASEADLGRSLFERLVLLGHNKQL--LNMQYRMHPSISI 634
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
N Y ++ + + +++ + +L E + P F+N +
Sbjct: 635 FPNREFYDMKIL----DAPSVRLRSYE----KKFLPEKMYG--PYSFINIAYGREQFGEG 684
Query: 1212 HQTLNNPVEACLIAKITQELVK-NEIEGKDI--GIITPYNSQANLIRHSLSVS------- 1261
+ + N VE ++A+I +L + G+ I G+I+PY +Q I+ +
Sbjct: 685 YSS-KNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYKAQVFAIQERIGEKYNTEGTF 743
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
+V + ++D +QG ++D I++S VRS+ N L + R NVALTRA+ L ++G+
Sbjct: 744 TVSVRSVDGFQGGEEDIIIISTVRSNGNG---AIGFLSNQQRTNVALTRARYCLWILGNE 800
Query: 1322 RTLS 1325
TL+
Sbjct: 801 ATLT 804
Score = 94 (38.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 42/110 (38%), Positives = 57/110 (51%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK------DYALILGMPGTGKT-STM 977
+S SV S D + + S K LN Q AI++ L AK + LI G PGTGKT +T
Sbjct: 249 NSESVVS-DYSARMLRSFK-LNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTS 306
Query: 978 VHAVKALLMRGASILLTSYTNSAVDNL---LIKLKSQSIDFVRIGRHEVV 1024
V + L MR L + TN AV + L+KL S+S+ F G ++V
Sbjct: 307 VLLLNFLKMR-CRTLTCAPTNIAVLEVCSRLVKLVSESLRFDGYGLGDIV 355
Score = 54 (24.1 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 525 CGVNENDIHK-TLVEAIPKMLNWIILFKDSQDLNT 558
CGVNEN+ H T++ + P I+F D D+ T
Sbjct: 156 CGVNENNPHLITILASKP------IIFDDDDDIKT 184
>TAIR|locus:2166173 [details] [associations]
symbol:AT5G37150 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0016787
"hydrolase activity" evidence=IEA] EMBL:CP002688 GO:GO:0004386
KO:K10706 IPI:IPI01020555 RefSeq:NP_198531.2 UniGene:At.55176
ProteinModelPortal:F4K5W5 SMR:F4K5W5 PRIDE:F4K5W5
EnsemblPlants:AT5G37150.1 GeneID:833688 KEGG:ath:AT5G37150
OMA:RSVDEYY Uniprot:F4K5W5
Length = 839
Score = 199 (75.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 80/301 (26%), Positives = 135/301 (44%)
Query: 1042 EEIKKR-LDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFAS--KF 1097
E+I+K L ++ T G + ++ ++DEA Q S+ L
Sbjct: 496 EDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHA 555
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIMELSNAL 1156
+L+GD +QLP +V + + SLF RL H + + L QYRM I N
Sbjct: 556 ILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHL--LDVQYRMHPSISRFPNKE 613
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
YG R+ + N K + +L+ N F+N E D +
Sbjct: 614 FYGGRIK----DAENVKESIYQ----KRFLQG--NMFGSFSFINVGR-GKEEFGDGHSPK 662
Query: 1217 NPVEACLIAKITQELVKNEIEGK---DIGIITPYNSQANLIRHSL-----SVS----SVE 1264
N VE ++++I L K E + +G+++PY Q I+ + S+S ++
Sbjct: 663 NMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFALN 722
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ ++D +QG ++D I++S VRS+ N + L + R NVALTRA+ L ++G+ TL
Sbjct: 723 VRSVDGFQGGEEDIIIISTVRSNSNGK---VGFLNNRQRANVALTRARHCLWVIGNETTL 779
Query: 1325 S 1325
+
Sbjct: 780 A 780
Score = 80 (33.2 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYA------LILGMPGTGKTSTMVHAVKALLMRGA 989
L I S K LN Q AI+ L ++ LI G PGTGKT T+ + ALL
Sbjct: 213 LDIIRSTK-LNSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRC 271
Query: 990 SILLTSYTNSAVDNLLIKLKS 1010
++ + TN+A+ + +L S
Sbjct: 272 KTVVCAPTNTAIVQVASRLLS 292
>UNIPROTKB|F1PHA4 [details] [associations]
symbol:SETX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006302 "double-strand break repair"
evidence=IEA] InterPro:IPR026121 GO:GO:0006302
GeneTree:ENSGT00580000081652 OMA:RLINHFE PANTHER:PTHR10887:SF15
EMBL:AAEX03006816 EMBL:AAEX03006817 Ensembl:ENSCAFT00000031656
Uniprot:F1PHA4
Length = 2531
Score = 255 (94.8 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 92/293 (31%), Positives = 143/293 (48%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISL---FR 1126
F I+DEAGQ+ +L PL+ +K +LVGD QLPP V S +A+E G + S+ F
Sbjct: 2198 FSCVIVDEAGQSCEVETLTPLIHRCNKLILVGDPKQLPPTVISMKAQEYGYDQSMMARFY 2257
Query: 1127 RLSE---EHPQA--ISALQS--QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+L E EH + LQ QYRM I + +Y L N + + +
Sbjct: 2258 KLLEDNVEHNMIGRLPVLQLTVQYRMHPDICLFPSNYVYNRSLK------TNRQTETNRC 2311
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---EI 1236
SS W P +P + D+ E +D+ + N E L+ +I + L+K+ ++
Sbjct: 2312 SS--DW------PFQPYLVF--DVGDGSERRDNDSYVNVQEIKLVMEIIK-LIKDKRRDV 2360
Query: 1237 EGKDIGIITPYNSQANLIRHSLSVS-----SVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
++IGIIT Y +Q +I+ L E+ T+D +QGR KDC++V+ VR+ N
Sbjct: 2361 TFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVIVTCVRA--NAM 2418
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
+ L R+NV +TRAK L ++G RTL + LI ++ I+
Sbjct: 2419 QGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGAII 2471
Score = 58 (25.5 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 943 KSLNDDQRRAIIKVLTAKDYA-------LILGMPGTGKTSTMVHAVKALL 985
+ N+DQ++AI ++ LI G PGTGK+ T+V + LL
Sbjct: 1955 RDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLL 2004
Score = 52 (23.4 bits), Expect = 6.0e-14, Sum P(5) = 6.0e-14
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 964 LILGMPGTGKTSTMVHAVKALLM----RGAS------------ILLTSYTNSAVDNLLIK 1007
LI G PGTGK+ T+V + LL +G S +L+ + +N+AVD L+ K
Sbjct: 1983 LIHGPPGTGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKK 2042
Query: 1008 L 1008
+
Sbjct: 2043 I 2043
Score = 47 (21.6 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 9/35 (25%), Positives = 19/35 (54%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+ H V+ +T+ +I F+ K ++G ++ IV
Sbjct: 63 FLHEVLWELETLRLINHFEKSMKAEIGDDDELYIV 97
Score = 42 (19.8 bits), Expect = 9.9e-14, Sum P(4) = 9.9e-14
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
G +LLT A+D+LL+ Q+ DF++
Sbjct: 247 GICMLLTILEEQAMDSLLLGSDKQN-DFMQ 275
Score = 39 (18.8 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1013 IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRL 1048
I+ VR+G + ++ E+ K L + +N +KK L
Sbjct: 2064 INLVRLGPEKSINNEVLKFSLDSQ-VN--HRMKKDL 2096
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 832 LSTESDRLAVASGLITEISRFHVSVSFSKP 861
LS ES + L TE ++ V +S KP
Sbjct: 693 LSAESCIKQSSKSLFTERAQDQVKISTEKP 722
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(5) = 1.5e-14
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 723 HLTTAHCSFLRHWDRLIDLE----AKEMQVVKNEI 753
HL + ++W+ ++ LE AK++ +N++
Sbjct: 1799 HLRKFPADYKKYWEFVVHLEECELAKQLHPKENDL 1833
Score = 38 (18.4 bits), Expect = 1.2e-13, Sum P(5) = 1.2e-13
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 33 TQNSSKNVDVSSFPQNPNSDLIHSV 57
TQ+ +++D+ S +N N LI V
Sbjct: 1521 TQHHPEDMDLCSQMENGNEKLIEIV 1545
>TAIR|locus:2018536 [details] [associations]
symbol:AT1G65780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684 GO:GO:0004386
KO:K10706 InterPro:IPR026852 PANTHER:PTHR10887:SF27 IPI:IPI00534309
RefSeq:NP_176754.1 UniGene:At.52386 ProteinModelPortal:F4IBK4
SMR:F4IBK4 PRIDE:F4IBK4 EnsemblPlants:AT1G65780.1 GeneID:842889
KEGG:ath:AT1G65780 Uniprot:F4IBK4
Length = 1065
Score = 212 (79.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 104/364 (28%), Positives = 160/364 (43%)
Query: 985 LMRGASIL--LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE 1042
L+R +IL L T V ++LI S F +H V + K S I +
Sbjct: 472 LVRDVTILAILDGVTGEGVKSVLIPNGEGSDRFS--SQHVTVEDDYLKLLRSIPEIFPLP 529
Query: 1043 EIKKR-LDQVKVVAVTCLGITNP-----LLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS- 1095
+ R L + + CL + L T + ++DEA Q S P+
Sbjct: 530 AVSDRHLIKELCLGHACLLFSTASCSARLYTGTPIQLLVIDEAAQLKECESSIPMQLPGL 589
Query: 1096 -KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIMELS 1153
+LVGD QLP +V+S A E G SLF RL+ H + + L QYRM I
Sbjct: 590 RHLILVGDERQLPAMVESQIALEAGFGRSLFERLALLGHKKYM--LNIQYRMHCSISSFP 647
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM-LPAYEAKDH 1212
N +YG + I +A V + +L + P F+N Y +
Sbjct: 648 NKELYGKK-------ILDAPT-VRQRNYTKQYLPGEMYG--PYSFINIAYGREEYGEGEG 697
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGK---DIGIITPYNSQANLIRHSLSVSSV------ 1263
++L N VE ++A I L++ + K ++G+I+PY +Q I+ + +S+
Sbjct: 698 RSLKNNVEVVVVAAIIANLLQVSEKTKTRINVGVISPYKAQVIAIQEKIQETSIGDAGGL 757
Query: 1264 ---EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
I T+D +QG ++D I+VS VRS+ R LG+ R NV LTRA+ L ++G+
Sbjct: 758 FSLRIRTVDGFQGGEEDIIIVSTVRSNGVGR---VGFLGNRRRTNVLLTRARFCLWILGN 814
Query: 1321 CRTL 1324
TL
Sbjct: 815 EATL 818
Score = 69 (29.3 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 30/89 (33%), Positives = 38/89 (42%)
Query: 945 LNDDQRRAIIKVLT------AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
LN Q AI+ L A LI G PGTGKT T + LL L TN
Sbjct: 238 LNPSQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPTN 297
Query: 999 SAVDNL---LIKLKSQSIDFVRIGRHEVV 1024
+V + ++KL S S+ G +VV
Sbjct: 298 VSVLEVASRVLKLVSGSLKIGNYGLGDVV 326
Score = 47 (21.6 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEIN 610
L + I E D + P YG K ID IR+ +E + + N
Sbjct: 342 LVNIFIDERVDKLYPCFMPFYGWKATIDGMIRL-LEDPKGQYN 383
>TAIR|locus:2173033 [details] [associations]
symbol:AT5G52090 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0004519 eggNOG:COG1112
EMBL:AB015478 KO:K10706 IPI:IPI00525648 RefSeq:NP_200022.1
UniGene:At.65668 ProteinModelPortal:Q9FJ83 SMR:Q9FJ83 PRIDE:Q9FJ83
EnsemblPlants:AT5G52090.1 GeneID:835285 KEGG:ath:AT5G52090
TAIR:At5g52090 HOGENOM:HOG000083772 InParanoid:Q9FJ83 OMA:TACEASE
PhylomeDB:Q9FJ83 ProtClustDB:CLSN2686886 Genevestigator:Q9FJ83
Uniprot:Q9FJ83
Length = 676
Score = 202 (76.2 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 82/301 (27%), Positives = 135/301 (44%)
Query: 1042 EEIKKR-LDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFAS--KF 1097
E+I+K L ++ T G + ++ ++DEA Q S+ L
Sbjct: 333 EDIRKFCLQNADIILCTASGAAEMNVERTGNVELLVVDEAAQLKECESVAALQLPGLRHA 392
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIMELSNAL 1156
+L+GD +QLP +V + + SLF RL H + + L QYRM I N
Sbjct: 393 ILIGDEFQLPAMVHNEMCEKAKFGRSLFERLVLLGHNKHL--LDVQYRMHPSISRFPNKE 450
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
YG R+ + N K + +LK N F+N E D +
Sbjct: 451 FYGGRIK----DAENVKESIYQ----KRFLKG--NMFDSFSFINVGR-GKEEFGDGHSPK 499
Query: 1217 NPVEACLIAKITQELVKNEIEGK---DIGIITPYNSQANLIRHSL-----SVS----SVE 1264
N VE +I++I L K E + +G+++PY Q I+ + S+S ++
Sbjct: 500 NMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLN 559
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ ++D +QG ++D I++S VRS+ N + L + R NVALTRA+ L ++G+ TL
Sbjct: 560 VRSVDGFQGGEEDIIIISTVRSNGNGK---VGFLNNRQRANVALTRARHCLWVIGNETTL 616
Query: 1325 S 1325
+
Sbjct: 617 A 617
Score = 75 (31.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 28/84 (33%), Positives = 40/84 (47%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYA------LILGMPGTGKTSTMVHAVKALLM 986
D L I S K LN Q AI+ L ++ LI G P TGKT T+ + ALL
Sbjct: 47 DLVLDIIRSTK-LNSSQEDAILGCLETRNCTHKNSVKLIWGPPRTGKTKTVATLLFALLK 105
Query: 987 RGASILLTSYTNSAVDNLLIKLKS 1010
++ + TN+A+ + +L S
Sbjct: 106 LRCKTVVCAPTNTAIVQVTSRLLS 129
Score = 44 (20.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 514 VLQKNIESLYACGVNENDIHKTLV 537
VLQ N E C +END LV
Sbjct: 26 VLQANTEGTEQCFCSENDGRSDLV 49
>UNIPROTKB|Q9BXT6 [details] [associations]
symbol:MOV10L1 "Putative helicase Mov10l1" species:9606
"Homo sapiens" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=IEP]
[GO:0005524 "ATP binding" evidence=TAS] [GO:0000287 "magnesium ion
binding" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0007281 "germ cell development" evidence=IEP] [GO:0005622
"intracellular" evidence=IC] GO:GO:0007275 GO:GO:0005524
GO:GO:0000287 GO:GO:0007283 GO:GO:0003723 GO:GO:0005622
GO:GO:0007281 eggNOG:COG1112 GO:GO:0004004 EMBL:AL022328
EMBL:AF285604 EMBL:AK000033 EMBL:AK090740 EMBL:CR456466
EMBL:AL034546 EMBL:BC150137 EMBL:BC152539 EMBL:AL133068
IPI:IPI00005638 IPI:IPI00178391 IPI:IPI00215671 IPI:IPI00853536
PIR:T42668 RefSeq:NP_001157576.1 RefSeq:NP_001157577.1
RefSeq:NP_001157578.1 RefSeq:NP_061868.1 UniGene:Hs.62880
ProteinModelPortal:Q9BXT6 SMR:Q9BXT6 STRING:Q9BXT6
PhosphoSite:Q9BXT6 DMDM:22095856 PaxDb:Q9BXT6 PeptideAtlas:Q9BXT6
PRIDE:Q9BXT6 DNASU:54456 Ensembl:ENST00000262794
Ensembl:ENST00000354853 Ensembl:ENST00000395843
Ensembl:ENST00000395852 Ensembl:ENST00000395858
Ensembl:ENST00000545383 GeneID:54456 KEGG:hsa:54456 UCSC:uc003bjj.3
UCSC:uc003bjl.3 UCSC:uc003bjm.1 CTD:54456 GeneCards:GC22P050528
HGNC:HGNC:7201 HPA:HPA019034 MIM:605794 neXtProt:NX_Q9BXT6
PharmGKB:PA30909 HOVERGEN:HBG052382 InParanoid:Q9BXT6 KO:K13983
OMA:NMSGVTL OrthoDB:EOG49GKFV PhylomeDB:Q9BXT6 GenomeRNAi:54456
NextBio:56697 ArrayExpress:Q9BXT6 Bgee:Q9BXT6 CleanEx:HS_MOV10L1
Genevestigator:Q9BXT6 GermOnline:ENSG00000073146 InterPro:IPR026125
PANTHER:PTHR10887:SF6 Uniprot:Q9BXT6
Length = 1211
Score = 215 (80.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 85/325 (26%), Positives = 144/325 (44%)
Query: 1042 EEIKKRLDQVKVVAVTCL--GITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--- 1095
E+I K + +++ TC G+ + + F +DEAGQ + P L PL S
Sbjct: 849 EDIWKA-SRFRIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDIS 907
Query: 1096 -KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE----------------HPQAISA 1138
+ VL GD QL P+++S A G+ +S RL +P ++
Sbjct: 908 GQIVLAGDPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTK 967
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L YR + ++ L + L Y L +D V+ L K+ P+IF
Sbjct: 968 LVKNYRSHEALLMLPSRLFYHRELEVCADPTV-----VTSLLGWEKLPKKGF----PLIF 1018
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAK---ITQELVKNEIEGKDIGIITPYNSQANLIR 1255
A E K N P EA + + + + +++ DIG+ITPY Q IR
Sbjct: 1019 HGVRGSEAREGKSPSWFN-PAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIR 1077
Query: 1256 ---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG---DWHRINVALT 1309
++ + +++ +++++QG++ I++S VRS+E+ LG + R NVA+T
Sbjct: 1078 ILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 1137
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLI 1334
R K LI++G+ L + P L+
Sbjct: 1138 RPKALLIVLGNPHVLVRDPCFGALL 1162
Score = 158 (60.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 945 LNDDQRRAIIKVLTAKDYAL---ILGMPGTGKTSTMVHAVKAL--LMRGASILLTSYTNS 999
LN++Q+ A+ ++L+ L + G PGTGKT T++ AV + + + IL+ + +NS
Sbjct: 745 LNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHFALPDSRILVCAPSNS 804
Query: 1000 AVDNLLIKLKSQSI----DFVRIGR----HEVVHKEIQKHCLSAMNINSVEEIKKRLDQV 1051
A D + ++L + VR+ E+V ++ +C E+I K +
Sbjct: 805 AADLVCLRLHESKVLQPATMVRVNATCRFEEIVIDAVKPYCRDG------EDIWKA-SRF 857
Query: 1052 KVVAVTCL--GITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS----KFVLVGDHY 1104
+++ TC G+ + + F +DEAGQ + P L PL S + VL GD
Sbjct: 858 RIIITTCSSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPLGLMSDISGQIVLAGDPM 917
Query: 1105 QLPPLVQSTEARENGMEISLFRRL 1128
QL P+++S A G+ +S RL
Sbjct: 918 QLGPVIKSRLAMAYGLNVSFLERL 941
Score = 57 (25.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 118 PEMLI--KLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSH 175
P+ L+ KL+ +D + + + ++ VS PE ++ +NSL H +
Sbjct: 301 PQNLVSCKLAGWDKSKQFRFQMLDKDQMCPVVSFVSVPEKEN--SSDENINSLNSH--TK 356
Query: 176 NKSKQPSPSPKAINRSLTTG 195
NK+ Q S S NR ++ G
Sbjct: 357 NKTSQMSESSLVNNRGISPG 376
Score = 37 (18.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 142 ERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPS 182
E +L V +P I V A S+ L + +K QP+
Sbjct: 782 EAVLQVHFALPDSRILVCAPSNSAADLVCLRLHESKVLQPA 822
>TAIR|locus:2059088 [details] [associations]
symbol:AT2G19120 "AT2G19120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009506 "plasmodesma" evidence=IDA] GO:GO:0009506
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0004386 GO:GO:0004519
eggNOG:COG1112 EMBL:AC002392 KO:K10706 InterPro:IPR026852
PANTHER:PTHR10887:SF27 IPI:IPI00542366 PIR:T00533
RefSeq:NP_179502.1 UniGene:At.52824 ProteinModelPortal:O64476
SMR:O64476 PaxDb:O64476 PRIDE:O64476 EnsemblPlants:AT2G19120.1
GeneID:816429 KEGG:ath:AT2G19120 TAIR:At2g19120
HOGENOM:HOG000084788 InParanoid:O64476 OMA:DWAALIS PhylomeDB:O64476
ProtClustDB:CLSN2683158 ArrayExpress:O64476 Genevestigator:O64476
Uniprot:O64476
Length = 1090
Score = 219 (82.2 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 82/268 (30%), Positives = 128/268 (47%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD+ ++DEA Q + L PL A++ VLVGD QLP V S A SLF R
Sbjct: 775 FDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQ 834
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ L QYRM I + + Y RL S+ I++A ++ + K+
Sbjct: 835 LAGCPTL-LLTVQYRMHPQIRDFPSRYFYQGRLK-DSESISSAPDEI--------YYKDP 884
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA--CL-IAKITQELVKNEIEGK-DIGIIT 1245
+ RP +F N + N EA C+ + Q+ +K+ GK +G+IT
Sbjct: 885 V--LRPYLFFNISHGRESHRGGSVSYENVDEARFCVGVYMHLQKTLKSLGAGKVSVGVIT 942
Query: 1246 PYNSQANLIRHSLS-------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
PY Q ++H + + I+T+D +QG+++D I++S VR+S + S
Sbjct: 943 PYKLQLKCLKHEFGNALGQDELKEIYINTVDAFQGQERDVIIMSCVRASGHGVGFVS--- 999
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSK 1326
D R+NVALTRA++ L ++G+ L K
Sbjct: 1000 -DIRRMNVALTRARRALWVMGNASALMK 1026
Score = 51 (23.0 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 962 YALILGMPGTGKTSTM 977
+ L+ G PGTGKT T+
Sbjct: 497 FTLVQGPPGTGKTHTV 512
>ZFIN|ZDB-GENE-070912-617 [details] [associations]
symbol:si:dkey-97a13.6 "si:dkey-97a13.6"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004540 "ribonuclease activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001900 InterPro:IPR003593 InterPro:IPR026855
Pfam:PF00773 SMART:SM00382 SMART:SM00955 ZFIN:ZDB-GENE-070912-617
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0004540
PANTHER:PTHR10887:SF16 GeneTree:ENSGT00550000074391 EMBL:BX663525
IPI:IPI00499390 RefSeq:XP_699251.2 UniGene:Dr.89869
Ensembl:ENSDART00000017829 GeneID:570654 KEGG:dre:570654
NextBio:20890238 Uniprot:E7F3B1
Length = 2781
Score = 216 (81.1 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 93/322 (28%), Positives = 146/322 (45%)
Query: 1041 VEEIKKRLDQVK--------VVAVTCLGITNPLLTDKKFDV--CIMDEAGQTTLPVSLGP 1090
+EE KK L+ + ++ TC +P L K ++DE T P +L P
Sbjct: 2451 IEEYKKLLNDARLHELERHDIILCTCTAAASPNLK-KTLSARQILIDECAMATEPQTLVP 2509
Query: 1091 LM-FA-SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
L+ F K VL+GDH QL P+V++ R GM SLF R + +AI L +QYRM +
Sbjct: 2510 LVSFKPEKVVLLGDHKQLRPIVKNNHVRRLGMTRSLFERYMD---RAIM-LDTQYRMHEE 2565
Query: 1149 IMELSNALIYGDRLSCGSDE---IANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP 1205
I + + Y D L E + NA+ + S L + + V+T
Sbjct: 2566 ICKFPSEAYYNDMLKTVVRERTSVLNAETEGRRQSKRI--LFGDIRGEEIGLVVSTARGN 2623
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSS 1262
+ + VE C+ Q + + +DI I++PYN+Q IR LS +
Sbjct: 2624 ENSKANFDEVKKAVEICI-----QLVTVGRVRPEDIAILSPYNAQVAQIRERLSDFELKG 2678
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSEN----P---RNCTSS---LLGDWHRINVALTRAK 1312
+ TI K QG + +++S VRS + P R S +GD ++INV +TRA+
Sbjct: 2679 FTVTTITKSQGSEWQYVILSIVRSCPSDEIEPMPSREWLSKHIGFVGDENQINVGITRAQ 2738
Query: 1313 KKLIMVGSCRTLSKVPLLKLLI 1334
L ++G+ L+ P + L+
Sbjct: 2739 VGLCILGNQAVLNCSPAWQKLL 2760
Score = 75 (31.5 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVD 1002
LI G GTGKT + A K L R + +L+ +YTNS+ D
Sbjct: 556 LIYGPFGTGKTLCLASAAKELAHRSQNKVLICTYTNSSAD 595
Score = 69 (29.3 bits), Expect = 5.2e-12, Sum P(5) = 5.2e-12
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKT 974
LN+ Q +A+ K L K + +I G PGTGKT
Sbjct: 2290 LNESQFKALEKALNGK-FTIIQGPPGTGKT 2318
Score = 45 (20.9 bits), Expect = 5.2e-12, Sum P(5) = 5.2e-12
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 131 DEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSH 175
+E+ W + ER LA + EN V + S L + TI +H
Sbjct: 189 NEIRWKFTITTERSLAHVALLKVENGAVFSLSDSLRN-TIPPITH 232
Score = 43 (20.2 bits), Expect = 5.2e-12, Sum P(5) = 5.2e-12
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 261 LQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQRSFVCHHKQ 305
L F IH + LHN + S +P NL + ++KQ
Sbjct: 491 LNRLSFCQIHQAIDRLPDLHNVLPDFSNCCVPVNLTKQSQLNNKQ 535
Score = 42 (19.8 bits), Expect = 5.2e-12, Sum P(5) = 5.2e-12
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 599 RVKIESKRNEINGMILPLEFKTGKI 623
R K+ +N + M++PL+ T KI
Sbjct: 1129 RKKLNPDQNLVPKMMIPLDHTTTKI 1153
Score = 40 (19.1 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 930 FSQDPALSYIWS-EKSLNDDQRRAIIKVLTAK 960
F+ P + +W+ +K N D R II ++T +
Sbjct: 97 FASSPEEAAVWNLQKHTNLDHR-TIIHLITQR 127
Score = 38 (18.4 bits), Expect = 6.2e-12, Sum P(4) = 6.2e-12
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 286 ISTWYIPYNLQRSFVCHHKQ 305
I W I ++L R +C K+
Sbjct: 2146 IKKWAIEFDLGRCLLCIRKR 2165
Score = 37 (18.1 bits), Expect = 6.4e-09, Sum P(5) = 6.4e-09
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 969 PGTGKTSTMVHAVKALLMRGASILLTSYTNS-------AVDN----LLIKLKSQSIDFVR 1017
PG + M+ + + S L+ YT++ D+ L K+ +Q ++ +
Sbjct: 1432 PGEREAHRMIEELNIMFNHEVSKFLSEYTDTKSCTPLRCQDSPNAEALEKISNQHMELIP 1491
Query: 1018 IGRHEVVHKEIQK 1030
H H E Q+
Sbjct: 1492 FSSHLTFHLERQR 1504
>RGD|1304735 [details] [associations]
symbol:Mov10l1 "Mov10l1, Moloney leukemia virus 10-like 1,
homolog (mouse)" species:10116 "Rattus norvegicus" [GO:0007281
"germ cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007517 "muscle organ development" evidence=ISO]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0045786
"negative regulation of cell cycle" evidence=ISO] RGD:1304735
GeneTree:ENSGT00550000074391 InterPro:IPR026125
PANTHER:PTHR10887:SF6 IPI:IPI00560261 Ensembl:ENSRNOT00000050620
ArrayExpress:F1M357 Uniprot:F1M357
Length = 550
Score = 216 (81.1 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 85/320 (26%), Positives = 145/320 (45%)
Query: 1047 RLDQVKVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS----KFVL 1099
R + +++ TC G+ + + F +DEAGQ + P L PL S + VL
Sbjct: 218 RASRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVL 277
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEE----------------HPQAISALQSQY 1143
GD QL P+++S A G+ +S+ RL +P ++ L Y
Sbjct: 278 AGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKNY 337
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
R ++ L + L Y L + A+ K+ S L W K P+IF
Sbjct: 338 RSHSALLALPSRLFYHREL----EVCADPKVVTSLLG----WEKLPRKGF-PLIFHGVRG 388
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKN---EIEGKDIGIITPYNSQANLIR---HS 1257
A E + + P EA + + L +N ++ KDIG+ITPY Q I+ +
Sbjct: 389 NEAREGRSPSWFS-PAEAVQVMRYCCLLARNVSSQVSSKDIGVITPYRKQVEKIKILLRN 447
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG---DWHRINVALTRAKKK 1314
+ ++ +++ +++++QG++ I++S VRS+E+ LG + R NVA+TR K
Sbjct: 448 VDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKAL 507
Query: 1315 LIMVGSCRTLSKVPLLKLLI 1334
LI++G+ L + P L+
Sbjct: 508 LIVLGNPHVLVRDPCFGALL 527
Score = 158 (60.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 58/204 (28%), Positives = 100/204 (49%)
Query: 945 LNDDQRRAIIKVLTAKDYAL---ILGMPGTGKTSTMVHAVKAL--LMRGASILLTSYTNS 999
LN++Q+ A+ ++L+ L + G PGTGKT T++ AV + + + IL+ + +NS
Sbjct: 110 LNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNS 169
Query: 1000 AVDNLLIKLKSQSI----DFVRIGR----HEVVHKEIQKHCLSAMNINSVEEIKKRLDQV 1051
A D + ++L + VR+ E + + I+ +C E+I R +
Sbjct: 170 AADLVCLRLHESKVLKPAAMVRVNATCRFEETIIEAIKPYCRDG------EDIW-RASRF 222
Query: 1052 KVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS----KFVLVGDHY 1104
+++ TC G+ + + F +DEAGQ + P L PL S + VL GD
Sbjct: 223 RIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPM 282
Query: 1105 QLPPLVQSTEARENGMEISLFRRL 1128
QL P+++S A G+ +S+ RL
Sbjct: 283 QLGPVIKSRLAMAYGLNVSMLERL 306
Score = 42 (19.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 14/77 (18%), Positives = 29/77 (37%)
Query: 35 NSSKN--VDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPD 92
N +KN +++ +N + + ++ RN S K + + +NT +
Sbjct: 14 NITKNDGQSITNITKNDGQSITKVTRNDGQSITNITRNDGQSITKNKKTVKDQTKNTTKE 73
Query: 93 NILPIDDETNSTHHSPE 109
L D+ T + E
Sbjct: 74 RHLSTTDQPEKTASTAE 90
>RGD|1589127 [details] [associations]
symbol:LOC684558 "similar to regulator of nonsense transcripts
1" species:10116 "Rattus norvegicus" [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0009048 "dosage compensation by inactivation of X chromosome"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0044530 "supraspliceosomal complex" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=IEA]
GO:GO:0006260 GO:GO:0006281 GO:GO:0000785 GO:GO:0003682
GO:GO:0007049 GO:GO:0071044 GO:GO:0009048 GO:GO:0004004
GO:GO:0035145 GeneTree:ENSGT00550000074391 IPI:IPI00767398
PRIDE:F1LY19 Ensembl:ENSRNOT00000027268 Uniprot:F1LY19
Length = 391
Score = 205 (77.2 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 58/162 (35%), Positives = 88/162 (54%)
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
P +P+ F T + LN EA + KIT +L+K + IGIITPY Q
Sbjct: 15 PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQR 73
Query: 1252 N-LIR--------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+ L++ H+ VEI ++D +QGR+KD I++S VR++E+ L D
Sbjct: 74 SYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQG---IGFLNDPR 130
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 131 RLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 172
>FB|FBgn0033889 [details] [associations]
symbol:CG6701 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR007087 InterPro:IPR015880
PROSITE:PS00028 SMART:SM00355 GO:GO:0008270 GO:GO:0005622
FlyBase:FBgn0033889 ChiTaRS:CG6701 EMBL:AY128442
ProteinModelPortal:Q8MQQ9 STRING:Q8MQQ9 PRIDE:Q8MQQ9
InParanoid:Q8MQQ9 ArrayExpress:Q8MQQ9 Bgee:Q8MQQ9 Uniprot:Q8MQQ9
Length = 1261
Score = 192 (72.6 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 78/274 (28%), Positives = 133/274 (48%)
Query: 1076 MDEAGQTT-LPVSLGPLMFAS---KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS-- 1129
+DEA +T V +G S +L GDH QL P++QS A E G+ ++LF RL
Sbjct: 692 VDEAAASTEAEVLMGITCTLSPTLNLILSGDHKQLGPVLQSQRANEWGLGLTLFERLLQR 751
Query: 1130 -----EEHPQAISALQSQ----YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
EE +++Q++ +R I+ L N + Y L A +++ +
Sbjct: 752 KCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLR------TEAPMEI--VC 803
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK- 1239
W N P++F ++ K +L N E ++ ++L+ + G+
Sbjct: 804 RFHNWFYLP-NATFPIMF-HSVFGTTMNTKSSVSLCNNKEIDVVMDYVKDLMYFGLNGEK 861
Query: 1240 ----DIGIITPYNSQANLIRHSLSV---SSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
DIGII+PY +Q I+ L++ S ++ +++ +QG++K I+VSFVRS P+
Sbjct: 862 LLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGKEKHVIIVSFVRSF-TPK- 919
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L + R+NV L+R LI++G+ RTLS+
Sbjct: 920 --LGFLNNERRLNVLLSRPISLLILIGNPRTLSQ 951
Score = 89 (36.4 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 944 SLNDDQRRAIIKVLTA---KDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTN 998
S N +Q +A+ ++ + K ++ G PGTGKTST+V A+ L + IL+ + +N
Sbjct: 539 STNPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSN 598
Query: 999 SAVDNLLIKL 1008
+A D + ++L
Sbjct: 599 TACDEVALRL 608
Score = 50 (22.7 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 23/107 (21%), Positives = 43/107 (40%)
Query: 86 LENTP-PDNILPIDDETNSTH-HSPEISKRFKFSPEMLIKLSQYDGGDEVTWNISPVNER 143
+ NTP +L ++++ ST+ + ++ SP + K G T S + E
Sbjct: 521 IPNTPLASGVLQLNNKLISTNPEQMQAVRQIALSPRL--KAPYIVFGPPGTGKTSTIVEA 578
Query: 144 LLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPSPKAINR 190
+ + P +I VLA S+ + +K P P+ + R
Sbjct: 579 IYQLYINRPETHILVLAGSNTACDEVALRLLRAIAKAPQSQPRPLTR 625
Score = 37 (18.1 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 417 VIAPGDTVNVIGE 429
+++PGD V +I E
Sbjct: 395 ILSPGDDVLIINE 407
>TAIR|locus:2152627 [details] [associations]
symbol:AT5G37030 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] EMBL:CP002688 GO:GO:0004519 KO:K10706
IPI:IPI00540124 RefSeq:NP_198519.1 UniGene:At.55172
ProteinModelPortal:F4K5V7 SMR:F4K5V7 PRIDE:F4K5V7
EnsemblPlants:AT5G37030.1 GeneID:833673 KEGG:ath:AT5G37030
Uniprot:F4K5V7
Length = 638
Score = 209 (78.6 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 79/270 (29%), Positives = 126/270 (46%)
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
+V ++DEA Q S+ L +L+GD +QLP +V + + + SLF RL
Sbjct: 349 EVLVVDEAAQLKECESVAALQLPGLRHAILIGDEFQLPAMVHNDQCEKAKFGRSLFERLV 408
Query: 1130 E-EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
H + + L QYRM I YG R+ + AN + + +L+
Sbjct: 409 LLGHKKHL--LDVQYRMHPSISRFPYKEFYGGRIK----DAANVQESIYQ----KRFLQG 458
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK---DIGIIT 1245
N F+N E D + N VE ++++I L K E K +G+IT
Sbjct: 459 --NMFGSFSFINVGR-GKEEFGDGDSPKNMVEVAVVSEIISNLFKVSRERKMKMSVGVIT 515
Query: 1246 PYNSQANLIRH-------SLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
PY Q I+ SLS + +V + ++D +QG ++D I++S VRS+ N +
Sbjct: 516 PYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQGGEEDIIIISTVRSNSNGK---VG 572
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L + R NVALTRA+ L ++G+ TL++
Sbjct: 573 FLSNRQRANVALTRARHCLWVIGNESTLAR 602
Score = 49 (22.3 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAVK 982
S + Q+ L I S K LN Q AI+ L +D + + G KT T+ +
Sbjct: 187 SSRTWGQN-VLDIIRSSK-LNSSQEAAILSCLETRDSNHKNSVKLIWGPLKTKTVATLLL 244
Query: 983 ALLMRGASILLTSYTNSAVDNLLIKLKSQS 1012
LL ++ + TN+A+ + +L + S
Sbjct: 245 VLLKLRCKTVVCAPTNTAIVEVTSRLLALS 274
Score = 44 (20.5 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 49 PNSDLIHSVSSPN 61
PN DLI SV PN
Sbjct: 166 PNFDLIQSVLQPN 178
>TAIR|locus:2126480 [details] [associations]
symbol:AT4G30100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009506 "plasmodesma"
evidence=IDA] GO:GO:0009506 EMBL:CP002687 EMBL:AL161576
GO:GO:0004519 eggNOG:COG1112 EMBL:AL078464 KO:K10706
InterPro:IPR026852 PANTHER:PTHR10887:SF27 HOGENOM:HOG000084788
ProtClustDB:CLSN2683158 IPI:IPI00535923 PIR:T08986
RefSeq:NP_194739.1 UniGene:At.31859 ProteinModelPortal:Q9SZW3
SMR:Q9SZW3 STRING:Q9SZW3 PaxDb:Q9SZW3 PRIDE:Q9SZW3
EnsemblPlants:AT4G30100.1 GeneID:829133 KEGG:ath:AT4G30100
TAIR:At4g30100 InParanoid:Q9SZW3 PhylomeDB:Q9SZW3
ArrayExpress:Q9SZW3 Genevestigator:Q9SZW3 Uniprot:Q9SZW3
Length = 1311
Score = 210 (79.0 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 81/268 (30%), Positives = 131/268 (48%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD+ ++DEA Q + L PL A++ VLVGD QLP V S A SLF R
Sbjct: 938 FDMVVIDEAAQASEVGVLPPLALGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQ 997
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ L QYRM I + + Y RL+ S+ ++ A ++ + K++
Sbjct: 998 LAGCPTL-LLTVQYRMHPQIRDFPSRYFYQGRLT-DSESVSTAPDEI--------YYKDS 1047
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA--CLIAKI-TQELVKNEIEGK-DIGIIT 1245
+ +P +F + + N EA C+ + Q +K+ GK +G+IT
Sbjct: 1048 V--LKPYLFFDISHGRESHRGGSVSYENIDEARFCVGVYLHLQRTLKSLGGGKVSVGVIT 1105
Query: 1246 PYNSQANLIR----HSLS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
PY Q ++ ++LS + + I+T+D +QG+++D I++S VR+S N +
Sbjct: 1106 PYKLQLKCLKIEFGNALSQDELQEIYINTVDAFQGQERDVIIMSCVRAS----NHGVGFV 1161
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSK 1326
D R+NVALTRAK+ L ++G+ L K
Sbjct: 1162 ADIRRMNVALTRAKRALWVMGNASALMK 1189
Score = 54 (24.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 962 YALILGMPGTGKTSTM------VHAVK------ALLMRGASILLTSYTNSAVDNLLIKLK 1009
+ L+ G PGTGKT T+ +H V+ +LL + A S+ DN++
Sbjct: 661 FTLVQGPPGTGKTHTVWGMLNVIHLVQYQQYYTSLLKKLAPESYKQVNESSSDNIV---- 716
Query: 1010 SQSIDFVRIGRHEVVHKEIQKHC 1032
S SID V + + + + K C
Sbjct: 717 SGSIDEVLQNMDQNLFRTLPKLC 739
>UNIPROTKB|I6L9H4 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
UniGene:Hs.370140 UniGene:Hs.569824 HGNC:HGNC:16878 ChiTaRS:HELZ
EMBL:BC094881 ProteinModelPortal:I6L9H4 Ensembl:ENST00000579953
Uniprot:I6L9H4
Length = 1163
Score = 161 (61.7 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 81/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 736 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 793
Query: 1076 MDEAGQTTLPVSLGPLMFAS---KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+ + VL GDH QL P V S ARE + +SL RL E +
Sbjct: 794 LDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 853
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 854 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 911
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 912 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 959
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 960 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1019
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1050
Score = 96 (38.9 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 925 DSGSVF---SQDPALSYI----WSEK---SLNDDQRRAIIKVLTAKDY----ALILGMPG 970
D+G +F S P + + W E+ LN Q+ A++ + T LI+G G
Sbjct: 612 DNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYG 671
Query: 971 TGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIK 1007
TGKT T+ AVK +L + + IL+ +++NSA D L IK
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAAD-LYIK 709
Score = 42 (19.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + ++ T T V I+ K++ F+R+ R ++ C
Sbjct: 529 TKVNAVYLLPVPKQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDC 585
>MGI|MGI:1891384 [details] [associations]
symbol:Mov10l1 "Moloney leukemia virus 10-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007517 "muscle organ development" evidence=IDA]
[GO:0008283 "cell proliferation" evidence=IDA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0045786 "negative regulation
of cell cycle" evidence=IDA] MGI:MGI:1891384 GO:GO:0005524
GO:GO:0005737 GO:GO:0008283 GO:GO:0007283 GO:GO:0007517
GO:GO:0004386 eggNOG:COG1112 GO:GO:0045786 CTD:54456
HOVERGEN:HBG052382 KO:K13983 InterPro:IPR026125
PANTHER:PTHR10887:SF6 EMBL:AF285587 EMBL:AF340211 EMBL:AY303754
EMBL:AK084786 IPI:IPI00118099 IPI:IPI00227971 IPI:IPI00453884
RefSeq:NP_112550.2 UniGene:Mm.358791 ProteinModelPortal:Q99MV5
SMR:Q99MV5 STRING:Q99MV5 PhosphoSite:Q99MV5 PaxDb:Q99MV5
PRIDE:Q99MV5 DNASU:83456 GeneID:83456 KEGG:mmu:83456
HOGENOM:HOG000015363 InParanoid:Q99MV5 NextBio:350584
CleanEx:MM_MOV10L1 Genevestigator:Q99MV5
GermOnline:ENSMUSG00000015365 Uniprot:Q99MV5
Length = 1187
Score = 215 (80.7 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 84/320 (26%), Positives = 145/320 (45%)
Query: 1047 RLDQVKVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS----KFVL 1099
R + +++ TC G+ + + F +DEAGQ + P L PL S + VL
Sbjct: 855 RASRFRIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVL 914
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEE----------------HPQAISALQSQY 1143
GD QL P+++S A G+ +S+ RL +P ++ L Y
Sbjct: 915 AGDPMQLGPVIKSRLAMAYGLNVSMLERLMSRPAYLRDENAFGACGAYNPLLVTKLVKNY 974
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
R ++ L + L Y L + A+ K+ S L W K P+IF
Sbjct: 975 RSHSALLALPSRLFYHREL----EVCADPKVVTSLLG----WEKLPRKGF-PLIFHGVRG 1025
Query: 1204 LPAYEAKDHQTLNNPVEACLIAK---ITQELVKNEIEGKDIGIITPYNSQANLIR---HS 1257
A E + + P EA + + + V +++ KDIG+ITPY Q I+ +
Sbjct: 1026 NEAREGRSPSWFS-PAEAVQVMRYCCLLARSVSSQVSSKDIGVITPYRKQVEKIKILLRN 1084
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG---DWHRINVALTRAKKK 1314
+ ++ +++ +++++QG++ I++S VRS+E+ LG + R NVA+TR K
Sbjct: 1085 VDLTDIKVGSVEEFQGQEYLVIVISTVRSNEDRFEDDRYFLGFLSNSKRFNVAITRPKAL 1144
Query: 1315 LIMVGSCRTLSKVPLLKLLI 1334
LI++G+ L + P L+
Sbjct: 1145 LIILGNPHVLVRDPCFGALL 1164
Score = 157 (60.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 58/204 (28%), Positives = 99/204 (48%)
Query: 945 LNDDQRRAIIKVLTAKDYAL---ILGMPGTGKTSTMVHAVKAL--LMRGASILLTSYTNS 999
LN++Q+ A+ ++L+ L + G PGTGKT T++ AV + + + IL+ + +NS
Sbjct: 747 LNENQKLAVRRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHYALPDSRILVCAPSNS 806
Query: 1000 AVDNLLIKLKSQSID----FVRIGR----HEVVHKEIQKHCLSAMNINSVEEIKKRLDQV 1051
A D + ++L + VR+ E + I+ +C E+I R +
Sbjct: 807 AADLVCLRLHESKVPKPAAMVRVNATCRFEETIIDAIKPYCRDG------EDIW-RASRF 859
Query: 1052 KVVAVTC--LGITNPL-LTDKKFDVCIMDEAGQTTLPVSLGPLMFAS----KFVLVGDHY 1104
+++ TC G+ + + F +DEAGQ + P L PL S + VL GD
Sbjct: 860 RIIITTCSSAGLFYQIGVRVGYFTHVFVDEAGQASEPECLIPLGLISDINGQIVLAGDPM 919
Query: 1105 QLPPLVQSTEARENGMEISLFRRL 1128
QL P+++S A G+ +S+ RL
Sbjct: 920 QLGPVIKSRLAMAYGLNVSMLERL 943
Score = 50 (22.7 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING 611
S+GLK +++ V+D E K KG+ D+S RV I + + G
Sbjct: 35 SNGLKAIRVEAVSDKWEDD--SKNSSKGLSDSSPRVLIGCVTSMLEG 79
Score = 39 (18.8 bits), Expect = 1.0e-11, Sum P(3) = 1.0e-11
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
VL K L+L +PG ++ ++A L+++
Sbjct: 498 VLKRKGDLLVLEVPGLAESRPSLYAGDKLILK 529
>UNIPROTKB|F1NPN9 [details] [associations]
symbol:LOC100857488 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:AADN02030025 IPI:IPI00575663
Ensembl:ENSGALT00000005876 Uniprot:F1NPN9
Length = 1931
Score = 164 (62.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 82/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 724 KTVHPVVHQYCLIS-STHSTFQMPQKEDILKQRVVVVT-LNTSQYLCQLDLEPGFFTHIL 781
Query: 1076 MDEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+K VL GDH QL P V S ARE + +SL RL E +
Sbjct: 782 LDEAAQAMECETIMPLALANKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 841
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 842 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 899
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 900 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 947
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 948 QVFRIRAELRKKRLSDVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKRKEQLLED 1007
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1008 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1038
Score = 97 (39.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 29/77 (37%), Positives = 43/77 (55%)
Query: 940 WSEK---SLNDDQRRAIIKVLTAKDY----ALILGMPGTGKTSTMVHAVKALLMRG--AS 990
W E+ LN Q+ A++ + T LI+G GTGKT T+ AVK +L + +
Sbjct: 622 WDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYGTGKTFTLAQAVKHILQQQDTSR 681
Query: 991 ILLTSYTNSAVDNLLIK 1007
IL+ +++NSA D L IK
Sbjct: 682 ILICTHSNSAAD-LYIK 697
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + T T V I+ K++ F+R+ R ++ C
Sbjct: 517 TKVNAVYLLPVTKEKSAQTQGTKEKVYEAAIEEKTKDYIFLRVSRECCEELNLRADC 573
>ZFIN|ZDB-GENE-091230-8 [details] [associations]
symbol:mov10a "Moloney leukemia virus 10, homolog, a"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 SMART:SM00382 ZFIN:ZDB-GENE-091230-8
GO:GO:0005524 GO:GO:0017111 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:CU469362
IPI:IPI00481619 RefSeq:XP_002662576.2 UniGene:Dr.155704
Ensembl:ENSDART00000064826 GeneID:566858 KEGG:dre:566858 CTD:566858
NextBio:20888414 Bgee:E7FAV9 Uniprot:E7FAV9
Length = 1001
Score = 150 (57.9 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 40/114 (35%), Positives = 63/114 (55%)
Query: 1240 DIGIITPYNSQANLIRHSLSV-------SSVEIHTIDKYQGRDKDCILVSFVRSSEN--- 1289
DIGII PY Q IR +L+ +++ +++++QG+++ I+VS VRSS N
Sbjct: 842 DIGIIAPYRKQVEKIRKALNTVGELKKWKDIKVGSVEEFQGQERKVIIVSTVRSSVNYVK 901
Query: 1290 -PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
++ L + R NVA+TRAK LI+VG+ LSK P + I ++ G
Sbjct: 902 MDQDFNIGFLSNEKRFNVAMTRAKGLLIVVGNPVILSKDPTWQKFIQYCEQEQG 955
Score = 104 (41.7 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 50/177 (28%), Positives = 79/177 (44%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAV 981
D + S+ P LS + N +Q+ A+ +L+ LI G PGTGKT T+V A+
Sbjct: 496 DKDTGHSELPHLSMFNKDLENNPEQKAAVQHILSGSSRPAPYLIFGPPGTGKTVTVVEAI 555
Query: 982 KALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKE---IQKHCLSAM 1036
K + A IL + +NSA D L +L +D RI R ++ + + L
Sbjct: 556 KQVDKSKAQSHILACAPSNSACDLLCERLLGH-VDAHRIYRLCAPSRDPRTVPQKLLKHS 614
Query: 1037 NINSVEEI-----KKRLDQVKVVAVTCL--G-ITNPLLTDKKFDVCIMDEAGQTTLP 1085
N N ++ K+ L ++ VT + G + + + F +DEAGQ P
Sbjct: 615 NWNEAQDSFLLPSKETLIGYSIIVVTLVTAGRLVSGGVAMGHFTHIFIDEAGQAVEP 671
Score = 100 (40.3 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 76/307 (24%), Positives = 126/307 (41%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKE---IQKHCLSAMNINSVEEI--- 1044
IL + +NSA D L +L +D RI R ++ + + L N N ++
Sbjct: 567 ILACAPSNSACDLLCERLLGH-VDAHRIYRLCAPSRDPRTVPQKLLKHSNWNEAQDSFLL 625
Query: 1045 --KKRLDQVKVVAVTCL--G-ITNPLLTDKKFDVCIMDEAGQTTLP---VSLGPLM--FA 1094
K+ L ++ VT + G + + + F +DEAGQ P + + L+
Sbjct: 626 PSKETLIGYSIIVVTLVTAGRLVSGGVAMGHFTHIFIDEAGQAVEPECIIGIAGLLDPLK 685
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL--------------SEEHPQAISALQ 1140
+ VL GD QL P+++S A+ +G+ SL RL S+ + ++ L
Sbjct: 686 GQLVLAGDPQQLGPVLRSPLAQLHGLGQSLLERLMKRNALYQKSQDDNSKYDSRFVTKLL 745
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIF 1198
YR I+++ N L Y + L ++++ C W E L P + PV+F
Sbjct: 746 RNYRSHPAILKIPNELFYENELQVFANQMEREAF-------CQ-W--EHL-PRKGFPVVF 794
Query: 1199 VNTDMLPAYEAKDHQTLN-NPVEACL--IAKITQELVKN---EIEGKDIGIITPYNSQAN 1252
EA N +E + + + Q K ++ DIGII PY Q
Sbjct: 795 HGVMGKDEREANSPSFFNVTEIEVIVNYLNNLMQTQGKKGLPKLGPNDIGIIAPYRKQVE 854
Query: 1253 LIRHSLS 1259
IR +L+
Sbjct: 855 KIRKALN 861
Score = 51 (23.0 bits), Expect = 7.8e-06, Sum P(3) = 7.8e-06
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 636 VILYTLLMSERYLKH-IDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTT 694
+I+ TL+ + R + + G ++ D+ G V+ ++G+ + ++ A
Sbjct: 636 IIVVTLVTAGRLVSGGVAMGHFTHIFIDEA-GQAVEPECIIGIAGLLDPLKGQLVLAGDP 694
Query: 695 QQLPPMLRA 703
QQL P+LR+
Sbjct: 695 QQLGPVLRS 703
Score = 44 (20.5 bits), Expect = 9.7e-11, Sum P(3) = 9.7e-11
Identities = 25/101 (24%), Positives = 43/101 (42%)
Query: 106 HSPEISKRFK-FSPEMLIKLSQYDGGDEVTWNIS--PVN--ERLLAVSKQMPPENIRVLA 160
H E+ K FS ++L K D V +NI+ P+ R + ++ Q N+ +
Sbjct: 437 HRVELDKVILGFSRKLLQKFVNNMKFD-VEFNINRFPLRLQHRAVELAVQHALGNVLFPS 495
Query: 161 NSSRLNSLTIHQCSHNKSKQPSPSPKAINRSLTTGRKRVNP 201
+ +S H NK + +P KA + + +G R P
Sbjct: 496 DKDTGHSELPHLSMFNKDLENNPEQKAAVQHILSGSSRPAP 536
Score = 41 (19.5 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 642 LMSERYLKHIDSGLLYYL 659
L+ ER L H+D+ +Y L
Sbjct: 579 LLCERLLGHVDAHRIYRL 596
Score = 40 (19.1 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 1027 EIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP-LLTDKKFDVCIMDEAGQ 1081
+I+K+ L + ++++ K+L +KV V P +L K +VC+ D+ Q
Sbjct: 376 DIKKYDLYGKTM-TLDKTNKKLLILKVPGVA---ENRPSVLRGDKLNVCLSDDRNQ 427
Score = 37 (18.1 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 969 PGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDNLLIKLKSQSID 1014
PGT K +V ++A++ G A L + N ++ KS+ ++
Sbjct: 246 PGTAKPFCIVRELEAVVRTGLAETLGPESPYNPKQNRRLRPKSKVVE 292
>RGD|1307049 [details] [associations]
symbol:Helz "helicase with zinc finger" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 RGD:1307049
GO:GO:0008270 GO:GO:0003676 CTD:9931 OrthoDB:EOG4NP72K OMA:YRVALLY
GeneTree:ENSGT00550000074391 IPI:IPI00364329 RefSeq:NP_001099318.2
ProteinModelPortal:D4ADZ6 Ensembl:ENSRNOT00000030300 GeneID:287773
KEGG:rno:287773 Uniprot:D4ADZ6
Length = 1964
Score = 164 (62.8 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 82/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 736 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 793
Query: 1076 MDEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+K VL GDH QL P V S ARE + +SL RL E +
Sbjct: 794 LDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 853
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 854 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 911
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 912 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 959
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 960 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1019
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1050
Score = 95 (38.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 925 DSGSVF---SQDPALSYI----WSEK---SLNDDQRRAIIKVLTAKDY----ALILGMPG 970
D+G +F S P + + W E+ LN Q+ A++ + T LI+G G
Sbjct: 612 DNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLCIQLPPVLIIGPYG 671
Query: 971 TGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIK 1007
TGKT T+ AVK +L + + IL+ +++NSA D L IK
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAAD-LYIK 709
Score = 40 (19.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + ++ + T V I+ K++ F+RI R ++ C
Sbjct: 529 TRVNAVYLLPVPKEKLVQSQGTKEKVYEATIEEKTKDYVFLRISRECCEELSLRPDC 585
>UNIPROTKB|J3QS41 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 EMBL:AC005544 EMBL:AC007448
HGNC:HGNC:16878 ChiTaRS:HELZ Ensembl:ENST00000580168 Uniprot:J3QS41
Length = 1943
Score = 161 (61.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 81/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 736 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 793
Query: 1076 MDEAGQTTLPVSLGPLMFAS---KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+ + VL GDH QL P V S ARE + +SL RL E +
Sbjct: 794 LDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 853
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 854 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 911
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 912 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 959
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 960 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1019
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1020 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1050
Score = 96 (38.9 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 34/99 (34%), Positives = 52/99 (52%)
Query: 925 DSGSVF---SQDPALSYI----WSEK---SLNDDQRRAIIKVLTAKDY----ALILGMPG 970
D+G +F S P + + W E+ LN Q+ A++ + T LI+G G
Sbjct: 612 DNGVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLAIQLPPVLIIGPYG 671
Query: 971 TGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIK 1007
TGKT T+ AVK +L + + IL+ +++NSA D L IK
Sbjct: 672 TGKTFTLAQAVKHILQQQETSRILICTHSNSAAD-LYIK 709
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + ++ T T V I+ K++ F+R+ R ++ C
Sbjct: 529 TKVNAVYLLPVPKQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDC 585
>WB|WBGene00016566 [details] [associations]
symbol:eri-7 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0019079 "viral
genome replication" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR003593 SMART:SM00382 GO:GO:0000166 GO:GO:0000003
GO:GO:0017111 InterPro:IPR014001 SMART:SM00487 EMBL:FO080509
GeneTree:ENSGT00700000104572 PIR:T28788 RefSeq:NP_491374.2
ProteinModelPortal:O01976 SMR:O01976 EnsemblMetazoa:C41D11.7
GeneID:172047 KEGG:cel:CELE_C41D11.7 UCSC:C41D11.7.1 CTD:172047
WormBase:C41D11.7 InParanoid:O01976 OMA:NDEEMIN NextBio:873807
ArrayExpress:O01976 Uniprot:O01976
Length = 625
Score = 161 (61.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 69/256 (26%), Positives = 120/256 (46%)
Query: 1027 EIQKHCLSAMNINSVEEIKKRLDQVKV----VAVTCLGIT--NPLLTDKKFD--VCIMDE 1078
EI ++ L M + + ++ + + VA +G + + ++ KKFD +CI+DE
Sbjct: 180 EITENVLDEMRQSIINRVRNEVGAEVIGNVRVAFATIGASFVDFVMKHKKFDPCLCIIDE 239
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ-AI 1136
A Q + P ++ K V+ GD QLP LV + EA+ G++ S+ R+ E+ +
Sbjct: 240 AAQV-MEAQTWPAVYKMKRIVMAGDPKQLPALVFTDEAKAFGLQNSVMDRILEKKNNFSW 298
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV 1196
L++QYR I SN Y ++L ++ + + + + P K+ N P+
Sbjct: 299 IMLENQYRSNAKIATWSNTCFYHNQLKT---DVKCHEYSLHTILNPQP--KKFRNLFDPL 353
Query: 1197 IFVNTDM-------LPAYEAK--DHQTLNNPVE----ACLI-AKIT----QELVKNEIEG 1238
+ ++T + L YE D ++N + A L AKI Q L+K ++
Sbjct: 354 VLIDTSLERDVEKRLETYEHAVFDTNSINKTKQGFSYANLAEAKIAIGHYQRLLKYGVQP 413
Query: 1239 KDIGIITPYNSQANLI 1254
DI IITPY Q +L+
Sbjct: 414 SDIAIITPYKGQTSLV 429
Score = 138 (53.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 36/114 (31%), Positives = 58/114 (50%)
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVE----------IH 1266
N EA + Q L+K ++ DI IITPY Q +L+ + E I
Sbjct: 392 NLAEAKIAIGHYQRLLKYGVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQTTIG 451
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
T+D QG++ + ++ + VRS NPR T + + R+NV +TRAK+ + +G+
Sbjct: 452 TVDSVQGKEYEVVIFTMVRS--NPRK-TMGFVSELRRLNVVITRAKRHFMFIGN 502
Score = 82 (33.9 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 27/115 (23%), Positives = 56/115 (48%)
Query: 946 NDDQRRAIIKVLTA-KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
N+ QR AI L + I G PGTGKT T+ + L+ + +++ + T A+ N+
Sbjct: 67 NEKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANI 126
Query: 1005 -LIKLKSQSIDFVRIGRHEVV----HKE-IQKHCLSAMNINSVEEIKKRLDQVKV 1053
++ K+ +++ H ++ +++ I K + M V +++K D ++
Sbjct: 127 RMMTKKTLKRMGIKVHEHALMDTNEYRDVINKSDRALMAAEEVRDLRKAFDNGEI 181
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNI 519
+ +I AG K++P + F +E LQ ++
Sbjct: 255 MKRIVMAGDPKQLPALVFTDEAKAFGLQNSV 285
Score = 43 (20.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 233 YYHDKLANGVACNGASDHLGLRHTKKVLLQTYD 265
+YH++L V C+ S H L K +D
Sbjct: 319 FYHNQLKTDVKCHEYSLHTILNPQPKKFRNLFD 351
>UNIPROTKB|Q886X0 [details] [associations]
symbol:PSPTO_1455 "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016853 GenomeReviews:AE016853_GR eggNOG:COG1112
InterPro:IPR024402 Pfam:PF10881 RefSeq:NP_791281.1
ProteinModelPortal:Q886X0 GeneID:1183092 KEGG:pst:PSPTO_1455
PATRIC:19994154 HOGENOM:HOG000273296 OMA:HYRCHPK
ProtClustDB:CLSK879830 BioCyc:PSYR223283:GJIX-1482-MONOMER
Uniprot:Q886X0
Length = 758
Score = 129 (50.5 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 31/98 (31%), Positives = 58/98 (59%)
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
G QD ++I+ LN+ Q +A+ + +++ +LI G PGTGKT T+++ + +L+
Sbjct: 13 GQPVQQDSPGNFIFPF-GLNESQLKAVEQAFSSQ-ISLIEGPPGTGKTQTILNIIANILL 70
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFV--RIGRHE 1022
+G ++ + S N+AV N+ KL +D++ R+G E
Sbjct: 71 QGKTVAVVSNNNAAVKNVYEKLGKCGLDYLVARLGNKE 108
Score = 102 (41.0 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 1237 EGKD-IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS-ENPRNCT 1294
EG+D G I P+ +QA L L + T+ K+QGR+ D I+ S V ++P
Sbjct: 479 EGEDGRGFIAPFKNQATLSGSCLPADFIN-DTVHKFQGRECDEIVFSTVLDKHKSPERL- 536
Query: 1295 SSLLGDWHRINVALTRAKKKLIMV 1318
S + D +NVA++RAK + +V
Sbjct: 537 -SFVDDARMVNVAVSRAKNRFTLV 559
Score = 61 (26.5 bits), Expect = 6.8e-11, Sum P(3) = 6.8e-11
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
L + V+ + I N L D I+DEA Q + + L A ++VGD QL
Sbjct: 310 LKRYPVIGSSTHSIVNSLGGKAVLDYVIIDEASQQDIVPGVLALSCAKNLIIVGDRKQL 368
>ZFIN|ZDB-GENE-060526-371 [details] [associations]
symbol:mov10b.2 "Moloney leukemia virus 10,
homolog, b.2" species:7955 "Danio rerio" [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISS] [GO:0035279 "mRNA cleavage
involved in gene silencing by miRNA" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] ZFIN:ZDB-GENE-060526-371
GO:GO:0005524 GO:GO:0003723 GO:GO:0004386 GO:GO:0000932
GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 EMBL:BX323059
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 IPI:IPI00611260
RefSeq:NP_001037805.1 UniGene:Dr.94434 ProteinModelPortal:Q1LXK5
Ensembl:ENSDART00000078491 GeneID:555950 KEGG:dre:555950 CTD:555950
InParanoid:Q1LXK5 NextBio:20881245 Uniprot:Q1LXK5
Length = 1015
Score = 145 (56.1 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 71/267 (26%), Positives = 115/267 (43%)
Query: 1078 EAGQTTL---PVSLGPLMFASKFVLVG-DHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
E GQ L P LGP++ + + G D L L+ + + G ++ R
Sbjct: 698 EKGQLVLAGDPKQLGPILRSPLAINHGLDVSLLERLMTQNDLYKRG-DVEFDNRY----- 751
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+S L YR I+E+ N L Y L +DEI++ + C W + +
Sbjct: 752 --VSKLIMNYRSHPYILEVPNRLFYDGELKACADEISSNQY-------CM-W-EHLPSKG 800
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG------KDIGIITPY 1247
PVIF E+ N L+ + + L+ +G KDIGII PY
Sbjct: 801 FPVIFHGVPGKDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPY 860
Query: 1248 NSQANLIRHSLS----------VSSVEIHTIDKYQGRDKDCILVSFVRSSEN----PRNC 1293
Q I+ ++ + ++++ +++++QG+++ I+VS VRSS
Sbjct: 861 RKQVEKIKRAIDADKDFQDYMGIDNLKVGSVEEFQGQERKVIMVSTVRSSVKYISLDETF 920
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGS 1320
L + R NVA+TRAK LIMVG+
Sbjct: 921 NIGFLKNEKRFNVAVTRAKSLLIMVGN 947
Score = 144 (55.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 87/306 (28%), Positives = 133/306 (43%)
Query: 989 ASILLTSYTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEI- 1044
A IL + +NSA D L KL S+ +D +I R + QK + N N EE+
Sbjct: 579 AYILACAPSNSAADQLCEKLITSEHVDAHKIYRLYASSRN-QKDIPKILKDNCNVDEEMI 637
Query: 1045 ----KKRLDQVKVVAVTCLGITNPLLT----DKKFDVCIMDEAG---QTTLPVSLGPLMF 1093
K+ L K++ T L L+T + F +DEAG ++ +S+ L+
Sbjct: 638 DFPCKEDLMSYKILICT-LVTAGRLVTGGFSEDHFTHNFVDEAGHAVESETIISVAGLLN 696
Query: 1094 ASK--FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP-----------QAISALQ 1140
A K VL GD QL P+++S A +G+++SL RL ++ + +S L
Sbjct: 697 AEKGQLVLAGDPKQLGPILRSPLAINHGLDVSLLERLMTQNDLYKRGDVEFDNRYVSKLI 756
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIF 1198
YR I+E+ N L Y L +DEI++ + C W E L P + PVIF
Sbjct: 757 MNYRSHPYILEVPNRLFYDGELKACADEISSNQY-------CM-W--EHL-PSKGFPVIF 805
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG------KDIGIITPYNSQAN 1252
E+ N L+ + + L+ +G KDIGII PY Q
Sbjct: 806 HGVPGKDERESNSPSFFNIYEINILVDYLKKLLLTQPKKGISRIFPKDIGIIAPYRKQVE 865
Query: 1253 LIRHSL 1258
I+ ++
Sbjct: 866 KIKRAI 871
Score = 111 (44.1 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 85/329 (25%), Positives = 142/329 (43%)
Query: 794 RQHMPSPNLNASDGDSLIGAAIP--TKDMDCTLRSGDYVILSTESDRLAVASGLITEISR 851
R + S L+ L+G +P +++ LR GD+++L T+S+ + ++ +T+
Sbjct: 391 RYNKDSVTLHRDRDKRLMGLNLPGVSENRPSVLR-GDHLLL-TKSEEVTFSN--VTKYKG 446
Query: 852 FHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNXXXXXXXXXXXXX 911
+ V + ++L G + L +V+ IDK + F+V R
Sbjct: 447 YVHRVELDQ-VKL-GLSKR-----FLKDVY-IDKMKFRVEFTVNRIPVRLQHRAVHMAV- 497
Query: 912 XRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVL--TAKDYA-LILGM 968
+ + D+ P PAL + N Q A+ ++ T+K L+ G
Sbjct: 498 -QHNLKDVLFPMASRSLNPVSPPALRLFDRKLEYNFQQYSAVCNIVAGTSKPAPYLVFGP 556
Query: 969 PGTGKTSTMVHAVKALLMR--GASILLTSYTNSAVDNLLIKL-KSQSIDFVRIGRHEVVH 1025
PGTGKT T+V A+K + A IL + +NSA D L KL S+ +D +I R
Sbjct: 557 PGTGKTVTIVEAIKQVEKNIPDAYILACAPSNSAADQLCEKLITSEHVDAHKIYRLYASS 616
Query: 1026 KEIQKHCLSAM--NINSVEEI-----KKRLDQVKVVAVTCLGITNPLLT----DKKFDVC 1074
+ QK + N N EE+ K+ L K++ T L L+T + F
Sbjct: 617 RN-QKDIPKILKDNCNVDEEMIDFPCKEDLMSYKILICT-LVTAGRLVTGGFSEDHFTHN 674
Query: 1075 IMDEAG---QTTLPVSLGPLMFASKFVLV 1100
+DEAG ++ +S+ L+ A K LV
Sbjct: 675 FVDEAGHAVESETIISVAGLLNAEKGQLV 703
Score = 39 (18.8 bits), Expect = 8.4e-11, Sum P(3) = 8.4e-11
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 365 TSSCHFL-VLEVSEKNRPADPVDAKSPYKVLRL 396
T S H + +E +++ A + PYK LRL
Sbjct: 263 TRSFHIVRFIEAEYRSKLAALLGPTEPYKPLRL 295
>UNIPROTKB|F1NNW1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA] GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 OMA:VRFFKLD IPI:IPI00594294
EMBL:AADN02045008 Ensembl:ENSGALT00000002368 Uniprot:F1NNW1
Length = 735
Score = 141 (54.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 66/238 (27%), Positives = 110/238 (46%)
Query: 1123 SLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLS-------------CGSDE 1168
+L+ + E + PQ ++ L YR + I+++ N L Y L C +E
Sbjct: 474 ALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEE 533
Query: 1169 IANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIA 1225
+ N + + C +EA +P F NT +++ Y K Q+ C
Sbjct: 534 LPNRGVPIIFHGVCGEDEREAKSPS----FFNTAEIEVVVQYLQKLLQSQGR--RGC--- 584
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGR 1274
I K+IGII+PY Q IR +++ + +++ +++++QG+
Sbjct: 585 --------PTISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQ 636
Query: 1275 DKDCILVSFVRS-SENPRNCTSSLLG---DWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
++ IL+S VRS SE + + LG + R+NVALTRAK LI+VG+ LSK P
Sbjct: 637 ERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDP 694
Score = 128 (50.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 56/188 (29%), Positives = 90/188 (47%)
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL---------SEE--HPQAISALQSQYR 1144
+ VL GD QL P+++S A ++G+ SL RL S+E +PQ ++ L YR
Sbjct: 437 QLVLAGDPQQLGPVLRSPLAAQHGLGTSLLERLMLHNALYAKSDEGYNPQFVTKLLWNYR 496
Query: 1145 MCQGIMELSNALIYGDRLSC--GSD-EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT 1201
+ I+++ N L Y L GS+ ++ N C+ W +E N P+IF
Sbjct: 497 SHKAILKVPNELFYDSELKAYEGSEPDVRNFY--------CT-W-EELPNRGVPIIFHGV 546
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE-------IEGKDIGIITPYNSQANLI 1254
EAK N E ++ + Q+L++++ I K+IGII+PY Q I
Sbjct: 547 CGEDEREAKSPSFFNT-AEIEVVVQYLQKLLQSQGRRGCPTISPKEIGIISPYRKQVEKI 605
Query: 1255 RHSLSVSS 1262
R L+++S
Sbjct: 606 R--LAITS 611
Score = 101 (40.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 940 WSEKSL--NDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAVKAL--LMRGASIL 992
W ++ + N++Q +A+ ++T LI G PGTGKT T+V A+K + + A IL
Sbjct: 252 WFDRKVEANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARIL 311
Query: 993 LTSYTNSAVDNLLIKLKSQSID-FV-RIGRHEVVHKEIQKHCLSAMNINSVEEI-----K 1045
+ +NSA D L +L + ++ RI +K++ N + E+ K
Sbjct: 312 ACAPSNSAADLLCQRLLTNIAPRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSK 371
Query: 1046 KRLDQVKVVAVTCL--G-ITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
K L +++ T + G + + F +DE G P S+
Sbjct: 372 KLLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESV 417
>FB|FBgn0036451 [details] [associations]
symbol:CG9425 species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR003593
InterPro:IPR007087 InterPro:IPR011990 InterPro:IPR015880
Pfam:PF00642 PROSITE:PS00028 SMART:SM00355 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:1.25.40.10 GO:GO:0017111 eggNOG:COG1112
GeneTree:ENSGT00550000074391 RefSeq:NP_996084.1 UniGene:Dm.11708
ProteinModelPortal:Q7KUL0 SMR:Q7KUL0 STRING:Q7KUL0 PaxDb:Q7KUL0
PRIDE:Q7KUL0 EnsemblMetazoa:FBtr0075693 EnsemblMetazoa:FBtr0333074
EnsemblMetazoa:FBtr0333075 GeneID:39613 KEGG:dme:Dmel_CG9425
UCSC:CG9425-RB FlyBase:FBgn0036451 InParanoid:Q7KUL0 OMA:WINELSG
OrthoDB:EOG46HDRH PhylomeDB:Q7KUL0 ChiTaRS:CG9425 GenomeRNAi:39613
NextBio:814517 ArrayExpress:Q7KUL0 Bgee:Q7KUL0 Uniprot:Q7KUL0
Length = 2103
Score = 211 (79.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 103/381 (27%), Positives = 167/381 (43%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYAL----ILGMPGTGKTSTMVHAVKALLMRG-ASILLTSY 996
E LN QR A+ + TA L ++G GTGKT T+ A+K LL + A IL+ ++
Sbjct: 803 EPKLNAKQREAVNAITTALSIKLPPILLIGPFGTGKTYTLAQAIKQLLTQPEAKILICTH 862
Query: 997 TNSAVDNLLIK------LKS--QSIDFVRIGRHE----VVHKEIQKHCLSAMNINSVEEI 1044
+NSA D L IK ++ + +R+ H+ V+ +QK+C++ N +
Sbjct: 863 SNSAAD-LYIKEYLHPWIEEGLKEATPLRVYYHKRWSATVNGVVQKYCITDGVGNFLRPT 921
Query: 1045 KKRLDQVKVVAVTCLGITNPLLT---DKK-FDVCIMDEAGQTTLPVSLGPLMFAS---KF 1097
+ + + ++V VT L I+ L T K F +DEA Q ++ PL A+ +
Sbjct: 922 VEDIMRHRIVVVT-LSISMELATLGLPKGLFTHIFLDEAAQAMECEAIMPLALANDSTRI 980
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA---LQSQYRMCQGIMELSN 1154
VL GDH Q+ P + S A+E + ISL RL + +P L YR + I+ ++
Sbjct: 981 VLAGDHMQMSPELFSAFAKERKLHISLLERLYDHYPSNFPCKILLCENYRAHEAIIRFTS 1040
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT 1214
L Y +L +A+ K D P+ F T + K+
Sbjct: 1041 ELFYEQKL------VASGKQPRHDRFY-------------PLTFFTTRGEDVQD-KNSTA 1080
Query: 1215 LNNPVEACLIAKITQELVKN------EIEGKDIGIITPYNSQANLIRHSLS---VSSVEI 1265
N E + + EL K ++ IGI+TPY+ Q IR L + + +
Sbjct: 1081 FYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTPYSDQVFRIRSELRKRRMGGISV 1140
Query: 1266 HTIDKYQGRDKDCILVSFVRS 1286
+ QG+ + +S VR+
Sbjct: 1141 ERVLNVQGKQFRAVFLSTVRT 1161
Score = 39 (18.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 391 YKVLRLLNEQS 401
YKVL LL+EQ+
Sbjct: 76 YKVLTLLSEQT 86
>UNIPROTKB|Q5ZKD7 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4
CTD:4343 EMBL:AJ720147 IPI:IPI00594294 RefSeq:NP_001012861.1
UniGene:Gga.1182 ProteinModelPortal:Q5ZKD7 STRING:Q5ZKD7
PRIDE:Q5ZKD7 GeneID:419872 KEGG:gga:419872 InParanoid:Q5ZKD7
NextBio:20822865 Uniprot:Q5ZKD7
Length = 967
Score = 141 (54.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 66/238 (27%), Positives = 110/238 (46%)
Query: 1123 SLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLS-------------CGSDE 1168
+L+ + E + PQ ++ L YR + I+++ N L Y L C +E
Sbjct: 706 ALYAKSDEGYNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFYCTWEE 765
Query: 1169 IANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIA 1225
+ N + + C +EA +P F NT +++ Y K Q+ C
Sbjct: 766 LPNRGVPIIFHGVCGEDEREAKSPS----FFNTAEIEVVVQYLQKLLQSQGR--RGC--- 816
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGR 1274
I K+IGII+PY Q IR +++ + +++ +++++QG+
Sbjct: 817 --------PTISPKEIGIISPYRKQVEKIRLAITSKDPVLRALPDIGQLKVGSVEEFQGQ 868
Query: 1275 DKDCILVSFVRS-SENPRNCTSSLLG---DWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
++ IL+S VRS SE + + LG + R+NVALTRAK LI+VG+ LSK P
Sbjct: 869 ERRVILISTVRSCSEYLQLDQTFRLGFLKNPKRLNVALTRAKALLIVVGNAAVLSKDP 926
Score = 126 (49.4 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 59/202 (29%), Positives = 93/202 (46%)
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL---------SEE- 1131
TT+ P + VL GD QL P+ +S A ++G+ SL RL S+E
Sbjct: 657 TTMDPDTNPN--GGQLVLAGDPQQLGPVPRSPLAAQHGLGTSLLERLMLHNALYAKSDEG 714
Query: 1132 -HPQAISALQSQYRMCQGIMELSNALIYGDRLSC--GSD-EIANAKIKVSDLSSCSPWLK 1187
+PQ ++ L YR + I+++ N L Y L GS+ ++ N C+ W +
Sbjct: 715 YNPQFVTKLLWNYRSHKAILKVPNELFYDSELKAYEGSEPDVRNFY--------CT-W-E 764
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE-------IEGKD 1240
E N P+IF EAK N E ++ + Q+L++++ I K+
Sbjct: 765 ELPNRGVPIIFHGVCGEDEREAKSPSFFNT-AEIEVVVQYLQKLLQSQGRRGCPTISPKE 823
Query: 1241 IGIITPYNSQANLIRHSLSVSS 1262
IGII+PY Q IR L+++S
Sbjct: 824 IGIISPYRKQVEKIR--LAITS 843
Score = 101 (40.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 940 WSEKSL--NDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAVKAL--LMRGASIL 992
W ++ + N++Q +A+ ++T LI G PGTGKT T+V A+K + + A IL
Sbjct: 484 WFDRKVEANEEQCQAVKHIVTGMSRPAPYLIFGPPGTGKTVTLVEAIKQVWSCFKDARIL 543
Query: 993 LTSYTNSAVDNLLIKLKSQSID-FV-RIGRHEVVHKEIQKHCLSAMNINSVEEI-----K 1045
+ +NSA D L +L + ++ RI +K++ N + E+ K
Sbjct: 544 ACAPSNSAADLLCQRLLTNIAPRYIYRIMASSANYKDVPADVRPCCNWDDSEKCYVYPSK 603
Query: 1046 KRLDQVKVVAVTCL--G-ITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
K L +++ T + G + + F +DE G P S+
Sbjct: 604 KLLKPYRILITTLVTAGRLVSANFPPGYFSHVFIDECGHAVEPESV 649
Score = 38 (18.4 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 46 PQNPNSDLIHSVSSPNCPPFSVYRNPSDSAPSK 78
P N +DL+ N P +YR + SA K
Sbjct: 547 PSNSAADLLCQRLLTNIAPRYIYRIMASSANYK 579
>ASPGD|ASPL0000069352 [details] [associations]
symbol:AN7246 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] InterPro:IPR000641 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 PRINTS:PR00819 SMART:SM00382
GO:GO:0005524 EMBL:BN001304 eggNOG:COG0464 GO:GO:0017111
EMBL:AACD01000123 RefSeq:XP_680515.1 ProteinModelPortal:Q5AWT4
EnsemblFungi:CADANIAT00000198 GeneID:2870136 KEGG:ani:AN7246.2
HOGENOM:HOG000168598 OMA:LDNQFRL OrthoDB:EOG4CJZR5 Uniprot:Q5AWT4
Length = 2310
Score = 107 (42.7 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 55/223 (24%), Positives = 96/223 (43%)
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQS--- 1112
T I +L V +++EAG+ L L +K +++GDH QL P + +
Sbjct: 728 TAAAINASVLNTTSPGVVLLEEAGEILESHVLTALGSHTKQLIMIGDHQQLRPKINNYAL 787
Query: 1113 TEARENGMEI--SLFRRLSEE-HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+ + +G ++ SLF RL E +P S L Q+RM I L L Y D L D+
Sbjct: 788 SVEKGSGYDLNRSLFERLVESGYPH--STLAKQHRMAPEISALVRRLTYPDLLD--GDK- 842
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
++ L + ++ + +P F++ + + N E L+ KI +
Sbjct: 843 TKTRLAPRGLQNRVVFIDHS----QPEGFLH-GVSDRDGDGGKGSKQNTFEVKLVLKIVK 897
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEI-HTIDKY 1271
L + + I+TPY Q +L+R L + + + +D Y
Sbjct: 898 YLGQQGYGTDKLVILTPYLGQLHLLREELRKDTDPVLNDLDSY 940
Score = 101 (40.6 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 1250 QANLIRHSLSVS---SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
+A LI H+ + +++ TID YQG + D ++ + RS+++ + R+NV
Sbjct: 944 RAGLISHASAQHVKRPIKLSTIDNYQGEESDIVIATLTRSNKDG---DIGFMSAPQRLNV 1000
Query: 1307 ALTRAKKKLIMVGSCRTLS 1325
L+RA+ LIM+G+ T +
Sbjct: 1001 LLSRARDVLIMIGNSNTFT 1019
Score = 98 (39.6 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 36/99 (36%), Positives = 50/99 (50%)
Query: 928 SVFSQDPALSYIW-SEK--SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
S+ Q+ L I +EK SL+ Q +++ LT + +LI G PGTGK+ KAL
Sbjct: 442 SLGDQERTLQDILGTEKPLSLDPSQMESLLSGLTQR-VSLIQGPPGTGKSFVGALIAKAL 500
Query: 985 LMRGA-SILLTSYTNSAVDNLLIKLKSQSID---FVRIG 1019
+IL+ YTN A+D L L ID VR+G
Sbjct: 501 YKHSKETILVMCYTNHALDQFLEDLMDIGIDESAIVRLG 539
Score = 45 (20.9 bits), Expect = 2.9e-10, Sum P(4) = 2.9e-10
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 757 RGSGGNHFTGCLSSIVLDASNEH--QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAA 814
RGS + CL +V S + +K++ +N F+R H L G+ ++ A
Sbjct: 296 RGSPCSLVISCLGGLVQLTSRDRDARKAFLENE--QSFLR-HRSFGCLIR--GEEIVSFA 350
Query: 815 IPTKDMDCTLRSGDYVILSTESD 837
+ + +D L+S V+L D
Sbjct: 351 MVDRQIDYLLKSPPSVVLRVIGD 373
Score = 37 (18.1 bits), Expect = 0.00048, Sum P(4) = 0.00048
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 1291 RNCTSSLLGDWHRIN--VALTRAK---KKLI--MVGSC-RTLSKVPLLKLLINKV 1337
RNC++ W ++ + LT K K L+ M + R L++ PL++ +N+V
Sbjct: 1552 RNCSA-----WKKLQSMIGLTSVKATVKALLDSMQSNYERELNEKPLVEFTLNRV 1601
>MGI|MGI:97054 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISO] InterPro:IPR003593 SMART:SM00382
MGI:MGI:97054 GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391 CTD:4343
HOVERGEN:HBG052500 EMBL:X52574 EMBL:AK004542 EMBL:BC053743
EMBL:X75819 IPI:IPI00130328 PIR:A39611 RefSeq:NP_001156912.1
RefSeq:NP_001156913.1 RefSeq:NP_032645.2 UniGene:Mm.1597
ProteinModelPortal:P23249 SMR:P23249 DIP:DIP-48575N STRING:P23249
PhosphoSite:P23249 PaxDb:P23249 PRIDE:P23249
Ensembl:ENSMUST00000168015 GeneID:17454 KEGG:mmu:17454
NextBio:292100 Bgee:P23249 Genevestigator:P23249
GermOnline:ENSMUSG00000002227 Uniprot:P23249
Length = 1004
Score = 132 (51.5 bits), Expect = 0.00021, P = 0.00021
Identities = 74/283 (26%), Positives = 119/283 (42%)
Query: 1023 VVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV-----CIM 1076
+V ++I+ C A V KK L Q +V+ +T L IT L +F + +
Sbjct: 588 MVPEDIKTCCNWDAKKGEYVYPAKKHLQQYRVL-ITTL-ITASRLVSAQFPIDHFTHIFI 645
Query: 1077 DEAGQTTLP---VSLGPLMFASK-------FVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
DEAG P V++ LM + VL GD QL P+++S A ++G+ SL
Sbjct: 646 DEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSLLE 705
Query: 1127 RLSEEH-----------PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
RL + PQ I+ L YR I+++ N L Y L +D + +
Sbjct: 706 RLLAYNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQACADVVDRERF- 764
Query: 1176 VSDLSSCSPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELV- 1232
C W E L P + P+IF E + NP EA + ++L+
Sbjct: 765 ------CR-W--EGL-PQQGFPIIFHGVMGKDEREGNS-PSFFNPEEAATVTSYLKQLLA 813
Query: 1233 ------KNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTID 1269
K + +++G+I+PY Q IR+ ++ E+ +D
Sbjct: 814 PSSKKGKARLSPRNVGVISPYRKQVEKIRYCITKLDRELRGLD 856
Score = 127 (49.8 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGRDKDCILV 1281
K + +++G+I+PY Q IR+ ++ + +++ +++++QG+++ IL+
Sbjct: 820 KARLSPRNVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILI 879
Query: 1282 SFVRSSEN----PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S VRSS++ + L + R NVA+TRAK LI+VG+ L P K +
Sbjct: 880 STVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFC 939
Query: 1338 GEQSG 1342
E G
Sbjct: 940 KENGG 944
Score = 112 (44.5 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 52/165 (31%), Positives = 78/165 (47%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A I++ T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 495 DRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 554
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A V KK L
Sbjct: 555 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKTCCNWDAKKGEYVYPAKKHL 614
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
Q +V+ +T L IT L +F + +DEAG P SL
Sbjct: 615 QQYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHCMEPESL 657
>WB|WBGene00010989 [details] [associations]
symbol:R03D7.2 species:6239 "Caenorhabditis elegans"
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
GO:GO:0006974 EMBL:Z46828 PIR:T23869 RefSeq:NP_496354.1
ProteinModelPortal:Q09594 SMR:Q09594 EnsemblMetazoa:R03D7.2
GeneID:174682 KEGG:cel:CELE_R03D7.2 UCSC:R03D7.2 CTD:174682
WormBase:R03D7.2 eggNOG:KOG1801 GeneTree:ENSGT00530000065249
InParanoid:Q09594 NextBio:885046 Uniprot:Q09594
Length = 542
Score = 183 (69.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 78/265 (29%), Positives = 127/265 (47%)
Query: 1064 PLLTDK-KFDVCIMDEAGQTTLPV--SLGPLMFASKFVLVGDHYQLPPLVQSTEARE-NG 1119
P L K +FD+ +DEA Q L V SL ++ S+ +LVGD +QLPP ++ E
Sbjct: 208 PFLEIKDRFDITFIDEASQLALYVLGSLATMLPKSRMILVGDMHQLPPYMEEALPAELKR 267
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMC-QGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
I L+ + + S ++ C + I E+ L YG+ L+ ++K V+D
Sbjct: 268 AAIGEPLTLAVKGRRWPSMHLTRVHRCPKMITEVLGDLFYGNTLT-------SSKPGVTD 320
Query: 1179 LSSCSPWLKEALNPCR-PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN-EI 1236
+ P LK P R P++FVN K + +N EA ++ + L +
Sbjct: 321 I----PVLKAMGLPSRHPMVFVNYTSPQTAVGK---SFSNEGEARYALQLVEALTRYAST 373
Query: 1237 EGKDI--GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
K I I+ Y +Q + + +S++ V ++TID QG++ D +V RS R
Sbjct: 374 ANKKITAAILNFYGAQYSYV-YSMAEDEVTVNTIDGCQGQEYDVTIVLLTRSDPYER--- 429
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVG 1319
S L + +RINVAL+R K +++G
Sbjct: 430 SKFLVNANRINVALSRPKIATVIIG 454
Score = 46 (21.3 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 53 LIHSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNIL 95
L HS +S + NPSDS P N+ S N P N+L
Sbjct: 112 LPHSSNSEYEFAYDPSLNPSDSHPMGSNTV-SEPANVPFQNLL 153
>UNIPROTKB|Q9HCE1 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006355 GO:GO:0007219 GO:GO:0006351
GO:GO:0003723 GO:GO:0004386 GO:GO:0000932 GO:GO:0035279
eggNOG:COG1112 InterPro:IPR026122 PANTHER:PTHR10887:SF17
EMBL:AL603832 HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 CTD:4343
OMA:VRFFKLD EMBL:AB046851 EMBL:AK074174 EMBL:AL833353 EMBL:BC002548
EMBL:BC004499 EMBL:BC009312 IPI:IPI00444452 IPI:IPI00444454
IPI:IPI00929442 RefSeq:NP_001123551.1 RefSeq:NP_066014.1
UniGene:Hs.514941 ProteinModelPortal:Q9HCE1 SMR:Q9HCE1
DIP:DIP-44158N IntAct:Q9HCE1 STRING:Q9HCE1 PhosphoSite:Q9HCE1
DMDM:24638063 PaxDb:Q9HCE1 PRIDE:Q9HCE1 DNASU:4343
Ensembl:ENST00000357443 Ensembl:ENST00000369645
Ensembl:ENST00000413052 Ensembl:ENST00000544796 GeneID:4343
KEGG:hsa:4343 UCSC:uc001eck.3 GeneCards:GC01P113215 HGNC:HGNC:7200
MIM:610742 neXtProt:NX_Q9HCE1 PharmGKB:PA30908 HOVERGEN:HBG052500
InParanoid:Q9HCE1 PhylomeDB:Q9HCE1 ChiTaRS:MOV10 GenomeRNAi:4343
NextBio:17098 ArrayExpress:Q9HCE1 Bgee:Q9HCE1 CleanEx:HS_MOV10
Genevestigator:Q9HCE1 GermOnline:ENSG00000155363 Uniprot:Q9HCE1
Length = 1003
Score = 128 (50.1 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGRDKDCILV 1281
K + + +G+I+PY Q IR+ ++ + +++ +++++QG+++ IL+
Sbjct: 819 KARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILI 878
Query: 1282 SFVRSSEN----PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S VRSS++ + L + R NVA+TRAK LI+VG+ L P K+ +
Sbjct: 879 STVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIIVGNPLLLGHDPDWKVFLEFC 938
Query: 1338 GEQSG 1342
E G
Sbjct: 939 KENGG 943
Score = 109 (43.4 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 50/165 (30%), Positives = 79/165 (47%)
Query: 942 EKSL--NDDQRRAIIKVLTAKDYA---LILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A+ ++T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 494 DRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 553
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A V KK+L
Sbjct: 554 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKPCCNWDAKKGEYVFPAKKKL 613
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
+ +V+ +T L IT L +F + +DEAG P SL
Sbjct: 614 QEYRVL-ITTL-ITAGRLVSAQFPIDHFTHIFIDEAGHCMEPESL 656
>UNIPROTKB|Q0V8H6 [details] [associations]
symbol:MOV10 "Putative helicase MOV-10" species:9913 "Bos
taurus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] GO:GO:0005524 GO:GO:0003723 GO:GO:0004386
GO:GO:0000932 GO:GO:0035279 eggNOG:COG1112 InterPro:IPR026122
PANTHER:PTHR10887:SF17 GeneTree:ENSGT00550000074391
HOGENOM:HOG000239755 OrthoDB:EOG4SXNC4 EMBL:BT026242 EMBL:BC148151
IPI:IPI00691419 RefSeq:NP_001069307.1 UniGene:Bt.2939
ProteinModelPortal:Q0V8H6 STRING:Q0V8H6 Ensembl:ENSBTAT00000018997
GeneID:523206 KEGG:bta:523206 CTD:4343 InParanoid:Q0V8H6
OMA:VRFFKLD NextBio:20873687 Uniprot:Q0V8H6
Length = 1003
Score = 128 (50.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGRDKDCILV 1281
K + + +G+I+PY Q IR+ ++ + +++ +++++QG+++ IL+
Sbjct: 819 KARLSPRSVGVISPYRKQVEKIRYCITKLDKQLRGLDDIKDLKVGSVEEFQGQERSVILI 878
Query: 1282 SFVRSSEN----PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S VRSS++ + L + R NVA+TRAK LI+VG+ L P K+ +
Sbjct: 879 STVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKVFLEFC 938
Query: 1338 GEQSG 1342
E G
Sbjct: 939 KENGG 943
Score = 108 (43.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 51/165 (30%), Positives = 79/165 (47%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A I+ T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 494 DRSLESNPEQLQAMKHIVMGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 553
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C A + V KK+L
Sbjct: 554 APSNSGADLLCQRLRVHLPSSIYRLLAPSRDIHLVPEDIKPCCNWDAKKGDFVFPSKKKL 613
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
+ +V+ +T L IT L +F + +DEAG P SL
Sbjct: 614 QEYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHAMEPESL 656
>RGD|1598327 [details] [associations]
symbol:Mov10 "Moloney leukemia virus 10" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0035279 "mRNA cleavage involved in gene silencing
by miRNA" evidence=IEA;ISO] InterPro:IPR003593 SMART:SM00382
RGD:1598327 GO:GO:0005524 GO:GO:0017111 GO:GO:0000932 GO:GO:0035279
InterPro:IPR026122 PANTHER:PTHR10887:SF17
GeneTree:ENSGT00550000074391 EMBL:CH474015 OrthoDB:EOG4SXNC4
CTD:4343 IPI:IPI00192859 RefSeq:NP_001101181.1 UniGene:Rn.3508
Ensembl:ENSRNOT00000018061 GeneID:310756 KEGG:rno:310756
UCSC:RGD:1598327 NextBio:662562 Uniprot:D3ZUC2
Length = 1004
Score = 126 (49.4 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLS-----------VSSVEIHTIDKYQGRDKDCILV 1281
K + + +G+I+PY Q IR+ ++ + +++ +++++QG+++ IL+
Sbjct: 820 KARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEEFQGQERSVILI 879
Query: 1282 SFVRSSEN----PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S VRSS++ + L + R NVA+TRAK LI+VG+ L P K +
Sbjct: 880 STVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKALLIVVGNPLLLGHDPDWKTFLEFC 939
Query: 1338 GEQSG 1342
E G
Sbjct: 940 KENGG 944
Score = 107 (42.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 942 EKSL--NDDQRRA---IIKVLTAKDYALILGMPGTGKTSTMVHAVKALL--MRGASILLT 994
++SL N +Q +A I++ T +I G PGTGKT T+V A+K ++ + A IL
Sbjct: 495 DRSLESNPEQLQAMKHIVRGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAHILAC 554
Query: 995 SYTNSAVD----NLLIKLKSQSIDFVRIGRH-EVVHKEIQKHC-LSAMNINSVEEIKKRL 1048
+ +NS D L + L S + R +V ++I+ C V KK L
Sbjct: 555 TPSNSGADLLCQRLRVHLPSSIYRLLAPSRDIRMVPEDIKTCCNWDPKKGEYVYPAKKHL 614
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDV-----CIMDEAGQTTLPVSL 1088
Q +V+ +T L IT L +F + +DEAG P SL
Sbjct: 615 QQYRVL-ITTL-ITASRLVSAQFPIDHFTHIFIDEAGHCMEPESL 657
>WB|WBGene00001258 [details] [associations]
symbol:emb-4 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] InterPro:IPR024860 InterPro:IPR026300
PIRSF:PIRSF038901 GO:GO:0009792 GO:GO:0040010 GO:GO:0010171
GO:GO:0040011 GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112
HOGENOM:HOG000170551 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 GeneTree:ENSGT00700000104467 EMBL:AL132853
GeneID:180232 KEGG:cel:CELE_Y80D3A.2 CTD:180232
RefSeq:NP_001256831.1 ProteinModelPortal:Q9U1Q7 SMR:Q9U1Q7
PaxDb:Q9U1Q7 PRIDE:Q9U1Q7 EnsemblMetazoa:Y80D3A.2a.1
EnsemblMetazoa:Y80D3A.2a.2 UCSC:Y80D3A.2.1 WormBase:Y80D3A.2a
InParanoid:Q9U1Q7 NextBio:908508 ArrayExpress:Q9U1Q7 Uniprot:Q9U1Q7
Length = 1467
Score = 104 (41.7 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 29/93 (31%), Positives = 52/93 (55%)
Query: 1050 QVKVVAVTCLGIT---NPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFAS---------K 1096
+ K++A+TC N L+ ++D +M+EA Q + PL+ + +
Sbjct: 1033 EAKIIAMTCTHAALRRNELVKLGFRYDNIVMEEAAQILEVETFIPLLLQNPQDGHNRLKR 1092
Query: 1097 FVLVGDHYQLPPLVQSTEARE-NGMEISLFRRL 1128
++++GDH+QLPP+VQ+ ++ + ME SLF RL
Sbjct: 1093 WIMIGDHHQLPPVVQNQAFQKYSNMEQSLFARL 1125
Score = 103 (41.3 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 1241 IGIITPYNSQANLIR---------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+T YN QA LIR + L ++ T+DKYQG+ D I++S V++ R
Sbjct: 1226 ISILTTYNGQAQLIRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKT----R 1281
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVG 1319
N + D R+ VAL+RA+ L ++G
Sbjct: 1282 NIGH--IRDVRRLVVALSRARLGLYVLG 1307
Score = 80 (33.2 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
+++G PGTGKT V + + + L+ +++N A++ L K+ + +D +R+
Sbjct: 824 MVVGPPGTGKTDVAVQIISNIYHNWPNQRTLIVTHSNQALNQLFEKIIALDVDERHLLRM 883
Query: 1019 GR-HEVVHKEIQKHCLSAMN---------INSVEEIKKRLDQVKVVAVTC 1058
G E + E +N +N VE++ K L V VA TC
Sbjct: 884 GHGEEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDVAYTC 933
>WB|WBGene00019529 [details] [associations]
symbol:K08D10.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] eggNOG:COG1112
EMBL:FO081596 GeneTree:ENSGT00530000065249 PIR:T29386
RefSeq:NP_500503.1 UniGene:Cel.27256 ProteinModelPortal:Q21321
SMR:Q21321 PaxDb:Q21321 EnsemblMetazoa:K08D10.5 GeneID:187150
KEGG:cel:CELE_K08D10.5 UCSC:K08D10.5 CTD:187150 WormBase:K08D10.5
InParanoid:Q21321 OMA:KEINIFR NextBio:934280 Uniprot:Q21321
Length = 602
Score = 174 (66.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 74/290 (25%), Positives = 124/290 (42%)
Query: 1051 VKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPV--SLGPLMFASKFVLVGDHYQL 1106
+ A L P L + K FD+ +DEA Q L V SL L+ ++ +LVGD +QL
Sbjct: 293 IGTAAAIQLAFNQPDLAEIKDLFDITFIDEASQLALYVLGSLATLLPKTRIILVGDMHQL 352
Query: 1107 PPLVQSTEAREN-----GMEISLF---RRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
PP + E G ++L RR S H L +R + I +L A+ Y
Sbjct: 353 PPYTEDALPAELKRAAVGEPLTLAVKGRRWSSMH------LTRVHRCPKMITDLLGAVFY 406
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
G+ L+ S A ++ + + L P +FVN K N
Sbjct: 407 GNTLT--STRKAVNRVPILEAME--------LPSHHPFVFVNYISQQTQVGKSFSNENEA 456
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
A + + + + + ++ Y +Q + + +S++ V ++TID QG++ D
Sbjct: 457 RYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYV-YSIAEDGVRVNTIDGCQGQEYDV 515
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
+V RS + S L + +RINVAL+R+K +++G + P
Sbjct: 516 SIVLLTRSDPYEK---SKFLVNPNRINVALSRSKMATVVIGQRHLIGNHP 562
Score = 43 (20.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMP-GTGKTSTMV 978
+ + +L+++Q + I V K L L GTGKT+T +
Sbjct: 125 FGDLTLSEEQSQFIRTVKRLKFDCLALDCAFGTGKTTTAI 164
>SGD|S000000978 [details] [associations]
symbol:ECM32 "DNA dependent ATPase/DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0006449 "regulation of translational
termination" evidence=IMP] [GO:0005844 "polysome" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] SGD:S000000978 GO:GO:0005524 GO:GO:0005737
GO:GO:0003677 GO:GO:0003723 EMBL:BK006939 GO:GO:0005844
eggNOG:COG1112 GeneTree:ENSGT00700000104467 InterPro:IPR014001
SMART:SM00487 GO:GO:0003678 EMBL:U18922 GO:GO:0003724 PIR:S30862
RefSeq:NP_011103.1 ProteinModelPortal:P32644 SMR:P32644
DIP:DIP-5404N IntAct:P32644 MINT:MINT-499764 STRING:P32644
PaxDb:P32644 PeptideAtlas:P32644 EnsemblFungi:YER176W GeneID:856923
KEGG:sce:YER176W CYGD:YER176w HOGENOM:HOG000094475 OMA:KDTPRGT
OrthoDB:EOG4P8JS8 NextBio:983389 Genevestigator:P32644
GermOnline:YER176W GO:GO:0006449 Uniprot:P32644
Length = 1121
Score = 134 (52.2 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 80/304 (26%), Positives = 129/304 (42%)
Query: 1046 KRLDQVKVVAVTCLGITN-PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--KFVLVGD 1102
K + Q +++ T + L K+ V IMDEA Q++ +L PL FV VGD
Sbjct: 788 KVVSQSQIIFTTNIAAGGRELKVIKECPVVIMDEATQSSEASTLVPLSLPGIRNFVFVGD 847
Query: 1103 HYQLPPLVQSTEARENGMEISLFRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
QL S+ + +E SLF R LS + L +QYRM I E IY
Sbjct: 848 EKQL-----SSFSNIPQLETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYNGE 902
Query: 1162 LSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ------TL 1215
L G V+D P ++ P+ F D+ P + Q T
Sbjct: 903 LKDG----------VTDEQKAWPGVQH------PLFFYQCDLGPESRVRSTQRDIVGFTY 946
Query: 1216 NNPVEACLIAKITQELVKNE-IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGR 1274
N E I KI Q L+ ++ + ++IG+ITPY++Q +L+ L+ +V I+ +
Sbjct: 947 ENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLSDILT-KNVVINPKQISMQQ 1005
Query: 1275 DKDCILVSFVRSSENP----RNCTSSLLGDWHRINVALTRAKKKLIMVGSC---RTLSKV 1327
+ D I + S+ +N +++ H V + +K ++ SC T +K+
Sbjct: 1006 EYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTENKI 1065
Query: 1328 PLLK 1331
L+
Sbjct: 1066 GFLR 1069
Score = 124 (48.7 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 35/85 (41%), Positives = 48/85 (56%)
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
++ + + T+D +QG +K I+ S VR+ N N L D R+NVALTRAK LI+VG
Sbjct: 1033 INGLHVATVDSFQGHEKSFIIFSCVRN--NTEN-KIGFLRDKRRLNVALTRAKHGLIVVG 1089
Query: 1320 SCRTLSKV-PLLKLLINKVGEQSGI 1343
+ L K PL K I + EQ I
Sbjct: 1090 NKNVLRKGDPLWKDYITYLEEQEVI 1114
Score = 97 (39.2 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR--GASILLTSYT 997
+S LN Q+ A+ VL ++ G PGTGKTST+ + ++ R IL + +
Sbjct: 644 FSSDKLNRSQKTAVEHVLN-NSITILQGPPGTGKTSTIEEIIIQVIERFHAFPILCVAAS 702
Query: 998 NSAVDNLLIKLKSQ--SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD-QVKVV 1054
N A+DN+ K+ I +RI + + H L + ++++ + K L ++VV
Sbjct: 703 NIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNI--VYKNLSPDMQVV 760
Query: 1055 A 1055
A
Sbjct: 761 A 761
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 178 SKQPSPSPKAINRSLTTGRKR 198
S++PS SP S+T R R
Sbjct: 397 SREPSISPNENTTSITKSRNR 417
Score = 42 (19.8 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 34/154 (22%), Positives = 57/154 (37%)
Query: 3 QRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNC 62
+ +K N +++SQP P DR NS + +N + D H + P
Sbjct: 272 KERKTNIRNNVRNSQPIPE--------DRKNTNSHVTTNSGGKGKNESVDK-HQLPQPKA 322
Query: 63 --PPFSVYRNPSDSAPSKKN-SPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPE 119
S N + KK+ + Q N N P + + NS + K+ P
Sbjct: 323 LNGNGSGSTNTTGLKKGKKDHAGQKTKGNDKTGNKNPREAKLNSAGRKNALGKKSNNQPN 382
Query: 120 MLIKLSQYDGGDEVTWN----ISPVNERLLAVSK 149
S++ G + + ISP NE +++K
Sbjct: 383 K--GTSRWTIGSDTESSREPSISP-NENTTSITK 413
>FB|FBgn0051368 [details] [associations]
symbol:CG31368 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA;IC]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 EMBL:AE014297 GO:GO:0016787
GO:GO:0071011 GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 RefSeq:NP_996198.2 UniGene:Dm.10009
ProteinModelPortal:Q7KSN8 SMR:Q7KSN8 PaxDb:Q7KSN8
EnsemblMetazoa:FBtr0301042 GeneID:41437 KEGG:dme:Dmel_CG31368
UCSC:CG31368-RB FlyBase:FBgn0051368 InParanoid:Q7KSN8
OrthoDB:EOG43XSJ9 PhylomeDB:Q7KSN8 GenomeRNAi:41437 NextBio:823855
ArrayExpress:Q7KSN8 Bgee:Q7KSN8 Uniprot:Q7KSN8
Length = 1486
Score = 98 (39.6 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 28/93 (30%), Positives = 55/93 (59%)
Query: 1050 QVKVVAVTCL--GITNPLLTDK--KFDVCIMDEAGQ-----TTLPVSL-GPLMFASK--- 1096
+ K++A+TC + L + ++D +M+E+ Q T +P+ L PL ++
Sbjct: 1047 EAKIIAMTCTHAALKRKELVNLGFRYDNILMEESAQILEIETFIPLLLQNPLDGLNRLKR 1106
Query: 1097 FVLVGDHYQLPPLVQSTEARE-NGMEISLFRRL 1128
++++GDH+QLPP++++ ++ + ME SLF RL
Sbjct: 1107 WIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRL 1139
Score = 97 (39.2 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 31/88 (35%), Positives = 45/88 (51%)
Query: 1241 IGIITPYNSQANLIRHSLSVSSV---------EIHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+T YN Q +LIR ++ +I T+DKYQG+ D IL+S VR+
Sbjct: 1240 ISILTTYNGQKHLIRDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTK---- 1295
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVG 1319
L D R+ VA++RA+ L + G
Sbjct: 1296 --AVGHLRDVRRLVVAMSRARLGLYVFG 1321
Score = 83 (34.3 bits), Expect = 2.1e-08, Sum P(3) = 2.1e-08
Identities = 27/96 (28%), Positives = 47/96 (48%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
L++G PGTGKT V + + + L+ +++N A++ L K+ + ID +R+
Sbjct: 833 LVVGPPGTGKTDVAVQIISNIYHNHPNQRTLIVTHSNQALNQLFEKIMALDIDERHLLRL 892
Query: 1019 GRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVV 1054
G E E +K +N V + KR+D + V
Sbjct: 893 GHGEEA-LETEKDYSRYGRVNYV--LAKRMDLLSQV 925
Score = 40 (19.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 1031 HCLSAMNINSVEEIKKRL 1048
HC ++M I E KRL
Sbjct: 170 HCFNSMEIELCREQAKRL 187
>WB|WBGene00014208 [details] [associations]
symbol:ZK1067.2 species:6239 "Caenorhabditis elegans"
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] GeneTree:ENSGT00700000104467
EMBL:Z70038 RefSeq:NP_001254204.1 EnsemblMetazoa:ZK1067.2b
GeneID:174463 KEGG:cel:CELE_ZK1067.2 CTD:174463 WormBase:ZK1067.2b
OMA:THIGVQI Uniprot:E9P860
Length = 2443
Score = 162 (62.1 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 79/308 (25%), Positives = 136/308 (44%)
Query: 1026 KEIQKHCLSAMNI-NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
+E ++ C + N N V+ R+ + T P L + I++EA + L
Sbjct: 1415 REYREACENFKNAQNRVDAEIMRMTMIIGATTTGCSRLRPTLEKVGPRILIVEEAAEV-L 1473
Query: 1085 PVSLGPLMFAS--KFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAISALQS 1141
+ M ++ V++GDH QL P E G+ IS+F RL E S L+
Sbjct: 1474 EAHIISAMISTVEHVVMIGDHKQLRPNPAVHELGVAYGLRISMFERLVERG-LPFSQLRQ 1532
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT 1201
Q+RM I + L + D ++ + N + D+ + L + +T
Sbjct: 1533 QHRMNLTISDKIVKLSFYDNVT----DAENVGL-YPDVQGMATNL---------FFWSHT 1578
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI-RHSLSV 1260
M E+ D + N E + + + L+K DI ++ Y++Q NL+ R +V
Sbjct: 1579 SM---EESPDEVSWLNKHEISMTVALVKHLLKQNYTTNDIVVLATYSAQKNLMYREYANV 1635
Query: 1261 ------SSV-EIHTIDKYQGRDKDCILVSFVRSSENPRNCTS-SLLGDWHRINVALTRAK 1312
S+V + T+D +QG+++ ++VS VRS R T L +RI VALTRA+
Sbjct: 1636 FGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHRGGRENTGIGFLAVANRICVALTRAQ 1695
Query: 1313 KKLIMVGS 1320
+ ++G+
Sbjct: 1696 HGMYIIGN 1703
Score = 90 (36.7 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA------SILLTSYTN 998
+++ QR A + +LI G PGTGKT V VK +L + IL+ +TN
Sbjct: 1040 MDESQRLAFCNTFKY-ELSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTN 1098
Query: 999 SAVDNLLIKL 1008
S +DNLL ++
Sbjct: 1099 SGLDNLLERI 1108
Score = 48 (22.0 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALIL 966
I S KS+ D +AII+ L KD+ L L
Sbjct: 404 ISSRKSIVRDHSKAIIRGLFEKDFLLKL 431
Score = 41 (19.5 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
T +P + +E+ ++ + L ERYL H S +++ Q + Q S+ L+
Sbjct: 891 TSYLPCYKHVLENLKRISSFKPLPFERYLVH-GSKIIFRPNFQQAEKSEYQISEEKKLMK 949
Query: 680 RRNEFANDIIKASTTQQLP 698
NE + A T+ P
Sbjct: 950 TYNELRSLAACARYTKGKP 968
Score = 38 (18.4 bits), Expect = 2.4e-08, Sum P(4) = 2.4e-08
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 331 YLSKSQDKNGAGMLLEANSVVNGVP 355
++ S+D + A + E +V GVP
Sbjct: 339 HILSSEDVHAARNVCETKILVRGVP 363
>UNIPROTKB|F1MKC7 [details] [associations]
symbol:Bt.110099 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR011990 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0008270 GO:GO:0003676 Gene3D:1.25.40.10 OMA:YRVALLY
GeneTree:ENSGT00550000074391 EMBL:DAAA02049790 EMBL:DAAA02049791
EMBL:DAAA02049792 EMBL:DAAA02049793 EMBL:DAAA02049794
EMBL:DAAA02049795 EMBL:DAAA02049796 EMBL:DAAA02049797
EMBL:DAAA02049798 EMBL:DAAA02049799 IPI:IPI00698970
Ensembl:ENSBTAT00000006233 Uniprot:F1MKC7
Length = 1941
Score = 179 (68.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 90/362 (24%), Positives = 154/362 (42%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
+ +T Y + AV +LK Q + F R + VH + ++CL + + +S ++ ++ D
Sbjct: 710 VFITVYRHPAVQPSSPELKMQRVYF-RNRWVKTVHPVVHQYCLIS-SAHSTFQMPQKEDI 767
Query: 1051 VK--VVAVTCLGITNPL----LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKF---VLVG 1101
+K VV VT L + L L F ++DEA Q ++ PL A++ VL G
Sbjct: 768 LKHRVVVVT-LNTSQYLCQLDLEPGFFTHILLDEAAQAMECETIMPLALATRHTRVVLAG 826
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA---LQSQYRMCQGIMELSNALIY 1158
DH QL P V S ARE + +SL RL E +P L YR + I+ ++ L Y
Sbjct: 827 DHMQLSPFVYSEFARERNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFY 886
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
+L + A+ + L+ + ++ + N ++ E + P
Sbjct: 887 EGKLMASGKQPAHKEFY--PLTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWP 944
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSSVEIHTIDKYQGRD 1275
V +++ IG++TPY Q IR L +S V + + QG+
Sbjct: 945 V------------AWGKLDDGSIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQ 992
Query: 1276 KDCILVSFVRS------SENP--------RNCTSSL----LGDWHRINVALTRAKKKLIM 1317
+ +S VR+ + P + T L L ++ +N A+TRA+ + +
Sbjct: 993 FRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLSNYKLLNTAITRAQSLVAV 1052
Query: 1318 VG 1319
VG
Sbjct: 1053 VG 1054
Score = 38 (18.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 831 ILSTESDRLAVASGLIT 847
+L ES RLAV + +++
Sbjct: 688 VLEEESQRLAVVTSILS 704
>UNIPROTKB|F1NPB8 [details] [associations]
symbol:AQR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:AADN02003289 EMBL:AADN02003288
IPI:IPI00597734 Ensembl:ENSGALT00000015995 Uniprot:F1NPB8
Length = 1416
Score = 94 (38.1 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 1050 QVKVVAVTCL--GITNPLLTDK--KFDVCIMDEAGQ-----TTLPVSL-GPLM-FA--SK 1096
+ K++A+TC + L + K+D +M+E+ Q T +P+ L P F+ +
Sbjct: 1040 EAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPLLLQNPQDGFSRLKR 1099
Query: 1097 FVLVGDHYQLPPLVQSTEARE-NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
++++GDH+QLPP++++ ++ + ME SLF R + L +Q R + L N
Sbjct: 1100 WIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVD-LDAQGRARASLCNLYN 1157
Score = 85 (35.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 1241 IGIITPYNSQANLIR---------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+T YN Q +LIR + L ++ T+D++QG+ D IL+S VR+
Sbjct: 1233 ISILTTYNGQKHLIRDVINQRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTK---- 1288
Query: 1292 NCTSSLLGDWHRINVALTRAK 1312
L D R+ VA++RA+
Sbjct: 1289 -AVGHLRRDVRRLVVAMSRAR 1308
Score = 79 (32.9 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
+++G PGTGKT V + L L+ +++N A++ L K+ + ID +R+
Sbjct: 829 MVVGPPGTGKTDVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRL 888
Query: 1019 GRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVV 1054
G H E +K +N V + +RL+ ++ V
Sbjct: 889 G-HGEEELETEKDFSRYGRVNYV--LARRLELLREV 921
>ZFIN|ZDB-GENE-040426-1189 [details] [associations]
symbol:aqr "aquarius homolog (mouse)" species:7955
"Danio rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0097157 "pre-mRNA intronic binding" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 ZFIN:ZDB-GENE-040426-1189
GO:GO:0005681 GO:GO:0000398 CTD:9716 HOGENOM:HOG000170551
HOVERGEN:HBG080430 KO:K12874 GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:BC160661 IPI:IPI00861759 RefSeq:NP_956758.2 UniGene:Dr.17308
ProteinModelPortal:B1H1M2 DNASU:393436 GeneID:393436
KEGG:dre:393436 eggNOG:NOG272077 NextBio:20814473
ArrayExpress:B1H1M2 Uniprot:B1H1M2
Length = 1525
Score = 95 (38.5 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 28/92 (30%), Positives = 52/92 (56%)
Query: 1050 QVKVVAVTCL--GITNPLLTDK--KFDVCIMDEAGQ-----TTLPVSL-GP---LMFASK 1096
+ K++A+TC + L + K+D +M+EA Q T +P+ L P +
Sbjct: 1030 EAKIIAMTCTHAALKRHDLVELGFKYDNILMEEAAQILEIETFIPLLLQNPEDGYSRLKR 1089
Query: 1097 FVLVGDHYQLPPLVQSTEARE-NGMEISLFRR 1127
++++GDH+QLPP++++ ++ + ME SLF R
Sbjct: 1090 WIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTR 1121
Score = 86 (35.3 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 1241 IGIITPYNSQANLIR---HSLSVSSV------EIHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+T YN Q +LIR H S+ ++ T+D++QG+ D I++S VR+
Sbjct: 1223 ISILTTYNGQKHLIRDVIHQRCASNSFFGQPSKVTTVDRFQGQQNDYIILSLVRTK---- 1278
Query: 1292 NCTSSLLGDWHRINVALTRAK 1312
L D R+ VA++RA+
Sbjct: 1279 --AVGHLRDVRRLVVAMSRAR 1297
Score = 84 (34.6 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 27/97 (27%), Positives = 49/97 (50%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
+++G PGTGKT+ V + L L+ +++N A++ L K+ + ID +R+
Sbjct: 819 MVVGPPGTGKTNVAVQIISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRL 878
Query: 1019 GRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVA 1055
G H E +K +N V + +RL+ ++ VA
Sbjct: 879 G-HGEEELETEKDFSRYGRVNYV--LSRRLELLQEVA 912
Score = 37 (18.1 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEI 609
V + + ++ VT + WAP K D+ I ++ E +NEI
Sbjct: 8 VKTSAPSVSQINAEFVTQLSNKYWAPHVKNKLPFDSKI-IE-EVYQNEI 54
>UNIPROTKB|F1RSM3 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:CU466377 EMBL:CU639426 EMBL:CU929837 RefSeq:XP_003131321.1
UniGene:Ssc.13421 Ensembl:ENSSSCT00000018802 GeneID:100524104
KEGG:ssc:100524104 Uniprot:F1RSM3
Length = 1944
Score = 164 (62.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 82/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 735 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 792
Query: 1076 MDEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+K VL GDH QL P V S ARE + +SL RL E +
Sbjct: 793 LDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 852
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 853 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 910
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 911 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 958
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 959 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1018
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1049
Score = 43 (20.2 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
T V+AV L + ++ T T V I+ K++ F+RI R
Sbjct: 529 TKVNAVYLLPVPKEKLVQTQGTKEKVYEATIEEKTKEYIFLRISR 573
>UNIPROTKB|Q8EA89 [details] [associations]
symbol:SO_4019 "P-loop containing nucleoside triphosphate
hydrolase superfamily" species:211586 "Shewanella oneidensis MR-1"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001261 PROSITE:PS00758 GO:GO:0006508
GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
RefSeq:NP_719549.1 ProteinModelPortal:Q8EA89 GeneID:1171647
KEGG:son:SO_4019 PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 105 (42.0 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 61/263 (23%), Positives = 119/263 (45%)
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ + FD+ I+DEA Q + L L A ++VGD QL + A++ ++ L
Sbjct: 519 MEQQMFDLVIIDEATQANIAACLPALQRAKAALVVGDSKQLRHFSFLSRAKQTQIQTQL- 577
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK--IKVSDLSSCS 1183
L+ + L S YR + +S +L ++ ++ + I+ S+
Sbjct: 578 -GLAPD----CRGLMS-YRDASMLDLVSQSLASQSQVVFLNEHFRSKPELIQFSNQQFYQ 631
Query: 1184 PWLKEALN-PCRPVIFVNTDMLPAYEAKDHQTLNNPVEA-CLIAKITQEL--VKNEIEGK 1239
LK + PC ++ + ++D + +N +EA LI K++Q + +N +
Sbjct: 632 GMLKIMQHRPCTSSGHLHRVHVTG--SRDSKGIN-AIEAEALIQKLSQLIDEQENALVPS 688
Query: 1240 DIGIITPYNSQANLIRHSL----SVSSVEIHTID-----KYQGRDKDCILVSFVRSSENP 1290
IG+++ + +QA + + S +E H + +QG ++D +L+SF ++ +
Sbjct: 689 SIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFGFQGEERDIMLLSFSITANDS 748
Query: 1291 RNCTSSLLGDWHRINVALTRAKK 1313
R + L NVA+TRAK+
Sbjct: 749 R--AAVYLNREDMFNVAITRAKQ 769
Score = 96 (38.9 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 951 RAIIKVL-TAKDYAL--ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
RA I+ L A ++ L I G PGTGK+ T+ ++RG S+L+ ++T+ AVD + K
Sbjct: 261 RAQIQALKVAANHTLGQISGPPGTGKSYTIATVAAEQVLRGKSVLIVAHTDVAVDVIADK 320
Query: 1008 LKSQ 1011
L+ Q
Sbjct: 321 LQQQ 324
Score = 47 (21.6 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 10/45 (22%), Positives = 26/45 (57%)
Query: 822 CTLRSGDYVILSTE---SDRLAVASGLITEISRFHVSVSFSKPLR 863
C R G +++ ++ ++R + G++ E+ + +++FS PL+
Sbjct: 187 CRKR-GQFMVSRSQIILAERSIASRGILHELDKLSTALAFSAPLQ 230
>TIGR_CMR|SO_4019 [details] [associations]
symbol:SO_4019 "hypothetical protein" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001261
PROSITE:PS00758 GO:GO:0006508 GO:GO:0008237 EMBL:AE014299
GenomeReviews:AE014299_GR RefSeq:NP_719549.1
ProteinModelPortal:Q8EA89 GeneID:1171647 KEGG:son:SO_4019
PATRIC:23527708 HOGENOM:HOG000221837 OMA:HRPCTSS
ProtClustDB:CLSK907456 Uniprot:Q8EA89
Length = 907
Score = 105 (42.0 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 61/263 (23%), Positives = 119/263 (45%)
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ + FD+ I+DEA Q + L L A ++VGD QL + A++ ++ L
Sbjct: 519 MEQQMFDLVIIDEATQANIAACLPALQRAKAALVVGDSKQLRHFSFLSRAKQTQIQTQL- 577
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK--IKVSDLSSCS 1183
L+ + L S YR + +S +L ++ ++ + I+ S+
Sbjct: 578 -GLAPD----CRGLMS-YRDASMLDLVSQSLASQSQVVFLNEHFRSKPELIQFSNQQFYQ 631
Query: 1184 PWLKEALN-PCRPVIFVNTDMLPAYEAKDHQTLNNPVEA-CLIAKITQEL--VKNEIEGK 1239
LK + PC ++ + ++D + +N +EA LI K++Q + +N +
Sbjct: 632 GMLKIMQHRPCTSSGHLHRVHVTG--SRDSKGIN-AIEAEALIQKLSQLIDEQENALVPS 688
Query: 1240 DIGIITPYNSQANLIRHSL----SVSSVEIHTID-----KYQGRDKDCILVSFVRSSENP 1290
IG+++ + +QA + + S +E H + +QG ++D +L+SF ++ +
Sbjct: 689 SIGVLSCFRNQAEYLSQQILARFSAQQLERHQLRIATPFGFQGEERDIMLLSFSITANDS 748
Query: 1291 RNCTSSLLGDWHRINVALTRAKK 1313
R + L NVA+TRAK+
Sbjct: 749 R--AAVYLNREDMFNVAITRAKQ 769
Score = 96 (38.9 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Query: 951 RAIIKVL-TAKDYAL--ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
RA I+ L A ++ L I G PGTGK+ T+ ++RG S+L+ ++T+ AVD + K
Sbjct: 261 RAQIQALKVAANHTLGQISGPPGTGKSYTIATVAAEQVLRGKSVLIVAHTDVAVDVIADK 320
Query: 1008 LKSQ 1011
L+ Q
Sbjct: 321 LQQQ 324
Score = 47 (21.6 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
Identities = 10/45 (22%), Positives = 26/45 (57%)
Query: 822 CTLRSGDYVILSTE---SDRLAVASGLITEISRFHVSVSFSKPLR 863
C R G +++ ++ ++R + G++ E+ + +++FS PL+
Sbjct: 187 CRKR-GQFMVSRSQIILAERSIASRGILHELDKLSTALAFSAPLQ 230
>UNIPROTKB|P42694 [details] [associations]
symbol:HELZ "Probable helicase with zinc finger domain"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 HOVERGEN:HBG031603
OrthoDB:EOG4NP72K EMBL:D29677 EMBL:AC005544 EMBL:AC007448
IPI:IPI00000897 UniGene:Hs.370140 UniGene:Hs.569824
ProteinModelPortal:P42694 SMR:P42694 IntAct:P42694 STRING:P42694
PhosphoSite:P42694 DMDM:221222452 PaxDb:P42694 PRIDE:P42694
Ensembl:ENST00000358691 UCSC:uc002jfx.4 GeneCards:GC17M065066
HGNC:HGNC:16878 HPA:HPA028276 MIM:606699 neXtProt:NX_P42694
InParanoid:P42694 OMA:YRVALLY ChiTaRS:HELZ ArrayExpress:P42694
Bgee:P42694 CleanEx:HS_HELZ Genevestigator:P42694
GermOnline:ENSG00000198265 Uniprot:P42694
Length = 1942
Score = 161 (61.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 81/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 735 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 792
Query: 1076 MDEAGQTTLPVSLGPLMFAS---KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+ + VL GDH QL P V S ARE + +SL RL E +
Sbjct: 793 LDEAAQAMECETIMPLALATQNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 852
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 853 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 910
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 911 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 958
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 959 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1018
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1049
Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + ++ T T V I+ K++ F+R+ R ++ C
Sbjct: 529 TKVNAVYLLPVPKQKLVQTQGTKEKVYEATIEEKTKEYIFLRLSRECCEELNLRPDC 585
>MGI|MGI:1925705 [details] [associations]
symbol:Helz "helicase with zinc finger domain" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 MGI:MGI:1925705
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 GO:GO:0004386 eggNOG:COG1112 CTD:9931
HOGENOM:HOG000231202 HOVERGEN:HBG031603 EMBL:AB093209 EMBL:AL645947
EMBL:BC021818 EMBL:BC076626 EMBL:BC130582 EMBL:AK033094
IPI:IPI00453654 IPI:IPI00649664 IPI:IPI00915056 RefSeq:NP_938040.1
UniGene:Mm.272047 UniGene:Mm.394603 UniGene:Mm.490425
ProteinModelPortal:Q6DFV5 SMR:Q6DFV5 IntAct:Q6DFV5 STRING:Q6DFV5
PhosphoSite:Q6DFV5 PaxDb:Q6DFV5 PRIDE:Q6DFV5
Ensembl:ENSMUST00000075012 Ensembl:ENSMUST00000106746 GeneID:78455
KEGG:mmu:78455 UCSC:uc007mav.1 GeneTree:ENSGT00550000074391
InParanoid:Q8BZZ6 NextBio:348914 Bgee:Q6DFV5 Genevestigator:Q6DFV5
Uniprot:Q6DFV5
Length = 1964
Score = 163 (62.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 82/331 (24%), Positives = 138/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + S ++ ++ D +K VV VT L + L L F +
Sbjct: 735 KTVHPVVHQYCLIS-STQSTFQMPQKEDILKHRVVVVT-LSTSQYLCQLDLEPGFFTHVL 792
Query: 1076 MDEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+K VL GDH QL P V S ARE + +SL RL E +
Sbjct: 793 LDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 852
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 853 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 910
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 911 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 958
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 959 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1018
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1049
Score = 40 (19.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 14/57 (24%), Positives = 25/57 (43%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
T V+AV L + ++ + T V I+ K++ F+RI R ++ C
Sbjct: 529 TRVNAVYLLPVPKEKLVQSQGTKEKVYEATIEEKTKDYVFLRISRECCEELSLRPDC 585
>DICTYBASE|DDB_G0274797 [details] [associations]
symbol:aqr "intron-binding protein aquarius homolog"
species:44689 "Dictyostelium discoideum" [GO:0097157 "pre-mRNA
intronic binding" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR024860 dictyBase:DDB_G0274797
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000012
GO:GO:0000398 eggNOG:COG1112 KO:K12874 OMA:RTKAVGH GO:GO:0097157
PANTHER:PTHR10887:SF5 RefSeq:XP_643918.1 ProteinModelPortal:Q555Z2
PRIDE:Q555Z2 EnsemblProtists:DDB0233439 GeneID:8619345
KEGG:ddi:DDB_G0274797 InParanoid:Q555Z2 ProtClustDB:CLSZ2431000
Uniprot:Q555Z2
Length = 1487
Score = 95 (38.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 1220 EACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS-------------VEIH 1266
EA I + Q L+ + I ++T YN Q NL+R ++I
Sbjct: 1312 EAEYIVAMFQYLIAIGYPSEKITVLTTYNGQKNLLRDVFKAKCTPQDPKKTQYGLPLKIT 1371
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
TIDKYQG+ D IL+S VR+ + + D R+ VA++RA+
Sbjct: 1372 TIDKYQGQQNDIILLSLVRTKQYGH------IRDVRRLIVAMSRAR 1411
Score = 81 (33.6 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 24/59 (40%), Positives = 32/59 (54%)
Query: 1096 KFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSE-EHPQAISALQSQYRMCQGIMEL 1152
+ +L+GDH QLPP+VQ+ A+ + + SLF RL E P L Q R I EL
Sbjct: 1197 RVILIGDHNQLPPIVQNQSLAKYSHFDQSLFTRLIRLEIPHI--TLDRQGRSRPSISEL 1253
Score = 75 (31.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 31/124 (25%), Positives = 58/124 (46%)
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLI 1006
Q AI + + LI+G PGTGKT V + + + L+ +++N A++ L
Sbjct: 868 QIEAISSGMKRDNLTLIVGPPGTGKTDIAVQIISNIYHSSPNERTLIITHSNQALNQLFE 927
Query: 1007 KLKSQSID---FVRIGRHEVV---HKEIQKHCLSAMNINSVEEIK-KRLDQVKVVAVTCL 1059
K+ I+ +R+G + QK I+ +++ K+LDQV +A + +
Sbjct: 928 KIYRLDINERYLLRLGHGQKQLSSTNSTQKDFTKTGRIDFWLDLRLKKLDQVDKLAKS-I 986
Query: 1060 GITN 1063
+T+
Sbjct: 987 SVTD 990
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 33/127 (25%), Positives = 57/127 (44%)
Query: 985 LMRGASILLTSYTNSAVDN---LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSV 1041
+++ + T+ T ++VDN L+ +K I+ + + KE+++ C + S
Sbjct: 1050 ILKNDKLFDTTTTTTSVDNHHQSLLNIKKNLIELWNYIKE--IFKELEE-CKVFELLKSP 1106
Query: 1042 EEIKKRL--DQVKVVAVTCLGIT---NPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+ L Q K+VA+TC N LL KFD +M+E+ Q + S PL
Sbjct: 1107 NDRYNYLLLKQSKIVAMTCTHAALKRNELLRLGFKFDNLLMEESAQISDIESFIPLQLQL 1166
Query: 1096 KFVLVGD 1102
+GD
Sbjct: 1167 NSNEIGD 1173
Score = 46 (21.3 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 554 QDLNTPTVDFGS--DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
Q+ ++P+ F + + L ++ +SE+TDIE+ + +K I+A V+ RNE
Sbjct: 149 QEESSPSSSFKNLFESLLQIDLSELTDIEKCNF-----IKFFINAFQNVEDVLVRNE 200
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
+Y L ++ERYL + G ++ TQ
Sbjct: 929 IYRLDINERYLLRLGHGQKQLSSTNSTQ 956
>TAIR|locus:2064158 [details] [associations]
symbol:EMB2765 "EMBRYO DEFECTIVE 2765" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR024860 InterPro:IPR026300 PIRSF:PIRSF038901
GO:GO:0005886 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005681 GO:GO:0000398 eggNOG:COG1112 HOGENOM:HOG000170551
KO:K12874 OMA:RTKAVGH GO:GO:0097157 PANTHER:PTHR10887:SF5
EMBL:AY099864 IPI:IPI00544394 RefSeq:NP_850297.1 UniGene:At.23967
ProteinModelPortal:Q8L5Y4 SMR:Q8L5Y4 STRING:Q8L5Y4 PaxDb:Q8L5Y4
PRIDE:Q8L5Y4 EnsemblPlants:AT2G38770.1 GeneID:818459
KEGG:ath:AT2G38770 TAIR:At2g38770 InParanoid:Q8L5Y4
PhylomeDB:Q8L5Y4 ProtClustDB:CLSN2680117 Genevestigator:Q8L5Y4
Uniprot:Q8L5Y4
Length = 1509
Score = 122 (48.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 82/302 (27%), Positives = 132/302 (43%)
Query: 1050 QVKVVAVTC----LGITNPLLTDKKFDVCIMDEAGQ-----TTLPVSL-----GPLMFAS 1095
Q K+VA+TC L + L K+D +M+E+ Q T +P+ L G
Sbjct: 1092 QAKIVAMTCTHAALKRRDFLQLGFKYDNLLMEESAQILEIETFIPMLLQRQEDGHARL-K 1150
Query: 1096 KFVLVGDHYQLPPLVQSTEARE-NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
+ +L+GDH+QLPP+V++ ++ + M+ SLF R I ++ QG S
Sbjct: 1151 RCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVR---LGIPYIELN---AQGRARPSL 1204
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT 1214
A +Y R ++ + I V + +P + A N + ++ P YE + T
Sbjct: 1205 AKLYNWRYR----DLGDLSI-VKE----APIFQRA-NAGFSYEYQLVNV-PDYEGRGEST 1253
Query: 1215 -----LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV------ 1263
N EA I + + I I+T YN Q LIR ++ V
Sbjct: 1254 PSPWFYQNQGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYPFIG 1313
Query: 1264 ---EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
++ T+DK+QG+ D IL+S VR+ L D R+ VA++RA+ L +
Sbjct: 1314 PPSKVTTVDKFQGQQNDFILLSLVRTR------FVGHLRDVRRLVVAMSRARLGLYVF-- 1365
Query: 1321 CR 1322
CR
Sbjct: 1366 CR 1367
Score = 78 (32.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
+++G PGTGKT T V + L S L+ +++N A+++L K+ + + +R+
Sbjct: 884 MVVGPPGTGKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRL 943
Query: 1019 GRHE 1022
G+ E
Sbjct: 944 GQGE 947
>UNIPROTKB|F1MUW2 [details] [associations]
symbol:F1MUW2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0097157 "pre-mRNA intronic binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0000398 OMA:RTKAVGH
GO:GO:0071013 GO:GO:0097157 PANTHER:PTHR10887:SF5
GeneTree:ENSGT00700000104467 EMBL:DAAA02028420 EMBL:DAAA02028416
EMBL:DAAA02028417 EMBL:DAAA02028418 EMBL:DAAA02028419
IPI:IPI00852511 Ensembl:ENSBTAT00000016895 Uniprot:F1MUW2
Length = 1466
Score = 97 (39.2 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 39/151 (25%), Positives = 77/151 (50%)
Query: 1020 RH-EVVHKEIQKHCLSAMNINSVEEIKKRL-DQVKVVAVTCLGIT---NPLLT-DKKFDV 1073
RH + + ++++ S + + ++ K L + K++A+TC + L+ K+D
Sbjct: 981 RHIKKIFTQLEEFRASELLRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVKLGFKYDN 1040
Query: 1074 CIMDEAGQ-----TTLPVSL-GPLM-FA--SKFVLVGDHYQLPPLVQSTEARE-NGMEIS 1123
+M+EA Q T +P+ L P F+ +++++GDH+QLPP++++ ++ + ME S
Sbjct: 1041 ILMEEAAQILEIETFIPLLLQNPQDGFSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQS 1100
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
LF R + L +Q R + L N
Sbjct: 1101 LFTRFVRVGVPTVD-LDAQGRARASLCNLYN 1130
Score = 80 (33.2 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 1241 IGIITPYNSQANLIR---------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+T YN Q +LIR + L ++ T+D++QG+ D IL+S VR+
Sbjct: 1206 ISILTTYNGQKHLIRDIINRRCGSNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---- 1261
Query: 1292 NCTSSLLGDWHRINVALTRAK 1312
L D R+ VA++RA+
Sbjct: 1262 --AVGHLRDVRRLVVAMSRAR 1280
Score = 72 (30.4 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID---FVRI 1018
+++G PGTGKT V + + L+ +++N A++ L K+ + ID +R+
Sbjct: 803 MVVGPPGTGKTDVAVQIISNIYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRL 862
Query: 1019 GRHE 1022
G E
Sbjct: 863 GHGE 866
Score = 44 (20.5 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
Identities = 16/46 (34%), Positives = 21/46 (45%)
Query: 96 PIDDETNSTHHSPEISK-RFKFSPEMLIKLSQYDGGDEVTW-NISP 139
P D + + EI K RF ML++ SQY + W N SP
Sbjct: 40 PFDIKVIEDIYEKEIVKSRFAIRKIMLLEFSQYL--ENYLWMNYSP 83
>UNIPROTKB|E2R8C1 [details] [associations]
symbol:HELZ "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 GO:GO:0008270
GO:GO:0003676 CTD:9931 OMA:YRVALLY GeneTree:ENSGT00550000074391
EMBL:AAEX03006372 EMBL:AAEX03006373 EMBL:AAEX03006374
RefSeq:XP_862371.2 Ensembl:ENSCAFT00000018141 GeneID:490907
KEGG:cfa:490907 Uniprot:E2R8C1
Length = 1944
Score = 164 (62.8 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 82/331 (24%), Positives = 139/331 (41%)
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK--VVAVTCLGITNPL----LTDKKFDVCI 1075
+ VH + ++CL + + +S ++ ++ D +K VV VT L + L L F +
Sbjct: 735 KTVHPVVHQYCLIS-SAHSTFQMPQKEDILKHRVVVVT-LNTSQYLCQLDLEPGFFTHIL 792
Query: 1076 MDEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q ++ PL A+K VL GDH QL P V S ARE + +SL RL E +
Sbjct: 793 LDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHY 852
Query: 1133 PQAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
P L YR + I+ ++ L Y +L + A+ L+ + ++
Sbjct: 853 PAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFY--PLTFFTARGEDV 910
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ N ++ E + PV +++ IG++TPY
Sbjct: 911 QEKNSTAFYNNAEVFEVVERVEELRRKWPV------------AWGKLDDGSIGVVTPYAD 958
Query: 1250 QANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS------SENP--------RN 1292
Q IR L +S V + + QG+ + +S VR+ + P +
Sbjct: 959 QVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLED 1018
Query: 1293 CTSSL----LGDWHRINVALTRAKKKLIMVG 1319
T L L ++ +N A+TRA+ + +VG
Sbjct: 1019 STEDLDYGFLSNYKLLNTAITRAQSLVAVVG 1049
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
T V+AV L + ++ T T V I+ K++ F+RI R
Sbjct: 529 TKVNAVYLLPVPKEKLVQTQGTKEKVYEATIEEKTKEYIFLRISR 573
Score = 38 (18.4 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 231 LSYYHDKLANGVACNG 246
LS YH + G +CNG
Sbjct: 150 LSGYHVEDLEGGSCNG 165
>ASPGD|ASPL0000064563 [details] [associations]
symbol:AN7014 species:162425 "Emericella nidulans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0097157
"pre-mRNA intronic binding" evidence=IEA] InterPro:IPR024860
InterPro:IPR026300 PIRSF:PIRSF038901 GO:GO:0005681 EMBL:BN001304
GO:GO:0004386 GO:GO:0000398 HOGENOM:HOG000170551 GO:GO:0097157
PANTHER:PTHR10887:SF5 ProteinModelPortal:C8VC84
EnsemblFungi:CADANIAT00000462 OMA:TIYENEM Uniprot:C8VC84
Length = 1422
Score = 85 (35.0 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 34/111 (30%), Positives = 52/111 (46%)
Query: 1241 IGIITPYNSQANLIR----HSLSVSSVE-----IHTIDKYQGRDKDCILVSFVRSSENPR 1291
I I+ Y Q LI+ H S +++ + T+D+YQG D I++S R+
Sbjct: 1228 ISILATYAGQTALIKDVLNHRCSKNTLFGMPKIVTTVDRYQGEQNDYIILSLTRTR---- 1283
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVG------SCRTLSKVPLLKLLINK 1336
T L D R+ VAL+RA+ L ++G SC L P LL+ +
Sbjct: 1284 --TVGYLRDVRRLTVALSRARLGLYILGRREVFESCYELK--PAFDLLLQR 1330
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 33/93 (35%), Positives = 44/93 (47%)
Query: 1071 FDVCIMDEAGQTT-----LPVSL-----GPLMFASKFVLVGDHYQLPPLVQSTEARENG- 1119
+D +M+EA Q T +P +L G L + VL GDH Q P++Q+ R+
Sbjct: 1060 YDNIVMEEAAQITEVESFIPTALQNMKEGQLPL-KRIVLCGDHLQNSPIIQNLAFRQYAH 1118
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
E SLF RL AI+ L Q R I EL
Sbjct: 1119 FEQSLFLRLIRLGVPAIT-LDQQGRARPSIAEL 1150
Score = 71 (30.1 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 20/70 (28%), Positives = 34/70 (48%)
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTSYTNSAVDNLLIKLKSQSID- 1014
T +I+G PGTGKT + + + LL +++N A++ L K+ + ID
Sbjct: 820 TQPGLTVIVGPPGTGKTDVATQIINNIYHNFPTERTLLVAHSNQALNQLFQKIVALDIDE 879
Query: 1015 --FVRIGRHE 1022
+R+G E
Sbjct: 880 RHLLRLGHGE 889
Score = 44 (20.5 bits), Expect = 0.00032, Sum P(4) = 0.00032
Identities = 17/58 (29%), Positives = 23/58 (39%)
Query: 42 VSSFPQ---NPNSDLIHSVSSPNCPPF-SVYRNPS-DSAPSKKNSPQSALENTPPDNI 94
+ SFP P+ D S P + PS SAP K+ Q A E P ++
Sbjct: 726 IESFPGLTIEPSGDATSSFQPPYVLEYVEESAQPSTSSAPKKRRRDQHAEERGGPKSL 783
>ZFIN|ZDB-GENE-040426-2419 [details] [associations]
symbol:helz "helicase with zinc finger"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR011539 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 ZFIN:ZDB-GENE-040426-2419 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 GO:GO:0003676
GO:GO:0004386 eggNOG:COG1112 EMBL:BC066461 IPI:IPI00500029
RefSeq:NP_998431.1 UniGene:Dr.35354 ProteinModelPortal:Q6NYU2
GeneID:406550 KEGG:dre:406550 CTD:9931 HOGENOM:HOG000231202
HOVERGEN:HBG031603 OrthoDB:EOG4NP72K NextBio:20818112
ArrayExpress:Q6NYU2 Uniprot:Q6NYU2
Length = 1860
Score = 152 (58.6 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 69/279 (24%), Positives = 115/279 (41%)
Query: 1022 EVVHKEIQKHCL-SAMNINSVEEIKKRLDQVKVVAVTCLGITNPL----LTDKKFDVCIM 1076
+ VH +Q++CL S + ++ +++ +VV VT L + L L F ++
Sbjct: 728 KTVHPLVQQYCLISGAHFTFQMPTRQDVERHRVVVVT-LSTSQYLCQLDLEPGIFTHILL 786
Query: 1077 DEAGQTTLPVSLGPLMFASK---FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
DEA Q ++ PL A K VL GDH QL P V S ARE + +SL RL E +P
Sbjct: 787 DEAAQAMECETIMPLALAVKSTRVVLAGDHMQLSPFVYSEFARERNLHVSLLDRLYEHYP 846
Query: 1134 QAISA---LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
L YR + I+ ++ L Y +L + + L+ + ++
Sbjct: 847 SEYPCRILLCENYRSHEAIINYTSDLFYEGKLMASGKQPPHKDFY--PLTFFTARGEDVQ 904
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
+ N ++ E + PV ++E IG+++PY Q
Sbjct: 905 EKNSTAYYNNAEVFEIVERVEEMRKKWPVSW------------GKLEEGSIGVVSPYADQ 952
Query: 1251 ANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRS 1286
IR L +S V + + QG+ + +S VR+
Sbjct: 953 VFRIRAELRKKRMSEVSVERVLNVQGKQFRVLFLSTVRT 991
Score = 43 (20.2 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
L ++ +N A+TRA+ + +VG L V
Sbjct: 1021 LSNYKLLNTAITRAQSLVAVVGDPIALCSV 1050
Score = 38 (18.4 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 963 ALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVD 1002
AL+ P T ST + +ALL R A + L Y + D
Sbjct: 32 ALLAMGPRTPTPSTALLRTRALLYRIAARLQLKDYDQADED 72
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1345 1304 0.00083 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 167
No. of states in DFA: 632 (67 KB)
Total size of DFA: 564 KB (2255 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 118.21u 0.12s 118.33t Elapsed: 00:00:06
Total cpu time: 118.30u 0.12s 118.42t Elapsed: 00:00:06
Start: Tue May 21 00:19:16 2013 End: Tue May 21 00:19:22 2013
WARNINGS ISSUED: 1