BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000698
(1345 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224132094|ref|XP_002321254.1| predicted protein [Populus trichocarpa]
gi|222862027|gb|EEE99569.1| predicted protein [Populus trichocarpa]
Length = 1152
Score = 1696 bits (4393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 860/1229 (69%), Positives = 983/1229 (79%), Gaps = 88/1229 (7%)
Query: 121 LIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQ 180
LIK SQ DGGDEVTW ISPV+ERL AVSKQMP + I++LA +S+LNS +I
Sbjct: 2 LIKQSQDDGGDEVTWKISPVSERLQAVSKQMP-QLIQLLAETSKLNSFSI---------- 50
Query: 181 PSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLSYYHDKLAN 240
G KR+NP +D NL + N S++ +QSPFRTPPSLSY H+KL+N
Sbjct: 51 -------------LGLKRINPRQDVNL----TDVNCSLAGRQSPFRTPPSLSYCHEKLSN 93
Query: 241 GVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQRSFV 300
CNGASD L R
Sbjct: 94 VAECNGASDQLDQRQ--------------------------------------------- 108
Query: 301 CHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSVVNGVPTDPPE 360
HK+A LELLDQV+DAISV+ S S + SK+QD NG M A S+V DPPE
Sbjct: 109 --HKKALLELLDQVEDAISVEDSEPSTVNS--SKTQDGNGYDMPCNAGSLVKEAAIDPPE 164
Query: 361 NVN-GTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIA 419
+V S+ +FLVLEVSEK+RPAD A+ PYKVLRLLNEQSGEER V+LWE+WF++VI+
Sbjct: 165 SVAVPLSNYNFLVLEVSEKHRPADLSGAQCPYKVLRLLNEQSGEERTVYLWEEWFYSVIS 224
Query: 420 PGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER 479
PGDTVNVIGEFDDQGKCDV RENN LIVHPD+LVSGTRVAASFSCPRR+VLDERLKCSE
Sbjct: 225 PGDTVNVIGEFDDQGKCDVDRENNLLIVHPDILVSGTRVAASFSCPRRTVLDERLKCSEH 284
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA 539
S +AL+GTLLHQIFQAGLM++ PT+ FLEEYAR+VLQKNIESL+ACGVNENDI TLVEA
Sbjct: 285 STAALIGTLLHQIFQAGLMQDNPTINFLEEYARIVLQKNIESLHACGVNENDIFNTLVEA 344
Query: 540 IPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWAPKYGLKGMIDASI 598
IPK++NWI L QD P +DFG D GLKKL ISEV DIEEMAWAPKYGLKGMIDAS+
Sbjct: 345 IPKLINWINLCM--QDSKAPIIDFGLDNGLKKLSISEVIDIEEMAWAPKYGLKGMIDASV 402
Query: 599 RVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYY 658
RVK+ES RN+ + I+PLEFKTGK SSMEH AQVILYTLLMSERYLKHIDSGLLYY
Sbjct: 403 RVKVESGRNKADEKIVPLEFKTGK-----SSMEHVAQVILYTLLMSERYLKHIDSGLLYY 457
Query: 659 LQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKECSGLGNMFD 718
LQSDQT+G+ VQRSD+VGLIMRRNE ANDI+KAS TQQLPPML+ +GG+KE SGLG++FD
Sbjct: 458 LQSDQTRGITVQRSDVVGLIMRRNELANDILKASRTQQLPPMLQVHGGSKESSGLGDLFD 517
Query: 719 SHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNE 778
SH++HLTTAH FLR WD+LIDLEAKE Q+VKN IW + T CLSS+VLD S+
Sbjct: 518 SHVHHLTTAHYVFLRRWDQLIDLEAKETQLVKNRIWRPHSLKSDRSTSCLSSVVLDTSDR 577
Query: 779 --HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
+QKS +DNRF+Y FV + MP +++AS G+SL + +D D TL+SGDYVI+ST+
Sbjct: 578 VPYQKSLKDNRFIYRFVHKKMPLHDVHASGGESLSFPSSSAEDFDYTLKSGDYVIISTKF 637
Query: 837 DRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
R VASG IT+ISR HVSVSF K LRLPG NSSS+A L EVW+IDKDE MTSFSVMR
Sbjct: 638 GRQTVASGFITDISRSHVSVSFPKHLRLPGSNSSSEAHDLFREVWQIDKDEFMTSFSVMR 697
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
+NLVQLFLQS QSS LR+MIVDLEAPRFDSG +FSQDPALSYIWS K+LN DQRRAI+K
Sbjct: 698 FNLVQLFLQSEQSSHLRKMIVDLEAPRFDSGCIFSQDPALSYIWSVKNLNGDQRRAILKT 757
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
LTAKDYALILGMPGTGKTST+VHAVKA+LMRGASILLTSYTNSA+DNLLIKLK+Q IDF+
Sbjct: 758 LTAKDYALILGMPGTGKTSTLVHAVKAMLMRGASILLTSYTNSAIDNLLIKLKAQGIDFL 817
Query: 1017 RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
RIGRHEVVH+E++ +C+SAM+++SVE+IK RL+QVKVVAVTCLGI++PLL +KKFDVCIM
Sbjct: 818 RIGRHEVVHEEVRANCVSAMDVHSVEDIKLRLEQVKVVAVTCLGISSPLLANKKFDVCIM 877
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEAGQ TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM ISLF RLSE HPQAI
Sbjct: 878 DEAGQITLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMGISLFCRLSEAHPQAI 937
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV 1196
SALQSQYRMCQ IMELSNALIYGDRL CGS EIANA++K S L SCS WLKE LNP RPV
Sbjct: 938 SALQSQYRMCQDIMELSNALIYGDRLRCGSSEIANARLKFSGLQSCSSWLKEVLNPGRPV 997
Query: 1197 IFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
IF+NTDMLPAYEAKD +T+NNP+EA ++A++T+EL+ N I G DIGIITPYNSQANLIR
Sbjct: 998 IFINTDMLPAYEAKDSKTVNNPIEAYIVAEVTKELLNNGIVGDDIGIITPYNSQANLIRA 1057
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
S++V+SVEIHTIDKYQGRDK+CILVSF RSSENPRNCTSSLLGDWHRINVALTRAKKKLI
Sbjct: 1058 SVNVTSVEIHTIDKYQGRDKECILVSFARSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1117
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+VGSC+TLSKVPLLKLL+ KV EQSGI+N
Sbjct: 1118 LVGSCKTLSKVPLLKLLVEKVEEQSGIIN 1146
>gi|359489182|ref|XP_002265239.2| PREDICTED: DNA2-like helicase-like [Vitis vinifera]
Length = 1438
Score = 1635 bits (4235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 848/1327 (63%), Positives = 1003/1327 (75%), Gaps = 123/1327 (9%)
Query: 66 SVYRNPSDSAPS------KKNSPQSALENTPPDNI--LPIDDETNSTHHSPEISK----- 112
S +NP ++ PS +K P + ++TPP NI + +D E N + SPE+SK
Sbjct: 169 STRKNPRNAFPSASTSNSRKTDPNNPSQSTPPGNIPAMAVDVEENPSQVSPEVSKSMALK 228
Query: 113 RFKFSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQ 172
RFKFSP MLIK SQ DG DEVTW ISPVNERL A++K+ PE +RVL ++SRL SL Q
Sbjct: 229 RFKFSPGMLIKQSQDDGSDEVTWKISPVNERLQAMTKKHGPEVMRVLGDASRLISLNFRQ 288
Query: 173 CSHNKSKQPS----------PSPKAINRSLT-TGRKRVNPCEDAN-LDGNGNNANYSVSS 220
CS NK+ S P+ KA +S+ + R + + +D NGN +
Sbjct: 289 CSQNKTSPDSEGKLEKWLCSPTMKASEKSVVFSNRVSLKKVKLGQVMDSNGNEIDM---- 344
Query: 221 QQSPFRTPPSLSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILH 280
T P ++ +GV C SD +GLR
Sbjct: 345 ------TDPGVNI------DGVDCKLVSDQMGLRQ------------------------- 367
Query: 281 NTIRFISTWYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNG 340
HK+A LELLDQV+DAISV+ SVSSD EA LSK Q NG
Sbjct: 368 ----------------------HKKALLELLDQVEDAISVEESVSSDGEACLSKVQCING 405
Query: 341 AGMLLEANSVVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQ 400
M L + + P E +VSEK AD A+ P KVLRLLNE+
Sbjct: 406 DEMPLRVDPALKIPEMGPTE-------------KVSEKREYADLSGAQCPSKVLRLLNEK 452
Query: 401 SGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAA 460
+GEE+AV+L ++WF++VIAPGDT++VIG+FDDQGKCDV +NNFLIVHPD+LVSGTRVAA
Sbjct: 453 TGEEQAVYLRDEWFYSVIAPGDTIHVIGKFDDQGKCDVDHDNNFLIVHPDILVSGTRVAA 512
Query: 461 SFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIE 520
SFSC RR+VLDERLKCSE S +AL+GTLLHQIFQAGL++EIPT FLEEYAR+V+QKN+E
Sbjct: 513 SFSCSRRTVLDERLKCSEHSTAALIGTLLHQIFQAGLIREIPTKVFLEEYARIVVQKNLE 572
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDI 579
SLYACGVNE+D++KTL+EA P++LNWI+LFK+SQ+ TVDFGSD GLK++ +SEV DI
Sbjct: 573 SLYACGVNEDDMYKTLIEATPRILNWIVLFKNSQEYRGATVDFGSDDGLKRVNVSEVIDI 632
Query: 580 EEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILY 639
EEMAWAPKYGLKGMIDAS+R+K ES E+N +I+PLEFKTGK GQ++MEH AQVILY
Sbjct: 633 EEMAWAPKYGLKGMIDASLRIKFESNTKEVNEIIMPLEFKTGKGTKGQATMEHTAQVILY 692
Query: 640 TLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPP 699
TLLMSERYLK IDSGLLYYL +D TQG+ V+RSDLVGLIMRRNE A DI+KAS QQLPP
Sbjct: 693 TLLMSERYLKPIDSGLLYYLNTDHTQGIAVKRSDLVGLIMRRNELAKDILKASMMQQLPP 752
Query: 700 ML-------------------RAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLID 740
ML +A+GG+ E SGLG++FDS+I HLTT+H +FLRHWD LID
Sbjct: 753 MLQSPSMCKSCRHLNACTIYHKAHGGSMESSGLGDLFDSNINHLTTSHFAFLRHWDWLID 812
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEH--QKSYRDNRFVYHFVRQHMP 798
LEAKEM+V+K IW S + T CLSSIVLD SN+H + S++DN+F+Y FVRQ++P
Sbjct: 813 LEAKEMEVMKKGIWRSHSLKRDPSTSCLSSIVLDTSNKHPQKNSFKDNKFIYRFVRQNVP 872
Query: 799 SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSF 858
S ++ + DSL + P D+DCTLR+GDYVILSTES LA+ASG+IT+ISRFHV V F
Sbjct: 873 SFHVKEHNEDSLPSVSSPANDLDCTLRNGDYVILSTESGHLALASGVITDISRFHVYVCF 932
Query: 859 SKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVD 918
SK LRLP SS+ LL EV+RI+KDEI+TSF+VMR+NL+QLFLQS Q S LR+MIVD
Sbjct: 933 SKRLRLPWSKRSSEEQDLLGEVFRINKDEIVTSFAVMRFNLIQLFLQSMQGSHLRKMIVD 992
Query: 919 LEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
LE PRFD G +FSQDPA+SYI SEKSLN+DQR+AI+K+LTAKDYALILGMPGTGKTSTMV
Sbjct: 993 LEVPRFDGGCIFSQDPAISYIRSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMV 1052
Query: 979 HAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNI 1038
HAVKALLMRGASILLTSYTNSAVDNLLIKLK+Q+IDFVRIGRHEVVH+EIQ HC S M+I
Sbjct: 1053 HAVKALLMRGASILLTSYTNSAVDNLLIKLKAQNIDFVRIGRHEVVHEEIQGHCFSGMDI 1112
Query: 1039 NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
+SVE+IK RLDQV VVAVTCLGITNPLL +K+FD+CIMDEAGQTTLPVSLGPLMFAS FV
Sbjct: 1113 HSVEDIKLRLDQVSVVAVTCLGITNPLLANKRFDICIMDEAGQTTLPVSLGPLMFASIFV 1172
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGDHYQLPPLVQS EARENGM ISLF RLSE HPQAISALQSQYRMCQ IM LSNALIY
Sbjct: 1173 LVGDHYQLPPLVQSAEARENGMGISLFCRLSEAHPQAISALQSQYRMCQSIMALSNALIY 1232
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
G+RL CGS +IANA++K S +S S WLKEAL+P RPVIF+NTDML A+EAKDH+T+NNP
Sbjct: 1233 GNRLRCGSSQIANARLKFSSSNSISSWLKEALDPERPVIFINTDMLSAFEAKDHKTVNNP 1292
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
+EAC+I+++ +ELV N IEG+DIGIITPYNSQANLIRH++S +SVEI+TIDKYQGRDKDC
Sbjct: 1293 IEACIISEVAEELVNNGIEGEDIGIITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDC 1352
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK+KLIMVGS RTLSKVPLL+LLI KV
Sbjct: 1353 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKRKLIMVGSFRTLSKVPLLRLLIEKVE 1412
Query: 1339 EQSGILN 1345
EQSG LN
Sbjct: 1413 EQSGRLN 1419
Score = 45.4 bits (106), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 24/95 (25%)
Query: 1 MPQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSP 60
M RKK +S QP+KFGIQHFF RH+Q+S+ PN +V +P
Sbjct: 1 MAPRKKPSSKSNQNQPNSQPSKFGIQHFFLRHSQSST---------SRPND----AVCTP 47
Query: 61 NCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNIL 95
P PS SAP +N P +A P+N+L
Sbjct: 48 GPNP------PSQSAPPLQN-PTAAC----PENVL 71
>gi|449433149|ref|XP_004134360.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Cucumis sativus]
gi|449518346|ref|XP_004166203.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Cucumis sativus]
Length = 1379
Score = 1557 bits (4032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 839/1421 (59%), Positives = 1015/1421 (71%), Gaps = 135/1421 (9%)
Query: 1 MPQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSP 60
MP RKK +S + + Q QP+KFGI+HFF+RH+QN S + +SS + +D+ +S++
Sbjct: 1 MPPRKKPSSKKLNSNQQSQPSKFGIEHFFERHSQNVSHSQKISSQTSDSKTDVSNSMNRG 60
Query: 61 NCPPFSVYRNP--------------------SDSAPS-------KKNSPQSALENTPPDN 93
+ + SD+ + ++N + NT P+N
Sbjct: 61 DDRNMGRLDSKDAAGAAAATAQKSESRVLLVSDAVLASENPKVLQRNDASCSPLNTTPEN 120
Query: 94 ILPI---DDETNSTHHSPEISK-----RFKFSPEMLIKLSQYDGG--DEVTWNISPVNER 143
++ D + +S SPE SK RFKFSP MLIK SQ +G DE+TW ISPVNER
Sbjct: 121 LIAARGNDGDDSSNELSPEFSKSVSLKRFKFSPGMLIKQSQDEGTRTDEITWKISPVNER 180
Query: 144 LLAVSKQMPPENIRVLANSSRLNSLTIHQCSHNKSKQ---------PSPSPKAINRSLT- 193
L AVSKQ+P E IRVLANSSRL+SL I QCS NK+ SP+PK RS+
Sbjct: 181 LQAVSKQLP-ETIRVLANSSRLSSLRIRQCSRNKTSSVESGNFEQLSSPNPKPSERSIAS 239
Query: 194 ---TGRKRVNPCEDANLDGNGNNANYSVSSQQSP--FRTPPSLSYYHDKLANGVA-CNGA 247
TG KRVNP D G N++ S SP F+TPPSLSY DK+AN VA CN A
Sbjct: 240 LNKTGLKRVNPKHDGEPIGVVNDSLSSSRVANSPSRFQTPPSLSYC-DKVANDVAACNEA 298
Query: 248 SDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQRSFVCHHKQAF 307
DH LR HK+A
Sbjct: 299 PDHPILRP-----------------------------------------------HKKAL 311
Query: 308 LELLDQVKDAISVDASVSS-DKEAYLSKSQDKNGAGMLLEANSVVNGVPTDPPENVNGTS 366
LELLDQV+D I+VD SS D S+ + +NG + +S +P + V
Sbjct: 312 LELLDQVEDVIAVDTVASSIDLGDDSSELKGRNGKTLTARVDSAAMKIPKRVSDTVMKAC 371
Query: 367 SCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNV 426
C FLVLEV+EK AD K YKVLRLLNEQSGEERA +LWEDWF ++IAPGDTVNV
Sbjct: 372 PCDFLVLEVTEKCELADTYGVKRSYKVLRLLNEQSGEERAAYLWEDWFDSIIAPGDTVNV 431
Query: 427 IGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLG 486
IGEFDDQG+C V R+NNF+I+HPD+LVSGTRVA +CPRRSVLDERLK +E+S++AL+G
Sbjct: 432 IGEFDDQGRCHVDRDNNFVILHPDILVSGTRVAGHLTCPRRSVLDERLKSNEQSVAALIG 491
Query: 487 TLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW 546
TLLHQ+FQAGL++E P + FLEE +R VLQK++E++YACG NE DI T+ EA+PK+L+W
Sbjct: 492 TLLHQVFQAGLVEEAPAVAFLEEVSRTVLQKSMENVYACGANEKDIRITMNEAVPKILHW 551
Query: 547 IILFKDSQDLNTPTVDFGS-DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK 605
I +FK P+++F S D +K+ ISEV DIEEMAWAPKYGLKG+IDAS+RV + S
Sbjct: 552 IAMFKGPMGSKAPSIEFRSEDDPRKVSISEVIDIEEMAWAPKYGLKGIIDASVRVNVMSD 611
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
N+ ++PLEFKTGK+P GQSSMEH AQVILYTLLMSERY KH+ GLLYYL+S+QTQ
Sbjct: 612 YNKCAVNVMPLEFKTGKVPAGQSSMEHCAQVILYTLLMSERYQKHVGYGLLYYLRSNQTQ 671
Query: 666 GVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML-------------------RAYGG 706
G+ VQRSDLVGLIMRRNE AN+I+KAST Q LPPML + G
Sbjct: 672 GIRVQRSDLVGLIMRRNELANNILKASTAQSLPPMLQIPNVCKGCRHLDVCTIYHKMQNG 731
Query: 707 NKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG 766
+KE SGLG +F+SH HL +H F +HW+RLIDLEAKEM++VK +W SR + N +
Sbjct: 732 SKETSGLGVLFESHTDHLQASHGIFFQHWERLIDLEAKEMELVKRGVWHSRSTDKNQTST 791
Query: 767 CLSSIVLDASNE--HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTL 824
CLSSIVL ++ H +DNR Y FVRQ S+ DS A+I DMD +L
Sbjct: 792 CLSSIVLSTLDDQPHCTFEKDNRISYCFVRQD--------SNNDSSNTASI--NDMDSSL 841
Query: 825 RSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
R GDYVILST+S L +ASG+IT++S HVSVSFSK LRLPG SS++A L+ +VWRID
Sbjct: 842 RVGDYVILSTDSGHLTLASGIITDLSSVHVSVSFSKRLRLPGSTSSTEARDLMKQVWRID 901
Query: 885 KDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS 944
KDE MTSF+VMR+NLVQLFLQ Q++ LR++IVDL APRFD G +FSQDPA+SYIWSEK+
Sbjct: 902 KDEFMTSFAVMRFNLVQLFLQGEQNAHLRKLIVDLAAPRFDGGCIFSQDPAISYIWSEKN 961
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQRRAIIK+LTAKDYALILGMPGTGKTSTMVHAVKALLMRG SILLTSYTNSAVDNL
Sbjct: 962 LNDDQRRAIIKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGVSILLTSYTNSAVDNL 1021
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
LIKLKSQ+IDF+RIGR VH++I+ HC S +NI SVE+IK RLDQVKVVAVTCLGIT+P
Sbjct: 1022 LIKLKSQNIDFIRIGRINAVHEDIRSHCFSELNIQSVEDIKMRLDQVKVVAVTCLGITSP 1081
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
LL +KKFD+CIMDEAGQTTLPVSLGPLMFAS FVLVGDHYQLPPLVQSTEARENG+ ISL
Sbjct: 1082 LLVNKKFDICIMDEAGQTTLPVSLGPLMFASTFVLVGDHYQLPPLVQSTEARENGLGISL 1141
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RLSE HPQAISALQSQYRMC+ IMELSNALIYGDRL CGS+E ANAK++ S S
Sbjct: 1142 FCRLSEAHPQAISALQSQYRMCRDIMELSNALIYGDRLRCGSEETANAKLEFSSSKLSSS 1201
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WLKE LNPC+PVIFV TD+LPAYE +DH+ +NNP+EA ++A++T+ L+ I+G ++GII
Sbjct: 1202 WLKEVLNPCKPVIFVCTDLLPAYETRDHKIVNNPIEANILAEVTKGLLDGGIKGSEVGII 1261
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
TPYNSQA++IR +++++SVE+HTIDKYQGRDKDCILVSFVRSSENP++CT+SLLGDWHRI
Sbjct: 1262 TPYNSQASIIRLAINIASVEVHTIDKYQGRDKDCILVSFVRSSENPKSCTTSLLGDWHRI 1321
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
NVA+TRAKKKLIMVGS +TLSKVPLLKLLI KV EQSGIL+
Sbjct: 1322 NVAITRAKKKLIMVGSRKTLSKVPLLKLLIKKVEEQSGILS 1362
>gi|15221015|ref|NP_172361.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
gi|332190235|gb|AEE28356.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
Length = 1296
Score = 1507 bits (3902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/1359 (58%), Positives = 969/1359 (71%), Gaps = 85/1359 (6%)
Query: 1 MPQRKKANSSRKLQSSQP------QPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLI 54
MP RKK SS + Q QP+ FGIQ F RH QNS + + +P
Sbjct: 1 MPPRKKPKSSALKSNKQSSANHSSQPSTFGIQQLFLRHIQNSQSTSNSHTSTADP----- 55
Query: 55 HSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRF 114
V N + SD+A +P N PD +D + T SP+ISK
Sbjct: 56 --VDQQNVNGLA-----SDTAVLTPQNPLGT-SNEKPDESKDMDQQL--TEASPKISKNL 105
Query: 115 K-FSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQC 173
K FSP MLIK SQ D G E+TW ISPVNERL A +K +P + + + NS T
Sbjct: 106 KRFSPGMLIKQSQDDCGGEITWKISPVNERLRAAAKNIP-KMMDLTENSLGKQCPTSGIT 164
Query: 174 SHNKSKQPSPSPKAINR-SLTTGR--KRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPS 230
S + SPS KA R + T R +RVNP DA + N S SS SPF+TPPS
Sbjct: 165 SKVEQWLSSPSKKASKRPAFATNRVMERVNPSPDAEFE----IVNTS-SSGNSPFQTPPS 219
Query: 231 LSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWY 290
LS H+KL V C+GA +G
Sbjct: 220 LSCPHNKLPCTVTCSGACGSMG-------------------------------------- 241
Query: 291 IPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSV 350
HK+A LELLDQV+D I+VD + D + +++ K+ + +
Sbjct: 242 ---------AGQHKKALLELLDQVEDVIAVDDKTTDDVGIVMPQARVKDDI-ISSVVDCA 291
Query: 351 VNGVPTDPPENVNGTS-SCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHL 409
V+ P P+ N + +FLVLEVSEK + PYKVLRLL+E +G E A++L
Sbjct: 292 VDEGPVSLPKMQNSINPDSYFLVLEVSEKRGSGSSSKGQCPYKVLRLLDEHTGVECALYL 351
Query: 410 WEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSV 469
W++WF++ ++PGD++NVIGEFD GKCDV R+NNFLIVHPD LV+GTRVAASF CPRR+V
Sbjct: 352 WDEWFYSTVSPGDSINVIGEFDGDGKCDVDRQNNFLIVHPDTLVAGTRVAASFGCPRRTV 411
Query: 470 LDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNE 529
LDERL+ +E + ALLGTL HQ+FQAGL +E P++ L+EYA V++K+IESLYACGV+E
Sbjct: 412 LDERLRSNEHATVALLGTLQHQVFQAGLSQESPSVDGLQEYASTVIEKSIESLYACGVHE 471
Query: 530 NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWAPKY 588
D+ TL +AIPKMLNWI F+ S+D VDFGS G K +K+SEV DIEEM+WAPKY
Sbjct: 472 GDVRSTLFKAIPKMLNWIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEVIDIEEMSWAPKY 531
Query: 589 GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL 648
GLKGMIDAS+RV +ES N +N I+PLEFK+GK P+GQSS+EH AQVILYTLLMSERYL
Sbjct: 532 GLKGMIDASVRVIVESDMNTVNEKIMPLEFKSGKAPSGQSSIEHSAQVILYTLLMSERYL 591
Query: 649 KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNK 708
KHID+GLLYYLQSDQTQG+ VQRSDLVGLI+RRNE ANDI+ ASTTQQLPPMLRA GGN
Sbjct: 592 KHIDNGLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLRADGGNT 651
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E SGLG++FD+H+ HL+T H +FLRHWDRLIDLE +EMQ+++ +I GS G+H L
Sbjct: 652 ESSGLGDVFDTHVSHLSTLHFNFLRHWDRLIDLEGREMQLLRKDIAHPHGSKGSHSASYL 711
Query: 769 SSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
SS+VLD +N +H S+++ RF+Y FVRQ + D + + T D+DC LR+
Sbjct: 712 SSMVLDVTNGFQHHNSHKETRFIYRFVRQKSSESRERVTSEDMIRTGNLATDDLDCKLRT 771
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKD 886
GD VIL TE L VA+G+I +ISR H+SVS SK LRLP SS+ +L HE+WRI KD
Sbjct: 772 GDRVILRTEVSHLTVANGIIADISRTHISVSLSKRLRLPWSEPSSEVSNLSHELWRIYKD 831
Query: 887 EIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLN 946
E MTSFSVMR+NL+QLF+Q+ + +R+MIVDLE PRFD+GS+ SQDPA+SYIWSEKSLN
Sbjct: 832 EFMTSFSVMRFNLMQLFVQNGHN--IRKMIVDLEPPRFDNGSILSQDPAISYIWSEKSLN 889
Query: 947 DDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLI 1006
+DQR+AI+K+LTAKDYALILGMPGTGKTSTMVHAVKALL+RG+SILL SYTNSAVDNLLI
Sbjct: 890 NDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLASYTNSAVDNLLI 949
Query: 1007 KLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
KLK+Q I+F+RIGR E VH+E+++ C SAMN+ SVE+IKK+LDQVKVVA TCLGI +PLL
Sbjct: 950 KLKAQGIEFLRIGRDEAVHEEVRESCFSAMNMCSVEDIKKKLDQVKVVASTCLGINSPLL 1009
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+++FDVCI+DEAGQ LPVS+GPL+FAS FVLVGDHYQLPPLVQSTEARENGM ISLFR
Sbjct: 1010 VNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDHYQLPPLVQSTEARENGMGISLFR 1069
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
RLSE HPQAIS LQ+QYRMC+GIMELSNALIYGDRL CGS E+A+A + +S SS SPWL
Sbjct: 1070 RLSEAHPQAISVLQNQYRMCRGIMELSNALIYGDRLCCGSAEVADATLVLSTSSSTSPWL 1129
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
K+ L P R V+FVNTDML A+EA+D +NNPVEA +IA+I +ELV N ++ KDIGIITP
Sbjct: 1130 KKVLEPTRTVVFVNTDMLRAFEARDQNAINNPVEASIIAEIVEELVNNGVDSKDIGIITP 1189
Query: 1247 YNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
YNSQA+LI+H++ + VEIHTIDKYQGRDKDCILVSFVRS E PR+ SSLLGDWHRINV
Sbjct: 1190 YNSQASLIQHAIPTTPVEIHTIDKYQGRDKDCILVSFVRSREKPRSSASSLLGDWHRINV 1249
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
ALTRAKKKLIMVGS RTLS+VPLL LL+NKV EQSGILN
Sbjct: 1250 ALTRAKKKLIMVGSQRTLSRVPLLMLLLNKVKEQSGILN 1288
>gi|334182404|ref|NP_001184943.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
gi|332190236|gb|AEE28357.1| DNA replication ATP-dependent helicase Dna2 [Arabidopsis thaliana]
Length = 1315
Score = 1494 bits (3868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/1378 (57%), Positives = 969/1378 (70%), Gaps = 104/1378 (7%)
Query: 1 MPQRKKANSSRKLQSSQP------QPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLI 54
MP RKK SS + Q QP+ FGIQ F RH QNS + + +P
Sbjct: 1 MPPRKKPKSSALKSNKQSSANHSSQPSTFGIQQLFLRHIQNSQSTSNSHTSTADP----- 55
Query: 55 HSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRF 114
V N + SD+A +P N PD +D + T SP+ISK
Sbjct: 56 --VDQQNVNGLA-----SDTAVLTPQNPLGT-SNEKPDESKDMDQQL--TEASPKISKNL 105
Query: 115 K-FSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQC 173
K FSP MLIK SQ D G E+TW ISPVNERL A +K +P + + + NS T
Sbjct: 106 KRFSPGMLIKQSQDDCGGEITWKISPVNERLRAAAKNIP-KMMDLTENSLGKQCPTSGIT 164
Query: 174 SHNKSKQPSPSPKAINR-SLTTGR--KRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPS 230
S + SPS KA R + T R +RVNP DA + N S SS SPF+TPPS
Sbjct: 165 SKVEQWLSSPSKKASKRPAFATNRVMERVNPSPDAEFE----IVNTS-SSGNSPFQTPPS 219
Query: 231 LSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWY 290
LS H+KL V C+GA +G
Sbjct: 220 LSCPHNKLPCTVTCSGACGSMG-------------------------------------- 241
Query: 291 IPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSV 350
HK+A LELLDQV+D I+VD + D + +++ K+ + +
Sbjct: 242 ---------AGQHKKALLELLDQVEDVIAVDDKTTDDVGIVMPQARVKDDI-ISSVVDCA 291
Query: 351 VNGVPTDPPENVNGTS-SCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHL 409
V+ P P+ N + +FLVLEVSEK + PYKVLRLL+E +G E A++L
Sbjct: 292 VDEGPVSLPKMQNSINPDSYFLVLEVSEKRGSGSSSKGQCPYKVLRLLDEHTGVECALYL 351
Query: 410 WEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSV 469
W++WF++ ++PGD++NVIGEFD GKCDV R+NNFLIVHPD LV+GTRVAASF CPRR+V
Sbjct: 352 WDEWFYSTVSPGDSINVIGEFDGDGKCDVDRQNNFLIVHPDTLVAGTRVAASFGCPRRTV 411
Query: 470 LDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNE 529
LDERL+ +E + ALLGTL HQ+FQAGL +E P++ L+EYA V++K+IESLYACGV+E
Sbjct: 412 LDERLRSNEHATVALLGTLQHQVFQAGLSQESPSVDGLQEYASTVIEKSIESLYACGVHE 471
Query: 530 NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWAPKY 588
D+ TL +AIPKMLNWI F+ S+D VDFGS G K +K+SEV DIEEM+WAPKY
Sbjct: 472 GDVRSTLFKAIPKMLNWIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEVIDIEEMSWAPKY 531
Query: 589 GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL 648
GLKGMIDAS+RV +ES N +N I+PLEFK+GK P+GQSS+EH AQVILYTLLMSERYL
Sbjct: 532 GLKGMIDASVRVIVESDMNTVNEKIMPLEFKSGKAPSGQSSIEHSAQVILYTLLMSERYL 591
Query: 649 KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR------ 702
KHID+GLLYYLQSDQTQG+ VQRSDLVGLI+RRNE ANDI+ ASTTQQLPPMLR
Sbjct: 592 KHIDNGLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLRNPNICR 651
Query: 703 -------------AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVV 749
A GGN E SGLG++FD+H+ HL+T H +FLRHWDRLIDLE +EMQ++
Sbjct: 652 NCRHLDVCTIYHKADGGNTESSGLGDVFDTHVSHLSTLHFNFLRHWDRLIDLEGREMQLL 711
Query: 750 KNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDG 807
+ +I GS G+H LSS+VLD +N +H S+++ RF+Y FVRQ +
Sbjct: 712 RKDIAHPHGSKGSHSASYLSSMVLDVTNGFQHHNSHKETRFIYRFVRQKSSESRERVTSE 771
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGR 867
D + + T D+DC LR+GD VIL TE L VA+G+I +ISR H+SVS SK LRLP
Sbjct: 772 DMIRTGNLATDDLDCKLRTGDRVILRTEVSHLTVANGIIADISRTHISVSLSKRLRLPWS 831
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSG 927
SS+ +L HE+WRI KDE MTSFSVMR+NL+QLF+Q+ + +R+MIVDLE PRFD+G
Sbjct: 832 EPSSEVSNLSHELWRIYKDEFMTSFSVMRFNLMQLFVQNGHN--IRKMIVDLEPPRFDNG 889
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
S+ SQDPA+SYIWSEKSLN+DQR+AI+K+LTAKDYALILGMPGTGKTSTMVHAVKALL+R
Sbjct: 890 SILSQDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIR 949
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
G+SILL SYTNSAVDNLLIKLK+Q I+F+RIGR E VH+E+++ C SAMN+ SVE+IKK+
Sbjct: 950 GSSILLASYTNSAVDNLLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMNMCSVEDIKKK 1009
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
LDQVKVVA TCLGI +PLL +++FDVCI+DEAGQ LPVS+GPL+FAS FVLVGDHYQLP
Sbjct: 1010 LDQVKVVASTCLGINSPLLVNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDHYQLP 1069
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
PLVQSTEARENGM ISLFRRLSE HPQAIS LQ+QYRMC+GIMELSNALIYGDRL CGS
Sbjct: 1070 PLVQSTEARENGMGISLFRRLSEAHPQAISVLQNQYRMCRGIMELSNALIYGDRLCCGSA 1129
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
E+A+A + +S SS SPWLK+ L P R V+FVNTDML A+EA+D +NNPVEA +IA+I
Sbjct: 1130 EVADATLVLSTSSSTSPWLKKVLEPTRTVVFVNTDMLRAFEARDQNAINNPVEASIIAEI 1189
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ELV N ++ KDIGIITPYNSQA+LI+H++ + VEIHTIDKYQGRDKDCILVSFVRS
Sbjct: 1190 VEELVNNGVDSKDIGIITPYNSQASLIQHAIPTTPVEIHTIDKYQGRDKDCILVSFVRSR 1249
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
E PR+ SSLLGDWHRINVALTRAKKKLIMVGS RTLS+VPLL LL+NKV EQSGILN
Sbjct: 1250 EKPRSSASSLLGDWHRINVALTRAKKKLIMVGSQRTLSRVPLLMLLLNKVKEQSGILN 1307
>gi|125549510|gb|EAY95332.1| hypothetical protein OsI_17160 [Oryza sativa Indica Group]
Length = 1269
Score = 1283 bits (3319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/1256 (54%), Positives = 865/1256 (68%), Gaps = 111/1256 (8%)
Query: 112 KRFKFSPEMLIKLSQYDGGDEV-TWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTI 170
KR +FSP MLIK SQ DGG EV TW ISPVN+RL V+ S ++ + +
Sbjct: 83 KRVRFSPGMLIKQSQDDGGGEVVTWKISPVNDRLRMVT-------------SRQMTGMAL 129
Query: 171 HQCSHNKSKQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPS 230
H CS+N+ S K + SL + + ++ G G V QSPFRTPPS
Sbjct: 130 HPCSNNEKHSSVESTKKWHSSLLGMSRCTASARNLDMCGTGPGGCDGVEDTQSPFRTPPS 189
Query: 231 LSYY--HDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFIST 288
LSY +L GV +G + LG
Sbjct: 190 LSYRCSEQQLNGGVVSDGGPEQLG------------------------------------ 213
Query: 289 WYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEAN 348
HK+A L+LLDQV+DAI ++ + +D E +
Sbjct: 214 -----------AGEHKKALLDLLDQVEDAI-MEEELPADGEN---------------KGE 246
Query: 349 SVVNGVP--------TDPPENVNGTSSC------HFLVLEVSEKNRPAD-PVDAKSPYKV 393
++NG P D +NV S FLVLEVSEK++ + P D + P KV
Sbjct: 247 QLINGDPKNISCSPIADSDQNVPSQKSLDAPPFDSFLVLEVSEKHKGDNLPCD-RYPVKV 305
Query: 394 LRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLV 453
LRLLNE G+E AVHL ++WFH++I+PGDTV+VIGEF DQG C + + N +IVHP++L+
Sbjct: 306 LRLLNEHGGKEHAVHLCDEWFHSLISPGDTVSVIGEFTDQGICIIDHDKNLVIVHPELLI 365
Query: 454 SGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARL 513
SGTRVA+SF CPRRSVLD+RLK +E S SAL+GTLLHQ+FQAGL++++P+ +FLE+ A+
Sbjct: 366 SGTRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDVPSTQFLEQQAKE 425
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS-DGLKKLK 572
VL KNIESLYACG +E++ KTL+EA+PK+LNW F N V+FG +G K +
Sbjct: 426 VLLKNIESLYACGASESNTLKTLIEAVPKILNWYKCFMKVSKCNN--VNFGQIEGQKTVG 483
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ EV DIEEMAWAP+YGLKG+IDASIR ++ + + ++PLEFKTGK +GQ+++EH
Sbjct: 484 VVEVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYD-RVMPLEFKTGKGTSGQTAVEH 542
Query: 633 RAQVILYTLLMSERYL-KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
AQVILYTLLM+ERYL K ID GLLYYL +DQT G+ V+RSDL+GLIMRRNE A +I+KA
Sbjct: 543 TAQVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIMRRNELATEILKA 602
Query: 692 STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN 751
S +Q PPM++A+GGN SGLG++FD+ + HLT AH +FL+HWDRLIDLEA+ QV K
Sbjct: 603 SISQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEARVSQVKKK 662
Query: 752 EIWCSRGSGGNHFTGCLSSIVLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
EI+ S S VLD +N H S + R++Y F+RQ + P G+
Sbjct: 663 EIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQKL-QPETADQPGEH 721
Query: 810 LIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNS 869
+ + +D +L+ GD V+LST+S R+AVA+G I ++SR H++VS + LRLPG NS
Sbjct: 722 V-------ESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVSLPRRLRLPGSNS 774
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV 929
+ L EVWRIDKDE ++SF+ MR NLVQLF ++ Q+S LR++IVDLEAPRFDSG +
Sbjct: 775 LLEQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPRFDSGGL 834
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
SQDPALSYI S +LN+DQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+LLMRG
Sbjct: 835 LSQDPALSYIQSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGE 894
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
SILLTSYTNSA+DNLL+KLK++ +DF+RIGRHE VH +++ HCLS +I SV+ +K R++
Sbjct: 895 SILLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEAVHPDVKGHCLSTTDIQSVDAVKARME 954
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
QV+VV VTCLGI +PLL KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPL
Sbjct: 955 QVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPL 1014
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
VQS+EARENGM +SLF RLSE HPQAISAL+ QYRM GIMELSN+LIYG+RLSCGS EI
Sbjct: 1015 VQSSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEI 1074
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
ANAK+K+S LKE LNP R V+F NTD +PA+EAK+H+T+NNP EA +++ IT
Sbjct: 1075 ANAKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALIVSWITN 1134
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
EL+K + +GIITPYN+QANLI+ + +SVE+HTIDKYQGRDK+CI+VSFVRS+ N
Sbjct: 1135 ELLKRGVAQDGVGIITPYNAQANLIQQHVD-ASVEVHTIDKYQGRDKECIIVSFVRSNGN 1193
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R SSLLGDWHRINV LTRAKKKLIMVGS TLS +PLL+L+I KV E+ G L+
Sbjct: 1194 SRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAERGGQLD 1249
Score = 40.4 bits (93), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 10 SRKLQSSQP-QPTKFGIQHFFDRHTQNSSKNV 40
S+K +SQP QP KFGI HFF+R +Q SS+N
Sbjct: 15 SKKPPASQPSQPAKFGILHFFERQSQASSQNA 46
>gi|357165528|ref|XP_003580414.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Brachypodium
distachyon]
Length = 1281
Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 672/1245 (53%), Positives = 863/1245 (69%), Gaps = 108/1245 (8%)
Query: 121 LIKLSQYDGGDEV-TWNISPVNERLLAV-SKQMPPENIRVLANSSRLNSLTIHQCSHNKS 178
LI+ SQ DGG EV +W SPVN+RL + S+QMP +R +NS + +SL + H+
Sbjct: 105 LIQQSQDDGGGEVVSWKFSPVNDRLRTITSRQMPGMALRPCSNSEKHSSLEAMKKWHS-- 162
Query: 179 KQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLSYY-HDK 237
SP ++R + R D NL G G + QSPFRTPPSL Y ++
Sbjct: 163 -----SPLGMSRCTASAR-------DPNLCGIGPSGCDGKQDFQSPFRTPPSLPYSCSEQ 210
Query: 238 LANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQR 297
L+ GV NG D LG
Sbjct: 211 LSAGVTSNGGPDQLG--------------------------------------------- 225
Query: 298 SFVCHHKQAFLELLDQVKDAIS-----VDASVSSDKEAYLSKSQDKNGAGMLLEANSVVN 352
V HK+A L+LLDQV+DAI+ VDA V+ + S D+N + ++ ++ +
Sbjct: 226 --VGQHKKALLDLLDQVEDAIAEEELPVDA-VNKGDQVTGGDSTDRNFSPIINSDPNLQS 282
Query: 353 GVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWED 412
P D P S +LVLEVSE ++ + P KVLRLLNE G+E VHL ++
Sbjct: 283 NKPLDAP------SFDSYLVLEVSENHKGDSSSCDRYPVKVLRLLNEHCGKEYTVHLRDE 336
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
WF T + PGDTV+VIGEF DQGKC + ++N +I+HP++L+SGTRVA+SF CPRRSVLD+
Sbjct: 337 WFRTTVGPGDTVSVIGEFGDQGKCIIDHDSNLVIIHPELLISGTRVASSFHCPRRSVLDD 396
Query: 473 RLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDI 532
R+K +E S SAL+GTLLHQIFQAGL++++P+ +FLE+ A+ VL KN+ESLYACG +E++
Sbjct: 397 RIKSTEHSTSALMGTLLHQIFQAGLLEDVPSRQFLEQQAKEVLLKNMESLYACGASESNT 456
Query: 533 HKTLVEAIPKMLNWIILF-KDSQDLNTPTVDFG-SDGLKKLKISEVTDIEEMAWAPKYGL 590
+ L+E IPKMLNW F K S+ N VDFG ++G K + ++EV DIEEMAWAP+YGL
Sbjct: 457 YSILIEGIPKMLNWFKCFMKGSKCTN---VDFGHTEGRKTVGVAEVMDIEEMAWAPRYGL 513
Query: 591 KGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL-K 649
KG++DAS+R ++ + + ++PLEFKTGK +GQ++MEH AQVILYTLLM+ERYL K
Sbjct: 514 KGIVDASVRSRVTCSGDSYD-RVMPLEFKTGKGTSGQTAMEHSAQVILYTLLMTERYLNK 572
Query: 650 HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKE 709
IDSGLLYYL +DQT G+ V+RSDL+GLIMRRN+ A++I+KAS +Q PPM++A+GG
Sbjct: 573 DIDSGLLYYLHTDQTLGIKVKRSDLIGLIMRRNDLASEILKASISQSFPPMIQAHGGTAA 632
Query: 710 CSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLS 769
SGLG++FD+ + HLT AH +FL+HWDRLIDLEA+ QV K EI+ S
Sbjct: 633 TSGLGDLFDNLVNHLTVAHHNFLKHWDRLIDLEARISQVKKKEIFLPHHSNTESKNSAPC 692
Query: 770 SIVLDASNEHQ--KSYRDNRFVYHFVRQHM-------PSPNLNASDGDSLIGAAIPTKDM 820
VLD NEH S + R++Y+FVRQ M P P + + +
Sbjct: 693 YFVLDVKNEHSIDSSGKSKRYIYNFVRQKMQPETAGQPEPQVES---------------L 737
Query: 821 DCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV 880
D TL+SGD V+LST+S R+AVA+G I +ISR H++VS S+ LRLPG +S + L E+
Sbjct: 738 DFTLKSGDCVVLSTQSGRIAVATGSIRDISRSHITVSLSRRLRLPGSSSLLEQGDLQREL 797
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
WRIDKDE +SF+ MR NL+QLF Q+ Q+S++R+++VDLEAPRFDSG + SQDPALSY+
Sbjct: 798 WRIDKDEFSSSFATMRLNLIQLFAQNPQNSKIRKLVVDLEAPRFDSGGLLSQDPALSYLR 857
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
S SLNDDQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+ L RG SILLTSYTNSA
Sbjct: 858 SLTSLNDDQQRSLQKILAAKDYALILGMPGTGKTYTMVHAVKSFLRRGESILLTSYTNSA 917
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
+DNLL+KLKS+ +DF+RIGRHE VH +++ HCLS ++SV+ IK R++QV+VV VTCLG
Sbjct: 918 IDNLLMKLKSEGVDFIRIGRHEAVHPDVRAHCLSTTEVHSVDAIKTRMEQVQVVGVTCLG 977
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
+ +PLL KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPLVQS EARENGM
Sbjct: 978 VYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPLVQSLEARENGM 1037
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
+SLF RLSE HPQAISAL+ QYRM GIMELSN+LIYG+RLSCGS EIAN+K+K S
Sbjct: 1038 GVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEIANSKLKFSGKG 1097
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
LKE LNP R VIF NTD +PA EAK+H+ +NNP EA +++ IT++L+K + +
Sbjct: 1098 PVHLKLKEILNPDRAVIFANTDQVPALEAKEHRIVNNPTEAYIVSWITKQLLKRGVSQDE 1157
Query: 1241 IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
IGIITPYN+QANLIR + S VE+HTIDKYQGRDK+CI+VSFVRSS + R SSLLGD
Sbjct: 1158 IGIITPYNAQANLIRQHVD-SLVEVHTIDKYQGRDKECIIVSFVRSSGDSRASGSSLLGD 1216
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
WHRINV LTRAKKKLIMVGS TLS +PLL+LL+ +V + G+L+
Sbjct: 1217 WHRINVVLTRAKKKLIMVGSAGTLSSIPLLRLLVEQVAKCGGLLD 1261
>gi|297603268|ref|NP_001053694.2| Os04g0588200 [Oryza sativa Japonica Group]
gi|32488773|emb|CAE04326.1| OSJNBb0016D16.17 [Oryza sativa Japonica Group]
gi|255675733|dbj|BAF15608.2| Os04g0588200 [Oryza sativa Japonica Group]
Length = 1287
Score = 1268 bits (3280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/1254 (53%), Positives = 859/1254 (68%), Gaps = 111/1254 (8%)
Query: 114 FKFSPEMLIKLSQYDGGDEV-TWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQ 172
F F LIK SQ DGG EV TW ISPVN+RL V+ S ++ + +H
Sbjct: 103 FLFGAVQLIKQSQDDGGGEVVTWKISPVNDRLRMVT-------------SRQMTGMALHP 149
Query: 173 CSHNKSKQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLS 232
CS+N+ S K + SL + + ++ G G V QSPFRTPPSLS
Sbjct: 150 CSNNEKHSSVESTKKWHSSLLGMSRCTASARNLDMCGTGPGGCDGVEDTQSPFRTPPSLS 209
Query: 233 YY--HDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWY 290
Y +L GV +G + LG
Sbjct: 210 YRCSEQQLNGGVVSDGGPEQLG-------------------------------------- 231
Query: 291 IPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSV 350
HK+A L+LLDQV+DAI ++ + +D E + +
Sbjct: 232 ---------AGEHKKALLDLLDQVEDAI-MEEELPADGEN---------------KGEQL 266
Query: 351 VNGVP--------TDPPENVNGTSSC------HFLVLEVSEKNRPAD-PVDAKSPYKVLR 395
+NG P D +NV S FLVLEVSEK++ + P D + P KVLR
Sbjct: 267 INGDPKNISCSPIADSDQNVPSQKSLDAPPFDSFLVLEVSEKHKGDNLPCD-RYPVKVLR 325
Query: 396 LLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSG 455
LLNE G+E AVHL ++WFH++I+PGDTV+VIGEF D G C + + N +IVHP++L+SG
Sbjct: 326 LLNEHGGKEHAVHLCDEWFHSLISPGDTVSVIGEFTDHGICIIDHDKNLVIVHPELLISG 385
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
TRVA+SF CPRRSVLD+RLK +E S SAL+GTLLHQ+FQAGL++++P+ +FLE+ A+ VL
Sbjct: 386 TRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDVPSTQFLEQQAKEVL 445
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS-DGLKKLKIS 574
KNIESLYACG +E++ KTL+EA+PK+LNW F N V+FG +G K + +
Sbjct: 446 LKNIESLYACGASESNTLKTLIEAVPKILNWYKCFMKVSKCNN--VNFGQIEGQKTVGVV 503
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
EV DIEEMAWAP+YGLKG+IDASIR ++ + + ++PLEFKTGK +GQ+++EH A
Sbjct: 504 EVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYD-RVMPLEFKTGKGTSGQTAVEHTA 562
Query: 635 QVILYTLLMSERYL-KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAST 693
QVILYTLLM+ERYL K ID GLLYYL +DQT G+ V+RSDL+GLIMRRNE A +I+KAS
Sbjct: 563 QVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIMRRNELATEILKASI 622
Query: 694 TQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEI 753
+Q PPM++A+GGN SGLG++FD+ + HLT AH +FL+HWDRLIDLEA+ QV K EI
Sbjct: 623 SQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEARVSQVKKKEI 682
Query: 754 WCSRGSGGNHFTGCLSSIVLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
+ S S VLD +N H S + R++Y F+RQ + P G+ +
Sbjct: 683 FQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQKL-QPETADQPGEHV- 740
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
+ +D +L+ GD V+LST+S R+AVA+G I ++SR H++VS + LRLPG NS
Sbjct: 741 ------ESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVSLPRRLRLPGSNSLL 794
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFS 931
+ L EVWRIDKDE ++SF+ MR NLVQLF ++ Q+S LR++IVDLEAPRFDSG + S
Sbjct: 795 EQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPRFDSGGLLS 854
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
QDPALSYI S +LN+DQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+LLMRG SI
Sbjct: 855 QDPALSYIQSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGESI 914
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQV 1051
LLTSYTNSA+DNLL+KLK++ +DF+RIGRHE VH +++ HCLS +I SV+ +K R++QV
Sbjct: 915 LLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEAVHPDVKGHCLSTTDIQSVDAVKARMEQV 974
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
+VV VTCLGI +PLL KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPLVQ
Sbjct: 975 QVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPLVQ 1034
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
S+EARENGM +SLF RLSE HPQAISAL+ QYRM GIMELSN+LIYG+RLSCGS EIAN
Sbjct: 1035 SSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEIAN 1094
Query: 1172 AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
AK+K+S LKE LNP R V+F NTD +PA+EAK+H+T+NNP EA +++ IT EL
Sbjct: 1095 AKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALIVSWITNEL 1154
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+K + +GIITPYN+QANLI+ + +SVE+HTIDKYQGRDK+CI+VSFVRS+ N R
Sbjct: 1155 LKRGVAQDGVGIITPYNAQANLIQQHVD-ASVEVHTIDKYQGRDKECIIVSFVRSNGNTR 1213
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
SSLLGDWHRINV LTRAKKKLIMVGS TLS +PLL+L+I KV E+ G L+
Sbjct: 1214 ASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAERGGQLD 1267
>gi|125591443|gb|EAZ31793.1| hypothetical protein OsJ_15947 [Oryza sativa Japonica Group]
Length = 1249
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 665/1256 (52%), Positives = 843/1256 (67%), Gaps = 136/1256 (10%)
Query: 112 KRFKFSPEMLIKLSQYDGGDEV-TWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTI 170
KR +FSP MLIK SQ DGG EV TW ISPVN+RL V+ S ++ + +
Sbjct: 88 KRVRFSPGMLIKQSQDDGGGEVVTWKISPVNDRLRMVT-------------SRQMTGMAL 134
Query: 171 HQCSHNKSKQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPS 230
H CS+N+ S K + SL + + ++ G G V QSPFRTPPS
Sbjct: 135 HPCSNNEKHSSVESTKKWHSSLLGMSRCTASARNLDMCGTGPGGCDGVEDTQSPFRTPPS 194
Query: 231 LSYY--HDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFIST 288
LSY +L GV +G + LG
Sbjct: 195 LSYRCSEQQLNGGVVSDGGPEQLG------------------------------------ 218
Query: 289 WYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEAN 348
HK+A L+LLDQV+DAI ++ + +D E +
Sbjct: 219 -----------AGEHKKALLDLLDQVEDAI-MEEELPADGEN---------------KGE 251
Query: 349 SVVNGVP--------TDPPENVNGTSSC------HFLVLEVSEKNRPAD-PVDAKSPYKV 393
++NG P D +NV S FLVLEVSEK++ + P D + P KV
Sbjct: 252 QLINGDPKNISCSPIADSDQNVPSQKSLDAPPFDSFLVLEVSEKHKGDNLPCD-RYPVKV 310
Query: 394 LRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLV 453
LRLLNE G+E AVHL ++WFH++I+PGDTV+VIGEF D G C + + N +IVHP++L+
Sbjct: 311 LRLLNEHGGKEHAVHLCDEWFHSLISPGDTVSVIGEFTDHGICIIDHDKNLVIVHPELLI 370
Query: 454 SGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARL 513
SGTRVA+SF CPRRSVLD+RLK +E S SAL+GTLLHQ+FQAGL++++P+ +FLE+ A+
Sbjct: 371 SGTRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDVPSTQFLEQQAKE 430
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS-DGLKKLK 572
VL KNIESLYACG +E++ KTL+EA+PK+LNW F N V+FG +G K +
Sbjct: 431 VLLKNIESLYACGASESNTLKTLIEAVPKILNWYKCFMKVSKCNN--VNFGQIEGQKTVG 488
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ EV DIEEMAWAP+YGLKG+IDASIR ++ + + ++PLEFKTGK +GQ+++EH
Sbjct: 489 VVEVMDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYD-RVMPLEFKTGKGTSGQTAVEH 547
Query: 633 RAQVILYTLLMSERYL-KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
AQVILYTLLM+ERYL K ID GLLYYL +DQT G+ V+RSDL+GLIMRRNE A +I+KA
Sbjct: 548 TAQVILYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIMRRNELATEILKA 607
Query: 692 STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN 751
S +Q PPM++A+GGN SGLG++FD+ + HLT AH +FL+HWDRLIDLEA+ QV K
Sbjct: 608 SISQSFPPMIQAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDRLIDLEARVSQVKKK 667
Query: 752 EIWCSRGSGGNHFTGCLSSIVLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
EI+ S S VLD +N H S + R++Y F+RQ + P G+
Sbjct: 668 EIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQKL-QPETADQPGEH 726
Query: 810 LIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNS 869
+ + +D +L+ GD V VS + LRLPG NS
Sbjct: 727 V-------ESVDFSLKCGDSV-------------------------VSLPRRLRLPGSNS 754
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV 929
+ L EVWRIDKDE ++SF+ MR NLVQLF ++ Q+S LR++IVDLEAPRFDSG +
Sbjct: 755 LLEQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPRFDSGGL 814
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
SQDPALSYI S +LN+DQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+LLMRG
Sbjct: 815 LSQDPALSYIQSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKSLLMRGE 874
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
SILLTSYTNSA+DNLL+KLK++ +DF+RIGRHE VH +++ HCLS +I SV+ +K R++
Sbjct: 875 SILLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEAVHPDVKGHCLSTTDIQSVDAVKARME 934
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
QV+VV VTCLGI +PLL KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPL
Sbjct: 935 QVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPL 994
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
VQS+EARENGM +SLF RLSE HPQAISAL+ QYRM GIMELSN+LIYG+RLSCGS EI
Sbjct: 995 VQSSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLSCGSLEI 1054
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
ANAK+K+S LKE LNP R V+F NTD +PA+EAK+H+T+NNP EA +++ IT
Sbjct: 1055 ANAKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALIVSWITN 1114
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
EL+K + +GIITPYN+QANLI+ + +SVE+HTIDKYQGRDK+CI+VSFVRS+ N
Sbjct: 1115 ELLKRGVAQDGVGIITPYNAQANLIQQHVD-ASVEVHTIDKYQGRDKECIIVSFVRSNGN 1173
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R SSLLGDWHRINV LTRAKKKLIMVGS TLS +PLL+L+I KV E+ G L+
Sbjct: 1174 TRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAERGGQLD 1229
Score = 40.4 bits (93), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 10 SRKLQSSQP-QPTKFGIQHFFDRHTQNSSKNV 40
S+K +SQP QP KFGI HFF+R +Q SS+N
Sbjct: 15 SKKPPASQPSQPAKFGILHFFERQSQASSQNA 46
>gi|414585704|tpg|DAA36275.1| TPA: hypothetical protein ZEAMMB73_302708 [Zea mays]
Length = 1257
Score = 1224 bits (3168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 697/1361 (51%), Positives = 886/1361 (65%), Gaps = 161/1361 (11%)
Query: 14 QSSQP-QPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRNPS 72
Q SQP QP KFGI HFF+R TQ S QN + P PP + PS
Sbjct: 17 QPSQPSQPAKFGILHFFERQTQAS----------QNAKRQKPDPPAPPPPPPPPPEKEPS 66
Query: 73 DSAP--SKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRFKFSPEMLIKLSQYDGG 130
+ +P +K +P KR +FSP MLIK SQ DG
Sbjct: 67 EVSPEVTKTLAP-----------------------------KRVRFSPGMLIKQSQDDGV 97
Query: 131 DEV-TWNISPVNERLLAV-SKQ---MPPENIRVLANSSRLNSLTIHQCSHNKSKQPSPSP 185
EV TW ISPVN RL SKQ M P NSS L+++ K+ SP
Sbjct: 98 AEVVTWKISPVNHRLGTTKSKQFLGMAPHPYSSEKNSS-LDAM----------KKWHSSP 146
Query: 186 KAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLSY--YHDKLANGVA 243
++R T G ++ + G+ V QSPFRTPPSLSY ++++GV
Sbjct: 147 LGLSRCTTLG-------SNSGVLGSAIVGCDGVGDTQSPFRTPPSLSYGCNEQQVSSGVT 199
Query: 244 CNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNLQRSFVCHH 303
G ++ G H
Sbjct: 200 SEGGAEPSG-----------------------------------------------AGQH 212
Query: 304 KQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSVVNGVPTD------ 357
K+A L+LLDQV+DAI ++ + +D ++ +++ + NS TD
Sbjct: 213 KKALLDLLDQVEDAI-MEEELPADPGNKGGQTTNED-----ITNNSRSPVADTDLTIPSK 266
Query: 358 -----PPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWED 412
PP N FLVLEVSEK++ D + P KVLRLLNE SG E AVHL ++
Sbjct: 267 KTIHVPPFN-------SFLVLEVSEKHKADDSSCDRYPVKVLRLLNEHSGTECAVHLCDE 319
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
WF +++ PGDTVNVIGEF + GKC V +NN +IVHP+ L+SGTR A+SF C RRSVLDE
Sbjct: 320 WFDSIVGPGDTVNVIGEFSNHGKCIVDHDNNLVIVHPEQLISGTRAASSFQCLRRSVLDE 379
Query: 473 RLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDI 532
RLK +E S SAL GTLLHQ+FQAGL+ + P+ +FLE+ A+ VL KNIE+LYACGVNE+++
Sbjct: 380 RLKSNEYSTSALTGTLLHQVFQAGLLNDAPSWQFLEQQAKEVLLKNIETLYACGVNESNM 439
Query: 533 HKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK-LKISEVTDIEEMAWAPKYGLK 591
+ TL+EAIPKMLNW F + VDFG + ++K + ++EV DIEEMAWAP+YG+K
Sbjct: 440 YSTLIEAIPKMLNWFKCFLKGSKCSD--VDFGHNEVRKTVGVTEVMDIEEMAWAPRYGMK 497
Query: 592 GMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL-KH 650
G+IDAS+R ++ES I+PLEFKTGK +GQ++MEH AQV+LYTLLM+ERYL +
Sbjct: 498 GVIDASVRSRVESHNGGSYDRIMPLEFKTGKATSGQAAMEHSAQVMLYTLLMTERYLNED 557
Query: 651 IDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKEC 710
ID GLLYYL +DQT G+ V+R+DL+GLIMRRNE A +I+KAS +Q PPML+A+GG+
Sbjct: 558 IDLGLLYYLHTDQTLGIKVKRTDLIGLIMRRNELATEILKASMSQSFPPMLQAHGGSGTT 617
Query: 711 SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW---CSRGSGGNHFTGC 767
SGLG++FD+ + HLT H +FL+HWDRLIDLEA+ QV KN + + GSG +
Sbjct: 618 SGLGDLFDNLVNHLTVTHHNFLKHWDRLIDLEARASQVKKNILQPHNSNYGSG----SSA 673
Query: 768 LSSIVLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
+ VLD N H S + R++Y+FV+Q M + D +D +L+
Sbjct: 674 VPYFVLDIKNGHSIDSSGKSKRYIYNFVQQKMQPETADQLDAQ--------FDSIDFSLK 725
Query: 826 SGDYVILSTESDRLAVASGLITEI-SRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
GD+V+LST+S R+AVA+G I EI S H++VS + LR+P NS S+ + L E+WRID
Sbjct: 726 VGDFVVLSTQSGRIAVANGCIREIISHSHITVSLPRRLRIPDSNSLSEQEDLTREIWRID 785
Query: 885 KDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS 944
KDE +SF +MR N+VQLF Q+ Q+S LR++IVDLEAPRFDSG +FSQDPALSYI S +
Sbjct: 786 KDEFSSSFGIMRLNIVQLFAQNPQNSHLRKLIVDLEAPRFDSGGLFSQDPALSYIRSLPN 845
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+DQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+LL+RG SILLTSYTNSA+D L
Sbjct: 846 LNNDQQRSLHKILGAKDYALILGMPGTGKTYTMVHAVKSLLIRGESILLTSYTNSAIDTL 905
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+KLK++ +DF+RIGR E VH +++ HCLS SV+ IK R++QV+VV VTCLG+ +P
Sbjct: 906 LMKLKTEGVDFIRIGRPEAVHPDVRAHCLSTTEAQSVDAIKARMEQVQVVGVTCLGMYHP 965
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
LL KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPLVQS+EARENGM ISL
Sbjct: 966 LLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPLVQSSEARENGMGISL 1025
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RLSE H QAISAL+ QYRM GIMELSN+LIYG+RL CGS EIANAK+K S
Sbjct: 1026 FWRLSEAHSQAISALRCQYRMSSGIMELSNSLIYGNRLCCGSLEIANAKLKFSGREPMQL 1085
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
LKE LNP R VIF NTD +PA EAK+H+T+NNP EA +I+ I +EL++ + IGII
Sbjct: 1086 KLKEILNPDRAVIFANTDQIPALEAKEHRTVNNPTEAHIISWIIKELLRRGVAQDAIGII 1145
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
TPYN+Q N+I+ + VE+HTIDKYQGRDK+CI+VSFVRS+ N R SSLLGDWHRI
Sbjct: 1146 TPYNAQVNIIQQ-YTDCLVEVHTIDKYQGRDKECIIVSFVRSTANSRASGSSLLGDWHRI 1204
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
NV LTRAKKKLIMVGS TLS +PLL+LL++KV E G+L+
Sbjct: 1205 NVLLTRAKKKLIMVGSRGTLSTIPLLRLLVDKVAEIGGLLD 1245
>gi|242074142|ref|XP_002447007.1| hypothetical protein SORBIDRAFT_06g026800 [Sorghum bicolor]
gi|241938190|gb|EES11335.1| hypothetical protein SORBIDRAFT_06g026800 [Sorghum bicolor]
Length = 1147
Score = 1206 bits (3120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/1238 (53%), Positives = 828/1238 (66%), Gaps = 115/1238 (9%)
Query: 120 MLIKLSQYDGGDEV-TWNISPVNERL-LAVSKQMPPENIRVLANSSRLNSLTIHQCSHNK 177
MLIK SQ DG EV TW ISPVN R A SKQ L + S + S
Sbjct: 1 MLIKQSQDDGAAEVVTWKISPVNHRFGTAKSKQF-------LGMTPHPYSSEVKNSSLEA 53
Query: 178 SKQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPPSLSY--YH 235
K+ SP ++R T GR ++ + G+ V QSPFRTPPSLSY
Sbjct: 54 MKKWHSSPLGLSRCNTLGR-------NSGVLGSALVGCDGVEDTQSPFRTPPSLSYGCNE 106
Query: 236 DKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTWYIPYNL 295
+L++GV G + LG
Sbjct: 107 QQLSSGVTFEGGLEPLG------------------------------------------- 123
Query: 296 QRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSVVNGVP 355
HK+A L+LLDQV+DAI ++ + D ++ +K+ + V +G
Sbjct: 124 ----AGQHKKALLDLLDQVEDAI-MEEELPVDPGNKGGQATNKDNTNN--SCSPVADGDL 176
Query: 356 TDP-PENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWF 414
T P + +N FLVLEVSEK++ D + P K+LRLLNE SG+E AVHL ++WF
Sbjct: 177 TIPSKKTINAPPFNSFLVLEVSEKHKADDSSCDRYPVKILRLLNEHSGKECAVHLCDEWF 236
Query: 415 HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL 474
H+++ PGDTVNVIGEF DQGKC V +NN +IVHP++L+SGTRVA+SF CPRRSVLD+RL
Sbjct: 237 HSIVGPGDTVNVIGEFSDQGKCTVDHDNNLVIVHPELLISGTRVASSFHCPRRSVLDDRL 296
Query: 475 KCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHK 534
K +E S SAL G LLHQ+FQAGL+K+ P+ +FLE+ A+ VL KNIE+LYACG NE++++
Sbjct: 297 KGNEYSTSALTGILLHQVFQAGLLKDAPSRQFLEQEAKEVLLKNIETLYACGANESNMYS 356
Query: 535 TLVEAIPKMLNWIILF-KDSQDLNTPTVDFG-SDGLKKLKISEVTDIEEMAWAPKYGLKG 592
TL+EAIPKMLNW F K S+ N VDFG ++G K + ++EV DIEEMAWAP+YGLKG
Sbjct: 357 TLIEAIPKMLNWYKCFLKGSKCSN---VDFGHNEGRKTVGVTEVMDIEEMAWAPRYGLKG 413
Query: 593 MIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL-KHI 651
+IDAS+R ++ES I+PLEFKTGK +GQ++MEH AQVILYTLLM+ERYL + I
Sbjct: 414 VIDASVRSRVESGNGGSYDRIMPLEFKTGKGTSGQTAMEHSAQVILYTLLMTERYLNEDI 473
Query: 652 DSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKECS 711
D GLLYYL +DQT G+ V+R+DL+GLIMRRNE A +I+KAS +Q PPML+A+GGN S
Sbjct: 474 DLGLLYYLHTDQTLGIKVKRADLIGLIMRRNELATEILKASISQSFPPMLQAHGGNATTS 533
Query: 712 GLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSI 771
GLG++FD+ + HLT AH SFL+HWDRLIDLEA+ QV K I+ S +
Sbjct: 534 GLGDLFDNLVNHLTVAHHSFLKHWDRLIDLEARVSQVKKKNIFQPHNSNSRSGNSAVPYF 593
Query: 772 VLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDG--DSLIGAAIPTKDMDCTLRSG 827
VLD N H S + R++Y+FV+Q M S + D DSL D +L+ G
Sbjct: 594 VLDIKNGHSIDSSGKSTRYIYNFVQQKMQSETADQLDTQFDSL----------DFSLKIG 643
Query: 828 DYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDE 887
D V VS + LR+P NS S+ L E+WRIDKDE
Sbjct: 644 DPV-------------------------VSLPRRLRIPDSNSLSERQDLTREIWRIDKDE 678
Query: 888 IMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLND 947
+SF++MR NLVQLF Q+ Q++QLR++IVDLEAPRFDSG +FSQDPAL YI S +LN
Sbjct: 679 FSSSFAIMRLNLVQLFAQNPQNTQLRKLIVDLEAPRFDSGGLFSQDPALPYIRSLPNLNG 738
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
DQ+R++ K+L AKDYALILGMPGTGKT TMVHAVK+LL+RG SILLTSYTNSA+D LL+K
Sbjct: 739 DQQRSLHKILGAKDYALILGMPGTGKTYTMVHAVKSLLIRGESILLTSYTNSAIDTLLMK 798
Query: 1008 LKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
LK++ +DF+RIGR + VH +++ HCLS SV+ IK R++QV+VV VTCLG+ +PLL
Sbjct: 799 LKTEGVDFIRIGRPDSVHPDVRAHCLSTTEAQSVDAIKARMEQVQVVGVTCLGMYHPLLA 858
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
KKFD CIMDEAGQ TLPVSLGPLM A+KFVLVGDHYQLPPLVQS+EARENGM ISLF R
Sbjct: 859 HKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDHYQLPPLVQSSEARENGMGISLFWR 918
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
LSE HPQAISAL+ QYRM GIMELSN+LIY +RL CGS EIANAK+K S L+
Sbjct: 919 LSEAHPQAISALRCQYRMSSGIMELSNSLIYDNRLCCGSSEIANAKLKFSHREPVHFKLE 978
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
E LNP + VIF NTD +PA EAK+H+T+NNP EA +I+ I +EL++ + IGIITPY
Sbjct: 979 EILNPDKAVIFANTDQIPALEAKEHRTVNNPTEAHIISWIIKELLRRGVAQDAIGIITPY 1038
Query: 1248 NSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
N+Q N+I+ VE+HTIDKYQGRDK+CI+VSFVRS+ N R SSLLGDWHRINV
Sbjct: 1039 NAQVNIIQQCTD-GLVEVHTIDKYQGRDKECIIVSFVRSTANSRASGSSLLGDWHRINVL 1097
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LTRAKKKLIMVGS TLS +PLL+LL++KV E G+L+
Sbjct: 1098 LTRAKKKLIMVGSRGTLSTIPLLRLLVDKVAEIGGLLD 1135
>gi|7485995|pir||T00740 hypothetical protein F22O13.35 - Arabidopsis thaliana
Length = 814
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/813 (66%), Positives = 641/813 (78%), Gaps = 45/813 (5%)
Query: 527 VNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWA 585
V+E D+ TL +AIPKMLNWI F+ S+D VDFGS G K +K+SEV DIEEM+WA
Sbjct: 5 VHEGDVRSTLFKAIPKMLNWIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEVIDIEEMSWA 64
Query: 586 PKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSE 645
PKYGLKGMIDAS+RV +ES N +N I+PLEFK+GK P+GQSS+EH AQVILYTLLMSE
Sbjct: 65 PKYGLKGMIDASVRVIVESDMNTVNEKIMPLEFKSGKAPSGQSSIEHSAQVILYTLLMSE 124
Query: 646 RYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG 705
RYLKHID+GLLYYLQSDQTQG+ VQRSDLVGLI+RRNE ANDI+ ASTTQQLPPMLRA G
Sbjct: 125 RYLKHIDNGLLYYLQSDQTQGISVQRSDLVGLIIRRNELANDILVASTTQQLPPMLRADG 184
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFT 765
GN E SGLG++FD+H+ HL+T H +FLRHWDRLIDLE +EMQ+++ +I GS G+H
Sbjct: 185 GNTESSGLGDVFDTHVSHLSTLHFNFLRHWDRLIDLEGREMQLLRKDIAHPHGSKGSHSA 244
Query: 766 GCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT 823
LSS+VLD +N +H S+++ RF+Y FVRQ + D + + T D+DC
Sbjct: 245 SYLSSMVLDVTNGFQHHNSHKETRFIYRFVRQKSSESRERVTSEDMIRTGNLATDDLDCK 304
Query: 824 LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRI 883
LR+GD VIL TE L VA+G+I +ISR H+SVS SK LRLP SS+ +L HE+WRI
Sbjct: 305 LRTGDRVILRTEVSHLTVANGIIADISRTHISVSLSKRLRLPWSEPSSEVSNLSHELWRI 364
Query: 884 DKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
KDE MTSFSVMR+NL+QLF+Q+ + +R+MIVDLE PRFD+GS+ SQDPA+SYIWSEK
Sbjct: 365 YKDEFMTSFSVMRFNLMQLFVQNGHN--IRKMIVDLEPPRFDNGSILSQDPAISYIWSEK 422
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+DQR+AI+K+LTAKDYALILGMPGTGKTSTMVHAVKALL+RG+SILL SYTNSAVDN
Sbjct: 423 SLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLASYTNSAVDN 482
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN 1063
LLIKLK+Q I+F+RIGR E VH+E+++ C SAMN+ SVE+IKK+LDQVKVVA TCLGI +
Sbjct: 483 LLIKLKAQGIEFLRIGRDEAVHEEVRESCFSAMNMCSVEDIKKKLDQVKVVASTCLGINS 542
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
PLL +++FDVCI+DEAGQ LPVS+GPL+FAS FVLVGDHYQLPPLVQSTEARENGM IS
Sbjct: 543 PLLVNRRFDVCIIDEAGQIALPVSIGPLLFASTFVLVGDHYQLPPLVQSTEARENGMGIS 602
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
LFRRLSE HPQAIS LQ+QYRMC+GIMELSNALIYGDRL CGS E+A+A + +S SS S
Sbjct: 603 LFRRLSEAHPQAISVLQNQYRMCRGIMELSNALIYGDRLCCGSAEVADATLVLSTSSSTS 662
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
PWLK KI +ELV N ++ KDIGI
Sbjct: 663 PWLK--------------------------------------KIVEELVNNGVDSKDIGI 684
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPYNSQA+LI+H++ + VEIHTIDKYQGRDKDCILVSFVRS E PR+ SSLLGDWHR
Sbjct: 685 ITPYNSQASLIQHAIPTTPVEIHTIDKYQGRDKDCILVSFVRSREKPRSSASSLLGDWHR 744
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
INVALTRA KLIMVGS RTLS+VPLL LL+NK
Sbjct: 745 INVALTRA--KLIMVGSQRTLSRVPLLMLLLNK 775
>gi|255571129|ref|XP_002526515.1| DNA replication helicase dna2, putative [Ricinus communis]
gi|223534190|gb|EEF35906.1| DNA replication helicase dna2, putative [Ricinus communis]
Length = 1018
Score = 1068 bits (2763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/1099 (55%), Positives = 719/1099 (65%), Gaps = 176/1099 (16%)
Query: 16 SQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSPNCPPFSVYRN---PS 72
+Q QP+K+GIQHFF R TQ S QNP S+ N P S R P+
Sbjct: 26 NQQQPSKYGIQHFFQRQTQVS----------QNPKGT---PTSNGNVKPDSATRASVFPN 72
Query: 73 DSAPSKKNSPQS--ALENTPPDNILPIDDETNSTHHSPEISK-------RFKFSPEML-- 121
P + P S AL NT + N + SPEISK RFKFSP ML
Sbjct: 73 PKPPITIDGPSSPIALPNTR-------NHRDNPDYISPEISKSLPLDLCRFKFSPGMLLI 125
Query: 122 ---------IKLSQYDGGDEVTWNISPVNERLLAVS---KQMPPENIRVLANSSRLNSLT 169
IK SQ DGGDE+TW ISPVN+RL A S K P I+ +A ++RL +L+
Sbjct: 126 YGYRGLSQLIKQSQDDGGDEITWKISPVNQRLEATSLDKKVSSPTQIQEVA-ANRL-ALS 183
Query: 170 IHQCSHNKSKQPSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRTPP 229
Q +K +P +PFRTPP
Sbjct: 184 TFQ---DKPSHATP--------------------------------------HTPFRTPP 202
Query: 230 SLSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFISTW 289
SLSY H LAN CNG VLL T+R
Sbjct: 203 SLSYSHHSLANDAECNG------------VLLD-----------------QPTLR----- 228
Query: 290 YIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANS 349
HK+A LELLDQV+D I V+ S SS A S+ + +N M + +
Sbjct: 229 ------------QHKKALLELLDQVEDVICVEDSESSANTALSSQLRYENANQMPPKLDP 276
Query: 350 VVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHL 409
V+ P+ T HFLVLEVSEK RPADP A SPYKVLRLLNEQ+GEER+V L
Sbjct: 277 VLQREAPASPKIF--TMDHHFLVLEVSEKYRPADPFGASSPYKVLRLLNEQNGEERSVCL 334
Query: 410 WEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSV 469
E+W+++VIAPGDTVNVIGEFDDQG+CDV +NN LIVHP +LVSGTRVAASFSCPRR+V
Sbjct: 335 LEEWYYSVIAPGDTVNVIGEFDDQGRCDVDHDNNLLIVHPHILVSGTRVAASFSCPRRTV 394
Query: 470 LDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNE 529
LDER+KC E S +AL+GT+LHQIFQAGLM E PT+ FLE Y R VLQKNIESLYACGV E
Sbjct: 395 LDERIKCHEHSEAALIGTMLHQIFQAGLMNESPTINFLEGYMRTVLQKNIESLYACGVTE 454
Query: 530 NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWAPKY 588
ND+ KTL+EAIPK+L+WI+LFK QD V+FGSD GL+KLKISEV DIEEMAWAPKY
Sbjct: 455 NDMLKTLIEAIPKILDWIVLFK--QDSKAAIVNFGSDDGLQKLKISEVIDIEEMAWAPKY 512
Query: 589 GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM------------------ 630
GLKG+IDASIRVK+ES NE + I+PLEFKTGK+PNGQ+S+
Sbjct: 513 GLKGIIDASIRVKVESNGNETDEKIVPLEFKTGKVPNGQASLWPLLKMYWRIAEHFDKNA 572
Query: 631 --------EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRN 682
EHRAQVILYTLLMSERYLKHIDSG+LYYL+SDQTQG+MV+RSD+VGLIMRRN
Sbjct: 573 SINLLSSTEHRAQVILYTLLMSERYLKHIDSGVLYYLRSDQTQGIMVRRSDVVGLIMRRN 632
Query: 683 EFANDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
E AND +KAS QQLPPML+AYGG+ E SGLG++FDSH+ H+T +HC F RHWDRLIDLE
Sbjct: 633 ELANDFLKASQIQQLPPMLQAYGGSTESSGLGDVFDSHVDHITPSHCVFFRHWDRLIDLE 692
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSP 800
KE Q+VK+EIW S +H T LSSIVLD SN HQKS DNRF+Y FV + + S
Sbjct: 693 GKETQLVKDEIWRSHRMKSDHSTSFLSSIVLDPSNGLSHQKSLNDNRFIYRFVPRKLASR 752
Query: 801 NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSK 860
N+ AS+ DS ++ P D +CTL+ GDYVILSTES VASG++T+IS FHVSVSFSK
Sbjct: 753 NVYASNEDSCAPSS-PMNDFNCTLKIGDYVILSTESGHQTVASGVLTDISHFHVSVSFSK 811
Query: 861 PLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLE 920
LRLPG NS S+ + LL EVWRIDKDE MTSFSVMR+NL QLFLQS Q SQLR+MIVDLE
Sbjct: 812 HLRLPGSNSFSEVNDLLQEVWRIDKDEAMTSFSVMRFNLAQLFLQSEQGSQLRKMIVDLE 871
Query: 921 APRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
APRFDSG +FSQDPA+SY+WS KSLN DQRRAI+K+LTAKDYALILGMPGTGKTSTMV+A
Sbjct: 872 APRFDSGCIFSQDPAISYVWSVKSLNGDQRRAILKILTAKDYALILGMPGTGKTSTMVYA 931
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
VKALLMRGASILLTSYTNSAVDNLLIKLK+Q E+VH + + C N
Sbjct: 932 VKALLMRGASILLTSYTNSAVDNLLIKLKAQVYT-----AQEIVH--LLQCCRRGELRNR 984
Query: 1041 VEEIKKRLDQVKVVAVTCL 1059
+ I + +++ ++A L
Sbjct: 985 ILNITAKSEKMSLIAFPWL 1003
>gi|297734699|emb|CBI16750.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/647 (75%), Positives = 564/647 (87%), Gaps = 2/647 (0%)
Query: 701 LRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSG 760
+ A+GG+ E SGLG++FDS+I HLTT+H +FLRHWD LIDLEAKEM+V+K IW S
Sbjct: 31 IYAHGGSMESSGLGDLFDSNINHLTTSHFAFLRHWDWLIDLEAKEMEVMKKGIWRSHSLK 90
Query: 761 GNHFTGCLSSIVLDASNEH--QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
+ T CLSSIVLD SN+H + S++DN+F+Y FVRQ++PS ++ + DSL + P
Sbjct: 91 RDPSTSCLSSIVLDTSNKHPQKNSFKDNKFIYRFVRQNVPSFHVKEHNEDSLPSVSSPAN 150
Query: 819 DMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
D+DCTLR+GDYVILSTES LA+ASG+IT+ISRFHV V FSK LRLP SS+ LL
Sbjct: 151 DLDCTLRNGDYVILSTESGHLALASGVITDISRFHVYVCFSKRLRLPWSKRSSEEQDLLG 210
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
EV+RI+KDEI+TSF+VMR+NL+QLFLQS Q S LR+MIVDLE PRFD G +FSQDPA+SY
Sbjct: 211 EVFRINKDEIVTSFAVMRFNLIQLFLQSMQGSHLRKMIVDLEVPRFDGGCIFSQDPAISY 270
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
I SEKSLN+DQR+AI+K+LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN
Sbjct: 271 IRSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 330
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTC 1058
SAVDNLLIKLK+Q+IDFVRIGRHEVVH+EIQ HC S M+I+SVE+IK RLDQV VVAVTC
Sbjct: 331 SAVDNLLIKLKAQNIDFVRIGRHEVVHEEIQGHCFSGMDIHSVEDIKLRLDQVSVVAVTC 390
Query: 1059 LGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN 1118
LGITNPLL +K+FD+CIMDEAGQTTLPVSLGPLMFAS FVLVGDHYQLPPLVQS EAREN
Sbjct: 391 LGITNPLLANKRFDICIMDEAGQTTLPVSLGPLMFASIFVLVGDHYQLPPLVQSAEAREN 450
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
GM ISLF RLSE HPQAISALQSQYRMCQ IM LSNALIYG+RL CGS +IANA++K S
Sbjct: 451 GMGISLFCRLSEAHPQAISALQSQYRMCQSIMALSNALIYGNRLRCGSSQIANARLKFSS 510
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
+S S WLKEAL+P RPVIF+NTDML A+EAKDH+T+NNP+EAC+I+++ +ELV N IEG
Sbjct: 511 SNSISSWLKEALDPERPVIFINTDMLSAFEAKDHKTVNNPIEACIISEVAEELVNNGIEG 570
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+DIGIITPYNSQANLIRH++S +SVEI+TIDKYQGRDKDCILVSFVRSSENPRNCTSSLL
Sbjct: 571 EDIGIITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 630
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
GDWHRINVALTRAK+KLIMVGS RTLSKVPLL+LLI KV EQSG LN
Sbjct: 631 GDWHRINVALTRAKRKLIMVGSFRTLSKVPLLRLLIEKVEEQSGRLN 677
>gi|302804656|ref|XP_002984080.1| hypothetical protein SELMODRAFT_451029 [Selaginella moellendorffii]
gi|300148432|gb|EFJ15092.1| hypothetical protein SELMODRAFT_451029 [Selaginella moellendorffii]
Length = 1181
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/1072 (46%), Positives = 702/1072 (65%), Gaps = 78/1072 (7%)
Query: 305 QAFLELLDQVKDAISVDASVSSDK------EAYLSKSQDKNGAGMLLEANSVVNGVPTDP 358
+ L+LLDQV+ IS D + +++ K+ D E ++ V+ + D
Sbjct: 145 KVLLDLLDQVELVISDDKKAPGSEPCVVQPASHIPKNDD--------EQHTNVSRIAEDT 196
Query: 359 PENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVI 418
++ ++LVLEV+E + P KVLRL +E++ E+ VHL ++W +V+
Sbjct: 197 KPDI------YYLVLEVTESEYQKEHGPGCYPQKVLRLFDEKNAVEKLVHLRDEWSSSVV 250
Query: 419 APGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE 478
PGDTVN+IG+F KC V + N L++HPDVLVSG+RV +SFSC RR+VL+ERLK +
Sbjct: 251 RPGDTVNIIGDFGADNKCIVDHKANLLVLHPDVLVSGSRVGSSFSCSRRAVLNERLKSFD 310
Query: 479 RSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVE 538
S++ALLGT+LH++FQ L E P+ L+ A+ ++ +I+ LYA N+ + LV+
Sbjct: 311 SSMAALLGTMLHRLFQKALTAEKPSHDDLQVQAKRIVLDHIDGLYALAGNQKEALIKLVD 370
Query: 539 AIPKMLNWIILFKDSQDLNTPTVDFG-SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDAS 597
AIP +L+W+ +++ ++ + +DFG G +++ I+EV DIEEM +PKYGLKGMIDAS
Sbjct: 371 AIPPLLDWLQTYRNPKESSEANIDFGMGTGERRVAITEVVDIEEMILSPKYGLKGMIDAS 430
Query: 598 IRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
+RV E +PLEFKTG+ GQ+ +EHRAQVILYTLLMS+RY + ++ G+LY
Sbjct: 431 VRVDEEH---------MPLEFKTGRATTGQAGVEHRAQVILYTLLMSDRYSQDVNQGMLY 481
Query: 658 YLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY------------- 704
YL + QT G+ QR+D+ GL+MRRNE A+ +++A +TQ LPPML++
Sbjct: 482 YLHTKQTLGIQAQRADVTGLLMRRNEHASHLLRALSTQALPPMLQSSHMCRGCPLLDVCT 541
Query: 705 -------GGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSR 757
GG E SGLG +FD+ HL H FL+HW+ LIDLEA+ ++EIW
Sbjct: 542 MYHKVQDGGTGESSGLGEVFDAFTAHLNHKHGKFLQHWEHLIDLEAQLHFSTQSEIWRPC 601
Query: 758 GSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPT 817
G CLSS+V+ + N+ ++ R +Y F ++ S NL + + +
Sbjct: 602 GGQREERNRCLSSMVITSFNDDKE--RPGSVIYRF-QKAASSSNLQKGNQEQIF------ 652
Query: 818 KDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL 877
TL GDYV+LSTES A+A G++ I+ V VS S+ LRLPG ++ A+ +
Sbjct: 653 -----TL--GDYVLLSTESGFFALAGGIVRSINPDFVMVSVSRALRLPG---TTKANRIF 702
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
HEVWR+D+D+ +SF+VMRYN++QLF++ + + R +IVDLEAP FD+ SQDPA +
Sbjct: 703 HEVWRLDRDDSSSSFAVMRYNVLQLFVRDG-ARRSRELIVDLEAPVFDNFLRVSQDPAST 761
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
Y+ + +LN DQR AI K+++A+DY LILGMPGTGKTST+V+AV+ALL+RG SILL SYT
Sbjct: 762 YVNTLTNLNKDQRSAIGKIISARDYCLILGMPGTGKTSTIVYAVRALLLRGLSILLASYT 821
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVT 1057
NSA+DN+L+KLKSQ +DFVR+GR E +H E+ +H + N+ SV+E+ ++ Q +VV T
Sbjct: 822 NSAIDNILLKLKSQGVDFVRVGRPETIHPELVQHAI-GTNVTSVDELSLKISQARVVGTT 880
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGIT+ L + +KFDVCI+DEAGQ TLPV LGPL +A FVLVGDHYQLPPLVQS EARE
Sbjct: 881 CLGITHALFSRRKFDVCIVDEAGQITLPVCLGPLRYARAFVLVGDHYQLPPLVQSAEARE 940
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
GM ISLFR+LSE HP A++AL+ QYRMC IM LSN LIYG+RL CGS E+ANA++ V
Sbjct: 941 KGMAISLFRKLSEAHPFAVAALEFQYRMCSAIMNLSNVLIYGNRLRCGSTEVANARLYVD 1000
Query: 1178 DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
PW ++ L+ V+F++ D + + + +N VE ++ I L K ++
Sbjct: 1001 ISKGLPPWTQQVLDCALSVLFLDVDNISSQDRHHGHAKHNSVECSVLIDILHNLKKGGVD 1060
Query: 1238 GKDIGIITPYNSQANLIRHSLS-----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+ +G+I+PY Q + IR +S ++ VE+HTIDKYQG+DKDCILVSF S ++
Sbjct: 1061 TRSVGVISPYKGQVDYIRQRISDNGAGLADVEVHTIDKYQGKDKDCILVSFALSEDH--R 1118
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
SLL DWHRINVA+TRAKKKLIM+GS + LS +PLL+LLI +V +Q G++
Sbjct: 1119 VLGSLLTDWHRINVAITRAKKKLIMIGSMKALSSIPLLELLIQQVQDQGGLV 1170
>gi|302753268|ref|XP_002960058.1| hypothetical protein SELMODRAFT_451020 [Selaginella moellendorffii]
gi|300170997|gb|EFJ37597.1| hypothetical protein SELMODRAFT_451020 [Selaginella moellendorffii]
Length = 1249
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/1093 (45%), Positives = 700/1093 (64%), Gaps = 101/1093 (9%)
Query: 305 QAFLELLDQVKDAISVDASVSSDK------EAYLSKSQDKNGAGMLLEANSVVNGVPTDP 358
+ L+LLDQV+ IS D + +++ K+ D E ++ V+ + D
Sbjct: 145 KVLLDLLDQVELVISDDKKAPGSEPCVVQPASHIPKNDD--------EQHTNVSRIAEDT 196
Query: 359 PENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVI 418
++ ++LVLEV+E + P KVLRL +E++ E+ VHL ++W +VI
Sbjct: 197 KPDI------YYLVLEVTESEYQKEHGPGCYPQKVLRLFDEKNAVEKLVHLRDEWSSSVI 250
Query: 419 APGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE 478
PGDTVN+IG+F KC V + N L++HPDVLVSG+RV +SFSC RR+VL+ERLK +
Sbjct: 251 RPGDTVNIIGDFGADNKCIVDHKANLLVLHPDVLVSGSRVGSSFSCSRRAVLNERLKSFD 310
Query: 479 RSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVE 538
S++ALLGT+LH++FQ L E P+ L+ A+ ++ +I+ LYA NE + LV+
Sbjct: 311 SSMAALLGTMLHRLFQKALTAEKPSHDDLQVQAKRIVLDHIDGLYALAGNEKEALIKLVD 370
Query: 539 AIPKMLNWIILFKDSQDLNTPTVDFG-SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDAS 597
AIP +L+W+ +++ ++ + +DFG G +++ I+EV DIEEM +PKYGLKGMIDAS
Sbjct: 371 AIPPLLDWLQTYRNPKESSEANIDFGMGTGERRVAITEVVDIEEMILSPKYGLKGMIDAS 430
Query: 598 IRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
+RV E +PLEFKTG+ GQ+ +EHRAQVILYTLLMS+RY + ++ G+LY
Sbjct: 431 VRVDEEH---------MPLEFKTGRATTGQAGVEHRAQVILYTLLMSDRYSQDVNQGMLY 481
Query: 658 YLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY------------- 704
YL + QT G+ QR+D+ GL+MRRNE A+ +++A +TQ LPPML++
Sbjct: 482 YLHTKQTLGIQAQRADVTGLLMRRNEHASHLLRALSTQALPPMLQSSHMCRGCPLLDVCT 541
Query: 705 ------------------------GGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLID 740
GG E SGLG +FD+ HL H FL+HW+ LID
Sbjct: 542 MYHKVCAHKCRCFRDPDNELQLQDGGTGESSGLGEVFDAFTAHLNHKHGKFLQHWEHLID 601
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSP 800
LEA+ ++EIW + G CLSS+V+ + N+ ++ R +Y F ++ S
Sbjct: 602 LEAQLHFSSQSEIWRTYGGQREERNRCLSSMVITSFNDDKE--RPGSVIYRF-QKAASSS 658
Query: 801 NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSK 860
NL + + + TL GDYV+LSTES A+A G++ ++ V VS S+
Sbjct: 659 NLQKGNQEQIF-----------TL--GDYVLLSTESGFFALAGGIVRSVNPDCVMVSVSR 705
Query: 861 PLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLE 920
LRLPG ++ A+ + HEVWR+D+D+ +SF+VMRYN++QLF++ + + R +IVDLE
Sbjct: 706 ALRLPG---TTKANRIFHEVWRLDRDDSSSSFAVMRYNVLQLFVRDG-ARRSRELIVDLE 761
Query: 921 APRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
AP FD+ SQDPA +Y+ + +LN DQR AI K+++A+DY LILGMPGTGKTST+V+A
Sbjct: 762 APVFDNFLRVSQDPASTYVNTLTNLNKDQRSAIGKIISARDYCLILGMPGTGKTSTIVYA 821
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
V+ALL+RG SILL SYTNSA+DN+L+KLKSQ +DFVR+GR E +H E+ +H + N+ S
Sbjct: 822 VRALLLRGLSILLASYTNSAIDNILLKLKSQGVDFVRVGRPETIHPELVQHAI-GTNVTS 880
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
V+E+ ++ Q +VV TCLGIT+ L + +KFDVCI+DEAGQ TLPV LGPL +A FVLV
Sbjct: 881 VDELSLKISQARVVGATCLGITHALFSRRKFDVCIVDEAGQITLPVCLGPLRYARAFVLV 940
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDHYQLPPLVQS EARE GM ISLFR+LSE HP A++AL+ QYRMC IM LSN LIYG+
Sbjct: 941 GDHYQLPPLVQSAEAREKGMAISLFRKLSEAHPFAVAALEFQYRMCSAIMNLSNVLIYGN 1000
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKE----ALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
RL CGS E+ANA++ V PW ++ L+ R +N D + + + +
Sbjct: 1001 RLRCGSTEVANARLYVDISKGLPPWTQQVNESVLSGYR--FRINADNISSQDRHHGHAKH 1058
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-----VSSVEIHTIDKY 1271
N VE ++ I L K ++ + +G+I+PY Q + IR +S ++ VE+HTIDKY
Sbjct: 1059 NSVECSVLIDILHNLKKGGVDTRSVGVISPYKGQVDYIRQRISDNGAGLADVEVHTIDKY 1118
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
QG+DKDCILVSF S ++ SLL DWHRINVA+TRAKKKLIM+GS + LS +PLL
Sbjct: 1119 QGKDKDCILVSFALSEDH--RVLGSLLTDWHRINVAITRAKKKLIMIGSMKALSSIPLLG 1176
Query: 1332 LLINKVGEQSGIL 1344
LLI +V +Q G++
Sbjct: 1177 LLIQQVQDQGGLV 1189
>gi|356515310|ref|XP_003526344.1| PREDICTED: uncharacterized protein LOC100799415 [Glycine max]
Length = 3081
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/514 (75%), Positives = 454/514 (88%), Gaps = 2/514 (0%)
Query: 831 ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMT 890
ILS +S +A G+I++IS HVSVSFSK LR+PG SSS A L +VWRIDKDE +T
Sbjct: 2550 ILSNQSSHQIIAKGVISDISPIHVSVSFSKRLRIPG--SSSTAHDLSQQVWRIDKDEYVT 2607
Query: 891 SFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQR 950
SF++MR+NLVQLFLQ+ QS+ LRRMIVDLEAPRFDSGS+ SQDPA+SY+WSEKSLNDDQR
Sbjct: 2608 SFAIMRFNLVQLFLQNDQSAHLRRMIVDLEAPRFDSGSLVSQDPAISYVWSEKSLNDDQR 2667
Query: 951 RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
AI+K+LTAKDYALILGMPGTGKTST+VHAVKALL+RG SILLT+YTNSAVDNLLIKLK+
Sbjct: 2668 GAILKILTAKDYALILGMPGTGKTSTLVHAVKALLIRGTSILLTAYTNSAVDNLLIKLKA 2727
Query: 1011 QSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
Q IDFVRIGRHEVV++E+++HCLSAMN+ VE+IK RL+QVKVVAVTCLGI++PLL + +
Sbjct: 2728 QGIDFVRIGRHEVVNEEVREHCLSAMNVQGVEDIKIRLEQVKVVAVTCLGISSPLLANTR 2787
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDVCIMDEAGQTTLPVSLGPL+FAS FVLVGDHYQLPPLVQS EARENGM ISLF RLSE
Sbjct: 2788 FDVCIMDEAGQTTLPVSLGPLIFASTFVLVGDHYQLPPLVQSAEARENGMGISLFCRLSE 2847
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
HP+AISALQSQYRMCQ IM+LSNALIYGDRL CGS E+AN+K++ S L+ PWL++ L
Sbjct: 2848 AHPEAISALQSQYRMCQDIMDLSNALIYGDRLRCGSFEVANSKLEFSGLNCDLPWLEDVL 2907
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP RPVIF++TD LPA EA+D + +NNP+EA +IA++ +ELVKN I + IGIITPYNSQ
Sbjct: 2908 NPRRPVIFIDTDKLPALEARDQKIVNNPIEAQIIAEVAKELVKNGIGSEHIGIITPYNSQ 2967
Query: 1251 ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
ANLIR++ S++S+EIHTIDKYQGRDKDCILVSFVRS+ENP +C +SLLGDWHRINVALTR
Sbjct: 2968 ANLIRNAASMTSLEIHTIDKYQGRDKDCILVSFVRSTENPTSCAASLLGDWHRINVALTR 3027
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
AKKKLIMVGS RTL +VPLLKLLI KV EQSGIL
Sbjct: 3028 AKKKLIMVGSRRTLLRVPLLKLLIKKVEEQSGIL 3061
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/750 (51%), Positives = 476/750 (63%), Gaps = 109/750 (14%)
Query: 113 RFKFSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQ 172
RFKFSP ML+K SQ + DEVTW ISPVNERL AVSK PE I+ LA SS++N L+ +
Sbjct: 61 RFKFSPGMLVKQSQDEVVDEVTWKISPVNERLQAVSK-YTPEVIKALAASSKIN-LSPIR 118
Query: 173 CSHNKSKQ-----PSPSPKAINRSLTTGRKRVNPCEDANLDGNGNNANYSVSSQQSPFRT 227
S NK SP+PK + KR++ D S QSPFRT
Sbjct: 119 SSGNKETCLDKVITSPTPK-----VPLSFKRISSARDV--------------SGQSPFRT 159
Query: 228 PPSLSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFIS 287
PPS Y DK+ D +R +LL+
Sbjct: 160 PPS--YRPDKVQR------VKDIERIRPCDNLLLR------------------------- 186
Query: 288 TWYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSK-SQDKNGAGMLLE 346
+K+A LELLDQV+DAI+VD + Y K QD + ++
Sbjct: 187 --------------QNKKALLELLDQVEDAIAVDDVTVCNNNTYSFKVPQDLIANELPVK 232
Query: 347 ANSVVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAK-SPYKVLRLLNEQSGEER 405
N V +D P+ V S ++LVLEVSE R AD DA S YKVLRLLNEQ+GEER
Sbjct: 233 VNPTVERTKSDIPKEVVDVFSSNYLVLEVSEL-RSADSSDAPCSSYKVLRLLNEQTGEER 291
Query: 406 AVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCP 465
AV+L +WF +VIAPGDTV++IG+FD G CD+ NFLIVHPD+LVSGTRVAAS SCP
Sbjct: 292 AVNLHNEWFDSVIAPGDTVHIIGQFDLGGNCDIDHNKNFLIVHPDILVSGTRVAASLSCP 351
Query: 466 RRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYAC 525
RR+VLDERLK ++ SI AL GTLLHQIFQAGL KE PT+ F+E+YA +VLQ+NIESLYAC
Sbjct: 352 RRTVLDERLKNNDYSIIALTGTLLHQIFQAGLTKENPTVNFMEDYAEVVLQRNIESLYAC 411
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFG-SDGLKKLKISEVTDIEEMAW 584
GVNEND+ KTL +AIP++L+WI FK++++ +V+FG D K + ISEV DIEEMAW
Sbjct: 412 GVNENDVRKTLRDAIPRILSWIKQFKNTKERKDLSVNFGFDDEPKNVGISEVIDIEEMAW 471
Query: 585 APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMS 644
APKYGLKGMIDAS+RVKI+S++++ I+PLEFKTGK P QSS+EHRAQVILYTLLMS
Sbjct: 472 APKYGLKGMIDASVRVKIQSQKDDPEEKIMPLEFKTGKAPYSQSSVEHRAQVILYTLLMS 531
Query: 645 ERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML--- 701
ERY K +DSGLLYYL+SDQTQG++VQRSDL GLIMRRNE A+D++KA T QQLPPML
Sbjct: 532 ERYQKAVDSGLLYYLRSDQTQGIVVQRSDLTGLIMRRNELASDLLKALTLQQLPPMLQSP 591
Query: 702 ----------------RAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKE 745
+A+GG+ E SGLG FDS H+T++H FL WDRLIDLEAKE
Sbjct: 592 SICKGCRHLNVCSIYHKAHGGSTESSGLGEAFDSLSNHMTSSHSKFLCRWDRLIDLEAKE 651
Query: 746 MQVVKNEIWCSR--GSGGNHFTGCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPN 801
+++K + S SGG LSSIVLDAS HQKS DN+FVYHF++Q S
Sbjct: 652 TELLKKGVLQSHRLNSGG------LSSIVLDASQGIPHQKSLNDNKFVYHFIQQDSSSSL 705
Query: 802 LNASDGDSLIGAAIPTKDMDCTLRSGDYVI 831
D S +A D+D TLRSGD+VI
Sbjct: 706 SGVFDASS---SASLKNDLDFTLRSGDHVI 732
>gi|297734697|emb|CBI16748.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/745 (53%), Positives = 484/745 (64%), Gaps = 109/745 (14%)
Query: 1 MPQRKKANSSRKLQSSQPQPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLIHSVSSP 60
M RKK +S QP+KFGIQHFF RH+Q+S+ PN +V +P
Sbjct: 1 MAPRKKPSSKSNQNQPNSQPSKFGIQHFFLRHSQSST---------SRPND----AVCTP 47
Query: 61 NCPPFSVYRNPSDSAPSKKNSPQSALEN-TPPDNI--LPIDDETNSTHHSPEISK----- 112
P PS SAP +N + EN TPP NI + +D E N + SPE+SK
Sbjct: 48 GPNP------PSQSAPPLQNPTAACPENSTPPGNIPAMAVDVEENPSQVSPEVSKSMALK 101
Query: 113 RFKFSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQ 172
RFKFSP MLIK SQ DG DEVTW ISPVNERL A++K+ PE +
Sbjct: 102 RFKFSPGMLIKQSQDDGSDEVTWKISPVNERLQAMTKKHGPEWL---------------- 145
Query: 173 CSHNKSKQPSPSPKAINRSLT-TGRKRVNPCEDAN-LDGNGNNANYS----VSSQQSPFR 226
CS P+ KA +S+ + R + + +D NGN + + V +QSPFR
Sbjct: 146 CS--------PTMKASEKSVVFSNRVSLKKVKLGQVMDSNGNEIDMTDPGVVRKRQSPFR 197
Query: 227 TPPSLSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNTIRFI 286
TPPSLSY H+K +GV C SD +GLR
Sbjct: 198 TPPSLSYCHEKNIDGVDCKLVSDQMGLRQ------------------------------- 226
Query: 287 STWYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLE 346
HK+A LELLDQV+DAISV+ SVSSD EA LSK Q NG M L
Sbjct: 227 ----------------HKKALLELLDQVEDAISVEESVSSDGEACLSKVQCINGDEMPLR 270
Query: 347 ANSVVNGVPTDPPENVNG-TSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEER 405
+ + P E VNG S+ FLVLEVSEK AD A+ P KVLRLLNE++GEE+
Sbjct: 271 VDPALKIPEMGPTEKVNGECSNIIFLVLEVSEKREYADLSGAQCPSKVLRLLNEKTGEEQ 330
Query: 406 AVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCP 465
AV+L ++WF++VIAPGDT++VIG+FDDQGKCDV +NNFLIVHPD+LVSGTRVAASFSC
Sbjct: 331 AVYLRDEWFYSVIAPGDTIHVIGKFDDQGKCDVDHDNNFLIVHPDILVSGTRVAASFSCS 390
Query: 466 RRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYAC 525
RR+VLDERLKCSE S +AL+GTLLHQIFQAGL++EIPT FLEEYAR+V+QKN+ESLYAC
Sbjct: 391 RRTVLDERLKCSEHSTAALIGTLLHQIFQAGLIREIPTKVFLEEYARIVVQKNLESLYAC 450
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS-DGLKKLKISEVTDIEEMAW 584
GVNE+D++KTL+EA P++LNWI+LFK+SQ+ TVDFGS DGLK++ +SEV DIEEMAW
Sbjct: 451 GVNEDDMYKTLIEATPRILNWIVLFKNSQEYRGATVDFGSDDGLKRVNVSEVIDIEEMAW 510
Query: 585 APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMS 644
APKYGLKGMIDAS+R+K ES E+N +I+PLEFKTGK GQ++MEH AQVILYTLLMS
Sbjct: 511 APKYGLKGMIDASLRIKFESNTKEVNEIIMPLEFKTGKGTKGQATMEHTAQVILYTLLMS 570
Query: 645 ERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY 704
ERYLK IDSGLLYYL +D TQG+ V+RSDLVGLIMRRNE A DI+KAS QQLPPML++
Sbjct: 571 ERYLKPIDSGLLYYLNTDHTQGIAVKRSDLVGLIMRRNELAKDILKASMMQQLPPMLQSP 630
Query: 705 GGNKECSGLGNMFDSHIYHLTTAHC 729
K C L IYH +C
Sbjct: 631 SMCKSCRHLNA---CTIYHKMGKYC 652
>gi|389623269|ref|XP_003709288.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae
70-15]
gi|351648817|gb|EHA56676.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae
70-15]
gi|440466068|gb|ELQ35355.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae Y34]
gi|440484931|gb|ELQ64938.1| DNA replication ATP-dependent helicase dna2 [Magnaporthe oryzae P131]
Length = 1689
Score = 634 bits (1634), Expect = e-178, Method: Compositional matrix adjust.
Identities = 384/1032 (37%), Positives = 574/1032 (55%), Gaps = 136/1032 (13%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L L+ + + VHL DW T ++ V++IG+F+ G+C + N LI+HP
Sbjct: 575 PEKILLLVEDTTKANVTVHLRGDWIETPVSTKAFVHIIGDFEHSGRCIIDNSQNMLILHP 634
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SFSC RR+VL +R+K SE S + GT+LH+IFQ LM + +FL
Sbjct: 635 DQLISSTVVADSFSCTRRAVLQDRVKATSEASPPLVYGTMLHEIFQEALMANKWSSEFLT 694
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVD---FGS 565
+ ++IE LY V+ + + L+ + +M +W F N P D G
Sbjct: 695 ALVDKNIGRHIEDLYTIKVSLGEAREHLLSKMREMRSWAEAFVS----NFPKSDAIVHGR 750
Query: 566 DGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+G K + +S++ D+EE W+P YGLKG IDA+++V ++ N N + +P E KTGK
Sbjct: 751 NGEKANMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMKDGNNRRN-LTVPFEVKTGKNV 809
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
N H+AQ LY LL+S+RY I G+LYY+++ QT + R +L ++M+RN
Sbjct: 810 NSN----HQAQTALYNLLLSDRYDIEIAYGILYYMETSQTIRIPAVRHELRHMVMQRNTL 865
Query: 685 ANDIIKASTTQQLPPMLRAYG--------------------GNKECSGLGNMFDSHIYHL 724
A I + S QLPPM +A G+ E SG+ FD + HL
Sbjct: 866 ACYIRERSV--QLPPMKKAKNACGRCYAQTSCFIYHKLADDGDGETSGMQGKFDEVVQHL 923
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKS 782
T H F W+ L+ E KE Q ++ E+W + C S++VL+ + E + S
Sbjct: 924 TPTHKEFFLKWEDLLTKEEKESQKLRRELWTMLSTEREKVGRCFSNVVLEEGSAVEDKNS 983
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVA 842
+ NRF Y F++ + S N + M+ L G+ +++S E+ A+A
Sbjct: 984 PKINRFQYTFLKDDVTS-NFSF---------------MESQLAVGEPIVVSDENGHFALA 1027
Query: 843 SGLITEISRFHVSVSFSKPL-----RLPGRNS-SSDADSLLHEV---------------- 880
G + +++ ++V+ + L R PG + ++ + + EV
Sbjct: 1028 LGFVVAVTKRRITVAVDRRLHNARIRQPGFDEVNNQVFASIMEVGPDRVGTQPPLGTKEP 1087
Query: 881 ---WRIDKDEIMTSFSVMRYNLVQLFLQSAQSS-QLRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+DKDE + +R NLVQ+ S LRR++VDLE P F + + +
Sbjct: 1088 RIRYRLDKDEFSNGMATVRNNLVQVMANGPSGSLDLRRLVVDLEPPTFKTVATQYE---- 1143
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
I +SLN DQ++A+ KV++AKDYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSY
Sbjct: 1144 --ISDGESLNVDQKKAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALIRQGKSVLLTSY 1201
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T+SAVDN+L+KLK SI +R+G VH E+Q+ L+A +NS EEI+ + VVA
Sbjct: 1202 THSAVDNILLKLKGDSIPVLRLGAPAKVHPEVQEFATLAAQPMNSFEEIRTAWHDLPVVA 1261
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TCLGI++PL ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPPLVQ+ EA
Sbjct: 1262 TTCLGISHPLFNERTFDYCIVDEASQITLPICLGPIRMARTFVLVGDHNQLPPLVQNEEA 1321
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
R+ G+++SLF+ LS+ HP ++ L+ QYRMC+ +M LSN LIY L CG++E+ K+
Sbjct: 1322 RKGGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDVMALSNELIYEGHLKCGTEELRLRKLD 1381
Query: 1176 V---------------------------------SDLSSCSPWLKEALNPCRPVIFVNTD 1202
+ +D +SC WL+ ++P V FVNTD
Sbjct: 1382 IPFPEALSRHHYDASSFMSLSRSQPVFSLPKSFCTDGNSC--WLRHLVDPDTRVAFVNTD 1439
Query: 1203 MLP--AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-- 1258
LP EAK ++ + NPVEA L+ ++ + L+ + +IG++T Y SQ L++H L
Sbjct: 1440 ALPDSREEAKGNRIV-NPVEAQLVVQLVESLMTLGVPANEIGVMTHYRSQLALLKHKLLR 1498
Query: 1259 -----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC-TSSLLGDWHRINVALTRAK 1312
++VE+HT D++QGRDK+ +++S VRS+E C LL DW RINVA TRAK
Sbjct: 1499 GKNTGDATAVEMHTADRFQGRDKEVVVLSLVRSNE---ACHIGDLLRDWRRINVAFTRAK 1555
Query: 1313 KKLIMVGSCRTL 1324
KL+++GS TL
Sbjct: 1556 TKLLVIGSRETL 1567
>gi|340939180|gb|EGS19802.1| DNA replication ATP-dependent helicase dna2-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1848
Score = 632 bits (1630), Expect = e-178, Method: Compositional matrix adjust.
Identities = 376/1056 (35%), Positives = 582/1056 (55%), Gaps = 136/1056 (12%)
Query: 369 HFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG 428
+LV +V E + D + P K++ + E+ + V L +DW+ T +P V++IG
Sbjct: 541 RYLVTKVLEDSY-IDQYQRQCPEKIIVVQAERDNSLKMVRLRDDWYDTQASPKAYVHIIG 599
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GT 487
F+ G+ + N +I+HPD L+S T VA SF+C RR+VL +R+K + S AL+ GT
Sbjct: 600 NFEPTGEFIIDNNKNLIILHPDQLISATVVADSFTCMRRAVLQDRVKAASDSSPALVYGT 659
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI 547
LLH++FQ+ LM KFL+ L+K++E LY V+ +D L+ +P+M +W
Sbjct: 660 LLHEVFQSALMANRWDGKFLQSVVDSALKKHLEDLYVIRVSIDDARSYLMSKMPEMQSWA 719
Query: 548 ILFKDSQDLNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKR 606
F + V G +G + + +S++ D+EE W+P YGLKG IDA+++V + +
Sbjct: 720 QTFVSATPKPNALVQ-GRNGERVNMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDGK 778
Query: 607 NEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG 666
+ +P E KTGK ++ H+AQ +LY LL+S+RY + G+LYY++S QT
Sbjct: 779 T-WRTLTVPFEVKTGK----NATANHQAQTVLYNLLLSDRYDVDVVYGILYYMESSQTLR 833
Query: 667 VMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGG 706
+ R +L +IM+RN+ A I + S +LPPM R A G
Sbjct: 834 IPAIRHELRHMIMQRNQLACYIRERSV--RLPPMKRNQNACSKCYAQQSCFTYHKLADDG 891
Query: 707 NKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG 766
N E SGL F+ + HLT H F W+ L+ E KEMQ ++ E+W +
Sbjct: 892 NGETSGLEEKFEDLVKHLTPRHRDFFLKWEDLLTKEEKEMQKLRRELWTMVSTEREKLGR 951
Query: 767 CLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTL 824
C ++++++ +++E + NRF Y FV+++ P PN + ++ L
Sbjct: 952 CFANVIIEEGSASESGNQTKINRFTYTFVKEN-PPPNFSF---------------LESQL 995
Query: 825 RSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPG------------- 866
G+ +++S E A+A G +T + + ++V+ + L R PG
Sbjct: 996 TVGEPIVVSDEQGHFALALGYVTSVKKHRITVAVDRRLHNARVRQPGFDEVNNQVFVGIM 1055
Query: 867 -----RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEA 921
+ + D + + +R+DKDE + +R NLVQ+ S++RR++VDLE
Sbjct: 1056 EVDGGKQKTKDEEPVR---YRLDKDEFSNGMATVRNNLVQIMTDGPFGSKIRRLVVDLEP 1112
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
P+F Q P + SLN DQ+ A+ KV++AKDYAL+LGMPGTGKT+T+ H +
Sbjct: 1113 PQF------KQTPTQYSLTGRDSLNVDQKAAVEKVMSAKDYALVLGMPGTGKTTTIAHII 1166
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINS 1040
+AL+ +G ++LLTSYT++AVDN+L+KL+ +I +R+G VH E+Q L+ ++S
Sbjct: 1167 RALVGQGKTLLLTSYTHTAVDNILLKLRHDNIPILRLGAPAKVHPEVQDFAILAGQPMSS 1226
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
+EEI++ + +VA TCLGI +P+ ++ FD CI+DEA Q TLP+ LGP+ A FVLV
Sbjct: 1227 IEEIRRAWHETPIVATTCLGINHPIFNERIFDYCIVDEASQITLPICLGPIRMARAFVLV 1286
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDH QLPPLVQ+ EAR G++ISLF+ LS+ HPQ++ L+ QYRM + IM LSN LIY
Sbjct: 1287 GDHNQLPPLVQNEEARLGGLDISLFKLLSDVHPQSVVNLEHQYRMNEDIMTLSNILIYNG 1346
Query: 1161 RLSCGSDEIANAKIKVSDLSS--------------------CSP---------------- 1184
RL CG++ + +A++ + D+++ SP
Sbjct: 1347 RLKCGTEALRHAELDIPDMNALRSRHFDVASFLAHSQKKLHTSPTKSKTKPSSFCPSPRK 1406
Query: 1185 ---WLKEALNPCRPVIFVNTD-MLPAYEAKDHQTLN---NPVEACLIAKITQELVKNEIE 1237
WL + L+P V VNTD +LP + N NP EA L+A++ L+ +
Sbjct: 1407 GTCWLADLLDPSARVRLVNTDPLLPLSREQCTARGNRIVNPCEAKLVAQLVDALIVVGVP 1466
Query: 1238 GKDIGIITPYNSQANLIRHSLS---------VSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
++IG++T Y SQ L+RH+L V VE+HT D++QGRDK +++S VRS+E
Sbjct: 1467 AREIGVVTHYRSQLALLRHTLRGLVAGGDAVVGDVEMHTADRFQGRDKSVVILSLVRSNE 1526
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ LL DW R+NVA TRAK+KL++VGS TL
Sbjct: 1527 --QRSIGELLKDWRRVNVAFTRAKRKLLVVGSRSTL 1560
>gi|302408086|ref|XP_003001878.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
VaMs.102]
gi|261359599|gb|EEY22027.1| DNA replication ATP-dependent helicase dna2 [Verticillium albo-atrum
VaMs.102]
Length = 1446
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 379/1032 (36%), Positives = 569/1032 (55%), Gaps = 114/1032 (11%)
Query: 389 SPYKVLRLLN-EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
SP K + L+ E++ R +HL DW+ T V++IG+FD +G+C + + N +I+
Sbjct: 353 SPLKNMLLVQVEKTKIVRTIHLRGDWYETPAHEKSFVHIIGDFDTEGRCVINDDQNMVIL 412
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKF 506
HPD L+S T VA SF+C RR+VL +R+K SE S + GT+LH++FQA L+ +K+
Sbjct: 413 HPDQLISATVVADSFTCTRRAVLQDRVKATSEASAPLVYGTMLHEVFQAALLANQWDLKY 472
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
L +++K++E LY V+ N + L +P++ +W +F SQ V +
Sbjct: 473 LSAVIDTIMEKHVEDLYKIKVSTNIAKEHLQSKMPELSSWADMFVASQPKPDAMVSDRNG 532
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
+ +S++ D+EE W+P YGLKG IDA+++V ++ N+ + +P E KTGK N
Sbjct: 533 KKVNMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMKDG-NDTRVLTVPFEVKTGK--NA 589
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
+S H AQ LY LL+++RY I G+LYY++S QT + R +L +IM+RN+ A
Sbjct: 590 NTS--HVAQTSLYNLLLTDRYDIEIVYGILYYMESSQTSRIPAIRQELRHMIMQRNQLAC 647
Query: 687 DIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTT 726
I + S QLPPM + A G+ SG+G FD + HLT
Sbjct: 648 HIRERSV--QLPPMKKSKHMCNKCYAKTACFIYHRLADNGDDVTSGMGKQFDEVVRHLTP 705
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYR 784
H F W+ L+ E KE Q ++ E+W C S ++++ + E S
Sbjct: 706 THQDFFIKWENLLTKEEKESQKLRRELWTMVSKEREKLGRCFSDVIIEEGSWSEDHNSPS 765
Query: 785 DNRFVYHFV-RQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
NRF Y+F+ R+H + + M+ L G+ +++S E A+A
Sbjct: 766 INRFRYNFIKREHNGTHSF-----------------MESQLAVGEPIVVSDEQGHFALAL 808
Query: 844 GLITEISRFHVSVSFSKPL-----RLPGRNS---------------SSDADSLLHEV--- 880
G +T + + + V+ + L R PG N S D V
Sbjct: 809 GYVTSVRKQRICVAVDRRLHNARVRQPGFNEHDNQVFAGIMEVEPEGSTPDQHQGRVRGE 868
Query: 881 ---WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+DKDE +V+R NLVQ+ + ++RR++VDL PRF + P
Sbjct: 869 PMRYRLDKDEFSNGMAVVRNNLVQIMADDVFGAREIRRLVVDLVPPRFKAA------PTQ 922
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
I SLN DQ+ AI KV+TA+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSY
Sbjct: 923 YEIADRASLNVDQQAAIEKVMTAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSY 982
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T++AVDN+L+KLK SI +R+G VH E+Q+ L+A+ ++S +EIK +VA
Sbjct: 983 THTAVDNILLKLKHDSIPVLRLGAPAKVHPEVQEFATLAAVPMHSFDEIKSAWHDPPIVA 1042
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TCLGI + + ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPPLVQ+ EA
Sbjct: 1043 TTCLGIGHHVFNERTFDYCIVDEASQITLPICLGPIRMAKTFVLVGDHNQLPPLVQNEEA 1102
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
RE G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN+LIY RL CG++++ K+
Sbjct: 1103 REGGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDIMTLSNSLIYKGRLRCGTEQLRFTKLD 1162
Query: 1176 VSDL--------------------SSCSP------WLKEALNPCRPVIFVNTDMLP--AY 1207
V ++ S C+ W+++ L P V F+NTD L +
Sbjct: 1163 VPNMGALQQRHYDSARLLQPSAPRSFCAGPTPGRCWIRDLLEPETRVRFINTDTLQPRTH 1222
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIH 1266
E + NP EA ++ ++ + LV + +IG++T Y SQ L++H L SVE+H
Sbjct: 1223 EEAKGNRIVNPGEARVVTQLVESLVAVGVPETEIGVMTHYRSQLALLKHGLRGHPSVEMH 1282
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T+D++QGRDK+ +++S VRS N LL DW RINVA TRAK KL++VGS TL
Sbjct: 1283 TVDRFQGRDKEVVVLSLVRS--NDACAIGDLLKDWRRINVAFTRAKTKLLVVGSRETLKG 1340
Query: 1327 VPLLKLLINKVG 1338
++L +G
Sbjct: 1341 AGHDEMLARFIG 1352
>gi|346974499|gb|EGY17951.1| DNA replication ATP-dependent helicase dna2 [Verticillium dahliae
VdLs.17]
Length = 1623
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 379/1028 (36%), Positives = 565/1028 (54%), Gaps = 113/1028 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
K+L + E++ R VHL DW+ T V++IG+FD +G+C + + N +I+HPD
Sbjct: 534 KMLLVQVEKTKIVRTVHLRGDWYETPAHEKSFVHIIGDFDAEGRCVINDDQNMVILHPDQ 593
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE S + GT+LH++FQA L+ +K+L
Sbjct: 594 LISATVVADSFTCTRRAVLQDRVKATSEASAPLVYGTMLHEVFQAALLANQWDLKYLSAV 653
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
+++K++E LY V+ N + L +P++ +W +F SQ V +
Sbjct: 654 IDTIMEKHVEDLYKIKVSTNIAKEHLQSKMPELSSWADMFVASQPKPDAMVSDRNGKKVN 713
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+ +S++ D+EE W+P YGLKG IDA+++V ++ N+ + +P E KTGK N +S
Sbjct: 714 MCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMKDG-NDTRVLTVPFEVKTGK--NANTS- 769
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
H AQ LY LL+++RY I G+LYY++S QT + R +L +IM+RN+ A I +
Sbjct: 770 -HVAQTSLYNLLLTDRYDIEIVYGILYYMESSQTSRIPAIRQELRHMIMQRNQLACHIRE 828
Query: 691 ASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAHCS 730
S QLPPM + A G+ SG+G FD + HLT H
Sbjct: 829 RSV--QLPPMKKSKHMCNKCYAKTACFIYHRLADNGDDVTSGMGKQFDEVVRHLTPTHQE 886
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRF 788
F W+ L+ E KE Q ++ E+W C S +V++ + E S NRF
Sbjct: 887 FFIKWENLLTKEEKESQKLRRELWTMVSKEREKLGRCFSDVVIEEGSWSEDHNSPSINRF 946
Query: 789 VYHFV-RQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLIT 847
Y+F+ R+H + + M+ L G+ +++S E A+A G +T
Sbjct: 947 RYNFIKREHNGTHSF-----------------MESQLAVGEPIVVSDEQGHFALALGYVT 989
Query: 848 EISRFHVSVSFSKPL-----RLPGRNS---------------SSDADSLLHEV------W 881
+ + + V+ + L R PG N S D V +
Sbjct: 990 SVRKQRICVAVDRRLHNARVRQPGFNEHDNQVFAGIMEVEPEGSTPDQHQGRVRGEPMRY 1049
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+DKDE +V+R NLVQ+ + ++RR++VDL PRF + P I
Sbjct: 1050 RLDKDEFSNGMAVVRNNLVQIMADDVFGAREIRRLVVDLVPPRFKAA------PTQYEIA 1103
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
SLN DQ+ AI KV+TA+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++A
Sbjct: 1104 DRASLNVDQQAAIEKVMTAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTHTA 1163
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+KLK SI +R+G VH E+Q+ L+A+ ++S +EIK +VA TCL
Sbjct: 1164 VDNILLKLKDDSIPVLRLGAPAKVHPEVQEFATLAAVPMHSFDEIKSAWHDPPIVATTCL 1223
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
GI + + ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPPLVQ+ EARE G
Sbjct: 1224 GIGHHVFNERTFDYCIVDEASQITLPICLGPIRMAKTFVLVGDHNQLPPLVQNEEAREGG 1283
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN+LIY RL CG++++ K+ V +
Sbjct: 1284 LDVSLFKLLSDTHPDSVVNLEHQYRMCEDIMTLSNSLIYKGRLRCGTEQLRFTKLDVPSM 1343
Query: 1180 --------------------SSCSP------WLKEALNPCRPVIFVNTDMLP--AYEAKD 1211
S C+ W+++ L P V F+NTD L +E
Sbjct: 1344 GALRQRHFDSAHLLQPSAPRSFCTGPAPGRCWIRDLLEPEARVRFINTDTLQPRTHEEAK 1403
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDK 1270
+ NP EA ++ ++ + LV + +IG++T Y SQ L++H L SVE+HT D+
Sbjct: 1404 GNRIVNPGEARVVTQLVESLVAVGVAETEIGVMTHYRSQLALLKHGLRGHPSVEMHTADR 1463
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
+QGRDK+ +++S VRS N LL DW RINVA TRAK KL++VGS TL
Sbjct: 1464 FQGRDKEVVVLSLVRS--NDACAIGDLLKDWRRINVAFTRAKTKLLVVGSRETLKGAGHD 1521
Query: 1331 KLLINKVG 1338
++L +G
Sbjct: 1522 EMLARFIG 1529
>gi|429859518|gb|ELA34298.1| DNA replication helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 1575
Score = 629 bits (1622), Expect = e-177, Method: Compositional matrix adjust.
Identities = 383/1037 (36%), Positives = 568/1037 (54%), Gaps = 146/1037 (14%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E D D K+L + + S R +HL DWF T P V+VIG+
Sbjct: 491 YLVTNVLESEY-TDDRDRSRMEKILIVQKDNSKIMRTIHLRGDWFETPAHPKAYVHVIGD 549
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F G+C + N L++HPD LVS T VA SFSC RR+VL +R+K + + + L+ GT+
Sbjct: 550 FSADGRCIIDDSQNILVLHPDQLVSATVVADSFSCMRRAVLQDRVKATSEATAPLVYGTM 609
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+IFQ LM ++FL V++K++E LY K ++A+
Sbjct: 610 LHEIFQEALMANKWDLRFLSTIIDKVIEKHVEDLY----------KIKLDAV-------- 651
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
QD N + + +S++ D+EE W+P YGLKG IDA+++V ++ + +
Sbjct: 652 ----VQDRNGKKAN--------MCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMKDGK-D 698
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ + +P E KTGK N H AQ LY LL+S+RY I G+LYY+++ QT +
Sbjct: 699 LKTLTVPFEVKTGKHANAN----HMAQTALYNLLLSDRYDLEIVYGILYYMETSQTMRIP 754
Query: 669 VQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGNK 708
R +L +IM+RN+ A I + S QLPPM R A GN
Sbjct: 755 TIRHELRHMIMQRNQLACHIRERSV--QLPPMKRSKNMCGKCYAKAPCFIYHKLADDGNG 812
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E SG+ FD + HLT H F W+ L+ E KE Q +K E+W C
Sbjct: 813 ETSGMDVQFDEVVKHLTPKHQDFFLKWENLLTKEEKETQKLKRELWTMVSQEREKVGRCF 872
Query: 769 SSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
S ++++ + E Q + + NRF Y F+++ +P+P G S ++ L
Sbjct: 873 SDVIIEEGSWSEDQGTSKINRFNYTFIKR-LPNP------GHSF---------LESQLAV 916
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR----------------------- 863
G+ +++S E A+A G +T + + +SV+ + L
Sbjct: 917 GEPIVVSDEEGHFALALGYVTAVRKQRISVAVDRRLHNARIRQQGFDESNNQVFASIMEV 976
Query: 864 LPGRNSSSDADSLLHEV---WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDL 919
+P ++ DA + + +R+DKDE +V+R NLVQ + S ++RR++VDL
Sbjct: 977 VPEGSTQDDAQGKIQQAPIRYRLDKDEFSNGMAVVRNNLVQTMAEGVFGSREIRRLVVDL 1036
Query: 920 EAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
PRF + P I +KSLN DQR+AI KV++A+DYAL+LGMPGTGKT+T+ H
Sbjct: 1037 IPPRFKTA------PTQYTIADQKSLNVDQRKAIEKVMSAQDYALVLGMPGTGKTTTIAH 1090
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNI 1038
++AL +G S+LLTSYT++AVDN+L+KLK +R+G VH ++Q+ L+ +
Sbjct: 1091 IIRALTSQGKSVLLTSYTHTAVDNILLKLKDDKTPVLRLGAPAKVHPDVQQFAILAGQPM 1150
Query: 1039 NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
NS +EIK +VA TCLGI +PL ++ FD CI+DEA Q TLP+ LGP+ A FV
Sbjct: 1151 NSFDEIKAAWHDTPIVATTCLGIGHPLFNERTFDYCIVDEASQITLPICLGPIRMAKTFV 1210
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGDH QLPPLVQ+ EARE G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY
Sbjct: 1211 LVGDHNQLPPLVQNEEAREGGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDIMTLSNTLIY 1270
Query: 1159 GDRLSCGSDEIANAKIKVSDLSS--------------------CSP------WLKEALNP 1192
RL CG++++ K+ V ++S+ C+ WL++ L+
Sbjct: 1271 KGRLRCGTEQLRFKKLDVPNMSALKQLHYDSSTILRPGTPKSFCTSMAQSCCWLRDLLDG 1330
Query: 1193 CRPVIFVNTDMLPAY---EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
V FVNTD L EAK ++ + NP EA ++ ++ + L+ + +IG++T Y S
Sbjct: 1331 ETRVKFVNTDTLQPLTREEAKGNRIV-NPAEARIVTQLVEGLLTVGVPDGEIGVMTHYRS 1389
Query: 1250 QANLIRHSLSVS-SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVA 1307
Q +L++H L VE+HT D++QGRDKD +++S VRS++ +C+ LL DW RINVA
Sbjct: 1390 QLSLLKHGLRAHVGVEMHTADRFQGRDKDVVILSLVRSND---SCSIGDLLKDWRRINVA 1446
Query: 1308 LTRAKKKLIMVGSCRTL 1324
TRAK KL++VGS TL
Sbjct: 1447 FTRAKTKLLVVGSKSTL 1463
>gi|402085725|gb|EJT80623.1| DNA replication ATP-dependent helicase dna2 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1716
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 378/1028 (36%), Positives = 558/1028 (54%), Gaps = 123/1028 (11%)
Query: 388 KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+ P ++L + E++ ++ VHL EDW T V+VIGEF++ G C V +N LI+
Sbjct: 590 EKPERILVVRAERTNFDQVVHLREDWLETPATVDSYVHVIGEFEESGMCVVDNSHNMLIL 649
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKF 506
HPD L+S T VA SF C RR+VL +R+K + E S + GT+LH+IFQ LM +F
Sbjct: 650 HPDQLISATVVADSFGCIRRAVLQDRVKATGEASAPMVYGTMLHEIFQEALMANKWDSQF 709
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
L +++++E LY V+ D + L+ + +M W F + + V
Sbjct: 710 LAAVVDTNMERHLEDLYVIKVSLADAREHLLSKMKEMRQWAESFVSAFPRSDAVVQGRHG 769
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
+ +S++ D+EE W+P YGLKG IDA+++V + N+ + +P E KTGK
Sbjct: 770 DKANMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDG-NDRRTLTVPFEVKTGK---- 824
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
H+AQ LY LL+S+RY I G+LYY+++ QT + R +L +IM+RN+ A
Sbjct: 825 NVVANHQAQTALYNLLLSDRYDIEIVFGVLYYMETSQTMRIPAVRHELRHMIMQRNQLAC 884
Query: 687 DIIKASTTQQLPPMLRAYG--------------------GNKECSGLGNMFDSHIYHLTT 726
+ S QLPPM +A G+ E SG+ FD + HL+T
Sbjct: 885 YARERSV--QLPPMKKAKNMCGRCYAQTSCFIYHKLADDGDGETSGMEAKFDEVVKHLST 942
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYR 784
H F W+ L+ E +E Q ++ E+W S C ++V++ + E + + +
Sbjct: 943 THKEFFLKWEDLLTKEERESQKLRRELWTMLSSEREKLGRCFGNVVIEPGSAVEDKDTPK 1002
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
NRF Y FV+ NA S ++ L G+ +++S E A+A G
Sbjct: 1003 INRFQYTFVKD-------NAGPAFSF---------LESQLAVGEPIVVSDEQGHFALALG 1046
Query: 845 LITEISRFHVSVSFSKPL-----RLPGRNS--------------SSDADSLLHEV----- 880
+T + + ++V+ + L R PG + + ADS +
Sbjct: 1047 FVTAVRKRRITVAVDRRLHNSRIRQPGFDEVNNQVFASIMEVGPAGTADSQQSQSTTPSI 1106
Query: 881 -WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+R+DKDE + + +R NLV + S ++RR++VDLEAP F S P
Sbjct: 1107 RYRLDKDEFSSGMATVRNNLVHVMSNGLFGSREIRRLVVDLEAPTFKSA------PTQYE 1160
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
I ++SLN DQ++AI KV+ AKDYAL+LGMPGTGKT+T+ H ++AL +G S+LL SYT+
Sbjct: 1161 ITGKESLNSDQQKAIEKVMGAKDYALVLGMPGTGKTTTIAHIIRALHRQGKSVLLASYTH 1220
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
SAVDN+L+KLK ++ +R+G VH E+Q+ L+A S EEI+ VVA T
Sbjct: 1221 SAVDNILLKLKKDNMQILRLGAPAKVHPEVQEFATLAAQPKKSFEEIRSAWHDSPVVATT 1280
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLG+ + + ++ FD CI+DEA Q TLPV LGP+ A FVLVGDH QLPPLVQ+ EAR
Sbjct: 1281 CLGVNHAVFNERTFDYCIVDEASQITLPVCLGPIRMARTFVLVGDHNQLPPLVQNEEARR 1340
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY RL CG+ E+ K+ V
Sbjct: 1341 GGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDIMTLSNTLIYNGRLKCGTKELRFHKLHVP 1400
Query: 1178 D----------------LSSCSP---------------WLKEALNPCRPVIFVNTDMLP- 1205
D LS P WL L+P V FVNTD LP
Sbjct: 1401 DPAALTRHHYDASSFLALSKSQPAAAVPKSFCTGGAGCWLGHLLDPETRVAFVNTDALPD 1460
Query: 1206 -AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL------ 1258
EAK ++ + NPVEA L+ ++ + L+ + +IG++T Y SQ L+RH L
Sbjct: 1461 NREEAKGNRIV-NPVEAQLVVQLVEALMTVGVPASEIGVMTHYRSQLALLRHKLHRGSSR 1519
Query: 1259 --SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
++VE+HT D++QGRDK+ +++S VR++E+ + LL DW RINVA TRAK KL+
Sbjct: 1520 PGQAAAVEMHTADRFQGRDKEVVVLSLVRNNEDCK--IGELLRDWRRINVAFTRAKTKLL 1577
Query: 1317 MVGSCRTL 1324
++GS TL
Sbjct: 1578 VIGSLETL 1585
>gi|440794470|gb|ELR15630.1| DNA replication factor Dna2 [Acanthamoeba castellanii str. Neff]
Length = 1101
Score = 624 bits (1610), Expect = e-175, Method: Compositional matrix adjust.
Identities = 404/1112 (36%), Positives = 574/1112 (51%), Gaps = 175/1112 (15%)
Query: 370 FLVLEVS--EKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI 427
FLVLEVS E P + KVLRL +E E+ L W T + PG+ V+VI
Sbjct: 27 FLVLEVSVVEYETPGEYCVIIGNEKVLRLFDEVHSVEKFAQLRGPWVCTEVHPGEYVHVI 86
Query: 428 GEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGT 487
G+FD KC V + N LI+HPD+LV+GT V S+ C R+S+L+ + K S ++ + GT
Sbjct: 87 GQFDSNNKCVVDGDENLLILHPDILVTGTTVGESYFCMRKSILNNKAKTSNYAMPLIKGT 146
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI 547
+LH F+ L + + L + + + +YA G + K L AIP M NW
Sbjct: 147 ILHDSFETALGSNDFSTEALSATIQEKISTKLADIYAVGETDITAKKNLEVAIPNMQNWA 206
Query: 548 ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F +Q + F S G +K+ +S+V IEE W+P +GLKG IDAS+ +K++ +
Sbjct: 207 QRFLHAQP--KTEIKFMS-GRQKVCVSKVLAIEENIWSPAFGLKGKIDASVEMKVD-RSG 262
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
+ LPLE KTGK+ ++ H+AQVILYTLLMS+RY I SGLLYY++S +
Sbjct: 263 RAEHLALPLELKTGKL--SPYNIGHQAQVILYTLLMSDRYDTDIRSGLLYYVESGDMMAI 320
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG-------------------GNK 708
+ R +LV +I RRN+ A +++ T +LP M ++ GN
Sbjct: 321 QIARQELVAIIQRRNDIAAHLVQ--KTLRLPGMKKSNACRSCHQLSTCTLYHKALENGNA 378
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-C 767
E SG+ + FD HLT H ++ HWDRLIDLE EM + EIW G TG C
Sbjct: 379 ESSGI-DKFDQLTGHLTAGHMNYFSHWDRLIDLEEAEMYRNREEIWLMSGEEREAKTGRC 437
Query: 768 LSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
+ +V+D + +K F+Y F R + + AA + +D + +G
Sbjct: 438 FNDMVVDKRMDSEKG-----FLYCFKRASVREAEREREQRGGVASAAASSL-LDLAISTG 491
Query: 828 DYVILSTESDRLAVASGLITEISRFHVSVSFSKPL------------------------- 862
DYV++ST + AVASG + E++ VS+ S+ L
Sbjct: 492 DYVVISTVAGDFAVASGFVKELTSTCVSIQMSEELRPPPIPVSGDDGELAGSQMFRGIVE 551
Query: 863 -----------RLPGRN------------SSSDAD-----SLLHEVWRIDKDEIMTSFSV 894
RL N SS D+ +L WR+DK+E+ T FS+
Sbjct: 552 IEDLVPDVQNKRLRSNNANVPRYGAEMHKSSPDSQAAPGATLFDVRWRLDKEELSTGFSL 611
Query: 895 MRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQ--------------DPALSYIW 940
++ NL++LF+ + RR++VDLE P F S SQ +P
Sbjct: 612 VKQNLLRLFVHEGDQKR-RRLVVDLEPPSFLSAQALSQSLSQRSLRKGEVKLEPRPQLDA 670
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ LN DQ+ AI KVL A+DYALIL G S+L+T+YT++A
Sbjct: 671 KKLGLNADQQLAIEKVLQAEDYALILAY-------------------GKSVLITAYTHTA 711
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL------SAMNINSVEEIKKRLDQVKVV 1054
VDNLL+KL +F+R+G+ E V IQ + + SV+E++ ++V
Sbjct: 712 VDNLLLKLLDMGEEFLRLGKPESVDSRIQPYVFHNGKAPGGKAVASVKEVETIFQSARIV 771
Query: 1055 AVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
A TCL I NPL ++FD CI+DEA Q TLPV LGP+ F+ FVLVGDHYQLPPLV + E
Sbjct: 772 ATTCLSINNPLFEKRRFDYCIVDEASQLTLPVCLGPIRFSDVFVLVGDHYQLPPLVLNAE 831
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK- 1173
A+E GM +SLF+RLSE HPQ++ L+ QYRM IM+L N L Y RL D++ + +
Sbjct: 832 AKELGMGVSLFKRLSEAHPQSVVNLEYQYRMNADIMKLCNHLTYSHRLRSLRDQLTHLER 891
Query: 1174 --------IKVSDLSSCSP----------------------WLKEALNPCRPVIFVNTDM 1203
++V++ SP WL+E L+P R V+F+NTD
Sbjct: 892 LPEPLVYGVRVAESGGESPLKGHEPSGDGSLREKEALSALHWLREVLDPERSVVFLNTDS 951
Query: 1204 LPAY------EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR-- 1255
+PA EA L+N +EA L+ +IT L+ ++ D+GII+PY +Q LIR
Sbjct: 952 VPALESRAGDEAAGGGVLSNQIEAELVCQITDGLLLCGLDPADLGIISPYRAQVKLIRSL 1011
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
+ L+ + EIHT+DKYQGRDKDCI+VS VRS N LL DW R+NVA TRA
Sbjct: 1012 MAKINDLTGDATEIHTVDKYQGRDKDCIIVSLVRS--NAEKKVGELLCDWRRVNVAFTRA 1069
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
KKKLI++GS TL L + + + +Q+ +
Sbjct: 1070 KKKLIILGSLSTLENNHLFSIFLQLLRDQNWV 1101
>gi|330942276|ref|XP_003306133.1| hypothetical protein PTT_19173 [Pyrenophora teres f. teres 0-1]
gi|311316527|gb|EFQ85773.1| hypothetical protein PTT_19173 [Pyrenophora teres f. teres 0-1]
Length = 1673
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 378/1056 (35%), Positives = 582/1056 (55%), Gaps = 133/1056 (12%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P KVL + E++ +A+ L + WF T G V+VIGEF + G+C + +N LI+HP
Sbjct: 539 PEKVLSVEEEKTKLFKAITLRQAWFDTPCTTGSFVHVIGEFTNTGQCIIDDHHNMLILHP 598
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SF C RR+VL +R+K + ++ + +L GTLLH++FQ + FL
Sbjct: 599 DHLISSTVVADSFGCLRRAVLQDRVKATSKANAPMLYGTLLHELFQEAMKVNKWDSVFLS 658
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E ++L +++E++ I + + +P++ W LF ++ N V +
Sbjct: 659 ETIDILLPRHLETILEINSTCEAIKEHMSSKLPELQAWAKLFVRAEPQNDAVVRERNGRQ 718
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ I+++ D+EE W+P YGLKG IDA+++V + + E + +P E KTGK S
Sbjct: 719 SIMSINKLLDVEEHVWSPMYGLKGNIDATVQVIMRDDQGE-RTLTVPFEVKTGK---NSS 774
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA--- 685
+ H AQ LY LL+S RY I G+LYYL++ V R+D++ +I++RNE A
Sbjct: 775 NAAHVAQTALYNLLLSNRYDVDIAYGILYYLETSDISRVPAVRNDIMHMIIKRNELACYV 834
Query: 686 NDIIKASTTQQLPPMLRAYGGNKEC--------------SGLGNM--------FDSHIYH 723
D I +LPP+L+ ++C G G M +D +
Sbjct: 835 RDRI------ELPPVLKEDFKCQKCYAQESCFLYHNLVEDGKGEMLNKKAKERYDELVQP 888
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK-- 781
L +H F++ WD L+ E +M + E+W + C S+++L+ + H++
Sbjct: 889 LQPSHQDFMKKWDTLLTKEETDMMKFRRELWTMLSTEREKLGRCFSNVILEPGSAHEEEN 948
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
+ NR+ Y F++Q P+P + ++ +IG I ++S E A+
Sbjct: 949 GQKINRYSYTFIKQR-PAPGFSFTESQLIIGEPI---------------VVSDEQGHFAL 992
Query: 842 ASGLITEISRFHVSVSFSKPL-----RLPGRNSSS------------DADSLL-HE---- 879
A+G +T + + ++V+ + L +LPG NS S + D++ HE
Sbjct: 993 ANGYVTNVKKRRITVAVDRRLHNSRIKLPGFNSQSNQTFAGIMEVTKEGDTVAKHETDEE 1052
Query: 880 --VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
++R+DKDE + R NL+Q+ S ++ LR +IVD AP F + AL
Sbjct: 1053 PVLYRLDKDEFSNGMAAARNNLIQIMDNSVYKAHDLRALIVDGRAPMFKPVT-----DAL 1107
Query: 937 SYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
S S + S+N DQR A+ KV++AKDYAL+LGMPGTGKT+T+ H ++ L+ +G S+LLTS
Sbjct: 1108 SLSKSPQMSMNSDQRAAVSKVMSAKDYALVLGMPGTGKTTTIAHIIRTLVAKGKSVLLTS 1167
Query: 996 YTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVV 1054
YT++AVDN+L+K++ I +R+G + +H E+++ L A +SVEE+++ + VV
Sbjct: 1168 YTHTAVDNILLKIRDDKIGILRLGAAKKIHPEVREFATLGAEPKDSVEELERSWMEPPVV 1227
Query: 1055 AVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
A TCL I +PL + FD CI+DEA Q TLPV LGP+ A KF+LVGDHYQLPPLVQ+ E
Sbjct: 1228 ATTCLTINHPLFNRRVFDYCIVDEASQITLPVCLGPIRMAQKFILVGDHYQLPPLVQNKE 1287
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK- 1173
A E G+++SLF+ L E HPQA+ +L+ QYRMC +M LSN IY RL CG+ IA+ K
Sbjct: 1288 AMEGGLDVSLFKLLCEAHPQAVVSLEHQYRMCADVMLLSNTFIYSGRLKCGTASIASRKL 1347
Query: 1174 -----------------IKVSDLSSCSP------WLKEALNPCRPVIFVNTDMLPA-YEA 1209
++ S +CS WL +L+P +PV+F+NTD++ A E
Sbjct: 1348 TLPKPDGLKTYHQKRYLLRSSAAQTCSGSDTIGCWLNRSLSPDQPVVFINTDLVSATLET 1407
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---------- 1259
+ + N +EA L+ ++T L+ + +IGII Y SQ ++R SLS
Sbjct: 1408 QSGSRITNTLEARLVTQLTVSLLSLGVTADEIGIIAFYRSQLAMLRQSLSSAYTQTQSSE 1467
Query: 1260 ----------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
+ VE+HT DK+QGRDK+ ++VS VRS+EN LL D RINVALT
Sbjct: 1468 LAAPAISGQGCAGVELHTADKFQGRDKEVVIVSCVRSNEN--GVVGDLLKDRRRINVALT 1525
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
RA+ KLI++GS +TLS LL+ ++ E+S +L+
Sbjct: 1526 RARSKLIILGSEKTLSSNELLRDMVALCREKSWVLD 1561
>gi|310798654|gb|EFQ33547.1| DNA replication factor Dna2 [Glomerella graminicola M1.001]
Length = 1618
Score = 620 bits (1600), Expect = e-174, Method: Compositional matrix adjust.
Identities = 380/1038 (36%), Positives = 573/1038 (55%), Gaps = 118/1038 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E N AD K+L + + + R +HL +DW+ T V+VIG
Sbjct: 505 YLVTNVLE-NDYADERGLSRVEKILIVQVDNTKAMRKIHLRDDWYETPAHAKAYVHVIGS 563
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F G+C + +N LI+HPD L+S T VA SFSC RR+VL +R+K + + + L+ GT+
Sbjct: 564 FSPSGQCIIDDSHNILILHPDQLISATVVADSFSCMRRAVLQDRVKATSEATAPLVYGTM 623
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+IFQ L+ ++FL V++K+IE LY V+ + + L + ++ W
Sbjct: 624 LHEIFQEALLANQWDLRFLSGVIDKVMEKHIEDLYKIKVSTSIAKEHLQSKMTELSCWAT 683
Query: 549 LFKDSQDLNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F S+ N V +G K + +S++ D+EE W+P YGLKG IDA+++V + +
Sbjct: 684 AFVASKP-NLDAVVHDRNGKKANMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDGK- 741
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
++ + +P E KTGK N H AQ LY LL+S+RY +I G+LYY+++ QT +
Sbjct: 742 DVKTLTVPFEVKTGKHANSN----HMAQTALYNLLLSDRYDLNIVYGILYYMETSQTMRI 797
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGN 707
R +L +IM+RN+ A I + S QLPPM R A GN
Sbjct: 798 PTIRHELRHMIMQRNQLACHIRERSV--QLPPMKRSKNMCGKCYAKTSCFIYHKLADDGN 855
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SG+ FD + HLT H F W+ L+ E KE Q +K E+W C
Sbjct: 856 AETSGMDKGFDEIVKHLTPKHQEFFLKWENLLTKEEKETQKLKRELWTMVSQAREKVGRC 915
Query: 768 LSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S ++++ + E + + NRF Y F+++ +P+PN + ++ L
Sbjct: 916 FSDVIIEEGSWSEDLGTSKINRFSYTFLKR-VPNPNHSF---------------LESQLA 959
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSSSDA--DSLLH 878
G+ V++S E A+A G +T + + +SV+ + L + PG + + + S++
Sbjct: 960 VGEPVVVSDEQGHFALALGYVTSVRKQRISVAVDRRLHNARIKQPGFDETDNQVFASIME 1019
Query: 879 EV-------------------WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVD 918
V +R+DKDE + +R NLVQ + S ++RR +VD
Sbjct: 1020 VVPEGCAAGQSHGKIKQAPIRYRLDKDEFSNGMATVRNNLVQTMAEGVFGSREIRRAVVD 1079
Query: 919 LEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
L PRF + P + + LN DQ RAI KV++A+DYAL+LGMPGTGKT+T+
Sbjct: 1080 LVPPRFKAA------PTQYVVADRECLNVDQHRAIEKVMSAEDYALVLGMPGTGKTTTIA 1133
Query: 979 HAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMN 1037
H ++AL+ +G S+LLTSYT++AVDN+L+KLK +R+G VH ++Q+ L+
Sbjct: 1134 HIIRALVSQGKSVLLTSYTHTAVDNILLKLKDDKTPILRLGAPAKVHPDVQQFAILAGQP 1193
Query: 1038 INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKF 1097
+ S E+IK+ +VA TCLG+ + L ++ FD CI+DEA Q TLP+ LGP+ A F
Sbjct: 1194 MKSFEQIKEAWHDTPIVATTCLGVGHALFNERTFDYCIVDEASQITLPICLGPIRMAKTF 1253
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALI 1157
VLVGDH QLPPLVQ+ EARE G+++SLF+ LS+ HP ++ L+ QYRMC+ +M LSN LI
Sbjct: 1254 VLVGDHNQLPPLVQNEEAREGGLDVSLFKLLSDTHPDSVVNLEHQYRMCEDVMTLSNTLI 1313
Query: 1158 YGDRLSCGSDEIANAKIKV--------------SDLSSCSP------------WLKEALN 1191
Y RL CG++E+ K+ V S L S +P WL++ L+
Sbjct: 1314 YHGRLRCGTEELRFKKLDVPNMNALKSLHYDSSSMLKSGTPKSFCTSMTESCCWLRDLLD 1373
Query: 1192 PCRPVIFVNTDMLPAY---EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
V F+NTD L + EAK ++ + NP EA ++ ++ + L+ + +IG++T Y
Sbjct: 1374 SEARVRFINTDTLQPHTREEAKGNRIV-NPAEARIVVQLVEGLLTVGVPDGEIGVMTHYR 1432
Query: 1249 SQANLIRHSLSVS-SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINV 1306
SQ +L++H L VE+HT D++QGRDKD +++S VRS+E +C+ LL DW RINV
Sbjct: 1433 SQLSLLKHGLRGHLGVEMHTADRFQGRDKDVVILSLVRSNE---SCSIGELLKDWRRINV 1489
Query: 1307 ALTRAKKKLIMVGSCRTL 1324
A TRAK KL++VGS TL
Sbjct: 1490 AFTRAKTKLLVVGSKSTL 1507
>gi|327355031|gb|EGE83888.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis ATCC 18188]
Length = 1653
Score = 617 bits (1590), Expect = e-173, Method: Compositional matrix adjust.
Identities = 366/1014 (36%), Positives = 561/1014 (55%), Gaps = 110/1014 (10%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P KVL + E++ R + L E W+ T + G +++IG FD G+C V +N +I+HP
Sbjct: 539 PQKVLFVQEEKTNNNRTITLRESWYDTPCSKGSYIHLIGSFDHMGRCVVDNSDNMIILHP 598
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SF+CPRR+VL +R+K SE + + G +LH+IFQA +L
Sbjct: 599 DHLISATVVADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDQSWLR 658
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E L+ +ESLY V ++ + L+ IP + +W +F S+ + S
Sbjct: 659 EIISRTLEHYVESLYEIQVEVSEATEYLMSKIPALSSWADIFMRSRPTIESITEDRSGTT 718
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
L I+++ ++EE W+P YGLKG +DA+++V ++ E + +P E KTG+ S
Sbjct: 719 SCLSINKLLEVEEHIWSPMYGLKGNVDATVQVAVQEG-TEKKTLTVPFELKTGR---NNS 774
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
+ HRAQ LYTLL+S+RY + G+L+YL++ +T V RS++ +I +RN A I
Sbjct: 775 NEAHRAQTALYTLLVSDRYDIDVTFGILFYLEATKTFRVRAIRSEIRQMIQQRNRLAEFI 834
Query: 689 IKASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
K S LPPML+ Y G+ E SG+G F + HLT +H
Sbjct: 835 CKKS---DLPPMLKKARICNQCYAKDACFIYHKVMDDGDDESSGMGTSFIEIVGHLTPSH 891
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDN 786
+F + WD L+ +E +++ + E+W + C +++++ + ++++ + N
Sbjct: 892 QNFFKKWDALLTMEERDILKFRRELWTMLSNEREGVGRCFGNVMVEPGSAYEETGVPKIN 951
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y F + PS N S GDS L G+ +++S E A+A+G +
Sbjct: 952 RFRYTFFKHQPPS---NFSFGDS-------------QLSVGEPIVVSDEKGHFALANGYV 995
Query: 847 TEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--------------------------- 879
T ISR +SV+ + L R S+ D+ H+
Sbjct: 996 THISRTRISVAVDRRLH-NARTRCSNFDADRHQSFTGVMEIVETGGSESTVFPEKAEDTT 1054
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
++R+DKDE + +R NLV + ++ Q+ +LR +I+D P F S S P L
Sbjct: 1055 LYRLDKDEFSNGMATVRNNLVCMMDRNTFQARRLRDLIIDGHIPLFKPTSS-SAIPCLP- 1112
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
E LN DQ +AI KV++A DYALILGMPGTGKT+T+ H ++AL+ +G S+LLTSYT+
Sbjct: 1113 ---ETELNIDQEQAIKKVMSANDYALILGMPGTGKTTTIAHIIRALISQGKSVLLTSYTH 1169
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K+K +I +R+G +H ++QK L+A ++EE++ + ++VA T
Sbjct: 1170 TAVDNILLKVKDDNIRTLRLGATTKIHPDVQKFADLAATPKKTIEELRDIYENSRIVATT 1229
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ EARE
Sbjct: 1230 CLGINHPIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKEARE 1289
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
+G+++SLF+ L + P ++ L+ QYRMC+ IM LSN LIY L CG+ E+A + +K+
Sbjct: 1290 SGLDVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPEVAQSYLKIP 1349
Query: 1178 DL------------------SSC------SPWLKEALNPCRPVIFVNTDMLP--AYEAKD 1211
+L +SC W+++ L+P VNTD L A E+
Sbjct: 1350 NLGRLKQHHVDSLSLPPNVRNSCLGSRYGRCWIRDLLDPVARTRLVNTDPLEPQATESSK 1409
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDK 1270
+ NP+EA + A++ + + I DIG++T Y SQ +L++ +L +E+HT D+
Sbjct: 1410 GSRIINPIEATICAQLVESFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADR 1469
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+QGRDK+ I++S VRS N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1470 FQGRDKEIIIMSCVRS--NSERNVGELLRDWRRVNVAFTRARTKLLIVGSKNTL 1521
>gi|242768912|ref|XP_002341663.1| DNA replication helicase Dna2, putative [Talaromyces stipitatus ATCC
10500]
gi|218724859|gb|EED24276.1| DNA replication helicase Dna2, putative [Talaromyces stipitatus ATCC
10500]
Length = 1657
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 373/1025 (36%), Positives = 571/1025 (55%), Gaps = 129/1025 (12%)
Query: 388 KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
K P +VL + +E++G + + L E WF + +++IG++D +G C V +N +I+
Sbjct: 540 KQPEQVLSVTDEKTGTSKIIILRESWFDSPCTKNSYIHLIGDYDHRGHCIVDNAHNMIIL 599
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKF 506
HPD L+S T VA + +C RR+VL +R+K S+ + + G +LH++FQ + ++
Sbjct: 600 HPDHLISATVVADAVTCQRRAVLQDRIKATSDINAPQVYGHILHEVFQEAMKVNQWDLQS 659
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAI-------PKMLNWIILFKDSQDLNTP 559
+ +L + +ESLYA IH ++VEA+ P++ W +F TP
Sbjct: 660 MRTLVERILVQYVESLYA-------IHISIVEAVEHVMSKVPELQAWADVFLRP----TP 708
Query: 560 TVDF---GSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
D +G K L I+++ ++EE W+P YGLKG +DA+++V ++ + +P
Sbjct: 709 NADCMVEDRNGSKANLSINKLLEVEEHVWSPMYGLKGNVDATVQVAYNDGGDQ-KTLTIP 767
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
LE KTGK +S HRAQ LYTLL+S+RY + GLLYYL+ + + R +L+
Sbjct: 768 LEMKTGK---KDTSHSHRAQTSLYTLLLSDRYDIEVTFGLLYYLEMKKMFRIRGVRHELL 824
Query: 676 GLIMRRNEFANDIIKASTTQQLPPMLRAY--------------------GGNKECSGLGN 715
+I RN A I + LPPM++ GN E SGLG
Sbjct: 825 QMIQERNRLAGFIREK---MDLPPMIKRQHLCNQCYSKTACFVYHKLVDDGNGETSGLGQ 881
Query: 716 MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDA 775
FD + HL + H F + WDRL+ LE K+M + E+W + C S +V++
Sbjct: 882 KFDEVVGHLDSRHADFFQKWDRLLTLEEKDMMKFRRELWTMLSTEREPLGRCFSGVVIEP 941
Query: 776 SNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
+ ++ + NRF Y FV+ P P + ++ +G I ++S
Sbjct: 942 GSAYEDPSGSKINRFRYTFVKSKAP-PGFSFTESQITLGEPI---------------VIS 985
Query: 834 TESDRLAVASGLITEISRFHVSVSFSKPLRLP---------------------GRNSSSD 872
E A+A+G + +S +SV+ + L G+NSSS
Sbjct: 986 DEKGHFALANGYVVRVSPKRISVAVDRRLHNARVRCKEFDVERNQSFKGIMEVGQNSSSG 1045
Query: 873 --ADSLLHE-VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF--DSG 927
DS + V+R+DKDE + +R NLV L + S QLR++I++ + P F DS
Sbjct: 1046 LVEDSEEEQMVYRLDKDEFSNGMATIRNNLVSLMENFSLSIQLRKLILEGKTPEFKMDSS 1105
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
S+ D +S S+ +LN DQ++AI KV++AKDYALILGMPGTGKT+T+ H ++AL+ +
Sbjct: 1106 SL---DAIVSS--SQANLNIDQKQAIDKVMSAKDYALILGMPGTGKTTTIAHIIRALVSQ 1160
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKK 1046
G S+LLTSYT++AVDN+L+K+K+ +I +R+G VH E+Q+ L+A+ S+EE+K+
Sbjct: 1161 GKSVLLTSYTHTAVDNILLKIKNDNIRTLRLGAVAKVHPEVQQFVDLAAIPKKSIEELKE 1220
Query: 1047 RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
++ ++VA TCLGI +P+ ++ FD CI+DEA Q TLPV LGP+ A F+LVGDHYQL
Sbjct: 1221 SYERSEIVATTCLGINHPIFNERIFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQL 1280
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
PPLVQS A+E G+++SLF+ LS+ P +++ L+ QYRMC+ IM LSN LIY RL CG+
Sbjct: 1281 PPLVQSKAAQEGGLDVSLFKFLSDAQPSSVTNLEHQYRMCEEIMLLSNTLIYSGRLKCGN 1340
Query: 1167 DEIANAKIKVSDL-----------------------SSCSPWLKEALNPCRPVIFVNTDM 1203
+E+A+ +K+ + + WLK+ L+P VNTD
Sbjct: 1341 EEVASRSVKIPNFHDGIKNHHVTSVAEMTAGRCPGPTQARCWLKDLLDPSAKTRLVNTDT 1400
Query: 1204 LPAYEAKD--HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
L ++ L N EA L +I Q + + I ++IG+IT Y SQ +L+R SL
Sbjct: 1401 LSGRGPENLVGSRLTNTSEATLCVQIVQAFISSGISPREIGVITFYRSQLSLLRQSLRQY 1460
Query: 1262 S--VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
S +E+HT DK+QGRDK+ +++S VRS+ + + LL DWHRINVA TRA+ KL+++G
Sbjct: 1461 STELEMHTTDKFQGRDKEIVILSCVRSNNDKQ--VGDLLRDWHRINVAFTRARTKLLVIG 1518
Query: 1320 SCRTL 1324
S TL
Sbjct: 1519 SKSTL 1523
>gi|40882306|emb|CAF06129.1| related to DNA helicase [Neurospora crassa]
Length = 1735
Score = 615 bits (1587), Expect = e-173, Method: Compositional matrix adjust.
Identities = 381/1076 (35%), Positives = 583/1076 (54%), Gaps = 150/1076 (13%)
Query: 370 FLVLEVSEKNRPAD-----PVDAKSPYK--VLRLLNEQSGEERAVHLWEDWFHTVIAPGD 422
+LV V E + D P +SP++ +L + +++ R +HL DWF T +
Sbjct: 509 YLVTNVLESSYTDDRGRESPEKVESPFRQYILIVQADRTNSVRTIHLRGDWFDTPASVSA 568
Query: 423 TVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSIS 482
V++IG+F+DQGKC + N LI+HPD L+S T VA SFSC RR+VL +R+K +
Sbjct: 569 YVHIIGQFEDQGKCVLDNNQNMLILHPDQLISSTVVADSFSCMRRAVLQDRVKATSDLTP 628
Query: 483 ALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIP 541
AL+ GT+LH+IFQ L+ FL L+K++E LY V+ +D + +P
Sbjct: 629 ALVYGTILHEIFQEALVANKWDPAFLTNVINKTLEKHLEDLYILKVSMDDAKSHVQSKMP 688
Query: 542 KMLNWIILFKDSQDLNTPTVDFGSDGLKK-LKISEVTDIEEMAWAPKYGLKGMIDASIRV 600
++ +W LF SQ V G +G K + +S++ D+EE W+P YGLKG IDA+++V
Sbjct: 689 ELRSWAQLFVTSQPKPDAIVQ-GRNGDKATMCVSKLLDVEEHVWSPMYGLKGNIDATVQV 747
Query: 601 KIE--------SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID 652
+ SK + +P E KTGK N H+AQ LY LL+S+RY I
Sbjct: 748 TMRDPPARGSSSKAPTTKTLTVPFEVKTGKNVNSN----HQAQTALYNLLLSDRYDIEIV 803
Query: 653 SGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML-------RAYG 705
G+LYY+++ QT + R ++ +IM+RN+ A I + S QLPPM R Y
Sbjct: 804 YGILYYMETSQTLRIPAVRHEIRHMIMQRNQLACYIRERSV--QLPPMKKNKNACGRCYA 861
Query: 706 -------------GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE 752
G+ E S + FD ++HL+ H +F W+ L+ E KE Q ++ E
Sbjct: 862 QTTCFIYHKLADDGDGETSAMNEKFDEVVHHLSPTHKAFFLKWEELLTKEEKESQKLRRE 921
Query: 753 IWCSRGSGGNHFTGCLSSIVLD---ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
+W + C ++++++ A HQ+ + NRF Y F+++ P+P +
Sbjct: 922 LWTMISTEREKVGRCFANVIIEEGSAYENHQQMGKTNRFAYTFIKEK-PAPGFSF----- 975
Query: 810 LIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSV------------- 856
+D L G+ +++S E A+A G +T + + ++V
Sbjct: 976 ----------LDSQLTVGEPIVISDEQGHFALALGYVTSVRKTRIAVAVDRRLHNARVRQ 1025
Query: 857 ---------SFSKPLRLPGRNSSSDADSLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQS 906
+F+ +++PG ++ D V +R+DKDE + +R NLVQ+
Sbjct: 1026 PGFDEADNQTFASIMQVPGSGGNAPEDREAGPVRYRLDKDEFSNGMATVRNNLVQIMADG 1085
Query: 907 A-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALI 965
S Q+R ++VDLEAPRF + V +Q L S + LN DQ+ A+ KV++A+DYAL+
Sbjct: 1086 VLGSRQIRSLVVDLEAPRFKA--VPTQY-ILPSTASGQGLNVDQKAAVEKVMSAQDYALV 1142
Query: 966 LGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVH 1025
LGMPGTGKT+T+ H ++AL+ + ++LLTSYT++AVDN+L+KLK I +R+G VH
Sbjct: 1143 LGMPGTGKTTTIAHIIRALVAQKKTVLLTSYTHTAVDNILLKLKDDGIPILRLGPPVKVH 1202
Query: 1026 KEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
E+ L+ + S EI + + +VA TCLGI +P+ ++ FD CI+DEA Q TL
Sbjct: 1203 PEVPSFATLAGVPKTSFSEIHEAWNDTPIVATTCLGINHPVFAERIFDYCIVDEASQITL 1262
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
P+ LGP+ A KFVLVGDH QLPPLVQ+ EAR G+++SLF+ LSE+HPQ++ L+ QYR
Sbjct: 1263 PICLGPIRMARKFVLVGDHNQLPPLVQNEEARLGGLDVSLFKLLSEKHPQSVVNLEHQYR 1322
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD-------------------------- 1178
MC+ IM LSN LIY RL CG++ + +++ D
Sbjct: 1323 MCEDIMTLSNTLIYNGRLKCGTEALRTTSLEIPDMDALATKHFDADSFLAHSQQHPLKEG 1382
Query: 1179 --LSSC-SP-----WLKEALNPCRPVIFVNTDMLPAYEAKDH----QTLNNPVEACLIAK 1226
LS C SP WL++ L+P V F+NTD L + ++ Q + NP+E+ ++ +
Sbjct: 1383 DKLSFCPSPTPTTCWLRDLLDPSARVRFINTDSLLPHSREEKSTRGQRIVNPLESRIVCQ 1442
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSL-----------------SVSSVEIHTID 1269
+ L+ + +IG++T Y SQ L++H++ + +E+HT D
Sbjct: 1443 LVDSLLTVGVPASEIGVMTHYRSQLALLKHNMKNTLGGSAGAIRAGVKVAAEEIEMHTAD 1502
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK +++S VRS+E C+ LL DW RINVA TRAK KL++VGS TL
Sbjct: 1503 RFQGRDKSVVVLSLVRSNE---GCSIGELLKDWRRINVAFTRAKTKLLVVGSRETL 1555
>gi|406859104|gb|EKD12175.1| DNA replication factor Dna2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1710
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 373/1016 (36%), Positives = 556/1016 (54%), Gaps = 111/1016 (10%)
Query: 388 KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
K KVL L E S + V+L W T + V+VIG FD G+C + N LI+
Sbjct: 568 KQKEKVLILQVEHSKMTKVVNLRGIWIDTPVEQKAFVHVIGLFDSAGRCIIDDNVNLLIL 627
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKF 506
HPD L+S T VA SF C RR+VL +R+K + S + L+ GT+LH+IFQ+ +++ +++
Sbjct: 628 HPDHLISSTVVADSFGCTRRAVLQDRIKATSDSSAPLVYGTMLHEIFQSAMLENRWDIEW 687
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
L E +++E+LY + + L + ++ W LF SQ + V G+
Sbjct: 688 LGELVEKTALRHLEALYTIKIEVPQAVEYLRSKMAELQCWAELFVSSQPKSQAKVQAGNG 747
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI-ESKRNEINGMILPLEFKTGKIPN 625
+ +S++ D+EE W+P YGLKG IDA+++V + + KR + + +P E KTGK P
Sbjct: 748 ETVTMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMHDGKRQQT--LTVPFEVKTGKSP- 804
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S HRAQ LY LL+S+RY I G+LYY+++ +T + R +L +IM+RNE A
Sbjct: 805 ---SAAHRAQTALYNLLLSDRYDVEIAYGILYYMETSETIRIPAIRHELRHMIMQRNELA 861
Query: 686 NDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDSHIYHLT 725
+ + TT LP ML R Y GN E SGL FD + HL
Sbjct: 862 CFVREKHTT--LPTMLKKQNMCNRCYAKVPCFIYHKLADDGNGETSGLKGKFDEVVQHLG 919
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSY 783
H F WD L+ E KE + E+W S C S+++++ ++ E Q +
Sbjct: 920 PKHKEFFLKWDDLLTKEEKETLKFRRELWTMLSSEREKLGRCFSNVIIEPGSAYEEQNNP 979
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
+ NR+ Y V+ P P S DS I G+ +++S E A+A+
Sbjct: 980 KINRYRYSLVK---PDPPPGFSFLDSQIAV-------------GEPIVISDEKGHFALAN 1023
Query: 844 GLITEISRFHVSVSFSKPL-----RLPGRNSS------------------SDADSLLHEV 880
G +T + + V+V+ + L R PG + + DA+ + E
Sbjct: 1024 GYVTHVRKKRVTVAVDRRLHNARIRQPGFDEADNQVFASIMQVAPEGAVDEDAEGKIVEA 1083
Query: 881 ---WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+DKDE + +R NL+Q S ++R ++VDL APRF +P
Sbjct: 1084 PTRYRLDKDEFSNGMATVRNNLIQTMADGPFGSRKIRGLVVDLNAPRF------KMEPTA 1137
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
+ ++LN DQR AI+KV++A+DYAL+LGMPGTGKT+T+ H +K L+ +G ++LLTSY
Sbjct: 1138 FVVKDHENLNADQRNAILKVMSAEDYALVLGMPGTGKTTTIAHIIKTLVSQGKTVLLTSY 1197
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T++AVDN+L+KLK +I +R+G + E+Q+ L+ S EEI+ VVA
Sbjct: 1198 THTAVDNILLKLKDDNIPILRLGTIAKIAMEVQEFATLAVTTKTSFEEIRSAWHDTPVVA 1257
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TCLGI + + +++ FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLV + EA
Sbjct: 1258 TTCLGINHAIFSERTFDYCIVDEASQITLPVCLGPIRLAKTFILVGDHYQLPPLVANEEA 1317
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
R G++ISLF+ LS+ HP ++ L+ QYRMC+ +M LSN LIY L CGS E+AN+ IK
Sbjct: 1318 RVGGLDISLFKHLSDSHPSSVVNLEHQYRMCEDVMSLSNKLIYDGLLKCGSQEVANSTIK 1377
Query: 1176 VSDLSSC-----SP-------------------WLKEALNPCRPVIFVNTD-MLP-AYEA 1209
+ + + SP W+++ ++P V FVNTD +LP + E
Sbjct: 1378 IPTMDNLQNHHYSPSTLPLAPKSICPGSMRGRCWIRDLIDPSTKVSFVNTDPLLPLSREQ 1437
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTI 1268
+ NP EA + ++ + L+ + IGI+T Y SQ +L++ S+ + +E+HT
Sbjct: 1438 AKGNRIVNPTEAVVCTQLVESLLSVGVPAASIGIMTHYRSQLSLLKDSMRLHPDIEMHTA 1497
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
D++QGRDK+ I++S VRS+E LL DW RINVA TRAK KL+++GS TL
Sbjct: 1498 DRFQGRDKEVIVLSLVRSNEA--KSIGELLKDWRRINVAFTRAKTKLLVIGSKETL 1551
>gi|440631839|gb|ELR01758.1| hypothetical protein GMDG_00134 [Geomyces destructans 20631-21]
Length = 1673
Score = 613 bits (1582), Expect = e-172, Method: Compositional matrix adjust.
Identities = 372/1031 (36%), Positives = 567/1031 (54%), Gaps = 125/1031 (12%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E + E R + L + W T + V+VIG F G+C + +N LI+HPD
Sbjct: 586 KVLIVQVENTKEYRTIRLRDGWIETQVTEKAAVHVIGNFV-SGQCVIDDSHNLLILHPDH 644
Query: 452 LVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF C RR+VL +R+K + S + L+ GT+LH+IFQA +M +L +
Sbjct: 645 LISATVVADSFGCTRRAVLQDRVKATSDSSAPLVYGTILHEIFQAAMMANRWDSPWLHDL 704
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
+++E LY + + L + ++ +W +F S+ V G+
Sbjct: 705 IEKTATRHLEDLYTIKIQIPQAVEHLQSKMGELQSWAEVFVTSKRHPEAIVKAGNGETAT 764
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+ +S++ D+EE W+P YGLKG IDA+++V ++ + + +P E KTGK N
Sbjct: 765 MCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMQDAKTR-RTLTVPFEVKTGKNANAS--- 820
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LY LL+S+RY I G+LYY+++ +T + R +L +IM+RNE A + +
Sbjct: 821 -HRAQTALYNLLLSDRYDIDIAYGVLYYMETSETIRIPAIRHELRHMIMQRNELACFVRE 879
Query: 691 ASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
QLPPML R Y G+ E SG+ FD + HLT H
Sbjct: 880 RHA--QLPPMLKKENLCGRCYAKTTCFIYHKLADDGDGETSGIKGKFDEVVKHLTPQHKE 937
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRF 788
F WD L+ E KE + E+W S C S+++++ ++ E Q + + NRF
Sbjct: 938 FFLKWDDLLTKEEKESLKFRRELWTMLSSEREKLGRCFSNVIIEPGSAYEEQDNPKINRF 997
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y +RQ D I A+ ++ + G+ +++S E A+A+G +T
Sbjct: 998 RYTLIRQ------------DEAINASF----LESQITIGEPIVISDEKGHFALANGYVTH 1041
Query: 849 ISRFHVSVSFSKPL-----RLPGRNSSSD------------------ADSLLHEV---WR 882
+ + ++V+ + L R PG + +++ + + E +R
Sbjct: 1042 VRKHRITVAVDRRLHNARIRRPGFDEANNQVFASIMEVAGEGSPPESTEGKITEAPVRYR 1101
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE + +R N++QL + S +LR ++VDLEAP+F S A +Y+
Sbjct: 1102 LDKDEFSNGMATVRNNIIQLMADAPFMSRRLRSLVVDLEAPKFKS-------QATNYVLK 1154
Query: 942 EK-SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
++ S+N DQRRAI KV++A++YAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++A
Sbjct: 1155 DRESINIDQRRAIDKVMSAQNYALVLGMPGTGKTTTIAHIIQALVSQGKSVLLTSYTHTA 1214
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+KL+ I +R+G ++ ++Q+ L+A S EE+ + VVA TCL
Sbjct: 1215 VDNILLKLRDDKIPILRLGAAAKINTKVQEFAELAAKPRTSFEELGRLWHDTPVVATTCL 1274
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G+ + + +++ FD CI+DEA Q TLPV LGP+ A FVLVGDH QLPPLVQ+ AR G
Sbjct: 1275 GVNHAIFSERTFDYCIVDEASQITLPVCLGPIRMAHTFVLVGDHNQLPPLVQNEAARTGG 1334
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+++SLF+ LS+ HP A+ L+ QYRMC +M LSN LIY RL CG+ EIA I + ++
Sbjct: 1335 LDVSLFKLLSDAHPAAVVNLEHQYRMCAEVMALSNELIYSGRLKCGTPEIAARSISIPNM 1394
Query: 1180 SSC-----SP-------------------WLKEALNPCRPVIFVNTDML---PAYEAKDH 1212
++ SP W+++ L+P FVNTD L P EAK +
Sbjct: 1395 ANLQTHHFSPSTMSRAGKTICAAPAKGQCWIRDLLDPATKACFVNTDTLVPRPREEAKGN 1454
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKY 1271
+ + NP EA + +++ Q L+ + G +IG++T Y SQ L++H+L S VE+HT D++
Sbjct: 1455 RIV-NPTEATICSQLVQALLSVGVPGSEIGVMTHYRSQLALLKHNLRSHQEVEMHTCDRF 1513
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
QGRDK+ +++S VRS+E LL DW RINVA TRAK KL++VGS TL
Sbjct: 1514 QGRDKEVVVISLVRSNEA--GGIGELLRDWRRINVAFTRAKTKLLVVGSGSTL------- 1564
Query: 1332 LLINKVGEQSG 1342
K GE SG
Sbjct: 1565 ----KGGEGSG 1571
>gi|83764742|dbj|BAE54886.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1673
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 375/1058 (35%), Positives = 580/1058 (54%), Gaps = 116/1058 (10%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+++++E + + P KVL + +E++ +++AV L E WF + +++IG+
Sbjct: 562 YLIVDIAESTYTTEKGRLQ-PEKVLSVQDERTSQKKAVVLRESWFDSPCYKDSYIHLIGD 620
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTL 488
FD G C V N +I+HPD LVS T VA S C RR+VL +R+K + + G +
Sbjct: 621 FDTAGHCIVNNSYNMIILHPDHLVSATIVADSIGCQRRAVLQDRIKNTGDIGKPQVFGNI 680
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
H++FQ + + L +V+ K+IE LY ++ ++ ++ IP +++W
Sbjct: 681 FHEVFQEAMKANQWDISSLRSLVEMVIVKHIEELYLIHMSIPEVIDYVMGKIPALISWAD 740
Query: 549 LF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F K+ + D S L+ L I+++ ++EE W+P YGLKG IDA+++V
Sbjct: 741 TFLKEKPSAQSLVEDRNSSKLR-LSINKLLEVEEHIWSPMYGLKGNIDATVQVACHDGEG 799
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYYL++ + +
Sbjct: 800 NKN-LVVPLELKTG---NRDTNHAHRAQTALYTLLLSDRYDVEVTFGLLYYLETSKIFRI 855
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG--------------------GN 707
R +L+ +I RN A + + + QLPPM++ G+
Sbjct: 856 RGIRHELLQMIQARNRVAGYMCRRT---QLPPMVKRQALCNKCFSKTPCFIYHKLVDDGD 912
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG+ F + HLT F R WD L+ E + M K E+W S C
Sbjct: 913 GESSGLGDEFVKAMDHLTPRDSDFFRKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRC 972
Query: 768 LSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S+IV++ + E + + NR+ Y FV++ P L+ S +S L
Sbjct: 973 FSNIVIEPGSAFEDKDGVKINRYRYTFVKRQ---PTLSFSFSES-------------QLT 1016
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSV----------------------SFSKPLR 863
G+ +++S E A+A+G + ++S +SV +F +
Sbjct: 1017 VGEPIVISDEKGHFALANGYVVQVSPQRISVAVDRRLHNARTKSKGFDAKMNQTFRGIME 1076
Query: 864 LPGRNSSSDADSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDL 919
+PG +++S S E V+R+DKDE +++R NLV + + Q+ LRR+IV+
Sbjct: 1077 IPGADAASSNPSDEPEEEVVYRLDKDEFSNGMAIVRANLVAMMERDLFQAKNLRRLIVEG 1136
Query: 920 EAPRFDSGSVFSQDPALSYIWSE---KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
AP F Q +Y S+ SLN DQ+RAI KV++AKDYAL+LGMPGTGKT+T
Sbjct: 1137 SAPTF-------QPTLTAYKMSDTDRASLNVDQKRAIDKVMSAKDYALVLGMPGTGKTTT 1189
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSA 1035
+ H ++AL+ +G S+LLTSYT++AVDN+L+K++ +I +RIG VH E+Q+ L+A
Sbjct: 1190 IAHIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDNIRILRIGAAAKVHPEVQQFADLAA 1249
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+ N++EE++ + +VVA TCLGI + + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1250 VPKNTIEELQGAYEDSQVVATTCLGIGHSIFSQRIFDYCIVDEASQITLPVCLGPIRMAR 1309
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN
Sbjct: 1310 TFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPASVVNLEHQYRMCKDIMLLSNT 1369
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDL-----------------------SSCSPWLKEALNP 1192
LIY +L CG+ E+A ++V ++ S WL++ ++P
Sbjct: 1370 LIYSGQLKCGTQEVAARSLEVPNIGGLRHLHLDHFQPPGQRQLCLGTSQGRCWLRDLVDP 1429
Query: 1193 CRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
VNTD L PA + + NP EA L A++ + + I + IG+IT Y SQ
Sbjct: 1430 SAKTRLVNTDTLATPALDVAQGSRIVNPTEATLCAQLVEAFISCGIPARSIGVITFYRSQ 1489
Query: 1251 ANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
+L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW R+NVA
Sbjct: 1490 LSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRS--NSDNHVGDLLRDWRRVNVAF 1547
Query: 1309 TRAKKKLIMVGSCRTL-SKVPLLKLLINKVGEQSGILN 1345
TRA+ KL++VGS TL LL + V EQ + N
Sbjct: 1548 TRARTKLLVVGSKSTLRGGNELLGKYVKLVEEQGWVYN 1585
>gi|317138411|ref|XP_001816888.2| DNA replication helicase Dna2 [Aspergillus oryzae RIB40]
Length = 1671
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 375/1058 (35%), Positives = 580/1058 (54%), Gaps = 116/1058 (10%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+++++E + + P KVL + +E++ +++AV L E WF + +++IG+
Sbjct: 560 YLIVDIAESTYTTEKGRLQ-PEKVLSVQDERTSQKKAVVLRESWFDSPCYKDSYIHLIGD 618
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTL 488
FD G C V N +I+HPD LVS T VA S C RR+VL +R+K + + G +
Sbjct: 619 FDTAGHCIVNNSYNMIILHPDHLVSATIVADSIGCQRRAVLQDRIKNTGDIGKPQVFGNI 678
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
H++FQ + + L +V+ K+IE LY ++ ++ ++ IP +++W
Sbjct: 679 FHEVFQEAMKANQWDISSLRSLVEMVIVKHIEELYLIHMSIPEVIDYVMGKIPALISWAD 738
Query: 549 LF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F K+ + D S L+ L I+++ ++EE W+P YGLKG IDA+++V
Sbjct: 739 TFLKEKPSAQSLVEDRNSSKLR-LSINKLLEVEEHIWSPMYGLKGNIDATVQVACHDGEG 797
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYYL++ + +
Sbjct: 798 NKN-LVVPLELKTG---NRDTNHAHRAQTALYTLLLSDRYDVEVTFGLLYYLETSKIFRI 853
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG--------------------GN 707
R +L+ +I RN A + + + QLPPM++ G+
Sbjct: 854 RGIRHELLQMIQARNRVAGYMCRRT---QLPPMVKRQALCNKCFSKTPCFIYHKLVDDGD 910
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG+ F + HLT F R WD L+ E + M K E+W S C
Sbjct: 911 GESSGLGDEFVKAMDHLTPRDSDFFRKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRC 970
Query: 768 LSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S+IV++ + E + + NR+ Y FV++ P L+ S +S L
Sbjct: 971 FSNIVIEPGSAFEDKDGVKINRYRYTFVKRQ---PTLSFSFSES-------------QLT 1014
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSV----------------------SFSKPLR 863
G+ +++S E A+A+G + ++S +SV +F +
Sbjct: 1015 VGEPIVISDEKGHFALANGYVVQVSPQRISVAVDRRLHNARTKSKGFDAKMNQTFRGIME 1074
Query: 864 LPGRNSSSDADSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDL 919
+PG +++S S E V+R+DKDE +++R NLV + + Q+ LRR+IV+
Sbjct: 1075 IPGADAASSNPSDEPEEEVVYRLDKDEFSNGMAIVRANLVAMMERDLFQAKNLRRLIVEG 1134
Query: 920 EAPRFDSGSVFSQDPALSYIWSE---KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
AP F Q +Y S+ SLN DQ+RAI KV++AKDYAL+LGMPGTGKT+T
Sbjct: 1135 SAPTF-------QPTLTAYKMSDTDRASLNVDQKRAIDKVMSAKDYALVLGMPGTGKTTT 1187
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSA 1035
+ H ++AL+ +G S+LLTSYT++AVDN+L+K++ +I +RIG VH E+Q+ L+A
Sbjct: 1188 IAHIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDNIRILRIGAAAKVHPEVQQFADLAA 1247
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+ N++EE++ + +VVA TCLGI + + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1248 VPKNTIEELQGAYEDSQVVATTCLGIGHSIFSQRIFDYCIVDEASQITLPVCLGPIRMAR 1307
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN
Sbjct: 1308 TFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPASVVNLEHQYRMCKDIMLLSNT 1367
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDL-----------------------SSCSPWLKEALNP 1192
LIY +L CG+ E+A ++V ++ S WL++ ++P
Sbjct: 1368 LIYSGQLKCGTQEVAARSLEVPNIGGLRHLHLDHFQPPGQRQLCLGTSQGRCWLRDLVDP 1427
Query: 1193 CRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
VNTD L PA + + NP EA L A++ + + I + IG+IT Y SQ
Sbjct: 1428 SAKTRLVNTDTLATPALDVAQGSRIVNPTEATLCAQLVEAFISCGIPARSIGVITFYRSQ 1487
Query: 1251 ANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
+L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW R+NVA
Sbjct: 1488 LSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRS--NSDNHVGDLLRDWRRVNVAF 1545
Query: 1309 TRAKKKLIMVGSCRTL-SKVPLLKLLINKVGEQSGILN 1345
TRA+ KL++VGS TL LL + V EQ + N
Sbjct: 1546 TRARTKLLVVGSKSTLRGGNELLGKYVKLVEEQGWVYN 1583
>gi|226290188|gb|EEH45672.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 1524
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 368/1037 (35%), Positives = 572/1037 (55%), Gaps = 116/1037 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+L+++E N + P KVL + E++ RA+ L E WF T G +++IG
Sbjct: 388 YLILDLAE-NTYLNCKGQSRPQKVLFVEEEKTKINRAITLRESWFDTPCTKGSYIHLIGS 446
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTL 488
FD G+C V +N +I+HPD L+S T VA SF+C RR+VL +R+K SE + + G +
Sbjct: 447 FDPTGQCVVNNSDNIIILHPDHLLSATVVADSFTCQRRAVLQDRVKATSEANKPQVYGHI 506
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+IFQA + + +L E L++ +ESLY V+ + + L+ +P + +W
Sbjct: 507 LHEIFQAAMTANRWDLPWLREIISRTLERYVESLYEIRVDFPEAIEYLMSKMPSLRSWAD 566
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+F S+ ++ + ++ I+++ ++EE W+P YGLKG IDA+++V ++ + E
Sbjct: 567 MFVRSRPTTESIMEDRNGTSSRISINKLLEVEEHIWSPMYGLKGNIDATVQVVVQ-EGTE 625
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ +PLE KTG+ ++ HRAQ LYTLL+S+RY + G+LYYL+ +T V
Sbjct: 626 QKTLTVPLEVKTGR---NNTNEAHRAQTALYTLLLSDRYDIDVTFGILYYLEVTKTSRVR 682
Query: 669 VQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR-------AYG-------------GNK 708
R+++ +I +RN + + + T +LPPML+ Y G+
Sbjct: 683 AIRTEIRQMIQQRNRLSEFVCQ---TSKLPPMLKKPRICNQCYAKNACFTYHKIMDNGDG 739
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E S LGN F + HLT +H F + WD L+ +E +++ + E+W S C
Sbjct: 740 ETSELGNSFLEVVGHLTPSHQVFFKKWDALLTMEERDIMKFRRELWTMLSSEREAVGRCF 799
Query: 769 SSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
+I+++ ++ E + + NRF Y F + P+ N S GDS L
Sbjct: 800 GNIMVEPGSAYEETDAPKINRFRYTFFKHQPPA---NFSFGDS-------------QLSV 843
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE------- 879
GD +++S E A+A G +T ISR +SV+ + L R S+ D+ H+
Sbjct: 844 GDPIVVSDEKGHFALAGGYVTHISRKRISVTLDRRLH-NARTRRSNFDADRHQAFIGIME 902
Query: 880 --------------------VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVD 918
++R+DKDE + + +R NLV + + Q+ +LR +I+D
Sbjct: 903 IVETGGRESTISPEKAEDKNMYRLDKDEFSSGMATVRNNLVCMMDNTMLQAKRLRDVIID 962
Query: 919 LEAPRFD--SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
AP F S S S + LN DQ++AI KV++A DYAL+LGMPGTGKT+T
Sbjct: 963 GRAPSFKPTSSSTISS-------LANAELNVDQKQAINKVMSANDYALVLGMPGTGKTTT 1015
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSA 1035
+ H ++AL+ +G S+LLTSYT++AVDN+L+K+K +I +R+G +H ++QK L+A
Sbjct: 1016 IAHIIRALVSQGKSVLLTSYTHTAVDNILLKIKDDNIRTLRLGATTKIHPDVQKFADLAA 1075
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
++EE++ + VVA TCLGI +P+ ++ FD CI+DEA Q TLPV LGP+ A
Sbjct: 1076 TPKKTIEELRDIYENSLVVATTCLGINHPIFNNRTFDYCIVDEASQITLPVCLGPIRMAK 1135
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
F+LVGDHYQLPPLVQ EA+E G+++SLF+ L + P ++ L+ QYRMC+ IM LSN
Sbjct: 1136 AFILVGDHYQLPPLVQDKEAQEGGLDVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNT 1195
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSC---------------SP---------WLKEALN 1191
LIY L CG+ +A++ +K+ +LS SP W+++ L+
Sbjct: 1196 LIYSGHLKCGTPAVASSYLKILNLSGLKQHHVNSSSLPSNIRSPCLGSRYGHCWIRDLLD 1255
Query: 1192 PCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P VNTD L A E+ + N +EA L A++ + I +DIG+IT Y S
Sbjct: 1256 PVAKARLVNTDFLVPQAKESSKGSRIVNSIEATLCAQLVNSFISVGISARDIGVITLYRS 1315
Query: 1250 QANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q L++ +L + +E+HT D++QGRDK+ I++S VRS N L DW R+NVA
Sbjct: 1316 QLALLKQNLRHYLPDLEMHTADRFQGRDKEIIIMSCVRS--NSERNVGELFRDWRRVNVA 1373
Query: 1308 LTRAKKKLIMVGSCRTL 1324
TRAK KL+++GS TL
Sbjct: 1374 FTRAKTKLLIIGSKDTL 1390
>gi|261194643|ref|XP_002623726.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis SLH14081]
gi|239588264|gb|EEQ70907.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis SLH14081]
Length = 1575
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 364/1011 (36%), Positives = 560/1011 (55%), Gaps = 110/1011 (10%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
VL + E++ R + L E W+ T + G +++IG FD G+C V +N +I+HPD L
Sbjct: 464 VLFVQEEKTNNNRTITLRESWYDTPCSKGSYIHLIGSFDHMGRCVVDNSDNMIILHPDHL 523
Query: 453 VSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
+S T VA SF+CPRR+VL +R+K SE + + G +LH+IFQA +L E
Sbjct: 524 ISATVVADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDQSWLREII 583
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
L+ +ESLY V ++ + L+ IP + +W +F S+ + S L
Sbjct: 584 SRTLEHYVESLYEIQVEVSEATEYLMSKIPALSSWADIFMRSRPTIESITEDRSGTTSCL 643
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
I+++ ++EE W+P YGLKG +DA+++V ++ + E + +P E KTG+ S+
Sbjct: 644 SINKLLEVEEHIWSPMYGLKGNVDATVQVAVQ-EGTEKKTLTVPFELKTGR---NNSNEA 699
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
HRAQ LYTLL+S+RY + G+L+YL++ +T V RS++ +I +RN A I K
Sbjct: 700 HRAQTALYTLLVSDRYDIDVTFGILFYLEATKTFRVRAIRSEIRQMIQQRNRLAEFICKK 759
Query: 692 STTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCSF 731
S LPPML+ Y G+ E SG+G F + HLT +H +F
Sbjct: 760 S---DLPPMLKKARICNQCYAKDACFIYHKVMDDGDDESSGMGTSFIEIVGHLTPSHQNF 816
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDNRFV 789
+ WD L+ +E +++ + E+W + C +++++ + ++++ + NRF
Sbjct: 817 FKKWDALLTMEERDILKFRRELWTMLSNEREGVGRCFGNVMVEPGSAYEETGVPKINRFR 876
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
Y F + PS N S GDS L G+ +++S E A+A+G +T I
Sbjct: 877 YTFFKHQPPS---NFSFGDS-------------QLSVGEPIVVSDEKGHFALANGYVTHI 920
Query: 850 SRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------------VWR 882
SR +SV+ + L R S+ D+ H+ ++R
Sbjct: 921 SRTRISVAVDRRLH-NARTRCSNFDADRHQSFTGVMEIVETGGSESTVFPEKAEDTTLYR 979
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE + +R NLV + ++ Q+ +LR +I+D P F S S P L
Sbjct: 980 LDKDEFSNGMATVRNNLVCMMDRNTFQARRLRDLIIDGHIPLFKPPSS-SAIPCLP---- 1034
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
E LN DQ +AI KV++A DYALILGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++AV
Sbjct: 1035 ETELNIDQEQAIKKVMSANDYALILGMPGTGKTTTIAHIIRALISQGKSVLLTSYTHTAV 1094
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K+K +I +R+G +H ++QK L+A ++EE++ + ++VA TCLG
Sbjct: 1095 DNILLKVKDDNIRTLRLGATTKIHPDVQKFADLAATPKKTIEELRDIYENSRIVATTCLG 1154
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
I +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ EARE+G+
Sbjct: 1155 INHPIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKEARESGL 1214
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ L + P ++ L+ QYRMC+ IM LSN LIY L CG+ E+A + +K+ +L
Sbjct: 1215 DVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPEVAQSYLKIPNLG 1274
Query: 1180 -----------------SSC------SPWLKEALNPCRPVIFVNTDMLP--AYEAKDHQT 1214
+SC W+++ L+P VNTD L A E+
Sbjct: 1275 RLKQHHVDSLSLPPNVRNSCLGSRYGRCWIRDLLDPVARTRLVNTDPLEPQATESSKGSR 1334
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQG 1273
+ NP+EA + A++ + + I DIG++T Y SQ +L++ +L +E+HT D++QG
Sbjct: 1335 IINPIEATICAQLVESFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADRFQG 1394
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
RDK+ I++S VRS N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1395 RDKEIIIMSCVRS--NSERNVGELLRDWRRVNVAFTRARTKLLIVGSKNTL 1443
>gi|239613455|gb|EEQ90442.1| DNA replication helicase Dna2 [Ajellomyces dermatitidis ER-3]
Length = 1575
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 364/1011 (36%), Positives = 560/1011 (55%), Gaps = 110/1011 (10%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
VL + E++ R + L E W+ T + G +++IG FD G+C V +N +I+HPD L
Sbjct: 464 VLFVQEEKTNNNRTITLRESWYDTPCSKGSYIHLIGSFDHMGRCLVDNSDNMIILHPDHL 523
Query: 453 VSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
+S T VA SF+CPRR+VL +R+K SE + + G +LH+IFQA +L E
Sbjct: 524 ISATVVADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDQSWLREII 583
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
L+ +ESLY V ++ + L+ IP + +W +F S+ + S L
Sbjct: 584 SRTLEHYVESLYEIQVEVSEATEYLMSKIPALSSWADIFMRSRPTIESITEDRSGTTSCL 643
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
I+++ ++EE W+P YGLKG +DA+++V ++ + E + +P E KTG+ S+
Sbjct: 644 SINKLLEVEEHIWSPMYGLKGNVDATVQVAVQ-EGTEKKTLTVPFELKTGR---NNSNEA 699
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
HRAQ LYTLL+S+RY + G+L+YL++ +T V RS++ +I +RN A I K
Sbjct: 700 HRAQTALYTLLVSDRYDIDVTFGILFYLEATKTFRVRAIRSEIRQMIQQRNRLAEFICKK 759
Query: 692 STTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCSF 731
S LPPML+ Y G+ E SG+G F + HLT +H +F
Sbjct: 760 S---DLPPMLKKARICNQCYAKDACFIYHKVMDDGDDESSGMGTSFIEIVGHLTPSHQNF 816
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDNRFV 789
+ WD L+ +E +++ + E+W + C +++++ + ++++ + NRF
Sbjct: 817 FKKWDALLTMEERDILKFRRELWTMLSNEREGVGRCFGNVMVEPGSAYEETGVPKINRFR 876
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
Y F + PS N S GDS L G+ +++S E A+A+G +T I
Sbjct: 877 YTFFKHQPPS---NFSFGDS-------------QLSVGEPIVVSDEKGHFALANGYVTHI 920
Query: 850 SRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------------VWR 882
SR +SV+ + L R S+ D+ H+ ++R
Sbjct: 921 SRTRISVAVDRRLH-NARTRCSNFDADRHQSFTGVMEIVETGGSESTVFPEKAEDTTLYR 979
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE + +R NLV + ++ Q+ +LR +I+D P F S S P L
Sbjct: 980 LDKDEFSNGMATVRNNLVCMMDRNTFQARRLRDLIIDGHIPLFKPTSS-SAIPCLP---- 1034
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
E LN DQ +AI KV++A DYALILGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++AV
Sbjct: 1035 ETELNIDQEQAIKKVMSANDYALILGMPGTGKTTTIAHIIRALISQGKSVLLTSYTHTAV 1094
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K+K +I +R+G +H ++QK L+A ++EE++ + ++VA TCLG
Sbjct: 1095 DNILLKVKDDNIRTLRLGATTKIHPDVQKFADLAATPKKTIEELRDIYENSRIVATTCLG 1154
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
I +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ EARE+G+
Sbjct: 1155 INHPIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKEARESGL 1214
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ L + P ++ L+ QYRMC+ IM LSN LIY L CG+ E+A + +K+ +L
Sbjct: 1215 DVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPEVAQSYLKIPNLG 1274
Query: 1180 -----------------SSC------SPWLKEALNPCRPVIFVNTDMLP--AYEAKDHQT 1214
+SC W+++ L+P VNTD L A E+
Sbjct: 1275 RLKQHHVDSLSLPPNVRNSCLGSRYGRCWIRDLLDPVARTRLVNTDPLEPQATESSKGSR 1334
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQG 1273
+ NP+EA + A++ + + I DIG++T Y SQ +L++ +L +E+HT D++QG
Sbjct: 1335 IINPIEATICAQLVESFISVGIPAGDIGVVTLYRSQLSLLKQNLRHHPDLEMHTADRFQG 1394
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
RDK+ I++S VRS N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1395 RDKEIIIMSCVRS--NSERNVGELLRDWRRVNVAFTRARTKLLIVGSKNTL 1443
>gi|164426014|ref|XP_960282.2| hypothetical protein NCU04749 [Neurospora crassa OR74A]
gi|157071165|gb|EAA31046.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1695
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 373/1046 (35%), Positives = 570/1046 (54%), Gaps = 143/1046 (13%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
+L + +++ R +HL DWF T + V++IG+F+DQGKC + N LI+HPD L
Sbjct: 499 ILIVQADRTNSVRTIHLRGDWFDTPASVSAYVHIIGQFEDQGKCVLDNNQNMLILHPDQL 558
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYA 511
+S T VA SFSC RR+VL +R+K + AL+ GT+LH+IFQ L+ FL
Sbjct: 559 ISSTVVADSFSCMRRAVLQDRVKATSDLTPALVYGTILHEIFQEALVANKWDPAFLTNVI 618
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK- 570
L+K++E LY V+ +D + +P++ +W LF SQ V G +G K
Sbjct: 619 NKTLEKHLEDLYILKVSMDDAKSHVQSKMPELRSWAQLFVTSQPKPDAIVQ-GRNGDKAT 677
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE--------SKRNEINGMILPLEFKTGK 622
+ +S++ D+EE W+P YGLKG IDA+++V + SK + +P E KTGK
Sbjct: 678 MCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDPPARGSSSKAPTTKTLTVPFEVKTGK 737
Query: 623 IPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRN 682
N H+AQ LY LL+S+RY I G+LYY+++ QT + R ++ +IM+RN
Sbjct: 738 NVNSN----HQAQTALYNLLLSDRYDIEIVYGILYYMETSQTLRIPAVRHEIRHMIMQRN 793
Query: 683 EFANDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDSHIY 722
+ A I + S QLPPM R Y G+ E S + FD ++
Sbjct: 794 QLACYIRERSV--QLPPMKKNKNACGRCYAQTTCFIYHKLADDGDGETSAMNEKFDEVVH 851
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD---ASNEH 779
HL+ H +F W+ L+ E KE Q ++ E+W + C ++++++ A H
Sbjct: 852 HLSPTHKAFFLKWEELLTKEEKESQKLRRELWTMISTEREKVGRCFANVIIEEGSAYENH 911
Query: 780 QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
Q+ + NRF Y F+++ P+P + +D L G+ +++S E
Sbjct: 912 QQMGKTNRFAYTFIKEK-PAPGFSF---------------LDSQLTVGEPIVISDEQGHF 955
Query: 840 AVASGLITEISRFHVSV----------------------SFSKPLRLPGRNSSSDADSLL 877
A+A G +T + + ++V +F+ +++PG ++ D
Sbjct: 956 ALALGYVTSVRKTRIAVAVDRRLHNARVRQPGFDEADNQTFASIMQVPGSGGNAPEDREA 1015
Query: 878 HEV-WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPA 935
V +R+DKDE + +R NLVQ+ S Q+R ++VDLEAPRF + V +Q
Sbjct: 1016 GPVRYRLDKDEFSNGMATVRNNLVQIMADGVLGSRQIRSLVVDLEAPRFKA--VPTQY-I 1072
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
L S + LN DQ+ A+ KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ + ++LLTS
Sbjct: 1073 LPSTASGQGLNVDQKAAVEKVMSAQDYALVLGMPGTGKTTTIAHIIRALVAQKKTVLLTS 1132
Query: 996 YTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVV 1054
YT++AVDN+L+KLK I +R+G VH E+ L+ + S EI + + +V
Sbjct: 1133 YTHTAVDNILLKLKDDGIPILRLGPPVKVHPEVPSFATLAGVPKTSFSEIHEAWNDTPIV 1192
Query: 1055 AVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
A TCLGI +P+ ++ FD CI+DEA Q TLP+ LGP+ A KFVLVGDH QLPPLVQ+ E
Sbjct: 1193 ATTCLGINHPVFAERIFDYCIVDEASQITLPICLGPIRMARKFVLVGDHNQLPPLVQNEE 1252
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
AR G+++SLF+ LSE+HPQ++ L+ QYRMC+ IM LSN LIY RL CG++ + +
Sbjct: 1253 ARLGGLDVSLFKLLSEKHPQSVVNLEHQYRMCEDIMTLSNTLIYNGRLKCGTEALRTTSL 1312
Query: 1175 KVSD----------------------------LSSC-SP-----WLKEALNPCRPVIFVN 1200
++ D LS C SP WL++ L+P V F+N
Sbjct: 1313 EIPDMDALATKHFDADSFLAHSQQHPLKEGDKLSFCPSPTPTTCWLRDLLDPSARVRFIN 1372
Query: 1201 TDMLPAYEAKDH----QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
TD L + ++ Q + NP+E+ ++ ++ L+ + +IG++T Y SQ L++H
Sbjct: 1373 TDSLLPHSREEKSTRGQRIVNPLESRIVCQLVDSLLTVGVPASEIGVMTHYRSQLALLKH 1432
Query: 1257 SL-----------------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLL 1298
++ + +E+HT D++QGRDK +++S VRS+E C+ LL
Sbjct: 1433 NMKNTLGGSAGAIRAGVKVAAEEIEMHTADRFQGRDKSVVVLSLVRSNE---GCSIGELL 1489
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTL 1324
DW RINVA TRAK KL++VGS TL
Sbjct: 1490 KDWRRINVAFTRAKTKLLVVGSRETL 1515
>gi|156053429|ref|XP_001592641.1| hypothetical protein SS1G_06882 [Sclerotinia sclerotiorum 1980]
gi|154704660|gb|EDO04399.1| hypothetical protein SS1G_06882 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1559
Score = 611 bits (1575), Expect = e-171, Method: Compositional matrix adjust.
Identities = 367/1015 (36%), Positives = 561/1015 (55%), Gaps = 110/1015 (10%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L L E+S +R VHL W T + V++IG+FD QG C + + +I+HP
Sbjct: 527 PEKILFLQPERSKVKRMVHLRGTWIDTPVTMKAFVHIIGKFDSQGICIIDDNSGLIILHP 586
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S VA SF C RR+VL +R+K + E S + L GT+LH+IFQA ++ +FL
Sbjct: 587 DHLISALVVADSFGCTRRAVLQDRVKATGEASPAMLYGTILHEIFQAAMLANRWDTRFLG 646
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E + Q+++E LY V + L + ++ W LF SQ V +
Sbjct: 647 ELIDKLAQRHLEDLYVIKVEIPQAVEYLHSKMGELQAWAELFVSSQPKPEALVKASNGDS 706
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ +S + D+EE W+P YGLKG IDA++++ + ++ E + PLE KTGK P
Sbjct: 707 VAMCVSNLLDVEEHVWSPMYGLKGNIDATVQITMRDEKGE-RTLTAPLEVKTGKNP---- 761
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
S+ +RAQ LY LL+S+RY I G+LYY+++ +T + R +L +IM+RNE A +
Sbjct: 762 SIANRAQTALYNLLISDRYDVEIAYGILYYMETSETIRIPAIRHELRHMIMQRNELACFV 821
Query: 689 IKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
+ + QLPPML R Y GN E SG+ FD + HLT H
Sbjct: 822 REKNA--QLPPMLKKENMCGRCYAKNTCFIYHKLADDGNGETSGMKEKFDEVVKHLTPKH 879
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQ--KSYRDN 786
F WD L+ E K+ + E+W S C S++V++ + ++ + + N
Sbjct: 880 KEFFLKWDDLLTKEEKDSLKFRRELWTMLSSEREKLGRCFSNVVIEEGSAYEDLNNEKIN 939
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
R+ Y ++ P + + G S MD + G+ +++S E A+A G +
Sbjct: 940 RYRYTMIK-----PKNSTTPGFSF---------MDSQIIVGEPIVISDEKGHFALAKGYV 985
Query: 847 TEISRFHVSVSFSKPL-----RLPGRN----------------SSSDADSL--LHE---V 880
T + + ++V+ + L R PG + S+ ADS+ + E +
Sbjct: 986 TNVRKNRITVAVDRRLHNARIRQPGFDETNNQVFASIMEVAAEGSTPADSIGKIKEDPIL 1045
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+DKDE + +R NL+Q+ + S ++R ++VDL APRF S Y
Sbjct: 1046 YRLDKDEFSNGLATVRNNLIQIMTEGPFGSREIRGLVVDLNAPRFKPHST-------QYT 1098
Query: 940 WSEKS-LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
++S +N DQRRAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT+
Sbjct: 1099 LKDRSSINVDQRRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTH 1158
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+KL+ SI +R+G +H ++Q+ A++ ++EEI+ ++A +
Sbjct: 1159 TAVDNILLKLRDDSIPILRLGAKAKIHPDVQEFAKLAIDPKETMEEIRSVWHGTPIIATS 1218
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ ++ FD CI+DEA Q TLPV +GP+ A F+LVGDH QLPPLV+ EAR+
Sbjct: 1219 CLGINHPIFNERTFDYCIVDEASQITLPVCVGPIRLARTFILVGDHNQLPPLVKDEEARK 1278
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G++ISLF+ LS+ HPQ++ L+ QYRM +M LSN LIY RL CGS+ +A KI +
Sbjct: 1279 GGLDISLFKYLSDAHPQSVVYLEHQYRMNADVMALSNTLIYNGRLKCGSESVATRKIIIP 1338
Query: 1178 DLSSCSP-------------------------WLKEALNPCRPVIFVNTDMLP--AYEAK 1210
++ + WL++ L+P V FV+TD L A E++
Sbjct: 1339 EMDALKAHHHTPSSILHSTQKSICLEPKKGRCWLRDLLDPDVTVAFVDTDGLGEIARESE 1398
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTID 1269
N VEA ++ ++ L+ ++ +IG++T Y SQ L++ SL + VE+HT D
Sbjct: 1399 KGNRTVNDVEAKIVTQLVTSLISVGVDPTEIGVMTHYRSQLALLKDSLRTAKGVEMHTAD 1458
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK+ ++S VRS+E LL DW RINVA TRAK KL++VGS TL
Sbjct: 1459 RFQGRDKEVTILSLVRSNEA--GNIGELLKDWRRINVAFTRAKTKLLVVGSRGTL 1511
>gi|391863258|gb|EIT72569.1| DNA replication helicase [Aspergillus oryzae 3.042]
Length = 1670
Score = 610 bits (1574), Expect = e-171, Method: Compositional matrix adjust.
Identities = 376/1059 (35%), Positives = 579/1059 (54%), Gaps = 118/1059 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+++++E + + P KVL + +E++ +++ V L E WF + +++IG+
Sbjct: 559 YLIVDIAESTYTTEKGRLQ-PEKVLSVQDERTSQKKVVVLRESWFDSPCYKDSYIHLIGD 617
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTL 488
FD G C V N +I+HPD LVS T VA S C RR+VL +R+K + + G +
Sbjct: 618 FDTAGHCIVNNSYNMIILHPDHLVSATIVADSIGCQRRAVLQDRIKNTGDIGKPQVFGNI 677
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
H++FQ + + L +V+ K+IE LY ++ + ++ IP +++W
Sbjct: 678 FHEVFQEAMKANQWDIFSLRSLVEMVIVKHIEELYLIHMSIPEAIDYVMGKIPALISWAD 737
Query: 549 LF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F K+ + D S L+ L I+++ ++EE W+P YGLKG IDA+++V
Sbjct: 738 TFLKEKPSAQSLVEDRNSSKLR-LSINKLLEVEEHIWSPMYGLKGNIDATVQVACHDGEG 796
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYYL++ + +
Sbjct: 797 NKN-LVVPLELKTG---NRDTNHAHRAQTALYTLLLSDRYDVEVTFGLLYYLETSKIFRI 852
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG--------------------GN 707
R +L+ +I RN A + + + QLPPM++ G+
Sbjct: 853 RGIRHELLQMIQARNRVAGYMCRRT---QLPPMVKRQALCNKCFSKTPCFIYHKLVDDGD 909
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG+ F + HLT F R WD L+ E + M K E+W S C
Sbjct: 910 GESSGLGDEFVKAMDHLTPRDSDFFRKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRC 969
Query: 768 LSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S+IV++ + E + + NR+ Y FV++ P L+ S +S L
Sbjct: 970 FSNIVIEPGSAFEDKDGVKINRYRYTFVKRQ---PTLSFSFSES-------------QLT 1013
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSV----------------------SFSKPLR 863
G+ +++S E A+A+G + ++S +SV +F +
Sbjct: 1014 VGEPIVISDEKGHFALANGYVVQVSPQRISVAVDRRLHNARTKSKGFDAKMNQTFRGIME 1073
Query: 864 LPGRNSSSDADSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDL 919
+PG +++S S E V+R+DKDE +++R NLV + + Q+ LRR+IV+
Sbjct: 1074 IPGADAASSNSSNEPEEEVVYRLDKDEFSNGMAIVRANLVAMMERDLFQAKNLRRLIVEG 1133
Query: 920 EAPRFDSGSVFSQDPALS-YIWSE---KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
AP F P LS Y S+ SLN DQ+RAI KV++AKDYAL+LGMPGTGKT+
Sbjct: 1134 SAPTFQ--------PTLSAYKMSDTDRASLNVDQKRAIDKVMSAKDYALVLGMPGTGKTT 1185
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LS 1034
T+ H ++AL+ +G S+LLTSYT++AVDN+L+K++ +I +RIG VH E+Q+ L+
Sbjct: 1186 TIAHIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDNIRILRIGAAAKVHPEVQQFADLA 1245
Query: 1035 AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
A+ N++EE++ + +VVA TCLGI + + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1246 AVPKNTIEELQGAYEDSQVVATTCLGIGHSVFSQRIFDYCIVDEASQITLPVCLGPIRMA 1305
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN
Sbjct: 1306 RTFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPASVVNLEHQYRMCKDIMLLSN 1365
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDL-----------------------SSCSPWLKEALN 1191
LIY +L CG+ E+A ++V ++ S WL++ ++
Sbjct: 1366 TLIYSGQLKCGTQEVAARSLEVPNIGGLRHLHLDHFQPPGQRQLCLGTSQGRCWLRDLVD 1425
Query: 1192 PCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P VNTD L PA + + NP EA L A++ + + I + IG+IT Y S
Sbjct: 1426 PSAKTRLVNTDTLATPALDVAQGSRIVNPTEATLCAQLVEAFISCGIPARSIGVITFYRS 1485
Query: 1250 QANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q +L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW R+NVA
Sbjct: 1486 QLSLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRS--NSDNHVGDLLRDWRRVNVA 1543
Query: 1308 LTRAKKKLIMVGSCRTL-SKVPLLKLLINKVGEQSGILN 1345
TRA+ KL++VGS TL LL + V EQ + N
Sbjct: 1544 FTRARTKLLVVGSKSTLRGGNELLGKYVKLVEEQGWVYN 1582
>gi|451999342|gb|EMD91805.1| hypothetical protein COCHEDRAFT_1194543 [Cochliobolus heterostrophus
C5]
Length = 1663
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 373/1075 (34%), Positives = 584/1075 (54%), Gaps = 132/1075 (12%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E + D + P KVL + E++ +A+ L + WF T G V+VIGE
Sbjct: 514 YLVKRVDESSYTTD-RGYQMPEKVLMVEEEKTKLFKAIILRQAWFDTPCTTGSFVHVIGE 572
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F G+C V NN LI+HPD L+S T VA SF C RR+VL +R+K + R+ + +L GTL
Sbjct: 573 FTSGGQCVVDDHNNMLILHPDHLISSTVVADSFGCLRRAVLQDRVKATSRANAPMLYGTL 632
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH++FQ + FL E +L ++E++ D+ + + +P++ W
Sbjct: 633 LHELFQEAIKVNKWDTAFLLETIEKLLPSHMETILEINSTCEDVKEHMSSKLPELQAWAK 692
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+F ++ V + + I+++ D+EE W+P YGLKG IDA+++V + + E
Sbjct: 693 IFVCAEPQADAVVRERNGRQCTMSINKLLDVEEHVWSPMYGLKGNIDATVQVTMRDDQGE 752
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ +P E KTGK S+ H AQ LY LL+S RY +I G+LYYL++ +
Sbjct: 753 -RTLTVPFEVKTGK---NSSNAAHVAQTALYNLLLSNRYDVNIAYGILYYLETSDISRIP 808
Query: 669 VQRSDLVGLIMRRNEFA---NDIIKASTTQQLPPMLRAYGGNKEC--------------S 711
R+D++ +I++RNE A D I LPP+L+ ++C
Sbjct: 809 AIRNDIIHMIIKRNELACYVRDRI------DLPPVLKEDFKCQKCYAQEACFLYHNLVEE 862
Query: 712 GLGNM--------FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNH 763
G G+M +D + L +H F++ WD L+ E +M + E+W +
Sbjct: 863 GKGDMLNKKAKERYDELVAPLQPSHREFMKKWDTLLTKEETDMMKFRRELWTMLSTEREK 922
Query: 764 FTGCLSSIVLDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD 821
C S+++++ + E + + + NR+ Y F++Q P+P + ++ ++G I
Sbjct: 923 LGRCFSNVIMEPGSGFEEKNAQKINRYSYTFIKQQ-PTPGFSFTESQLIVGEPI------ 975
Query: 822 CTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSSSDAD-S 875
++S E A+A+G +T + + ++V+ + L +LPG NS ++ +
Sbjct: 976 ---------VVSDEQGHFALANGYVTNVHKRRITVAVDRRLHNSRTKLPGFNSQTNQTFA 1026
Query: 876 LLHEV------------------WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMI 916
+ EV +R+DKDE + R NL+Q+ + ++ LR +I
Sbjct: 1027 GIMEVTKEGETAAKYEADEEPVLYRLDKDEFSNGMAAARNNLIQIMDNNVFKAHDLRALI 1086
Query: 917 VDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
VD AP F S P + S+ S+N DQR A+ KV+ AKDYAL+LGMPGTGKT+T
Sbjct: 1087 VDGRAPAFKS---IKDAPPMPE-SSQMSMNSDQRAAVSKVMCAKDYALVLGMPGTGKTTT 1142
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSA 1035
+ H ++ L+ +G S+LLTSYT++AVDN+L+K++ I +R+G + +H E+++ L+A
Sbjct: 1143 IAHIIRTLVAQGKSVLLTSYTHTAVDNILLKIRDDKIAILRLGAAKKIHPEVREFATLAA 1202
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
SV+E+++ Q VVA TCL I +P+ + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1203 EPKESVDELERSWMQPPVVATTCLTINHPIFSRRVFDYCIVDEASQITLPVCLGPIRMAQ 1262
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
KF+LVGDHYQLPPLVQ+ EA E G+++SLF+ L E HPQA+ +L+ QYRMC +M LSN
Sbjct: 1263 KFILVGDHYQLPPLVQNKEAMEGGLDVSLFKLLCEAHPQAVVSLEHQYRMCADVMLLSNR 1322
Query: 1156 LIYGDRLSCGSDEIANAKIKV------------------SDLSSCSP------WLKEALN 1191
IY RL CG+ +A +K+ S + SC+ WL +L+
Sbjct: 1323 FIYSGRLKCGTTAVATRTLKLPKPNGLMAYHHRLQQSRFSAVQSCAGPDAAHCWLSRSLS 1382
Query: 1192 PCRPVIFVNTDML-PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
P +PV+F+NTD++ P E + + N +EA L++++T L+ + +IGII Y SQ
Sbjct: 1383 PDQPVVFINTDLISPILETQAGPRITNALEARLVSQLTVSLLSLGVVVDEIGIIAFYRSQ 1442
Query: 1251 ANLIRHSLSV--------------------SSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
L+R L+ + VE+HT DK+QGRDK+ ++VS VRS+EN
Sbjct: 1443 LALLRQGLAAAYTQTQSSELSAPAISRQGCAGVELHTADKFQGRDKEVVIVSCVRSNEN- 1501
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL D RINVALTRA+ KLI++GS +TLS LL+ ++ E+ +L+
Sbjct: 1502 -GVVGDLLKDRRRINVALTRARSKLIILGSEKTLSSNELLRDMVALCREKDWVLD 1555
>gi|336276628|ref|XP_003353067.1| hypothetical protein SMAC_03385 [Sordaria macrospora k-hell]
Length = 1750
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 372/1049 (35%), Positives = 568/1049 (54%), Gaps = 143/1049 (13%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L + +++ R ++L DWF T + V++IGEF+DQGKC V N LI+HP
Sbjct: 522 PEKILIVQADRTNSVRTIYLRGDWFDTPASVSAYVHIIGEFEDQGKCIVDNNQNMLILHP 581
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SFSC RR+VL +R+K S+ S + + GT+LH+IFQ L+ FL
Sbjct: 582 DQLISSTVVADSFSCMRRAVLQDRVKATSDLSPALVYGTILHEIFQEALVANKWDPAFLT 641
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
L+K++E LY V+ +D + +P++ +W LF SQ V G +G
Sbjct: 642 NVINKTLEKHLEDLYILKVSMDDAKSHVQSKMPELRSWAQLFVTSQPKPDAIVQ-GRNGD 700
Query: 569 K-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE--------SKRNEINGMILPLEFK 619
K + +S++ D+EE W+P YGLKG IDA+++V + SK + + +P E K
Sbjct: 701 KVTMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDPPARGSGSKASTTKTLTVPFEVK 760
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N H+AQ LY LL+S+RY I G+LYY+++ QT + R ++ +IM
Sbjct: 761 TGKNVNSN----HQAQTALYNLLLSDRYDIEIVYGILYYMETSQTLRIPAVRHEIRHMIM 816
Query: 680 RRNEFANDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDS 719
+RN+ A I + S T LPPM R Y G+ E S + FD
Sbjct: 817 QRNQLACYIRERSVT--LPPMKKNKNACGRCYAQTTCFIYHKLADDGDGETSAMNEKFDE 874
Query: 720 HIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD---AS 776
+ HL H F W+ L+ E KE Q ++ E+W + C ++++++ A
Sbjct: 875 AVQHLNPIHKEFFLKWEELLTKEEKESQKLRRELWTMISTEREKVGRCFANVIIEEGSAY 934
Query: 777 NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
HQ+ + NRF Y F+++ P P + +D L G+ +++S E
Sbjct: 935 ENHQQMGKTNRFAYTFIKEK-PPPGFSF---------------LDSQLTVGEPIVISDEQ 978
Query: 837 DRLAVASGLITEISRFHVSVS----------------------FSKPLRLPGRNSSSDAD 874
A+A G +T + + ++V+ F+ +++PG ++ D
Sbjct: 979 GHFALALGYVTSVRKTRIAVAVDRRLHNARVRQPGFNEADNQVFASIMQVPGSGDNTPED 1038
Query: 875 SLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQ 932
+ V +R+DKDE + +R NLVQ+ S Q+RR++V L+APRF
Sbjct: 1039 AEAGPVRYRLDKDEFSNGMATVRNNLVQVMADGVLGSRQIRRLVVGLDAPRFRDAPTQYM 1098
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
P+ + S + LN DQ+ A+ KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ + ++L
Sbjct: 1099 LPSTA---SGQGLNVDQKAAVQKVMSAQDYALVLGMPGTGKTTTIAHIIRALVAQKKTVL 1155
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQV 1051
LTSYT++AVDN+L+KLK I +R+G VH E+ L+ + S EI + +
Sbjct: 1156 LTSYTHTAVDNILLKLKDDGIPILRLGPPVKVHPEVPSFATLAGVPKTSFSEIHEAWNDT 1215
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
+VA TCLGI +P+ ++ FD CI+DEA Q TLP+ LGP+ A KFVLVGDH QLPPLVQ
Sbjct: 1216 PIVATTCLGINHPVFAERIFDYCIVDEASQITLPICLGPIRMARKFVLVGDHNQLPPLVQ 1275
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
+ EAR G+++SLF+ LS++HPQ++ L+ QYRMC+ IM LSN LIY RL CG++ +
Sbjct: 1276 NEEARLGGLDVSLFKLLSKKHPQSVVNLEHQYRMCEDIMTLSNTLIYNGRLKCGTEALRT 1335
Query: 1172 AKIKVSD----------------------------LSSC---SP---WLKEALNPCRPVI 1197
+++ + LS C SP WL++ L+P V
Sbjct: 1336 TSLEIPNMDALETKHFDAESFLAHSQQTTLKEGDRLSFCPSPSPTTCWLRDLLDPSARVR 1395
Query: 1198 FVNTDMLPAYEAKDH----QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
F+NTD L + ++ Q + NP+E+ ++ ++ L+ + +IG++T Y SQ L
Sbjct: 1396 FINTDSLLPHSREEKSTRGQRIINPLESRIVCQLVDSLLTVGVPASEIGVMTHYRSQLAL 1455
Query: 1254 IRHSL-----------------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-S 1295
++H+L +E+HT D++QGRDK +++S VRS+E C+
Sbjct: 1456 LKHNLKNTLGGSAGAIRAGVKVGAEEIEMHTADRFQGRDKSVVVLSLVRSNEG---CSIG 1512
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
LL DW RINVA TRAK KL++VGS TL
Sbjct: 1513 ELLKDWRRINVAFTRAKTKLLVVGSRETL 1541
>gi|380092552|emb|CCC09829.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1750
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 372/1049 (35%), Positives = 568/1049 (54%), Gaps = 143/1049 (13%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L + +++ R ++L DWF T + V++IGEF+DQGKC V N LI+HP
Sbjct: 522 PEKILIVQADRTNSVRTIYLRGDWFDTPASVSAYVHIIGEFEDQGKCIVDNNQNMLILHP 581
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SFSC RR+VL +R+K S+ S + + GT+LH+IFQ L+ FL
Sbjct: 582 DQLISSTVVADSFSCMRRAVLQDRVKATSDLSPALVYGTILHEIFQEALVANKWDPAFLT 641
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
L+K++E LY V+ +D + +P++ +W LF SQ V G +G
Sbjct: 642 NVINKTLEKHLEDLYILKVSMDDAKSHVQSKMPELRSWAQLFVTSQPKPDAIVQ-GRNGD 700
Query: 569 K-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE--------SKRNEINGMILPLEFK 619
K + +S++ D+EE W+P YGLKG IDA+++V + SK + + +P E K
Sbjct: 701 KVTMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDPPARGSGSKASTTKTLTVPFEVK 760
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N H+AQ LY LL+S+RY I G+LYY+++ QT + R ++ +IM
Sbjct: 761 TGKNVNSN----HQAQTALYNLLLSDRYDIEIVYGILYYMETSQTLRIPAVRHEIRHMIM 816
Query: 680 RRNEFANDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDS 719
+RN+ A I + S T LPPM R Y G+ E S + FD
Sbjct: 817 QRNQLACYIRERSVT--LPPMKKNKNACGRCYAQTTCFIYHKLADDGDGETSAMNEKFDE 874
Query: 720 HIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD---AS 776
+ HL H F W+ L+ E KE Q ++ E+W + C ++++++ A
Sbjct: 875 AVQHLNPIHKEFFLKWEELLTKEEKESQKLRRELWTMISTEREKVGRCFANVIIEEGSAY 934
Query: 777 NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
HQ+ + NRF Y F+++ P P + +D L G+ +++S E
Sbjct: 935 ENHQQMGKTNRFAYTFIKEK-PPPGFSF---------------LDSQLTVGEPIVISDEQ 978
Query: 837 DRLAVASGLITEISRFHVSVS----------------------FSKPLRLPGRNSSSDAD 874
A+A G +T + + ++V+ F+ +++PG ++ D
Sbjct: 979 GHFALALGYVTSVRKTRIAVAVDRRLHNARVRQPGFNEADNQVFASIMQVPGSGDNTPED 1038
Query: 875 SLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQ 932
+ V +R+DKDE + +R NLVQ+ S Q+RR++V L+APRF
Sbjct: 1039 AEAGPVRYRLDKDEFSNGMATVRNNLVQVMADGVLGSRQIRRLVVGLDAPRFRDAPTQYM 1098
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
P+ + S + LN DQ+ A+ KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ + ++L
Sbjct: 1099 LPSTA---SGQGLNVDQKAAVQKVMSAQDYALVLGMPGTGKTTTIAHIIRALVAQKKTVL 1155
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQV 1051
LTSYT++AVDN+L+KLK I +R+G VH E+ L+ + S EI + +
Sbjct: 1156 LTSYTHTAVDNILLKLKDDGIPILRLGPPVKVHPEVPSFATLAGVPKTSFSEIHEAWNDT 1215
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
+VA TCLGI +P+ ++ FD CI+DEA Q TLP+ LGP+ A KFVLVGDH QLPPLVQ
Sbjct: 1216 PIVATTCLGINHPVFAERIFDYCIVDEASQITLPICLGPIRMARKFVLVGDHNQLPPLVQ 1275
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
+ EAR G+++SLF+ LS++HPQ++ L+ QYRMC+ IM LSN LIY RL CG++ +
Sbjct: 1276 NEEARLGGLDVSLFKLLSKKHPQSVVNLEHQYRMCEDIMTLSNTLIYNGRLKCGTEALRT 1335
Query: 1172 AKIKVSD----------------------------LSSC---SP---WLKEALNPCRPVI 1197
+++ + LS C SP WL++ L+P V
Sbjct: 1336 TSLEIPNMDALETKHFDAESFLAHSQQTTLKEGDRLSFCPSPSPTTCWLRDLLDPSARVR 1395
Query: 1198 FVNTDMLPAYEAKDH----QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
F+NTD L + ++ Q + NP+E+ ++ ++ L+ + +IG++T Y SQ L
Sbjct: 1396 FINTDSLLPHSREEKSTRGQRIINPLESRIVCQLVDSLLTVGVPASEIGVMTHYRSQLAL 1455
Query: 1254 IRHSL-----------------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-S 1295
++H+L +E+HT D++QGRDK +++S VRS+E C+
Sbjct: 1456 LKHNLKNTLGGSAGAIRAGVKVGAEEIEMHTADRFQGRDKSVVVLSLVRSNEG---CSIG 1512
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
LL DW RINVA TRAK KL++VGS TL
Sbjct: 1513 ELLKDWRRINVAFTRAKTKLLVVGSRETL 1541
>gi|240276370|gb|EER39882.1| DNA replication ATP-dependent helicase dna2 [Ajellomyces capsulatus
H143]
gi|325089772|gb|EGC43082.1| DNA replication helicase Dna2 [Ajellomyces capsulatus H88]
Length = 1609
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 370/1011 (36%), Positives = 565/1011 (55%), Gaps = 108/1011 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
+VL + E++ RA+ L E W+ T A G +++IG FD G+C V N +I+HPD
Sbjct: 502 QVLFVQEEKTNNNRAISLRESWYDTPCAKGSYIHLIGSFDLMGQCVVDNSENLIILHPDH 561
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+CPRR+VL +R+K SE + + G +LH+IFQA + +L E
Sbjct: 562 LISATVVADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDLNWLREV 621
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L++ +ESLY V ++ + L+ +P + W F S V+ +
Sbjct: 622 ISSTLERYVESLYEIQVEFSEATEYLMSKMPALQAWAETFMRSHPTRESIVEDRNGTSSC 681
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ +IEE W+P YGLKG IDA+++V ++ + E + +P E KTG+ S+
Sbjct: 682 LSINKLLEIEEHIWSPMYGLKGNIDATVQVVVQ-EGTERKTLTVPFELKTGR---NHSNE 737
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + GLLYYL+S +T V R++++ +I +RN A I K
Sbjct: 738 AHRAQTALYTLLLSDRYDIDVTWGLLYYLESTKTFRVRAIRNEILQMIQQRNRLAEFIYK 797
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
S +LPPML+ Y G+ E SG+G+ F + HLT +H +
Sbjct: 798 NS---ELPPMLKQSRICNQCYAKNACFIYHKVMDDGDGESSGMGSTFLEVVGHLTPSHQN 854
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDNRF 788
F + WD L+ +E +++ + E+W + C +++++ + ++++ + NRF
Sbjct: 855 FFKKWDALLTMEERDIIKFRRELWTMLSNEREGVGRCFGNVMVEPGSAYEETGVPKINRF 914
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F + PS N + GDS L G+ +++S E A+A+G IT
Sbjct: 915 RYTFYKYKPPS---NFTFGDS-------------QLSVGEPIVVSDEKGHFALANGYITH 958
Query: 849 ISRFHVSVSFSKPL-----RLPGRN---------------SSSDADSLLHE------VWR 882
ISR +SV+ + L R P + + ++L E ++R
Sbjct: 959 ISRKRISVAVDRRLHNARMRCPNFDAERHQAFTGIMEIIETGGSESTILPERVEDTNLYR 1018
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQS-AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE + +R N+V + ++ Q+ +LR +I+D AP F+S S S P L+
Sbjct: 1019 LDKDEFSNGMATVRNNIVCMMDRNMPQTRRLRDLIIDGHAPSFNSISS-STIPWLA---- 1073
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ H ++AL +G S+LLTSYT++AV
Sbjct: 1074 GTELNIDQKEAIEKVMSANDYALVLGMPGTGKTTTIAHIIRALASQGKSVLLTSYTHTAV 1133
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K+K +I +R+G +H +++K L+A + EE+K + ++VA TCLG
Sbjct: 1134 DNILLKIKDDNIRTLRLGATTKIHPDVRKFADLAATPKETTEELKDIYENSRIVATTCLG 1193
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
I +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ +A+E G+
Sbjct: 1194 INHPIFNSRMFDFCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKQAQEGGL 1253
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ L + HP ++ L+ QYRMC+ IM LSN LIY L CG+ E+A + +K+ +L
Sbjct: 1254 DVSLFKLLCDLHPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPEVAKSYLKIPNLH 1313
Query: 1180 ---------SSCSP--------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQT 1214
SS SP W+++ L+ VNTD L A E+
Sbjct: 1314 GLKQHHVDPSSLSPNLRNSCLGSRYGRCWIRDLLDSVARTRLVNTDPLQPQAIESSKGSR 1373
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQG 1273
+ N +EA L A++ + + I +DIGIIT Y SQ +L++ +L VE+HT D++QG
Sbjct: 1374 IINHIEAVLCAQLVESFLSVGISAQDIGIITLYRSQLSLLKQNLRHHPDVEMHTADRFQG 1433
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
RDK+ I++S VRS N L DW R+NVA TRA+ KL++VGS TL
Sbjct: 1434 RDKEIIIMSCVRS--NSERNVGELFRDWRRVNVAFTRARTKLLIVGSKNTL 1482
>gi|225682750|gb|EEH21034.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1492
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 363/1015 (35%), Positives = 561/1015 (55%), Gaps = 115/1015 (11%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
+VL + E++ RA+ L E WF T G +++IG FD G+C V +N +I+HPD
Sbjct: 377 QVLFVEEEKTKINRAITLRESWFDTPCTKGSYIHLIGSFDPTGQCVVNNSDNIIILHPDH 436
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE + + G +LH+IFQA + + +L E
Sbjct: 437 LLSATVVADSFTCQRRAVLQDRVKATSEANKPQVYGHILHEIFQAAMTANRWDLPWLREI 496
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L++ +ESLY V+ + + L+ +P + +W LF S+ ++ + +
Sbjct: 497 ISRTLERYVESLYEIQVDFPEAIEYLMSKMPSLRSWADLFVRSRPTTESIMEDRNGTSSR 556
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+ I+++ ++EE W+P YGLKG IDA+++V ++ + E + +PLE KTG+ ++
Sbjct: 557 ISINKLLEVEEHIWSPMYGLKGNIDATVQVVVQ-EGTEQKTLTVPLEVKTGR---NNTNE 612
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+LYYL+ +T V R+++ +I +RN + + +
Sbjct: 613 AHRAQTALYTLLLSDRYDIDVTFGILYYLEVTKTSRVRAIRTEIRQMIQQRNRLSEFVCQ 672
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
T +LPPML+ Y G+ E S LGN F + HLT +H
Sbjct: 673 ---TSKLPPMLKKPRICNQCYAKNACFTYHKIMDNGDGETSELGNSFLEVVGHLTPSHQV 729
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRF 788
F + WD L+ +E +++ + E+W S C +I+++ ++ E + + NRF
Sbjct: 730 FFKKWDALLTMEERDIMKFRRELWTMLSSEREAVGRCFGNIMVEPGSAYEETDAPKINRF 789
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F + P+ N S GDS L GD +++S E A+A G +T
Sbjct: 790 RYTFFKHQPPA---NFSFGDS-------------QLSVGDPIVVSDEKGHFALAGGYVTH 833
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------------VW 881
ISR +SV+ + L R S+ D+ H+ ++
Sbjct: 834 ISRKRISVTLDRRLH-NARTRRSNFDADRHQAFIGIMEIVETGGRESTISPEKAEDKNMY 892
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFD--SGSVFSQDPALSY 938
R+DKDE + + +R NLV + + Q+ +LR +I+D AP F S S S
Sbjct: 893 RLDKDEFSSGMATVRNNLVCMMDNTMLQAKRLRDVIIDGRAPSFKPTSSSTISS------ 946
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ LN DQ++AI KV++A DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT+
Sbjct: 947 -LANAELNVDQKQAINKVMSANDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTH 1005
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K+K +I +R+G +H ++QK L+A ++EE++ + VVA T
Sbjct: 1006 TAVDNILLKIKDDNIRTLRLGATTKIHPDVQKFADLAATPKKTIEELRDIYENSLVVATT 1065
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ ++ FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ EA+E
Sbjct: 1066 CLGINHPIFNNRTFDYCIVDEASQITLPVCLGPIRMAKAFILVGDHYQLPPLVQDKEAQE 1125
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ L + P ++ L+ QYRMC+ IM LSN LIY L CG+ +A++ +K+
Sbjct: 1126 GGLDVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPAVASSYLKIL 1185
Query: 1178 DLSSC---------------SP---------WLKEALNPCRPVIFVNTDML--PAYEAKD 1211
+LS SP W+++ L+P VNTD L A E+
Sbjct: 1186 NLSGLKQHHVNSSSLPSNIRSPCLGSRYGHCWIRDLLDPVAKTRLVNTDFLVPQAKESSK 1245
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTID 1269
+ N +EA L A++ + I +DIG+IT Y SQ L++ +L + +E+HT D
Sbjct: 1246 GSRIINSIEATLCAQLVNSFISVGISARDIGVITLYRSQLALLKQNLRHYLPDLEMHTAD 1305
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK+ I++S VRS N L DW R+NVA TRAK KL+++GS TL
Sbjct: 1306 RFQGRDKEIIIMSCVRS--NSERNVGELFRDWRRVNVAFTRAKTKLLIIGSKDTL 1358
>gi|212542437|ref|XP_002151373.1| DNA replication helicase Dna2, putative [Talaromyces marneffei ATCC
18224]
gi|210066280|gb|EEA20373.1| DNA replication helicase Dna2, putative [Talaromyces marneffei ATCC
18224]
Length = 1670
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 363/1032 (35%), Positives = 575/1032 (55%), Gaps = 112/1032 (10%)
Query: 370 FLVLEVSEKNRPADPVDA-KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG 428
+L+++++E D + K P +VL + +E++ + + L E WF + +++IG
Sbjct: 527 YLIVQIAEST--YDTLKGFKQPEQVLSVTDEKTHTRKVIILRESWFDSPCTKNSYIHLIG 584
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGT 487
++D +G+C V +N +I+HPD L+S T VA + +C RR+VL +R+K S+ + + G
Sbjct: 585 DYDHRGQCIVDNAHNMIILHPDHLISATVVADAITCQRRAVLQDRIKATSDINKPQVYGH 644
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI 547
+LH++FQ + ++ + +L + +ESLYA V+ + + ++ +P++ W
Sbjct: 645 ILHEVFQEAMKVNQWDLQSMRTLVERILVQYVESLYAIHVSMIEAVEYVMSKVPELKAWA 704
Query: 548 ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
+F + V+ + L I+++ ++EE W+P YGLKG +DA+++V + +
Sbjct: 705 DVFLLPKPNAECMVEDRNGSKANLSINKLLEVEEHVWSPMYGLKGNVDATVQV-VYNDGG 763
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
+ + +PLE KTGK +S HRAQ LYTLL+S+RY + GLLYYL+ + +
Sbjct: 764 DQKTLTIPLEMKTGK---KDTSHSHRAQTSLYTLLLSDRYDIEVTFGLLYYLEMKKMFRI 820
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR-------AYG-------------GN 707
R +L+ +I RN A I + +LPPM++ Y GN
Sbjct: 821 RGIRHELLQMIQERNRLAGFIREK---MELPPMIQRKHLCNQCYSKTACFVYHKLVDDGN 877
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG FD + HL + H F + WD+L+ LE K+M + E+W + C
Sbjct: 878 GETSGLGPKFDEVVGHLDSRHAEFFKKWDKLLTLEEKDMMKFRRELWTMTSTEREPLGRC 937
Query: 768 LSSIVLDASNEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S +V++ + ++ + NRF Y FV+ AS G S + I TL
Sbjct: 938 FSGVVIEPGSAYEDPSGSKINRFRYTFVKS-------KASPGFSFTESQI-------TL- 982
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSSSDADSLL----- 877
G+ +++S E A+A+G + +S +SV+ + L R+ + +D +
Sbjct: 983 -GEPIVISDEKGHFALANGYVGRVSPKRISVAVDRRLHDARVRSKEFDADRNQSFKGIME 1041
Query: 878 ------------HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF- 924
V+R+DKDE + +R NLV L + S LR++I++ + P F
Sbjct: 1042 VGQSSNSEYPEEQMVYRLDKDEFSNGMATIRNNLVSLMEDFSMSIPLRKLIIEGKTPEFK 1101
Query: 925 ----DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
+ ++FS S+ +LN DQ++AI KV++AKDYALILGMPGTGKT+T+ H
Sbjct: 1102 KLPSSAEAIFSS--------SQANLNIDQKQAIDKVMSAKDYALILGMPGTGKTTTIAHI 1153
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNIN 1039
++AL+ +G S+LLTSYT++AVDN+L+K+K+ +I +R+G VH E+Q+ L+A+ N
Sbjct: 1154 IRALVSQGKSVLLTSYTHTAVDNILLKIKNDNIRTLRLGAVAKVHPEVQQFVDLAAIPKN 1213
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
++EE+++ + KVVA TCLGI +P+ ++ FD CI+DEA Q TLPV LGP+ A F+L
Sbjct: 1214 TIEELQESYQESKVVATTCLGINHPIFNERIFDYCIVDEASQITLPVCLGPVRMAKTFIL 1273
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGDHYQLPPLVQ+ A+E G+++SLF+ L + P +++ L+ QYRMC+ IM LSN LIY
Sbjct: 1274 VGDHYQLPPLVQNKAAQEGGLDVSLFKLLCDAQPSSVTNLEHQYRMCEEIMLLSNTLIYS 1333
Query: 1160 DRLSCGSDEIANAKIKVSDL-----------------------SSCSPWLKEALNPCRPV 1196
RL CG+ E+A+ +K+ L + WL + LNP
Sbjct: 1334 GRLKCGNAEVASRSVKLPKLHDSIKNHHATSLAEITSGRCPGPTRARCWLNDLLNPSAKT 1393
Query: 1197 IFVNTDMLP--AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
+ VNTD L A E L N EA L ++ Q L+ + I ++IG+IT Y SQ L+
Sbjct: 1394 LLVNTDTLSGRAPETLVGSRLTNTSEATLCVQLVQSLISSGISPREIGVITFYRSQLALL 1453
Query: 1255 RHSLSVSS--VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
R SL S +E+HT DK+QGRDK+ +++S VRS+ + + LL DW RINVA TRA+
Sbjct: 1454 RQSLRQYSNELEMHTTDKFQGRDKEIVILSCVRSNNDKQ--VGELLRDWRRINVAFTRAR 1511
Query: 1313 KKLIMVGSCRTL 1324
KL+++GS TL
Sbjct: 1512 TKLLVIGSKSTL 1523
>gi|154287262|ref|XP_001544426.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150408067|gb|EDN03608.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1332
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 366/1012 (36%), Positives = 563/1012 (55%), Gaps = 110/1012 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
+VL + E++ RA+ L E W+ T A G +++IG FD G+C + N +I+HPD
Sbjct: 225 QVLFVQEEKTNNNRAISLRESWYDTPCAKGSYIHLIGSFDLMGQCVLDNSENLIILHPDH 284
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T +A SF+CPRR+VL +R+K SE + + G +LH+IFQA + +L E
Sbjct: 285 LISATVLADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDLNWLREV 344
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L+ +ESLY V ++ + L+ +P + W F S V+ +
Sbjct: 345 ISSTLEHYVESLYEIQVEFSEATEYLMSKMPALQAWAETFMRSHPTRESIVEDRNGTSSC 404
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ +IEE W+P YGLKG IDA+++V ++ + E + +P E KTG+ S+
Sbjct: 405 LSINKLLEIEEHIWSPMYGLKGNIDATVQVVVQ-EGTERKTLTVPFELKTGR---NHSNE 460
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + GLLYYL+S +T V R+++ +I +RN A I K
Sbjct: 461 AHRAQTALYTLLLSDRYDIDVTFGLLYYLESTKTFRVRAIRNEIRQMIQQRNRLAEFIYK 520
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
S +LPPML+ Y G+ + SG+G+ F + HLT +H +
Sbjct: 521 NS---KLPPMLKQSRICNQCYAKNSCFIYHKVMDDGDGKSSGMGSSFLEVVGHLTPSHQN 577
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDNRF 788
F + WD L+ +E +++ + E+W + C +I+++ ++++ + NRF
Sbjct: 578 FFKKWDALLTMEERDIIKFRRELWTMLSNEREGVGRCFGNIMVEPGTAYEETSVPKINRF 637
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F + PS N + GDS L G+ +++S E A+A+G +T
Sbjct: 638 RYTFYKHKPPS---NFTFGDS-------------QLSVGEPIVVSDEKGHFALANGYVTH 681
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------------VW 881
ISR +SV+ + L R S+ D+ H+ ++
Sbjct: 682 ISRKRISVAVDRRLH-NARMRCSNFDAERHQAFTGIMEIIETGGSESTILPERVEDTNLY 740
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+DKDE + +R NLV + ++ Q+ +LR +I+D AP F+S S S P L+
Sbjct: 741 RLDKDEFSNGMATVRNNLVCMMDRNMPQTRRLRDLIIDGHAPSFNSISS-STIPWLA--- 796
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ H ++AL +G S+LLTSYT++A
Sbjct: 797 -GTELNIDQKGAIEKVMSANDYALVLGMPGTGKTTTIAHLIRALASQGKSVLLTSYTHTA 855
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+K+K +I +R+G +H +I+K L+A ++EE+K + ++VA TCL
Sbjct: 856 VDNILLKIKDDNIRTLRLGATTKIHPDIRKFADLAATPKETIEELKDMYENSRIVATTCL 915
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
GI +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ +A+E G
Sbjct: 916 GINHPIFNSRMFDFCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKQAQEGG 975
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+++SLF+ L + HP ++ L+ QYRMC+ I+ LSN LIY L CG+ E+A + +K+ +L
Sbjct: 976 LDVSLFKLLCDLHPASVVNLEHQYRMCEDILLLSNTLIYSGHLKCGTPEVAKSYLKIPNL 1035
Query: 1180 ----------SSCSP--------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQ 1213
SS SP W+++ L+P VNTD L A E+
Sbjct: 1036 HGLKQHHVDASSLSPNLRNSCLGSRYGRCWIRDLLDPVARTRLVNTDPLQPQAVESSKGS 1095
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-SVEIHTIDKYQ 1272
+ N +EA L ++ + + I +DIGI+T Y SQ +L++ +L +VE+HT D++Q
Sbjct: 1096 RIINHIEAVLCTQLVESFLSVGISAQDIGIVTLYRSQLSLLKQNLRHHPNVEMHTADRFQ 1155
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
GRDK+ I++S VRS N L DW R+NVA TRA+ KL+++GS TL
Sbjct: 1156 GRDKEIIIMSCVRS--NSERNVGELFRDWRRVNVAFTRARTKLLIIGSKNTL 1205
>gi|115389560|ref|XP_001212285.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194681|gb|EAU36381.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1518
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 368/1042 (35%), Positives = 575/1042 (55%), Gaps = 110/1042 (10%)
Query: 362 VNGTSSC-HFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAP 420
+NG + +L+L+++E + + P +VL + +E+S ++ V L E WF T +
Sbjct: 463 INGRQAIKRYLILDIAESTYTTEKGRVQ-PEQVLLVQDERSKLKKVVILRESWFDTPCSK 521
Query: 421 GDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERS 480
+++IG+FD G+C V +N +I+HPD LVS T VA S C RR+VL +R+K +
Sbjct: 522 DLYIHLIGDFDTAGQCVVNDSHNMIILHPDHLVSATVVADSIGCQRRAVLQDRIKKNSGD 581
Query: 481 ISA--LLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVE 538
+ + G + H+IFQ L M L V K+IE +Y ++ + ++
Sbjct: 582 LGKPQVFGNIFHEIFQEALKLNQWDMTTLRTMTESVAVKHIEEIYLIHMSIPEAVDYVMS 641
Query: 539 AIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASI 598
IP + +W LF S+ N V+ + +L I+++ ++EE W+P YGLKG IDA++
Sbjct: 642 KIPALKSWAELFLRSKPSNESLVEDRNSSKMRLSINKLLEVEEHIWSPMYGLKGNIDATV 701
Query: 599 RVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYY 658
+V +E N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYY
Sbjct: 702 QVACHDGESEKN-LVVPLELKTG---NRDTNHAHRAQTALYTLLLSDRYDVDVTFGLLYY 757
Query: 659 LQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR---------------- 702
+++ + + R +L+ +I RN A + + + LPPML+
Sbjct: 758 VETSKIFRIRGIRHELLQMIHARNRLAGYMRERT---HLPPMLKRSSMCNKCYSKTPCFI 814
Query: 703 ----AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG 758
A G+ E SGLG+ F + + HL H F + WD L+ E + M K E+W
Sbjct: 815 YHKLADDGDGETSGLGDDFVNAMDHLNVQHRDFFQKWDNLLTKEEQSMMRFKRELWTLLS 874
Query: 759 SGGNHFTGCLSSIVLDASN--EHQKSYRDNRFVYHFVR-QHMPSPNLNASDGDSLIGAAI 815
S C ++V++ + E + + NR+ Y FV+ Q PS + S
Sbjct: 875 SEREALGRCFGNVVIEPGSGYEDKDGIKINRYRYTFVKKQATPSFSFTESQ--------- 925
Query: 816 PTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSS 870
L G+ +++S E A+A+G + ++S ++V+ + L + G N+
Sbjct: 926 --------LTVGEPIVISDEEGHFALANGYVVQVSPRRITVAVDRRLHNARTKAEGFNAR 977
Query: 871 SD---------ADSLL----------HEVWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSS 910
++ +D + V+R+DKDE + +R NLV + + Q+
Sbjct: 978 NNQTFRGIMEISDDITSSNLPLEPEEQTVYRLDKDEFSNGMATVRNNLVSMMERDLFQAK 1037
Query: 911 QLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPG 970
LRR+I++ EAPRF S + PA+ +LN DQ RAI KV++A+DYAL+LGMPG
Sbjct: 1038 NLRRLIIEGEAPRFKPAS---KSPAIPG-SDGANLNVDQTRAIDKVMSARDYALVLGMPG 1093
Query: 971 TGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK 1030
TGKT+T+ H ++AL+ +G S+LLTSYT++AVDN+L+K++ +I +RIG VH EIQ+
Sbjct: 1094 TGKTTTISHIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDNIRILRIGAATKVHPEIQQ 1153
Query: 1031 HC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
L+A ++EE+K + +VVA TCLG+ + + + + FD CI+DEA Q TLPV LG
Sbjct: 1154 FADLAATPKQTMEELKTVYEDSQVVATTCLGVNHNIFSQRIFDYCIVDEASQITLPVCLG 1213
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
P+ A F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP+++ L+ QYRMC+ I
Sbjct: 1214 PIRMAQTFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPESVVNLEHQYRMCEEI 1273
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-----------------------WL 1186
M LSN LIY +L CG+ E+A +K+ +L WL
Sbjct: 1274 MLLSNNLIYSGKLKCGTLEVAERSLKLPNLPGLKQHHADKFEEIPGQRELCLGPGHRCWL 1333
Query: 1187 KEALNPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
++ L+P VNTD L PA + + + NP EA L +++ + + + + IG+I
Sbjct: 1334 QDLLDPSAKTRLVNTDTLGTPAVDVANGSRIVNPTEATLCSQLVEAFISCGVPARSIGVI 1393
Query: 1245 TPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
T Y SQ +L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW
Sbjct: 1394 TFYRSQLSLLKQNLRHHLPELEMHTADKFQGRDKEVVILSCVRS--NSDNNVGDLLRDWR 1451
Query: 1303 RINVALTRAKKKLIMVGSCRTL 1324
R+NVA TRA+ KL++VGS RTL
Sbjct: 1452 RVNVAFTRARTKLLVVGSKRTL 1473
>gi|315042666|ref|XP_003170709.1| DNA replication ATP-dependent helicase dna2 [Arthroderma gypseum CBS
118893]
gi|311344498|gb|EFR03701.1| DNA replication ATP-dependent helicase dna2 [Arthroderma gypseum CBS
118893]
Length = 1595
Score = 604 bits (1557), Expect = e-169, Method: Compositional matrix adjust.
Identities = 358/1013 (35%), Positives = 569/1013 (56%), Gaps = 108/1013 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVG-RENNFLIVHPD 450
KVL + ++ + RA+ L + WF + ++ +++IG FD G+C V ++ +I+HPD
Sbjct: 494 KVLVVREDKKKKTRAITLRDSWFESAVSKDSYIHLIGTFDRNGQCLVDDSSSHAIILHPD 553
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K S+ + + G +LH+IFQ + + +L
Sbjct: 554 HLISATVVADSFTCPRRAVLQDRVKATSDANKPQVYGHILHEIFQEAMKANTWDLPWLNN 613
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+ VL K IESL+ + ND L +P + +W L+ + +D +
Sbjct: 614 LIKTVLPKYIESLFEVNLTINDATSYLEAKMPALRDWAKLYVHPRPTAGSMMDDRNGATS 673
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E N+ + +PLE KTGK ++
Sbjct: 674 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEDGNQ-KTLTVPLEVKTGK---NNTN 729
Query: 630 MEHRAQVILYTLLMSERYLK-HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 730 HSHRAQTALYSLLLSDRYADINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYL 789
Query: 689 IKASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
+ +LPPML+ Y G +E SG+G +F + H+T H
Sbjct: 790 RQH---LELPPMLKNSRLCSPCYAKTTCFLYHKLVDDGTEETSGVGKLFQENSSHITAPH 846
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
+F + WD L+ LE KEM + E+W + C ++V++ +++E+ + R N
Sbjct: 847 QTFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVVIENGSASENSEGPRIN 906
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y FV+ P P S +S I G+ +++S E A+A+G +
Sbjct: 907 RFQYTFVK---PKPASGFSFTESQINI-------------GEPIVVSDEQGHFALANGYV 950
Query: 847 TEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE------------------------VWR 882
+IS ++V+ + L RN D++ ++ ++R
Sbjct: 951 VQISPRRITVAVDRRLH-NARNKEPGFDAVNYQAFQGIMDISSKNKNAMDINRENPMLYR 1009
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE +++R NLV L + +S++LR +IV+ AP F SGS S+ P
Sbjct: 1010 LDKDEFSNGLAIVRNNLVSLMARDVFRSARLRELIVEGAAPVFKSGSPLSRLPKTV---- 1065
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++AV
Sbjct: 1066 GPNLNTDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAV 1125
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K++ +R+G VH E+Q+ ++ N++EE++ + K+VA TCLG
Sbjct: 1126 DNILLKIRDDKFRILRLGTPSKVHPEVQQFAEMATTPKNTIEELEDSYENSKIVATTCLG 1185
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
+ + + + FD CI+DEA Q TLPV LGP+ A KF+LVGDHYQLPPLVQS +A E G+
Sbjct: 1186 VNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKKFILVGDHYQLPPLVQSKQAVEGGL 1245
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY +RL CG+ IA + + ++
Sbjct: 1246 DLSLFKLLCDMHPSSVVNLEHQYRMCEDVMLLSNTLIYSNRLKCGTPAIATRSLSIPNID 1305
Query: 1180 -------------SSCSP---------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTL 1215
S+ SP WL++ ++P FVNTD L A ++ +
Sbjct: 1306 GLKRIHSTSFPPSSTQSPCLGSSHSRCWLRDLIDPRAKARFVNTDPLRPEALDSAKGSRI 1365
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQG 1273
N VEA L A++ + + I +DIG++T Y SQ +L++ L + +E+HT D++QG
Sbjct: 1366 INEVEATLCAQLVEAFISVGIAAQDIGVVTLYRSQLSLLKQKLRHHGADLEMHTADRFQG 1425
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
RDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1426 RDKEVIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1476
>gi|121708259|ref|XP_001272076.1| DNA replication helicase Dna2, putative [Aspergillus clavatus NRRL 1]
gi|119400224|gb|EAW10650.1| DNA replication helicase Dna2, putative [Aspergillus clavatus NRRL 1]
Length = 1679
Score = 602 bits (1553), Expect = e-169, Method: Compositional matrix adjust.
Identities = 359/1038 (34%), Positives = 580/1038 (55%), Gaps = 118/1038 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+++V+E + P KVL + +E++ +++ + L E WF + + +++IG+
Sbjct: 546 YLIVDVAETTYSTQKGRIQ-PEKVLLVQDEKAKQKKVILLRESWFDSPCSKDAYIHLIGD 604
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTL 488
FD G+C V +N +++HPD LVS T VA S SC RR+VL +R+K S+ S + G +
Sbjct: 605 FDPTGQCVVDDSHNMIVLHPDHLVSATVVADSISCQRRAVLQDRIKNSSDISKPQVFGNI 664
Query: 489 LHQIFQAGLM---KEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLN 545
H++FQ + ++P++K L E +L K++E LY ++ + ++ IP +
Sbjct: 665 FHELFQEAMKLNKWDLPSLKALVE---AILIKHVEDLYLIDMSVPAAVEYMMSRIPALRA 721
Query: 546 WIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK 605
W +F V+ +L I+++ ++EE W+P YGLKG IDA+++V
Sbjct: 722 WAEIFLRKTPSAQSLVEDRHSSKVRLSINKLLEVEEHIWSPMYGLKGNIDATVQVACHDG 781
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYYL+ +
Sbjct: 782 EGSRN-LVIPLELKTG---NRDTNQAHRAQTALYTLLLSDRYDVEVTFGLLYYLEISKIF 837
Query: 666 GVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG-------------------- 705
+ R +L+ +I RN A + LPPM++ G
Sbjct: 838 RIRGVRHELLQMIQERNRLAGYV---RERHLLPPMVKKPGMCSRCYSKTPCFIYHKLVDD 894
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFT 765
G+ E SGLG+ F + HL H SF R WD L+ E + M + E+W S
Sbjct: 895 GDGETSGLGDEFVKAMDHLHPQHQSFFRKWDDLLTKEEQSMMRFRRELWTLLSSEREALG 954
Query: 766 GCLSSIVLDASNEHQK--SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT 823
C ++V+ + H+ S + NR+ Y F+++ SP+ + ++
Sbjct: 955 RCFGNVVIQPGSAHEDKDSIKINRYRYTFMKKQ-SSPSFSFTESQ--------------- 998
Query: 824 LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR-------------------- 863
L G+ +++S E A+A+G + ++S H+ V+ + L
Sbjct: 999 LTVGEPIVISDEKGHFALANGYVVQVSPKHIMVAVDRRLHNARTKMKDFDAAKNQSFRGI 1058
Query: 864 -------LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRM 915
P R+S+ + + + ++R+DKDE +++R NL+ + + Q+S+LRR+
Sbjct: 1059 MEIVEGGAPPRSSADEQEEEI--LYRLDKDEFSNGMAIVRNNLISMMEKDVFQASRLRRL 1116
Query: 916 IVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
IV+ EAP F+S + S L ++SLN DQ+RAI KV++A+DYAL+LGMPGTGKT+
Sbjct: 1117 IVEGEAPVFNSKASDS----LMSDSDKESLNVDQKRAIEKVMSARDYALVLGMPGTGKTT 1172
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LS 1034
T+ H ++AL+ +G S+LLTSYT++AVDN+L+K+++ +I +R+G VH E+Q+ L+
Sbjct: 1173 TIAHIIRALVAQGKSVLLTSYTHTAVDNILLKIRNDNIRILRVGATAKVHPEVQQFVDLA 1232
Query: 1035 AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
A+ ++EE+K ++ +VVA TCLG+ + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1233 AIPKTTIEELKASYEESQVVATTCLGVNHNIFNRRIFDYCIVDEASQITLPVCLGPIRMA 1292
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
F+LVGDHYQLPPLVQ+ EA++ G+++SLF+ LS+ HP+++ L+ QYRM + IM LSN
Sbjct: 1293 RTFILVGDHYQLPPLVQNKEAQDGGLDVSLFKLLSDAHPESVVNLEHQYRMSEDIMLLSN 1352
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSC----------SP--------------WLKEAL 1190
LIY RL CG+ E+A+ +K+ +++ SP WL++ L
Sbjct: 1353 TLIYSGRLKCGTHEVASRSLKIPNMAGLKLYHINQLPQSPHQRQFCLGTSQGRCWLRDLL 1412
Query: 1191 NPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+P F+NTD L PA + + + N E+ L + + + L+ I + IG+IT Y
Sbjct: 1413 DPSAKNRFINTDTLEIPARDMANGARIVNSAESTLCSHLVEALISCGIPARKIGVITFYR 1472
Query: 1249 SQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
SQ +L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW RINV
Sbjct: 1473 SQLSLLKQTLRRYLPELEMHTADKFQGRDKEIVILSCVRS--NADNNVGDLLRDWRRINV 1530
Query: 1307 ALTRAKKKLIMVGSCRTL 1324
A TRA+ KL+++GS TL
Sbjct: 1531 AFTRARTKLLVIGSKSTL 1548
>gi|342881437|gb|EGU82331.1| hypothetical protein FOXB_07160 [Fusarium oxysporum Fo5176]
Length = 1525
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 363/1016 (35%), Positives = 555/1016 (54%), Gaps = 114/1016 (11%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L + + S + + VHL WF T V++IG F +G+C + N LI+HP
Sbjct: 445 PEKILLIQADNSKDIKTVHLRASWFDTPAHAEAYVHIIGGFSSRGQCIIDDGQNLLILHP 504
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SF C RR+VL +R+K + L+ GT+LH+IFQ L+ + FL
Sbjct: 505 DQLISATVVADSFGCMRRAVLQDRVKATSPPTPPLIYGTMLHEIFQEALLANKWDLPFLC 564
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
+ +K++E LY V + L + ++ W F S+ V+ +
Sbjct: 565 AVIDRITEKHVEDLYTIKVGIPSAREHLQSKMTELSYWAGAFVSSRPKEDAVVEDRNGKK 624
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ ++++ D+EE W+P YGLKG IDA++ V ++ N+I + +P E KTGK N
Sbjct: 625 ANMAVTKLLDVEEHVWSPMYGLKGNIDATVEVAMQDG-NDIRTLTVPFEVKTGKHANSN- 682
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
H AQ LYTLL+S+RY I G+LYY+++ +T + R +L +IM+RN+ A +
Sbjct: 683 ---HMAQTALYTLLLSDRYDIEIAYGILYYMETSKTMRIPAIRHELRHMIMQRNQLACYV 739
Query: 689 IKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAH 728
+ S QLPPML+ A G+ + SG+ FD + HLT H
Sbjct: 740 RERSV--QLPPMLKSKHMCGKCYAKTSCFIYHRLADDGDGDSSGMNEKFDELVKHLTPHH 797
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
F W+ L+ E KE Q K E+W + + C + ++++ +++ + R N
Sbjct: 798 QQFFIKWENLLTKEEKESQKTKRELWTMTSAEREKKSRCFADVIIEEGSASVDTDNPRIN 857
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
R+ Y FV++ S G S ++ L G+ +++S E A+A G +
Sbjct: 858 RYHYTFVKRVQVS-------GFSF---------LESELSVGEPIVVSDEDGHFALAIGYV 901
Query: 847 TEISRFHVSVSFSKPL-----RLPGRN------------------SSSDADSLLHEV--- 880
T + R +SV+ + L R PG + + +A + E
Sbjct: 902 TAVKRQRISVAVDRRLHNARIRQPGFDERDNQIFASIMDVAHEGATQDEATGKIKEAPIR 961
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQS-AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+D+DE + +R NLVQ+ + Q+RR+IVDLEAPRF + YI
Sbjct: 962 YRLDQDEFSNGMATVRNNLVQMMADDIVGARQIRRLIVDLEAPRFKAAPT-------QYI 1014
Query: 940 WSEK-SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
S++ SLN DQ RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL +G S+LLTS+T+
Sbjct: 1015 VSDRDSLNVDQHRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALTYQGKSVLLTSHTH 1074
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+KLK+ I +R+G VH ++Q L+ + S +EIK +VA T
Sbjct: 1075 TAVDNILLKLKADKIPILRLGAPAKVHPDVQDFAILAGHPMKSFDEIKNAWHGTPIVATT 1134
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ ++ FD CI+DEA Q TLP+ GP+ A FVLVGDH QLPP+V++ EARE
Sbjct: 1135 CLGINHPVFHERSFDYCIVDEASQITLPICAGPIRMARTFVLVGDHNQLPPVVKNEEARE 1194
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV- 1176
G+++SLF+ LS+ HPQ++ L+ QYRMC+ IM LSN LIY RL CG++++ K++V
Sbjct: 1195 GGLDVSLFKLLSDTHPQSVVNLEHQYRMCEDIMTLSNTLIYDGRLRCGTEQLRRRKLEVP 1254
Query: 1177 ------------SDLSSCSP------------WLKEALNPCRPVIFVNTDML--PAYEAK 1210
S +++ +P WL + L+ V FVNTD + P E
Sbjct: 1255 RMEALMQRHYDASTINAATPRSFCAAPGPNRCWLYDLLDSEARVRFVNTDTIEPPVREEA 1314
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTID 1269
+ + N E +++++ L+ + +IG++T Y +Q +++ L + S VE+HT D
Sbjct: 1315 QGKRIVNSAEVRIVSQLVDSLLTVGVPDSEIGVMTHYRAQLFMLKDKLKMFSGVEMHTTD 1374
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK+ I++S VRS+E C LL DW RINVA TRAK KL++VGS TL
Sbjct: 1375 RFQGRDKEVIVLSLVRSNE---ACNIGDLLKDWRRINVAFTRAKTKLLVVGSKSTL 1427
>gi|408389633|gb|EKJ69070.1| hypothetical protein FPSE_10739 [Fusarium pseudograminearum CS3096]
Length = 1488
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 364/1035 (35%), Positives = 560/1035 (54%), Gaps = 113/1035 (10%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E + D P K+L + + S + VHL WF T V+VIG+
Sbjct: 389 YLVTNVLE-DEHTDQYGNARPEKILLIQADNSKHIKTVHLRGSWFDTPAHADAYVHVIGD 447
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F +G+C V N LI+HPD L+S T VA SF C RR+VL +R+K + L+ GT+
Sbjct: 448 FTARGQCVVDDAQNLLILHPDQLISATVVADSFGCMRRAVLQDRVKATSPPTPPLIYGTM 507
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+IFQ L+ + FL + +K++E LY V + L + ++ W
Sbjct: 508 LHEIFQEALLANQWDLPFLCSVIERITEKHVEDLYTIKVGIPSAREHLQSKMTELSYWAG 567
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
F SQ + V+ + + ++++ D+EE W+P YGLKG IDA++ V ++ +N
Sbjct: 568 SFVSSQAKHDAVVEDRNGKKANMAVTKLLDVEEHVWSPMYGLKGNIDATVEVAMQDGKN- 626
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ + +P E KTGK N H AQ LYTLL+S+RY I G+LYY+++ +T +
Sbjct: 627 VRTLTVPFEVKTGKHANSN----HMAQTALYTLLLSDRYDIEIAYGILYYMETSKTMRIP 682
Query: 669 VQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGNK 708
R +L +IM+RN+ A + + S QLPPML+ A G+
Sbjct: 683 AIRHELRHMIMQRNQLACYVRERSV--QLPPMLKSKHMCGKCYAKTSCFIYHRLADDGDG 740
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E SG+ FD + HLT H F W+ L+ E KE Q K E+W + C
Sbjct: 741 ESSGMNEKFDELVKHLTPHHQQFFIKWENLLTKEEKESQKTKRELWTMTSVEREKKSRCF 800
Query: 769 SSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
+ ++++ +++ + + NR+ Y F+++ N G S ++ L
Sbjct: 801 ADVIIEEGSASVDTDNPKINRYHYTFIKR-------NPIAGFSF---------LESELTV 844
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRN------------- 868
G+ +++S E A+A G +T + R +SV+ + L R PG +
Sbjct: 845 GEPIVVSDEDGHFALAIGYVTAVKRQRISVAVDRRLHNARIRQPGFDEVDNQVFASIMDV 904
Query: 869 -----SSSDADSLLHEV---WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDL 919
+ ++ + E +R+D+DE + +R NLVQ+ + Q+RR+IVDL
Sbjct: 905 AHEGATQDESTGKIKEAPIRYRLDQDEFSNGMATVRNNLVQMMADDVFGARQIRRLIVDL 964
Query: 920 EAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
E PRF + P + +LN DQRRAI KV++A+DYAL+LGMPGTGKT+T+ H
Sbjct: 965 EGPRFKAA------PTQYTVSDRDNLNVDQRRAIEKVMSAQDYALVLGMPGTGKTTTIAH 1018
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNI 1038
++AL +G S+LLTS+T++AVDN+L+KLKS I +R+G VH ++Q+ L+ +
Sbjct: 1019 IIQALTSQGKSVLLTSHTHTAVDNILLKLKSDKIPILRLGAPAKVHPQVQEFATLAGHPM 1078
Query: 1039 NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
S EEIK+ +VA TCLGI +P+ ++ FD CI+DEA Q TLP+ GP+ A FV
Sbjct: 1079 KSFEEIKEAWHGTPIVATTCLGINHPVFHERTFDYCIVDEASQITLPICAGPIRMARTFV 1138
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGDH QLPP+V++ EARE G+++SLF+ LS+ HP+++ L+ QYRMC+ IM LSN LIY
Sbjct: 1139 LVGDHNQLPPVVRNEEAREGGLDVSLFKLLSDTHPESVVNLEHQYRMCEDIMALSNTLIY 1198
Query: 1159 GDRLSCGSDEIANAKIKV-------------SDLSSCSP------------WLKEALNPC 1193
+L CG++++ K+ + S + + +P WL + L+
Sbjct: 1199 EGKLRCGTEQLKKKKLHIPRMDALMQRHYDASTIHAATPRSFCPAPGPNRCWLYDLLDSE 1258
Query: 1194 RPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
V F+NTD + P E + + N E +++++ + L+ I +IG++T Y +Q
Sbjct: 1259 ARVRFINTDTIQPPVREEAQGKRIVNSAEVRIVSQLVESLLTIGIPDTEIGVMTHYRAQL 1318
Query: 1252 NLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALT 1309
+++ L + S VE+HT D++QGRDK+ I++S VRS+E C LL DW RINVA T
Sbjct: 1319 FMLKDKLKAFSGVEMHTTDRFQGRDKEVIVLSLVRSNE---ACNIGDLLKDWRRINVAFT 1375
Query: 1310 RAKKKLIMVGSCRTL 1324
RAK KL++VGS TL
Sbjct: 1376 RAKTKLLVVGSKSTL 1390
>gi|146323861|ref|XP_751610.2| DNA replication helicase Dna2 [Aspergillus fumigatus Af293]
gi|129557499|gb|EAL89572.2| DNA replication helicase Dna2, putative [Aspergillus fumigatus Af293]
Length = 1657
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 357/1014 (35%), Positives = 566/1014 (55%), Gaps = 109/1014 (10%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P +VL + +E++ ++AV L E WF + + G +++ G+FD G+C V +N +I+HP
Sbjct: 560 PEQVLLVQDERTKNKKAVILRESWFDSPCSKGAYIHLTGDFDAAGQCIVDDAHNMIILHP 619
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA S SC RR+VL +R+K S+ S + G + H+ FQ + +K L
Sbjct: 620 DHLISATVVADSISCQRRAVLQDRIKNSSDISKPQVFGNIFHEFFQEAMKVNKWDLKSLR 679
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
+L +++E LY + + + ++ +P + W +F V+
Sbjct: 680 ALVEAILVRHVEDLYLIQMTVPEAVEYMMSRVPALKGWAEVFLRPTPSAESIVEDRHSSK 739
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
L I+++ ++EE W+P YGLKG IDA+++V N +++PLE KTG N +
Sbjct: 740 VNLSINKLLEVEEHIWSPMYGLKGNIDATVQVACNDGEGNRN-LVVPLELKTG---NRDT 795
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
+ HRAQ LYTLL+S+RY + GLLYYL+ + + R +L+ +I RN A +
Sbjct: 796 NQAHRAQTALYTLLLSDRYDVDVTFGLLYYLEISKIFRIRGVRHELLQMIQERNRLAGFV 855
Query: 689 IKASTTQQLPPMLRAYG--------------------GNKECSGLGNMFDSHIYHLTTAH 728
QLPPM++ G G+ E SGLG+ F + +LT H
Sbjct: 856 ---RERLQLPPMVKKPGMCNRCYSKTPCLIYHKLADDGDGETSGLGDEFVKAMDYLTPQH 912
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
F + WD L+ E + M K E+W S C ++V+ ++ E ++S + N
Sbjct: 913 RDFFKKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRCFGNVVIQPGSAYEDKESTKIN 972
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y FV++H P P+ + ++ L G+ +++S E A+A+G +
Sbjct: 973 RFRYTFVKKH-PLPSFSFTESQ---------------LTVGEPIVVSDEKGHFALANGYV 1016
Query: 847 TEISRFHVSVSFSKPL-----RLPGRNSSSD----------ADSLL-----HE-----VW 881
++S H+ V+ + L + G ++S + D L HE ++
Sbjct: 1017 VQVSPKHIIVAVDRRLHNTRTKTKGFDASKNQSFRGIAELLGDGPLPSATSHEPEEEILY 1076
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFD-SGSVFSQDPALSYI 939
R+DKDE +++R NL+ + + Q+++LR++IV+ E P F S S F +
Sbjct: 1077 RLDKDEFSNGMAIVRNNLICMMEKDLFQANRLRKLIVEGETPIFKPSPSAFPLSDS---- 1132
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
++ SLN DQ+RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++
Sbjct: 1133 -AKASLNVDQKRAIEKVMSARDYALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYTHT 1191
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTC 1058
AVDN+L+K++ + +RIG VH E+Q+ L+A+ ++VEE+K ++ +VVA TC
Sbjct: 1192 AVDNILLKIRDDNFRILRIGATAKVHTEVQQFVDLAAVPKSTVEELKASYEESQVVATTC 1251
Query: 1059 LGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN 1118
LG+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ +A+E
Sbjct: 1252 LGVNHNIFNRRVFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLVQNKQAQEG 1311
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
G+++SLF+ LS+ HP+++ L+ QYRMC+ IM LSN LIY RL CG+ +A+ + + +
Sbjct: 1312 GLDVSLFKLLSDAHPESVVNLEHQYRMCEDIMVLSNNLIYSGRLKCGTPAVASRSLDLPN 1371
Query: 1179 LSSCS------------------------PWLKEALNPCRPVIFVNTDML--PAYEAKDH 1212
+ WL++ L+P F+NTD L PA + +
Sbjct: 1372 IGGLKLHHINQLPQSSNQRQFCLGTNQGRCWLRDVLDPSAKNRFINTDTLGIPARDVANG 1431
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDK 1270
+ NP E+ + A++ + LV I ++IG+IT Y SQ +L++ +L + +E+HT DK
Sbjct: 1432 TMIVNPTESSICAQLVESLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADK 1491
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+QGRDK+ +L+S VRS N N LL DW RINVA TRA+ KL+++GS TL
Sbjct: 1492 FQGRDKEVVLLSCVRS--NVDNNVGDLLRDWRRINVAFTRARTKLLVIGSKSTL 1543
>gi|159125465|gb|EDP50582.1| DNA replication helicase Dna2, putative [Aspergillus fumigatus A1163]
Length = 1657
Score = 601 bits (1549), Expect = e-169, Method: Compositional matrix adjust.
Identities = 357/1014 (35%), Positives = 566/1014 (55%), Gaps = 109/1014 (10%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P +VL + +E++ ++AV L E WF + + G +++ G+FD G+C V +N +I+HP
Sbjct: 560 PEQVLLVQDERTKNKKAVILRESWFDSPCSKGAYIHLTGDFDAAGQCIVDDAHNMIILHP 619
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA S SC RR+VL +R+K S+ S + G + H+ FQ + +K L
Sbjct: 620 DHLISATVVADSISCQRRAVLQDRIKNSSDISKPQVFGNIFHEFFQEAMKVNKWDLKSLR 679
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
+L +++E LY + + + ++ +P + W +F V+
Sbjct: 680 ALVEAILVRHVEDLYLIQMTVPEAVEYMMSRVPALKGWAEVFLRPTPSAESIVEDRHSSK 739
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
L I+++ ++EE W+P YGLKG IDA+++V N +++PLE KTG N +
Sbjct: 740 VNLSINKLLEVEEHIWSPMYGLKGNIDATVQVACNDGEGNRN-LVVPLELKTG---NRDT 795
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
+ HRAQ LYTLL+S+RY + GLLYYL+ + + R +L+ +I RN A +
Sbjct: 796 NQAHRAQTALYTLLLSDRYDVDVTFGLLYYLEISKIFRIRGVRHELLQMIQERNRLAGFV 855
Query: 689 IKASTTQQLPPMLRAYG--------------------GNKECSGLGNMFDSHIYHLTTAH 728
QLPPM++ G G+ E SGLG+ F + +LT H
Sbjct: 856 ---RERLQLPPMVKKPGMCNRCYSKTPCLIYHKLADDGDGETSGLGDEFVKAMDYLTPQH 912
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
F + WD L+ E + M K E+W S C ++V+ ++ E ++S + N
Sbjct: 913 RDFFKKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRCFGNVVIQPGSAYEDKESTKIN 972
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y FV++H P P+ + ++ L G+ +++S E A+A+G +
Sbjct: 973 RFRYTFVKKH-PLPSFSFTESQ---------------LTVGEPIVVSDEKGHFALANGYV 1016
Query: 847 TEISRFHVSVSFSKPL-----RLPGRNSSSD----------ADSLL-----HE-----VW 881
++S H+ V+ + L + G ++S + D L HE ++
Sbjct: 1017 VQVSPKHIIVAVDRRLHNTRTKTKGFDASKNQSFRGIAELLGDGPLPSATSHEPEEEILY 1076
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFD-SGSVFSQDPALSYI 939
R+DKDE +++R NL+ + + Q+++LR++IV+ E P F S S F +
Sbjct: 1077 RLDKDEFSNGMAIVRNNLICMMEKDLFQANRLRKLIVEGETPIFKPSPSAFPLSDS---- 1132
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
++ SLN DQ+RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++
Sbjct: 1133 -AKASLNVDQKRAIEKVMSARDYALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYTHT 1191
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTC 1058
AVDN+L+K++ + +RIG VH E+Q+ L+A+ ++VEE+K ++ +VVA TC
Sbjct: 1192 AVDNILLKIRDDNFRILRIGATAKVHTEVQQFVDLAAVPKSTVEELKASYEESQVVATTC 1251
Query: 1059 LGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN 1118
LG+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ +A+E
Sbjct: 1252 LGVNHNIFNRRVFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLVQNKQAQEG 1311
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
G+++SLF+ LS+ HP+++ L+ QYRMC+ IM LSN LIY RL CG+ +A+ + + +
Sbjct: 1312 GLDVSLFKLLSDAHPESVVNLEHQYRMCEDIMVLSNNLIYSGRLKCGTPAVASRSLDLPN 1371
Query: 1179 LSSCS------------------------PWLKEALNPCRPVIFVNTDML--PAYEAKDH 1212
+ WL++ L+P F+NTD L PA + +
Sbjct: 1372 IGGLKLHHINQLPQSSNQRQFCLGTNQGRCWLRDVLDPSAKNRFINTDTLGIPARDVANG 1431
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDK 1270
+ NP E+ + A++ + LV I ++IG+IT Y SQ +L++ +L + +E+HT DK
Sbjct: 1432 TMIVNPTESSICAQLVESLVSCGIPARNIGVITFYRSQLSLLKQNLRRYLPELEMHTADK 1491
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+QGRDK+ +L+S VRS N N LL DW RINVA TRA+ KL+++GS TL
Sbjct: 1492 FQGRDKEVVLLSCVRS--NVDNNVGDLLRDWRRINVAFTRARTKLLVIGSKSTL 1543
>gi|295669542|ref|XP_002795319.1| DNA replication ATP-dependent helicase dna2 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226285253|gb|EEH40819.1| DNA replication ATP-dependent helicase dna2 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1492
Score = 601 bits (1549), Expect = e-168, Method: Compositional matrix adjust.
Identities = 360/1015 (35%), Positives = 560/1015 (55%), Gaps = 115/1015 (11%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
+VL + E++ RA+ L E WF T G +++IG FD G+C V +N +I+HPD
Sbjct: 377 QVLFVEEEKTKINRAITLRESWFDTPCTKGSYIHLIGSFDPTGQCVVNNSDNIIILHPDH 436
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE + + G +LH+IFQA + +++L E
Sbjct: 437 LLSATVVADSFTCQRRAVLQDRVKATSEANKPQVYGHILHEIFQAAMTANRWDLQWLREV 496
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L++ +ESLY V+ + + L+ +P + +W +F S+ ++ + +
Sbjct: 497 ISRTLERYVESLYEIQVDFPEATEYLMSKMPSLRSWADMFVRSRPTTESIMEDRNGTSSR 556
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+ I+++ ++EE W+P YGLKG IDA+++V ++ + E + +PLE KTG+ ++
Sbjct: 557 MSINKLLEVEEHIWSPMYGLKGNIDATVQVVVQ-EGTEQKTLTVPLEVKTGR---NNTNE 612
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+LYYL+ +T V R+++ +I +RN + + +
Sbjct: 613 AHRAQTALYTLLLSDRYDIDVTFGILYYLEVTKTSRVRAIRTEIRQMIQQRNRLSEFVCQ 672
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
T +LPPML+ Y G+ E S LGN F + HLT +H
Sbjct: 673 ---TSKLPPMLKKPRICNQCYAKNACFTYHKIMDNGDGETSELGNSFLEVVGHLTPSHQV 729
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRF 788
F + WD L+ +E +++ + E+W S C +I+++ ++ E + + +RF
Sbjct: 730 FFKKWDALLTMEERDIMKFRRELWTMLSSEREAVGRCFGNIMVEPGSAYEETDAPKISRF 789
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F + P+ N S GDS L GD +++S E A+A G +T
Sbjct: 790 RYTFFKHQPPA---NFSFGDS-------------QLSVGDPIVVSDEKGHFALADGYVTH 833
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------------VW 881
ISR +SV+ + L R S+ D+ H+ ++
Sbjct: 834 ISRKRISVTLDRRLH-NARTRCSNFDADRHQAFIGIMEVVETGGRESTISPEKAEDKNMY 892
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFD--SGSVFSQDPALSY 938
R+DKDE + + +R NLV + + Q+ +LR +I+D AP F S S S
Sbjct: 893 RLDKDEFSSGMATVRNNLVCMMDNTMLQAKRLRDVIIDGRAPSFKPTSSSTVSS------ 946
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ LN DQ++AI KV+ A DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT+
Sbjct: 947 -LANAELNVDQKQAINKVMRANDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTH 1005
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K+K +I +R+G +H ++QK L+A ++EE++ + VVA T
Sbjct: 1006 TAVDNILLKIKDDNIRTLRLGATTKIHPDVQKFADLAATPKKTIEELRDIYENSLVVATT 1065
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ ++ F+ CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ EA+E
Sbjct: 1066 CLGINHPIFNNRIFNYCIVDEASQITLPVCLGPIRMAKAFILVGDHYQLPPLVQDKEAQE 1125
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ L + P ++ L+ QYRMC+ IM LSN LIY L CG+ +A++ +K+
Sbjct: 1126 GGLDVSLFKLLCDLQPASVVNLEHQYRMCEDIMLLSNTLIYSGHLKCGTPAVASSYLKIP 1185
Query: 1178 DL---------SSCSP---------------WLKEALNPCRPVIFVNTDML--PAYEAKD 1211
+L SS P W+++ L+P VNTD L A E
Sbjct: 1186 NLNGLKQHHVNSSSLPSNIRSPCLGSRYGHCWIRDLLDPVAKARLVNTDFLVPQAKEFSK 1245
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTID 1269
+ N +EA L A++ + I +DIG+IT Y SQ L++ +L + +E+HT D
Sbjct: 1246 GSRIINSIEATLCAQLVDSFISVGIPARDIGVITLYRSQLALLKQNLRHYLPDLEMHTAD 1305
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK+ I++S VRS N L DW R+NVA TRAK KL+++GS TL
Sbjct: 1306 RFQGRDKEIIIMSCVRS--NSERNVGELFRDWRRVNVAFTRAKTKLLIIGSKDTL 1358
>gi|154292679|ref|XP_001546910.1| hypothetical protein BC1G_14724 [Botryotinia fuckeliana B05.10]
Length = 1615
Score = 600 bits (1548), Expect = e-168, Method: Compositional matrix adjust.
Identities = 357/981 (36%), Positives = 545/981 (55%), Gaps = 110/981 (11%)
Query: 424 VNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS-ERSIS 482
V++IG+FD QG C + + +I+HPD L+S VA SF C RR+VL +R+K + E S +
Sbjct: 530 VHIIGKFDAQGICVIDDNSGLIILHPDHLISALVVADSFGCTRRAVLQDRVKATGEASPA 589
Query: 483 ALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPK 542
L GT+LH+IFQA ++ FL E + Q+++E LY V + L + +
Sbjct: 590 MLYGTILHEIFQAAMLVNRWDRMFLGELIDKLAQRHLEDLYVIKVEIPQAVEYLHSKMGE 649
Query: 543 MLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI 602
+ W LF SQ V G+ + +S + D+EE W+P YGLKG IDA++++ +
Sbjct: 650 LQAWAELFVSSQPKPGALVKAGNGDTVAMCVSNLLDVEEHVWSPMYGLKGNIDATVQITM 709
Query: 603 ESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSD 662
++ + + P E KTGK P S+ +RAQ LY LL+S+RY I G+LYY+++
Sbjct: 710 RDEKGQ-RTLTAPFEVKTGKNP----SVANRAQTALYNLLISDRYDVEIAYGILYYMETS 764
Query: 663 QTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR-------------------- 702
+T + R +L +IM+RNE A + + + QLPPML+
Sbjct: 765 ETIRIPAIRHELRHMIMQRNELACYVREKNA--QLPPMLKKENMCGRCYAKNTCFIYHKL 822
Query: 703 AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGN 762
A GN E SG+ FD + HLT H F WD L+ E K+ + E+W S
Sbjct: 823 ADDGNGETSGMKEKFDEVVKHLTPKHKEFFLKWDDLLTKEEKDSLKFRRELWTMLSSERE 882
Query: 763 HFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDM 820
C S+++++ ++ E Q + + NR+ Y ++ P A+ G S M
Sbjct: 883 KLGRCFSNVIIEEGSAYEDQNNEKINRYRYTMIK-----PKNTAAPGFSF---------M 928
Query: 821 DCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRN------- 868
D + G+ +++S E A+A G +T + + ++V+ + L R PG +
Sbjct: 929 DSQIIVGEPIVISDEKGHFALAKGYVTNVRKNRITVAVDRRLHNARIRQPGFDETNNQVF 988
Query: 869 ---------SSSDADSL--LHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLR 913
S+ ADS+ + E ++R+DKDE + +R NL+Q+ + S ++R
Sbjct: 989 ASIMEVAAEGSTPADSIGKIREDPILYRLDKDEFSNGLATVRNNLIQIMTEGPFGSREIR 1048
Query: 914 RMIVDLEAPRFDSGSVFSQDPALSYIWSEKS-LNDDQRRAIIKVLTAKDYALILGMPGTG 972
++VDL PRF S Y ++S +N DQRRAI KV++A+DYAL+LGMPGTG
Sbjct: 1049 SLVVDLNPPRFKPHST-------QYTLKDRSCINVDQRRAIEKVMSAQDYALVLGMPGTG 1101
Query: 973 KTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
KT+T+ H ++AL+ +G S+LLTSYT++AVDN+L+KL+ SI +R+G +H ++Q+
Sbjct: 1102 KTTTIAHIIRALVSQGKSVLLTSYTHTAVDNILLKLRDDSIPILRLGTKAKIHPDVQEFA 1161
Query: 1033 LSAMN-INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
A++ ++EEI+ ++A +CLGI +P+ ++ FD CI+DEA Q TLPV +GP+
Sbjct: 1162 KLAVDPKETMEEIRSVWHDTPIIATSCLGINHPIFNERTFDYCIVDEASQITLPVCVGPI 1221
Query: 1092 MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIME 1151
A F+LVGDH QLPPLV+ EAR+ G++ISLF+ LS+ HPQ++ L+ QYRM +M
Sbjct: 1222 RLARTFILVGDHNQLPPLVKDEEARKGGLDISLFKYLSDAHPQSVVYLEHQYRMNADVMA 1281
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-------------------------WL 1186
LSN LIY RL CGS +AN KI + D+ + WL
Sbjct: 1282 LSNTLIYNGRLKCGSTSVANRKIIIPDMDALKANHHTPSSVLHSTQKSICLEPKKGRCWL 1341
Query: 1187 KEALNPCRPVIFVNTDMLP--AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
++ L+P V FV+TD L A E++ N VEA ++ ++ L+ ++ +IG++
Sbjct: 1342 RDLLDPDVTVAFVDTDSLGDMARESEKGNRTVNDVEARIVTQLVTSLIAVGVDPTEIGVM 1401
Query: 1245 TPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
T Y SQ L++ SL + VE+HT D++QGRDK+ I++S VRS+E LL DW R
Sbjct: 1402 THYRSQLALLKDSLHNAKGVEMHTADRFQGRDKEVIVLSLVRSNEG--GSIGELLKDWRR 1459
Query: 1304 INVALTRAKKKLIMVGSCRTL 1324
INVA TRAK KL++VGS TL
Sbjct: 1460 INVAFTRAKTKLLVVGSRGTL 1480
>gi|345570486|gb|EGX53307.1| hypothetical protein AOL_s00006g173 [Arthrobotrys oligospora ATCC
24927]
Length = 1712
Score = 600 bits (1547), Expect = e-168, Method: Compositional matrix adjust.
Identities = 377/1066 (35%), Positives = 573/1066 (53%), Gaps = 120/1066 (11%)
Query: 353 GVPTDPPENVNGTSS---CHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHL 409
G DP E V T S F+VL+V E + + A P K LR+ +E++ ER V L
Sbjct: 576 GSDFDPDEIVKDTKSRAIQRFVVLDVFEDDYISS-AGATRPEKALRVEDEKTRTERRVLL 634
Query: 410 WEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSV 469
+ W + GD VNVIG FD C + N LI+HPD+L+S T VA SF C R +
Sbjct: 635 RQAWMDCDVREGDIVNVIGSFDATLTCIIDNSQNMLILHPDILLSATAVADSFDCIRLAT 694
Query: 470 LDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVN 528
L ER+K S+ S ++ G +LH++FQ L + FLE+ +L + +LYA V
Sbjct: 695 LRERVKAISDASQWSVYGNILHEVFQMALSANDFSTSFLEKEISRILLAQMVNLYAVRVT 754
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKY 588
+ L +P + +W LF ++ V + I +V D+EE W+PK+
Sbjct: 755 PSMAIDHLRTQLPLLQDWAKLFVSAKPKPDAMVKGHRSADANIAIRKVLDVEEHIWSPKF 814
Query: 589 GLKGMIDASIRVKIESKRNEING---MILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSE 645
GLKG ID ++ V + +ING + +PLE KTGK + + HRAQ +LYTLLM++
Sbjct: 815 GLKGNIDVTVEVDVR----DINGQSVLTVPLELKTGK----NAKIAHRAQTMLYTLLMAD 866
Query: 646 RYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML---- 701
RY G+LYY++ +T V +L GL++ RN A I LPPML
Sbjct: 867 RYDIESLCGVLYYMEKAETIRVPNLSDELRGLMIGRNHLARYIY---GKIDLPPMLQDKR 923
Query: 702 ---RAYG-------------GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKE 745
R Y G +E SG+G++F HL H F W+ L+ E K+
Sbjct: 924 MCGRCYAKTTCFVYHKTMENGTEETSGVGDVFTKEASHLNQTHAEFFSKWETLLSKEEKD 983
Query: 746 MQVVKNEIWC----SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPN 801
M+ + E+W R + G F G L I A + + NR+ Y FV++ P P+
Sbjct: 984 MERFRKELWVMTSEEREAAGRCFGG-LKMIPESAPTSNDNVSKINRYHYRFVKR-TPPPS 1041
Query: 802 LNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP 861
S +S IG G+ +++S E A+A G + ++S + V+ +
Sbjct: 1042 F--SFLESQIGV-------------GEAIVISDEDGHFALAKGFVIKVSAQWIMVAVDRR 1086
Query: 862 L-----RLPGRNSSSDAD-SLLHEV--------------------WRIDKDEIMTSFSVM 895
L + PG + + + S + E+ +R+DKDE +++
Sbjct: 1087 LHNSRVKEPGFHETKNQTFSAIMEILEDGSTKPLPPLSSQEGLVSYRLDKDEFSNGVALI 1146
Query: 896 RYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
R NLV+L +++ + +LR +IV+L P ++ S P+ S + +N DQ+ AI K
Sbjct: 1147 RNNLVEL-VKADGNPRLREVIVELAPPVYNLESTAYPLPSAS----QDKINIDQKNAIEK 1201
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS-QSID 1014
V++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G ++LLTSYT++AVDN+L+K+K + I
Sbjct: 1202 VMSAQDYALVLGMPGTGKTTTIAHIIRALVHQGKTVLLTSYTHTAVDNILLKIKDDRPIK 1261
Query: 1015 FVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
+R+G +H E+QK L+ +EI+ +VVA TCL I + + T++ FD
Sbjct: 1262 VLRLGATSKIHPEVQKFAVLANTPKKCFDEIQDAYHSPQVVATTCLSINHVVFTERVFDY 1321
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
CI+DEA Q TLPV +GP+ A KFVLVGDH+QLPPLV+S+EA+ G+++SLF+ LS+ HP
Sbjct: 1322 CIVDEASQITLPVCVGPIRMAKKFVLVGDHFQLPPLVRSSEAKAGGLDVSLFKLLSDAHP 1381
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP--------- 1184
++ L+ QYRMC+ IM LSN LIY RL CG++++A + + + ++ +
Sbjct: 1382 DSVVNLEHQYRMCEDIMALSNHLIYEGRLKCGTEKVAKSSLHIPNIKALEAFHRPSSSGG 1441
Query: 1185 ---------------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
W+++ L +F+NTD++ A E K NP+EA L ++ +
Sbjct: 1442 VAEGGKMCGGDGTPCWIRDLLKEDVKAMFLNTDLVAAPEEKKGDRTYNPIEAELTRQLVE 1501
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
++ ++ +IG+++ Y SQ I+H L SVE+HT DK+QGRDKDCI++S VRS
Sbjct: 1502 GFLRCGVDANEIGVVSVYRSQIKAIQHLLHGHPSVEMHTADKFQGRDKDCIIISLVRS-- 1559
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
N + LL DW RINVA TRAK KL+++GS TL LL+ +
Sbjct: 1560 NDKEVVGELLKDWRRINVAFTRAKTKLLIIGSKSTLKTNELLRKFV 1605
>gi|46135987|ref|XP_389685.1| hypothetical protein FG09509.1 [Gibberella zeae PH-1]
Length = 1562
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 365/1037 (35%), Positives = 558/1037 (53%), Gaps = 117/1037 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E D P K+L + + S + + VHL WF T V+VIG+
Sbjct: 463 YLVTNVLEDEH-TDQYGNARPEKILLIQADNSKDIKTVHLRGSWFDTPAHADAYVHVIGD 521
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F +G+C V N LI+HPD L+S T VA SF C RR+VL +R+K + L+ GT+
Sbjct: 522 FTARGQCVVDDAQNLLILHPDQLISATVVADSFGCMRRAVLQDRVKATSPPTPPLIYGTM 581
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+IFQ L+ + FL + +K++E LY V + L + ++ W
Sbjct: 582 LHEIFQEALLANQWDLPFLCRVIERITEKHVEDLYTIKVGIPSAREHLQSKMTELSYWAG 641
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
F SQ V+ + + ++++ D+EE W+P YGLKG IDA++ V ++ +N
Sbjct: 642 SFVSSQAKPDAVVEDRNGKKANMAVTKLLDVEEHVWSPMYGLKGNIDATVEVAMQDGKN- 700
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ + +P E KTGK N H AQ LYTLL+S+RY I G+LYY+++ +T +
Sbjct: 701 VRTLTVPFEVKTGKHANSN----HMAQTALYTLLLSDRYDIEIAYGILYYMETSKTMRIP 756
Query: 669 VQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGNK 708
R +L +IM+RN+ A + + S QLPPML+ A G+
Sbjct: 757 AIRHELRHMIMQRNQLACYVRERSV--QLPPMLKSKHMCGKCYAKTSCFIYHRLADDGDG 814
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E SG+ FD + HLT H F W+ L+ E KE Q K E+W + C
Sbjct: 815 ESSGMHEKFDELVKHLTPHHQQFFIKWENLLTKEEKESQKTKRELWTMTSVEREKKSRCF 874
Query: 769 SSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
+ ++++ +++ + + NR+ Y F+++ N G S ++ L
Sbjct: 875 ADVIIEEGSASVDTDNPKINRYHYTFIKR-------NPITGFSF---------LESELTV 918
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV------ 880
G+ +++S E A+A G +T + R +SV+ + L R D + ++V
Sbjct: 919 GEPIVVSDEDGHFALAIGYVTAVKRQRISVAVDRRLH-NARIRQHGFDEVDNQVFASIMD 977
Query: 881 ---------------------WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVD 918
+R+D+DE + +R NLVQ+ + Q+RR+IVD
Sbjct: 978 VAHEGATQDESTGKIKEAPIRYRLDQDEFSNGMATVRNNLVQMMADDVFGARQIRRLIVD 1037
Query: 919 LEAPRFDSGSVFSQDPALSYIWSEK-SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTM 977
LEAPRF + Y S++ +LN DQRRAI KV++A+DYAL+LGMPGTGKT+T+
Sbjct: 1038 LEAPRFKAAPT-------QYTMSDRDNLNVDQRRAIEKVMSAQDYALVLGMPGTGKTTTI 1090
Query: 978 VHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAM 1036
H ++AL +G S+LLTS+T++AVDN+L+KLKS I +R+G VH ++Q+ L+
Sbjct: 1091 AHIIQALTSQGKSVLLTSHTHTAVDNILLKLKSDKIPILRLGAPAKVHPQVQEFATLAGH 1150
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
+ S EEIK+ +VA TCLGI +P+ ++ FD CI+DEA Q TLP+ GP+ A
Sbjct: 1151 PMKSFEEIKEAWHGTPIVATTCLGINHPIFHERTFDYCIVDEASQITLPICAGPIRMART 1210
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPP+V++ EARE G+++SLF+ LS+ HP+++ L+ QYRMC+ IM LSN L
Sbjct: 1211 FVLVGDHNQLPPVVKNEEAREGGLDVSLFKLLSDTHPESVVNLEHQYRMCEDIMTLSNTL 1270
Query: 1157 IYGDRLSCGSDEIANAKIKV-------------SDLSSCSP------------WLKEALN 1191
IY +L CG++++ K+ + S + + P WL + L+
Sbjct: 1271 IYEGKLRCGTEQLKKKKLHIPRMDALVQRHYDASTIHAAMPRSFCPAPGPDRCWLYDLLD 1330
Query: 1192 PCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
V F+NTD + P E + + N E +++++ + L+ I +IG++T Y +
Sbjct: 1331 SEARVRFINTDTIQPPVREEAQGKRIVNSAEVRIVSQLVESLLTIGIPDTEIGVMTHYRA 1390
Query: 1250 QANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVA 1307
Q +++ L + S VE+HT D++QGRDK+ I++S VRS+E C LL DW RINVA
Sbjct: 1391 QLFMLKDRLKAFSGVEMHTTDRFQGRDKEVIVLSLVRSNE---ACNIGDLLKDWRRINVA 1447
Query: 1308 LTRAKKKLIMVGSCRTL 1324
TRAK KL++VGS TL
Sbjct: 1448 FTRAKTKLLVVGSKSTL 1464
>gi|255947606|ref|XP_002564570.1| Pc22g05360 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591587|emb|CAP97824.1| Pc22g05360 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1667
Score = 597 bits (1540), Expect = e-167, Method: Compositional matrix adjust.
Identities = 366/1024 (35%), Positives = 557/1024 (54%), Gaps = 120/1024 (11%)
Query: 384 PVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
P P + L + +E++ E + + L E WF T + ++++G+F+ G+C V N+
Sbjct: 563 PKGRTQPEQSLLVEDEKTRERKTIILRESWFDTPCSKDSYIHLVGDFNAAGQCVVDNLNH 622
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISAL-----LGTLLHQIFQAGLM 498
+I+HPD L+S T VA S C RR+VL +R+K I+AL G H++FQ L
Sbjct: 623 MIILHPDHLISATVVADSIDCQRRAVLQDRVKV----IAALERPQAFGVFFHEVFQEALK 678
Query: 499 KEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNT 558
M+ L+ V+ ++IE LY+ ++ + + L+ +P +L+W F +
Sbjct: 679 ANQWDMESLKTLVETVMGRHIEELYSVQMSVPEAVEYLMSRMPAVLDWADAFLHLKPQAK 738
Query: 559 PTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEF 618
V+ ++ L I+++ ++EE W+P YGLKG IDA+++V + E N +++PLE
Sbjct: 739 SMVEDRNNSKLNLSINKLLEVEEHIWSPMYGLKGNIDATVQVTCREDKMEKN-LVVPLEL 797
Query: 619 KTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLI 678
KTG+ QS HRAQ LYTLLMS+RY + GLLYYL+ +T + R +L+ +I
Sbjct: 798 KTGRRDTNQS---HRAQTALYTLLMSDRYDIDVTFGLLYYLELTKTLSIRGVRHELLQMI 854
Query: 679 MRRNEFANDIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFD 718
RN A I + QQLPPMLR + G+ E S LG FD
Sbjct: 855 QVRNHLAGYIRE---RQQLPPMLRKARQCIRCYARTPCLIYHKLSEDGDGETSALGEDFD 911
Query: 719 SHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN- 777
+ + HL F R WD L+ E + + E+W S C +V+D ++
Sbjct: 912 AAVGHLNNGDRDFFRKWDELLTKEEGNLVKFRRELWTLLSSEREALGRCFGDVVIDPNSV 971
Query: 778 -EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
E + NR+ Y F+++ AS G S + I G+ +++S E
Sbjct: 972 YEENTGTKINRYHYTFIKRQ-------ASPGFSFAESQITV---------GEPIVISDEK 1015
Query: 837 DRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE----------------- 879
A+A+G + S H+ V + L R+ ++ D++ ++
Sbjct: 1016 GHFALANGYVVHTSSTHIKVGVDRKLH-NARSRTAGFDAVTNQSFKGIMEVGKEEPAALE 1074
Query: 880 ------VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQ 932
V+RIDKDE +++R NL+ + + Q+ QLRR+IV+ +AP F + S
Sbjct: 1075 DPGEQLVYRIDKDEFSNGMAIVRNNLICMMDKDLFQARQLRRLIVEGQAPAFKTTSS--- 1131
Query: 933 DPALSY-IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
SY I +LN DQR+AI KV++AKDYAL+LGMPGTGKT+T+ H ++AL+ +G S+
Sbjct: 1132 ----SYAITDSGNLNVDQRQAIDKVMSAKDYALVLGMPGTGKTTTIAHIIRALVAQGKSV 1187
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQ 1050
LLTSYT++AVDN+L+K++ I +RIG VH ++Q+ L+A+ +++EE+K ++
Sbjct: 1188 LLTSYTHTAVDNILLKIRDDDIRVLRIGATAKVHPDVQEFADLAAIPKSTIEELKDSYEK 1247
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VVA TCLG+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLV
Sbjct: 1248 PQVVATTCLGVNHNIFNQRIFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLV 1307
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
Q+ A+E G+++SLF+ LS+ P ++ L+ QYRMC+ +M LSN LIY RL CG+ ++A
Sbjct: 1308 QNKAAQEGGLDVSLFKLLSDAQPDSVVNLEHQYRMCEELMLLSNTLIYSGRLKCGTPQVA 1367
Query: 1171 ---------NA--KIKVSDLS---------------SCSPWLKEALNPCRPVIFVNTDML 1204
NA K V D S S + WL++ L P VNTD +
Sbjct: 1368 ARSLDIPNINALDKFHVEDFSRAQSQSQREICPGTLSSACWLQDLLRPSAKTRLVNTDPI 1427
Query: 1205 --PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--V 1260
A E + N +E L +++ + + + ++IG+IT Y SQ +LIR SL
Sbjct: 1428 GPAALEIAQGNRVVNHMEVFLCSQLVESFIACGVPARNIGVITFYRSQLSLIRQSLRSYT 1487
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+E+HT DK+QGRDK+ I++S VRS N N LL DW R+NVA TRA+ KL++VGS
Sbjct: 1488 PDLEMHTTDKFQGRDKEVIILSCVRS--NAENNVGELLRDWRRVNVAFTRAQTKLLVVGS 1545
Query: 1321 CRTL 1324
TL
Sbjct: 1546 RSTL 1549
>gi|317026211|ref|XP_001389173.2| DNA replication helicase Dna2 [Aspergillus niger CBS 513.88]
Length = 1660
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 383/1111 (34%), Positives = 594/1111 (53%), Gaps = 131/1111 (11%)
Query: 306 AFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGA--------GMLLEA--NSVVNGVP 355
AF + + +VK + A+ EA++ K +++ + G+ +EA S+V+
Sbjct: 477 AFRQSIPEVKSGDYLGAT----SEAFIQKKGEQDASFGDEFDDDGLDIEAIEQSMVHSGA 532
Query: 356 TDPPENVNGTSSC-HFLVLEVSEKNRPADPVDAK-SPYKVLRLLNEQSGEERAVHLWEDW 413
+NV + +L+++++E + + P ++L + +E+S E++ V L E W
Sbjct: 533 DATNDNVRSRQAIKRYLIVDIAESAYKT--IKGRVQPEQMLSVQDERSKEKKVVILRESW 590
Query: 414 FHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDER 473
+++IG+FD G C V N +I+HPD LVS T VA S SC RR+VL +R
Sbjct: 591 CECPCVKESYIHLIGDFDATGHCIVDDSRNMVILHPDHLVSATVVADSISCQRRAVLQDR 650
Query: 474 LK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDI 532
+K SE + + G + H++FQ + L V K IE LY + +
Sbjct: 651 IKYTSELGKAQVFGNIFHEVFQEAIKLNKWDTNSLRTLIEGVTVKRIEDLYLIRMTIPEA 710
Query: 533 HKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKG 592
+ ++ IP + W F + V+ + L I+++ ++EE W+P YGLKG
Sbjct: 711 VEYMMSRIPGVQAWAERFLRLKPSAESLVEDRGNSKLSLSINKLLEVEEHIWSPMYGLKG 770
Query: 593 MIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID 652
+DA+++V ++ N +++PLE KTG N ++ HRAQ LYTLL+S+RY
Sbjct: 771 NVDATVQVACHDGESDKN-LVVPLELKTG---NRDTNQAHRAQTALYTLLLSDRYDVECT 826
Query: 653 SGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR---------- 702
GLLYYL++ + + R +L+ +I +RN + + + LPPM +
Sbjct: 827 FGLLYYLETTKIFRIRGIRHELLQMIQQRNRIVGYMRQRT---HLPPMAKKSSFCNKCYS 883
Query: 703 ----------AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE 752
A G+ E SGLG+ F + + HLT F R WD L+ E K M K E
Sbjct: 884 KTPCFIYHKLADDGDGETSGLGDDFVNAMDHLTPDDRDFFRKWDDLLTKEEKSMIRFKRE 943
Query: 753 IWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVR-QHMPSPNLNASDGDS 809
+W S C ++V+D +S E + + NR+ Y F++ Q PS + S
Sbjct: 944 LWTMLSSEREALGRCFGNVVIDPNSSYEEKDGPKINRYRYTFIKKQAHPSFSFTESQ--- 1000
Query: 810 LIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RL 864
L G+ +++S E A+A+G + ++SR H++V+ + L R
Sbjct: 1001 --------------LTLGEPIVVSDEKGHFALANGYVVQVSRRHITVAVDRRLHNARTRA 1046
Query: 865 PG----RNSS--------------SDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQS 906
G RN S S A+S V+R+DKDE +++R NLV + +
Sbjct: 1047 RGFDATRNQSFKGIMEILEDGASPSPAESEEEPVYRLDKDEFSNGMAIVRTNLVSMMERD 1106
Query: 907 A-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK---SLNDDQRRAIIKVLTAKDY 962
Q+ QLRR+IV EAP F + A +Y SE +LN DQR+AI KV+ A+DY
Sbjct: 1107 LFQARQLRRLIVKREAPAFKTT-------ASAYTLSESDKAALNVDQRQAIDKVMCAEDY 1159
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHE 1022
AL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++AVDN+L+K+K + +RIG
Sbjct: 1160 ALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYTHTAVDNILLKIKDDNFRILRIGAPA 1219
Query: 1023 VVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
VH ++Q+ L+A+ +++EE+K + +VVA TCLG+++ + T + FD CI+DEA Q
Sbjct: 1220 KVHPDVQQFAELAAVPKSTMEELKASYEDSQVVATTCLGVSHGIFTQRMFDYCIVDEASQ 1279
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP ++ L+
Sbjct: 1280 ITLPVCLGPIRMARTFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPDSVVNLEH 1339
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL---------------------- 1179
QYRMC+ IM LSN LIY RL CG+ ++A + V ++
Sbjct: 1340 QYRMCEDIMLLSNTLIYSGRLKCGTADVAVRSLTVPNIGGLKQHHPSTFPQPRSQRQVCL 1399
Query: 1180 --SSCSPWLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNE 1235
S WLK+ + P VNTD L PA + + + NP EA + +++ + +
Sbjct: 1400 GTSQGRCWLKDLVEPSAKTRLVNTDTLSIPALDVANGSRIVNPTEATICSRLVEAFISCG 1459
Query: 1236 IEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
I + IG+I Y SQ +L++ +LS + +E+HT DK+QGRDK+ I++S VRS N
Sbjct: 1460 IPARSIGVIALYRSQLSLLKQNLSRYLPELEMHTADKFQGRDKEVIILSCVRS--NTDKN 1517
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1518 VGDLLRDWRRVNVAFTRARTKLLVVGSKSTL 1548
>gi|238503900|ref|XP_002383182.1| DNA replication helicase Dna2, putative [Aspergillus flavus NRRL3357]
gi|220690653|gb|EED47002.1| DNA replication helicase Dna2, putative [Aspergillus flavus NRRL3357]
Length = 1571
Score = 594 bits (1531), Expect = e-166, Method: Compositional matrix adjust.
Identities = 370/1057 (35%), Positives = 566/1057 (53%), Gaps = 139/1057 (13%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+++++E + + P KVL + +E++ +++ V L E WF + +++IG+
Sbjct: 485 YLIVDIAESTYTTEKGRLQ-PEKVLSVQDERTSQKKVVVLRESWFDSPCYKDSYIHLIGD 543
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTL 488
FD G C V N +I+HPD LVS T VA S C RR+VL +R+K + + G +
Sbjct: 544 FDTAGHCIVNNSYNMIILHPDHLVSATIVADSIGCQRRAVLQDRIKNTGDIGKPQVFGNI 603
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
H++FQ + + L +V+ K+IE LY ++ + ++ IP +++W
Sbjct: 604 FHEVFQEAMKANQWDIFSLRSLVEMVIVKHIEELYLIHMSIPEAIDYVMGKIPALISWAD 663
Query: 549 LF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
F K+ + D S L+ L I+++ ++EE W+P YGLKG IDA+++V
Sbjct: 664 TFLKEKPSAQSLVEDRNSSKLR-LSINKLLEVEEHIWSPMYGLKGNIDATVQVACHDGEG 722
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
N +++PLE KTG N ++ HRAQ LYTLL+S+RY + GLLYYL++ + +
Sbjct: 723 NKN-LVVPLELKTG---NRDTNHAHRAQTALYTLLLSDRYDVEVTFGLLYYLETSKIFRI 778
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG--------------------GN 707
R +L+ +I RN A + + + QLPPM++ G+
Sbjct: 779 RGIRHELLQMIQARNRVAGYMCRRT---QLPPMVKRQALCNKCFSKTPCFIYHKLVDDGD 835
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG+ F + HLT F R WD L+ E + M K E+W S C
Sbjct: 836 GESSGLGDEFVKAMDHLTPRDSDFFRKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRC 895
Query: 768 LSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
S+IV++ G+A KD L G
Sbjct: 896 FSNIVIEP------------------------------------GSAFEDKD---GLTVG 916
Query: 828 DYVILSTESDRLAVASGLITEISRFHVSV----------------------SFSKPLRLP 865
+ +++S E A+A+G + ++S +SV +F + +P
Sbjct: 917 EPIVISDEKGHFALANGYVVQVSPQRISVAVDRRLHNARTKSKGFDAKMNQTFRGIMEIP 976
Query: 866 GRNSSSDADSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEA 921
G +++S S E V+R+DKDE +++R NLV + + Q+ LRR+IV+ A
Sbjct: 977 GADAASSNSSNEPEEEVVYRLDKDEFSNGMAIVRANLVAMMERDLFQAKNLRRLIVEGSA 1036
Query: 922 PRFDSGSVFSQDPALS-YIWSE---KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTM 977
P F P LS Y S+ SLN DQ+RAI KV++AKDYAL+LGMPGTGKT+T+
Sbjct: 1037 PTFQ--------PTLSAYKMSDTDRASLNVDQKRAIDKVMSAKDYALVLGMPGTGKTTTI 1088
Query: 978 VHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAM 1036
H ++AL+ +G S+LLTSYT++AVDN+L+K++ +I +RIG VH E+Q+ L+A+
Sbjct: 1089 AHIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDNIRILRIGAAAKVHPEVQQFADLAAV 1148
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
N++EE++ + +VVA TCLGI + + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1149 PKNTIEELQGAYEDSQVVATTCLGIGHSVFSQRIFDYCIVDEASQITLPVCLGPIRMART 1208
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN L
Sbjct: 1209 FILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDSHPASVVNLEHQYRMCKDIMLLSNTL 1268
Query: 1157 IYGDRLSCGSDEIANAKIKVSDL-----------------------SSCSPWLKEALNPC 1193
IY +L CG+ E+A ++V ++ S WL++ ++P
Sbjct: 1269 IYSGQLKCGTQEVAARSLEVPNIGGLRHLHLDHFQPPGQRQLCLGTSQGRCWLRDLVDPS 1328
Query: 1194 RPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
VNTD L PA + + NP EA L A++ + + I + IG+IT Y SQ
Sbjct: 1329 AKTRLVNTDTLATPALDVAQGSRIVNPTEATLCAQLVEAFISCGIPARSIGVITFYRSQL 1388
Query: 1252 NLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
+L++ +L + +E+HT DK+QGRDK+ +++S VRS N N LL DW R+NVA T
Sbjct: 1389 SLLKQNLRRHLPDLEMHTADKFQGRDKEVVVLSCVRS--NSDNHVGDLLRDWRRVNVAFT 1446
Query: 1310 RAKKKLIMVGSCRTL-SKVPLLKLLINKVGEQSGILN 1345
RA+ KL++VGS TL LL + V EQ + N
Sbjct: 1447 RARTKLLVVGSKSTLRGGNELLGKYVKLVEEQGWVYN 1483
>gi|358367030|dbj|GAA83650.1| DNA replication helicase Dna2 [Aspergillus kawachii IFO 4308]
Length = 1659
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 363/1015 (35%), Positives = 555/1015 (54%), Gaps = 113/1015 (11%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P +VL + +E++ E++ V L E W +++IG+FD G C V N +I+HP
Sbjct: 566 PEQVLSVQDERTKEKKVVILRESWCECPCVKESYIHLIGDFDATGHCIVDDSRNMVILHP 625
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D LVS T VA S SC RR+VL +R+K S+ + + G + H++FQ + L
Sbjct: 626 DHLVSATVVADSISCQRRAVLQDRIKYTSDLGKAQVFGNIFHEVFQEAIKLNKWDTNSLR 685
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF-KDSQDLNTPTVDFGSDG 567
V K IE LY + + + ++ IP + W F + + D GS
Sbjct: 686 TLIEGVTVKRIEDLYLIRMTIPEAVEYIMSRIPGVQAWAERFLRVKPSAESLVEDRGSSK 745
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+ L I+++ ++EE W+P YGLKG +DA+++V ++ N +++PLE KTG N
Sbjct: 746 MS-LSINKLLEVEEHIWSPMYGLKGNVDATVQVACHDGESDKN-LVIPLELKTG---NRD 800
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
++ HRAQ LYTLL+S+RY GLLYYL++ + + R +L+ +I +RN
Sbjct: 801 TNQAHRAQTALYTLLLSDRYDVECTFGLLYYLETTKIFRIRGIRHELLQMIQQRNRIVGY 860
Query: 688 IIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTA 727
+ + + LPPM + A G+ E SGLG+ F + + HLT+
Sbjct: 861 MRQRT---HLPPMAKKSSFCNKCYSKTPCFIYHKLADDGDGETSGLGDDFVNAMDHLTSD 917
Query: 728 HCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRD 785
F R WD L+ E K M K E+W S C ++V+D S+ E + +
Sbjct: 918 DRDFFRKWDDLLTKEEKNMIRFKRELWTMLSSEREALGRCFGNVVIDPSSSYEDKDGPKI 977
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGL 845
NR+ Y FV++ P+ + S +S L G+ +++S E A+A+G
Sbjct: 978 NRYRYTFVKKQ---PHSSFSFTES-------------QLTLGEPIVVSDEKGHFALANGY 1021
Query: 846 ITEISRFHVSVSFSKPL---RLPGRN--------------------SSSDADSLLHEVWR 882
+ ++SR H++V+ + L R R S S A+S V+R
Sbjct: 1022 VVQVSRRHITVAVDRRLHNARTKARGFDAERNQSFKGIMEILEDGASPSPAESDEEPVYR 1081
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE +++R NLV + + Q+ QLRR+IV EAP F + A +Y S
Sbjct: 1082 LDKDEFSNGMAIVRTNLVSMMERDLFQARQLRRLIVKREAPAFKTT-------ASAYTLS 1134
Query: 942 EK---SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
E +LN DQR+AI KV+ A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT+
Sbjct: 1135 ESDKAALNVDQRQAIDKVMRAEDYALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYTH 1194
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K+K + +RIG VH ++Q+ L+A+ ++EE+K + +VVA T
Sbjct: 1195 TAVDNILLKIKDDNFRILRIGAPAKVHPDVQQFADLAAVPKTTLEELKASYEDSQVVATT 1254
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLG+++ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA+E
Sbjct: 1255 CLGVSHGIFSQRMFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLVQNKEAQE 1314
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY RL CG+ ++A + +
Sbjct: 1315 GGLDVSLFKLLSDSHPASVVNLEHQYRMCEDIMLLSNTLIYSGRLKCGTGDVAVRSLNIP 1374
Query: 1178 DL------------------------SSCSPWLKEALNPCRPVIFVNTDML--PAYEAKD 1211
++ S WLK+ + P VNTD L PA + +
Sbjct: 1375 NIGGLKQHHPSTFPQPHSQRQVCLGTSQGRCWLKDLVEPSAKTRLVNTDTLSIPALDVAN 1434
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTID 1269
+ NP EA + +++ + + + I + IG+I Y SQ +L++ +LS + +E+HT D
Sbjct: 1435 GSRIVNPTEATICSRLVEAFISSGIPARSIGVIALYRSQLSLLKQNLSRYLPDLEMHTAD 1494
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
K+QGRDK+ I++S VRS N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1495 KFQGRDKEVIILSCVRS--NADKNVGDLLRDWRRVNVAFTRARTKLLVVGSKSTL 1547
>gi|326484576|gb|EGE08586.1| DNA replication ATP-dependent helicase dna2 [Trichophyton equinum CBS
127.97]
Length = 1596
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 353/1014 (34%), Positives = 564/1014 (55%), Gaps = 109/1014 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVG-RENNFLIVHPD 450
KVL + ++ + RA+ L + WF + ++ V++IG FD G+C V ++ +I+ PD
Sbjct: 493 KVLVVREDKKRKSRAITLRDSWFESAVSKDTYVHLIGNFDRNGQCLVDDSSSHAIILDPD 552
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K + + + + G +LH+IFQ + + +L+
Sbjct: 553 HLISATVVADSFTCPRRAVLQDRVKATNDANKPQVYGHILHEIFQEAMKANTWNLPWLKN 612
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+L K IESL+ + ND L +P + +W L+ + +D +
Sbjct: 613 LINTILPKYIESLFDVNLTFNDAASYLESKMPALRDWAKLYVHPRPTAGSMMDDRNGATS 672
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E + ++ + +PLE KTGK QS
Sbjct: 673 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEEGSQ-KTLTVPLEVKTGKNNTNQS- 730
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 731 --HRAQTALYSLLLSDRYDINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYLR 788
Query: 690 KASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHC 729
+ +LPPMLR Y G +E SG+G +F HL+ H
Sbjct: 789 QH---MELPPMLRNSRLCSPCYAKTSCFLYHKLVDNGTEETSGVGKIFQETSGHLSAPHQ 845
Query: 730 SFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNR 787
+F + WD L+ LE KEM + E+W + C +++++ +++E+ + R NR
Sbjct: 846 AFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVIIENGSASENSEGPRINR 905
Query: 788 FVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLIT 847
F Y F++ S+ G + + + G+ +++S E A+A+G +
Sbjct: 906 FQYTFIKPK------------SVSGFSF----TESQINVGEPIVISDEQGHFALANGFVV 949
Query: 848 EISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--------------------------VW 881
+IS ++V+ + L RN + D++ ++ ++
Sbjct: 950 QISPRRMTVAVDRRLH-NARNKEAGFDAINNQAFQGIMDISSKNKSAMEINRDTESPMLY 1008
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+DKDE +++R NLV L + QS++LR +IV+ AP F GS S+ P
Sbjct: 1009 RLDKDEFSNGLAIVRNNLVSLMARDVFQSARLRELIVEGAAPVFKPGSPLSRLPESV--- 1065
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++A
Sbjct: 1066 -GPNLNMDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTA 1124
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+K++ +R+G VH E+Q+ ++A N++EE++ + KVVA TCL
Sbjct: 1125 VDNILLKIRDDKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVVATTCL 1184
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E G
Sbjct: 1185 GVNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAIEGG 1244
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD- 1178
+++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY + L CG+ IA + + +
Sbjct: 1245 LDLSLFKLLCDMHPSSVVNLEHQYRMCEEVMLLSNTLIYSNHLKCGTPAIATRSLSIPNI 1304
Query: 1179 --LSSCSP--------------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQT 1214
L P WL++ ++P FVNTD L A ++
Sbjct: 1305 DGLKRIHPTSFPSSSTQSLCLGSSHNRCWLRDLIDPRAKARFVNTDTLRPEALDSAKGSR 1364
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQ 1272
+ N VEA L A++ + + I +DIG++T Y SQ +L++ L S +E+HT D++Q
Sbjct: 1365 IINEVEATLCAQLVEAFISVGIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQ 1424
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
GRDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1425 GRDKEIIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1476
>gi|171682064|ref|XP_001905975.1| hypothetical protein [Podospora anserina S mat+]
gi|170940991|emb|CAP66641.1| unnamed protein product [Podospora anserina S mat+]
Length = 1480
Score = 593 bits (1530), Expect = e-166, Method: Compositional matrix adjust.
Identities = 365/1017 (35%), Positives = 549/1017 (53%), Gaps = 134/1017 (13%)
Query: 388 KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+S KVL + +E + VHL DW T P V++IG+F+ +C + +N +I+
Sbjct: 380 ESEEKVLWVEHEGTKTTYMVHLRGDWVDTQANPKAYVHIIGDFEPSRRCIIDNNHNIIIL 439
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKF 506
HPD L+S T +A SF+C RR+VL +R+K + + AL+ GT+LH++FQA LM TM +
Sbjct: 440 HPDQLISSTVIADSFTCMRRAVLQDRVKATSEATPALVYGTILHEVFQAALMANEWTMDY 499
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
L + LQK++E +Y V+ +D LV +P++ +W F + V G +
Sbjct: 500 LRDVIDKTLQKHMEDIYVIKVSMDDARNHLVSKMPELRSWAQAFVSAAPQANANVQ-GRN 558
Query: 567 GLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
G K + +S++ D+EE W+P YGLKG IDA+++V + N + +P E KTGK
Sbjct: 559 GEKINMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMREG-NVSQTLTVPFEVKTGK--- 614
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
++ H+AQ +LY LL+S+RY I G+LYY+++ QT + R +L +IM+RN A
Sbjct: 615 -NATANHQAQTVLYNLLLSDRYDIEIAYGILYYMETSQTLRIPAIRHELRHMIMQRNALA 673
Query: 686 NDIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLT 725
I + S QLPPM R A GGN + SGL F++ + HL+
Sbjct: 674 CYIRERSV--QLPPMKRSKNACERCYARTSCFIYHKLADGGNGDTSGLNEKFEAAVQHLS 731
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSY 783
H F W+ L+ E KE Q ++ E+W + C ++++++ + E +
Sbjct: 732 PRHQEFFLKWEDLLTKEEKESQKLRRELWTMVSTEREKVGRCFANVIIEEGSAFEDENQA 791
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
+ NRF Y F+++ SP + G S MD L+ G+ +++S E A+A
Sbjct: 792 KINRFTYTFIKE---SP----AAGFSF---------MDSQLQVGEPIVVSDEQGHFALAL 835
Query: 844 GLITEISRFHVSVSFSKPL-----RLPGRNS-SSDADSLLHEV----------------- 880
G +T + + +SV+ + L R PG + + + + EV
Sbjct: 836 GYVTAVRKQRISVAVDRRLHNARIRQPGFDEVDNQVFASIMEVAPEGAAPAQSQGKIKEP 895
Query: 881 ---WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ-LRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+DKDE + +R NLVQ+ + Q +R+++VDL P F S P
Sbjct: 896 PIRYRLDKDEFSNGMATVRNNLVQIMTNGPRGFQRIRQLVVDLIPPSFKSA------PTQ 949
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
+ + SLN DQ+ A+ KV++AKDYAL+LGMPGTGKT+T+ H ++AL+ +G ++LLTSY
Sbjct: 950 YSVPGKNSLNVDQKAAVEKVMSAKDYALVLGMPGTGKTTTIAHIIRALIGQGKTLLLTSY 1009
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T++AVDN+L+KLK I +R+G VH E++ L++ ++S +EI++ VVA
Sbjct: 1010 THTAVDNILLKLKDDKIPILRLGAPAKVHPEVRDFVTLASQPMSSFDEIRRAWHGTPVVA 1069
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TCLG+ +P+ ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPPLVQ+ EA
Sbjct: 1070 TTCLGVNHPVFNERVFDYCIVDEASQITLPICLGPIRMARTFVLVGDHNQLPPLVQNNEA 1129
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI- 1174
R G+++SLF+ LS+ HP ++ L+ QYRM + IM LSN LIY RL CG++ +A
Sbjct: 1130 RIGGLDVSLFKLLSDAHPSSVVNLEHQYRMSEDIMTLSNTLIYKGRLKCGTESLATRNFT 1189
Query: 1175 -------------------KVSDLSSCSP-------WLKEALNPCRPVIFVNTDMLP-AY 1207
K + C P WL + + P V F+NTD+LP +
Sbjct: 1190 FLISKHLKQRHHDAETFSQKPPAGTHCCPAPKPNSCWLHDLITPSTRVKFINTDLLPDSQ 1249
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHT 1267
E + NP EA +I ++ LV G+D VE+HT
Sbjct: 1250 EQAKGNRIVNPTEAKIITQLVDSLVLGSTGGRD----------------------VEMHT 1287
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
D++QGRDK IL+S VRS N LL DW RINVA TRAK KL++VGS +TL
Sbjct: 1288 ADRFQGRDKSVILLSLVRS--NDSGSIGELLKDWRRINVAFTRAKVKLLVVGSKKTL 1342
>gi|396462466|ref|XP_003835844.1| hypothetical protein LEMA_P051850.1 [Leptosphaeria maculans JN3]
gi|312212396|emb|CBX92479.1| hypothetical protein LEMA_P051850.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 369/1051 (35%), Positives = 562/1051 (53%), Gaps = 127/1051 (12%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P KVL + E++ +A+ L + WF T G V+VIGEF G+C + +N LI+HP
Sbjct: 603 PEKVLLVEEEKTKLFKAITLRQAWFDTPCTTGSFVHVIGEFSSTGQCCIDDHHNMLILHP 662
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SF C RR+VL +R+K + + + +L GTLLH++FQ L FL
Sbjct: 663 DHLISATVVADSFGCLRRAVLQDRIKATSTANAPMLYGTLLHELFQEALKANKWDSAFLL 722
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E +L E++ ++ + L +P+M W +F SQ + V +
Sbjct: 723 ERIEKILPSKFETILEINSTREEVQEHLSSKLPEMQAWADIFVRSQPRDDAVVRERNGRQ 782
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ ++++ D+EE W+P YGLKG IDA+++V + + E + +P E KTGK S
Sbjct: 783 SIMSVNKLLDVEEHVWSPMYGLKGNIDATVQVIMRDDQGE-RTLTVPFEVKTGK---NTS 838
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA--- 685
+ H AQ LY LL+S RY + G+LYYL+S T + R+D++ +I++RNE A
Sbjct: 839 NAAHVAQTALYNLLLSNRYDVDVAYGILYYLESSDTSRIPAIRNDIIHMIIKRNELACYV 898
Query: 686 NDIIKASTTQQLPPMLRAYGGNKEC--------------SGLGNM--------FDSHIYH 723
D I LPPML+ ++C G G + +D +
Sbjct: 899 RDRI------DLPPMLKEDFKCQKCYAQEPCFLYNKLVEDGDGEVLNKKAKERYDELVKP 952
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK-- 781
L + F++ WD L+ E +M + E+W C S +VL+ + H++
Sbjct: 953 LKPSDQDFMKKWDALLTKEESDMMKFRRELWTMLSEEREKLGRCFSKVVLEPGSGHEEMN 1012
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
+ NR+ Y F++Q P + ++ ++G + V++S E A+
Sbjct: 1013 GQKINRYHYTFIKQQA-KPGFSFTESQLIVG---------------EPVVVSDEQGHFAL 1056
Query: 842 ASGLITEISRFHVSVSFSKPL-----RLPGRNSSSDAD-SLLHEV--------------- 880
A+G +T + + ++V+ + L +LPG S ++ + + EV
Sbjct: 1057 ANGYVTNVKKRRITVAVDRRLHNSRTKLPGFESQTNQTFTGIMEVGKEGDMVAECDENEE 1116
Query: 881 ---WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+DKDE + R NL+Q+ S ++ LR +I+D AP F + + P
Sbjct: 1117 PVLYRLDKDEFSNGMAAARNNLIQIMDNSVYKAHDLRALIIDGRAPAFKPVTAEMEPPQ- 1175
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
S+ S+N DQ+ AI KV++AKDYAL+LGMPGTGKT+T+ H ++ L+ +G S+LLTSY
Sbjct: 1176 ---GSQMSMNTDQKAAIAKVMSAKDYALVLGMPGTGKTTTIAHIIRTLVAKGKSVLLTSY 1232
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T++AVDN+L+K++ I +R+G VH E+++ L+A SVEE+++ + VVA
Sbjct: 1233 THTAVDNILLKIRDDKIGTLRLGASAKVHPEVREFAILAAEPKGSVEELERSWMEPPVVA 1292
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TCL I +PL + + FD CI+DEA Q TLPV LGP+ A KF+LVGDHYQLPPLVQ+ EA
Sbjct: 1293 TTCLTINHPLFSRRVFDYCIVDEASQITLPVCLGPIRMAQKFILVGDHYQLPPLVQNKEA 1352
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI- 1174
E G++ISLF+ L E HP+A+ +L+ QYRM +M LSN IY RL CG+ +A+ K+
Sbjct: 1353 MEGGLDISLFKLLCEAHPEAVVSLEHQYRMSADVMLLSNTFIYSGRLKCGTPSVASRKLS 1412
Query: 1175 ------------KVSDLSSC---------SP--WLKEALNPCRPVIFVNTDMLPA-YEAK 1210
K + SC SP WL +++P PV+F+NTD++ +
Sbjct: 1413 LPKSQGLLAYHHKPNQSRSCPSRPCTGPESPDCWLSRSISPDAPVVFINTDLISTNLDVV 1472
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS----------- 1259
+ N E L+ ++T L+ + +IGII Y SQ L+R SL+
Sbjct: 1473 SGPRITNTFEVQLVTQLTLCLLSLGVSANEIGIIAFYRSQLALLRQSLASAHTQTQSSEL 1532
Query: 1260 -----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+ VE+HT DK+QGRDK+ +LVS VRS+E+ LL D RINVALTRA+ K
Sbjct: 1533 GISAGSAGVELHTADKFQGRDKEVVLVSCVRSNED--GVVGELLKDRRRINVALTRARSK 1590
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LI++GS +TLS LL +I ++ ILN
Sbjct: 1591 LILLGSEKTLSSNELLGNMIALCRAKNWILN 1621
>gi|346323715|gb|EGX93313.1| DNA replication helicase Dna2, putative [Cordyceps militaris CM01]
Length = 1570
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 364/1029 (35%), Positives = 555/1029 (53%), Gaps = 123/1029 (11%)
Query: 383 DPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGREN 442
D + P K+L ++ + S R VHL W+ T V+VIG+F G+C V
Sbjct: 468 DQYNVARPEKILLIMPDNSKLTRQVHLRGAWYDTPAHAKSYVHVIGKFSINGQCVVDDAQ 527
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEI 501
N LI+HPD LVS T VA SF C RR+VL +R+K SE S + GT+LH+IFQ L+
Sbjct: 528 NLLILHPDQLVSATVVADSFGCMRRAVLQDRVKATSEASAPLVYGTMLHEIFQDALLANR 587
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
+ FL + +K++E LY V + L + ++ W F Q N V
Sbjct: 588 WDLPFLARLIEKITEKHVEELYTIKVGLPSAREHLQSKMMELSYWAKSFVSPQPNNDAVV 647
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING-----MILPL 616
+ + + ++++ D+EE W+P YGLKG IDA++ V N ++G + +P
Sbjct: 648 EDRNGKKATMAVTKLLDVEEHVWSPMYGLKGNIDATVEV------NMMDGEQSRLLTVPF 701
Query: 617 EFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVG 676
E KTG+ N SS H AQ LYTLL+S+RY I G+LYY+++ +T + R +L
Sbjct: 702 EVKTGR--NASSS--HMAQTALYTLLLSDRYDIEIAYGVLYYMETSKTMRIPAVRHELRH 757
Query: 677 LIMRRNEFANDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNM 716
+IM+RN+ A I + S QLPPML R Y G+ E SG+
Sbjct: 758 MIMQRNQLACYIRERSV--QLPPMLKSKNMCGRCYAKPSCFIYHRLADDGDGESSGMDEQ 815
Query: 717 FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD-- 774
FD + HLT H F W+ L+ +E KE Q K E+W + + C + ++++
Sbjct: 816 FDELVKHLTPRHQEFFIKWENLLTIEEKESQKTKRELWTMTSNEREKKSRCFADVIIEEG 875
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
+++ + R NRF Y FV++ P P + ++ + G+ +++S
Sbjct: 876 SASVDSDTPRINRFHYTFVKRK-PGPGFSF---------------LESEISVGEPIVVSD 919
Query: 835 ESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNS-SSDADSLLHEV-------- 880
E A+A G +T + +SV+ + L R PG + + + + EV
Sbjct: 920 EEGHFALAIGYVTAQRKQRISVAVDRRLHNSRIRHPGFDEVDNQVFASIMEVAPEGASVE 979
Query: 881 ------------WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSG 927
+R+DKDE + +R N+VQ+ Q A+ ++R +IVDLEAPR
Sbjct: 980 QSQGRIKAAPIRYRLDKDEFSNGMATVRNNIVQIMNNQFAEPRRIRELIVDLEAPR---- 1035
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
F P + +++LN DQ++AI KV++A+DYAL+LGMPGTGKT+T+ H ++AL +
Sbjct: 1036 --FKHIPTQYTVSEQETLNVDQKKAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALTSQ 1093
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKK 1046
G S+LLTS+T++AVDN+L+KLKS + +R+G VH ++Q+ L+ + EEIK+
Sbjct: 1094 GKSVLLTSHTHTAVDNILLKLKSDKMKVLRLGAPAKVHPDVQEFAILAGQPKTTFEEIKE 1153
Query: 1047 RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
VVA TCLGI +P+ ++ FD CI+DEA Q TLP+ GP+ A FVLVGDH QL
Sbjct: 1154 AWHDTPVVATTCLGINHPVFQERAFDYCIVDEASQITLPICAGPIRMARTFVLVGDHNQL 1213
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
PP+V++ AR+ G+++SLF+ LS+ HP ++ L QYRMC+ IM LSN LIY +L CG+
Sbjct: 1214 PPVVKNETARQGGLDVSLFKLLSDSHPDSVVNLAHQYRMCEDIMTLSNTLIYDGKLVCGT 1273
Query: 1167 DEIANAKIKVSDLSSCSP--------------------------WLKEALNPCRPVIFVN 1200
+E+ K+ + ++ + S WL + L V FVN
Sbjct: 1274 EELRKKKLHIPNMKALSQRHHNASTVLLPGTPRSFCKGPAPSQCWLYDLLESEARVRFVN 1333
Query: 1201 TDML-PAYEAKDH-QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
TD + PA + H + + N E +++++ + + I ++G++T Y SQ +L++ L
Sbjct: 1334 TDTIRPAAREEAHGKRIVNSAEVRIVSQLVESFLTVGIPASEVGVMTHYRSQLSLLKDKL 1393
Query: 1259 -SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC-TSSLLGDWHRINVALTRAKKKLI 1316
VE+HT D++QGRDK+ I++S VRS++ C LL DW RINVA TRAK KL+
Sbjct: 1394 KGYPGVEMHTTDRFQGRDKEVIVLSLVRSND---ACHIGELLRDWRRINVAFTRAKTKLL 1450
Query: 1317 MVGSCRTLS 1325
++GS TLS
Sbjct: 1451 VIGSKSTLS 1459
>gi|320588535|gb|EFX01003.1| DNA replication helicase [Grosmannia clavigera kw1407]
Length = 1602
Score = 593 bits (1529), Expect = e-166, Method: Compositional matrix adjust.
Identities = 379/1042 (36%), Positives = 553/1042 (53%), Gaps = 142/1042 (13%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGK-CDVGRENNFLIVHPD 450
+VL + E+S V L DW T + V+VIGEFD Q + C V E+N LI+HPD
Sbjct: 461 QVLVVQGERSQAAMTVRLRGDWAETAASEKAFVHVIGEFDGQTRTCVVDNEHNMLILHPD 520
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEE 509
LVS T VA SF+C RR+VL +R+K + AL+ GT+LH+IFQ LM FL
Sbjct: 521 QLVSATVVADSFTCTRRAVLQDRVKATSEPTPALVYGTVLHEIFQDALMANRWDGAFLAA 580
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
++K++E LY V + L+ ++ W F + T ++ G +G +
Sbjct: 581 TVDRAIEKHLEKLYTIRVQAAAAREHLLTQTRELQGWADTFLATTP-KTSSIVQGRNGER 639
Query: 570 -KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING--------MILPLEFKT 620
++ I+++ D+EE W+P YGLKG IDA+++V +E + G + +P E KT
Sbjct: 640 VRMSINKLLDVEEHVWSPMYGLKGNIDATVQVVMEEGQQGQQGGQTTKTTTLTVPFELKT 699
Query: 621 GKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMR 680
G+ S H+AQ +LY LL+++RY + G+L+Y++S Q V R +L +IM+
Sbjct: 700 GR----NMSSSHQAQTVLYNLLLTDRYDIAVQYGVLFYMESSQMLRVPAIRHELRHMIMQ 755
Query: 681 RNEFANDIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSH 720
RNE A + + S +LPPM R A GG+ E SG+G FD
Sbjct: 756 RNELAGHVRERSV--RLPPMKRSANACGRCCAQAACFVYHRLADGGDGETSGMGAPFDEA 813
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDAS---- 776
+ HLT H F W+ L+ E +E Q ++ E+W + C +VL
Sbjct: 814 VRHLTDQHRDFFLRWEDLLTKEERESQRLRRELWTMSSAERERLGRCFGEVVLGGEGGEG 873
Query: 777 -------NEHQ--KSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
E Q S + NRF Y FV++ P+ G S MD L G
Sbjct: 874 GVGGKGGREQQAASSGKINRFHYSFVKEDPPA-------GFSF---------MDSQLVVG 917
Query: 828 DYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSSSD---------- 872
+ V++S E A+A G +T + R + V+ + L R PG + ++
Sbjct: 918 EPVVVSDEKGHFALAIGFVTAVRRQRIDVAVDRRLHNARIRQPGFDEKTNQVFAGIMEVG 977
Query: 873 ----ADSLLHEV------WRIDKDEIMTSFSVMRYNLVQLFL---QSAQSSQLRRMIVDL 919
A++ +V +R+DKDE + +R NLVQ+ + +RR++VDL
Sbjct: 978 GREKAEAKGEQVKERPTRYRLDKDEFSNGMATVRNNLVQIMAGPKAGDAAEAIRRLVVDL 1037
Query: 920 EAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
EAPRF + S+ LN DQR+AI KV+ A+DYAL+LGMPGTGKT+T+ H
Sbjct: 1038 EAPRFRAEVKTENRSETEDSGSDGQLNVDQRQAIAKVMRAQDYALVLGMPGTGKTTTIAH 1097
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQS------------IDFVRIGRHEVVHKE 1027
++AL+ +G S+LL SYT++AVDN+L+KLK S I +R+G VH E
Sbjct: 1098 IIRALVRQGKSVLLASYTHTAVDNILLKLKPGSSAEKVGKVDHSEISILRLGAPAKVHPE 1157
Query: 1028 IQKHCLSA---MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
++ + A S E I++ VVA TCLGI + L ++ FD CI+DEA Q TL
Sbjct: 1158 VRDFAVLAEAPATQTSFEAIRRAWHDSPVVATTCLGIGHALFHERTFDYCIVDEASQITL 1217
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
P+ LGP+ A FVLVGDH QLPPLVQ+ EAR G+++SLF+RLS+ HP ++++L QYR
Sbjct: 1218 PICLGPIRMARTFVLVGDHNQLPPLVQNDEARAGGLDVSLFKRLSDAHPASVASLAHQYR 1277
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-------------DLSSCSP------W 1185
MC+ +M LSN LIYG RL CG + + + + V D+ C W
Sbjct: 1278 MCEDVMTLSNTLIYGGRLRCGYEALRHRSLAVQLEGLGVCHGGGSRDMIGCRGRPEEPCW 1337
Query: 1186 LKEALNPCRPVIFVNTDMLPA--YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L++ L P V+FVNTD + EAK ++ + NP EA L+A++ L+ + DIG+
Sbjct: 1338 LRDLLQPACRVVFVNTDAIAGSREEAKGNRIV-NPCEAELVAQLVAGLLAVGVAASDIGV 1396
Query: 1244 ITPYNSQANLIRHSL------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SS 1296
+T Y SQ L+RH L S +E+HT D++QGRDK+ +++S VR++E C+
Sbjct: 1397 MTHYRSQLALLRHRLRGMGGGSGGGLEMHTADRFQGRDKEVVVLSLVRNNE---ACSIGE 1453
Query: 1297 LLGDWHRINVALTRAKKKLIMV 1318
LL DW RINVA TRAK KL++V
Sbjct: 1454 LLKDWRRINVAFTRAKTKLLVV 1475
>gi|326475655|gb|EGD99664.1| DNA replication helicase Dna2 [Trichophyton tonsurans CBS 112818]
Length = 1596
Score = 593 bits (1528), Expect = e-166, Method: Compositional matrix adjust.
Identities = 352/1014 (34%), Positives = 564/1014 (55%), Gaps = 109/1014 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVG-RENNFLIVHPD 450
KVL + ++ + RA+ L + WF + ++ +++IG FD G+C V ++ +I+ PD
Sbjct: 493 KVLVVREDKKRKSRAITLRDSWFESAVSKDTYIHLIGNFDRNGQCLVDDSSSHAIILDPD 552
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K + + + + G +LH+IFQ + + +L+
Sbjct: 553 HLISATVVADSFTCPRRAVLQDRVKATNDANKPQVYGHILHEIFQEAMKANTWNLPWLKN 612
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+L K IESL+ + ND L +P + +W L+ + +D +
Sbjct: 613 LINTILPKYIESLFDVNLTFNDAASYLESKMPALRDWAKLYVHPRPTAGSMMDDRNGATS 672
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E + ++ + +PLE KTGK QS
Sbjct: 673 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEEGSQ-KTLTVPLEVKTGKNNTNQS- 730
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 731 --HRAQTALYSLLLSDRYDINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYLR 788
Query: 690 KASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHC 729
+ +LPPMLR Y G +E SG+G +F HL+ H
Sbjct: 789 QH---MELPPMLRNSRLCSPCYAKTSCFLYHKLVDNGTEETSGVGKIFQETSGHLSAPHQ 845
Query: 730 SFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNR 787
+F + WD L+ LE KEM + E+W + C +++++ +++E+ + R NR
Sbjct: 846 AFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVIIENGSASENSEGPRINR 905
Query: 788 FVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLIT 847
F Y F++ S+ G + + + G+ +++S E A+A+G +
Sbjct: 906 FQYTFIKPK------------SVSGFSF----TESQINVGEPIVISDEQGHFALANGFVV 949
Query: 848 EISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--------------------------VW 881
+IS ++V+ + L RN + D++ ++ ++
Sbjct: 950 QISPRRMTVAVDRRLH-NARNKEAGFDAINNQAFQGIMDISSKNKSAMEINRDTESPMLY 1008
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+DKDE +++R NLV L + QS++LR +IV+ AP F GS S+ P
Sbjct: 1009 RLDKDEFSNGLAIVRNNLVSLMARDVFQSARLRELIVEGAAPVFKPGSPLSRLPESV--- 1065
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++A
Sbjct: 1066 -GPNLNMDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTA 1124
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+K++ +R+G VH E+Q+ ++A N++EE++ + KVVA TCL
Sbjct: 1125 VDNILLKIRDDKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVVATTCL 1184
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E G
Sbjct: 1185 GVNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAIEGG 1244
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD- 1178
+++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY + L CG+ IA + + +
Sbjct: 1245 LDLSLFKLLCDMHPSSVVNLEHQYRMCEEVMLLSNTLIYSNHLKCGTPAIATRSLSIPNI 1304
Query: 1179 --LSSCSP--------------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQT 1214
L P WL++ ++P FVNTD L A ++
Sbjct: 1305 DGLKRIHPTSFPSSSTQSLCLGSSHNRCWLRDLIDPRAKARFVNTDTLRPEALDSAKGSR 1364
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQ 1272
+ N VEA L A++ + + I +DIG++T Y SQ +L++ L S +E+HT D++Q
Sbjct: 1365 IINEVEATLCAQLVEAFISVGIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQ 1424
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
GRDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1425 GRDKEIIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1476
>gi|407926213|gb|EKG19182.1| DNA replication factor Dna2 [Macrophomina phaseolina MS6]
Length = 1462
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 364/1035 (35%), Positives = 565/1035 (54%), Gaps = 128/1035 (12%)
Query: 387 AKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLI 446
A P KV + +E++ + +A+ L E W+ T G V+VIG+F G+C + +NN +I
Sbjct: 326 AMQPEKVFLVEDERTKKLKAITLREAWYDTPCEKGSYVHVIGDFTSGGQCIIDNDNNMII 385
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMK 505
+HPD L+S T + SFSC R++VL +R+K S+ + SA++GT+LH++FQ L +
Sbjct: 386 LHPDYLISATTIGDSFSCMRKAVLQDRIKATSDANESAMVGTILHELFQEALKANCWDHE 445
Query: 506 FLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGS 565
+L + + ++ + E++ G+ + LV IP++ W +F ++ V +
Sbjct: 446 WLVDLIQRIIPRKFETILEIGLTFEHVVDRLVSKIPQIQGWARIFVKARPGPDAVVKDRN 505
Query: 566 DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
++ ++++ ++EE W+P YGLKG IDAS++V + + E + +P E KTG+ N
Sbjct: 506 GKTVQMSVNKLLEVEEHIWSPMYGLKGNIDASVQVLMHDESGE-RTLTVPFELKTGRAVN 564
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
+ H+AQ LYTLLMS+RY I G+L+YL+S + R ++ +I++RNE A
Sbjct: 565 ----ISHQAQTALYTLLMSDRYDVDILYGVLFYLESSDISRIRAIRHEIRQMIIQRNEIA 620
Query: 686 NDIIKASTTQQLPPML-------RAYG-------------GNKECSGL--GNMFDSHIYH 723
+ +LPPM+ R Y G+ E G+ F+ + +
Sbjct: 621 CYV---RERLKLPPMIADSHQCNRCYAQETCFLYHRLAEDGSGETLGMPAKQKFEELVRN 677
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQK 781
L H F + WD L+ E EM+ E+W C S++V+D + E
Sbjct: 678 LKVPHQDFFQKWDLLLTKEESEMKRFHRELWTMLSEEREKLGRCFSNVVVDPGSFKEVPD 737
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
+ NRF Y ++ P+ N S +S I G+ +++S E A+
Sbjct: 738 GQKINRFQYSVIKHSAPA---NFSFTESQITV-------------GEPIVISDEMGHFAL 781
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL----------------------HE 879
A+G + + + ++V+ + L R D D L HE
Sbjct: 782 ANGYVVSVRKSSITVAVDRRLH-NARIKQHDFDPLTRQSFVGLMDVTGGAVVSSKPAEHE 840
Query: 880 ----VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFD-SGSVFS-Q 932
++R+DKDE +++R NL+QL S +SS LR +IVD +AP F S S +S Q
Sbjct: 841 DEPILYRLDKDEFSNGMALVRNNLIQLMNDSDFRSSILRALIVDGKAPTFKPSSSGYSIQ 900
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
P+ ++N DQ A+ KV +A+DYAL+LGMPGTGKT+T+ H +++L+ +G S+L
Sbjct: 901 GPS-----QHLTMNSDQVAAVEKVFSAQDYALVLGMPGTGKTTTIAHIIRSLVAKGKSVL 955
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQV 1051
LTSYT++AVDN+L+K+++ I +R+G +H E+Q ++A +S+EE+++ +
Sbjct: 956 LTSYTHTAVDNILLKIRNDGIGILRLGAAAKIHPEVQDFATVAAHPASSLEELERTWKEP 1015
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
VVA TCL I +P+ + FD CI+DEA Q TLPV LGP+ A +F+LVGDHYQLPPLVQ
Sbjct: 1016 PVVATTCLTINHPIFRRRLFDYCIVDEASQITLPVCLGPIRMAKRFILVGDHYQLPPLVQ 1075
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
+ EA+E G+++SLFR LSE HP A+ L+ QYRMC IM LSN LIY RL CG+D +AN
Sbjct: 1076 NKEAQEGGLDVSLFRLLSEAHPDAVVNLEHQYRMCAEIMLLSNTLIYDGRLKCGNDAVAN 1135
Query: 1172 AKIKVSDL-----------------------------SSCSP------WLKEALNPCRPV 1196
+ + + S+C+ WL AL+P V
Sbjct: 1136 RSLSIPNFDALQRHHHLSTQPQRGHSGNPFSAPIDSASTCTSHMSSKCWLTHALSPSNKV 1195
Query: 1197 IFVNTDML-PAYEAK-DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
+F+NTD L PA E + N VE L ++ + L+ + +IGIIT Y SQ L+
Sbjct: 1196 LFLNTDNLAPASEETLAGSRILNQVECTLTTQLVESLITTGVPASEIGIITFYRSQLALL 1255
Query: 1255 RHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC-TSSLLGDWHRINVALTRA 1311
RH+L ++E+HT DK+QGRDK+ ++VS VR++E C LL DW R+NVA+TRA
Sbjct: 1256 RHALRHRTPALELHTADKFQGRDKEVVIVSCVRNNE---QCNVGELLKDWRRVNVAVTRA 1312
Query: 1312 KKKLIMVGSCRTLSK 1326
+ KL++VGS +TLS+
Sbjct: 1313 RSKLVLVGSKKTLSR 1327
>gi|400596952|gb|EJP64696.1| DNA replication factor Dna2 [Beauveria bassiana ARSEF 2860]
Length = 1569
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 365/1024 (35%), Positives = 555/1024 (54%), Gaps = 113/1024 (11%)
Query: 383 DPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGREN 442
D +A P K+L ++ + S R VHL W+ T V+VIG+F +G+C V
Sbjct: 467 DQYNAVRPEKILLIMADNSKITRQVHLRGAWYDTPAHTKSYVHVIGKFSLKGQCIVDDAQ 526
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEI 501
N LI+HPD LVS T VA SF C RR+VL +R+K SE S + GT+LH+IFQ L+
Sbjct: 527 NLLILHPDQLVSATVVADSFGCMRRAVLQDRVKATSEASAPLVYGTMLHEIFQDALLANR 586
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
+ FL + + +K+IE LY V + L + ++ W F Q N V
Sbjct: 587 WDLPFLAQLIDKISEKHIEELYTIKVGLPSAREHLQSKMMELSYWAKSFVSPQPNNDAVV 646
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
+ + + ++++ D+EE W+P YGLKG IDA++ VK+ + + + +P E KTG
Sbjct: 647 EDRNGKKATMAVTKLLDVEEHVWSPMYGLKGNIDATVEVKM-TDGEQSRTLTVPFEVKTG 705
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
+ N SS H AQ LYTLL+S+RY I G+LYY+++ +T + R +L +IM+R
Sbjct: 706 R--NASSS--HMAQTALYTLLLSDRYDIDIAYGVLYYMETSKTMRIPAVRHELRHMIMQR 761
Query: 682 NEFANDIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHI 721
N+ A I + S QLPPML+ A G+ + SG+ FD +
Sbjct: 762 NQLACYIRERSV--QLPPMLKSKHMCGRCYAKPACFIYHRLADNGDGDSSGMDEKFDELV 819
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
HLT H F W+ L+ +E KE Q K E+W + + C + ++++ +
Sbjct: 820 KHLTPRHQEFFVKWENLLTVEEKEGQKTKRELWTMTSNERQKKSRCFADVIIEEGSASVD 879
Query: 782 S--YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
S R NRF Y F+++ P P S +S IG G+ +++S E
Sbjct: 880 SDMPRINRFHYTFIKRK-PEPGF--SFLESQIGV-------------GEPIVVSDEEGHF 923
Query: 840 AVASGLITEISRFHVSVSFSKPL-----RLPGRN------------------SSSDADSL 876
A+A G +T + +SV+ + L R PG + S +
Sbjct: 924 ALAIGYVTAARKQRISVAVDRRLHNSRIRQPGFDELENQVFASIMEVAPEGASPEQSQGR 983
Query: 877 LHEV---WRIDKDEIMTSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQ 932
+ E +R+D+DE + +R N+VQ+ Q +S ++R +IVDLEAPRF
Sbjct: 984 IKEAPIRYRLDQDEFSNGMATVRNNIVQMMSNQFPESRRIRELIVDLEAPRF------KY 1037
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
P I + SLN DQ+RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL +G ++L
Sbjct: 1038 VPTQYTISEQDSLNVDQKRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALTSQGKTVL 1097
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQV 1051
LTS+T++AVDN+L+KLKS + +R+G VH ++Q+ L+ + + EEI++
Sbjct: 1098 LTSHTHTAVDNILLKLKSDKMKILRLGAPAKVHPDVQEFATLAGHPMKTFEEIEEAWHGT 1157
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
VVA TCLGI +P+ ++ FD CI+DEA Q TLP+ GP+ A FVLVGDH QLPP+V+
Sbjct: 1158 PVVATTCLGINHPVFQERAFDYCIVDEASQITLPICAGPIRMAKTFVLVGDHNQLPPVVK 1217
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
+ AR+ G+++SLF+ LS+ HP ++ L QYRMC+ IM LSN LIY +L CG++++
Sbjct: 1218 NETARQGGLDVSLFKLLSDSHPDSVVNLAHQYRMCEDIMTLSNTLIYDGKLVCGTEQLRK 1277
Query: 1172 AKIKVSDLSSCSP--------------------------WLKEALNPCRPVIFVNTDML- 1204
K+ V ++ + + WL + L V FVNTD +
Sbjct: 1278 KKLHVPNMRALTQRHHNASTVLLPGTPRSICKGPAPSQCWLYDLLESESRVRFVNTDTIQ 1337
Query: 1205 PAYEAKDH-QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSS 1262
P + H + + N E +++++ + + + +IG++T Y SQ +L++ L
Sbjct: 1338 PIVREEAHGKRIVNSAEIRIVSQLVESFLTVGVPASEIGVMTHYRSQLSLLKDKLKGYPG 1397
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE+HT D++QGRDK+ I++S VRS++ C LL DW RINVA TRAK KL+++GS
Sbjct: 1398 VEMHTTDRFQGRDKEVIVLSLVRSND---ACNIGDLLRDWRRINVAFTRAKTKLLVIGSK 1454
Query: 1322 RTLS 1325
TLS
Sbjct: 1455 STLS 1458
>gi|119500114|ref|XP_001266814.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
181]
gi|119414979|gb|EAW24917.1| DNA replication helicase Dna2, putative [Neosartorya fischeri NRRL
181]
Length = 1607
Score = 590 bits (1522), Expect = e-165, Method: Compositional matrix adjust.
Identities = 361/1059 (34%), Positives = 574/1059 (54%), Gaps = 136/1059 (12%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P +VL + +E++ ++AV L E WF + + G +++ G+FD G+C V +N +I+HP
Sbjct: 490 PEQVLLVQDERTKNKKAVILRESWFDSPCSKGAYIHLTGDFDAAGQCIVDDAHNMIILHP 549
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D LVS T VA S C RR+VL +R+K S+ S + G + H++FQ + + L
Sbjct: 550 DHLVSATVVADSIGCQRRAVLQDRIKNSSDISKPQVFGNIFHELFQEAMKINKWDLSSLR 609
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
+L +++E LY ++ + + ++ +P + W +F V+
Sbjct: 610 ALVEAILVRHVEDLYLIQMSIPEAVEYMMSRVPALKAWAEVFLRPTPSAESVVEDRHSSK 669
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
L I+++ ++EE W+P YGLKG IDA+++V N +++PLE KTG N +
Sbjct: 670 INLSINKLLEVEEHIWSPMYGLKGNIDATVQVACNDGEGNRN-LVVPLELKTG---NRDT 725
Query: 629 SMEHRAQVILYTLLMSERYLK--------------------HIDSGLLYYLQSDQTQGVM 668
+ HRAQ LYTLL+S+RY K + GLLYYL+ + +
Sbjct: 726 NQAHRAQTALYTLLLSDRYGKLSSRNYAPDFVSLIVRFQDVDVTFGLLYYLEISKIFRIR 785
Query: 669 VQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG--------------------GNK 708
R +L+ +I RN A + +LPPM++ G G+
Sbjct: 786 GVRHELLQMIQERNRLAGFV---RERHRLPPMVKKPGMCNRCYSKTPCLIYHKLADDGDG 842
Query: 709 ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
E SGLG+ F + +LT H F + WD L+ E + M K E+W S C
Sbjct: 843 ETSGLGDEFVKAMDYLTPQHRDFFKKWDDLLTKEEQSMMRFKRELWTLLSSEREALGRCF 902
Query: 769 SSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
++V+ ++ E ++S + NRF Y FV++H P P+ + ++ L
Sbjct: 903 GNVVIQPGSAYEDKESTKINRFRYTFVKKH-PLPSFSFTESQ---------------LTV 946
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR----------------------- 863
G+ +++S E A+A+G + ++S H+ V+ + L
Sbjct: 947 GEPIVVSDEKGHFALANGYVVQVSPKHIMVAVDRRLHNTRTKTKGFDANKNQSFRGITEV 1006
Query: 864 -----LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIV 917
P S+ + +L +R+DKDE +++R NL+ + + Q+++LR++IV
Sbjct: 1007 LEDSSFPSTTSNEPEEEIL---YRLDKDEFSNGMAIVRNNLICMMEKDLFQANRLRKLIV 1063
Query: 918 DLEAPRFD-SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
+ E P F S S F + ++ SLN DQ+RAI KV++A+DYAL+LGMPGTGKT+T
Sbjct: 1064 EGETPIFKPSPSAFPLSDS-----AKASLNVDQKRAIDKVMSARDYALVLGMPGTGKTTT 1118
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSA 1035
+ H ++AL+ +G S+LLTSYT++AVDN+L+K++ + +RIG VH E+Q+ L+A
Sbjct: 1119 IAHIIRALVAQGKSVLLTSYTHTAVDNILLKIRDDNFRILRIGATAKVHPEVQQFVDLAA 1178
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+ ++VEE+K ++ +VVA TCLG+ + + + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1179 VPKSTVEELKASYEESQVVATTCLGVNHNIFNRRIFDYCIVDEASQITLPVCLGPIRMAR 1238
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
F+LVGDHYQLPPLVQ+ EA+E G+++SLF+ LS+ HP+++ L+ QYRMC+ IM LSN
Sbjct: 1239 TFILVGDHYQLPPLVQNKEAQEGGLDVSLFKLLSDAHPESVVNLEHQYRMCEDIMVLSNN 1298
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSC----------SP--------------WLKEALN 1191
LIY RL CG+ +A+ + + ++ SP WL++ L+
Sbjct: 1299 LIYSGRLKCGTPAVASRSLDLPNIGGLKLHHINQLPQSPNQRQFCLGANQGRCWLRDVLD 1358
Query: 1192 PCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P F+NTD L PA + + + NP E+ + A++ + LV I ++IG+IT Y S
Sbjct: 1359 PSAKNRFINTDTLGIPARDVANGARIVNPTESSICAQLVESLVSCGIPARNIGVITFYRS 1418
Query: 1250 QANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q +L++ +L + +E+HT DK+QGRDK+ +L+S VRS N N LL DW RINVA
Sbjct: 1419 QLSLLKQNLRRYLPELEMHTADKFQGRDKEVVLLSCVRS--NTDNNVGDLLRDWRRINVA 1476
Query: 1308 LTRAKKKLIMVGSCRTLSKV-PLLKLLINKVGEQSGILN 1345
TRA+ KL+++GS TL LL+ I+ V E+ + +
Sbjct: 1477 FTRARTKLLVIGSKSTLRDGNDLLRKYISMVEERRWVYD 1515
>gi|425766173|gb|EKV04798.1| DNA replication helicase Dna2, putative [Penicillium digitatum Pd1]
gi|425774527|gb|EKV12830.1| DNA replication helicase Dna2, putative [Penicillium digitatum PHI26]
Length = 1637
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 367/1018 (36%), Positives = 552/1018 (54%), Gaps = 120/1018 (11%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P L + +E++ + + + L E WF T + ++++G+F+ G+C V N+ +I+HP
Sbjct: 539 PAYELLVEDEKTQDRKVIVLRESWFDTPCSTDSFIHLVGDFNSAGQCVVDNLNHMIILHP 598
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCSERSISAL-----LGTLLHQIFQAGLMKEIPTM 504
D L+S T VA S C RR+VL +R+K I+AL G H++FQ L M
Sbjct: 599 DHLISATVVADSMDCQRRAVLQDRVKV----IAALERPQAFGVFFHEVFQEALKANQWDM 654
Query: 505 KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ L+ V+ ++IE LY+ ++ + + L+ +P +L+W F + V+
Sbjct: 655 ESLKTLVETVMGRHIEELYSIQMSIPEAVEYLMSRMPAVLDWADAFLHLKPQAKSMVEDR 714
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
++ L I+++ ++EE W+P YGLKG IDA+++V + E N +++PLE KTG+
Sbjct: 715 NNTKLNLSINKLLEVEEHIWSPMYGLKGNIDATVQVTCHEDKMEKN-LVVPLELKTGRRD 773
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
QS HRAQ LYTLL+S+RY + GLLYYL+ +T + R +L+ +I RN
Sbjct: 774 TNQS---HRAQTALYTLLLSDRYDIDVTFGLLYYLELTKTLSIRGIRHELLQMIQVRNHL 830
Query: 685 ANDIIKASTTQQLPPML-------RAYG-------------GNKECSGLGNMFDSHIYHL 724
A I QQLPPML R Y GN E S LG FD+ + HL
Sbjct: 831 AGYI---RERQQLPPMLKKARQCIRCYAKTPCLIYHKLSEDGNGETSALGEDFDAAVGHL 887
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKS 782
F R WD L+ E + + E+W S C +V+D + E
Sbjct: 888 NNGDRDFFRKWDELLTKEEGNLVKFRRELWTLLSSEREALGRCFGDVVIDPHSVYEENTG 947
Query: 783 YRDNRFVYHFV-RQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
+ NR+ Y FV RQ +P + S +S I G+ +++S E A+
Sbjct: 948 TKINRYHYTFVKRQALP----DFSFAESQISV-------------GEPIVISDEKGHFAL 990
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE---------------------- 879
A+G + +S H+ V + L R+ ++ D++ ++
Sbjct: 991 ANGYVVHVSSSHIQVGVDRKLH-NARSKTAGFDAVTNQSFRGIMEVGKEEPAALETPDEQ 1049
Query: 880 -VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
V+RIDKDE +++R NL+ + + Q+ QLRR+IV +AP F + S +
Sbjct: 1050 LVYRIDKDEFSNGMAIVRNNLICMMDKDLFQARQLRRLIVKGQAPAFKTTS------SSH 1103
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
I +LN DQR+AI KV++AKDYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT
Sbjct: 1104 NISDPDNLNVDQRQAIDKVMSAKDYALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYT 1163
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAV 1056
++AVDN+L+K++ I +RIG VH ++Q+ L+A+ ++EE++ ++ +VVA
Sbjct: 1164 HTAVDNILLKIRDDKIHVLRIGATAKVHPDVQEFADLAAIPKATIEELRDSYEKPQVVAT 1223
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
TCLG+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ A+
Sbjct: 1224 TCLGVNHNIFNQRIFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLVQNKAAQ 1283
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA------ 1170
E G++ISLF+ LS+ P ++ L+ QYRMC+ IM LSN LIY RL CG+ ++A
Sbjct: 1284 EGGLDISLFKLLSDAQPDSVVNLEHQYRMCEDIMLLSNTLIYSGRLKCGTPQVAARSLDI 1343
Query: 1171 ---NA--KIKVSDL--------------SSCSP-WLKEALNPCRPVIFVNTDML--PAYE 1208
NA K V DL + SP WL++ L P VNTD + A E
Sbjct: 1344 PNINALGKFHVEDLAHSQSQSQREICPGTPTSPCWLRDLLEPFSKTRLVNTDPIGPAALE 1403
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIH 1266
+ N +E L +++ + I ++IG+IT Y SQ +L+R SL +E+H
Sbjct: 1404 IAQGNRVVNHMEVFLCSQLVDSFIACGIPARNIGVITFYRSQLSLLRQSLRRYTPDLEMH 1463
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
T DK+QGRDK+ I++S VRS N N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 1464 TTDKFQGRDKEVIILSCVRS--NAENNVGELLRDWRRVNVAFTRAQTKLLVVGSRSTL 1519
>gi|134055283|emb|CAK96173.1| unnamed protein product [Aspergillus niger]
Length = 1085
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 368/1012 (36%), Positives = 551/1012 (54%), Gaps = 119/1012 (11%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
+L + +E+S E++ V L E W +++IG+FD G C V N +I+HPD L
Sbjct: 1 MLSVQDERSKEKKVVILRESWCECPCVKESYIHLIGDFDATGHCIVDDSRNMVILHPDHL 60
Query: 453 VSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
VS T VA S SC RR+VL +R+K SE + + G + H++FQ + L
Sbjct: 61 VSATVVADSISCQRRAVLQDRIKYTSELGKAQVFGNIFHEVFQEAIKLNKWDTNSLRTLI 120
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
V K IE LY + + + ++ IP + W F L D G+ L L
Sbjct: 121 EGVTVKRIEDLYLIRMTIPEAVEYMMSRIPGVQAWAERF-----LRLKPSDRGNSKLS-L 174
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
I+++ ++EE W+P YGLKG +DA+++V ++ N +++PLE KTG N ++
Sbjct: 175 SINKLLEVEEHIWSPMYGLKGNVDATVQVACHDGESDKN-LVVPLELKTG---NRDTNQA 230
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
HRAQ LYTLL+S+RY GLLYYL++ + + R +L+ +I +RN + +
Sbjct: 231 HRAQTALYTLLLSDRYDVECTFGLLYYLETTKIFRIRGIRHELLQMIQQRNRIVGYMRQR 290
Query: 692 STTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAHCSF 731
+ LPPM + A G+ E SGLG+ F + + HLT F
Sbjct: 291 T---HLPPMAKKSSFCNKCYSKTPCFIYHKLADDGDGETSGLGDDFVNAMDHLTPDDRDF 347
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFV 789
R WD L+ E K M K E+W S C ++V+D +S E + + NR+
Sbjct: 348 FRKWDDLLTKEEKSMIRFKRELWTMLSSEREALGRCFGNVVIDPNSSYEEKDGPKINRYR 407
Query: 790 YHFVR-QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F++ Q PS + S L G+ +++S E A+A+G + +
Sbjct: 408 YTFIKKQAHPSFSFTESQ-----------------LTLGEPIVVSDEKGHFALANGYVVQ 450
Query: 849 ISRFHVSVSFSKPL-----RLPG----RNSS--------------SDADSLLHEVWRIDK 885
+SR H++V+ + L R G RN S S A+S V+R+DK
Sbjct: 451 VSRRHITVAVDRRLHNARTRARGFDATRNQSFKGIMEILEDGASPSPAESEEEPVYRLDK 510
Query: 886 DEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK- 943
DE +++R NLV + + Q+ QLRR+IV EAP F + A +Y SE
Sbjct: 511 DEFSNGMAIVRTNLVSMMERDLFQARQLRRLIVKREAPAFKT-------TASAYTLSESD 563
Query: 944 --SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+LN DQR+AI KV+ A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++AV
Sbjct: 564 KAALNVDQRQAIDKVMCAEDYALVLGMPGTGKTTTIAHIIRALVAQGKSVLLTSYTHTAV 623
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K+K + +RIG VH ++Q+ L+A+ +++EE+K + +VVA TCLG
Sbjct: 624 DNILLKIKDDNFRILRIGAPAKVHPDVQQFAELAAVPKSTMEELKASYEDSQVVATTCLG 683
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
+++ + T + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA+E G+
Sbjct: 684 VSHGIFTQRMFDYCIVDEASQITLPVCLGPIRMARTFILVGDHYQLPPLVQNKEAQEGGL 743
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY RL CG+ ++A + V ++
Sbjct: 744 DVSLFKLLSDSHPDSVVNLEHQYRMCEDIMLLSNTLIYSGRLKCGTADVAVRSLTVPNIG 803
Query: 1180 -----------------------SSCSPWLKEALNPCRPVIFVNTDML--PAYEAKDHQT 1214
S WLK+ + P VNTD L PA + +
Sbjct: 804 GLKQHHPSTFPQPRSQRQVCLGTSQGRCWLKDLVEPSAKTRLVNTDTLSIPALDVANGSR 863
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQ 1272
+ NP EA + +++ + + I + IG+I Y SQ +L++ +LS + +E+HT DK+Q
Sbjct: 864 IVNPTEATICSRLVEAFISCGIPARSIGVIALYRSQLSLLKQNLSRYLPELEMHTADKFQ 923
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
GRDK+ I++S VRS N LL DW R+NVA TRA+ KL++VGS TL
Sbjct: 924 GRDKEVIILSCVRS--NTDKNVGDLLRDWRRVNVAFTRARTKLLVVGSKSTL 973
>gi|347834929|emb|CCD49501.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1632
Score = 586 bits (1510), Expect = e-164, Method: Compositional matrix adjust.
Identities = 358/1015 (35%), Positives = 548/1015 (53%), Gaps = 125/1015 (12%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P K+L L E+S +R V+L W T + V++IG+FD QG C + + +I+HP
Sbjct: 528 PEKILYLQPERSKIKRMVYLRGTWIDTPVTTKAFVHIIGKFDAQGICVIDDNSGLIILHP 587
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S VA SF C RR+VL +R+K + E S + L GT+LH++FQA ++ FL
Sbjct: 588 DHLISALVVADSFGCTRRAVLQDRVKATGEASPAMLYGTILHEMFQAAMLVNRWDRMFLG 647
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E + Q+++E LY V + L + ++ W LF SQ V G+
Sbjct: 648 ELIDKLAQRHLEDLYVIKVEIPQAVEYLHSKMGELQAWAELFVSSQPKPGALVKAGNGDT 707
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
+ +S + D+EE W+P YGLKG IDA++++ + ++ + + P E KTGK P
Sbjct: 708 VAMCVSNLLDVEEHVWSPMYGLKGNIDATVQITMRDEKGQ-RTLTAPFEVKTGKNP---- 762
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
S+ +RAQ LY LL+S+RY I G+LYY+++ +T + R +L +IM+RNE A +
Sbjct: 763 SVANRAQTALYNLLISDRYDVEIAYGILYYMETSETIRIPAIRHELRHMIMQRNELACYV 822
Query: 689 IKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAH 728
+ + QLPPML+ A GN E SG+ FD + HLT H
Sbjct: 823 REKNA--QLPPMLKKENMCGRCYAKNTCFIYHKLADDGNGETSGMKEKFDEVVKHLTPKH 880
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
F WD L+ E K+ + E+W S C S+++++ ++ E Q + + N
Sbjct: 881 KEFFLKWDDLLTKEEKDSLKFRRELWTMLSSEREKLGRCFSNVIIEEGSAYEDQNNEKIN 940
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
R+ Y ++ P A+ G S MD + G+ +++S E A+A G +
Sbjct: 941 RYRYTMIK-----PKNTAAPGFSF---------MDSQIIVGEPIVISDEKGHFALAKGYV 986
Query: 847 TEISRFHVSVSFSKPL-----RLPGRN----------------SSSDADSL--LHE---V 880
T + + ++V+ + L R PG + S+ ADS+ + E +
Sbjct: 987 TNVRKNRITVAVDRRLHNARIRQPGFDETNNQVFASIMEVAAEGSTPADSIGKIREDPIL 1046
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+DKDE + +R NL+Q+ + S ++R ++VDL PRF S Y
Sbjct: 1047 YRLDKDEFSNGLATVRNNLIQIMTEGPFGSREIRSLVVDLNPPRFKPHST-------QYT 1099
Query: 940 WSEKS-LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
++S +N DQRRAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL
Sbjct: 1100 LKDRSCINVDQRRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRAL-------------- 1145
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVT 1057
+VDN+L+KL+ SI +R+G +H ++Q+ A++ ++EEI+ ++A +
Sbjct: 1146 -SVDNILLKLRDDSIPILRLGTKAKIHPDVQEFAKLAVDPKETMEEIRSVWHDTPIIATS 1204
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ ++ FD CI+DEA Q TLPV +GP+ A F+LVGDH QLPPLV+ EAR+
Sbjct: 1205 CLGINHPIFNERTFDYCIVDEASQITLPVCVGPIRLARTFILVGDHNQLPPLVKDEEARK 1264
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G++ISLF+ LS+ HPQ++ L+ QYRM +M LSN LIY RL CGS +AN KI +
Sbjct: 1265 GGLDISLFKYLSDAHPQSVVYLEHQYRMNADVMALSNTLIYNGRLKCGSTSVANRKIIIP 1324
Query: 1178 DLSSCSP-------------------------WLKEALNPCRPVIFVNTDMLP--AYEAK 1210
D+ + WL++ L+P V FV+TD L A E++
Sbjct: 1325 DMDALKANHHTPSSVLHSTQKSICLEPKKGRCWLRDLLDPDVTVAFVDTDSLGDMARESE 1384
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTID 1269
N VEA ++ ++ L+ ++ +IG++T Y SQ L++ SL + VE+HT D
Sbjct: 1385 KGNRTVNDVEARIVTQLVTSLIAVGVDPTEIGVMTHYRSQLALLKDSLRNAKGVEMHTAD 1444
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++QGRDK+ I++S VRS+E LL DW RINVA TRAK KL++VGS TL
Sbjct: 1445 RFQGRDKEVIVLSLVRSNEG--GSIGELLKDWRRINVAFTRAKTKLLVVGSRGTL 1497
>gi|322699514|gb|EFY91275.1| putative DNA helicase [Metarhizium acridum CQMa 102]
Length = 1535
Score = 585 bits (1509), Expect = e-164, Method: Compositional matrix adjust.
Identities = 352/1014 (34%), Positives = 545/1014 (53%), Gaps = 116/1014 (11%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
+L + + S R VHL WF T V+VIG F +G+C V N LI+HPD L
Sbjct: 450 ILIIQADNSKVTRTVHLRGAWFDTPANTNSYVHVIGSFSARGQCIVDDAQNLLILHPDQL 509
Query: 453 VSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
VS T VA SF C RR+VL +R+K SE S + GT+LH+IFQ LM + FL
Sbjct: 510 VSSTVVADSFGCMRRAVLQDRVKATSEASPPLVYGTMLHEIFQEALMANQWDLPFLSSII 569
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
+ + ++E LY V + L+ + ++ W F + + V+ + +
Sbjct: 570 DKITENHVEDLYTIKVGLPSAKEHLLSKMTELSCWAKAFVAPKPQDDAVVEDRNGKKANM 629
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKI-ESKRNEINGMILPLEFKTGKIPNGQSSM 630
I+++ D+EE W+P YGLKG +DA++ V + + KR + +P E KTGK N
Sbjct: 630 AITKLLDVEEHVWSPMYGLKGNVDATVEVAMSDGKRTRT--LTVPFEVKTGKHANSN--- 684
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
H AQ LYTLL+S+RY I G+LYY+++ +T + + +L +I++RN+ A I +
Sbjct: 685 -HMAQTALYTLLLSDRYDIDIAYGILYYMETSKTMRIPAIQHELRHMILQRNQLACYIRE 743
Query: 691 ASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAHCS 730
S QLPPML+ A G+ E SG+ FD + HLT H
Sbjct: 744 RSV--QLPPMLKSKHMCGKCYAKTSCFTYHRLADNGDGESSGMHEKFDELVRHLTPTHQD 801
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDNRF 788
F W+ L+ +E KE Q K E+W + + C S ++++ + + R NRF
Sbjct: 802 FFVKWENLLTMEEKESQKTKRELWTMTSTEREKKSRCFSDVIIEEGSASVDTLNPRINRF 861
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y F++++ PN + ++ L +G+ V++S E A+A G +T
Sbjct: 862 HYTFIKRNQ-QPNFSF---------------LESELTTGEPVVVSDEEGHFALAIGYVTS 905
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV--------------------------WR 882
+ + +SV+ + L R D + ++V +R
Sbjct: 906 VRKQRISVAVDRRLH-NARTRQLGFDEIDNQVFSSIMDVTQGKSPDQVQCEIKEPPVRYR 964
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQS-SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+D+DE + +R NLVQ+ S +Q+RR+IVDL PRF + P +
Sbjct: 965 LDQDEFSNGMATVRNNLVQMMANDVPSATQIRRLIVDLAPPRFKTV------PTQYTVTD 1018
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++LN DQRRAI KV++ +DY+L+LGMPGTGKT+T+ H ++AL+ +G ++LLTS+T++AV
Sbjct: 1019 GENLNVDQRRAIEKVMSTQDYSLVLGMPGTGKTTTIAHIIRALVSQGKTVLLTSHTHTAV 1078
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+KLK+ I +R+G VH E+Q L+ + +EIK+ +VA TCLG
Sbjct: 1079 DNILLKLKTDKIPVLRLGAPAKVHPEVQDFAHLAGQPRKTFDEIKEAWHGTPIVATTCLG 1138
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
I +P+ ++ FD CI+DEA Q TLP+ GP+ A FVLVGDH QLPP+V++ +ARE G+
Sbjct: 1139 INHPVFQERSFDYCIVDEASQITLPICAGPIRMARSFVLVGDHNQLPPVVRNEDAREGGL 1198
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
++SLF+ LS+ HP+A+ L+ QYRMC+ IM LSN LIY +L CG++ + ++ + +++
Sbjct: 1199 DVSLFKLLSDAHPEAVVNLEHQYRMCEDIMTLSNTLIYEGKLRCGTESLRRKRLHIPNMN 1258
Query: 1181 S--------------------CSP------WLKEALNPCRPVIFVNTDMLP--AYEAKDH 1212
+ C+ WL + L V FVNTD + A E
Sbjct: 1259 ALGQVHFNASSLAHPGTPRSFCTGPGPSRCWLYDLLESEARVRFVNTDTIRPLAREEAQG 1318
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKY 1271
+ + N E L++++ + L+ + ++G++T Y +Q L++ L + VE+HT D++
Sbjct: 1319 KRIVNSAETRLVSQLVESLLAVGVPASEVGVMTHYRAQLFLLKDRLKGYAGVEMHTTDRF 1378
Query: 1272 QGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
QGRDK+ +++S VRS+E C LL DW RINVA TRAK KL++VGS TL
Sbjct: 1379 QGRDKEVVVLSLVRSNEA---CNIGDLLKDWRRINVAFTRAKTKLLVVGSMNTL 1429
>gi|302502578|ref|XP_003013253.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
gi|291176816|gb|EFE32613.1| hypothetical protein ARB_00438 [Arthroderma benhamiae CBS 112371]
Length = 1597
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 350/1016 (34%), Positives = 563/1016 (55%), Gaps = 112/1016 (11%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVG-RENNFLIVHPD 450
KVL + ++ + RA+ L + WF + ++ +++IG FD G+C V N+ +I+ PD
Sbjct: 493 KVLVVREDKKKKTRAITLRDSWFESAVSKDTYIHLIGNFDRNGQCLVDDSSNHAIILDPD 552
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K + + + + G +LH+IFQ + + +L+
Sbjct: 553 HLISATVVADSFTCPRRAVLQDRVKATNDANKPQVYGHILHEIFQEAMKANTWNLPWLKN 612
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+L K IESL+ + ND L +P + +W + + +D +
Sbjct: 613 LINTILPKYIESLFDVNLTLNDAANYLESKMPALRDWAKSYVHPRPTAGSMMDDRNGATS 672
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E + + + +PLE KTGK QS
Sbjct: 673 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEEGGQ-KTLTVPLEVKTGKNNTNQS- 730
Query: 630 MEHRAQVILYTLLMSERYLK-HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 731 --HRAQTALYSLLLSDRYADINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYL 788
Query: 689 IKASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
+ +LPPML+ Y G +E SG+G +F HL H
Sbjct: 789 RQH---LELPPMLKNSRLCSPCYAKTSCFLYHKLVDDGTEETSGVGKIFQETSGHLRAPH 845
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
+F + WD L+ LE KEM + E+W + C +++++ +++E+ + R N
Sbjct: 846 QAFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVIIENGSASENSEGPRIN 905
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y F++ S+ G + + + G+ +++S E A+A+G +
Sbjct: 906 RFQYTFIKPK------------SVSGFSF----TESQINVGEPIVISDEQGHFALANGFV 949
Query: 847 TEISRFHVSVSFSKPL-----RLPGRNS----------------------SSDADSLLHE 879
+IS ++V+ + L + PG ++ + DA+S +
Sbjct: 950 VQISPRRITVAVDRRLHNARNKEPGFDAVNNQAFQGIMDISSKNKNAMDINCDAESPM-- 1007
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
++R+DKDE +++R NLV L + QS++LR +I++ AP F GS S+ P
Sbjct: 1008 LYRLDKDEFSNGLAIVRNNLVSLMARDVFQSARLRELIIEGAAPVFKPGSPLSRLPKSV- 1066
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT+
Sbjct: 1067 ---GPNLNMDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTH 1123
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K++ +R+G VH E+Q+ ++A N++EE++ + KVVA T
Sbjct: 1124 TAVDNILLKIRDDKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVVATT 1183
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLG+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E
Sbjct: 1184 CLGVNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAIE 1243
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY + L CG+ IA + +
Sbjct: 1244 GGLDLSLFKLLCDMHPSSVVNLEHQYRMCEEVMLLSNTLIYSNHLKCGTPTIATRSLSIP 1303
Query: 1178 DLSSCSP-----------------------WLKEALNPCRPVIFVNTDML--PAYEAKDH 1212
++ WL++ ++P FVNTD L A ++
Sbjct: 1304 NIDGLKRIHPTSFPSSSTQSLCLGSSHNRCWLRDLIDPRAKARFVNTDPLRPEALDSAKG 1363
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDK 1270
+ N VEA L A++ + + I +DIG++T Y SQ +L++ L S +E+HT D+
Sbjct: 1364 SRVINEVEATLCAQLVEAFISVGIAAEDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADR 1423
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QGRDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1424 FQGRDKEIIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1477
>gi|392869438|gb|EJB11783.1| DNA replication helicase Dna2 [Coccidioides immitis RS]
Length = 1659
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 547/1009 (54%), Gaps = 105/1009 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E++ + RA+ L E WF G +++IGEFD G+C V NN +I+HPD
Sbjct: 560 KVLFVEEERTKQNRAITLRESWFDMPCKKGFYLHLIGEFDTTGQCIVDDANNMIILHPDY 619
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE S + G +LH+IFQ + L
Sbjct: 620 LISATVVADSFTCQRRAVLQDRIKATSEASKPQVYGHILHEIFQEAMQANRWDFGCLRGL 679
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L K +ESLY V+ + L IP + W +F + ++ ++ + +
Sbjct: 680 IDETLPKYLESLYEIQVDVPEAKAYLQAKIPALKAWAEVFLRCRPIHESIIEDRNGTKAR 739
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ ++EE W+P YGLKG +DA+++V ++ K E + +PLE KTG+ ++
Sbjct: 740 LCINKLLEVEEHIWSPMYGLKGNVDATVQVVLQDK-TEQKTLTVPLELKTGRNTTNET-- 796
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+LYYL++ +T V +++ +I +RN A +
Sbjct: 797 -HRAQTALYTLLLSDRYDIDVTFGILYYLEASKTHRVRAIPAEIRQMIQQRNRLAGYV-- 853
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
LPPML+ Y G+ E G+G F + HL+ H +
Sbjct: 854 -RERLDLPPMLKNPRICNQCYAKTPCFVYHKLMDNGDGETGGIGKSFTELVGHLSPLHQT 912
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRF 788
F + WD L+ E KE + E+W S C S++V++ + E + NRF
Sbjct: 913 FFKKWDLLLTQEEKEAMKFRRELWTMLSSEREGVGRCFSNVVIEPGSAFEDTDGPKINRF 972
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y FV+ H P + ++ + +G+ +++S E A+A+G + +
Sbjct: 973 RYTFVK-HKPFSGFSFAESQ---------------ITAGEPIVVSDEKGHFALANGYVVQ 1016
Query: 849 ISRFHVSVSFSKPLR-------------------LPGRNSSSDADSLLHE-----VWRID 884
IS ++VS + L + N S ADS + E ++R+D
Sbjct: 1017 ISSRRLTVSVDRRLHNARTKVVGFDADRNQSFMGIMEVNDSKLADSRVAEEEEVVLYRVD 1076
Query: 885 KDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
KDE + +R NLV + S +S +LR +I++ P F S P LS +E
Sbjct: 1077 KDEFSNGMATVRNNLVCMMDNSQFRSKRLRDLIIEGVPPSFKP---LSSVPNLS-ASAEA 1132
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ ++A++ +G S+LL SYT++AVDN
Sbjct: 1133 NLNVDQKEAIEKVMSADDYALVLGMPGTGKTTTIAQLIRAIVAQGKSVLLASYTHTAVDN 1192
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
+L+K++ +R+G VH E+Q+ L+ + S+EEIK ++ +VVA TCLGI
Sbjct: 1193 ILLKIRYDGTKILRLGVPAKVHPEVQQFADLAGIPKKSIEEIKDSIENSQVVATTCLGIN 1252
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA E G+++
Sbjct: 1253 HFIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQNKEALEGGLDV 1312
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS- 1181
SLF+ L + HP A+ L+ QYRMC+ IM LSN LIY L CG+ E+A+ + + ++S
Sbjct: 1313 SLFKLLCDMHPGAVVNLEHQYRMCEDIMLLSNTLIYFGHLKCGTPEVASRSLNIPNMSGL 1372
Query: 1182 ----CSP------------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNN 1217
SP WL++ L+P VNTD L A E+ + + N
Sbjct: 1373 KQHHISPLSVPSSHTPCLGPTRGRCWLRDLLDPSAKARLVNTDFLNPRAGESANGSRIVN 1432
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRD 1275
VE L ++ + L+ I ++IG++T Y SQ L+R +L + +E+HT D++QGRD
Sbjct: 1433 VVEVALCNQLVEALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRD 1492
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
K+ I++S VRS N N LL DW R+NVA TRA+ K ++VGS TL
Sbjct: 1493 KEVIIMSCVRS--NAENNVGELLRDWRRVNVAFTRARTKFLIVGSKTTL 1539
>gi|327295602|ref|XP_003232496.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
gi|326465668|gb|EGD91121.1| DNA replication helicase Dna2 [Trichophyton rubrum CBS 118892]
Length = 1591
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 353/1013 (34%), Positives = 564/1013 (55%), Gaps = 107/1013 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF-LIVHPD 450
KVL + ++ + RA+ L + WF + ++ +++IG FD G+C V ++ +I+ PD
Sbjct: 488 KVLVVREDKKKKTRAITLRDSWFDSAVSKDTYIHLIGNFDRSGQCLVDDSSSHAIILDPD 547
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K + + + + G +LH+IFQ + + +L+
Sbjct: 548 HLISATVVADSFTCPRRAVLQDRVKATNDANKPQVYGHILHEIFQEAMKANTWNLPWLKN 607
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+L K IESL+ + ND L +P + +W + + +D +
Sbjct: 608 LINSILPKYIESLFDVNLTFNDAASYLESKMPALRDWAKSYVHPRPTAGSMMDDRNGATS 667
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E + ++ + +PLE KTGK QS
Sbjct: 668 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEEGSQ-KTLTVPLEVKTGKNNTNQS- 725
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 726 --HRAQTALYSLLLSDRYDINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYLR 783
Query: 690 KASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHC 729
+ +LPPML+ Y G +E SG+G +F HL H
Sbjct: 784 QH---LELPPMLKNSRLCSPCYAKTSCFLYHKLVDDGTEETSGVGKIFQETSGHLRAPHQ 840
Query: 730 SFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNR 787
+F + WD L+ LE KEM + E+W + C +++++ +++E+ + R NR
Sbjct: 841 AFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVIIENGSASENSEGPRINR 900
Query: 788 FVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLIT 847
F Y F++ P + S +S I G+ +++S E A+A+G +
Sbjct: 901 FQYTFIK---PKSVSSFSFTESQINV-------------GEPIVISDEQGHFALANGFVV 944
Query: 848 EISRFHVSVSFSKPL-----RLPGRNSSSDA--------------------DSLLHEVWR 882
+IS ++V+ + L + PG ++ ++ D+ ++R
Sbjct: 945 QISPRRITVAVDRRLHNARNKEPGFDAVNNQAFQGIMDISSKNKNAIDINRDTESPMLYR 1004
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+DKDE +++R NLV L + QS++LR +IV+ AP F GS S P
Sbjct: 1005 LDKDEFSNGLAIVRNNLVSLMARDVFQSARLRELIVEGAAPVFKPGSPLSLLPESV---- 1060
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++AV
Sbjct: 1061 GPNLNMDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAV 1120
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLG 1060
DN+L+K++ +R+G VH E+Q+ ++A N++EE++ + KVVA TCLG
Sbjct: 1121 DNILLKIRDDKYRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVVATTCLG 1180
Query: 1061 ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E G+
Sbjct: 1181 VNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAIEGGL 1240
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL- 1179
++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY + L CG+ IA + + ++
Sbjct: 1241 DLSLFKLLCDMHPSSVVNLEHQYRMCEEVMLLSNTLIYSNHLKCGTPAIATRSLSIPNID 1300
Query: 1180 ------------SSCSP----------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTL 1215
SS P WL++ ++P FVNTD L A ++ +
Sbjct: 1301 GLKRIHPTSFPSSSTQPPCLGPSHNRCWLRDLIDPRAKARFVNTDSLRPEALDSAKGSRI 1360
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQG 1273
N VEA L A++ + + I +DIG++T Y SQ +L++ L S +E+HT D++QG
Sbjct: 1361 INEVEATLCAQLVEAFISVGIAAQDIGVVTLYRSQLSLLKQKLRHHGSGLEMHTADRFQG 1420
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
RDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1421 RDKEIIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1471
>gi|320037197|gb|EFW19135.1| DNA replication helicase Dna2 [Coccidioides posadasii str. Silveira]
Length = 1660
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 360/1009 (35%), Positives = 546/1009 (54%), Gaps = 105/1009 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E++ + RA+ L E WF G +++IGEFD G+C V NN +I+HPD
Sbjct: 561 KVLFVEEERTKQNRAITLRESWFDMPCKKGFYLHLIGEFDTTGQCIVDDANNMIILHPDY 620
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE S + G +LH+IFQ + L
Sbjct: 621 LISATVVADSFTCQRRAVLQDRIKATSEASKPQVYGHILHEIFQEAMQANRWDFGCLRGL 680
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L K +ESLY V+ + L IP + W +F + ++ + +
Sbjct: 681 VDETLPKYLESLYEIQVDVPEAKAYLQAKIPALKAWAEVFLRCRPSLESIIEDRNGTKAR 740
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ ++EE W+P YGLKG +DA+++V ++ K E + +PLE KTG+ ++
Sbjct: 741 LCINKLLEVEEHIWSPMYGLKGNVDATVQVVLQDK-TEQKTLTVPLELKTGRYTTNET-- 797
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+LYYL++ +T V +++ +I +RN A +
Sbjct: 798 -HRAQTALYTLLLSDRYDIDVTFGILYYLEASKTHRVRAIPAEIRQMIQQRNRLAGYV-- 854
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
LPPML+ Y G+ SG+G F + HL+ H +
Sbjct: 855 -RERLDLPPMLKNPRICNQCYAKTPCFVYHKLMDNGDGGTSGIGKSFTELVGHLSPLHQT 913
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS--YRDNRF 788
F + WD L+ E E + E+W S C S++V++ + + + + NRF
Sbjct: 914 FFKKWDLLLTQEETEAMKFRRELWTMLSSEREGVGRCFSNVVIEPGSAFKDTDGPKINRF 973
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y FV+ H P + ++ + +G+ +++S E A+A+G + +
Sbjct: 974 RYTFVK-HKPFSGFSFAESQ---------------ITAGEPIVVSDEKGHFALANGYVVQ 1017
Query: 849 ISRFHVSVSFSKPLRLPGR-------------------NSSSDADSLLHE-----VWRID 884
IS ++VS + L R N S ADS + E ++R+D
Sbjct: 1018 ISPRRLTVSVDRRLHNAQRKVVGFDADRNQSFMGIMEVNDSKLADSRVAEEEEVVLYRVD 1077
Query: 885 KDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
KDE + +R NLV + S +S +LR +I++ P F S P LS ++E
Sbjct: 1078 KDEFSNGMATVRNNLVCMMDNSHFRSKRLRDLIIEGVPPSFKP---LSSVPNLS-AFAEA 1133
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ ++A++ +G S+LL SYT++AVDN
Sbjct: 1134 NLNVDQKEAIEKVMSADDYALVLGMPGTGKTTTIAQLIRAIVAQGKSVLLASYTHTAVDN 1193
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
+L+K++ +R+G VH E+Q+ L+ S+EEIK ++ +VVA TCLGI
Sbjct: 1194 ILLKIRYDGTKILRLGVPAKVHPEVQQFADLAGFPKKSIEEIKDSIENSQVVATTCLGIN 1253
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA E G+++
Sbjct: 1254 HFIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQNKEALEGGLDV 1313
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV------ 1176
SLF+ L + HP A+ L+ QYRMC+ IM LSN LIY L CG+ E+A+ + +
Sbjct: 1314 SLFKLLCDMHPGAVVNLEHQYRMCEDIMLLSNTLIYFGHLKCGTPEVASRSLNIPNMSGL 1373
Query: 1177 --------SDLSSCSP---------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNN 1217
S LSS +P WL++ L+P VNTD L A E+ + + N
Sbjct: 1374 KQHHISPLSVLSSHTPCLGPTRGRCWLRDLLDPSAKARLVNTDFLNPRAGESANGSRIVN 1433
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRD 1275
VE L ++ + L+ I ++IG++T Y SQ L+R +L + +E+HT D++QGRD
Sbjct: 1434 VVEVALCTQLVEALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRD 1493
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
K+ I++S VRS N N LL DW R+NVA TRA+ K ++VGS TL
Sbjct: 1494 KEVIIMSCVRS--NAENNVGELLRDWRRVNVAFTRARTKFLIVGSKTTL 1540
>gi|302663024|ref|XP_003023160.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
gi|291187142|gb|EFE42542.1| hypothetical protein TRV_02682 [Trichophyton verrucosum HKI 0517]
Length = 1596
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 350/1014 (34%), Positives = 564/1014 (55%), Gaps = 108/1014 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF-LIVHPD 450
KVL + ++ + RA+ L + WF + ++ +++IG FD G+C V ++ +I+ PD
Sbjct: 492 KVLVVREDKKKKTRAITLRDSWFESAVSKDTYIHLIGNFDRNGQCLVDDSSSHAIILDPD 551
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L+S T VA SF+CPRR+VL +R+K + + + + G +LH+IFQ + + +L+
Sbjct: 552 HLISATVVADSFTCPRRAVLQDRVKATNDANKPQVYGHILHEIFQEAMKANTWNLPWLKN 611
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+L K IESL+ + ND L +P + +W + + +D +
Sbjct: 612 LINTILPKYIESLFDVNLTFNDAANYLESKMPALRDWAKSYVHPRPTAGSMMDDRNGATS 671
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
K+ I+++ ++EE W+P YGLKG IDA++++ +E + ++ + +PLE KTGK QS
Sbjct: 672 KICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEEGSQ-KTLTVPLEVKTGKNNTNQS- 729
Query: 630 MEHRAQVILYTLLMSERYLK-HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
HRAQ LY+LL+S+RY ++ G+LYYL+ +T V ++ +I +RN A +
Sbjct: 730 --HRAQTALYSLLLSDRYADINVTFGILYYLEISKTLRVRAIPGEIRQMIQQRNLLAGYL 787
Query: 689 IKASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
+ +LPPML+ Y G +E SG+G +F HL H
Sbjct: 788 RQH---LELPPMLKNSRLCSPCYAKTSCFLYHKLVDDGTEETSGVGKIFQETSGHLRAPH 844
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDN 786
+F + WD L+ LE KEM + E+W + C +++++ +++E+ + R N
Sbjct: 845 QAFFKKWDDLLTLEEKEMSKFRRELWTMVSAEREGVGRCFGNVIIENGSASENLEGPRIN 904
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y F++ S+ G + + + G+ +++S E A+A+G +
Sbjct: 905 RFQYTFIKPK------------SVSGFSF----TESQINVGEPIVISDEQGHFALANGFV 948
Query: 847 TEISRFHVSVSFSKPL-----RLPGRNSSSD--------------------ADSLLHEVW 881
+IS ++V+ + L + PG ++ ++ D+ ++
Sbjct: 949 VQISPRRITVAVDRRLHNARNKEPGFDAVNNQAFEGIMDISSKNKNAMGINCDTESPMLY 1008
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+DKDE +++R NLV L + QS++LR +IV+ AP F GS S+ P
Sbjct: 1009 RLDKDEFSNGLAIVRNNLVSLMERDVFQSARLRELIVEGAAPVFKPGSPLSRLPESV--- 1065
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+LN DQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++A
Sbjct: 1066 -GPNLNMDQKMAIGKVLTAEDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTA 1124
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+K++ +R+G VH E+Q+ ++A N++EE++ + KVVA TCL
Sbjct: 1125 VDNILLKIRDDKFRILRLGTPSKVHPEVQQFAEMAATPKNTIEELEDSYENSKVVATTCL 1184
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G+ + + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E G
Sbjct: 1185 GVNHRIFNTRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAVEGG 1244
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD- 1178
+++SLF+ L + HP ++ L+ QYRMC+ +M LSN LIY + L CG+ IA + + +
Sbjct: 1245 LDLSLFKLLCDMHPSSVVNLEHQYRMCEEVMLLSNTLIYSNHLKCGTPTIATRSLSIPNI 1304
Query: 1179 --LSSCSP--------------------WLKEALNPCRPVIFVNTDML--PAYEAKDHQT 1214
L P WL++ ++P FVNTD L A ++
Sbjct: 1305 DGLKRVHPTSFPSSSTQSLCLGSSHNRCWLRDLIDPRAKARFVNTDSLRPEALDSAKGSR 1364
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQ 1272
+ N VEA L A++ + + I +DIG++T Y SQ +L++ L S++E+HT D++Q
Sbjct: 1365 IINEVEATLCAQLVEAFISVGIAAEDIGVVTLYRSQLSLLKQKLRHHGSALEMHTADRFQ 1424
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
GRDK+ I++S VRS+ + RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1425 GRDKEIIIMSCVRSNSD-RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1476
>gi|303324363|ref|XP_003072169.1| hypothetical protein CPC735_013420 [Coccidioides posadasii C735 delta
SOWgp]
gi|240111879|gb|EER30024.1| hypothetical protein CPC735_013420 [Coccidioides posadasii C735 delta
SOWgp]
Length = 1630
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 360/1009 (35%), Positives = 546/1009 (54%), Gaps = 105/1009 (10%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E++ + RA+ L E WF G +++IGEFD G+C V NN +I+HPD
Sbjct: 531 KVLFVEEERTKQNRAITLRESWFDMPCKKGFYLHLIGEFDTTGQCIVDDANNMIILHPDY 590
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE S + G +LH+IFQ + L
Sbjct: 591 LISATVVADSFTCQRRAVLQDRIKATSEASKPQVYGHILHEIFQEAMQANRWDFGCLRGL 650
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L K +ESLY V+ + L IP + W +F + ++ + +
Sbjct: 651 VDETLPKYLESLYEIQVDVPEAKAYLQAKIPALKAWAEVFLRCRPSLESIIEDRNGTKAR 710
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ ++EE W+P YGLKG +DA+++V ++ K E + +PLE KTG+ ++
Sbjct: 711 LCINKLLEVEEHIWSPMYGLKGNVDATVQVVLQDK-TEQKTLTVPLELKTGRNTTNET-- 767
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+LYYL++ +T V +++ +I +RN A +
Sbjct: 768 -HRAQTALYTLLLSDRYDIDVTFGILYYLEASKTHRVRAIPAEIRQMIQQRNRLAGYV-- 824
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
LPPML+ Y G+ SG+G F + HL+ H +
Sbjct: 825 -RERLDLPPMLKNPRICNQCYAKTPCFVYHKLMDNGDGGTSGIGKSFTELVGHLSPLHQT 883
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS--YRDNRF 788
F + WD L+ E E + E+W S C S++V++ + + + + NRF
Sbjct: 884 FFKKWDLLLTQEETEAMKFRRELWTMLSSEREGVGRCFSNVVIEPGSAFKDTDGPKINRF 943
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y FV+ H P + ++ + +G+ +++S E A+A+G + +
Sbjct: 944 RYTFVK-HKPFSGFSFAESQ---------------ITAGEPIVVSDEKGHFALANGYVVQ 987
Query: 849 ISRFHVSVSFSKPLRLPGR-------------------NSSSDADSLLHE-----VWRID 884
IS ++VS + L R N S ADS + E ++R+D
Sbjct: 988 ISPRRLTVSVDRRLHNAQRKVVGFDADRNQSFMGIMEVNDSKLADSRVAEEEEVVLYRVD 1047
Query: 885 KDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
KDE + +R NLV + S +S +LR +I++ P F S P LS ++E
Sbjct: 1048 KDEFSNGMATVRNNLVCMMDNSHFRSKRLRDLIIEGVPPSFKP---LSSVPNLS-AFAEA 1103
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ ++A++ +G S+LL SYT++AVDN
Sbjct: 1104 NLNVDQKEAIEKVMSADDYALVLGMPGTGKTTTIAQLIRAIVAQGKSVLLASYTHTAVDN 1163
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
+L+K++ +R+G VH E+Q+ L+ S+EEIK ++ +VVA TCLGI
Sbjct: 1164 ILLKIRYDGTKILRLGVPAKVHPEVQQFADLAGFPKKSIEEIKDSIENSQVVATTCLGIN 1223
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ + + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA E G+++
Sbjct: 1224 HFIFNSRTFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQNKEALEGGLDV 1283
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV------ 1176
SLF+ L + HP A+ L+ QYRMC+ IM LSN LIY L CG+ E+A+ + +
Sbjct: 1284 SLFKLLCDMHPGAVVNLEHQYRMCEDIMLLSNTLIYFGHLKCGTPEVASRSLNIPNMSGL 1343
Query: 1177 --------SDLSSCSP---------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNN 1217
S LSS +P WL++ L+P VNTD L A E+ + + N
Sbjct: 1344 KQHHISPLSVLSSHTPCLGPTRGRCWLRDLLDPSAKARLVNTDFLNPRAGESANGSRIVN 1403
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRD 1275
VE L ++ + L+ I ++IG++T Y SQ L+R +L + +E+HT D++QGRD
Sbjct: 1404 VVEVALCTQLVEALISVGIPAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRD 1463
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
K+ I++S VRS N N LL DW R+NVA TRA+ K ++VGS TL
Sbjct: 1464 KEVIIMSCVRS--NAENNVGELLRDWRRVNVAFTRARTKFLIVGSKTTL 1510
>gi|296807923|ref|XP_002844300.1| Dna2p [Arthroderma otae CBS 113480]
gi|238843783|gb|EEQ33445.1| Dna2p [Arthroderma otae CBS 113480]
Length = 1604
Score = 577 bits (1488), Expect = e-161, Method: Compositional matrix adjust.
Identities = 357/1057 (33%), Positives = 573/1057 (54%), Gaps = 131/1057 (12%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV++++E N +P KVL + ++ + RA+ L + WF + ++ +++IG
Sbjct: 460 YLVIDLAE-NTYTNPKGRTQWEKVLVVCEDKKKKTRAITLRDSWFDSAVSKDSYIHLIGT 518
Query: 430 FDDQGKCDVG-RENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGT 487
F+ G+C V N+ +I+ PD L+S T VA SF+CPRR+VL +R+K S+ + + G
Sbjct: 519 FNRNGQCLVDDSSNHAIIIDPDHLISATVVADSFTCPRRAVLQDRVKATSDANKPQVYGH 578
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI 547
+LH+IFQ + + +L++ +L K IESL+ V+ ND L +P + W
Sbjct: 579 ILHEIFQEAMKANNWGLSWLKKLIDTILPKYIESLFEVNVSINDAANYLETKMPALREWA 638
Query: 548 ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
L+ +D + + K+ I+++ ++EE W+P YGLKG IDA++++ +E +
Sbjct: 639 KLYVHPHPTAGSMMDDRNGAMSKICINKLLEVEEHVWSPMYGLKGNIDATVQIVLEEE-G 697
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLK------------------ 649
E + +PLE KTGK ++ HRAQ LY+LL+S+RY
Sbjct: 698 EQKTLTVPLEVKTGK---NNANHSHRAQTALYSLLLSDRYGISIYIPLSQLHLVVYTNTF 754
Query: 650 ---HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR---- 702
++ G+LYYL+ +T V +++ +I +RN A + + +LPPML+
Sbjct: 755 IDINVTFGILYYLELSKTLRVRAIPNEIRQMIQQRNLLAGYLRQRF---ELPPMLKNSRL 811
Query: 703 ---AYG-------------GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEM 746
Y G +E SG+G +F HLT H F + WD L+ LE KEM
Sbjct: 812 CSPCYAKSTCFLYHKLVDDGTEETSGVGKLFQETSGHLTAPHQGFFKKWDDLLTLEEKEM 871
Query: 747 QVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNA 804
+ E+W + C +++++ ++ E+ + + NRF Y FV+
Sbjct: 872 SKFRRELWTMVSAEREGVGRCFGNVIIENGSAIENSEGQKINRFQYTFVKPR-------- 923
Query: 805 SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRL 864
S+ G + + + G+ +++S E A+A+G + +IS ++V+ + L
Sbjct: 924 ----SVSGFSF----TESQINVGEPIVVSDEQGHFALANGYVVQISPRRITVAVDRRLH- 974
Query: 865 PGRNSSSDADSLLHE--------------------------VWRIDKDEIMTSFSVMRYN 898
RN + D++ ++ ++R+DKDE +++R N
Sbjct: 975 NARNKEAGFDAVSNQTFQGIMDISSGNRNAMNMDHRTENPMLYRLDKDEFSNGLAIVRNN 1034
Query: 899 LVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
LV L + QS++LR +IV+ AP F GS S+ P +LN DQ+ AI KVL
Sbjct: 1035 LVSLMARDVFQSARLRELIVEGAAPVFKPGSPISRLPEAV----GPNLNMDQKMAIGKVL 1090
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
+A DYAL+LGMPGTGKT+T+ ++AL+ +G S+LLTSYT++AVDN+L+K++ +R
Sbjct: 1091 SANDYALVLGMPGTGKTTTIAQIIRALVSQGKSVLLTSYTHTAVDNILLKIRDDKFRILR 1150
Query: 1018 IGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
+G +H E+Q+ L+A N++EE++ + KVVA TCLG+ + + + FD CI+
Sbjct: 1151 LGTPSKIHPEVQQFAELAATPKNTIEELEDVYENSKVVATTCLGVNHRIFNTRTFDYCIV 1210
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQS +A E G++ SLF+ L + HP ++
Sbjct: 1211 DEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQSKQAIEGGLDHSLFKLLCDMHPSSV 1270
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL----------------- 1179
L+ QYRMC+ IM LSN LIY + L CG+ IA + + ++
Sbjct: 1271 VNLEHQYRMCEEIMLLSNTLIYSNHLKCGTPAIATRSLSIPNINGLKRIHPTSFPSSTAK 1330
Query: 1180 SSC------SPWLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQEL 1231
S C WL+E ++P F+NTD L A ++ + N VEA L A++ +
Sbjct: 1331 SRCLGSSHGRCWLRELVDPRTKTRFINTDSLRPEALDSAKGSRIINEVEATLCAQLVEAF 1390
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
+ I +DIG++T Y SQ +L++ L ++E+HT D++QGRDK+ I++S VRS+ +
Sbjct: 1391 IAVGIAAQDIGVVTLYRSQLSLLKQKLRHHGPNLEMHTADRFQGRDKEVIIMSCVRSNSD 1450
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
RN LL DW R+NVA TRA+ K+++VGS TLS+
Sbjct: 1451 -RNV-GDLLRDWRRVNVAFTRARTKMLIVGSKATLSE 1485
>gi|378729525|gb|EHY55984.1| DNA replication ATP-dependent helicase Dna2 [Exophiala dermatitidis
NIH/UT8656]
Length = 1190
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 354/1072 (33%), Positives = 577/1072 (53%), Gaps = 131/1072 (12%)
Query: 371 LVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEF 430
++++V E P K P K+L + +E++G V L E W+ T G +++IG+F
Sbjct: 1 MIVDVIESEFEYKP-GRKRPEKMLSVKDEKTGMLYIVLLRESWYDTRCTKGSYIHIIGKF 59
Query: 431 DDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSIS-ALLGTLL 489
D +G+C + NN +I+HPD L+S T V +F C RR+VL +R+K + + + G +L
Sbjct: 60 DRRGQCIINDANNMIILHPDHLISSTVVGDAFMCMRRAVLQDRIKTTSVATQPQVYGYIL 119
Query: 490 HQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIIL 549
H++F L + ++ +L IE LY GV D + ++ P+++ W +
Sbjct: 120 HEVFGQALRLNKWDTQTFKDIIDKILPSYIEPLYEIGVQVQDAKEYVLGKAPELMAWASV 179
Query: 550 FKDSQDLNTPTVDFGSDGL-KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
F +L+ V +GL I+++ +IEE W+P YGLKG IDA+++ +++ +
Sbjct: 180 FV-GDELSPDAVIRDRNGLLVPTTINKLLEIEEHIWSPMYGLKGNIDATVQAQMKLPHEQ 238
Query: 609 -INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
+++P E KTGK N + +HR Q LYTLL+S+RY ++ G+LYY+++ +T V
Sbjct: 239 SARTLLVPFELKTGKRDNVE---QHRVQTALYTLLLSDRYDINVTCGVLYYMETSKTFRV 295
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGN 707
R+++ +I+ RNE A + LPPM + + G+
Sbjct: 296 EGVRNEIRHMIIERNELACYV---HDKLALPPMKKKEHLCKSCYIKASCFIYHKLSENGD 352
Query: 708 KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGC 767
E SGLG F+ + HL+ H +F + WD L+ E ++ + E+W S C
Sbjct: 353 GETSGLGEKFNEVVDHLSPEHQAFFKKWDDLLTQEERDTMKFRRELWTMLSSEREAVGRC 412
Query: 768 LSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
S +++ ++ E+ + + NR+ Y FV+ H P P + ++ +
Sbjct: 413 FSEVIIQPGSARENPSTSKINRYEYTFVK-HQPRPGFSFAESQ---------------IT 456
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADS--------LL 877
+G+ +++S E A+G +T + ++ V+ + L+ R +D DS ++
Sbjct: 457 TGEPIVISDEKGHFNFAAGFVTNVRPTYIVVAVDRKLQ-RARRKLADFDSSNRQIFSGVI 515
Query: 878 HE---------------VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEA 921
E ++RIDKDE + R N++++ + ++ +LR++I++ +
Sbjct: 516 EEHDRTRSASGVDEGPILYRIDKDEFANGMATARNNVIRMMEKDLWRARELRQLIIENKP 575
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
P F V S +LS S++SLN DQ++AI KV++A+DYAL+LGMPGTGKT+T+ H +
Sbjct: 576 PDF---KVTSTGYSLSGPASQQSLNIDQQKAIEKVMSARDYALVLGMPGTGKTTTIAHII 632
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINS 1040
+AL+ +G S+LL SYT++AVDN+L+K+K I +RIG VH +IQ +S + +
Sbjct: 633 RALVSQGKSVLLASYTHTAVDNILLKIKEDHIPILRIGAVNKVHPDIQSFADVSGVPKRT 692
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
+EE+ KVVA TCLG+ + + + FD CI+DEA Q TLPV LGP+ A FVLV
Sbjct: 693 IEELHASWHGSKVVATTCLGVNHGIFNARTFDYCIVDEASQITLPVCLGPIRMARTFVLV 752
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDHYQLPPLVQ+ +A+E G+++SLF+ LS+ P ++ L+ QYRM + IM LS L+Y
Sbjct: 753 GDHYQLPPLVQNKQAQEGGLDVSLFKLLSDAQPDSVVNLEHQYRMAEDIMLLSKELVYSG 812
Query: 1161 RLSCGSDEIANAKIKVSDL---------------------------------SSCSPWLK 1187
R+ CG++ +AN + + DL S S WL+
Sbjct: 813 RIKCGNEAVANRMLHIPDLEGGLAGHHFMASSLPNSRPGASSTGTQVQTICASKSSCWLR 872
Query: 1188 EALNPCRPVIFVNTDM-------LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
A++P +F+NTD L A+E N VE+ L A++ L+ + + +
Sbjct: 873 RAISPTSRCLFLNTDTMSTDNNALAAFETSAGARTTNTVESYLAAQLVATLIHSGVPPRS 932
Query: 1241 IGIITPYNSQ--------ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
IG+IT Y SQ +L+R + + VE+HT DKYQGRDK+ +++S VRS+ N
Sbjct: 933 IGVITFYRSQLALLKSDVKSLVRSAAVAADVEMHTADKYQGRDKEVVILSCVRSNANKH- 991
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTL--SKVPLLKLLINKVGEQSG 1342
LL DW R+NVA+TRA+ KL+++GS TL S VP+L+ I ++ +Q G
Sbjct: 992 -VGDLLKDWRRVNVAVTRARSKLLILGSKSTLQGSGVPILE-GITRIMDQKG 1041
>gi|67526391|ref|XP_661257.1| hypothetical protein AN3653.2 [Aspergillus nidulans FGSC A4]
gi|40740671|gb|EAA59861.1| hypothetical protein AN3653.2 [Aspergillus nidulans FGSC A4]
gi|259481813|tpe|CBF75685.1| TPA: essential tripartite DNA replication factor with single-stranded
DNA-dependent ATPase (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 1048
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 344/965 (35%), Positives = 527/965 (54%), Gaps = 106/965 (10%)
Query: 434 GKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQI 492
G C V N +I+HPD L+S T +A S SC RR+VL ER K S+ + G + H++
Sbjct: 3 GHCIVSDAQNMIIIHPDHLISATVIADSISCQRRAVLQERTKRTSDLGKPQVFGNIFHEL 62
Query: 493 FQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD 552
FQ + FL + +++E LY ++ N+ ++ IP + W LF
Sbjct: 63 FQEAMKWNRWDTAFLRTLIEDIAVRHVEELYLIHMSINEAVDHVMSRIPGIQRWAELFLR 122
Query: 553 SQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ V+ + KL I+++ ++EE W+P YGLKG IDA+++V + N +
Sbjct: 123 RKPGPQSFVEDRNSSKLKLSINKLLEVEEHVWSPMYGLKGNIDATVQVACNEGEGDKN-L 181
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTG N +++ HRAQ LYTLL+S+RY + GLLYYL++ + + R
Sbjct: 182 VVPLELKTG---NKETNQAHRAQTALYTLLLSDRYDVEVTFGLLYYLETSKIMRIRGIRH 238
Query: 673 DLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AYGGNKECSG 712
+L+ +I RN A + + + LPPMLR A GN E SG
Sbjct: 239 ELLHMIQERNRVAGYVRERT---YLPPMLRKPSMCNRCYSKTACFIYHKLADDGNGETSG 295
Query: 713 LGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIV 772
LG FD + HL +H F R WD L+ E M K E+W C +IV
Sbjct: 296 LGEEFDKAMEHLNPSHRDFFRKWDDLLTKEETSMMRFKRELWTLLSHEREALGRCFGNIV 355
Query: 773 LDASN--EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
++ E + + NR+ Y FV++ SP + ++ +G I
Sbjct: 356 IEPGTACEDKDGTKINRYRYTFVKKQQ-SPTFSFAESQITVGEPI--------------- 399
Query: 831 ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE----------- 879
++S E A+A+G + +IS V+V+ + L R +S DS+L++
Sbjct: 400 VISDEKGHFALANGYVVQISPKRVTVAVDRRLH-NSRTKASGFDSILNQSFRGIMEIEGD 458
Query: 880 ----------VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGS 928
++R+DKDE +++R NL+ + + Q+ QLR++IV+ + P F
Sbjct: 459 TPPSESAEETLYRLDKDEFSNGMAIVRSNLIAMMEKDLFQAGQLRKLIVEGKPPAFKPNV 518
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
P LS + LN DQ++AI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G
Sbjct: 519 -----PELSGL-GMAGLNIDQKQAIKKVMSAQDYALVLGMPGTGKTTTIAHILRALVAQG 572
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKR 1047
S+LLTSYT++AVDN+L+K++ ++ +RIG VH E+ + L+A ++ E+K
Sbjct: 573 KSVLLTSYTHTAVDNILLKVRDDNMRILRIGTVAKVHPEVHQFAELTATPKKTIAELKAT 632
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+ +VVA TCLG+ + + T + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLP
Sbjct: 633 YEDSQVVATTCLGVGHNIFTQRVFDYCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLP 692
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
PLVQ+ EA+ G+++SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY RL CG+
Sbjct: 693 PLVQNKEAQAGGLDVSLFKLLSDAHPSSVVNLEHQYRMCEDIMLLSNTLIYSGRLKCGTA 752
Query: 1168 EIANAKIKV-----------SDLS-SCSP------------WLKEALNPCRPVIFVNTDM 1203
E+A +++ SD S +C+ WL++ ++P V+TD
Sbjct: 753 EVAARSVEIPNIGGLKQHHLSDFSQTCNSRQLCLGTSQSRCWLRDLVDPLAKTYLVDTDT 812
Query: 1204 L--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-- 1259
L PA E + + NP+EA L ++ + + I + IG+IT Y SQ +L++ +L
Sbjct: 813 LGTPAGEVANGSRIVNPIEATLCTQLVEAFISCGIPARSIGVITFYRSQLSLLKQNLRHH 872
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+ ++E+HT DK+QGRDK+ I++S VRS N N LL DW R+NVA TRA+ KL+++G
Sbjct: 873 LPALEMHTADKFQGRDKEVIILSCVRS--NQENYVGDLLSDWRRVNVAFTRARTKLLVLG 930
Query: 1320 SCRTL 1324
S TL
Sbjct: 931 SKNTL 935
>gi|406700631|gb|EKD03796.1| DNA replication helicase dna2 [Trichosporon asahii var. asahii CBS
8904]
Length = 1351
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 367/1037 (35%), Positives = 548/1037 (52%), Gaps = 130/1037 (12%)
Query: 396 LLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKC--DVGRENNFLIVHPDVL 452
++N GE+R + L + W H + GD VN+I + + G ++ ++ +LI HPDVL
Sbjct: 293 VVNTAGGEQRVLQLKDQWSHLNVREGDIVNIISPQLKEDGPIVLNLKAKSTYLIHHPDVL 352
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEE-- 509
V+ T +A S CPRR +L ++ E A+ G +LH + Q+ L ++ F ++
Sbjct: 353 VTMTAMAGSQPCPRRPLLQSLMRLPEPPSKAMTYGNILHALLQSSLTQQNFDPDFTKQSI 412
Query: 510 YARLVLQKNIESLYACGVNENDIHKTL----VEAIPKM-LNWIILFKDSQDLNTPTVDFG 564
A L + ++ G+++ DI L V+A W+ D D + P +
Sbjct: 413 AAELGDEGRRLEIWGSGLSDKDIEDDLGPMAVDAFSSFGRKWV--GPDVSD-DGPLITSR 469
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK-RNEINGMILPLEFKTGKI 623
+ I+ + DIEE W+PK+GLKG IDAS+++++ + +EI +I PLE KTG+
Sbjct: 470 EEVCGAATITGLHDIEEDIWSPKWGLKGKIDASVQIRLRREGSSEIQDLIAPLEIKTGRS 529
Query: 624 PNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSD----------QTQGVMVQRSD 673
+G + HRAQ +LYTLLM +RY I SGLLYY Q + + + +++ R++
Sbjct: 530 ISG---LSHRAQTLLYTLLMEDRYGLPIPSGLLYYSQLNSVVLIDAKDVEVRSLIMARNE 586
Query: 674 LVGLIMRRNEFANDIIKASTTQQLPPML--RAYGGNKEC--------------------- 710
L ++R + A+ ++ + +EC
Sbjct: 587 LAEWMVRERQSPKAEGDAALAAEIEDVFLPEPIDNPRECMKCFASDACLLYRKVSRRSAL 646
Query: 711 ------SG---------LGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWC 755
SG L F ++ HLT H F RHW+RL+ LE ++ ++ ++W
Sbjct: 647 LADSVQSGNLPPPKDNDLAEKFVENVGHLTPTHVEFFRHWERLVTLEEQDTVRLRAQLWT 706
Query: 756 SRGSGGNHFTGCLSSIVLDASNEHQKS-------YRDNRFVYHFVRQ-HMPSPNLNASDG 807
C + IV+ E +S + + F Y F RQ P+P+L
Sbjct: 707 MTAGRREKAGRCFADIVIVKEEESGQSGNGTTGKRKIDGFTYTFARQGDGPAPSL----- 761
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGR 867
+ + GD V LS E D L +A G +T +S V VS L
Sbjct: 762 ------------LSGHIAVGDPVSLSIEPDLLCLARGYVTALSPSSVQVSMGTKL----- 804
Query: 868 NSSSDADSLL----HE---VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLE 920
D LL HE V+RIDKDE+ + + MR NL QLFL+ + + RR+IVDL+
Sbjct: 805 ----DMAVLLARTKHEGTPVFRIDKDELASGMANMRGNLAQLFLKGGDAIR-RRLIVDLD 859
Query: 921 APRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P+FD+ S P I LN+DQR+A+ +VL+ DY+LILGMPGTGKT+T+
Sbjct: 860 EPKFDA----SGGPEADEI--PPHLNEDQRKAMTQVLSTLDYSLILGMPGTGKTTTIAEI 913
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN- 1039
+KA++ RG ++LLTSYT+SAVD ++ KL +RIG + VH+++Q L A +
Sbjct: 914 IKAIVARGKTVLLTSYTHSAVDTIVTKLLGSDFQILRIGNPQKVHRDVQHLTLEAQGPST 973
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
S++ ++ RL +VVA TCL I + L ++FD CI+DEA Q TLP +GPL +A KFVL
Sbjct: 974 SIDNLEARLMTPQVVATTCLSINHALFHRRRFDYCIVDEASQITLPTCIGPLRYADKFVL 1033
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGDH+QLPP+V+ EAR G+++SLF+RLS+ HP A+ L SQYRM + IM LSN LIY
Sbjct: 1034 VGDHFQLPPIVRKAEARAGGLDVSLFKRLSDAHPSAVVPLSSQYRMNEDIMLLSNKLIYE 1093
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSP----------WLKEALNPCRPVIFVNTDMLPAYEA 1209
DRL CG++ IA +++ + C+ W++ L IFV+TD +PA E
Sbjct: 1094 DRLRCGNEAIAKQALRLPHRAICADVGKSTCDGDCWIQGLLEEESKAIFVDTDAVPAEET 1153
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSSVEIH 1266
+ + NP EA L+ ++ Q LV + I DI +ITPY Q LI ++ + VE+
Sbjct: 1154 RAGDLVQNPAEAALVTQLAQALVASGIRQHDIALITPYRQQIKLISRLMAGAGLGDVEVL 1213
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T DK QGRDKD +LVS VRS N LL DW RINV+ TRAKKKL++ GS +TL++
Sbjct: 1214 TADKAQGRDKDVVLVSLVRS--NDTGSVGELLRDWRRINVSFTRAKKKLVVFGSQKTLNQ 1271
Query: 1327 VPLLKLLINKVGEQSGI 1343
LL+ + + ++ I
Sbjct: 1272 DSLLRKFFDLMAKRKWI 1288
>gi|401882568|gb|EJT46821.1| DNA replication helicase dna2 [Trichosporon asahii var. asahii CBS
2479]
Length = 1351
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 366/1037 (35%), Positives = 548/1037 (52%), Gaps = 130/1037 (12%)
Query: 396 LLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKC--DVGRENNFLIVHPDVL 452
++N GE+R + L + W H + GD VN+I + + G ++ ++ +LI HPDVL
Sbjct: 293 VVNTAGGEQRVLQLKDQWSHLNVREGDIVNIISPQLKEDGPIVLNLKAKSTYLIHHPDVL 352
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEE-- 509
V+ T +A S CPRR +L ++ E A+ G +LH + Q+ L ++ F ++
Sbjct: 353 VTMTAMAGSQPCPRRPLLQSLMRLPEPPSKAMTYGNILHALLQSSLTQQNFDPDFTKQSI 412
Query: 510 YARLVLQKNIESLYACGVNENDIHKTL----VEAIPKM-LNWIILFKDSQDLNTPTVDFG 564
A L + ++ G+++ DI L V+A W+ D D + P +
Sbjct: 413 AAELGDEGRRLEIWGSGLSDKDIEDDLGPMAVDAFSSFGRKWV--GPDVSD-DGPLITSR 469
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK-RNEINGMILPLEFKTGKI 623
+ I+ + DIEE W+PK+GLKG IDAS+++++ + +EI +I PLE KTG+
Sbjct: 470 EEVCGAATITGLHDIEEDIWSPKWGLKGKIDASVQIRLRREGSSEIQDLIAPLEIKTGRS 529
Query: 624 PNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSD----------QTQGVMVQRSD 673
+G + HRAQ +LYTLLM +RY I SGLLYY Q + + + +++ R++
Sbjct: 530 ISG---LSHRAQTLLYTLLMEDRYGLPIPSGLLYYSQLNSVVLIDAKDVEVRSLIMARNE 586
Query: 674 LVGLIMRRNEFANDIIKASTTQQLPPML--RAYGGNKEC--------------------- 710
L ++R + A+ ++ + +EC
Sbjct: 587 LAEWMVRERQSPKAEGDAALAAEIEDVFLPEPIDNPRECMKCFASDACLLYRKVSRRSAL 646
Query: 711 ------SG---------LGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWC 755
SG L F ++ HLT H F RHW+RL+ LE ++ ++ ++W
Sbjct: 647 LADSVQSGNLPPPKDNDLAEKFVENVGHLTPTHVEFFRHWERLVTLEEQDTVRLRAQLWT 706
Query: 756 SRGSGGNHFTGCLSSIVLDASNEHQKS-------YRDNRFVYHFVRQ-HMPSPNLNASDG 807
C + +V+ E +S + + F Y F RQ P+P+L
Sbjct: 707 MTAGRREKAGRCFADMVIVKEEESGQSGNGTTGKRKIDGFTYTFARQGDGPAPSL----- 761
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGR 867
+ + GD V LS E D L +A G +T +S V VS L
Sbjct: 762 ------------LSGHIAVGDPVSLSIEPDLLCLARGYVTALSPSSVQVSMGTKL----- 804
Query: 868 NSSSDADSLL----HE---VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLE 920
D LL HE V+RIDKDE+ + + MR NL QLFL+ + + RR+IVDL+
Sbjct: 805 ----DMAVLLARTKHEGTPVFRIDKDELASGMANMRGNLAQLFLKGGDAIR-RRLIVDLD 859
Query: 921 APRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P+FD+ S P I LN+DQR+A+ +VL+ DY+LILGMPGTGKT+T+
Sbjct: 860 EPKFDA----SGGPEADEI--PPHLNEDQRKAMTQVLSTLDYSLILGMPGTGKTTTIAEI 913
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN- 1039
+KA++ RG ++LLTSYT+SAVD ++ KL +RIG + VH+++Q L A +
Sbjct: 914 IKAIVARGKTVLLTSYTHSAVDTIVTKLLGSDFQILRIGNPQKVHRDVQHLTLEAQGPST 973
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
S++ ++ RL +VVA TCL I + L ++FD CI+DEA Q TLP +GPL +A KFVL
Sbjct: 974 SIDNLEARLMTPQVVATTCLSINHALFHRRRFDYCIVDEASQITLPTCIGPLRYADKFVL 1033
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGDH+QLPP+V+ EAR G+++SLF+RLS+ HP A+ L SQYRM + IM LSN LIY
Sbjct: 1034 VGDHFQLPPIVRKAEARAGGLDVSLFKRLSDAHPSAVVPLSSQYRMNEDIMLLSNKLIYE 1093
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSP----------WLKEALNPCRPVIFVNTDMLPAYEA 1209
DRL CG++ IA +++ + C+ W++ L IFV+TD +PA E
Sbjct: 1094 DRLRCGNEAIAKQALRLPHRAICADVGKSTCDGDCWIQGLLEEESKAIFVDTDAVPAEET 1153
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSSVEIH 1266
+ + NP EA L+ ++ Q LV + I DI +ITPY Q LI ++ + VE+
Sbjct: 1154 RAGDLVQNPAEAALVTQLAQALVASGIRQHDIALITPYRQQIKLISRLMAGAGLGDVEVL 1213
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T DK QGRDKD +LVS VRS N LL DW RINV+ TRAKKKL++ GS +TL++
Sbjct: 1214 TADKAQGRDKDVVLVSLVRS--NDTGSVGELLRDWRRINVSFTRAKKKLVVFGSQKTLNQ 1271
Query: 1327 VPLLKLLINKVGEQSGI 1343
LL+ + + ++ I
Sbjct: 1272 DSLLRKFFDLMAKRKWI 1288
>gi|296426050|ref|XP_002842549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638821|emb|CAZ80284.1| unnamed protein product [Tuber melanosporum]
Length = 1003
Score = 564 bits (1454), Expect = e-157, Method: Compositional matrix adjust.
Identities = 345/955 (36%), Positives = 531/955 (55%), Gaps = 97/955 (10%)
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIP 502
+I+HPD LVS T VA SFSC R++V +R+K + + S + G +LH +FQ L
Sbjct: 1 MIILHPDFLVSSTVVADSFSCVRKAVFQDRVKATGDISKPMVYGNILHSLFQIALEANDF 60
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ-DLNTPTV 561
+ FL + ++ + +ESLY + + L I + +W LF + N
Sbjct: 61 STVFLRKSIDSLVVRYVESLYMLKEPLSVAAEYLCSKIHLIQDWASLFVSKKPKANAFVT 120
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
+ + + I+++ DIEE W+P +GLKGMIDA+++ I ++E + +PLEFKTG
Sbjct: 121 EHRTRYNPVVAITKLLDIEEHVWSPMFGLKGMIDATVQATIIDHKSE-KVLTIPLEFKTG 179
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
K + M HRAQ +LYTLLMS+RY + GLLYYL++ + V R +L G+I+ R
Sbjct: 180 K---STTVMMHRAQTMLYTLLMSDRYDIDVQCGLLYYLENKEMIRVPAIRDELRGMIIGR 236
Query: 682 NEFANDIIKASTTQQLPPMLRAY--------------------GGNKECSGLGNMFDSHI 721
N A+ I + LP MLR+ G + SG+ + F
Sbjct: 237 NRLASYI---RNREVLPDMLRSRYTCGNCYVKETCFIYHKLLEDGTPKTSGVEDHFHDMT 293
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVL--DASNEH 779
HL +H F HWD L+ E K++ + E+W S C +V+ + +
Sbjct: 294 GHLGKSHQKFFGHWDNLLSKEEKDISRFRKELWGLLSSEREALGRCFGQLVIVPGSISVD 353
Query: 780 QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
+ + NR+ Y L +G ++ G +D + G+ +++S E
Sbjct: 354 SSASKINRYTY----------ILTKGEGTAVPGFTF----LDSMINPGEPIVISDEKGHF 399
Query: 840 AVASGLITEISRFHVSVSFSKPL-----RLPGRNSSSD-ADSLLHEV------------- 880
A+A G ITEI V+V + L R PG N ++ + + EV
Sbjct: 400 ALALGYITEIRYNRVTVRVDRRLHNARTRKPGFNKKTNQVFAGIMEVSKDGEEQDFPQSV 459
Query: 881 -------WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD-SGSVFSQ 932
+R+DKDE + +R NL+Q+ A + + R+++VDLE P F S + +S
Sbjct: 460 VPDEGIRYRLDKDEFSNGMASVRNNLIQIMSPRA-NEKYRKLLVDLEPPVFKISPTAYSV 518
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
D + S+ +LN DQR+AI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+L
Sbjct: 519 DSS-----SQTNLNGDQRKAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALVGQGKSVL 573
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQV 1051
LTSYT++AVDN+L+K+K+ +ID +R+G +H E++ L+ S EE+++
Sbjct: 574 LTSYTHTAVDNILLKIKNDNIDTLRLGSGTKIHPEVKSFAQLAEGQKTSFEELRETFHMP 633
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
K+VA TCLG+ +P+ +++KFD CI+DEA Q TLPV LGP+ A+ F+LVGDHYQLPPLV+
Sbjct: 634 KIVATTCLGVNHPIFSERKFDYCIVDEASQITLPVCLGPIRMANTFILVGDHYQLPPLVR 693
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
S EARE G++ISLF+ LS+ HPQ++ L+ QYRMC+ IM LSN LIY +L CG++++A
Sbjct: 694 SPEAREGGLDISLFKLLSDAHPQSVVNLEHQYRMCEEIMTLSNDLIYKGKLKCGNEQVAK 753
Query: 1172 AKIKV------------SDLSSCSP---WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
+++ + + C W+++ FVNTD +PA E + +N
Sbjct: 754 RTLQIPHIGGLVRHHSSTQYTQCGSGPCWIRDLFADGVKACFVNTDNVPAKEVRKGDRIN 813
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRD 1275
NP+EA + ++ + + ++ IG+I+ Y SQ ++++ L + SVE+HT DK+QGRD
Sbjct: 814 NPIEADIAYQLVEGFLSCGVDPSSIGVISVYRSQIKILQNLLRNRPSVEMHTADKFQGRD 873
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
K+ I++S VRS N LL DW RINVA TRA+ KL+++GS TL LL
Sbjct: 874 KEIIVISLVRS--NGDQNVGELLRDWRRINVAFTRARSKLLILGSRSTLQSNELL 926
>gi|430812162|emb|CCJ30384.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1431
Score = 563 bits (1451), Expect = e-157, Method: Compositional matrix adjust.
Identities = 358/1037 (34%), Positives = 559/1037 (53%), Gaps = 106/1037 (10%)
Query: 355 PTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWF 414
P +P +N + V +V E + D + K KV+ L EQ + R + L +DWF
Sbjct: 409 PFNPCKNEVNDLFVSYRVCDVKE--QWIDSHEYKGFQKVIFL--EQ--DNRIIQLRQDWF 462
Query: 415 HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL 474
T + GD + + G++D+ G C V + +I++PD L+S T +A S+SC R++++ E++
Sbjct: 463 FTPVEIGDDLYLHGQYDENGICIVDNSHYLVILNPDYLISCTSIANSYSCIRKTIIQEKV 522
Query: 475 KC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIH 533
K + S S + G +LH +FQ L ++ FL+E + ++ N+ESL G N
Sbjct: 523 KIIGDISKSQVYGKILHCLFQLCLQNSNFSLSFLKEKTQHLILSNLESLDEIGENIESAM 582
Query: 534 KTLVEAIPKMLNWIILFKDSQDLNTPTVD--FGSDGLKK-----LKISEVTDIEEMAWAP 586
+ + + + W + LN P + + LK+ + IS++ IEE W+P
Sbjct: 583 EYICQRFSNLQEWASRYF----LNMPGENSRVTTHQLKQCSSSFISISKLLKIEEHIWSP 638
Query: 587 KYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSER 646
KYGLKG IDA++++ ++S ++ +I P E KTG N SMEHRAQ ILYTLL+S+
Sbjct: 639 KYGLKGSIDATVQIALKSGP-DLQYLIAPFELKTG---NNTKSMEHRAQTILYTLLLSQH 694
Query: 647 YLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGG 706
Y +++ G+L+YL+ +T V +++ GLI+ RN A + Q LP ML+
Sbjct: 695 YDINVNFGILFYLEKGETIQVFAVHNEIRGLIITRNNIAKYL---KNYQNLPCMLKNTFT 751
Query: 707 NKEC----------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVK 750
K C SGLGN FD +T + SF +HW ++ E E +
Sbjct: 752 CKRCPVREPCFANESGTGDTSGLGNYFDEKTNDITPEYRSFFQHWSSMLSKEENETFRFR 811
Query: 751 NEIWCSRGSGGNHFTGCLSSIVLDA----SNEHQKSYRDNRFVYHFVRQHMPSPNLNASD 806
E+W + CLS++ + SN+ + N + Y + +H S N N+
Sbjct: 812 KELWSITSKKREEYGRCLSNLKIKKCHFISNKQEMLENINCYTYT-LEKHCISSNDNSF- 869
Query: 807 GDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPG 866
+D + GDY+I+S ES A+A+G + EI +++S +K L
Sbjct: 870 -------------LDSEISYGDYIIVSDESGHFALANGSVIEIELASITISVNKQLH--- 913
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD- 925
+ +S+L +RIDKDE+ S+ R NL +L L + R +I++L +P+F+
Sbjct: 914 ----KNDESVL---YRIDKDELKNGISLARDNLTKL-LYLKHEERRRELIINLSSPKFNL 965
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+ + F P S + LND Q+ AI KV+TA DYALILGMPGTGK++T+ ++ L+
Sbjct: 966 NFTDFLNIP------SYEELNDSQKAAIFKVMTALDYALILGMPGTGKSTTIACLIQILI 1019
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNI-NSVEEI 1044
++LLTSYT+SA+DN+L+KL + + +R+G E +H +++ ++ I ++ E
Sbjct: 1020 ANNKTVLLTSYTHSAIDNILLKLDVKKENVLRLGSIEKIHPNVKEKVITQEYIVDNSESF 1079
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
+ + + +VA TCLGIT+ + + + FD CI+DEA Q LP+ +GPL F KFVLVGDHY
Sbjct: 1080 QLKYIKPSIVATTCLGITHSIFSKRTFDYCIIDEASQIVLPICIGPLRFTEKFVLVGDHY 1139
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPPL++S + + M+ SLF+ LS+ +P AI L+ QYRM + IM LSN LIY +L C
Sbjct: 1140 QLPPLMRSIDTADQDMKTSLFKHLSDANPIAIVNLEYQYRMNKDIMLLSNTLIYNGKLKC 1199
Query: 1165 GSDEIANAKIKVSDL---------SSC-------SPWLKEALNPCRPVIFVNTDMLPAYE 1208
G ++ A ++ D +C W+K+ L P VIF NTD +PA E
Sbjct: 1200 GDEKTACKFLEYGDFYILDKLHSKKNCEYICNINECWIKKILEPGLSVIFANTDYVPAPE 1259
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTI 1268
++ + N +E L+ +I L+ + I +++ Y SQ LI +I T+
Sbjct: 1260 SRKGDRIQNDIEVELLKQIVICLLSQGVSESRIAVLSVYRSQIKLI---------QIDTV 1310
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
D +QGRDKDCI++SFVRS N +N LL DW R+NVA TRAK KLI GS TL +
Sbjct: 1311 DSFQGRDKDCIIISFVRS--NSKNKIEGLLRDWRRLNVAFTRAKSKLIFFGSKSTLKLIG 1368
Query: 1329 LLKLLINKVGEQSGILN 1345
+ L N + ++ I +
Sbjct: 1369 IFGLFFNLLADKQWIYD 1385
>gi|148227244|ref|NP_001079231.1| DNA replication ATP-dependent helicase/nuclease DNA2 [Xenopus laevis]
gi|82105075|sp|Q8QHA5.1|DNA2_XENLA RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
gi|18845092|gb|AAL79550.1|AF474372_1 helicase [Xenopus laevis]
Length = 1053
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 365/1025 (35%), Positives = 546/1025 (53%), Gaps = 108/1025 (10%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
V A+ K L + Q G++ + L +DW I PGD +++ G + R+
Sbjct: 62 VYAQREEKHLTITASQEGDDLELCILKDDWVALQIKPGDIIHLEGNCSVDNTWTISRDTG 121
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIP 502
+LI++PD+L+SGT +A C RRSVL E+ K C + S L GT+LH IFQ
Sbjct: 122 YLILYPDLLISGTSIANGIRCLRRSVLSEKFKVCDKGSRQMLNGTMLHDIFQRATTCGF- 180
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFK----DSQDL 556
T L+E A + K ++ +Y +N+ D+ + E +P + W F + Q +
Sbjct: 181 TDSVLQELAHHTVHGPKYLKEMYQLKLNQADVMGEIQEYLPSLSKWATDFMTHPLNQQQI 240
Query: 557 NTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPL 616
N T D + K+SE DIEE W+P++GLKG ID + RVKI K ++ + I+PL
Sbjct: 241 NR-TKSTAGDPTETTKVSEFLDIEENIWSPRFGLKGKIDVTARVKIHQK-SKAHLKIMPL 298
Query: 617 EFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVG 676
E KTGK N S+EHR+QV+LYTLL ER + ++GLL YL++ V R D
Sbjct: 299 ELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGLLLYLKTGNMYTVPGNRLDRRE 354
Query: 677 LIMRRNEFANDII----------KASTTQQLPPMLRAYGGNKECSGLGN----------- 715
L+ RNE + + K +T LP M+ K CS + N
Sbjct: 355 LLKIRNELSYYLTNVLHKSDNGSKETTLASLPAMIADRQACKYCSQMRNCALYNRSVEQQ 414
Query: 716 ------------MFDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRGSGG 761
+ HLT H + R W + LEA K+ ++ + IW S
Sbjct: 415 TENCYIPPEMIPVVQKETEHLTEDHLQYFRLWYLMCTLEANSKDSKMGRKNIWMMSSSER 474
Query: 762 NHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD 821
C+ +++ H ++ D ++++ F R+ P N
Sbjct: 475 EEDGQCIGNLIRTG---HVQTISDVQYLHSFQRRSGSVPATN------------------ 513
Query: 822 CTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEV 880
L SGD V++S E LA+++G I E+ +++ + L +LP + LL
Sbjct: 514 --LASGDRVVVSGEERFLALSTGYIKEVKDENITCILDRSLVKLP--------EDLL--- 560
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSY 938
+R+D +E NL +L S+ S +LR++I+D P F S+ D
Sbjct: 561 FRLDHEEGGGGLEFHLGNLSRLMENSSVSEKLRKLIIDFSKPNFVQHLSSILPPDAKDIV 620
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ LN Q++A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+
Sbjct: 621 ASILRGLNKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTH 680
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVV 1054
SAVDN+L+KLK + F+R+GR + +H ++Q+ A +I S+ +++ + VV
Sbjct: 681 SAVDNILLKLKKFQVGFLRLGRTQKLHPDVQEFSEEEICKAKSIKSLSALEELYNSQPVV 740
Query: 1055 AVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
A TC+G+ +P+ T ++FD CI+DEA Q + P+ LGPL FA +FVLVGDH QLPPLV+S E
Sbjct: 741 ATTCMGVNHPIFTRRRFDFCIVDEASQISQPICLGPLFFADRFVLVGDHQQLPPLVKSAE 800
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
ARE GM SLF+RL E + +A+ L QYRM IM LSN L+Y RL C SD ++NA +
Sbjct: 801 ARELGMSESLFKRL-ERNQEAVVQLTVQYRMNSKIMALSNKLVYEGRLECASDRVSNAVV 859
Query: 1175 KVSDLSSC-----------SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
++ + + S W+K+ L P PV F+NT+ +PA E ++ ++N +EA L
Sbjct: 860 QLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALETEEKGGISNWIEAKL 919
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIR---HSLSVSSVEIHTIDKYQGRDKDCIL 1280
+ +T+ +K DIGII PY Q +I +SLS S+VE++T+DKYQGRDK I+
Sbjct: 920 VFHLTKLYLKAGCRPSDIGIIAPYRQQLKMISNYFNSLSASAVEVNTVDKYQGRDKSVII 979
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
VSFVRS+ + + LL DW R+NVALTRAK KLIM+G TL++ L+ LI + +
Sbjct: 980 VSFVRSNIDGK--LGDLLKDWRRLNVALTRAKHKLIMLGCVPTLNRFDCLEQLICNLKTE 1037
Query: 1341 SGILN 1345
+ I +
Sbjct: 1038 NQIYD 1042
>gi|225559758|gb|EEH08040.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 1612
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/921 (35%), Positives = 503/921 (54%), Gaps = 107/921 (11%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHP 449
P +VL + E++ RA+ L E W+ T A G +++IG FD G+C V N +I+HP
Sbjct: 563 PQRVLFVQEEKTNNNRAISLRESWYDTPCAKGSYIHLIGSFDLMGQCVVDNSENLIILHP 622
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
D L+S T VA SF+CPRR+VL +R+K SE + + G +LH+IFQA + +L
Sbjct: 623 DHLISATVVADSFTCPRRAVLQDRVKATSEANKPQVYGHILHEIFQAAASANRWDLNWLR 682
Query: 509 EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL 568
E L+ +ESLY V ++ + L+ +P + W F S V+ +
Sbjct: 683 EVISSTLEHYVESLYEIQVEFSEATEYLMSKMPALQAWAETFMRSHPTRESIVEDRNGTS 742
Query: 569 KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
L I+++ +IEE W+P YGLKG IDA+++V ++ + +P E KTG+ S
Sbjct: 743 SCLSINKLLEIEEHIWSPMYGLKGNIDATVQVVVQEGTGR-KTLTVPFELKTGR---NHS 798
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
+ HRAQ LYTLL+S+RY + GLLYYL+S +T V R++++ +I +RN A I
Sbjct: 799 NEAHRAQTALYTLLLSDRYDIDVTFGLLYYLESTKTFRVRAIRNEILQIIQQRNRLAEFI 858
Query: 689 IKASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAH 728
K S +LPPML+ Y G+ E SG+G+ F + HLT +H
Sbjct: 859 YKNS---ELPPMLKQSRICNQCYAKNACFIYHKVMDDGDGESSGMGSSFLEVVGHLTPSH 915
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RDN 786
+F + WD L+ +E +++ + E+W + C +++++ + ++++ + N
Sbjct: 916 QNFFKKWDALLTMEERDIIKFRRELWTMLSNEREGVGRCFGNVMVEPGSAYEETGVPKIN 975
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
RF Y F + PS N + GDS L G+ +++S E A+A+G I
Sbjct: 976 RFRYTFYKYKPPS---NFTFGDS-------------QLSVGEPIVVSDEKGHFALANGYI 1019
Query: 847 TEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--------------------------- 879
T ISR +SV+ + L R S+ D+ H+
Sbjct: 1020 THISRKRISVAVDRRLH-NARMRCSNFDAERHQAFTGIMGIIETGGSESTILLERVEDTN 1078
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQS-AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
++R+DKDE + +R NLV + ++ Q+ +LR +I+D AP F+S S S P L+
Sbjct: 1079 LYRLDKDEFSNGMATVRNNLVCMMDRNMPQTRRLRDLIIDGHAPSFNSISS-STIPWLA- 1136
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
LN DQ+ AI KV++A DYAL+LGMPGTGKT+T+ H ++AL +G S+LLTSYT+
Sbjct: 1137 ---GTELNIDQKGAIEKVMSANDYALVLGMPGTGKTTTIAHIIRALASQGKSVLLTSYTH 1193
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+K+K +I +R+G +H +++K L+A ++EE+K + ++VA T
Sbjct: 1194 TAVDNILLKIKDDNIRTLRLGATTKIHPDVRKFADLAATPKETIEELKDIYENSRIVATT 1253
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +P+ + FD CI+DEA Q TLPV LGP+ A F+LVGDHYQLPPLVQ +A+E
Sbjct: 1254 CLGINHPIFNSRMFDFCIVDEASQITLPVCLGPIRMAKTFILVGDHYQLPPLVQDKQAQE 1313
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+++SLF+ L + HP ++ L+ QYRMC+ IM LSN LIY L CG+ E+A + +K+
Sbjct: 1314 GGLDVSLFKLLCDLHPASVVNLEHQYRMCEDIMLLSNILIYSGHLKCGTPEVAKSYLKIP 1373
Query: 1178 DL----------SSCSP--------------WLKEALNPCRPVIFVNTDML--PAYEAKD 1211
+L SS SP W+++ L+P VNTD L A E+
Sbjct: 1374 NLHGLKQHHVDPSSLSPNLRNSCLGSRYGRCWIRDLLDPVARTRLVNTDPLQPQAIESSK 1433
Query: 1212 HQTLNNPVEACLIAKITQELV 1232
+ N +EA L A+ + +
Sbjct: 1434 GSRIINHIEAVLCAQFVESFL 1454
>gi|353241680|emb|CCA73479.1| related to DNA helicase, partial [Piriformospora indica DSM 11827]
Length = 1090
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 351/999 (35%), Positives = 528/999 (52%), Gaps = 115/999 (11%)
Query: 384 PVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEF-------DDQGKC 436
P A+ +L E+S + V L DW +T I+PGD +NVIG F + +
Sbjct: 112 PTAARREKVLLVAFGEKSKDLHQVILQADWAYTDISPGDVINVIGNFVPAAQDLEYKSTI 171
Query: 437 DVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQA 495
+ + +F+++HPD+LV+ T +A + C RR + L + + L+ GT+LH+I QA
Sbjct: 172 TITVQQHFIVLHPDLLVTATAIANASYCQRRPHISTLLSTASKPTPVLIWGTILHEIMQA 231
Query: 496 GLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLV----EAIPKMLNWIILFK 551
L F+ E +L+ N++SL VN D+ K + + + + I
Sbjct: 232 CLQTGKWDDTFIHEATDRLLRANMDSLVQLDVN-VDVAKAEIGKRAQGLREFSRRYIGTG 290
Query: 552 DSQDLNTPTVDFGSDGLKK----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
+Q + S K L I + EE W+P+YG+KG +DAS+RV +E +
Sbjct: 291 VNQKPRANAILSDSHAPKGQKALLAICGLHATEEDIWSPRYGIKGKLDASLRVVLEESEH 350
Query: 608 --EINGMIL--PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQ 663
+ N M++ P E KTG +SSMEHRAQ +LYT+LM ERY + +GLLYY QS++
Sbjct: 351 GKDANRMVMDMPFEIKTG---TSKSSMEHRAQTMLYTVLMEERYGTQVPAGLLYYTQSEE 407
Query: 664 TQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ---------LPP--------------- 699
V R++L LI RN + K + LPP
Sbjct: 408 LIRVSAARNELRALIQSRNNMVAYMHKRTALAAKSGGEPLPFLPPTEDDERTCRRCYVVD 467
Query: 700 ---MLRAYGGNKE--CSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW 754
+ R N E S + ++ HLT C+F + W+ LI LE +EM + E+W
Sbjct: 468 GCMLYRKAVENVEDTTSEIAEIYRDRTGHLTPPQCAFFKDWEALISLEEQEMIKFRKELW 527
Query: 755 CSRGSGGNHFTG-CLSSI-VLDASNEHQKSYRDNR---------------FVYHFVRQHM 797
+ G+ TG CL+++ ++ S+ H R + + Y F R+
Sbjct: 528 -TMGAEQREKTGRCLANMELVGPSSAHLADERAKQQQQSIQMQSGSKVYPWTYTFRRRRT 586
Query: 798 P--SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVS 855
P S L+ D SLI I GD + +S E D LA + G + + ++
Sbjct: 587 PQSSSGLDPKDSASLINGHIS---------RGDAITVSVEPDLLAYSRGYVLALEPEQIT 637
Query: 856 VSFSKPL---RLPGRNSSSDADSLLHEV-----WRIDKDEIMTSFSVMRYNLVQLFLQSA 907
V + L +L RN + L +V +R+D+DE+ S +R NL QLF +
Sbjct: 638 VGVERELDLAKLISRNHDVEEFGLRTKVDSGIVFRLDRDEVSAGISRIRNNLAQLFFKDG 697
Query: 908 QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILG 967
+L +VDL+ PRF D + + +LN QR A+ KVL A+DYA++LG
Sbjct: 698 DKRRLES-VVDLKPPRFKE---LETDKT---VVNAAALNASQRLAMKKVLAAEDYAILLG 750
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKE 1027
MPGTGKT+T+ +K L+ RG S+LLTSYT+SAVD +L+KL D +R+G + VH
Sbjct: 751 MPGTGKTTTIAEIIKELVRRGKSVLLTSYTHSAVDTILMKLLDVDFDVLRLGNSDRVHPA 810
Query: 1028 IQKHCLSAM-NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPV 1086
+ K L+A SV E++++L +VVA TCL I + L + ++FDVCI+DEA Q TLP
Sbjct: 811 VHKMTLAARPRPTSVGELERQLLSPQVVATTCLSIDHTLFSRRRFDVCIVDEASQITLPT 870
Query: 1087 SLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
LGPL FA KFVLVGDH+QLPPLV+S +AR+ G+++SLFRRLSE HP+A+ LQ QYRM
Sbjct: 871 CLGPLRFADKFVLVGDHFQLPPLVKSVQARKGGLDVSLFRRLSEAHPEAVVELQEQYRMN 930
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDL---------------SSCSPWLKEALN 1191
+ +M++SNALIY +RL CG++E+A + + DL + S W+++ ++
Sbjct: 931 EDVMKVSNALIYENRLKCGNEEVAKRSLTI-DLPRAMEQTHQHGKVTCTGTSCWIRDLVD 989
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
R V+FV+TD +PA E+K + N EA ++ + + L+ ++ IG+I+ Y Q
Sbjct: 990 ANRHVVFVDTDSVPAKESKVGDLVQNTTEAAILQQTVKALLHGGVQESQIGVISLYRQQV 1049
Query: 1252 NLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
L+ H L VEI T D+ QGRDKDCI++S VRS+++
Sbjct: 1050 KLLSHMLDDHRGVEILTADRSQGRDKDCIIISMVRSNDS 1088
>gi|452989404|gb|EME89159.1| hypothetical protein MYCFIDRAFT_104185, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1503
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 353/1068 (33%), Positives = 544/1068 (50%), Gaps = 159/1068 (14%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNV-----------IGEFDDQGKC--DV 438
KVLR+ +E++ + L + W T ++ G+ VN+ + G+ D
Sbjct: 450 KVLRIEDERTRASEVIILRDSWLDTAVSKGNIVNIAKLRRHSNSTPVASSPPSGETFIDD 509
Query: 439 GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGL 497
++NFLIVHPD ++S T VA SF C R++VL +R+K + E + S + G +LH+IFQ L
Sbjct: 510 TEQSNFLIVHPDHMLSATTVADSFDCVRKAVLQDRIKATGETNKSMVYGKILHEIFQQCL 569
Query: 498 MKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA-IPKMLNWIILFKDSQDL 556
+ KFL E +Q ++E L+ G+ +N + V+A + ++ W +F S+
Sbjct: 570 SADRWDQKFLNEMVERTVQAHVEGLWELGMRDNVLAIEEVKAKMGELEAWSRVFVKSEPA 629
Query: 557 NTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN--EINGMIL 614
TVD G + IS++ IEE W+P+YGLKG IDA+++ S+ ++ +I+
Sbjct: 630 ADSTVDDRQGGKVLMSISKLIAIEEHVWSPRYGLKGNIDATVQATTTSRPGAPDLRNLIV 689
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
P E KTG+ S HRAQ LYTLL+S+RY + +G+LYYL+S + +++
Sbjct: 690 PFEVKTGRT---TQSASHRAQTALYTLLLSDRYDVEVGAGILYYLESSSMSRIAPPFNEV 746
Query: 675 VGLIMRRNEFANDIIKASTTQQ---------------------LPPMLR----------- 702
++ +RN A+ I +A + LP +LR
Sbjct: 747 KQMVQQRNRLASYIFRARNPPEANAAGHLTSLPAASQPMEESGLPALLRNPFKCGRCYAQ 806
Query: 703 ---------AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEI 753
G E +G M D + TT + WD+L+ E ++ ++ E+
Sbjct: 807 ESCFSYHALVENGTFESAG---MIDDNKKTHTTTLKKWFARWDKLLTFEERDQSRLRKEL 863
Query: 754 WC----SRGSGGNHFTGCLSSIVLDASNEHQK-------------SYRDNRFVYHFVRQH 796
W R S G C ++++ H K + NR+ Y F R
Sbjct: 864 WTMTSFERESAGR----CFGNLIIKEDLPHSKVASQAAVDDIEGSGGKINRYAYSFKR-- 917
Query: 797 MPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSV 856
+P S G S + L G+ V++S+E + A+A+G +T++S +SV
Sbjct: 918 --AP---GSSGGSFTEGS--------QLTVGEPVVVSSEEGQWALANGYVTKVSPAKISV 964
Query: 857 SFSKPL------------------RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYN 898
+ + L R ++ + D+ +R+DKDE +++R N
Sbjct: 965 AVDRKLGNARMREADFDGKNNQAFRGLSKDQARRDDNQQQMRYRLDKDEFSNGLALVRNN 1024
Query: 899 LVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS----LNDDQRRAII 954
LV+L +LR I+ FD F+ PA + + +NDDQ+ A+
Sbjct: 1025 LVRLMSAHPIHEKLREQII------FDMRPTFTPSPACRNESANPTQLGTMNDDQQHAVE 1078
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL A DYALILGMPGTGKT+T+ H ++ALL SILLTS+T++AVDN+L+K+K +
Sbjct: 1079 KVLAADDYALILGMPGTGKTTTIAHIIRALLAENKSILLTSFTHTAVDNILLKIKDLVPE 1138
Query: 1015 --FVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKF 1071
+R+G ++ ++Q+ L+A +++EE+ +VA TC+G + L + F
Sbjct: 1139 NSVLRLGVPAKINTQVQEFVQLAAKPRSTIEEVDDAFMGTSIVATTCMGTNHALFNRRSF 1198
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
DVCI+DEA Q TLP LGPL+ A KFVLVGDHYQLPPLVQ+ A E G+++SLFR+LSE
Sbjct: 1199 DVCIVDEASQITLPTILGPLLHARKFVLVGDHYQLPPLVQNKAALEGGLDVSLFRQLSEA 1258
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL------------ 1179
P A+ L QYRMC+ IM LSN LIY +L CG++ +A+ ++ D+
Sbjct: 1259 QPDAVVDLGRQYRMCEDIMTLSNELIYHGKLRCGNEAVASRILQADDVGALNRLHDEHAP 1318
Query: 1180 -----SSCSPWLKEALNPCRPVIFVNTDML--PAYEA-KDHQTLNNPVEACLIAKITQEL 1231
S+C WL P + V+F NT L A E + N +EA L+A+ L
Sbjct: 1319 CYTMPSTC--WLNRVTEPNQRVLFANTSQLGTSALETLSGGGKITNNLEATLVAQSVLAL 1376
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVS----SVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ + G +IG+IT Y SQ L+R + SVEI + D++QGRDK+CI++S VRS
Sbjct: 1377 IARGVPGSEIGVITLYRSQLALMRQLFRRANIPDSVEIDSADRFQGRDKECIIISMVRS- 1435
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
N LL DW R+NVALTR + KL++ G+ TL LL+ +++
Sbjct: 1436 -NAVRIVGDLLKDWRRVNVALTRGRSKLVVFGNRETLKHNELLEKMLS 1482
>gi|426255660|ref|XP_004021466.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Ovis
aries]
Length = 1062
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 364/1006 (36%), Positives = 537/1006 (53%), Gaps = 114/1006 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 83 LRNDWCSVQVEPGDIIHLEGDCISDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 140
Query: 468 SVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GTLLH++FQ + K L+E A +Q ++++ +Y
Sbjct: 141 AVLSETFRSSDPATRQMLIGTLLHEVFQKAISDSFAPEK-LQELASQTIQEIRHLKEMYR 199
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKK-----LKISEV 576
+N+++I + + E +P W F S D + SDG +++
Sbjct: 200 LKLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIEVINS 259
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 260 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQL 315
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---IKAST 693
+LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I ST
Sbjct: 316 VLYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRINKST 374
Query: 694 TQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI------------YHL 724
++ LP ++ K CS +GN M DS + HL
Sbjct: 375 GEEKTKLAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKEETQHL 434
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
H + W ++ LE++ +N +W S C+ S++ EH K+
Sbjct: 435 KLTHLEYFSLWCLMLTLESQSKDNKRNYQHVWLMPASEVEESGSCIGSLI---RTEHVKT 491
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AV 841
D +++++F R+ AIP + L +GD +ILS E L A+
Sbjct: 492 VCDGQYLHNFQRK----------------SGAIPITN----LMAGDRIILSGEERTLFAL 531
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
+ G + EI+ V+ S RN S +S L +R+D++E NL +
Sbjct: 532 SRGYVKEINSTTVTCSLD-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGNLSK 581
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
L + S +LR +I+D P+F S SV D + K LN QR+A+ KVL +
Sbjct: 582 LMENTHASQKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLS 641
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G
Sbjct: 642 KDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLG 701
Query: 1020 RHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K FD C
Sbjct: 702 QIQKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFC 760
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++
Sbjct: 761 IVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKN 819
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SC 1182
A+ L QYRM IM LSN L Y +L CGSD++ANA I + + S
Sbjct: 820 AVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSE 879
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+PWL A P PV F+NT +PA E + ++N +EA L+ +T +K + DIG
Sbjct: 880 NPWLVGAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIG 939
Query: 1243 IITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
II PY Q +I L SV VE++T+D+YQGRDK I+VSFVRS+E+ LL
Sbjct: 940 IIAPYRQQLKVINDLLAHSSVGMVEVNTVDRYQGRDKSIIIVSFVRSNED--GTLGELLK 997
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
DW R+NVA+TRAK KLI++G +LS+ P L L+N + + I++
Sbjct: 998 DWRRLNVAITRAKHKLILLGCVPSLSRYPPLGKLLNHLNSEKLIID 1043
>gi|296472072|tpg|DAA14187.1| TPA: DNA replication helicase 2 homolog [Bos taurus]
Length = 1137
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 360/1004 (35%), Positives = 539/1004 (53%), Gaps = 111/1004 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + + +LI++PD+L+SGT +A+S C RR+
Sbjct: 159 LRNDWCSVPVEPGDIIHLEGDCISNTWI-IDEDFGYLILYPDMLISGTSIASSIRCMRRA 217
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 218 VLSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEK-LQELASQTIQEIRHLKEMYRL 276
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKK-----LKISEVT 577
+N+++I + + E +P W F S D + SDG ++++
Sbjct: 277 KLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIEVTNSL 336
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q++
Sbjct: 337 DIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQLV 392
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---IKASTT 694
LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I ST
Sbjct: 393 LYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRINKSTG 451
Query: 695 QQ-----LPPMLRAYGGNKECSGLGN-----------MFDSHI------------YHLTT 726
++ LP ++ K CS +GN M DS + HL
Sbjct: 452 EKTELAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKEETQHLKP 511
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
H + W ++ LE++ +N IW S C+ S++ EH K+
Sbjct: 512 IHLEYFSLWCLMLTLESQSKDNKRNYQHIWLMPASEMEESGSCIGSLI---RIEHVKTVC 568
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVAS 843
D +++++F R++ AIP + L +GD +ILS E L A++
Sbjct: 569 DGQYLHNFQRKN----------------GAIPITN----LMAGDRIILSGEERTLFALSR 608
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G + EI+ V+ S RN S +S L +R+D++E NL +L
Sbjct: 609 GYVKEINSTTVTCSLD-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGNLSKLM 658
Query: 904 LQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ S +LR +I+D P+F S SV + + K LN QR+A+ KVL +KD
Sbjct: 659 ENTRASQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKVLLSKD 718
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
Y LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G+
Sbjct: 719 YTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQI 778
Query: 1022 EVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
+ VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K FD CI+
Sbjct: 779 QKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTFDFCIV 837
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+
Sbjct: 838 DEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNKNAV 896
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCSP 1184
L QYRM IM LSN L Y +L CGSD++ANA I + + S +P
Sbjct: 897 VQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYADYSENP 956
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WL A P PV F+NT +PA E + ++N +EA L+ +T +K + DIGII
Sbjct: 957 WLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPSDIGII 1016
Query: 1245 TPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
PY Q +I L SV VE++T+D+YQGRDK ++VSFVRS+E+ LL DW
Sbjct: 1017 APYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNED--GTLGELLKDW 1074
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRAK KLI++G +LS+ P L+ L+N + + I++
Sbjct: 1075 RRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIID 1118
>gi|321259457|ref|XP_003194449.1| DNA replication helicase dna2 [Cryptococcus gattii WM276]
gi|317460920|gb|ADV22662.1| DNA replication helicase dna2, putative [Cryptococcus gattii WM276]
Length = 1100
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 359/1064 (33%), Positives = 540/1064 (50%), Gaps = 137/1064 (12%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEF-----DDQGKCDVG 439
VD S K L + + G VHL + W + GD +N+I
Sbjct: 3 VDEVSFAKTLVVSLTEGGGREVVHLKDRWADIEVRKGDIINIISPLLTTRNTKPISVTFK 62
Query: 440 RENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLM 498
+ FLI HPD++++ T +A + CPR+ ++ ++ LL GTLLH + Q L+
Sbjct: 63 DPSTFLIHHPDLMITMTSIANAMPCPRKPIIQSLIRTPGPPTKPLLYGTLLHSLLQGALL 122
Query: 499 KEI----PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ 554
++ T + L+ A L + +++ G+ D+ + E K +F +
Sbjct: 123 QQDFDAGGTFRRLD--AELKKDEIKLEIWSTGMGILDVRE---EVGMKAGRGFEVFGERY 177
Query: 555 DLNTPTVDF-----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI---ESKR 606
P + D L IS + ++EE W+PK+GLKG +DAS++ KI +
Sbjct: 178 ITKDPKPEGELHSSAGDQPALLAISGLHEVEEDIWSPKWGLKGKMDASVQAKIIRDLAHD 237
Query: 607 NEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG 666
+ + PLE KTG+ M HRAQ +LYTLLM +RY + +GLLYY D
Sbjct: 238 TQFEEHVAPLEIKTGR---SVGVMAHRAQTMLYTLLMEDRYGVPVPAGLLYYSALDTILR 294
Query: 667 VMVQRSDLVGLIMRRNEFAN-------------------DIIKASTTQQ----------- 696
V +++++ LIM RNE A +I++ ++
Sbjct: 295 VEAKQNEIRALIMARNELAMYISKQRKVPKHLPEDDRPVEILRGGVVKKGLLKEEREEKE 354
Query: 697 ---------LPPMLRAYGGNKECSGLGN---------------------MFDSHIYHLTT 726
LPP L K C + + +++ H H+T
Sbjct: 355 LEAEVEEAFLPPTLDNMRDCKMCYAVESCMLYRKAIDKAPHDPEDPIVELYEEHTGHMTE 414
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDA-SNEHQKSY-R 784
F + WD L+ +E ++ ++++W C S +++++ SN+ KS +
Sbjct: 415 KDAEFYKKWDTLLTVEEQDTVKFRSQLWTMTAKQREKNGRCFSDMIIESYSNDLGKSLAK 474
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
+R Y F+R +P+ + + SL+ I GD V LS E D L + G
Sbjct: 475 IHRHSYTFIR----APSAISENVTSLLSGHIA---------KGDPVSLSIEPDLLCMWRG 521
Query: 845 LITEISRFHVSVSFS------KPLRLPGRN----SSSDADSLLHEVWRIDKDEIMTSFSV 894
+T++++ V+V + L+ GR +SD S V+RIDKDE+ +
Sbjct: 522 FVTDLTQTSVTVGVTYVINTDALLKRTGREHRVLKASDGQSQDKVVFRIDKDEMASGMMR 581
Query: 895 MRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
MR NL QLF ++ ++ RR+IVD AP F+ S P S I + SLN DQ++A+
Sbjct: 582 MRNNLAQLFYKNGDEAR-RRLIVDQAAPEFEP----SWRPKPSEIPA--SLNSDQQKAMK 634
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
VLTA+DY+LILGMPGTGKT+T+ +KAL+ RG S+LLTSYT+SAVD +L+KL
Sbjct: 635 SVLTARDYSLILGMPGTGKTTTIAEIIKALVARGKSVLLTSYTHSAVDAILMKLTDVEFG 694
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNIN-SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
+R+G + VH ++Q L A + S++++ RL VVA TCL I +PL ++FD
Sbjct: 695 VLRLGNIDKVHPDVQHLTLEAYEASASMDQLDARLMTPPVVAATCLAIDHPLFFRRRFDY 754
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
CI+DEA Q TLP +GPL A KFVLVGDHYQLPP+V+ +EAR G+++SLFR LS HP
Sbjct: 755 CIVDEASQITLPTCIGPLRMADKFVLVGDHYQLPPIVRHSEARRGGLDVSLFRHLSAAHP 814
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP--------- 1184
A+ L QYRM + IM LSN L+Y RL CG++++A + +K+ C
Sbjct: 815 SAVIDLSYQYRMNEDIMTLSNKLVYEGRLKCGNEQVARSGLKLRSRKRCGEIFGEAGCTC 874
Query: 1185 ------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
W++ L +F++TD +PA +++ + N EA L+ +++ LV + +
Sbjct: 875 HQGKQCWIQYLLEEDAKCVFIDTDEVPALDSRVGDLVQNETEARLVQQLSTALVASGVRQ 934
Query: 1239 KDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
+DI IITPY Q L+ L + VEI T DK QGRDKDCILVS VRS+E+ L
Sbjct: 935 EDIAIITPYRQQIKLLSSYLRPIPRVEILTADKSQGRDKDCILVSLVRSNES--GNIGDL 992
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
L DW RINV+ TRAKKKL++ S +TL+ PL K + V E+
Sbjct: 993 LRDWRRINVSFTRAKKKLVIFASAKTLNADPLFKEFLELVREKG 1036
>gi|334313841|ref|XP_001369134.2| PREDICTED: DNA2-like helicase [Monodelphis domestica]
Length = 1038
Score = 527 bits (1358), Expect = e-146, Method: Compositional matrix adjust.
Identities = 355/995 (35%), Positives = 526/995 (52%), Gaps = 113/995 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L ++W + PGD +++ GE+ + ++ +LI++PD+L+SGT VA S C RR+
Sbjct: 72 LRDEWDDLSVEPGDIIHLEGEYKADAWI-IDKDFGYLILYPDMLISGTSVANSIRCMRRA 130
Query: 469 VLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL+E + C S L+GT+LH+IFQ + T + L+E A +Q K+++ +Y
Sbjct: 131 VLNENFRSCDSSSHQMLIGTVLHEIFQKAINDSF-TQEKLQELALQTIQEIKHLKEMYYL 189
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLK-----KLKISEVT 577
+ E+ + + + +P W F S DL SD K +++++E
Sbjct: 190 NLKEDVFKQEIEDYLPSFSKWAEEFMHGPMSADLPMMQQTLLSDRNKNESPYRIQVTEAL 249
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + ++ ++PLE KTGK N S+EHR+QV+
Sbjct: 250 DIEENIWSPRFGLKGKIDVTVNVKIH-RGSKATCRVMPLELKTGKESN---SIEHRSQVV 305
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA--------NDII 689
LYTLL ER ++GLL YL++ V R D LI RN+ A I
Sbjct: 306 LYTLLSQERRADP-EAGLLLYLRTATMYPVPANRLDRRELIKLRNQLAFYLSHSVTKSIA 364
Query: 690 KASTTQ--QLPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHL 724
+ TQ LPP++ K CS N + HL
Sbjct: 365 EKEQTQLTPLPPVINDSFACKYCSQTYNCALYSRAVEQPMDKSLAAGATLPKIEKMTQHL 424
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
+H + W ++ LE++ K+ IW + C+ +++ E ++
Sbjct: 425 KYSHLQYFSLWYLMLTLESQSKDTRKSHRNIWLMSAAEREKTGDCIGNLM---RTEDVQT 481
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AV 841
+ ++++ F +H PN N L +GD V+LS E RL A+
Sbjct: 482 ICNGQYLHTFQHKHGTIPNTN--------------------LMTGDRVMLSGEERRLLAL 521
Query: 842 ASGLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
+SG + I+R V+ + L +LP ++R+D +E + NL
Sbjct: 522 SSGYVKAITRTTVTCLLDRNLSKLPRVT-----------LFRLDHEERIGGIETPLGNLS 570
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
+L + S +LR +I+D P+F SV + + K LN QR+A+ KVL
Sbjct: 571 KLMENTPVSEKLRDLIIDFREPQFIQYLSSVLPHEAKDTVANILKGLNKPQRQAMKKVLL 630
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
+KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL + F+R+
Sbjct: 631 SKDYTLIVGMPGTGKTTTICALVRILYACGFSVLLTSYTHSAVDNILLKLMKFKVGFLRL 690
Query: 1019 GRHEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVC 1074
G+ + VH IQK + +I S+ +++ + +VA TC+ I +P+ + K+FD C
Sbjct: 691 GQTQKVHPNIQKFTEEEICREKSIKSLTSLEELYNSQPIVATTCMAINHPIFSRKRFDFC 750
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q + PV LGPL F+SKFVLVGDH QLPPLV ++EAR GM SLF+RL E+
Sbjct: 751 IVDEASQISQPVCLGPLFFSSKFVLVGDHLQLPPLVLNSEARGLGMSESLFKRL-EQKQN 809
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SC 1182
A+ L QYRM IM LSN L+Y +L CGSD +ANA + + L S
Sbjct: 810 AVVQLTVQYRMNSTIMSLSNKLVYEGKLECGSDRVANAIVSLPFLKNVMLDLQARTDHSQ 869
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ WLKEA P PV F+NT+ +PA E + ++N +EA LI + +K DIG
Sbjct: 870 TSWLKEAFEPNNPVCFLNTEKIPAPEQAEKGGVSNIIEAKLIVFLASVFIKAGCNPLDIG 929
Query: 1243 IITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
II PY Q +I H L SV++VE++T+DKYQGRDK ILVSFVRS N LL
Sbjct: 930 IIAPYRQQLKIITHLLNHSSVNTVEVNTVDKYQGRDKSIILVSFVRS--NKDGNLGELLK 987
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
DW R+NVA+TRAK KL+++G +LS+ P L+ L+
Sbjct: 988 DWRRLNVAITRAKHKLVLLGCVPSLSQYPPLEKLL 1022
>gi|408407704|sp|E1BMP7.3|DNA2_BOVIN RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1061
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 361/1009 (35%), Positives = 540/1009 (53%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + + +LI++PD+L+SGT +A+S
Sbjct: 83 LRNDWCSVPVEPGDIIHL------EGDCISNTWIIDEDFGYLILYPDMLISGTSIASSIR 136
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 137 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEK-LQELASQTIQEIRHLK 195
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKK-----LK 572
+Y +N+++I + + E +P W F S D + SDG ++
Sbjct: 196 EMYRLKLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIE 255
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
++ DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 256 VTNSLDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEH 311
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---I 689
R+Q++LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I
Sbjct: 312 RSQLVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRI 370
Query: 690 KASTTQQ-----LPPMLRAYGGNKECSGLGN-----------MFDSHI------------ 721
ST ++ LP ++ K CS +GN M DS +
Sbjct: 371 NKSTGEKTELAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKEET 430
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEH 779
HL H + W ++ LE++ +N IW S C+ S++ EH
Sbjct: 431 QHLKPIHLEYFSLWCLMLTLESQSKDNKRNYQHIWLMPASEMEESGSCIGSLI---RIEH 487
Query: 780 QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
K+ D +++++F R++ AIP + L +GD +ILS E L
Sbjct: 488 VKTVCDGQYLHNFQRKN----------------GAIPITN----LMAGDRIILSGEERTL 527
Query: 840 -AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYN 898
A++ G + EI+ V+ S RN S +S L +R+D++E N
Sbjct: 528 FALSRGYVKEINSTTVTCSLD-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGN 577
Query: 899 LVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
L +L + S +LR +I+D P+F S SV + + K LN QR+A+ KV
Sbjct: 578 LSKLMENTRASQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKV 637
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
L +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+
Sbjct: 638 LLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFL 697
Query: 1017 RIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKF 1071
R+G+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K F
Sbjct: 698 RLGQIQKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTF 756
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E+
Sbjct: 757 DFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQ 815
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----------- 1180
+ A+ L QYRM IM LSN L Y +L CGSD++ANA I + +
Sbjct: 816 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYAD 875
Query: 1181 -SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
S +PWL A P PV F+NT +PA E + ++N +EA L+ +T +K +
Sbjct: 876 YSENPWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPS 935
Query: 1240 DIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L SV VE++T+D+YQGRDK ++VSFVRS+E+
Sbjct: 936 DIGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNED--GTLGE 993
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +LS+ P L+ L+N + + I++
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLRKLLNHLNSEKLIID 1042
>gi|344274563|ref|XP_003409084.1| PREDICTED: DNA2-like helicase [Loxodonta africana]
Length = 1062
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 361/1010 (35%), Positives = 535/1010 (52%), Gaps = 121/1010 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + R+ +LI++PD+L+SGT VA S
Sbjct: 82 LRNDWCCVPVEPGDIIHL------EGDCASDTWIIDRDLGYLILYPDMLISGTSVANSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDLATRQMLIGTVLHEVFQKAISDSFAPEK-LQELAFQTVQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWI--ILFKDS------QDLNTPTVDFGSDGLKKLK 572
+Y + +++I + + E +P W + KD+ L+ P+ D ++ ++
Sbjct: 195 EMYRLNLTQDEIKQEVEEYLPSFSKWAGDFMRKDTSADFPQMQLSLPSDDSKNNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + TDIEE W+P++GLKG ID ++ VKI + E+ I+PLE KTGK N S+EH
Sbjct: 255 VIKSTDIEESIWSPRFGLKGKIDVTVGVKIH-RGCEMKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERR-PDPEAGLLLYLKTGQMYPVPAKHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ------LPPMLRAYGGNKECSGLGN--MFDSHI------------------- 721
K+ T ++ LP ++ Y K CS + N +F +
Sbjct: 370 SKSDTRKEKTQLAPLPQIIEDYQTCKYCSQMNNCALFSRAVEQQMDGNSVPIGMLPKITE 429
Query: 722 --YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASN 777
HL AH + W ++ LE KN IW S C+ +++
Sbjct: 430 ETQHLKLAHLEYFSLWCLMLTLETYSKDSRKNHQNIWLIPASEMEESGNCIGNLIRAG-- 487
Query: 778 EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD 837
H K+ D ++++ F R++ P N L +GD +ILS E
Sbjct: 488 -HVKTVCDGQYLHSFQRKNGAMPITN--------------------LMAGDRIILSGEER 526
Query: 838 RL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
L AV+ G + +I+ V+ L RN S +S L +R+D++E
Sbjct: 527 TLFAVSRGYVKKINTTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPL 576
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAII 954
NL +L + S +LR +I+D P+F S SV D K LN QR+A+
Sbjct: 577 GNLSKLMENTHASKKLRDLIIDFREPQFTSYLSSVLPHDAKDIVARILKGLNKPQRQAMK 636
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL +
Sbjct: 637 KVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKVG 696
Query: 1015 FVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
F+R+G+ + VH +IQK + +I S+ ++ D +VA TC+GI +P+ + K
Sbjct: 697 FLRLGQTQKVHPDIQKFTEEEVCRSKSIKSLALLEALYDSQLIVATTCMGINHPIFSRKI 756
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + PV LGPL ++ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 757 FDFCIVDEASQISQPVCLGPLFYSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 815
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN LIY +L CGSD++ANA I + +
Sbjct: 816 QNKNAVVQLTVQYRMNSKIMSLSNKLIYEGKLECGSDKVANAVINLPNFKNVKLELEFYA 875
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL+ P PV F+NT+ +PA E + ++N +EA LI +T +K
Sbjct: 876 DYSENPWLRGVFEPNNPVCFLNTNKVPAPEQVEKSGVSNIIEAKLIVFLTSHFIKAGCNP 935
Query: 1239 KDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
DIGII PY Q I L+ SS VE++T+DKYQGRDK ILVSFVRS N
Sbjct: 936 SDIGIIAPYRQQLKTINDLLARSSVGLVEVNTVDKYQGRDKSIILVSFVRS--NKDGDLG 993
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KL+++G +LS+ P L+ L+ + + I++
Sbjct: 994 ELLKDWRRLNVAITRAKHKLVLLGCVSSLSRYPPLERLLYHLNSEKLIID 1043
>gi|410975287|ref|XP_003994064.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2
[Felis catus]
Length = 1107
Score = 526 bits (1355), Expect = e-146, Method: Compositional matrix adjust.
Identities = 362/1006 (35%), Positives = 535/1006 (53%), Gaps = 113/1006 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 81 LRNDWCSLPVEPGDIIHLEGDCISDTWIID--EDFGYLILYPDILISGTSIASSIRCMRR 138
Query: 468 SVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + C+ + L+GT+LH++FQ + K L+EYA +Q K+++ +Y
Sbjct: 139 AVLSETFRSCNPATRQMLIGTVLHEVFQKAISNSFAPEK-LQEYAFQTIQEIKHLKEMYR 197
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLKK-----LKISEV 576
+N+++I + + E +P W F S D + SDG +++
Sbjct: 198 LNLNQDEIKQEVEEYLPSFSKWAGDFMHKYISTDFPQMQLSLPSDGSNNNSTCNIEVINS 257
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 258 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKELN---SIEHRSQL 313
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAS 692
+LYTLL ER ++GLL YL++ V + D L+ RN+ A N I K+S
Sbjct: 314 VLYTLLSQERRADP-EAGLLLYLKTGHMYPVPAKHLDKRELLRLRNQMAFSLSNRISKSS 372
Query: 693 TTQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI------------YH 723
++ LP ++ K CS +GN M DS + H
Sbjct: 373 VGKEKTNLAPLPQIIEEEQTCKYCSHVGNCALYSRAVEQQMDDSSVPIGMLPKIKEETQH 432
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
L +H + W ++ LE++ KN IW S C+ +++ E K
Sbjct: 433 LKLSHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMPASEMEESGNCIGNLI---RTERVK 489
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-A 840
+ D +++++F R++ P N L +GD VILS E L A
Sbjct: 490 TVCDGQYLHNFQRKNGAMPITN--------------------LMAGDRVILSGEERTLFA 529
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
++ G + EI+ V+ L RN S +S L +R+D++E NL
Sbjct: 530 LSRGYVKEINMTSVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLS 579
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
+L + S +LR +I+D P+F S SV D + K LN QR+A+ KVL
Sbjct: 580 KLMENTRVSQKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLL 639
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
+KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+
Sbjct: 640 SKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRL 699
Query: 1019 GRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVC 1074
G+ + VH +IQK + +I S+ +++ + ++VA TC+GI +P+ + K FD C
Sbjct: 700 GQTQKVHLDIQKFTEEEVCRSKSITSLALLEELYNSHRIVATTCMGINHPIFSRKTFDFC 759
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++
Sbjct: 760 IVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLVLNHEARALGMSESLFKRL-EQNKN 818
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC------------ 1182
A+ L QYRM IM LSN L Y +L CGSD++ANA I + + +
Sbjct: 819 AVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKAVKLELEFYADYSE 878
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+PW+ P PV F+NTD +PA E + ++N EA LI +T +K + DIG
Sbjct: 879 NPWMIGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSMFIKAGCKPTDIG 938
Query: 1243 IITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
II PY Q +I LS SS VE++T+DKYQGRDK ILV+FVRS N LL
Sbjct: 939 IIAPYRQQLKIINDLLSHSSIGMVEVNTVDKYQGRDKSIILVTFVRS--NKDGPLGELLR 996
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
DW R+NVA+TRAK KLI++G +L++ P L L++ + + I++
Sbjct: 997 DWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLNSEKLIMD 1042
>gi|329112570|ref|NP_001179731.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Bos taurus]
Length = 1061
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 361/1009 (35%), Positives = 539/1009 (53%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + + +LI++PD+L+SGT +A+S
Sbjct: 83 LRNDWCSVPVEPGDIIHL------EGDCISNTWIIDEDFGYLILYPDMLISGTSIASSIR 136
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 137 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAVSDSFAPEK-LQELASQTIQEIRHLK 195
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKK-----LK 572
+Y +N+++I + + E +P W F S D + SDG ++
Sbjct: 196 EMYRLKLNQDEIKQEVEEYLPSFSKWAGDFMHKHTSTDFPQMQLSLPSDGSNSNSTCNIE 255
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
++ DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 256 VTNSLDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEH 311
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---I 689
R+Q++LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I
Sbjct: 312 RSQLVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRI 370
Query: 690 KASTTQQ-----LPPMLRAYGGNKECSGLGN-----------MFDSHI------------ 721
ST ++ LP ++ K CS +GN M DS +
Sbjct: 371 NKSTGEKTELAPLPQIIEEQQTCKYCSQMGNCALYSRAVEQQMEDSSVPTSMWPKIKEET 430
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEH 779
HL H + W ++ LE++ +N IW S C+ S++ EH
Sbjct: 431 QHLKPIHLEYFSLWCLMLTLESQSKDNKRNYQHIWLMPASEMEESGSCIGSLI---RIEH 487
Query: 780 QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
K+ D +++++F R++ AIP + L +GD +ILS E L
Sbjct: 488 VKTVCDGQYLHNFQRKN----------------GAIPITN----LMAGDRIILSGEERTL 527
Query: 840 -AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYN 898
A++ G + EI+ V+ S RN S +S L +R+D++E N
Sbjct: 528 FALSRGYVKEINSTTVTCSLD-------RNLSGLPESTL---FRLDQEEKNCDIDTPLGN 577
Query: 899 LVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
L +L + S +LR +I+D P+F S SV + + K LN QR+A+ KV
Sbjct: 578 LSKLMENTRASQKLRDLIIDFREPQFISYLSSVLPHEAKDTVACILKGLNKPQRQAMKKV 637
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
L +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+
Sbjct: 638 LLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFL 697
Query: 1017 RIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKF 1071
R+G+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K F
Sbjct: 698 RLGQIQKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKTF 756
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E+
Sbjct: 757 DFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQ 815
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----------- 1180
+ A+ L QYRM IM LSN L Y +L CGSD++ANA I + +
Sbjct: 816 NKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLELEFYAD 875
Query: 1181 -SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
S +PWL A P PV F+NT +PA E + ++N +EA L+ +T +K +
Sbjct: 876 YSENPWLIAAFEPNNPVCFLNTHKVPAPEQVEKGGVSNIMEAKLVVFLTSVFIKAGCKPS 935
Query: 1240 DIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L SV VE++T+D+YQGRDK ++VSFVRS+E+
Sbjct: 936 DIGIIAPYRQQLKVISDLLAQSSVGMVEVNTVDRYQGRDKSIVVVSFVRSNED--GTLGE 993
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +LS+ P L L+N + + I++
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLGCVPSLSRYPPLGKLLNHLNSEKLIID 1042
>gi|255727572|ref|XP_002548712.1| hypothetical protein CTRG_03009 [Candida tropicalis MYA-3404]
gi|240134636|gb|EER34191.1| hypothetical protein CTRG_03009 [Candida tropicalis MYA-3404]
Length = 1420
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 334/975 (34%), Positives = 512/975 (52%), Gaps = 109/975 (11%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK---CSERSISALLGTLLHQIFQ 494
+ +N LI +PD+L+S T +A CPR++V+ R K S + I ++G ++H IFQ
Sbjct: 432 IDNSHNLLIWNPDILISATSIAQQVGCPRKTVILSRYKFPGVSSKPI--IVGEIVHYIFQ 489
Query: 495 AGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ 554
+ KE T F+ +L++ + +++A N +I +V+ + W +
Sbjct: 490 ECICKEKWTFDFMNNVLDELLKEYLLAIFAIEKNVEEIRDEVVKHFEYLETWFESYYKKP 549
Query: 555 DLNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING-M 612
N+ ++ S+ K I E DIEE +P +G+KG IDA++ + E N +NG
Sbjct: 550 FSNSSYIEEASEKNPIKFAIEEALDIEEEIKSPMFGIKGNIDATVTARFEG--NGVNGKF 607
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++P+E KTGK S M H AQ LY LL +RY I S LL Y + TQ ++ S
Sbjct: 608 MVPMEIKTGK-----SYMYHNAQASLYALLFQDRYDFLIKSYLLVYTKEKVTQKCNIRIS 662
Query: 673 DLVGLIMRRNEFANDIIKASTTQQLPPMLR-------------------AYGGNKECSGL 713
DL LI+ RN+ + I + LPP+++ G KE SG+
Sbjct: 663 DLRSLIILRNKLSQYI---KSNIGLPPLVKNSECDRCNIRSECMTLNHLVEEGTKEESGI 719
Query: 714 G---------NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHF 764
G ++FD+ +Y + WD LI E +W G+
Sbjct: 720 GEDEYEAITKDIFDNDVYR------DYFVFWDHLIACEEDFSSRTVKHLWTMTGAERQDQ 773
Query: 765 TGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMP-SPNLNASDGDSLIGAAIPTKDMDCT 823
C + + SN+ + N F+Y +H SP + K++
Sbjct: 774 GKCFDRMKIVQSNDKET----NTFLYAIRHRHKSDSPQFEYTFEKE------EGKEVRDL 823
Query: 824 LRS----GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPG-------- 866
LRS GD VI+S E+ + A+ +G I +SR ++++ + + +L
Sbjct: 824 LRSQLNVGDKVIISDEAGQFAITTGSIARLSRSAITINTRRRILTSDNKLKNYNNSNNQV 883
Query: 867 -----RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEA 921
R S S A S + +RIDKDE+ + RYN++ LFL +++ RRM+VD E
Sbjct: 884 FQSVIRQSQSKAKSGGQKTFRIDKDEMFYGLGLARYNVLNLFLPKG-AAKTRRMVVDYEK 942
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
P + F I ++ N DQ A+ KV + DYALILGMPGTGKT+ + +
Sbjct: 943 PTYKDKPEFK-------IPDKQKFNSDQIAAMEKVFSTNDYALILGMPGTGKTTVIAELI 995
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSV 1041
+ ++ G S+LLTSYTNSAVDN+L+KLK +DF+R+G VHK+I + +I +
Sbjct: 996 RIMVSEGMSVLLTSYTNSAVDNILLKLKDLGVDFLRVGYPSRVHKDIHPYIPDNKHIKTY 1055
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
+ + KVVA TCLGIT+P + FD+CI+DEA Q LP++LGPL F+ +FV+V
Sbjct: 1056 NQYFDTYNSPKVVATTCLGITDPCFNLRGSFDICIVDEASQIALPINLGPLSFSKRFVMV 1115
Query: 1101 GDHYQLPPLVQ-STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
GDH QLPPLV+ +++ + + SLF++LS HP+++ L QYRMCQ IME+SN LIYG
Sbjct: 1116 GDHNQLPPLVKHPSQSVKQALSQSLFKKLSTIHPESLVELTYQYRMCQDIMEVSNILIYG 1175
Query: 1160 DRLSCGSDEIANAKIKV------------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
RL CGS+E+A + + L+ S W++ P V+F++ D LPA
Sbjct: 1176 QRLKCGSEEVAKRSLVIPHPGVLKTLQYDKSLARESRWMETVFEPSNKVLFLDHDNLPAL 1235
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIH 1266
E ++ N +EA L+ ++ LV+ +E IG+++ Y SQ L++ +LS+ +E+
Sbjct: 1236 EEARGDSIKNYIEAMLVEQVVGALVEAGVEESQIGVMSVYRSQVLLLKRNLSLRKDIEVL 1295
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T D++QGRDK+CI++S V+S+EN N LL DW R+NVA+TRAK KLI++GS TLS
Sbjct: 1296 TADQFQGRDKECIIISLVKSNEN--NNPGELLKDWRRLNVAITRAKSKLIILGSRSTLSA 1353
Query: 1327 VPLLKLLINKVGEQS 1341
K I + E++
Sbjct: 1354 TETTKTFIEFLEEKN 1368
>gi|395501406|ref|XP_003755086.1| PREDICTED: DNA2-like helicase [Sarcophilus harrisii]
Length = 1054
Score = 523 bits (1348), Expect = e-145, Method: Compositional matrix adjust.
Identities = 357/1038 (34%), Positives = 543/1038 (52%), Gaps = 130/1038 (12%)
Query: 386 DAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+ ++P K L + QS E++ + L DW + PGD +++ GE+ + ++ +
Sbjct: 55 NEENPEKHLIITASQSLEDQELCILRNDWNDLSVEPGDIIHLEGEYKTDAWI-IDKDFGY 113
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPT 503
L +HPD+L+SGT VA S C RR+VL E+ + C S L+GT+LH+IFQ ++
Sbjct: 114 LTLHPDMLISGTSVANSIRCMRRAVLSEKFRSCDPNSHQMLIGTVLHEIFQKAIIDSFAE 173
Query: 504 MKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP-T 560
K L+E A +Q K+++ +Y + +++ + + + +P W F ++ P
Sbjct: 174 KK-LQELALQTVQEIKHLKEMYHLKLKQDEFQQEIEDYLPSFSKWAEDF-----MHKPMA 227
Query: 561 VDFGSDGLKKLK------------ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
VDF L LK ++E DIEE W+P++GLKG ID ++ VKI + +E
Sbjct: 228 VDFPKMPLTSLKDRNKNDSSCRIQVTEALDIEENIWSPRFGLKGKIDVTVNVKIH-RGSE 286
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
I+PLE KTGK N S+EHR+QV+LYTLL ER ++G L YLQ+ V
Sbjct: 287 ATCRIMPLELKTGKESN---SIEHRSQVVLYTLLSQERRADP-EAGWLLYLQTGNMYPVP 342
Query: 669 VQRSDLVGLIMRRNE----FANDIIKASTTQ------QLPPMLRAYGGNKECSGLGNMFD 718
D L+ RN+ AN + K++ + QLPP++ K CS M++
Sbjct: 343 ANHLDRRELLKLRNQMAFYLANGVRKSTAGKEQSQLAQLPPIVNDSYTCKYCS---QMYN 399
Query: 719 SHIY--------------------------HLTTAHCSFLRHWDRLIDLEA--KEMQVVK 750
+Y HL +H + W ++ LE+ K+ +
Sbjct: 400 CALYSRAVEQQMDKSFIPLAMLPKIEKATQHLKHSHLQYFSLWYLMMTLESQSKDNKRSH 459
Query: 751 NEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSL 810
IW S C+ +++ E ++ ++++ F R++ PN N
Sbjct: 460 RNIWLMSASEREKNGDCIGNLI---RTEDVQTICSGQYLHSFQRKNGIIPNTN------- 509
Query: 811 IGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPL-RLPGRN 868
L +GD V+LS E +L A+ G + EI+ V+ + L +LP
Sbjct: 510 -------------LMAGDRVVLSGEERKLLALTCGYVKEINMTSVTCVLDRNLSKLPKST 556
Query: 869 SSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS-- 926
++R+D +E + NL +L + S +LR +I+D P+F
Sbjct: 557 -----------LFRLDYEERIGGIETPLGNLSKLMENTPASEKLRDLIIDFREPQFIEYL 605
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
SV + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L
Sbjct: 606 SSVLPHEAKDRVANILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICALVRILYA 665
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM----NINSVE 1042
G S+LLTSYT+SAVDN+L+KLK + F+R+G+ + VH IQK + +I S+
Sbjct: 666 CGFSVLLTSYTHSAVDNILLKLKKFKVGFLRLGQIQKVHPGIQKFTEEEICRENSIKSLT 725
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
+++ + +VA TC+GI +P+ + ++FD CI+DEA Q + P LGPL F+S+FVLVGD
Sbjct: 726 SLEELYNSQPIVATTCMGINHPIFSRRRFDFCIVDEASQISQPACLGPLFFSSRFVLVGD 785
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
H QLPPLV ++EAR GM SLF+RL E+ A+ L QYRM +M LSN L+Y +L
Sbjct: 786 HLQLPPLVLNSEARGLGMSESLFKRL-EQKQNAVVQLTVQYRMNSTVMSLSNKLVYEGKL 844
Query: 1163 SCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
CGSD++ANA + + L S + WL+ A P PV F+NT+ +PA E
Sbjct: 845 ECGSDKVANATVNLPHLKDVMLDLQAHGIDSENSWLRGAFEPKNPVCFLNTEKIPAPEQA 904
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHT 1267
+ ++N EA LI + +K DIG+I PY Q +I L SVS+VE++T
Sbjct: 905 EKCGVSNITEAKLIVFLASVFIKAGCNPSDIGVIAPYRQQLKIITDLLTHFSVSTVEVNT 964
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+DKYQGRDK ILVSFVRS N LL DW R+NVA+TRAK KL+++G +LS+
Sbjct: 965 VDKYQGRDKSIILVSFVRS--NKDGTLGELLKDWRRLNVAITRAKHKLVLLGCVPSLSRY 1022
Query: 1328 PLLKLLINKVGEQSGILN 1345
P ++ L+ + ++ I +
Sbjct: 1023 PPVEKLLCYLKSENKIFD 1040
>gi|383416283|gb|AFH31355.1| DNA2-like helicase [Macaca mulatta]
Length = 1061
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 357/1010 (35%), Positives = 531/1010 (52%), Gaps = 122/1010 (12%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 82 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDILISGTSIASSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 195 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNASTDFPQMQLSLPSDSSKDNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 255 VVKSMDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 370 SKSATRQKTQLASLPQIIEEEKTCKYCSQMGNCALYSRAVEQQMDGSSVPIVMLPKIEEE 429
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ ++ E
Sbjct: 430 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGHLI---RTE 486
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K+ D +++++F R+H AIP + L +GD VI+S E
Sbjct: 487 HVKTICDGQYLHNFQRKH----------------GAIPVTN----LLAGDRVIVSGEERS 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S+L +R+D++E
Sbjct: 527 LFALSRGYVKEINTTTVTC-------LLDRNLSVLPESIL---FRLDQEEKSCDIETPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFTSYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY L++GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLVVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQTQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 756 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 814
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
+ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 815 QSKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPHFKDVKLDLEFYA 874
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA +I +T +K
Sbjct: 875 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKVIVFLTSIFIKAGCSP 934
Query: 1239 KDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 935 SDIGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVG 992
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1042
>gi|402880646|ref|XP_003903909.1| PREDICTED: DNA2-like helicase [Papio anubis]
Length = 1061
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 357/1010 (35%), Positives = 532/1010 (52%), Gaps = 122/1010 (12%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 82 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDILISGTSIASSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 195 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNASTDFPQMQLSLPSDSSKDNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 255 VVKSMDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 370 SKSATRQKTQLASLPQIIEEEKTCKYCSQMGNCALYSRAVEQQMDGSSVPIVMLPKIEEE 429
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ ++ E
Sbjct: 430 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGHLI---RTE 486
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K+ D +++++F R+H AIP + L +GD VI+S E
Sbjct: 487 HVKTICDGQYLHNFQRKH----------------GAIPVTN----LLAGDRVIVSGEERS 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ ++ L RN S +S+L +R+D++E
Sbjct: 527 LFALSRGYVKEINTTTITC-------LLDRNLSVLPESIL---FRLDQEEKSCDIETPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFTSYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY L++GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLVVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQTQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 756 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 814
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
+ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 815 QSKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPHFKDVKLDLEFYA 874
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA +I +T +K
Sbjct: 875 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKVIVFLTSIFIKAGCSP 934
Query: 1239 KDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
DIGII PY Q +I L+ SS VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 935 SDIGIIAPYRQQLKIINDLLARSSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVG 992
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 993 ELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1042
>gi|432106707|gb|ELK32359.1| DNA2-like helicase [Myotis davidii]
Length = 1054
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 361/1000 (36%), Positives = 529/1000 (52%), Gaps = 123/1000 (12%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + + +LI++PD+L+SGT VA+S
Sbjct: 81 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDEDFGYLILYPDMLISGTSVASSIR 134
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 135 CLRRAVLSETFRGSDPATRQMLIGTVLHEVFQKAISDSFAPEK-LQELAFQTVQEIRHLK 193
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLKK-----LK 572
+Y +N++++ + + E +P W F S D + SDG ++
Sbjct: 194 EMYRLNLNQDEVKQEVEEYLPSFSKWAGDFMQKYTSTDFPQMQLSLPSDGSNNNAACNIE 253
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 254 VIKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEH 309
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+Q++LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + I
Sbjct: 310 RSQLVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPAKHLDKRELLKLRNQMAFSLFHRI 368
Query: 689 IKASTTQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI---------- 721
K +T ++ LP ++ K CS +GN + DS +
Sbjct: 369 SKPATEKEKTELTPLPQIIEEQQTCKYCSQVGNCALYSRAVEQQVDDSSVPMGMLPKIKE 428
Query: 722 --YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASN 777
HL H + W ++ LE+K KN IW + S C+ +++
Sbjct: 429 ETQHLKATHLEYFSLWCLMLTLESKSKDNKKNNQNIWLTSSSEMEQSGNCIGNLI---RT 485
Query: 778 EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD 837
EH K+ D +++++F R++ P N L +GD +ILS E
Sbjct: 486 EHIKTLCDGQYLHNFQRKNGAMPVTN--------------------LMAGDRIILSGEER 525
Query: 838 RL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 526 TLFALSRGYVKEINAATVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPL 575
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAII 954
NL +L + S +LR +I+D P+F S S+ D + K LN QR+A+
Sbjct: 576 GNLSKLMKNTDASQKLRDLIIDFREPQFISYLSSILPHDAKDTVASILKGLNKPQRQAMK 635
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I
Sbjct: 636 KVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIG 695
Query: 1015 FVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDK 1069
F+R+G+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 696 FLRLGQTQKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSHLIVATTCMGINHPIFSRK 754
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL
Sbjct: 755 VFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL- 813
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS--------- 1180
E + A+ L QYRM IM LSN L Y +L CGSD++A+A I + +
Sbjct: 814 ERNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVINLPNFKDVKLELEFY 873
Query: 1181 ---SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S +PWL A P PV F+NTD +PA E + ++N EA LI +T +K
Sbjct: 874 ADYSENPWLIGAFEPNNPVCFLNTDQVPAPEQVEKNGVSNITEAKLIVFLTSIFIKAGCN 933
Query: 1238 GKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q +I L SV VE++T+DKYQGRDK ILVSFVRS N
Sbjct: 934 PSDIGIIAPYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIILVSFVRS--NKDGTL 991
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LL DW R+NVA+TRAK KLI++G +L++ P L L+
Sbjct: 992 GELLKDWRRLNVAITRAKHKLILLGCVSSLNRYPPLGKLL 1031
>gi|392355327|ref|XP_241671.6| PREDICTED: DNA2-like helicase [Rattus norvegicus]
Length = 1059
Score = 521 bits (1342), Expect = e-144, Method: Compositional matrix adjust.
Identities = 359/1011 (35%), Positives = 536/1011 (53%), Gaps = 108/1011 (10%)
Query: 400 QSGEERAVHLWED-WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRV 458
Q GE+ + + + W + PGD +++ G+ + V + + I+ PD+L+SGT V
Sbjct: 73 QEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWI-VDDDFGYFILSPDMLISGTSV 131
Query: 459 AASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ- 516
A+S C RR+VL E + S+ + L+GT+LH++FQ + + K L+E A L+
Sbjct: 132 ASSIRCLRRAVLSETFRVSDTATRQMLIGTILHEVFQKAISESFAPEK-LQELALQTLRE 190
Query: 517 -KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD--------SQDLNTPTVDFGSDG 567
++++ +Y ++++++ + E +P W F L+ P+
Sbjct: 191 VRHLKEMYRLNLSQDEVRCEVEEYLPSFSKWADEFMHKGTKAEFPQMHLSLPSDSSDRSS 250
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N
Sbjct: 251 PCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKTKYKIMPLELKTGKESN-- 307
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
S+EHR QVILYTLL ER + ++G L YL++ Q V D L+ RN+ A
Sbjct: 308 -SIEHRGQVILYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNQLAFS 365
Query: 688 II----KASTTQQ-----LPPMLRAYGGNKECSGLGN----------MFDSHI------- 721
++ +A+ ++ LP ++ K CS +GN + D+ I
Sbjct: 366 LLHRVSRAAAGEEARLLALPQIIEEEKTCKYCSQMGNCALYSRAVEQVHDTSIPEGMRSK 425
Query: 722 -----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLD 774
HLT AH + W ++ LE++ K+ IW + S C+ S+V
Sbjct: 426 IQEGTQHLTRAHLKYFSLWCLMLTLESQSKDTKKSHQSIWLTPASKLEESGNCIGSLV-- 483
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
E K D ++++F R++ P P N L +GD +ILS
Sbjct: 484 -RTEPVKRVCDGHYLHNFQRKNGPMPATN--------------------LMAGDRIILSG 522
Query: 835 ESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
E +L A++ G + I V+ L RN S+ ++ L +R+D++E +
Sbjct: 523 EERKLFALSKGYVKRIDTAAVTC-------LLDRNLSTLPETTL---FRLDREEKHGDIN 572
Query: 894 VMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRR 951
NL +L + S +LR +I+D + P+F + SV D + K LN QR+
Sbjct: 573 TPLGNLSKLMENTDSSKRLRELIIDFKEPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQ 632
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL
Sbjct: 633 AMKKVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKF 692
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
I F+R+G+ VH +IQK M +I S+ +++ + VVA TC+GI++P+ +
Sbjct: 693 KIGFLRLGQSHKVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMFS 752
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+R
Sbjct: 753 RKTFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHKQLPPLVLNREARALGMSESLFKR 812
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------- 1180
L E + A+ L QYRM + IM LSN L Y +L CGSD +ANA I + +L
Sbjct: 813 L-ERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 1181 ---SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S +PWL P PV F+NTD +PA E ++ ++N EA LI +T +K
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCS 931
Query: 1238 GKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q I L SV VE++T+DKYQGRDK ILVSFVRS+E+
Sbjct: 932 PSDIGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNED--GTL 989
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++GS +L + P L+ L + + + I N
Sbjct: 990 GELLKDWRRLNVAITRAKHKLILLGSVSSLKRFPPLEKLFDHLNAEQLIRN 1040
>gi|380476222|emb|CCF44832.1| DNA replication ATP-dependent helicase dna2 [Colletotrichum
higginsianum]
Length = 856
Score = 521 bits (1342), Expect = e-144, Method: Compositional matrix adjust.
Identities = 315/857 (36%), Positives = 477/857 (55%), Gaps = 117/857 (13%)
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+S++ D+EE W+P YGLKG IDA+++V + ++ + + +P E KTGK N H
Sbjct: 3 VSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDGKD-VKTLTVPFEVKTGKHANSN----H 57
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAS 692
AQ LY LL+S+RY +I G+LYY+++ QT + R +L +IM+RN+ A I + S
Sbjct: 58 MAQTALYNLLLSDRYDLNIVYGILYYMETSQTMRIPTIRHELRHMIMQRNQLACHIRERS 117
Query: 693 TTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTAHCSFL 732
QLP M R A GG+ E SG+ FD + HLT H F
Sbjct: 118 V--QLPSMKRSKNMCGKCYAKTSCFIYHKLADGGDGETSGMDKGFDEVVKHLTPKHQEFF 175
Query: 733 RHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRFVY 790
W+ L+ E KE Q +K E+W C S ++++ + E + + NRF Y
Sbjct: 176 LKWENLLTKEEKETQKLKRELWTMVSQDREKVGRCFSDVIIEEGSWSEALGTSKINRFSY 235
Query: 791 HFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEIS 850
FV++ P+P+ + ++ L G+ +++S E A+A G +T +
Sbjct: 236 TFVKR-APNPSHSF---------------LESQLAVGEPIVVSDEQGHFALALGYVTSVR 279
Query: 851 RFHVSVSFSKPL-----RLPGRNSSSD---------------ADSLLHEV------WRID 884
+ ++V+ + L + PG + S + AD ++ +R+D
Sbjct: 280 KQRITVAVDRRLHNARIKQPGFDESDNQVFASIMEVVPEGCTADQSQGKIKQAPIRYRLD 339
Query: 885 KDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
KDE + +R NLVQ + S ++RR +VDL PRF + P + +
Sbjct: 340 KDEFSNGMATVRNNLVQTMAEGVFGSREIRRAVVDLVPPRFKTA------PTQYVVADRQ 393
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN DQ RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL+ +G S+LLTSYT++AVDN
Sbjct: 394 SLNVDQHRAIEKVMSAEDYALVLGMPGTGKTTTIAHIIRALVSQGKSVLLTSYTHTAVDN 453
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
+L+KLK+ +R+G VH E+Q+ L+ +NS E+IK+ +VA TCLG+
Sbjct: 454 ILLKLKNDKTPVLRLGAPAKVHPEVQQFAILAGQPMNSFEQIKEAWHDTPIVATTCLGVG 513
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ L ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLPPLVQ+ EARE G+++
Sbjct: 514 HALFNERTFDYCIVDEASQITLPICLGPIRMAKTFVLVGDHNQLPPLVQNEEAREGGLDV 573
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS- 1181
SLF+ LS+ HP ++ L+ QYRMC+ IM LSN LIY RL CG++E+ K+ V ++++
Sbjct: 574 SLFKLLSDTHPDSVVNLEHQYRMCEDIMTLSNTLIYHGRLRCGTEELRFKKLDVPNMNAI 633
Query: 1182 -------------------CSP------WLKEALNPCRPVIFVNTDMLPAY---EAKDHQ 1213
C+ WL++ ++ V FVNTD L EAK ++
Sbjct: 634 KNLHYDSTSMLRLGTSKPFCTSMAESCCWLRDLIDSEARVRFVNTDTLQPLTREEAKGNR 693
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-SVEIHTIDKYQ 1272
+ NP EA ++ ++ + L+ + +IG++T Y SQ +L++H L VE+HT D++Q
Sbjct: 694 IV-NPAEARIVVQLVESLLTVGVPDGEIGVMTHYRSQLSLLKHGLRGHVGVEMHTADRFQ 752
Query: 1273 GRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL---SKVP 1328
GRDKD +++S VRS+E NC+ LL DW RINVA TRAK KL+++GS TL K
Sbjct: 753 GRDKDVVILSLVRSNE---NCSIGELLKDWRRINVAFTRAKTKLLVIGSKNTLKGSGKAE 809
Query: 1329 LLKLLINKVGEQSGILN 1345
+L I + E+ I +
Sbjct: 810 MLSKFIGLMEERDWIYD 826
>gi|408407614|sp|D3ZG52.1|DNA2_RAT RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1059
Score = 521 bits (1341), Expect = e-144, Method: Compositional matrix adjust.
Identities = 359/1011 (35%), Positives = 536/1011 (53%), Gaps = 108/1011 (10%)
Query: 400 QSGEERAVHLWED-WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRV 458
Q GE+ + + + W + PGD +++ G+ + V + + I+ PD+L+SGT V
Sbjct: 73 QEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWI-VDDDFGYFILSPDMLISGTSV 131
Query: 459 AASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ- 516
A+S C RR+VL E + S+ + L+GT+LH++FQ + + K L+E A L+
Sbjct: 132 ASSIRCLRRAVLSETFRVSDTATRQMLIGTILHEVFQKAISESFAPEK-LQELALQTLRE 190
Query: 517 -KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS--------QDLNTPTVDFGSDG 567
++++ +Y ++++++ + E +P W F L+ P+
Sbjct: 191 VRHLKEMYRLNLSQDEVRCEVEEYLPSFSKWADEFMHKGTKAEFPQMHLSLPSDSSDRSS 250
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N
Sbjct: 251 PCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKTKYKIMPLELKTGKESN-- 307
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
S+EHR QVILYTLL ER + ++G L YL++ Q V D L+ RN+ A
Sbjct: 308 -SIEHRGQVILYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNQLAFS 365
Query: 688 II----KASTTQQ-----LPPMLRAYGGNKECSGLGN----------MFDSHI------- 721
++ +A+ ++ LP ++ K CS +GN + D+ I
Sbjct: 366 LLHRVSRAAAGEEARLLALPQIIEEEKTCKYCSQMGNCALYSRAVEQVHDTSIPEGMRSK 425
Query: 722 -----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLD 774
HLT AH + W ++ LE++ K+ IW + S C+ S+V
Sbjct: 426 IQEGTQHLTRAHLKYFSLWCLMLTLESQSKDTKKSHQSIWLTPASKLEESGNCIGSLV-- 483
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
E K D ++++F R++ P P N L +GD +ILS
Sbjct: 484 -RTEPVKRVCDGHYLHNFQRKNGPMPATN--------------------LMAGDRIILSG 522
Query: 835 ESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
E +L A++ G + I V+ L RN S+ ++ L +R+D++E +
Sbjct: 523 EERKLFALSKGYVKRIDTAAVTC-------LLDRNLSTLPETTL---FRLDREEKHGDIN 572
Query: 894 VMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRR 951
NL +L + S +LR +I+D + P+F + SV D + K LN QR+
Sbjct: 573 TPLGNLSKLMENTDSSKRLRELIIDFKEPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQ 632
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL
Sbjct: 633 AMKKVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKF 692
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
I F+R+G+ VH +IQK M +I S+ +++ + VVA TC+GI++P+ +
Sbjct: 693 KIGFLRLGQSHKVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMFS 752
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+R
Sbjct: 753 RKTFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHKQLPPLVLNREARALGMSESLFKR 812
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------- 1180
L E + A+ L QYRM + IM LSN L Y +L CGSD +ANA I + +L
Sbjct: 813 L-ERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 1181 ---SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S +PWL P PV F+NTD +PA E ++ ++N EA LI +T +K
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCS 931
Query: 1238 GKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q I L SV VE++T+DKYQGRDK ILVSFVRS+E+
Sbjct: 932 PSDIGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNED--GTL 989
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++GS +L + P L+ L + + + I N
Sbjct: 990 GELLKDWRRLNVAITRAKHKLILLGSVSSLKRFPPLEKLFDHLNAEQLISN 1040
>gi|392338371|ref|XP_002725876.2| PREDICTED: DNA2-like helicase [Rattus norvegicus]
Length = 1059
Score = 520 bits (1340), Expect = e-144, Method: Compositional matrix adjust.
Identities = 359/1011 (35%), Positives = 536/1011 (53%), Gaps = 108/1011 (10%)
Query: 400 QSGEERAVHLWED-WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRV 458
Q GE+ + + + W + PGD +++ G+ + V + + I+ PD+L+SGT V
Sbjct: 73 QEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWI-VDDDFGYFILSPDMLISGTSV 131
Query: 459 AASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ- 516
A+S C RR+VL E + S+ + L+GT+LH++FQ + + K L+E A L+
Sbjct: 132 ASSIRCLRRAVLSETFRVSDTATRQMLIGTILHEVFQKAISESFAPEK-LQELALQTLRE 190
Query: 517 -KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS--------QDLNTPTVDFGSDG 567
++++ +Y ++++++ + E +P W F L+ P+
Sbjct: 191 VRHLKEMYRLNLSQDEVRCEVEEYLPSFSKWADEFMHKGTKAEFPQMHLSLPSDSSDRSS 250
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N
Sbjct: 251 PCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKTKYKIMPLELKTGKESN-- 307
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
S+EHR QVILYTLL ER + ++G L YL++ Q V D L+ RN+ A
Sbjct: 308 -SIEHRGQVILYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNQLAFS 365
Query: 688 II----KASTTQQ-----LPPMLRAYGGNKECSGLGN----------MFDSHI------- 721
++ +A+ ++ LP ++ K CS +GN + D+ I
Sbjct: 366 LLHRVSRAAAGEEARLLALPQIIEEEKTCKYCSQMGNCALYSRAVEQVHDTSIPEGMRSK 425
Query: 722 -----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLD 774
HLT AH + W ++ LE++ K+ IW + S C+ S+V
Sbjct: 426 IQEGTQHLTRAHLKYFSLWCLMLMLESQSKDTKKSHQSIWLTPASKLEESGNCIGSLV-- 483
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
E K D ++++F R++ P P N L +GD +ILS
Sbjct: 484 -RTEPVKRVCDGHYLHNFQRKNGPMPATN--------------------LMAGDRIILSG 522
Query: 835 ESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
E +L A++ G + I V+ L RN S+ ++ L +R+D++E +
Sbjct: 523 EERKLFALSKGYVKRIDTAAVTC-------LLDRNLSTLPETTL---FRLDREEKHGDIN 572
Query: 894 VMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRR 951
NL +L + S +LR +I+D + P+F + SV D + K LN QR+
Sbjct: 573 TPLGNLSKLMENTDSSKRLRELIIDFKEPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQ 632
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL
Sbjct: 633 AMKKVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKF 692
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
I F+R+G+ VH +IQK M +I S+ +++ + VVA TC+GI++P+ +
Sbjct: 693 KIGFLRLGQSHKVHPDIQKFTEEEMCRLRSIASLAHLEELYNSHPVVATTCMGISHPMFS 752
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+R
Sbjct: 753 RKTFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHKQLPPLVLNREARALGMSESLFKR 812
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------- 1180
L E + A+ L QYRM + IM LSN L Y +L CGSD +ANA I + +L
Sbjct: 813 L-ERNESAVVQLTIQYRMNRKIMSLSNKLTYEGKLECGSDRVANAVITLPNLKDVRLEFY 871
Query: 1181 ---SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S +PWL P PV F+NTD +PA E ++ ++N EA LI +T +K
Sbjct: 872 ADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQIENGGVSNVTEARLIVFLTSTFIKAGCS 931
Query: 1238 GKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIGII PY Q I L SV VE++T+DKYQGRDK ILVSFVRS+E+
Sbjct: 932 PSDIGIIAPYRQQLRTITDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNED--GTL 989
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++GS +L + P L+ L + + + I N
Sbjct: 990 GELLKDWRRLNVAITRAKHKLILLGSVSSLKRFPPLEKLFDHLNAEQLIRN 1040
>gi|283837769|ref|NP_796346.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Mus musculus]
gi|119368660|sp|Q6ZQJ5.2|DNA2_MOUSE RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1062
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 353/1030 (34%), Positives = 538/1030 (52%), Gaps = 126/1030 (12%)
Query: 398 NEQSGEERAVH--------------LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
NE+ EE+ +H L W + PGD V++ G+ + + +
Sbjct: 58 NERGAEEKRLHVTASQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWI-IDDDFG 116
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIP 502
+ I++PD+++SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + +
Sbjct: 117 YFILYPDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFA 176
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLN 557
+ L+E A L+ ++++ +Y +++++I + E +P W F S +
Sbjct: 177 PER-LQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLPSFSKWAEDFMRKGPSSEFP 235
Query: 558 TPTVDFGSDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ SDG + +++ + DIEE W+P++GLKG ID ++ VKI + ++
Sbjct: 236 QMQLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKMKYK 294
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTGK N S+EHR+QV+LYTLL ER + ++G L YL++ Q V
Sbjct: 295 VMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHL 350
Query: 673 DLVGLIMRRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGNM------- 716
D L+ RN A ++ +A+ ++ LP ++ K CS +GN
Sbjct: 351 DKRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAV 410
Query: 717 ----------------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRG 758
HL AH + W ++ LE+ K+ + IW +
Sbjct: 411 EEQGDDASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPA 470
Query: 759 SGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
S C+ ++V E D +++++F R++ P P N
Sbjct: 471 SELEESGNCVGNLV---RTEPVSRVCDGQYLHNFQRKNGPMPATN--------------- 512
Query: 819 DMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR-LPGRNSSSDADSL 876
L +GD +ILS E +L A++ G + ++++ V+ + L LP
Sbjct: 513 -----LMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNLSTLPATT-------- 559
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDP 934
V+R+D++E S NL +L + S +LR +I+D P+F + SV D
Sbjct: 560 ---VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDA 616
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
+ K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLT
Sbjct: 617 KDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLT 676
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQ 1050
SYT+SAVDN+L+KL + F+R+G+ VH +IQK + +I S+ +++ +
Sbjct: 677 SYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNS 736
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV
Sbjct: 737 HPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLV 796
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y +L CGSD +A
Sbjct: 797 VNREARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVA 855
Query: 1171 NAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
NA + + +L S SPWL L P PV F+NTD +PA E ++ ++N
Sbjct: 856 NAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNV 915
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRD 1275
EA LI +T +K DIG+I PY Q +I L SV VE++T+DKYQGRD
Sbjct: 916 TEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRD 975
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K ILVSFVRS+E+ LL DW R+NVALTRAK KLI++GS +L + P L L +
Sbjct: 976 KSLILVSFVRSNED--GTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFD 1033
Query: 1336 KVGEQSGILN 1345
+ + IL+
Sbjct: 1034 HLNAEQLILD 1043
>gi|37359766|dbj|BAC97861.1| mKIAA0083 protein [Mus musculus]
Length = 1078
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 353/1030 (34%), Positives = 538/1030 (52%), Gaps = 126/1030 (12%)
Query: 398 NEQSGEERAVH--------------LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
NE+ EE+ +H L W + PGD V++ G+ + + +
Sbjct: 74 NERGAEEKRLHVTASQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWI-IDDDFG 132
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIP 502
+ I++PD+++SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + +
Sbjct: 133 YFILYPDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFA 192
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLN 557
+ L+E A L+ ++++ +Y +++++I + E +P W F S +
Sbjct: 193 PER-LQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLPSFSKWAEDFMRKGPSSEFP 251
Query: 558 TPTVDFGSDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ SDG + +++ + DIEE W+P++GLKG ID ++ VKI + ++
Sbjct: 252 QMQLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKMKYK 310
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTGK N S+EHR+QV+LYTLL ER + ++G L YL++ Q V
Sbjct: 311 VMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHL 366
Query: 673 DLVGLIMRRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGNM------- 716
D L+ RN A ++ +A+ ++ LP ++ K CS +GN
Sbjct: 367 DKRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAV 426
Query: 717 ----------------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRG 758
HL AH + W ++ LE+ K+ + IW +
Sbjct: 427 EEQGDDASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPA 486
Query: 759 SGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
S C+ ++V E D +++++F R++ P P N
Sbjct: 487 SELEESGNCVGNLV---RTEPVSRVCDGQYLHNFQRKNGPMPATN--------------- 528
Query: 819 DMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR-LPGRNSSSDADSL 876
L +GD +ILS E +L A++ G + ++++ V+ + L LP
Sbjct: 529 -----LMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNLSTLPATT-------- 575
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDP 934
V+R+D++E S NL +L + S +LR +I+D P+F + SV D
Sbjct: 576 ---VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDA 632
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
+ K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLT
Sbjct: 633 KDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLT 692
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQ 1050
SYT+SAVDN+L+KL + F+R+G+ VH +IQK + +I S+ +++ +
Sbjct: 693 SYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNS 752
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV
Sbjct: 753 HPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLV 812
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y +L CGSD +A
Sbjct: 813 VNREARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVA 871
Query: 1171 NAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
NA + + +L S SPWL L P PV F+NTD +PA E ++ ++N
Sbjct: 872 NAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNV 931
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRD 1275
EA LI +T +K DIG+I PY Q +I L SV VE++T+DKYQGRD
Sbjct: 932 TEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRD 991
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K ILVSFVRS+E+ LL DW R+NVALTRAK KLI++GS +L + P L L +
Sbjct: 992 KSLILVSFVRSNED--GTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFD 1049
Query: 1336 KVGEQSGILN 1345
+ + IL+
Sbjct: 1050 HLNAEQLILD 1059
>gi|1531548|dbj|BAA07647.1| KIAA0083 [Homo sapiens]
Length = 1077
Score = 518 bits (1333), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 530/1009 (52%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 99 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDMLISGTSIASSIR 152
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 153 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 211
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 212 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 271
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 272 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 327
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 328 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 386
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 387 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEE 446
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 447 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 503
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 504 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 543
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 544 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 593
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 594 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 653
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 654 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 713
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 714 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 772
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 773 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 831
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 832 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYA 891
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 892 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 951
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 952 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 1009
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 1010 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1058
>gi|320461728|ref|NP_001073918.2| DNA replication ATP-dependent helicase/nuclease DNA2 [Homo sapiens]
gi|119370373|sp|P51530.3|DNA2_HUMAN RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
Short=hDNA2; AltName: Full=DNA replication ATP-dependent
helicase-like homolog; Includes: RecName: Full=DNA
replication nuclease DNA2; Includes: RecName: Full=DNA
replication ATP-dependent helicase DNA2
gi|168274352|dbj|BAG09596.1| DNA2-like helicase [synthetic construct]
Length = 1060
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 530/1009 (52%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 82 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDMLISGTSIASSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 195 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 255 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 370 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEE 429
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 430 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 486
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 487 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 527 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 756 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 814
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 815 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYA 874
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 875 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 934
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 935 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 992
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1041
>gi|26390571|dbj|BAC25919.1| unnamed protein product [Mus musculus]
Length = 1062
Score = 517 bits (1332), Expect = e-143, Method: Compositional matrix adjust.
Identities = 352/1030 (34%), Positives = 538/1030 (52%), Gaps = 126/1030 (12%)
Query: 398 NEQSGEERAVH--------------LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
NE+ EE+ +H L W + PGD V++ G+ + + +
Sbjct: 58 NERGAEEKRLHVTASQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWI-IDDDFG 116
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIP 502
+ I++PD+++SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + +
Sbjct: 117 YFILYPDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFA 176
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLN 557
+ L+E A L+ ++++ +Y +++++I + E +P W F S +
Sbjct: 177 PER-LQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLPSFSKWAEDFMRKGPSSEFP 235
Query: 558 TPTVDFGSDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ SDG + +++ + DIEE W+P++GLKG ID ++ VK + + ++
Sbjct: 236 QMQLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVK-KHRDCKMKYK 294
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTGK N S+EHR+QV+LYTLL ER + ++G L YL++ Q V
Sbjct: 295 VMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHL 350
Query: 673 DLVGLIMRRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGNM------- 716
D L+ RN A ++ +A+ ++ LP ++ K CS +GN
Sbjct: 351 DKRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAV 410
Query: 717 ----------------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRG 758
HL AH + W ++ LE+ K+ + IW +
Sbjct: 411 EEQGDDASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPA 470
Query: 759 SGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
S C+ ++V E D +++++F R++ P P N
Sbjct: 471 SELEESGNCVGNLV---RTEPVSRVCDGQYLHNFQRKNGPMPATN--------------- 512
Query: 819 DMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR-LPGRNSSSDADSL 876
L +GD +ILS E +L A++ G + ++++ V+ + L LP
Sbjct: 513 -----LMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNLSTLPATT-------- 559
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDP 934
V+R+D++E S NL +L + S +LR +I+D P+F + SV D
Sbjct: 560 ---VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDA 616
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
+ K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLT
Sbjct: 617 KDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLT 676
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQ 1050
SYT+SAVDN+L+KL + F+R+G+ VH +IQK + +I S+ +++ +
Sbjct: 677 SYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNS 736
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV
Sbjct: 737 HPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLV 796
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y +L CGSD +A
Sbjct: 797 VNREARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVA 855
Query: 1171 NAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
NA + + +L S SPWL L P PV F+NTD +PA E ++ ++N
Sbjct: 856 NAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNV 915
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRD 1275
EA LI +T +K DIG+I PY Q +I L SV VE++T+DKYQGRD
Sbjct: 916 TEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRD 975
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K ILVSFVRS+E+ LL DW R+NVALTRAK KLI++GS +L + P L L +
Sbjct: 976 KSLILVSFVRSNED--GTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFD 1033
Query: 1336 KVGEQSGILN 1345
+ + IL+
Sbjct: 1034 HLNAEQLILD 1043
>gi|292620199|ref|XP_687974.4| PREDICTED: si:ch211-1n9.7 [Danio rerio]
Length = 1397
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 357/1004 (35%), Positives = 520/1004 (51%), Gaps = 132/1004 (13%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVG-----RENNFLIVHPDVLVSGTRVAASFS 463
L + W T++ GD +++ +GKC G R++ FLI+ PD+L+SGT +A+S
Sbjct: 399 LKDGWESTLVTVGDIIHL------EGKCVSGLWTIDRDSAFLILLPDLLISGTSIASSIR 452
Query: 464 CPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK--NIE 520
C RR VL E K + +L GT++H IFQ M + + ++ +A L+ +
Sbjct: 453 CMRRGVLGEMFKAFDGGSKQMLNGTIVHDIFQKAAMSSDFSSEKIQTFATEALRSPNYLG 512
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP--------TVDFGSDGL---- 568
+Y+ + + D+ + + E +P + W Q L+T T+ SDG
Sbjct: 513 QMYSLKLTQADMRQEVEEYLPSISEWA-----KQYLHTSPQAGQKQLTLKLPSDGALSKQ 567
Query: 569 ---KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
+ +++ DIEE W P++GLKG ID + VKI + + I+PLE KTGK N
Sbjct: 568 DASSSVMVTDFVDIEENIWCPRFGLKGKIDVTAGVKIHRRGRKPMERIVPLELKTGKESN 627
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S+EHR+QVILYTL+ S R ++G L YL++ V+ D LI RN A
Sbjct: 628 ---SIEHRSQVILYTLMSSARRCDP-EAGFLVYLKTGSLHPVVGNHMDRRELIKIRNSLA 683
Query: 686 ----NDIIKA---STTQQLPPMLRAYGGNKECSGLGN----------------------M 716
N++IK S QLP ++ K C N
Sbjct: 684 HHIGNNLIKVDGKSQMAQLPAIVSDQQTCKYCPQKRNCAIYNRAVERDPVEKCSENPQAF 743
Query: 717 FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ--VVKNEIWCSRGSGGNHFTGCLSSIVLD 774
S HL+ H + HW L LEA M+ + IW GC ++ L
Sbjct: 744 VQSESEHLSQVHLQYFSHWLLLCSLEALTMENKGGRRNIWLQTAQQREKIGGCAGNMRLA 803
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
D + + F R+ +G+ + I GD +++S
Sbjct: 804 GG---VSILSDGVYKHSFERK----------EGEQTLTGLI----------VGDRIVVSD 840
Query: 835 ESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
+ L +++G +TEI+ V+ S K L N+ V+R+D+DE S
Sbjct: 841 QDSVLIGLSTGYVTEIAVNRVTCSLDKNLSKYSSNT----------VFRLDQDEGAGGLS 890
Query: 894 VMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF-DS-GSVFSQDPA--LSYIWSEKSLNDDQ 949
NL L + S +LR +IV+ P+F DS SV +D +S I K LN Q
Sbjct: 891 THLGNLSMLMENTPTSERLRELIVEFRPPQFIDSLSSVLPRDAKDIVSNIL--KGLNKPQ 948
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
++A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KLK
Sbjct: 949 KQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLKLK 1008
Query: 1010 SQSIDFVRIGRHEVVHKEI---QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
I F+R+GR + VH EI + A I ++EE+++ + +VA TC+G+ +P+
Sbjct: 1009 RFKIGFLRLGRPQKVHHEILPFTEEACRAKGIQTLEELEQLYSRELIVATTCMGVKHPIF 1068
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ ++FD CI+DEA Q + PV +GPL +A +FVLVGDH QLPP+VQ+ EAR GM+ SLF+
Sbjct: 1069 SRRRFDFCIVDEASQISQPVCIGPLFYAQRFVLVGDHQQLPPIVQNAEARSLGMDESLFK 1128
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS--------- 1177
RL E H A+ L QYRM IM LSNAL+Y RL CGS++ ANA +++
Sbjct: 1129 RL-EHHRDAVVQLNVQYRMNSAIMSLSNALMYEGRLECGSEKTANAVLQLPSRAQAEEEL 1187
Query: 1178 DLSSCSP----WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK 1233
+L C P W++ AL P PV F++T +PA E + ++N EA L+ + L+K
Sbjct: 1188 ELYVCQPQYSAWVQAALEPNSPVCFLDTSEVPAPETVEKSGISNHTEAVLVQGLVTLLLK 1247
Query: 1234 NEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
DIG+I PY Q +I L + ++E++T+DKYQGRDK I+VSFVRS N
Sbjct: 1248 AGCRACDIGVIAPYRQQLKVISSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRS--NA 1305
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLL 1333
LL DW R+NVA+TRAK KL+M+GS TL + PL KLL
Sbjct: 1306 EGNLGELLQDWRRLNVAITRAKHKLLMLGSAPTLRRYAPLEKLL 1349
>gi|410222484|gb|JAA08461.1| DNA replication helicase 2 homolog [Pan troglodytes]
gi|410344145|gb|JAA40614.1| DNA replication helicase 2 homolog [Pan troglodytes]
Length = 1061
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 530/1009 (52%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 83 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDMLISGTSIASSIR 136
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 137 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 195
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 196 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 255
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 256 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 311
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 312 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 370
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 371 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDGSSVPIVMLPKIEEE 430
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 431 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 487
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 488 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 527
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 528 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 577
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 578 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 637
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 638 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 697
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 698 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 756
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 757 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 815
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 816 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPHFKDVKLELEFYA 875
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 876 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 935
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 936 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 993
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1042
>gi|432852842|ref|XP_004067412.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Oryzias latipes]
Length = 1318
Score = 517 bits (1331), Expect = e-143, Method: Compositional matrix adjust.
Identities = 338/1003 (33%), Positives = 528/1003 (52%), Gaps = 106/1003 (10%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L + W T + GD V++ G D G V R+ L++ PD L+SGT ++ S C RR+
Sbjct: 320 LKDGWETTPVRRGDVVHLEGR-SDAGTWLVERDQGLLVLQPDSLISGTSISNSIRCMRRA 378
Query: 469 VLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E K + +L GT++H++FQ + + + L + A L + + +Y
Sbjct: 379 VLGEMFKSFDGGSKQMLNGTMVHEVFQGAAKAKDFSSEKLFKLADEALHSPRYLGDMYTL 438
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQD--------LNTPTVDFG-SDGLKKLKISEV 576
GV++ ++ + L++ +P + NW + S LN G + + ++++
Sbjct: 439 GVSQEEMKQELLDYLPSLENWASEYLSSSKPKSIGLKILNPSRAPGGCQESNAVVTVTDL 498
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEIN--GMILPLEFKTGKIPNGQSSMEHRA 634
TDIEE W+P++GLKG ID + +V+I+ R + PLE KTG+ N S+EHR+
Sbjct: 499 TDIEENVWSPRFGLKGKIDVTAQVQIQRPRTSRSPEEKTFPLELKTGRESN---SIEHRS 555
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIK 690
QVILYTL+ ERY + ++GLL YL++ V D L+ RN A N + K
Sbjct: 556 QVILYTLMSMERY--NPEAGLLLYLKTGSMHPVAPSHMDRRELLKLRNTLAHHLHNSVEK 613
Query: 691 A---STTQQLPPMLRAYGGNKEC---------------------SGLGNMFDSHIYHLTT 726
S Q+LP +L + + C + + HL
Sbjct: 614 GADLSNLQRLPDILTSRQTCQYCPQKLNCALYERALDPSSADPSDDVRDFLQQECGHLAQ 673
Query: 727 AHCSFLRHWDRLIDLEAKEMQV--VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
H ++ HW L LEA M+ + IW C+ ++ L + Q
Sbjct: 674 QHLNYFSHWLLLCILEAVTMETKNSRKHIWLQSIESSEKNGSCVGNLQLKDAVAAQA--- 730
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVAS 843
++ F++ F R G+A +C L +GD +++S + RL +A+
Sbjct: 731 EDVFLHRFQR----------------TGSAPSQSATNCGLTNGDRIVVSDQDGRLVGLAT 774
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G + E+ + VS + S+ D ++R+D DE + S NL +L
Sbjct: 775 GYLCEVDKTSVSCTLSR-----------DLSKFRDVLFRLDADEGVVGMSTHLTNLSRLM 823
Query: 904 LQSAQSSQLRRMIVDLEAPRF--DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
S +LR++IVDL P F + SV +D + K LN Q++A+ KVL +KD
Sbjct: 824 ENCQDSERLRKLIVDLRPPEFIFNLSSVLPRDAKETVAEILKGLNKPQKQAMKKVLLSKD 883
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
Y LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KLK + F+R+G+
Sbjct: 884 YTLIVGMPGTGKTTTICTLVRILQACGFSVLLTSYTHSAVDNILLKLKRFRVGFLRLGQG 943
Query: 1022 EVVHKEIQKHC---LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ +H +I + + ++++ ++++ ++ VVA TC+GI +P+ T ++FD CI+DE
Sbjct: 944 QKIHPDILPYTEENVRKKGVHTLLDLEQLYNKELVVATTCMGIKHPIFTRRRFDYCIVDE 1003
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + P+ LGPL +A +FVLVGDH QLPP+VQ+ EAR GM+ SLF+RL E H +A+
Sbjct: 1004 ASQISQPICLGPLFYAHRFVLVGDHQQLPPIVQNKEARSLGMDESLFKRL-EVHGEAVVQ 1062
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS--------------- 1183
L QYRM + IM LSN+L+Y RL CGS+ A A + + L+S
Sbjct: 1063 LNVQYRMNRQIMSLSNSLMYDGRLECGSERTAAALLTLPSLASVQSELRSHSETHPQHDL 1122
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
W++ L P PV F++ ++PA E+ + ++N EA LI + L+K D+G+
Sbjct: 1123 SWVQFTLLPSNPVCFLDCSLVPALESVEQGGVSNHTEAALIHMLLSLLIKAGCRPSDVGV 1182
Query: 1244 ITPYNSQANLIR---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
I PY Q I+ S + S VE++T+DKYQGRDK I++SFVRS+ + LL D
Sbjct: 1183 IAPYRQQLKTIQALLQSPTFSGVEVNTVDKYQGRDKSLIVLSFVRSNTEEGHL-GELLKD 1241
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
W R+NVA+TRAK KL+MVGS TL + P ++ L+N + +++ I
Sbjct: 1242 WRRLNVAITRAKHKLLMVGSAVTLRRFPPVEKLLNHLQQENMI 1284
>gi|397520478|ref|XP_003830344.1| PREDICTED: DNA2-like helicase [Pan paniscus]
Length = 1060
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 530/1009 (52%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 82 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDMLISGTSIASSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 195 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 255 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 370 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDGSSVPIVMLPKIEEE 429
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 430 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 486
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 487 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 527 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQLQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 756 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 814
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 815 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPHFKDVKLELEFYA 874
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 875 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 934
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 935 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 992
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1041
>gi|301755892|ref|XP_002913804.1| PREDICTED: DNA2-like helicase-like, partial [Ailuropoda melanoleuca]
Length = 1069
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 364/1015 (35%), Positives = 535/1015 (52%), Gaps = 120/1015 (11%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAAS 461
+ER + L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S
Sbjct: 84 KERCI-LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASS 140
Query: 462 FSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KN 518
C RR+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++
Sbjct: 141 IRCMRRAVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRH 199
Query: 519 IESLYACGVNENDIHKTLVEAIPKMLNWIILFK---DSQDLNTPTVDFGSDG-----LKK 570
++ +Y +N+ +I + + E +P W F S D + SDG
Sbjct: 200 LKEMYRLNLNQEEIKQEVEEYLPSFSKWAGDFMHKYTSADFPQMQLALPSDGNNNNSTCN 259
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+++ DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+
Sbjct: 260 IEVINSLDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKELN---SI 315
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI-- 688
EHR+Q++LYTLL ER ++GLL YL++ V + D L+ RN+ A +
Sbjct: 316 EHRSQLVLYTLLSQERRADP-EAGLLLYLKTGHMYPVPAKHLDKRELLRLRNQMAFSLFH 374
Query: 689 -IKASTTQQ-------LPPMLRAYGGNKECSGLGN-----------MFDSHI-------- 721
I S ++ LP ++ K CS +GN M DS +
Sbjct: 375 RINKSAIEKEKTKLAPLPQIIEDQQTCKYCSQIGNCALYSRAVEQQMDDSSVPFGMLPKI 434
Query: 722 ----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDA 775
HL H + W ++ LE++ KN IW S C+ +++
Sbjct: 435 KEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMSASEMEESGNCIGNLI--- 491
Query: 776 SNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
E K+ D +++++F R++ MP NL A GD +ILS
Sbjct: 492 RTECVKTVCDGQYLHNFQRKNGDMPVTNLMA----------------------GDRIILS 529
Query: 834 TESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
E L A++ G + EI+ V+ L RN S +S L +R+D +E
Sbjct: 530 GEERTLFALSRGFVKEINMASVTC-------LLDRNLSVLPESTL---FRLDLEEKTCDI 579
Query: 893 SVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQR 950
NL +L + S +LR +I+D P+F S SV D + K LN QR
Sbjct: 580 DTPLGNLSKLMENTFVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQR 639
Query: 951 RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL
Sbjct: 640 QAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 699
Query: 1011 QSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPL 1065
I F+R+G+ + VH++IQK C S +I S +++ + ++VA TC+GI +P+
Sbjct: 700 FKIGFLRLGQTQKVHQDIQKFTEEEVCRSK-SIKSSALLEELYNSHRIVATTCMGINHPI 758
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF
Sbjct: 759 FSRKTFDFCIVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLF 818
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----- 1180
+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA I + +
Sbjct: 819 KRL-EQNENAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLE 877
Query: 1181 -------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK 1233
S +PWL P PV F+NTD +PA E + ++N EA LI +T +K
Sbjct: 878 LEFYADYSENPWLIGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIK 937
Query: 1234 NEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ DIGII PY Q +I L S+ VE++T+DKYQGRDK ILVSFVRS N
Sbjct: 938 AGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRS--NK 995
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L++ P L L++ + + I++
Sbjct: 996 DGPLGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLKSEKLIMD 1050
>gi|390472695|ref|XP_002807491.2| PREDICTED: DNA2-like helicase [Callithrix jacchus]
Length = 1088
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 355/1004 (35%), Positives = 529/1004 (52%), Gaps = 110/1004 (10%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ GE + ++ +LI++PD+L+SGT +A+S C RR+
Sbjct: 109 LRNDWCSVSVEPGDIIHLEGECTSDTWI-IDKDFGYLILYPDMLISGTSIASSIRCMRRA 167
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + SE + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 168 VLSETFRSSEPATRQMLIGTVLHEVFQKAISNSFAPEK-LQELAFQTIQEIRHLKEMYRL 226
Query: 526 GVNENDIHKTLVEAIPKMLNWI--ILFKDS------QDLNTPTVDFGSDGLKKLKISEVT 577
+N+++I + + + +P W + K+S L+ P+ + + +++ +
Sbjct: 227 NLNQDEIKQEVEDYLPAFCKWAGDYMHKNSSTDFPQMQLSLPSDNNKDNSTCNIEVVKSV 286
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+
Sbjct: 287 DIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQVV 342
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++T
Sbjct: 343 LYTLLSQERRTDP-EAGLLLYLKTGQMYPVPANHLDRRELLKLRNQMAFSLFHRISKSAT 401
Query: 694 TQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
Q+ LP ++ K CS +GN + HL
Sbjct: 402 RQKTQLASLPQIIEEEKTCKYCSQMGNCALYSRAVEQQMDGNSVPIVMMPKIEEETQHLK 461
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H + W ++ LE++ KN IW C+ +++ EH K+
Sbjct: 462 HTHLEYFNLWYLMLTLESQSKDNKKNHQNIWLMPTLEMEKGGSCIGNLI---RMEHVKTV 518
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVA 842
D +++++F QH AIP + L +GD +I+S E L A+
Sbjct: 519 CDGQYLHNF--QHK--------------NGAIPVTN----LMAGDRIIVSGEERSLFALC 558
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + E++ V+ L RN S +S L +R+D++E NL +L
Sbjct: 559 RGYVKEVNMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLSKL 608
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
+ S +LR +I+D P F S SV D + K LN QR+A+ KVL +K
Sbjct: 609 MEDTFISKKLRDLIIDFREPHFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSK 668
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
DY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G+
Sbjct: 669 DYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQ 728
Query: 1021 HEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
+ VH IQK + +I S+ +++ + +VA TC+GI +P+ + K FD CI+
Sbjct: 729 TQKVHPAIQKFTEQEVCQSKSIKSLALLEELYNSQLIVATTCMGINHPIFSRKIFDFCIV 788
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++ A+
Sbjct: 789 DEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNHEARALGMSESLFKRL-EQNKNAV 847
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCSP 1184
L QYRM IM LSN L Y +L CGSD++ANA I + S +P
Sbjct: 848 VQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPRFKDVKLELEFYVDYSDNP 907
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WL P PV F+NTD +PA E + ++N EA LI +T +K DIGII
Sbjct: 908 WLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSIFIKAGCNPSDIGII 967
Query: 1245 TPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
PY Q +I L SV VE++T+DKYQGRDK +LVSFVRS N LL DW
Sbjct: 968 APYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGELLKDW 1025
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRAK KLI++G +L+ P L+ L++ + + I++
Sbjct: 1026 RRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLDHLNSEKLIID 1069
>gi|213409063|ref|XP_002175302.1| DNA replication ATP-dependent helicase dna2 [Schizosaccharomyces
japonicus yFS275]
gi|212003349|gb|EEB09009.1| DNA replication ATP-dependent helicase dna2 [Schizosaccharomyces
japonicus yFS275]
Length = 1178
Score = 516 bits (1329), Expect = e-143, Method: Compositional matrix adjust.
Identities = 357/1022 (34%), Positives = 529/1022 (51%), Gaps = 106/1022 (10%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
FLV+E E+ + D KV+ L N + + L ++W T + GD++ +
Sbjct: 170 FLVIETREEYEEKN--DYSFMKKVILLTNIVNRKPSTAILLDEWSDTPVRTGDSLAIYDA 227
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
+ +G V N ++I+ P L+S T VA SF+C RR+ E + ++ G +
Sbjct: 228 SEIEGDMIVSNSNGYIIMFPFYLLSATSVADSFTCLRRATFKEWYGSTHYLTKPIVYGNI 287
Query: 489 LHQIFQAGLM--KEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW 546
LH++FQ L E + L+ R ++ +++ G+ + L E +P + W
Sbjct: 288 LHRVFQNCLRDPNEFTGLDKLDALLRNSIKLETVNIHFAGLTNDQCLNELRERLPAIRKW 347
Query: 547 IILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKR 606
++ ++ G D + + I + D EE + ++GLKG IDA++ I R
Sbjct: 348 ML-----------SITTG-DERQPVLIKALIDTEESILSYRFGLKGNIDATVEASITGMR 395
Query: 607 NEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG 666
+ PLE KTGK+ N S H AQ ++YTLLMSE+ I + LL YL++
Sbjct: 396 PSV----YPLELKTGKVTNTTS---HFAQALMYTLLMSEKSGSDIQNALLAYLETSTLTP 448
Query: 667 VMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML-------RAYGGNKECSGLGNMF-- 717
V + L G+I+ RN + I ++PP++ R Y ++EC F
Sbjct: 449 VKSTVNKLRGIIIARNRLISSIWH----HEIPPIVGNVRTCQRCYL-SEECFTYNEAFKN 503
Query: 718 -DSHIYHLTTAHCS-----------FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFT 765
DS I + + + S FLR WDRL+ E K + K +++
Sbjct: 504 EDSEIEPIQSLYQSKLETRDKKDIEFLRKWDRLLLFEEKIISKCKFDMYFLSAEEKEERG 563
Query: 766 GCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
C++++ L + S R++Y F + +LN
Sbjct: 564 DCVNNLKLTKFPLDRGSSLSKRYLYSFFKDESIRTSLNV--------------------- 602
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVS---FSKPLRLPGRNSSS----DADSLLH 878
GD+V+LS+ + + +A G+IT + R V F P L NS + DS+
Sbjct: 603 -GDHVLLSSTNGKWTLAKGVITYMERNQVDTELNQFLSPTILNKFNSGDLPFPETDSV-D 660
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
++RIDKDE S++R N+++L + A+ LRR+I+ L+AP F PA
Sbjct: 661 ALFRIDKDEYTGGLSLIRSNILKLCIL-AEHESLRRLIIHLDAPSFTKHKT---KPASVV 716
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ + LN DQR+AI VL A DYALILGMPGTGKT+T+ + L+ G S+LL+SYT+
Sbjct: 717 M---EQLNSDQRKAIDHVLCADDYALILGMPGTGKTTTIACLIHTLVSNGKSVLLSSYTH 773
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE-EIKKRLDQVKVVAVT 1057
+AVDN+L+KLK + +R+G V E+ C + S + +KK ++ +VA +
Sbjct: 774 TAVDNILLKLKQFNFPILRLGSKSKVLPEVFSFCFGEHDTASDDITVKKIYEEPLIVATS 833
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
CLGI +PL + +KFD C++DEA Q LPV LGPL A KFVL+GDHYQL PLV+S+EA E
Sbjct: 834 CLGIQHPLFSKRKFDYCLIDEASQIPLPVCLGPLENAHKFVLIGDHYQLAPLVKSSEATE 893
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
NG+ +SLF+ L+E HP+A+S L+ QYRM + I+ LSN LIYG L CGS + A ++ +S
Sbjct: 894 NGLGLSLFKLLTEAHPEAVSLLRLQYRMNEDIVSLSNKLIYGGMLQCGSQKTALKRLHIS 953
Query: 1178 DLSS-------CS--------PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEAC 1222
D CS PWL + L+P + V+F +TD A E K+ +++ N EA
Sbjct: 954 DTDPQKINRLLCSVKIGNSNLPWLHKLLDPAKSVLFFDTDGCSASETKNGRSIENIKEAD 1013
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILV 1281
I L +E K IG+IT Y SQ +R LS VEI+T DKYQGRDKD IL+
Sbjct: 1014 FIFNSVLALTVLGLEQKAIGVITIYRSQVYCLRRVLSDFPEVEINTADKYQGRDKDVILL 1073
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
SFVRS NP + LL DW RINV LTRAK K IM GS +TLS L + L + + E+
Sbjct: 1074 SFVRS--NPNDSVGELLKDWKRINVILTRAKTKCIMFGSKKTLSSATLFRSLFSFLEEKG 1131
Query: 1342 GI 1343
+
Sbjct: 1132 WL 1133
>gi|348575708|ref|XP_003473630.1| PREDICTED: DNA2-like helicase-like [Cavia porcellus]
Length = 1061
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 354/1018 (34%), Positives = 530/1018 (52%), Gaps = 127/1018 (12%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTR 457
+ER + L DW+ + PGD +++ +G C + ++ FLI++PDVL+SGT
Sbjct: 77 KERCI-LRNDWYSVPVQPGDIIHL------EGDCSSDTWIIDKDFGFLILYPDVLISGTS 129
Query: 458 VAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ 516
+ +S C RR+VL+E K S+ + L+G +LH++FQ + + K L E A +Q
Sbjct: 130 IVSSIRCMRRAVLNETFKYSDPATRQMLIGMVLHEVFQKAISGSFASEK-LRELAFQTVQ 188
Query: 517 --KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS--------QDLNTPTVDFGSD 566
++++ +Y +++++I + + E +P L W F L+ P+ D ++
Sbjct: 189 EIRHLKEMYRLNLSQDEIKQEVEEYLPSFLKWAGDFMHKSVSTDFPQMQLSLPSDDSNNN 248
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
+++ DIEE W+P++G+KG ID ++ VKI + ++ ++PLE KTGK
Sbjct: 249 STCNIEVINSLDIEESIWSPRFGIKGKIDVTVGVKIH-RGHKAKYKVMPLELKTGK---E 304
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
S+EH QV+LYTLL ER + ++GLL YL++ Q V + D L+ RN+
Sbjct: 305 SKSIEHHGQVVLYTLLCQERRVDP-EAGLLLYLKTGQMYPVPAKHLDKRELLKLRNQMVF 363
Query: 687 DII---------KASTTQQLPPMLRAYGGNKECSGLGN-----------MFDSHI----- 721
++ K + LP ++ K CS + N M D +
Sbjct: 364 SLMHRTSKSANEKETRLTPLPQIIEEEKICKYCSQMNNCALYSRAVEQQMEDGSVPVVML 423
Query: 722 -------YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIV 772
HL H + W ++ LE++ +N IW S C+ S++
Sbjct: 424 PRIKEATEHLKLTHLQYFSLWCLMLTLESQSKDNRRNHQNIWLVPASEMEKSGSCIGSLI 483
Query: 773 LDASNEHQKSYRDNRFVYHFVRQ--HMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
EH K+ D +++++F R+ MP NL A GD V
Sbjct: 484 ---RTEHVKTVCDGQYLHNFQRKTGAMPVTNLMA----------------------GDRV 518
Query: 831 ILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIM 889
ILS E L A+ G + EI+ V+ L RN S +S L +R+D++
Sbjct: 519 ILSGEERTLFALCRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEGKN 568
Query: 890 TSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSG--SVFSQDPALSYIWSEKSLND 947
NL +L + S++LR +I+D + P+F S SV D + K LN
Sbjct: 569 CDIDTPLGNLSKLMENTQHSTRLRDLIIDFQEPQFISSLSSVLPHDAKDTVAGILKGLNK 628
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+K
Sbjct: 629 PQRQAMKKVLLSKDYTLIVGMPGTGKTTTICSLVRILYACGFSVLLTSYTHSAVDNILLK 688
Query: 1008 LKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
L I F+R+G+ + VH +IQK C S +I S+ ++ + +VA TC+GI
Sbjct: 689 LNKFKIKFLRLGQTQKVHPDIQKFTEEEICRSK-SIKSLAVLEDLYNSQLIVATTCMGIN 747
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM
Sbjct: 748 HPIFSRKTFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVVNREARALGMSE 807
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS-- 1180
SLF+RL E + A+ L QYRM IM LSN L Y +L CGSD +A+A + + +
Sbjct: 808 SLFKRL-ERNKNAVVQLTVQYRMNSTIMSLSNKLTYEGKLECGSDRVASAVMILPNFKDV 866
Query: 1181 ----------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
S SPWL P PV F+NT+ +PA E + ++N +EA LI +T
Sbjct: 867 KLELEIYADYSDSPWLSGVFEPSNPVCFLNTEKVPAPEQVEKSGVSNIIEAKLIVFLTAT 926
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+K DIGII PY Q +IR L S+ +VE++T+DKYQGRDK ILVSFVRS
Sbjct: 927 FIKAGCNPSDIGIIAPYRQQLKIIRDLLPHSSLGTVEVNTVDKYQGRDKRIILVSFVRS- 985
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
N L DW R+NVA+TRAK KLI++G +L + P L+ L + + I++
Sbjct: 986 -NKDGTLGELWKDWRRLNVAITRAKHKLILLGCVPSLKQYPPLEKLFCHLNSEKLIID 1042
>gi|119574681|gb|EAW54296.1| hCG32858 [Homo sapiens]
Length = 1068
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1007 (35%), Positives = 528/1007 (52%), Gaps = 121/1007 (12%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ +LI++PD+L+SGT +A+S
Sbjct: 82 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGYLILYPDMLISGTSIASSIR 135
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 136 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 194
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 195 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 254
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 255 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 310
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 311 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 369
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 370 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEE 429
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 430 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 486
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 487 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 527 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 756 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 814
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 815 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYA 874
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 875 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 934
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 935 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 992
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I
Sbjct: 993 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLI 1039
>gi|332834188|ref|XP_001163213.2| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2 [Pan
troglodytes]
gi|410263616|gb|JAA19774.1| DNA replication helicase 2 homolog [Pan troglodytes]
Length = 1061
Score = 515 bits (1326), Expect = e-143, Method: Compositional matrix adjust.
Identities = 359/1009 (35%), Positives = 529/1009 (52%), Gaps = 121/1009 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFS 463
L DW + PGD +++ +G C + ++ LI++PD+L+SGT +A+S
Sbjct: 83 LRNDWCSVPVEPGDIIHL------EGDCTSDTWIIDKDFGHLILYPDMLISGTSIASSIR 136
Query: 464 CPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIE 520
C RR+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++
Sbjct: 137 CMRRAVLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLK 195
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLK 572
+Y +++++I + + + +P W F S D + SD K ++
Sbjct: 196 EMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIE 255
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EH
Sbjct: 256 VVKPMDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEH 311
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDI 688
R+QV+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I
Sbjct: 312 RSQVVLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRI 370
Query: 689 IKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSH 720
K++T Q+ LP ++ K CS +GN +
Sbjct: 371 SKSATRQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDGSSVPIVMLPKIEEE 430
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNE 778
HL H + W ++ LE++ KN IW S C+ +++ E
Sbjct: 431 TQHLKQTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RME 487
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
H K D +++++F +H AIP + L +GD VI+S E
Sbjct: 488 HVKIVCDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERS 527
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ V+ L RN S +S L +R+D++E
Sbjct: 528 LFALSRGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 577
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 578 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 637
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 638 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 697
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 698 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 756
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 757 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 815
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 816 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPHFKDVKLELEFYA 875
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 876 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 935
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 936 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 993
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 994 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 1042
>gi|338716826|ref|XP_001502648.3| PREDICTED: DNA2-like helicase [Equus caballus]
Length = 1062
Score = 514 bits (1325), Expect = e-142, Method: Compositional matrix adjust.
Identities = 359/1007 (35%), Positives = 530/1007 (52%), Gaps = 115/1007 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 82 LRNDWCSVPVEPGDIIHLEGDCISDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 139
Query: 468 SVLDERLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 140 AVLSETFRSSDSVTRQMLIGTVLHEVFQKAISDSFAPEK-LQELAFQTVQEIRHLKEMYR 198
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFK---DSQDLNTPTVDFGSDGLKK-----LKISEV 576
+N+++I + + + +P W F S DL SDG +++
Sbjct: 199 LNLNQDEIKQEVEDYLPSFSKWAGDFMHKYTSADLPQMQFSLPSDGSNNNSTCSIEVINS 258
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 259 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQL 314
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAS 692
+LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++
Sbjct: 315 VLYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLRLRNQMAFSLFHRISKSA 373
Query: 693 TTQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI------------YH 723
T ++ LP ++ K CS +GN M DS + H
Sbjct: 374 TGKEKTKLAPLPEIIEEQQTCKYCSQIGNCTLYSRAVEQQMDDSSVPIGMLPKIEEETQH 433
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
L H + W ++ LE++ KN IW S C+ +++ EH K
Sbjct: 434 LKPTHLEYFSLWCLMLTLESQSKDKKKNYQNIWLMPASEIEESGSCIGNLI---RTEHVK 490
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-A 840
+ D +++++F R++ P N L +GD +ILS E L A
Sbjct: 491 TVCDGQYLHNFQRKNGAMPITN--------------------LMAGDRIILSGEERTLFA 530
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
++ G + EI+ V+ L RN S S L +R+D++E NL
Sbjct: 531 LSRGYVKEINMTTVTC-------LLDRNLSVLPKSTL---FRLDQEEKSCDIDTPLGNLS 580
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
+L + S +LR +I+D P+F S SV D + K LN QR+A+ KVL
Sbjct: 581 KLMENTHTSQKLRDLIIDFREPQFISYLSSVLPHDAKDTVASILKGLNKPQRQAMKKVLL 640
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
+KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+
Sbjct: 641 SKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRL 700
Query: 1019 GRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
G+ + VH +IQK C S +I S+ +++ +VA TC+G+ +P+ + K FD
Sbjct: 701 GQTQKVHPDIQKFTEEEICRSK-SIKSLALLEELYSSQLIVATTCMGVNHPIFSRKIFDF 759
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++
Sbjct: 760 CIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNCEARALGMSESLFKRL-EQNK 818
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------S 1181
A+ L QYRM IM LSN L Y +L CGS+++ANA I + + S
Sbjct: 819 NAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSEKVANAVINLPNFKDVKLELEFYADYS 878
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
+PWL P PV F+NTD +PA E + ++N EA LI +T +K +
Sbjct: 879 ENPWLVGVFEPNNPVCFLNTDKVPAPEQVEKAGVSNITEAKLIVSLTSIFIKAGCNPSAV 938
Query: 1242 GIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
GII PY Q +I L SV VE++T+DKYQGRDK ILVSFVRS N LL
Sbjct: 939 GIIAPYRQQLKIINDLLARSSVGPVEVNTVDKYQGRDKSIILVSFVRS--NKDGTVGELL 996
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
DW R+NVA+TRAK KLI++G +L++ P L+ L+ + + I++
Sbjct: 997 KDWRRLNVAITRAKHKLILLGCVPSLNRYPPLEKLLCHLNSEKLIID 1043
>gi|281346967|gb|EFB22551.1| hypothetical protein PANDA_001621 [Ailuropoda melanoleuca]
Length = 1016
Score = 514 bits (1325), Expect = e-142, Method: Compositional matrix adjust.
Identities = 364/1013 (35%), Positives = 533/1013 (52%), Gaps = 120/1013 (11%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAAS 461
+ER + L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S
Sbjct: 52 KERCI-LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASS 108
Query: 462 FSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KN 518
C RR+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++
Sbjct: 109 IRCMRRAVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRH 167
Query: 519 IESLYACGVNENDIHKTLVEAIPKMLNWIILFK---DSQDLNTPTVDFGSDG-----LKK 570
++ +Y +N+ +I + + E +P W F S D + SDG
Sbjct: 168 LKEMYRLNLNQEEIKQEVEEYLPSFSKWAGDFMHKYTSADFPQMQLALPSDGNNNNSTCN 227
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+++ DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+
Sbjct: 228 IEVINSLDIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKELN---SI 283
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI-- 688
EHR+Q++LYTLL ER ++GLL YL++ V + D L+ RN+ A +
Sbjct: 284 EHRSQLVLYTLLSQERRADP-EAGLLLYLKTGHMYPVPAKHLDKRELLRLRNQMAFSLFH 342
Query: 689 -IKASTTQQ-------LPPMLRAYGGNKECSGLGN-----------MFDSHI-------- 721
I S ++ LP ++ K CS +GN M DS +
Sbjct: 343 RINKSAIEKEKTKLAPLPQIIEDQQTCKYCSQIGNCALYSRAVEQQMDDSSVPFGMLPKI 402
Query: 722 ----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDA 775
HL H + W ++ LE++ KN IW S C+ +++
Sbjct: 403 KEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNHQHIWLMSASEMEESGNCIGNLI--- 459
Query: 776 SNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
E K+ D +++++F R++ MP NL A GD +ILS
Sbjct: 460 RTECVKTVCDGQYLHNFQRKNGDMPVTNLMA----------------------GDRIILS 497
Query: 834 TESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
E L A++ G + EI+ V+ L RN S +S L +R+D +E
Sbjct: 498 GEERTLFALSRGFVKEINMASVTC-------LLDRNLSVLPESTL---FRLDLEEKTCDI 547
Query: 893 SVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQR 950
NL +L + S +LR +I+D P+F S SV D + K LN QR
Sbjct: 548 DTPLGNLSKLMENTFVSQKLRDLIIDFREPQFISYLSSVLPYDAKDTVACILKGLNKPQR 607
Query: 951 RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL
Sbjct: 608 QAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAK 667
Query: 1011 QSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPL 1065
I F+R+G+ + VH++IQK C S +I S +++ + ++VA TC+GI +P+
Sbjct: 668 FKIGFLRLGQTQKVHQDIQKFTEEEVCRSK-SIKSSALLEELYNSHRIVATTCMGINHPI 726
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF
Sbjct: 727 FSRKTFDFCIVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLVLNREARALGMSESLF 786
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----- 1180
+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA I + +
Sbjct: 787 KRL-EQNENAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLPNFKDVKLE 845
Query: 1181 -------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK 1233
S +PWL P PV F+NTD +PA E + ++N EA LI +T +K
Sbjct: 846 LEFYADYSENPWLIGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLIVFLTSVFIK 905
Query: 1234 NEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ DIGII PY Q +I L S+ VE++T+DKYQGRDK ILVSFVRS N
Sbjct: 906 AGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNTVDKYQGRDKSIILVSFVRS--NK 963
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
LL DW R+NVA+TRAK KLI++G +L++ P L L++ + + I
Sbjct: 964 DGPLGELLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLGKLLHHLKSEKLI 1016
>gi|431904169|gb|ELK09591.1| DNA2-like helicase [Pteropus alecto]
Length = 1094
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 357/994 (35%), Positives = 525/994 (52%), Gaps = 111/994 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + + +LI++PD+L+SGT +A+S C RR+
Sbjct: 79 LRNDWCSVPVEPGDIIHLEGDCISHTWI-INEDFGYLILYPDMLISGTSIASSIRCMRRA 137
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
+L E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 138 ILSETFRNSDPATRQMLIGTILHEVFQKAINDSFDPEK-LQELAFQTVQEIRHLKEMYRL 196
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKD---SQDLNTPTVDFGSDGLKK-----LKISEVT 577
+N +++ + + E +P W F + S D + SDG +++ +
Sbjct: 197 NLNPDEVKQEVEEYLPSFSKWSGDFMNKCTSTDFPQMQLSLPSDGSNNNATCNIEVVKSL 256
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + I+PLE KTGK N S+EHR+Q++
Sbjct: 257 DIEESVWSPRFGLKGKIDVTVGVKIH-RGCTTKYKIMPLELKTGKESN---SIEHRSQLV 312
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----KAST 693
LYTLL ER ++GLL YL++ Q V + D L+ RN+ A+ + K++T
Sbjct: 313 LYTLLSQERRADP-EAGLLLYLRTGQMYPVPARHLDKRELLKLRNQMASSLFHRINKSAT 371
Query: 694 TQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI------------YHL 724
++ LP ++ K CS +GN M D+ + HL
Sbjct: 372 GKEKTNLAPLPQIIDEQQTCKYCSQVGNCALYSRAVEQQMDDNSVPVGMLPKIKEETQHL 431
Query: 725 TTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
H + W ++ LE++ KN IW S C+ +++ EH K+
Sbjct: 432 KRTHLEYFSLWYLMLTLESQSKDNKKNHQNIWLMPSSEMEQSGSCIGNLI---RREHVKT 488
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AV 841
D +++++F R++ AIP + L +GD +ILS E L A+
Sbjct: 489 VCDGQYLHNFQRKN----------------GAIPFTN----LMAGDRIILSGEERTLFAL 528
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
+ G + EI+ V+ L RN S +S L +R+D++E NL +
Sbjct: 529 SRGYVKEINVTTVTC-------LLDRNLSVLPESTL---FRVDQEEKNCGIDTPLGNLSK 578
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
L + S +LR +I+D P+F S SV D + K LN QR+A+ KVL +
Sbjct: 579 LMKNTNTSQKLRDLIIDFREPQFISYLSSVLPHDAKDAVACILKGLNKPQRQAMKKVLLS 638
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+G
Sbjct: 639 KDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLG 698
Query: 1020 RHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
+ VH +IQK + +I S+ +++ +VA TC+GI +P+ + K FD CI
Sbjct: 699 HTQNVHPDIQKFTEEEICKSKSIKSLALLEELYSSQLIVATTCMGINHPIFSRKVFDFCI 758
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++ A
Sbjct: 759 VDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNQEARALGMSESLFKRL-EQNKNA 817
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCS 1183
+ L QYRM IM LSN L YG +L CGSD++ANA I + + S +
Sbjct: 818 VIQLTVQYRMNSKIMSLSNKLTYGGKLECGSDKVANAVINLPNFKDVKLELEFYADYSEN 877
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
PWL P PV F+NTD +PA E + ++N EA LI +T +K DIGI
Sbjct: 878 PWLIGVFEPNNPVCFLNTDKVPAPEQIEKGGVSNITEAKLIVFLTSIFIKAGCNPLDIGI 937
Query: 1244 ITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
I PY Q +I L SV VE++T+DKYQGRDK ILVSFVRS N LL D
Sbjct: 938 IAPYRQQLKIINDLLAHSSVGMVEVNTVDKYQGRDKSIILVSFVRS--NKDGTLGELLKD 995
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
W R+NVA+TRAK KLI++G +L P L L+
Sbjct: 996 WRRLNVAITRAKHKLILLGCVPSLYCYPPLGKLL 1029
>gi|403413195|emb|CCL99895.1| predicted protein [Fibroporia radiculosa]
Length = 1216
Score = 514 bits (1323), Expect = e-142, Method: Compositional matrix adjust.
Identities = 337/1028 (32%), Positives = 517/1028 (50%), Gaps = 118/1028 (11%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFD---------DQGKCDVGRENNFLIVHPDVLV 453
E R V L + W + PGD VN+IG+F + + ++NF I HPD+L+
Sbjct: 155 ECRRVILRDGWITADVRPGDIVNIIGDFSVPLFTSDSMNMPSISISSKSNFFIHHPDLLI 214
Query: 454 SGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYAR 512
+ T ++++ C R+ ++ ++ S + + S + GT+LH++ Q L + KF+E
Sbjct: 215 TATALSSAPQCLRKPLISNLVRGSVDVTPSLVWGTMLHEVMQTCLSEGCWDEKFVEARIT 274
Query: 513 LVLQKNIESLYA--CGVNENDIH-KTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
+ + + L V + I K I + I + D
Sbjct: 275 DEVGRGLSELMRINTSVEQATIEMKARARGIKSFADKYIAQEPKSDAILTNTRAAQGQTS 334
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIES-----------KRNEINGMILPLEF 618
L IS++ DIEE W+P YG+KG IDAS+ I + +P E
Sbjct: 335 LLAISKLHDIEEDIWSPTYGIKGKIDASVNAVISEVEEGVGFFKGPAKTTTQNWTMPFEI 394
Query: 619 KTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLI 678
KTG+ G MEHRAQ +LYTLLM+ERY + SGLLYY +SD+ V R+++ L+
Sbjct: 395 KTGRAGAG---MEHRAQTMLYTLLMAERYGSEVPSGLLYYTRSDEVVRVPAARNEIHSLL 451
Query: 679 MRRNEFANDIIKASTTQQ--------------------------LPPML-------RAYG 705
+ RNE A +++ + LPP + R Y
Sbjct: 452 VARNELAGYMMRRMGIPRPLDRSLHDEDIGGGGDDPEPHDIESFLPPTIDDSWQCGRCYA 511
Query: 706 GNK-------------ECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE 752
+ S + +++ H+T +F + W+ LI LE +++ K E
Sbjct: 512 LDTCMLYRKAAEEVVDTTSPIADIYALKTSHITREQGAFFKKWEALIALEEQDLIRFKKE 571
Query: 753 IWCSRGSGGNHFTGCLSSIVLDAS--------NEHQKSYRDNRFVYHFVRQHMPSPNLNA 804
+W C S ++LD S Q R +RF Y F +
Sbjct: 572 LWTMGAREREMHGRCFSDMILDVSYFPVLDSREAAQHGARIHRFTYRFTK---------- 621
Query: 805 SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRL 864
+ + ++ + GD + +S E D LA+A G I ++ + V L L
Sbjct: 622 -------SSKVEVSLLNGHMSFGDAITVSVEPDLLALARGFIIGLTPQELVVGVDHELDL 674
Query: 865 PG---RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEA 921
R ++ ++RIDKDE+ T +R N+ +F S +L ++VDL
Sbjct: 675 QAILERKGGLSSEV----IFRIDKDELATGMGRIRENIAHMFYADGDSRRLS-LVVDLTP 729
Query: 922 PRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P+FD G + P LS + LN QR A+ KVL+A+DYALILGMPGTGKT+ +
Sbjct: 730 PQFDEIGDFDTATPPLSKL---SGLNSSQRIAVSKVLSAQDYALILGMPGTGKTTVIAAI 786
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF--VRIGRHEVVHKEIQKHCLSAMNI 1038
+ L+ G ++LL SYT+SAVDN+L+KLK + DF +R+G + +H + + L++
Sbjct: 787 IHELVSMGKTVLLASYTHSAVDNVLLKLK-HTADFGILRVGNLDKIHPDAFEFTLASRRA 845
Query: 1039 -NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKF 1097
++E++++++ V+A TCL + +PL + +KFD CI+DEA Q TLP LGPL FA KF
Sbjct: 846 ATNIEQLEQQVMTPPVIATTCLSLDHPLFSRRKFDYCIVDEASQITLPTCLGPLRFADKF 905
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALI 1157
VLVGDH+QLPPLV++ AR G++ISLFRRLS+ HP A+ L QYRM + IM LSN LI
Sbjct: 906 VLVGDHFQLPPLVRNRAARRGGLDISLFRRLSDAHPHAVVDLTEQYRMNEDIMLLSNKLI 965
Query: 1158 YGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNN 1217
Y RL CGSDE+A + + + + + C+ V+FV+TD +PA+++ + N
Sbjct: 966 YSGRLHCGSDEVAKRTLTLPNRAFLQSLHATRQSRCK-VVFVDTDAVPAHDSPVGDLVEN 1024
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDK 1276
+EA L+ ++ + L+++ + IG+++ Y Q L+ + L VE+ T D+ QGRDK
Sbjct: 1025 RIEAQLLHQVAESLIRSGVRQDQIGVLSLYRQQIKLLSYYLQDRKEVEVLTADRSQGRDK 1084
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
DCIL+S VRS N L+ DW R+NV+ TRA+ KLI+ GS TL LLK
Sbjct: 1085 DCILISMVRS--NAEGQVGDLVKDWRRMNVSFTRARSKLIIFGSRSTLQGTSLLKEFFEL 1142
Query: 1337 VGEQSGIL 1344
+ + IL
Sbjct: 1143 MESKGWIL 1150
>gi|301101790|ref|XP_002899983.1| DNA2-like helicase [Phytophthora infestans T30-4]
gi|262102558|gb|EEY60610.1| DNA2-like helicase [Phytophthora infestans T30-4]
Length = 1500
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 357/1034 (34%), Positives = 517/1034 (50%), Gaps = 121/1034 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVI-------GEF--DD-------QGKCDVGRENNFLIVHPDVL 452
L +DW+ ++ GD++N++ G F DD Q + V +N ++VHPD+L
Sbjct: 391 LSDDWYDVLVEAGDSINIVFTEQDREGFFTHDDETPASRQQSRILVDNAHNVVVVHPDIL 450
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
VS TRV SF C RR+VL E L + S A LGTL H +F+ L+ + L E A
Sbjct: 451 VSPTRVTTSFGCLRRAVLQETLAVNRPTSKKAFLGTLKHDLFERALLDGLNDSVALLEEA 510
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
+ ++ NI L CG+NE + L + W+ TP D K
Sbjct: 511 KRIVDFNILGLVECGLNEEEALFELQRVVEDYRLWV--NAAVMGSGTPLNDVPPKAGSKA 568
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKI----ESKRNEINGMILPLEFKTGKIPNGQ 627
+S + EEM W+ K+GLKG DAS+ I ++LPLE KTG
Sbjct: 569 HVSRILSTEEMMWSIKWGLKGATDASVEGTIIDPGRGNTGPAGSVVLPLELKTGS--KQY 626
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
+ +EH+ QVILYTLL++ERY + GLL Y+ +T + + + GLIM RN FA+
Sbjct: 627 AGVEHQGQVILYTLLLNERYRQRCQDGLLIYVPPIETNRIAAMATHVRGLIMTRNNFASA 686
Query: 688 IIK------ASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHI 721
I K +++ Q PPM+R G ++ SGL +F
Sbjct: 687 IAKVKAIGGSTSAQVFPPMIRNRRDCERCFQVDECVLHHAATENGTEDSSGLDELFTLMT 746
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG---SGGNHFTGCLSSIVLDASNE 778
HL A ++ + W+RLIDLE + + +W G + C++S+ + +
Sbjct: 747 KHLGEADLTYFKQWNRLIDLEQQHAEKNLRALWLQVGWKREQAQEGSTCIASLKMVSDAP 806
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
R + + N G+S + PT D R + VILS ES
Sbjct: 807 AMSESGAKRTLRFVRDRRQRRDN-----GESGV-ITQPTSFADVRFRVDERVILSAES-- 858
Query: 839 LAVASGLITEISRF------HVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
L+ +SR H ++ +P S + WR+DKD IM+
Sbjct: 859 -LDGKNLLVHVSRATVRKIEHGLITIKSWQGIPSIVKSGQSVVGKDYTWRLDKDAIMSGL 917
Query: 893 SVMRYNLVQLFLQS-----------AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
+ NLVQLF+ A +L+R + R D+ V +Q +L +
Sbjct: 918 RRAKENLVQLFIGPPPEVISQGTVIANRPELQRCRDCAKDDRDDT--VAAQGQSLLDAFF 975
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
E LN DQ+RA+ +VL++ DYAL+LGMPGTGKT+T+ + V+ LL G S+L+TSYT+SAV
Sbjct: 976 E--LNIDQQRAVQRVLSSLDYALVLGMPGTGKTATIAYTVRVLLFLGFSVLVTSYTHSAV 1033
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM----NINSVEEIKKRLDQVKVVAVT 1057
DNLL+KL + +RIG VH I L I SV ++ ++ + ++V T
Sbjct: 1034 DNLLLKLLAYKTPMLRIGNTAQVHPMISDFTLDRQAGREGIFSVRAMEAKMVRAQLVGCT 1093
Query: 1058 CLGI-TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
CL + ++ L T ++FD CI+DEA Q T P+ L L A FVLVGDHYQLPPLV + +AR
Sbjct: 1094 CLSVNSHVLFTKRRFDFCIVDEATQITQPIVLSALRCADTFVLVGDHYQLPPLVANAQAR 1153
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK- 1175
+ GM++SLFRRL+E HP+A L QYRM + IM L+N L+YGD+L CGS ++A+ +K
Sbjct: 1154 KEGMDVSLFRRLAEAHPEATQQLSYQYRMNRHIMLLANRLVYGDKLKCGSFKVASNHLKP 1213
Query: 1176 ----VSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD-----------HQTLNNPVE 1220
+ W L + V F++TD + + + + N VE
Sbjct: 1214 RWQRQDTIGQKLRWPMRVLTNNQGVTFLDTDSMGEATTESSSIAQVGAISGRRRMENVVE 1273
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-------------VSSVEIHT 1267
A +IA + + LV + +I +I+P+ SQ LI L+ + S+E+ T
Sbjct: 1274 AQVIAGLVELLVLGSVSPDEIAVISPFRSQVALIHQHLTAIGALRRAGGSDWIHSIEVST 1333
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS-K 1326
IDKYQG+DK ILVSFVR +E LL DW RINVALTRAK+KLI+VGS TLS
Sbjct: 1334 IDKYQGKDKGVILVSFVRCNEE--KHVGELLTDWRRINVALTRAKQKLILVGSESTLSGG 1391
Query: 1327 VPLLKLLINKVGEQ 1340
L +L+N + +Q
Sbjct: 1392 GALFHVLLNVIKDQ 1405
>gi|58267738|ref|XP_571025.1| DNA replication helicase dna2 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134112295|ref|XP_775123.1| hypothetical protein CNBE3970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257775|gb|EAL20476.1| hypothetical protein CNBE3970 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227259|gb|AAW43718.1| DNA replication helicase dna2, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1097
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 345/1059 (32%), Positives = 540/1059 (50%), Gaps = 141/1059 (13%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-----EFDDQGKCDVGRENNFLI 446
K L + G VHL + W T + GD +N++ + + FLI
Sbjct: 10 KTLVVTLTDGGARGVVHLKDRWADTEVRKGDIINIVSPLLATQTTKPISVTFKDPSTFLI 69
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEI---- 501
HPD++++ T +A + CPR+ V+ ++ LL GTLLH + Q L+++
Sbjct: 70 HHPDLMITMTSIANAMPCPRKPVIQSLIRTPGPPTKPLLYGTLLHSLLQGALLQQDFGAD 129
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
T + L+ A L + +++ + D+ + E K +F + P
Sbjct: 130 GTFRRLD--AELKKDEIKLEIWSTDMGILDVRE---EVGVKAGRGFEVFGERYITKDPKP 184
Query: 562 DF-----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM---- 612
+ D L I+ + ++EE W+PK+GLKG +DAS++ KI R+ ++G
Sbjct: 185 EGELHSSAGDQPALLAINGLHEVEEDIWSPKWGLKGKMDASVQAKI--IRDPLHGTQVEE 242
Query: 613 -ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYY----------LQS 661
+ P E KTG+ M HRAQ +LYTLLM +RY + +GLLYY +
Sbjct: 243 HVAPFEIKTGR---SVGVMAHRAQTMLYTLLMEDRYGVPVPAGLLYYSALDTILRVEAKQ 299
Query: 662 DQTQGVMVQRSDLVGLIMRRNEFAN---------DIIKASTTQQ---------------- 696
++ + +++ R++L + ++ + +I++ ++
Sbjct: 300 NEIRALIMARNELAMYMSKQRKIPKHLPEGDRPVEILRGGVVKKEMVKEEKREEELEAEV 359
Query: 697 ----LPPMLRAYGGNKECSG---------------------LGNMFDSHIYHLTTAHCSF 731
LPP + K C + +++ H H+T F
Sbjct: 360 EEAFLPPTIDNMRDCKMCYAVESCMLYRKAIDKIPQDPEDPIAELYEEHTGHMTEKDAEF 419
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDA-SNEHQKSY-RDNRFV 789
+ WD L+ +E ++ ++++W C S +++++ SN+ KS + +R
Sbjct: 420 YKKWDTLVTVEEQDTVKFRSQLWTMTAKQREKNGKCFSDMIIESYSNDLGKSLAKIHRHS 479
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
Y F+R +P+ + + SL+ I GD V LS E D L + G +T++
Sbjct: 480 YTFIR----APSAISENTTSLLSGHIA---------KGDPVSLSIEPDLLCMWRGFVTDL 526
Query: 850 SRFHVSVSFS------KPLRLPGRN----SSSDADSLLHEVWRIDKDEIMTSFSVMRYNL 899
++ V+V+ + L+ GR +SD S V+RIDKDE+ + MR NL
Sbjct: 527 TQTSVTVAVTYVINTDALLKRTGREHRVLRASDGQSQDKVVFRIDKDEMASGMMRMRNNL 586
Query: 900 VQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
QLF ++ ++ RR+IVD AP F+ S P S I SLN DQ++A+ VLTA
Sbjct: 587 AQLFYKNGDEAR-RRLIVDQAAPEFEP----SWRPEPSEI--PPSLNSDQQKAMESVLTA 639
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
+DY+LILGMPGTGK++T+ +KAL+ RG ++LLTSYT+SAVD +L+KL +R+G
Sbjct: 640 RDYSLILGMPGTGKSTTIAETIKALVARGRTVLLTSYTHSAVDAILMKLTDAEFGVLRLG 699
Query: 1020 RHEVVHKEIQKHCLSAMNINS-VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ VH ++Q L A ++ ++++ RL VVA TCL I +PL ++FD CI+DE
Sbjct: 700 NIDKVHPDVQHLTLEAYEASANMDQLNARLMTPPVVAATCLAIDHPLFFRRRFDYCIVDE 759
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q TLP +GPL A KFVLVGDHYQLPP+V+ EAR G+++SLFR LS HP A+
Sbjct: 760 ASQITLPTCIGPLRMADKFVLVGDHYQLPPIVRHAEARRGGLDVSLFRHLSAAHPSAVVD 819
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-------------- 1184
L QYRM + IM LSN L+Y RL CG++++A + +K+ C
Sbjct: 820 LSYQYRMNEDIMALSNKLVYEGRLKCGNEQVAQSGLKLRSRKRCKEIFGDAGCTCDQGKG 879
Query: 1185 -WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
W+++ L +F++TD +PA +++ + N +EA L+ +++ LV + + +DI I
Sbjct: 880 CWIQDLLEESAKCVFIDTDGVPALDSRVGDLVQNEIEAKLVQQLSTALVASGVRQEDIAI 939
Query: 1244 ITPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY Q L+ L + VEI T DK QGRDKDCILVS VRS+E+ LL DW
Sbjct: 940 ITPYRQQIKLLSSYLKPIPRVEILTADKSQGRDKDCILVSLVRSNES--GNIGDLLRDWR 997
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
RINV+ TRAKKKL++ S +TL+ PL K + V E+
Sbjct: 998 RINVSFTRAKKKLVIFASAKTLNADPLFKEFLELVREKG 1036
>gi|328354481|emb|CCA40878.1| DNA replication ATP-dependent helicase Dna2 [Komagataella pastoris
CBS 7435]
Length = 1413
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 328/993 (33%), Positives = 523/993 (52%), Gaps = 96/993 (9%)
Query: 404 ERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFS 463
+R + + + W I GD +++IG+ D D + N LI +PD+L+S T V+ S S
Sbjct: 397 QRNIVIRDFWAELDIEEGDVIHIIGK--DPSLTD--KRTNILIWNPDLLLSSTLVSESIS 452
Query: 464 CPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESL 522
C RRS L +L E SI ++G ++H +FQ L T F+ L N+ S+
Sbjct: 453 CKRRSFLKNKLTFPGESSIPLIVGVIVHTVFQQCLAAGNITDDFISTLIESELNANLFSI 512
Query: 523 YACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL-KISEVTDIEE 581
++ + + + + E +P + W + S ++ + G K + S + DIEE
Sbjct: 513 FSINESRETVREKIQEHVPFIKQWHDTYTRSIPVSKSSTAIGGTKDKAMVSASNILDIEE 572
Query: 582 MAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTL 641
W+P +GL+G+ID ++ I+ N+ ++PLE KTG + + HRAQV LY+L
Sbjct: 573 NIWSPVFGLRGLIDVTVEACIKGPNND-GRFVVPLELKTG----SREYISHRAQVSLYSL 627
Query: 642 LMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML 701
L+ ERY D L + + Q +++ DL ++ RNE + + + +LPP++
Sbjct: 628 LVRERYDIDSDYFFLVFTKLKSVQLHNIKQHDLRLIVQLRNELSGYLKLTNGLNKLPPLI 687
Query: 702 RAYGGNK-----ECSGLGNMF------DSHI----YHLTTAHCS------FLRHWDRLID 740
+ ++ C L + DS I Y L T+H F + W LID
Sbjct: 688 KQSECDRCDVLVPCMALNKLIENGTSEDSGILEQKYELLTSHLDKEEYKFFFKKWVGLID 747
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPS 799
E+ + +++ +IW + G CL + + E S + R+V
Sbjct: 748 KESLTLDMLQRQIWTLTATEKEQNGGTCLGGLEIIEMEESSVSNYNYRYVL--------- 798
Query: 800 PNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFS 859
N + + ++ + +A +K D +++S E A+A G I I+ V +
Sbjct: 799 -NRDCNSSNAPLTSAQFSK--------YDRILVSDEEGHYALAVGCIDLITPTTVIIRTD 849
Query: 860 K-----PLRLPGRN-----------SSSDADSLLHEV----WRIDKDEIMTSFSVMRYNL 899
+ L+LPG N S D + L EV +RIDK+E ++ R+N+
Sbjct: 850 RRIVNSSLKLPGFNARNNQTFQSVLSKRDFEMLPAEVKNKTFRIDKNEFYNGLALARFNI 909
Query: 900 VQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
+ LFL + RRM+V+L+AP F S P + S N DQ A+ K L
Sbjct: 910 LNLFLPEYGDEKRRRMVVELKAPSF------SNKPLPYNVSKLGSFNPDQLAAVKKALCT 963
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
+DY+LILGMPGTGKT+ + ++ ++ G S+LLTS+T+SAVD++L+KL IDF R+G
Sbjct: 964 EDYSLILGMPGTGKTTVIAQIIRIMVANGKSVLLTSHTHSAVDSILLKLLDDGIDFYRVG 1023
Query: 1020 RHEVVHKEIQKHC---LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
+H ++K + ++NS+E+ ++ + Q VVA TC+G+ + + + FD CI+
Sbjct: 1024 SEAKIHPLVRKFMPQKRGSADMNSIEDFQRMIHQAPVVAATCMGVGDLVFNYRTFDYCIV 1083
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI 1136
DEA Q ++P LGPL F KF+LVGDH+QLPPLV++ EAR G++ SLF+ LSE+HPQ++
Sbjct: 1084 DEASQVSMPFCLGPLRFCDKFILVGDHFQLPPLVKNPEARNQGLDRSLFKILSEKHPQSV 1143
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD--------LSSCSP---- 1184
+L QYRMC +M LSN LIY +RL CGSD +A +++ L +P
Sbjct: 1144 VSLSYQYRMCADVMLLSNKLIYENRLKCGSDNVAQRSLRIPMKERLDHLLLDPSTPKNRL 1203
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WL VIF++ D +PA E ++NP EA L+ +I L+ + K+IG++
Sbjct: 1204 WLHHIFVEENRVIFLDHDDVPAKERMSTDRVDNPTEAELVGQIVDSLINCGCDSKEIGVM 1263
Query: 1245 TPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+ Y +Q L++ L V +VE+ T D++QGRDK+CI++S VRS N N +LL +W
Sbjct: 1264 SFYRAQVKLMKTRLVSHVQNVEVMTADQFQGRDKECIIISLVRS--NATNSVGNLLKEWR 1321
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RINVA+TRAK KL+++GS +TL ++ LK ++
Sbjct: 1322 RINVAITRAKSKLLILGSRKTLEQLETLKAFLS 1354
>gi|327277984|ref|XP_003223743.1| PREDICTED: DNA2-like helicase-like [Anolis carolinensis]
Length = 1099
Score = 511 bits (1315), Expect = e-141, Method: Compositional matrix adjust.
Identities = 344/990 (34%), Positives = 528/990 (53%), Gaps = 110/990 (11%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ GE G + E+ +LI++PD+L+SGT V+ S C RR+
Sbjct: 102 LRNDWVSIPVQPGDIIHLEGECSS-GVWVIDAESGYLILYPDILLSGTTVSNSIRCMRRA 160
Query: 469 VLDERL-KCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
+L E+ KC S + L+GTLLH+IFQ M T + L E A VLQ + ++ LY
Sbjct: 161 ILSEKFRKCESGSRAMLIGTLLHEIFQKAGMNF--TQEKLNEIAFSVLQGPEYLKELYQL 218
Query: 526 GVNENDIHKTLVEAIPKMLNWI--ILFKDSQ------DLNTPTVDFGSDGLKKLKISEVT 577
+N+ND+ + + E P W ++ + Q N D LK++E+
Sbjct: 219 NLNQNDVMEEIQEYFPSFTKWAEEFMYTNHQANQHNFQHNLQLKLNEDDSFCNLKVTEIL 278
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
D+EE W P++GLKG ID ++ V I R++ I+PLE K+GK N S+EHR+QV+
Sbjct: 279 DVEENIWCPRFGLKGKIDVTVGVTIHH-RSKTQSKIMPLELKSGKESN---SIEHRSQVV 334
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LY+LL + ++GLL YL++ V R D LI RN+ A + + K+ T
Sbjct: 335 LYSLLCQGKRADP-EAGLLLYLKTGNMFPVPGNRMDRRELIKLRNQLAFYLLHSLRKSDT 393
Query: 694 TQQ------LPPMLRAYGGNKECSGLGNMF----------------------DSHIYHLT 725
+Q LPP++ + CS N + HL
Sbjct: 394 GRQQTQLASLPPLISDSQTCRCCSQKQNCLLYSRAVEQQSNVLIPPDVVSAIEKETQHLK 453
Query: 726 TAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
+H + W ++ LE+ K+ + IW + C+ S+V + +
Sbjct: 454 PSHLEYFHLWYLMLTLESESKDGRKGHRNIWMMSAAEREKHGDCIGSMV---QMKCVQEV 510
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTE-SDRLAVA 842
D ++++ F R++ ++P L GD V++S+E + L ++
Sbjct: 511 TDGQYLHWFQRKN----------------GSVPVT----ILMVGDRVVVSSEDTALLGLS 550
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
+G + E++R +S + L +++ V+R+D DE + NL +L
Sbjct: 551 TGYVQEVNRTKISCLLDRNLSHLPKDT----------VFRLDHDEGVYGIDAPLGNLSKL 600
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
S S +LR +I+D P+F SV + + K LN Q++A+ +VL +K
Sbjct: 601 MDNSPASERLRNLIIDFHKPQFVQHLSSVLPPEAKETVANILKGLNKPQKQAMKQVLLSK 660
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
DY LI+GMPGTGKT+T+ V+ L G S+LLTS+T++AVDN+L+KL + F+R+GR
Sbjct: 661 DYTLIVGMPGTGKTTTICALVRILYACGFSVLLTSFTHTAVDNILLKLARFKVGFLRLGR 720
Query: 1021 HEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
+ VH +I+K C S I +V +++K VVA TC+G +P+ T K+FD CI
Sbjct: 721 AQKVHPDIRKFTEEEICKSNC-IKTVADLEKLYHSQPVVATTCMGTNHPIFTRKRFDFCI 779
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q + P+ LGPL ++ +FVLVGDH QLPPLVQ+ EAR+ GM SLF+RL E++ A
Sbjct: 780 VDEASQISQPICLGPLFYSLRFVLVGDHQQLPPLVQNAEARDLGMGESLFKRL-EKNENA 838
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA--------KIKVSDLSSCSPWLK 1187
+ L QYRM + IM LSN L+Y +L GS+ I+ A ++K+ WLK
Sbjct: 839 VVQLTVQYRMNRKIMSLSNKLVYDGKLESGSERISKAVIDLPKFKELKLEQQYPSKTWLK 898
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
E L+P PV F+NT+ +PA E + ++N EA L+ +T +K DIG+I+PY
Sbjct: 899 ETLDPNNPVCFLNTEKIPAPEQIEKHGVSNMTEARLVLFLTSMFIKAGCRPSDIGVISPY 958
Query: 1248 NSQANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
Q +I ++ +S VE++T+DKYQGRDK I+VSFVRS+ + + LL DW R+
Sbjct: 959 RHQLKVITDLMTSSQISKVEVNTVDKYQGRDKSIIIVSFVRSNSDGK--PGELLKDWRRL 1016
Query: 1305 NVALTRAKKKLIMVGSCRTLSK-VPLLKLL 1333
NVA+TRAK KL+M+G +L + +PL KLL
Sbjct: 1017 NVAITRAKHKLVMLGCVPSLCQYIPLKKLL 1046
>gi|255588743|ref|XP_002534704.1| DNA replication helicase dna2, putative [Ricinus communis]
gi|223524726|gb|EEF27678.1| DNA replication helicase dna2, putative [Ricinus communis]
Length = 320
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 237/298 (79%), Positives = 270/298 (90%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+DQVKVVAVTCLG+T+PLL +KKFDVCIMDEAGQ TLP+SLGPLMF SKFVLVGDHYQLP
Sbjct: 1 MDQVKVVAVTCLGVTSPLLANKKFDVCIMDEAGQITLPISLGPLMFTSKFVLVGDHYQLP 60
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
PLVQSTEA+ENGM ISLF RLSE HPQAISALQSQYRMCQGIMELSN+LIYGDRL CGS
Sbjct: 61 PLVQSTEAQENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMELSNSLIYGDRLRCGSS 120
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
EIANAK+K S L SCS WL+E L+P R V+F+NTDMLPA+EAKD + +NNP EA ++A++
Sbjct: 121 EIANAKLKFSSLKSCSSWLREILDPSRSVVFINTDMLPAFEAKDSKAVNNPTEAYIVAEV 180
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
T+EL+K+ I+G+DIGIITPYNSQANLIR ++ SVE+HTIDKYQGRDKDCILVSFVRSS
Sbjct: 181 TKELIKSGIQGEDIGIITPYNSQANLIRTAVGTISVEMHTIDKYQGRDKDCILVSFVRSS 240
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
ENPRNC SSLLGDWHRINVALTRAKKK+IMVGSC+TLS VPLLKL++ K+ EQSG+LN
Sbjct: 241 ENPRNCKSSLLGDWHRINVALTRAKKKMIMVGSCKTLSSVPLLKLMMGKIEEQSGMLN 298
>gi|348534058|ref|XP_003454520.1| PREDICTED: DNA2-like helicase-like [Oreochromis niloticus]
Length = 1413
Score = 509 bits (1312), Expect = e-141, Method: Compositional matrix adjust.
Identities = 337/1003 (33%), Positives = 530/1003 (52%), Gaps = 106/1003 (10%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L + W T + PGD V++ G D G V RE FL++ PD L+SGT +++S C RR+
Sbjct: 426 LRDGWEMTPVRPGDVVHLEGR-SDGGSWLVDREQGFLVLLPDSLISGTSISSSIRCMRRA 484
Query: 469 VLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL + K + +L GT++H++FQ + +++ L + A L + + +Y+
Sbjct: 485 VLGDMFKSFDGGSKQMLNGTMVHEVFQRAATAKDFSLETLSKLADEALHSPRYLGDMYSL 544
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLK-------ISEVTD 578
GV + ++ + L + +P + +W + +SQ ++ + + ++E+ D
Sbjct: 545 GVTQEEMKQELHDYLPSLEHWAKEYLNSQTPKAISLKISGGAPSRCQDSGAVATVTELAD 604
Query: 579 IEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM----ILPLEFKTGKIPNGQSSMEHRA 634
IEE W+P++GLKG ID + RV+I+ RN + + +PLE KTG+ N S+EHR+
Sbjct: 605 IEENVWSPRFGLKGKIDVTARVRIQRPRNGFHRIPEEKTIPLELKTGRESN---SIEHRS 661
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI------ 688
QVILYTL+ SERY + ++G L YL++ V D L+ RN + I
Sbjct: 662 QVILYTLMTSERY--NPEAGFLLYLKTGNMHPVAPSHMDRRELLKLRNTLVHHIHSCVEK 719
Query: 689 -IKASTTQQLPPMLRAYGGNKECSGLGN---------------------MFDSHIYHLTT 726
+ S +LP +L + C N HLT
Sbjct: 720 EAERSCLSRLPDILTNRQTCQYCPQKRNCALYERAVDRSSAVTEDVIHEFIQQETGHLTL 779
Query: 727 AHCSFLRHWDRLIDLEAKEMQV--VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
H ++ HW L LE+ M+ + +W C ++ L Q
Sbjct: 780 PHLNYFSHWLLLCCLESVTMETRNSRKRVWLQTVEESEKSGSCAGNLQLSGPVIAQS--- 836
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVAS 843
+ F++ F R H+ S + +L S D +++S RL +A+
Sbjct: 837 EGVFLHRFHRSHVASQQ----------------GLTNSSLSSRDRIVVSDLEGRLVGLAT 880
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G + E+S+ +S + + D +R+D DE + FS NL +L
Sbjct: 881 GYLCEVSQTAISCTLDR-----------DLSKFRGVTFRLDGDEGVVGFSTHLTNLSKLM 929
Query: 904 LQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
S S +LR +++DL+AP F S SV ++ + K LN Q++A+ KVL +KD
Sbjct: 930 ENSQDSDRLRELVIDLQAPEFISNLSSVLPREAKDTVADILKGLNKPQKQAMKKVLLSKD 989
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
Y L++GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KLK + F+R+G+
Sbjct: 990 YTLVVGMPGTGKTTTICTLVRILHACGFSVLLTSYTHSAVDNILLKLKRFRVGFLRLGQG 1049
Query: 1022 EVVHKEI---QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ VH +I + + ++++ ++++ ++ +VA TC+GI +P+ T ++FD CI+DE
Sbjct: 1050 QKVHPDILPYTEESVRKKGVHTLSDLEQLYNKELIVATTCMGIKHPIFTRRRFDFCIVDE 1109
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + P+ LGPL +A +FVLVGDH QLPP+VQ+ EAR GM+ SLF+RL E H +A+
Sbjct: 1110 ASQISQPICLGPLFYAKRFVLVGDHQQLPPIVQNHEARSLGMDESLFKRL-ELHSEAVVQ 1168
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-------SDLSSCS-------- 1183
L QYRM + IM LSN+L+Y RL CGS+ A A + + S+LSS S
Sbjct: 1169 LNVQYRMNRQIMSLSNSLMYDGRLECGSERTATALLTLPFLLSVQSELSSYSEAHPQHDL 1228
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
W++ L P PV F++ M+PA E+ + ++N EA LI + L+K + DIG+
Sbjct: 1229 SWIQSTLLPSNPVCFLDCSMVPALESVEQGGISNHTEAALIHTLLSLLIKAGCKPSDIGV 1288
Query: 1244 ITPYNSQANLI---RHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
I PY Q I S + + VE++T+D+YQGRDK I++SFVRS+ N LL D
Sbjct: 1289 IAPYRQQLKTILALLQSPAFTGVEVNTVDRYQGRDKSLIILSFVRSTAEEGNL-GELLKD 1347
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
W R+NVA+TRAK KL+MVGS TL + ++ L+N + +++ I
Sbjct: 1348 WRRLNVAITRAKHKLLMVGSATTLRRYTPVEKLLNHLQQENMI 1390
>gi|405120911|gb|AFR95681.1| DNA replication helicase dna2 [Cryptococcus neoformans var. grubii
H99]
Length = 1384
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 349/1043 (33%), Positives = 521/1043 (49%), Gaps = 162/1043 (15%)
Query: 400 QSGEERAVHLWEDWFHTVIAPGDTVNVIG-----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+ G VHL + W T + GD +N+I + + FLI HPD++++
Sbjct: 337 EGGARGVVHLKDRWADTEVRKGDIINIISPLLATQTTKPISVTFKDPSTFLIHHPDLMIT 396
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEI----PTMKFLEE 509
T +A + CPR+ ++ ++ LL GTLLH + Q L+++ T + L+
Sbjct: 397 MTSIANAMPCPRKPIIQSLIRTPGPPTKPLLYGTLLHSLLQGALLQQDFDAGGTFRRLD- 455
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVD-----FG 564
A L + +++ + D+ + E K +F + P +
Sbjct: 456 -AELKKDEIKLDIWSTDMGILDVRE---EVGVKAGRGFEVFGERYITKDPKPEGELHSSA 511
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM-----ILPLEFK 619
D L I+ + ++EE W+PK+GLKG +DAS++ KI R+ ++G + P E K
Sbjct: 512 GDQPALLAINGLHEVEEEIWSPKWGLKGKVDASVQAKI--IRDPLHGSQAEEHVAPFEIK 569
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TG+ M HRAQ +LYTLLM +RY + +GLLYY D V +++++ LIM
Sbjct: 570 TGR---SVGVMAHRAQTMLYTLLMEDRYGVPVPAGLLYYSALDTILRVEAKQNEIRALIM 626
Query: 680 RRNEFAN-------------------DIIKASTTQQ--------------------LPPM 700
RNE A +I++ S ++ LPP
Sbjct: 627 ARNELAMYISKQRKVPKHLPEGNRPVEILRKSVVKKEMLKEEKREEKLETEVEEAFLPPT 686
Query: 701 LRAYGGNKECSG---------------------LGNMFDSHIYHLTTAHCSFLRHWDRLI 739
+ K C + +++ H H+T F + WD L+
Sbjct: 687 IDNMRDCKMCYAVESCMLYRKVIDKVPQDPEDPIAELYEEHTGHMTEKDAEFYKKWDTLL 746
Query: 740 DLEAKEMQVVKNEIWC----SRGSGGNHFTGCLSSIVLDASNEHQKSY-RDNRFVYHFVR 794
+E ++ ++++W R G+ I+ SN+ KS + +R Y F+R
Sbjct: 747 TVEEQDTVKFRSQLWTMTAKQREKNGSDM------IIESYSNDLGKSLAKIHRHSYTFIR 800
Query: 795 QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHV 854
+P+ + + SL+ I GD V LS E D L R H
Sbjct: 801 ----APSAISENTTSLLSGHI---------AKGDPVSLSIEPDLLW----------REHR 837
Query: 855 SVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRR 914
+ +SD S V+RIDKDE+ + MR NL QLF ++ ++ RR
Sbjct: 838 VL------------KASDGQSRDKVVFRIDKDEMASGMMRMRNNLAQLFYKNGDGAR-RR 884
Query: 915 MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKT 974
+IVD AP F+ S P S I SLN DQ++A+ VLTA+DY+LILGMPGTGKT
Sbjct: 885 LIVDQAAPEFEP----SWRPEPSEI--PPSLNSDQQKAMESVLTARDYSLILGMPGTGKT 938
Query: 975 STMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
+T+ +KAL+ RG S+LLTSYT+SAVD +L+KL +R+G + VH ++Q L
Sbjct: 939 TTIAEIIKALVARGKSVLLTSYTHSAVDAILMKLADAEFGVLRLGNIDKVHPDVQHLTLE 998
Query: 1035 AMNIN-SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
A + S++++ RL VVA TCL I +PL ++FD CI+DEA Q TLP +GPL
Sbjct: 999 AYEASASMDQLNARLMTPPVVAATCLAIDHPLFFRRRFDYCIVDEASQITLPTCIGPLRM 1058
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A KFVLVGDHYQLPP+V+ EAR G+++SLFR LS HP A+ L QYRM + IM LS
Sbjct: 1059 ADKFVLVGDHYQLPPIVRHAEARRGGLDVSLFRHLSATHPSAVVDLSYQYRMNEDIMALS 1118
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSP---------------WLKEALNPCRPVIF 1198
N L+Y RL CG++++A + +K+ C W+++ L +F
Sbjct: 1119 NKLVYEGRLKCGNEQVAQSGLKLRSRKRCKEIFGDAGCTCDQGKRCWIQDLLEESAKCVF 1178
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
++TD +PA +++ + N EA L+ +++ L+ + + +DI IITPY Q L+ L
Sbjct: 1179 IDTDRIPALDSRVGDLVQNETEAKLVQQLSTALIASGVRQEDIAIITPYRQQIKLLSSYL 1238
Query: 1259 S-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+ VEI T DK QGRDKDCILVS VRS+E+ LL DW RINV+ TRAKKKL++
Sbjct: 1239 KPIPRVEILTADKSQGRDKDCILVSLVRSNES--GNIGDLLRDWRRINVSFTRAKKKLVI 1296
Query: 1318 VGSCRTLSKVPLLKLLINKVGEQ 1340
S +TL+ PL K + V E+
Sbjct: 1297 FASAKTLNADPLFKEFLELVREK 1319
>gi|331231179|ref|XP_003328253.1| hypothetical protein PGTG_09547 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309307243|gb|EFP83834.1| hypothetical protein PGTG_09547 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1326
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 359/1085 (33%), Positives = 538/1085 (49%), Gaps = 183/1085 (16%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-------EFD-DQGKCDVGRENN 443
+V +L + + + L ++W + G+ +N++ F D +
Sbjct: 154 RVEVVLKSDDNQHKTLVLCDEWTELSLDQGNPLNIVSFPGSPPINFQLDPLVFSRAEPGH 213
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL--GTLLHQIFQAGLMK-- 499
LI+ P +L+S T V+ + C RRSVL RLK S I + G ++H++ Q L+
Sbjct: 214 VLILFPSLLISATVVSNAPFCSRRSVLSTRLKISSTEIGEPIVRGNIVHEVIQNSLLPTQ 273
Query: 500 ---------------EIP---TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIP 541
IP + L E AR +++ L+ G + ++ K + E +
Sbjct: 274 EEEEDQSNPALQPTPSIPDTWEITRLSEEARKACIRHLSDLFMIGKSADEGVKMVSEHLQ 333
Query: 542 KMLNW-------------IILFKDSQ--DLNTPTVDFGSDGLKKLKISEVTDIEEMAWAP 586
++ +W IIL KD+ D + T G D ++ I+ V D EE W+P
Sbjct: 334 QLPSWSKKYLINRKENGKIILNKDALLIDPRSNTQPGGDD--PRIGITGVLDTEEEIWSP 391
Query: 587 KYGLKGMIDASIRVKIESKRNEI--------NGMILPLEFKTGKIPNGQSSMEHRAQVIL 638
KYGLKG ID +++ + K + I N I PLE KTG+ P+G +EH AQ +L
Sbjct: 392 KYGLKGKIDVTVQAHVIEKSSSIKNHCFDLSNLQIFPLEIKTGRQPSG---IEHIAQTML 448
Query: 639 YTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN------------ 686
YTLL+S+RY I +GLL+Y D V V + +L L+M RN A
Sbjct: 449 YTLLLSDRYNLDITAGLLFYTSRDDLIRVRVVKDELRHLVMARNRLARFMHSEPSYSPEI 508
Query: 687 --------DIIKASTTQQLPP----MLRAYGGNKEC------------------------ 710
+ ++ T LPP + ++ C
Sbjct: 509 ALPDPTDLEDLEDLTVCDLPPDNPILPEPIDNDRACCRCFEVEGCMLYRKTVEQVDSIPP 568
Query: 711 ----SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG 766
L +++ HLT H F R W+ L+ E KE+ +K +IW
Sbjct: 569 QKGIDRLRELYERKTSHLTPVHTEFFRRWEALVSHEEKELGKLKKQIWTMSADEREQTGN 628
Query: 767 CLSSIVLDASNE--------------HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIG 812
L+++V+D + + H+ +YR RF Q +P+ + L G
Sbjct: 629 TLANMVIDYTFDVNDGSYDPTSMTKIHRHTYRLKRF------QTIPNSTPDDDKASLLFG 682
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR----LP-GR 867
+ D V++S E +LA+A G I +++ ++V L LP G
Sbjct: 683 H----------MSKHDPVVISIEKKKLAIARGFILDLTPTTMTVGLDHRLEEIGPLPVGT 732
Query: 868 NSSS------------DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRM 915
N ++ + SL+ +R+DKDE++ +R NL QLFL++ S QLR +
Sbjct: 733 NLAAFLTHYASTQPHGSSASLVR--YRVDKDELLAGMGKIRDNLAQLFLENGHS-QLREL 789
Query: 916 IVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
+VDL PRFDS ++ + L+ LN++Q + KVLTAKDYAL+LGMPGTGKT+
Sbjct: 790 VVDLRKPRFDSSNIET----LTENNRAAHLNEEQVGVLTKVLTAKDYALVLGMPGTGKTT 845
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA 1035
T+ +K L+ G ++LLTSYT+SAVDN+L KL ID +R+G + V +++ L
Sbjct: 846 TIAELIKTLIGMGKTVLLTSYTHSAVDNILSKLVDSKIDMLRLGNVDKVSSALRRFTLHE 905
Query: 1036 MNIN-SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
+ + ++E ++K+L +VA T L I +PL T + FD CI+DEA Q TLP LGPL A
Sbjct: 906 SDPSQTMEALEKKLMSPPLVATTSLSINHPLFTRRSFDYCIVDEASQVTLPTCLGPLRHA 965
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
+ FVLVGDHYQLPPLV++ +A+ G+E SLF+ L+E HP A+ +L QYRM + IM LSN
Sbjct: 966 NVFVLVGDHYQLPPLVKNQKAKTGGLETSLFKLLTEAHPDAVVSLTMQYRMNEDIMSLSN 1025
Query: 1155 ALIYGDRLSCGSDEIANAKIKV-----------SDLSSC--SPWLKEALNPCRPVIFVNT 1201
ALIY RL I++ +++ D + C + W+ + + P R V+F NT
Sbjct: 1026 ALIYEGRLRSADQRISDLGLEIPLGVVTDSFHKDDPTECRDACWISDLIQPSRKVVFANT 1085
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
D+L E+K L N EA L ++ LV+ + +IGII PY Q L+ SLS +
Sbjct: 1086 DLLHGKESKMGNQLQNEAEAYLALQLVNALVERGVPASEIGIIAPYRQQIKLLT-SLSHA 1144
Query: 1262 --SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+EI T DK QGRDKDCI++S VR+ N LL DW RINV LTRAK+KL++ G
Sbjct: 1145 HPELEILTADKSQGRDKDCIIMSMVRN--NAEEEVGELLKDWRRINVCLTRAKRKLVLFG 1202
Query: 1320 SCRTL 1324
S +TL
Sbjct: 1203 SKQTL 1207
>gi|354477694|ref|XP_003501054.1| PREDICTED: DNA2-like helicase [Cricetulus griseus]
Length = 1080
Score = 506 bits (1302), Expect = e-140, Method: Compositional matrix adjust.
Identities = 353/1024 (34%), Positives = 530/1024 (51%), Gaps = 131/1024 (12%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLV 453
EQ +E + L W + PGD +++ +G C + + + I++PD+L+
Sbjct: 92 EQDHKELCI-LRNGWCSVPVEPGDIIHL------EGNCASDMWIIDDDFGYFILYPDILI 144
Query: 454 SGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYAR 512
SGT VA+S C RR+VL E + S+ + +L GT+LH++FQ + + K L E A
Sbjct: 145 SGTSVASSIRCMRRAVLSETFRVSDPATRQMLVGTILHEVFQKAISESFAPEK-LPELAF 203
Query: 513 LVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT------VDFG 564
LQ ++++ +Y ++ +++ + E +P W +D PT +
Sbjct: 204 QTLQEVRHLKEMYRLNLSPDEMKCEVEEYLPSFSKWA---EDFMRKGPPTEFPQMQLSLP 260
Query: 565 SDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
SDG + +++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE K
Sbjct: 261 SDGSNRNSSCNIEVIKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDYKTKYKIMPLELK 319
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK N S+EHR+QV+LYTLL ER ++G L YL++ Q V R D L+
Sbjct: 320 TGKESN---SIEHRSQVVLYTLLSQERR-DDPEAGWLLYLKTGQMYPVPANRLDKRELLK 375
Query: 680 RRNEFANDII-KASTTQQ--------LPPMLRAYGGNKECSGLGNM-------------- 716
R++ A ++ + S T LP ++ K CS +GN
Sbjct: 376 LRDQLAFSLLHRVSRTASGEETRLSPLPQIIEEEKTCKYCSQMGNCALYSRAVEEQVDDT 435
Query: 717 ---------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRGSGGNHFT 765
HL H + W ++ LE+ K+ + IW
Sbjct: 436 SVPEGMLSKIHEETRHLKPTHLKYFSLWCLMLTLESQSKDNRKSHQNIWLMPAPKMEEVG 495
Query: 766 GCLSSIVLDASNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCT 823
C+ ++V E + D +++++F R++ MP+ NL A
Sbjct: 496 NCIGNLV---QTEPVRRVCDGQYLHNFHRKNGAMPATNLMA------------------- 533
Query: 824 LRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
GD +ILS E +L A++ G + EI+ V+ L RN S+ D+ L +R
Sbjct: 534 ---GDRIILSGEDRKLFALSKGYLKEINEVAVTC-------LLDRNLSTLPDTTL---FR 580
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIW 940
+D++E NL +L + S +LR +I+D + P+F SV D +
Sbjct: 581 LDREEKNCEIDTPLGNLSKLMENTNISKRLRELIIDFKEPQFVPYLSSVLPHDAKDTVAN 640
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
K LN QR+A+ KVL +KDY L++GMPGTGKT+T+ V+ L G S+LLTSYT+SA
Sbjct: 641 ILKGLNKPQRQAMKKVLLSKDYTLVVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSA 700
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAV 1056
VDN+L+KL I F+R+G+ VH +IQK + +I S+ +++ + +VA
Sbjct: 701 VDNILLKLAKFKIRFLRLGQSHKVHADIQKFTEQEICRSRSIKSLALLEELYNSHLIVAT 760
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR
Sbjct: 761 TCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLVLNREAR 820
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD +ANA I +
Sbjct: 821 ALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDRVANAVITL 879
Query: 1177 SDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
+ S +PWL P PV F+NTD +PA E ++ ++N EA L+
Sbjct: 880 PNFKDVKRSLEFSASYSDNPWLAAVFEPDNPVCFLNTDKVPAPEQTENGGVSNITEARLV 939
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILV 1281
+T +K +IGII PY Q +I L+ SS VE++T+DKYQGRDK +LV
Sbjct: 940 VFLTSVFIKAGCSPSNIGIIAPYRQQLRIINDLLACSSVGMVEVNTVDKYQGRDKSLVLV 999
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
SFVRS N LL DW R+NVA+TRAK KLI++GS +L + P L+ L + + +
Sbjct: 1000 SFVRS--NKDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLQRFPPLEKLFHHLNTEQ 1057
Query: 1342 GILN 1345
I++
Sbjct: 1058 LIVD 1061
>gi|2342691|gb|AAB70418.1| F7G19.26 [Arabidopsis thaliana]
Length = 629
Score = 505 bits (1301), Expect = e-140, Method: Compositional matrix adjust.
Identities = 314/685 (45%), Positives = 401/685 (58%), Gaps = 91/685 (13%)
Query: 1 MPQRKKANSSRKLQSSQP------QPTKFGIQHFFDRHTQNSSKNVDVSSFPQNPNSDLI 54
MP RKK SS + Q QP+ FGIQ F RH QNS + + +P
Sbjct: 1 MPPRKKPKSSALKSNKQSSANHSSQPSTFGIQQLFLRHIQNSQSTSNSHTSTADP----- 55
Query: 55 HSVSSPNCPPFSVYRNPSDSAPSKKNSPQSALENTPPDNILPIDDETNSTHHSPEISKRF 114
V N V SD+A +P N PD +D + T SP+ISK
Sbjct: 56 --VDQQN-----VNGLASDTAVLTPQNPL-GTSNEKPDESKDMDQQL--TEASPKISKNL 105
Query: 115 K-FSPEMLIKLSQYDGGDEVTWNISPVNERLLAVSKQMPPENIRVLANSSRLNSLTIHQC 173
K FSP MLIK SQ D G E+TW ISPVNERL A +K +P + + + NS + S TI C
Sbjct: 106 KRFSPGMLIKQSQDDCGGEITWKISPVNERLRAAAKNIP-KMMDLTENSLGVKSSTIRPC 164
Query: 174 SHNKS------KQ--PSPSPKAINR-SLTTGR--KRVNPCEDANLDGNGNNANYSVSSQQ 222
S NK+ +Q SPS KA R + T R +RVNP DA + N S SS
Sbjct: 165 SLNKACITSKVEQWLSSPSKKASKRPAFATNRVMERVNPSPDAEFE----IVNTS-SSGN 219
Query: 223 SPFRTPPSLSYYHDKLANGVACNGASDHLGLRHTKKVLLQTYDFDDIHCLLLINSILHNT 282
SPF+TPPSLS H+KL V C+GA +G
Sbjct: 220 SPFQTPPSLSCPHNKLPCTVTCSGACGSMG------------------------------ 249
Query: 283 IRFISTWYIPYNLQRSFVCHHKQAFLELLDQVKDAISVDASVSSDKEAYLSKSQDKNGAG 342
HK+A LELLDQV+D I+VD + D + +++ K+
Sbjct: 250 -----------------AGQHKKALLELLDQVEDVIAVDDKTTDDVGIVMPQARVKDDI- 291
Query: 343 MLLEANSVVNGVPTDPPENVNGTS-SCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQS 401
+ + V+ P P+ N + +FLVLEVSEK + PYKVLRLL+E +
Sbjct: 292 ISSVVDCAVDEGPVSLPKMQNSINPDSYFLVLEVSEKRGSGSSSKGQCPYKVLRLLDEHT 351
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAAS 461
G E A++LW++WF++ ++PGD++NVIGEFD GKCDV R+NNFLIVHPD LV+GTRVAAS
Sbjct: 352 GVECALYLWDEWFYSTVSPGDSINVIGEFDGDGKCDVDRQNNFLIVHPDTLVAGTRVAAS 411
Query: 462 FSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES 521
F CPRR+VLDERL+ +E + ALLGTL HQ+FQAGL +E P++ L+EYA V++K+IES
Sbjct: 412 FGCPRRTVLDERLRSNEHATVALLGTLQHQVFQAGLSQESPSVDGLQEYASTVIEKSIES 471
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIE 580
LYACGV+E D+ TL +AIPKMLNWI F+ S+D VDFGS G K +K+SEV DIE
Sbjct: 472 LYACGVHEGDVRSTLFKAIPKMLNWIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEVIDIE 531
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYT 640
EM+WAPKYGLKGMIDAS+RV +ES N +N I+PLEFK+GK P+GQSS+EH AQVILYT
Sbjct: 532 EMSWAPKYGLKGMIDASVRVIVESDMNTVNEKIMPLEFKSGKAPSGQSSIEHSAQVILYT 591
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQ 665
LLMSER L + L ++L + Q
Sbjct: 592 LLMSERCL--CAAFLFFFLLENGQQ 614
>gi|449504703|ref|XP_004176294.1| PREDICTED: LOW QUALITY PROTEIN: DNA replication ATP-dependent
helicase/nuclease DNA2 [Taeniopygia guttata]
Length = 1059
Score = 504 bits (1298), Expect = e-139, Method: Compositional matrix adjust.
Identities = 363/1057 (34%), Positives = 547/1057 (51%), Gaps = 118/1057 (11%)
Query: 356 TDPPENV--NGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVH-LWED 412
+D P+ + NG ++ + VLEVS R + P K L + S E+ + L
Sbjct: 39 SDLPDTILKNGLNN-RYRVLEVSIIQR-----NGSDPEKHLTITASPSLEDTELCILRSG 92
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
W + PGD V++ GE G + ++ +L+++PD+L+SGT +++S C RR+VL E
Sbjct: 93 WESVPVVPGDIVHLEGECSS-GTWVISAQSGYLVLYPDLLLSGTTISSSIRCMRRAVLSE 151
Query: 473 RLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL-QKNIESLYACGVNEN 530
R + SE S L+GT+LH IFQ + + K E ++V QK ++ +Y + +
Sbjct: 152 RFRGSESGSHQMLVGTILHDIFQQSVTNNLTQEKVQELANKIVYGQKYLKEMYLLNLKQA 211
Query: 531 DIHKTLVEAIPKMLNWIILF------KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
I + + E +P W F ++ L D K+++ ++ DIEE W
Sbjct: 212 QIMQEVEEYLPSFFKWAEDFMHNPANQNKMQLKLSNGGKTEDVSSKIEVVDILDIEETIW 271
Query: 585 APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMS 644
+P++GLKG ID + RVKI + + I+PLE K+GK N S+EHR+QVILYTLL
Sbjct: 272 SPRFGLKGKIDVTARVKIHCQSG-VQSRIMPLELKSGKESN---SIEHRSQVILYTLLNL 327
Query: 645 ERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKASTTQQ---- 696
ER + ++G L YL++ V R D L+ RN A + K+ +Q
Sbjct: 328 ERRVDP-EAGFLLYLKTGTMYPVSGARMDRRELMKLRNHVAFYLTHSTYKSGVGRQNSQL 386
Query: 697 --LPPMLRAYGGNKECSGLGNMF-----------------------DSHIYHLTTAHCSF 731
LPP++ K CS + N F D HL +H +
Sbjct: 387 AALPPVIDDSQTCKYCSQMQNCFLYGRAVEQKMESVAFPPALVPVIDRETQHLKPSHLEY 446
Query: 732 LRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV 789
W ++ LE + + K IW + G + ++ H+ S
Sbjct: 447 FSLWYLMLTLELQSGEHKKGYKNIWMTPSLEKXEKFGDWNGNLIRVDEVHEVS----EVH 502
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGLITE 848
Y F ++ +P L GD V++S E L +A+G + E
Sbjct: 503 YPFFQRRKXAPYXT-------------------NLLVGDRVVVSGEEKGLLGLATGYVRE 543
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQ 908
+S VS L GRN S+ V+R+D DE V NL +L
Sbjct: 544 VSGTKVSC-------LLGRNLSNLPKD---TVFRLDHDEGDVGTGVPFKNLSKLMKDCPV 593
Query: 909 SSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALIL 966
S +LR +I+D + PRF SV + + K LN Q++A+ +VL +KDY LI+
Sbjct: 594 SERLRNLIIDFQKPRFIQHLSSVLPPEAKETVANILKGLNKPQKQAMKQVLLSKDYTLIV 653
Query: 967 GMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHK 1026
GMPGTGKT+T+ V+ L G S+LLTS+T++AVDN+L+KL + F+R+G+ + VH
Sbjct: 654 GMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNVLLKLAKFKVGFLRLGQAQKVHP 713
Query: 1027 EIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
+IQK+ C S +I SV ++++ + VVA +C+G+ +P+ K+FD CI+DEA Q
Sbjct: 714 DIQKYTEEEICRSR-SIKSVTDLEELYNSQPVVATSCMGVNHPIFVQKQFDFCIVDEASQ 772
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
+ + LGPL + +FVLVGDH QLPPLV + EAR+ GM SLF+RL E++ A+ L
Sbjct: 773 ISQLICLGPLFCSKRFVLVGDHQQLPPLVLNAEARDLGMSESLFKRL-EQNQNAVVQLTV 831
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL--------SSCSPWLKEALNPC 1193
QYRM IM LSN L+Y +L CGS++++NA + + +L + WLKE L+P
Sbjct: 832 QYRMNSKIMSLSNMLVYEGKLECGSEKVSNATVNLPNLRKLKLDFGDASKTWLKEVLDPD 891
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
PV F+NT+ +PA E + ++N EA ++ +T +K + DIGII+PY Q
Sbjct: 892 TPVCFLNTEKVPAPEHAEKGGISNVTEAKIVLFLTSLFIKAGCKPSDIGIISPYRHQLKT 951
Query: 1254 IRHSLSV---SSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVAL 1308
I ++ + VE++T+DKYQGRDK I+VSFVR+S EN SLL DW R+NVA+
Sbjct: 952 ITDLMAKWKENRVEVNTVDKYQGRDKSIIIVSFVRNSIDEN----LGSLLKDWRRLNVAI 1007
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
TRAK KL+MVG +L P L+ L+ + Q+ ILN
Sbjct: 1008 TRAKHKLVMVGCVPSLCCYPPLEKLLCHLQSQAMILN 1044
>gi|408360056|sp|Q5ZKG3.2|DNA2_CHICK RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 992
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 352/1025 (34%), Positives = 533/1025 (52%), Gaps = 140/1025 (13%)
Query: 386 DAKSPYKVLRLLNEQS-GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+ + P K L + ++ S G+ L W + PGD V++ G+ G + ++ +
Sbjct: 28 EGRDPEKHLAVSSDPSLGDTELCVLQNGWESVPVVPGDIVHLEGDCSS-GTWVINEQSGY 86
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPT 503
LI++PD+L+SGT +++S C R++VL ER + SE S L+GT+LH+IFQ + +
Sbjct: 87 LILYPDLLLSGTTISSSIRCMRKAVLSERFRGSECGSRQTLVGTILHEIFQQSVTNNLSP 146
Query: 504 MKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF------KDSQD 555
K +EE A+ ++ QK ++ +Y + + +I + + E +P W F ++
Sbjct: 147 EK-VEELAKKIVYGQKYLKEMYHLKLKQTEIMQEIEEYLPSFFKWTEDFVRNPANQNKMQ 205
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
L P+ + D ++I ++ DIEE W+P++GLKG ID + RVKI ++ I I+P
Sbjct: 206 LKLPSENKTGDCSSTVEIVDILDIEENIWSPRFGLKGKIDVTARVKIH-RQGGIQSRIMP 264
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
LE K+GK N S+EHR+QVILYTLL ER + ++G L YL++ V R D
Sbjct: 265 LELKSGKESN---SVEHRSQVILYTLLNLERRVDP-EAGFLLYLKTGTMYPVTGTRMDRR 320
Query: 676 GLIMRRNEFA----NDIIKASTTQQ------LPPMLRAYGGNKECSGLGNMF-------- 717
LI RN+ A + K++ +Q LPP++ K CS + N F
Sbjct: 321 ELIKLRNQVAFYLMHSTYKSAVGRQQSQLAALPPLIDDSQACKYCSQIHNCFLYSRAVEE 380
Query: 718 ---------------DSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSG 760
+ HL +H + W ++ LE + K IW
Sbjct: 381 RMASVSFPPALIPIIEKETQHLKPSHLEYFSLWYLMLTLEMQSGDSKKGYKNIWMIPSLE 440
Query: 761 GNHFTGCLSSIV-LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKD 819
C+ +++ +D E + ++++ F R++ P N
Sbjct: 441 REKAGDCVGNMIRVDQVQE----VSEGQYLHSFQRKNGAVPGAN---------------- 480
Query: 820 MDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
L GD V++S E + L +A+G + EIS +S L GRN S +S
Sbjct: 481 ----LLVGDRVVVSGEENGLLGLATGYVREISATKISC-------LLGRNLSKLPES--- 526
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPAL 936
+R+D +E S V NL +L S S +LR +I+D PRF SV +
Sbjct: 527 TTFRLDHEEGDCSIGVPFENLSKLMKDSPVSEKLRNLIIDFHKPRFIQHLSSVLPPEAKE 586
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
+ K LN Q++A+ +VL ++DY LI+GMPGTGKT+T+ V+ L G S+LLTS+
Sbjct: 587 AVASILKGLNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSF 646
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQV 1051
T++AVDN+L+KL + F+R+GR + VH +I+K C S +I SV ++++ +
Sbjct: 647 THTAVDNILLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSK-SIKSVTDLEELYNSQ 705
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
VVA C+GI +P+ K+FD CI+DEA Q + P+ LGPL + +FVLVGDH QLPPLVQ
Sbjct: 706 PVVATACMGINHPIFVQKQFDFCIVDEASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQ 765
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
++EAR+ GM SLF+RL E++ A+ L QYRM IM LSN L+Y +L CGS++++N
Sbjct: 766 NSEARDLGMSESLFKRL-EQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSN 824
Query: 1172 AKIKVSDLS--------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
A + +L + WLKE L P +PV F+NT+
Sbjct: 825 ATANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTE--------------------- 863
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCIL 1280
K DIGII+PY Q +I L + VE++TIDKYQGRDK I+
Sbjct: 864 ---------KAGCRPSDIGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIII 914
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
VSFVR+S N N +LL DW R+NVA+TRAK KLIMVG +L + P L+ L+ + +
Sbjct: 915 VSFVRNS-NDEN-LGALLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSE 972
Query: 1341 SGILN 1345
+ I N
Sbjct: 973 AMIFN 977
>gi|57529868|ref|NP_001006497.1| DNA replication ATP-dependent helicase/nuclease DNA2 [Gallus gallus]
gi|53130966|emb|CAG31780.1| hypothetical protein RCJMB04_11a16 [Gallus gallus]
Length = 992
Score = 500 bits (1288), Expect = e-138, Method: Compositional matrix adjust.
Identities = 351/1025 (34%), Positives = 533/1025 (52%), Gaps = 140/1025 (13%)
Query: 386 DAKSPYKVLRLLNEQS-GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
+ + P K L + ++ S G+ L W + PGD V++ G+ G + ++ +
Sbjct: 28 EGRDPEKHLAVSSDPSLGDTELCVLQNGWESVPVVPGDIVHLEGDCSS-GTWVINEQSGY 86
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPT 503
LI++PD+L+SGT +++S C R++VL ER + SE S L+GT+LH+IFQ + +
Sbjct: 87 LILYPDLLLSGTTISSSIRCMRKAVLSERFRGSECGSRQTLVGTILHEIFQQSVTNNLSP 146
Query: 504 MKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF------KDSQD 555
K +EE A+ ++ QK ++ +Y + + +I + + E +P W F ++
Sbjct: 147 EK-VEELAKKIVYGQKYLKEMYHLKLKQTEIMQEIEEYLPSFFKWTEDFVRNPANQNKMQ 205
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
L P+ + D ++I ++ DIEE W+P++GLKG ID + RVKI ++ I I+P
Sbjct: 206 LKLPSENKTGDCSSTVEIVDILDIEENIWSPRFGLKGKIDVTARVKIH-RQGGIQSRIMP 264
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
LE K+GK N S+EHR+QVILYTLL ER + ++G L YL++ V R D
Sbjct: 265 LELKSGKESN---SVEHRSQVILYTLLNLERRVDP-EAGFLLYLKTGTMYPVTGTRMDRR 320
Query: 676 GLIMRRNEFA----NDIIKASTTQQ------LPPMLRAYGGNKECSGLGNMF-------- 717
LI RN+ A + K++ +Q LPP++ K CS + N F
Sbjct: 321 ELIKLRNQVAFYLMHSTYKSAVGRQQSQLAALPPLIDDSQACKYCSQIHNCFLYSRAVEE 380
Query: 718 ---------------DSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSG 760
+ HL +H + W ++ LE + K IW
Sbjct: 381 RMASVSFPPALIPIIEKETQHLKPSHLEYFSLWYLMLTLEMQSGDSKKGYKNIWMIPSLE 440
Query: 761 GNHFTGCLSSIV-LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKD 819
C+ +++ +D E + ++++ F R++ P N
Sbjct: 441 REKAGDCVGNMIRVDQVQE----VSEGQYLHSFQRKNGAVPGAN---------------- 480
Query: 820 MDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
L GD V++S E + L +A+G + EIS +S L GRN S +S
Sbjct: 481 ----LLVGDRVVVSGEENGLLGLATGYVREISATKISC-------LLGRNLSKLPES--- 526
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPAL 936
+R+D +E S V NL +L S S +LR +I+D PRF +V +
Sbjct: 527 TTFRLDHEEGDCSIGVPFENLSKLMKDSPVSEKLRNLIIDFHKPRFIQHLSTVLPPEAKE 586
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
+ K LN Q++A+ +VL ++DY LI+GMPGTGKT+T+ V+ L G S+LLTS+
Sbjct: 587 AVASILKGLNKPQKQAMKQVLLSRDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSF 646
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQV 1051
T++AVDN+L+KL + F+R+GR + VH +I+K C S +I SV ++++ +
Sbjct: 647 THTAVDNILLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSK-SIKSVTDLEELYNSQ 705
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
VVA C+GI +P+ K+FD CI+DEA Q + P+ LGPL + +FVLVGDH QLPPLVQ
Sbjct: 706 PVVATACMGINHPIFVQKQFDFCIVDEASQISQPICLGPLFCSKRFVLVGDHQQLPPLVQ 765
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
++EAR+ GM SLF+RL E++ A+ L QYRM IM LSN L+Y +L CGS++++N
Sbjct: 766 NSEARDLGMSESLFKRL-EQNQNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVSN 824
Query: 1172 AKIKVSDLS--------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
A + +L + WLKE L P +PV F+NT+
Sbjct: 825 ATANLPNLKMLKLEFADASKTWLKEVLEPDKPVCFLNTE--------------------- 863
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCIL 1280
K DIGII+PY Q +I L + VE++TIDKYQGRDK I+
Sbjct: 864 ---------KAGCRPSDIGIISPYRHQLKVITDLMARLKENRVEVNTIDKYQGRDKSIII 914
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
VSFVR+S N N +LL DW R+NVA+TRAK KLIMVG +L + P L+ L+ + +
Sbjct: 915 VSFVRNS-NDEN-LGALLEDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSE 972
Query: 1341 SGILN 1345
+ I N
Sbjct: 973 AMIFN 977
>gi|345798967|ref|XP_546133.3| PREDICTED: DNA2-like helicase [Canis lupus familiaris]
Length = 1026
Score = 498 bits (1283), Expect = e-138, Method: Compositional matrix adjust.
Identities = 348/978 (35%), Positives = 521/978 (53%), Gaps = 92/978 (9%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
L DW + PGD +++ G+ D D + +LI++PD+L+SGT +A+S C RR
Sbjct: 81 LRNDWCSVPVEPGDIIHLEGDCLSDTWIID--EDFGYLILYPDMLISGTSIASSIRCMRR 138
Query: 468 SVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYA 524
+VL E + S+ + L+GT+LH++FQ + K L+E+A +Q ++++ +Y
Sbjct: 139 AVLSETFRSSDLATRQMLIGTVLHEVFQKAISNSFAPEK-LQEFAFQTVQEIRHLKEMYR 197
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFK---DSQDLNTPTVDFGSDG-----LKKLKISEV 576
+N+ ++ + + E +P W F S D + SDG +++
Sbjct: 198 LNLNQEEVKQEVEEYLPSFSKWAGDFMHQYTSSDFPKMQLSLPSDGNNNNSTCNIEVINS 257
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+Q+
Sbjct: 258 LDIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKELN---SIEHRSQL 313
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGV----MVQRSDLVGLIMRRNEFANDIIKAS 692
+LYTLL ER ++GLL YL++ V + +R + N + +
Sbjct: 314 VLYTLLSQERRADP-EAGLLLYLKTGNMYPVPANHLDKRXXXXXXXXXLFKIGNCALYSI 372
Query: 693 TTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE 752
+Q + G+ HL H + W ++ LE++ KN
Sbjct: 373 AVEQ------QTDDSSVPIGMLPKIKEETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNH 426
Query: 753 --IWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSL 810
IW S C+ +++ E K+ D +++++F R+ +GD
Sbjct: 427 QHIWLMPASEMEESGSCIGNLI---RTECVKTICDGQYLHNFQRK----------NGD-- 471
Query: 811 IGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNS 869
IP + L +GD +ILS E L A++ G + EI+ V+ L RN
Sbjct: 472 ----IPVTN----LMAGDRIILSGEERTLFALSRGYVKEINVTSVTC-------LLDRNV 516
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--G 927
S +S L +R+D++E NL +L + S +LR +I+D P+F S
Sbjct: 517 SVLPESTL---FRLDQEEKTCDIDTPLGNLSKLMENTCVSQKLRDLIIDFREPQFISYLS 573
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L
Sbjct: 574 SVLPYDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYTC 633
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVE 1042
G S+LLTSYT+SAVDN+L+KL I F+R+GR + VH++IQK C S I S+
Sbjct: 634 GFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGRTQKVHQDIQKFTEEEICRSK-PIKSLA 692
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
+++ + ++VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGD
Sbjct: 693 LLEELYNSHRIVATTCMGINHPIFSRKTFDFCIVDEASQISQPICLGPLFFSQRFVLVGD 752
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
H QLPPLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L
Sbjct: 753 HQQLPPLVLNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKLTYDGKL 811
Query: 1163 SCGSDEIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
CGSD++ANA + + +L S +PW+ A P PV F+NTD +PA E
Sbjct: 812 ECGSDKVANAVVNLPNLKDVKLELEFYADYSENPWMIGAFEPNNPVCFLNTDKVPAPEQV 871
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHT 1267
+ ++N EA LI +T +K + DIGII PY Q +I L S+ VE++T
Sbjct: 872 EKGGVSNITEAKLIVFLTSVFIKAGCKPSDIGIIAPYRQQLKIINDLLFHSSIRMVEVNT 931
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+DKYQGRDK ILVSFVRS N LL DW R+NVA+TRAK KLI++G +L++
Sbjct: 932 VDKYQGRDKSIILVSFVRS--NKDGPIGELLKDWRRLNVAITRAKHKLILLGCVPSLNRY 989
Query: 1328 PLLKLLINKVGEQSGILN 1345
P L L++ + + I++
Sbjct: 990 PPLGKLLHHLNSEKLIMD 1007
>gi|254573166|ref|XP_002493692.1| Essential tripartite DNA replication factor with single-stranded
DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238033491|emb|CAY71513.1| Essential tripartite DNA replication factor with single-stranded
DNA-dependent ATPase [Komagataella pastoris GS115]
Length = 1397
Score = 498 bits (1282), Expect = e-137, Method: Compositional matrix adjust.
Identities = 325/992 (32%), Positives = 518/992 (52%), Gaps = 110/992 (11%)
Query: 404 ERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFS 463
+R + + + W I GD +++IG+ D D + N LI +PD+L+S T V+ S S
Sbjct: 397 QRNIVIRDFWAELDIEEGDVIHIIGK--DPSLTD--KRTNILIWNPDLLLSSTLVSESIS 452
Query: 464 CPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESL 522
C RRS L +L E SI ++G ++H +FQ L T F+ L N+ S+
Sbjct: 453 CKRRSFLKNKLTFPGESSIPLIVGVIVHTVFQQCLAAGNITDDFISTLIESELNANLFSI 512
Query: 523 YACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL-KISEVTDIEE 581
++ + + + + E +P + W + S ++ + G K + S + DIEE
Sbjct: 513 FSINESRETVREKIQEHVPFIKQWHDTYTRSIPVSKSSTAIGGTKDKAMVSASNILDIEE 572
Query: 582 MAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTL 641
W+P +GL+G+ID ++ I+ N+ ++PLE KTG + + HRAQV LY+L
Sbjct: 573 NIWSPVFGLRGLIDVTVEACIKGPNND-GRFVVPLELKTG----SREYISHRAQVSLYSL 627
Query: 642 LMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML 701
L+ ERY D L + + Q +++ DL ++ RNE + + + +LPP++
Sbjct: 628 LVRERYDIDSDYFFLVFTKLKSVQLHNIKQHDLRLIVQLRNELSGYLKLTNGLNKLPPLI 687
Query: 702 RAYGGNK-----ECSGLGNMF------DSHI----YHLTTAHCS------FLRHWDRLID 740
+ ++ C L + DS I Y L T+H F + W + D
Sbjct: 688 KQSECDRCDVLVPCMALNKLIENGTSEDSGILEQKYELLTSHLDKEEYKFFFKKWTDM-D 746
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSP 800
++ + R +GG CL + + E S + R+V
Sbjct: 747 IDG----------YRKRQNGGT----CLGGLEIIEMEESSVSNYNYRYVL---------- 782
Query: 801 NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSK 860
N + + ++ + +A +K D +++S E A+A G I I+ V + +
Sbjct: 783 NRDCNSSNAPLTSAQFSK--------YDRILVSDEEGHYALAVGCIDLITPTTVIIRTDR 834
Query: 861 -----PLRLPGRN-----------SSSDADSLLHEV----WRIDKDEIMTSFSVMRYNLV 900
L+LPG N S D + L EV +RIDK+E ++ R+N++
Sbjct: 835 RIVNSSLKLPGFNARNNQTFQSVLSKRDFEMLPAEVKNKTFRIDKNEFYNGLALARFNIL 894
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
LFL + RRM+V+L+AP F S P + S N DQ A+ K L +
Sbjct: 895 NLFLPEYGDEKRRRMVVELKAPSF------SNKPLPYNVSKLGSFNPDQLAAVKKALCTE 948
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
DY+LILGMPGTGKT+ + ++ ++ G S+LLTS+T+SAVD++L+KL IDF R+G
Sbjct: 949 DYSLILGMPGTGKTTVIAQIIRIMVANGKSVLLTSHTHSAVDSILLKLLDDGIDFYRVGS 1008
Query: 1021 HEVVHKEIQKHC---LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
+H ++K + ++NS+E+ ++ + Q VVA TC+G+ + + + FD CI+D
Sbjct: 1009 EAKIHPLVRKFMPQKRGSADMNSIEDFQRMIHQAPVVAATCMGVGDLVFNYRTFDYCIVD 1068
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q ++P LGPL F KF+LVGDH+QLPPLV++ EAR G++ SLF+ LSE+HPQ++
Sbjct: 1069 EASQVSMPFCLGPLRFCDKFILVGDHFQLPPLVKNPEARNQGLDRSLFKILSEKHPQSVV 1128
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD--------LSSCSP----W 1185
+L QYRMC +M LSN LIY +RL CGSD +A +++ L +P W
Sbjct: 1129 SLSYQYRMCADVMLLSNKLIYENRLKCGSDNVAQRSLRIPMKERLDHLLLDPSTPKNRLW 1188
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L VIF++ D +PA E ++NP EA L+ +I L+ + K+IG+++
Sbjct: 1189 LHHIFVEENRVIFLDHDDVPAKERMSTDRVDNPTEAELVGQIVDSLINCGCDSKEIGVMS 1248
Query: 1246 PYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q L++ L V +VE+ T D++QGRDK+CI++S VRS N N +LL +W R
Sbjct: 1249 FYRAQVKLMKTRLVSHVQNVEVMTADQFQGRDKECIIISLVRS--NATNSVGNLLKEWRR 1306
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
INVA+TRAK KL+++GS +TL ++ LK ++
Sbjct: 1307 INVAITRAKSKLLILGSRKTLEQLETLKAFLS 1338
>gi|406608166|emb|CCH40600.1| DNA replication ATP-dependent helicase Dna2 [Wickerhamomyces
ciferrii]
Length = 1465
Score = 497 bits (1280), Expect = e-137, Method: Compositional matrix adjust.
Identities = 334/1035 (32%), Positives = 528/1035 (51%), Gaps = 109/1035 (10%)
Query: 360 ENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIA 419
+NV H L ++KN K K+L + + +G + + + W I
Sbjct: 417 KNVKRFQVKHVLTTSFTQKN-------VKRDQKILTAV-DGNGNTSKIVVRDPWVKLDIG 468
Query: 420 PGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SE 478
D ++++GE K +N LI +PD+L+S T + + +C RRSVL RL E
Sbjct: 469 AQDVIHIVGE---SYKLVDKDSDNLLIWNPDLLLSATLIGDTINCYRRSVLKTRLDFRGE 525
Query: 479 RSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVE 538
+++ ++G ++H +FQA L + + +FL E L N+ ++ + I +
Sbjct: 526 YNMALIVGEIVHSLFQAVLRERNCSSEFLHEELEHELDDNLLTILVIDETKESIRGEVSN 585
Query: 539 AIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL-KISEVTDIEEMAWAPKYGLKGMIDAS 597
IP + W + + L + K L S + DIEE W+P YGL+G+ID +
Sbjct: 586 HIPYIKTWYENYAVDKPLQRSGIRISGKREKSLFSASNILDIEENIWSPIYGLRGLIDVT 645
Query: 598 IRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
I ++S ++ I PLE K+G ++ + H AQ LYTLL+ +RY + +L
Sbjct: 646 IEANLQSS-SKSGKFIAPLELKSG----NRAQLAHGAQASLYTLLLKDRYEMDVGFFMLV 700
Query: 658 YLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY------------- 704
Y + +T + L L+M RN +N + + S + LP + ++
Sbjct: 701 YTRLKETTKFEIDHRQLKDLVMCRNLLSNYLKEGS--RALPELKKSAECDNCYAVSECMT 758
Query: 705 ------GGNKECSGL-GNMFDSHIYHLTT-AHCSFLRHWDRLIDLEAKEMQVVKNEIWCS 756
G SGL N++D HL +H SF +WD LI E + ++K +++ +
Sbjct: 759 YNKLMEDGTANESGLKDNVYDDITGHLNKDSHKSFFNYWDDLITKEEGSINMLKRDLFLT 818
Query: 757 RGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAI 815
G +G CLS++V+ + + + +++Y F R + LN S
Sbjct: 819 DGPTREKTSGKCLSNLVIKGAIDEEGD-ESKKYIYTFERNTKGAAALNVSQ--------- 868
Query: 816 PTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVS------------------ 857
L D +I+S ES A+ SG + + +++S
Sbjct: 869 --------LSKHDRIIVSDESGHFALCSGFVLSVRPTEITISTIRRLKNNNVKLDNFDVR 920
Query: 858 ----FSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLR 913
+ LR RNS+++ D +RIDKDE+ + R+NL+ LFL+ + R
Sbjct: 921 NNQTYQTVLRPMERNSTTNGDL----TYRIDKDEMFHGMKLARFNLLNLFLKDGDVHK-R 975
Query: 914 RMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGK 973
+ V+ P VF P L + S N DQ +A KVL+A+DYAL+LGMPGTGK
Sbjct: 976 ELFVEGRKP------VFKAKPVLYELPKGHSFNIDQIQAFDKVLSAEDYALLLGMPGTGK 1029
Query: 974 TSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
T+ + ++ L+ + S+LLTSYT+SAVDN+L+K+K+ I VR+G +H EI++
Sbjct: 1030 TTVIAQLIRLLVSQNKSVLLTSYTHSAVDNILLKMKNDDIGIVRLGSVSRIHPEIKEFSP 1089
Query: 1034 SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
+I S ++ K + VVA TCLGI++ + ++FD CI+DE+ Q ++PV LGPL F
Sbjct: 1090 YQKDIKSKSDLDKAFMEPPVVATTCLGISDWIFNKRRFDYCIVDESSQVSMPVCLGPLGF 1149
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
KFVLVGDHYQLPPL+ + +A+ G+ SLF+ LSE HP+++ L QYRMC IM LS
Sbjct: 1150 CDKFVLVGDHYQLPPLIVNQDAKA-GLSKSLFKSLSESHPESVVDLTHQYRMCSDIMLLS 1208
Query: 1154 NALIYGDRLSCGSDEIANAKIKV-----------SDLSSCSPWLKEALNPCRPVIFVNTD 1202
N +IY RL CGSDE+AN K+++ D++ W+ L+ V+F+N D
Sbjct: 1209 NTIIYEGRLKCGSDEVANQKLRIPEKGRLNEVISQDVTPDQFWMDAILDDKNKVLFLNHD 1268
Query: 1203 MLPA-YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-V 1260
+ E+ + + N EA L+ +I Q +V +E IGI++ Y +Q L S
Sbjct: 1269 NVGGCEESASKENIENHKEAELVHQIVQGMVLCGVEQSSIGIMSFYRAQLRLFYRKFSDY 1328
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+E+ T D++QGRDKDC+++S V+S N RN SLL +W R+NVA+TRA+ KLI++GS
Sbjct: 1329 KDIEMLTADQFQGRDKDCVIISLVKS--NHRNDAGSLLKEWRRVNVAITRARSKLIIIGS 1386
Query: 1321 CRTLSKVPLLKLLIN 1335
RTL + + +N
Sbjct: 1387 KRTLQSLQTIDAFMN 1401
>gi|190346630|gb|EDK38764.2| hypothetical protein PGUG_02862 [Meyerozyma guilliermondii ATCC 6260]
Length = 1403
Score = 497 bits (1279), Expect = e-137, Method: Compositional matrix adjust.
Identities = 330/971 (33%), Positives = 518/971 (53%), Gaps = 95/971 (9%)
Query: 421 GDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SER 479
GD V++I D+ V ++N LI +PD LVS T V++ +C R+SVL RL
Sbjct: 428 GDIVHIIST-DNGNPRLVDDDHNLLIWNPDTLVSPTSVSSQLTCARKSVLLSRLNFPGVS 486
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL-QKNIESLYACGVNENDIHKTLVE 538
SI + GT+LH+IFQ+ + +E T++F+ + + + Q+ IE N++ T+ E
Sbjct: 487 SIHLITGTILHEIFQSCIREENWTVEFMSDLSNYSIDQRRIEIFSLGEEMMNNVKHTIQE 546
Query: 539 AIPKMLNWIILFKDS--------QDLNTPTVDFGSDGLKK---LKISEVTDIEEMAWAPK 587
+P + W + Q PT +K +S+ +IEE W+P
Sbjct: 547 QLPYLREWFDTYYKKVPSSANSIQSATNPTTAPRKAERRKTVMFAVSKALEIEETIWSPM 606
Query: 588 YGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERY 647
+G+ G ID +I K+ N+ + M++PLE KTG+ + H AQ LYTLL +RY
Sbjct: 607 FGINGKIDVTIEAKMRDG-NQNSTMLMPLEIKTGR-----EHISHHAQSALYTLLFKDRY 660
Query: 648 LKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR----- 702
++ + LL Y + T+ + R+DL L+ RN+ + K +T ++LP +L+
Sbjct: 661 EIYLTAFLLVYTKEKITKKEEIGRNDLKSLVNLRNQLT-EYFKLNT-RKLPNLLQSSLCD 718
Query: 703 --------------AYGGNKECSGLG-NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ 747
A G E SG+G + ++ + HL+ H F WD +I E M
Sbjct: 719 RCEIQQACMTINFLAEDGTGEDSGIGIDNYNFLVDHLSEKHKHFYNVWDSVITKEESSMS 778
Query: 748 VVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASD 806
+K E+W + G C+S + + ++ S F Y F R
Sbjct: 779 RLKRELWLMNSTDREQKNGKCISDLKVTDCRINEGS---EWFDYTFKRAET--------- 826
Query: 807 GDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLP 865
+++ ++ + L D V +S+E+ A++ G I ++ + + VS + L P
Sbjct: 827 ------SSLSSRSFQLSQLSKNDRVTISSENGHYALSQGYIVKMRKDLIVVSAMRKLS-P 879
Query: 866 GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD 925
+ S + +H +RIDKDE+ + R+N++ LFL S + R ++VD + PRF
Sbjct: 880 SVSRSYANNQSVH--YRIDKDEMFYGMGLARFNILNLFLVDGDSRR-REILVDRKPPRFT 936
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + + P K LN DQ AI KV++AKD++LILGMPGTGKT+ + +K+L+
Sbjct: 937 NGELKFEAP--------KYLNVDQVAAIKKVISAKDFSLILGMPGTGKTTVISELIKSLV 988
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
G S+LLTSYT+SAVDN+L+KLK + +RIG VH++IQ +I + ++
Sbjct: 989 ENGKSVLLTSYTHSAVDNILLKLKDSGLKILRIGSSSKVHRDIQTFL--PADIKTYDDFH 1046
Query: 1046 KRLDQVKVVAVTCLGITNPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
+ + +VVA TCLGI + + + FD CI+DEA Q T+PVSLGPL F +FVLVGDH+
Sbjct: 1047 RAYLEPQVVAATCLGIDDIAFSLGRTFDYCILDEASQVTMPVSLGPLRFCKRFVLVGDHH 1106
Query: 1105 QLPPLVQSTEA--RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLPPLVQ +A RE + SLF+ L + PQ++S L Q+RMC+ IM LSN L+Y +RL
Sbjct: 1107 QLPPLVQHGDADVRE-LLSTSLFKTLGDAFPQSVSELTYQFRMCEDIMSLSNILVYENRL 1165
Query: 1163 SCGSDEIANAKIKV------------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
CGS+++A + + + S W+ E L+P R VIF+N DM+P YE
Sbjct: 1166 KCGSEKVARNSLVIPHPNAVDQLLLSRNTSKNERWMDEILDPERKVIFLNHDMIPGYETC 1225
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTID 1269
+ N EA L+ +I L + IG++ Y SQ L+ LS SVE T D
Sbjct: 1226 IGDKIENLTEAELVFQIVDALTTCGVPESSIGVMALYRSQLRLLMKGLSDKKSVECLTAD 1285
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
++QGRDK+C+++S VRS++ + LL +W RINVA+TR+K KLI++GS + + +
Sbjct: 1286 QFQGRDKECVVISLVRSNKELK--VGDLLKEWRRINVAITRSKTKLIILGSAAIMKSIGI 1343
Query: 1330 LKLLINKVGEQ 1340
L +++ + ++
Sbjct: 1344 LNRVLSLIEQK 1354
>gi|146418335|ref|XP_001485133.1| hypothetical protein PGUG_02862 [Meyerozyma guilliermondii ATCC 6260]
Length = 1403
Score = 494 bits (1272), Expect = e-136, Method: Compositional matrix adjust.
Identities = 333/971 (34%), Positives = 515/971 (53%), Gaps = 93/971 (9%)
Query: 421 GDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SER 479
GD V++I D+ V ++N LI +PD LVS T V+ +C R+SVL RL
Sbjct: 428 GDIVHIIST-DNGNPRLVDDDHNLLIWNPDTLVSPTSVSLQLTCARKSVLLSRLNFPGVS 486
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL-QKNIESLYACGVNENDIHKTLVE 538
SI + GT+LH+IFQ+ + +E T++F+ + + + Q+ IE N++ T+ E
Sbjct: 487 SIHLITGTILHEIFQSCIREENWTVEFMSDLSNYSIDQRRIEIFSLGEEMMNNVKHTIQE 546
Query: 539 AIPKMLNWIILFKDS--------QDLNTPTVDFGSDGLKK---LKISEVTDIEEMAWAPK 587
+P + W + Q PT +K +S+ +IEE W+P
Sbjct: 547 QLPYLREWFDTYYKKVPSLANSIQSATNPTTAPRKAERRKTVMFAVSKALEIEETIWSPM 606
Query: 588 YGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERY 647
+G+ G ID +I K+ + M++PLE KTG+ + H AQ LYTLL +RY
Sbjct: 607 FGINGKIDVTIEAKMRDGNQNLT-MLMPLEIKTGR-----EHISHHAQSALYTLLFKDRY 660
Query: 648 LKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR----- 702
++ + LL Y + T+ + R+DL L+ RN+ + K +T ++LP +L+
Sbjct: 661 EIYLTAFLLVYTKEKITKKEEIGRNDLKSLVNLRNQLT-EYFKLNT-RKLPNLLQLSLCD 718
Query: 703 --------------AYGGNKECSGLG-NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ 747
A G E SG+G + ++ + HL+ H F WD +I E M
Sbjct: 719 RCEIQQACMTINFLAEDGTGEDSGIGIDNYNFLVDHLSEKHKHFYNVWDSVITKEESSMS 778
Query: 748 VVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASD 806
+K E+W + G C+S + + ++ S F Y F R +L +S
Sbjct: 779 RLKRELWLMNSTDREQKNGKCISDLKVTDCRINEGS---EWFDYTFKRAET---SLLSSR 832
Query: 807 GDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPG 866
L L D V +S+E+ A++ G I ++ + + VS + L P
Sbjct: 833 SFQL-----------SQLSKNDRVTISSENGHYALSQGYIVKMRKDLIVVSAMRKLS-PL 880
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS 926
+ S + L+H +RIDKDE+ + R+N++ LFL S + R ++VD + PRF +
Sbjct: 881 VSRSYANNQLVH--YRIDKDEMFYGMGLARFNILNLFLVDGDSRR-REILVDRKPPRFTN 937
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
G + + P K LN DQ AI KV+ AKD++LILGMPGTGKT+ + +K+L+
Sbjct: 938 GELKFEAP--------KYLNVDQVAAIKKVILAKDFSLILGMPGTGKTTVISELIKSLVE 989
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
G S+LLTSYT+SAVDN+L+KLK + +RIG VH++IQ +I + ++ +
Sbjct: 990 NGKSVLLTSYTHSAVDNILLKLKDSGLKILRIGSSSKVHRDIQTFL--PADIKTYDDFHR 1047
Query: 1047 RLDQVKVVAVTCLGITNPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
+ +VVA TCLGI + + + FD CI+DEA Q T+PVSLGPL F +FVLVGDH+Q
Sbjct: 1048 AYLEPQVVAATCLGIDDIAFSLGRTFDYCILDEASQVTMPVSLGPLRFCKRFVLVGDHHQ 1107
Query: 1106 LPPLVQSTEA--RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
LPPLVQ +A RE + SLF+ L + PQ++S L Q+RMC+ IM LSN L+Y +RL
Sbjct: 1108 LPPLVQHGDADVRE-LLSTSLFKTLGDAFPQSVSELTYQFRMCEDIMLLSNILVYENRLK 1166
Query: 1164 CGSDEIANAKIKV------------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
CGS+++A + + + S W+ E L+P R VIF+N DM+P YE
Sbjct: 1167 CGSEKVARNSLVIPHPNAVDQLLLSRNTSKNERWMDEILDPERKVIFLNHDMIPGYETCI 1226
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDK 1270
+ N EA L+ +I L + IG++ Y SQ L+ LS SVE T D+
Sbjct: 1227 GDKIENLTEAELVFQIVDALTTCGVPESSIGVMALYRSQLRLLMKGLSDKKSVECLTADQ 1286
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
+QGRDK+C+++S VRS++ + LL +W RINVA+TR+K KLI++GS + + +L
Sbjct: 1287 FQGRDKECVVISLVRSNKELK--VGDLLKEWRRINVAITRSKTKLIILGSAAIMKSIGIL 1344
Query: 1331 KLLINKVGEQS 1341
+++ + +++
Sbjct: 1345 NRVLSLIEQKN 1355
>gi|210076288|ref|XP_504727.2| YALI0E33377p [Yarrowia lipolytica]
gi|199426994|emb|CAG80331.2| YALI0E33377p [Yarrowia lipolytica CLIB122]
Length = 1390
Score = 492 bits (1266), Expect = e-136, Method: Compositional matrix adjust.
Identities = 339/1044 (32%), Positives = 526/1044 (50%), Gaps = 140/1044 (13%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
F ++EV E S ++ ++ + ++ V L W + GD ++I E
Sbjct: 346 FRIVEVEE-----------SSTQIALVVEDSKAQQHRVALRGCWMRAIPCVGDICHLIDE 394
Query: 430 FDDQGKCDVGRENNF------------LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS 477
+ D+ E +F I++PD LV+ T VA + C R VL ++++
Sbjct: 395 SSND-DMDLDFEMDFDYIVDDMKGDMLFILNPDTLVTCTAVAEAHQCTRNVVLKDKMQGP 453
Query: 478 ER--SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKT 535
SI ALLG ++H+ Q +F+E A V + N++ + G + + +
Sbjct: 454 RGIGSIFALLGVIIHETIQMCFGAVRYDAEFVESCAETVTKANMDGIMLSGESFDSVFAK 513
Query: 536 LVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMID 595
+ + +P ++ W + Q + ++ + + L I++V D+EE W+P+YG+KG ID
Sbjct: 514 IKDRLPNIVEWFREYM-RQTPSAVAIENRTGKKRTLAITKVVDVEEEIWSPRYGIKGKID 572
Query: 596 ASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGL 655
A+I V+ + R ++PLE KTGK + + HR+Q LYTL++ +RY I+ G+
Sbjct: 573 ATIEVREGNHR-----YLVPLEVKTGK---STTHIPHRSQTALYTLMLHDRYTCPINFGV 624
Query: 656 LYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGG------NKE 709
LYY + +T + + ++ L+ RNE A+ + + S + +P ++ G E
Sbjct: 625 LYYSATSETLVIPAVKDEIHNLLAIRNEVASFMRQGS--RDMPDVIYDQGQCDRCFQKSE 682
Query: 710 CSGLGNMFDSHIY---------------------HLTTAHCSFLRHWDRLIDLEAKEMQV 748
C ++D+++ H+T F HWD L+ E + V
Sbjct: 683 CMVYYRLYDTYLKEYMGEDGGATANKARFLQETEHVTEKDSQFFNHWDALLAKEGSDTAV 742
Query: 749 VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGD 808
+K E+W C SS+++D ++ N Y F SP+
Sbjct: 743 LKREVWTMLSKDREREGRCFSSLIIDNVEKNA-----NSLWYTF-----KSPD------- 785
Query: 809 SLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----R 863
G+ IP ++ + GD V++S E+ +A G + S V + + L +
Sbjct: 786 ---GSEIPYASVN--ISPGDRVVISDEAGHYCLAMGTLLGSSSETVRCALDRRLEFSLQK 840
Query: 864 LPGRNSSSDA--DSLL------HEV-----WRIDKDEIMTSFSVMRYNLVQLFL------ 904
L G S+ + S+L HE +R+D+D+ V R NL LF
Sbjct: 841 LQGFRSNDNQVFQSMLTHSSQSHEAPIDFRFRVDRDDFAFGLGVARNNLFSLFAKHLGTD 900
Query: 905 QSAQS-SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+S Q QLR IVDL P+ +G +P + LN DQ RA+ +L +KDY+
Sbjct: 901 ESPQKIEQLRSWIVDLAPPQPVAG-----EPTVKL----GRLNSDQTRAVHHILNSKDYS 951
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL---KSQSIDFVRIGR 1020
L+LGMPGTGKT+T+ + L+ G ++LL+S+T+SAVDN+L+KL S + D +R+G
Sbjct: 952 LLLGMPGTGKTTTIAEIIMELVKNGKTVLLSSFTHSAVDNILLKLMQHPSCNFDMLRLGS 1011
Query: 1021 HEVVHKEIQKHCLS--AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+H E+ +H + N + EE +K VV T LGI + +L ++ FD CI+DE
Sbjct: 1012 TSKIHPEVAEHYAANNRRNYETREEFEKLFLAPPVVGATALGIGDWVLQERHFDYCIVDE 1071
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q TLP LGP+ +A KFVLVGDHYQL P+V++ EA G+ SLF+ L + HP +
Sbjct: 1072 ASQITLPFCLGPIRYADKFVLVGDHYQLTPIVKNPEA--AGLRESLFKMLCDAHPTQVVN 1129
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC----------SPWLKE 1188
L QYRMC IM LSN LIY +L CGSDE+AN + V LS +L
Sbjct: 1130 LGIQYRMCADIMLLSNTLIYDGKLKCGSDEVANQSLAVPQLSKLRTLYADGLPNGDYLGH 1189
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
L+P R VIF+NTD++PA E ++NP EA ++ +I + L +E IG I+ Y
Sbjct: 1190 VLDPKRKVIFLNTDLVPAQETIAGDRIHNPTEAVIVGQIVEALCLCGVEDSQIGCISQYR 1249
Query: 1249 SQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
+Q LI L++ S +E+ T DK+QGRDKDCI+VS VRS+ R LL DW R+NVA
Sbjct: 1250 AQLKLINKELALRSGIEVMTADKFQGRDKDCIVVSLVRSNNEQR--VGDLLKDWRRLNVA 1307
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLK 1331
TR++ KLI++GS TL LLK
Sbjct: 1308 FTRSRSKLIVIGSRATLESFDLLK 1331
>gi|189189422|ref|XP_001931050.1| DNA replication helicase Dna2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972656|gb|EDU40155.1| DNA replication helicase Dna2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1298
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 310/943 (32%), Positives = 495/943 (52%), Gaps = 137/943 (14%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+L+ +V E + D + P KVL + E++ +A+ L + WF T G V+VIGE
Sbjct: 414 YLIKQVDEGSYTTD-RGYQMPEKVLLVEEEKTKLFKAITLRQAWFDTPCTTGSFVHVIGE 472
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F + G+C + +N LI+HPD L+S T VA SF C RR+VL +R+K + ++ + +L GTL
Sbjct: 473 FTNTGQCIIDDHHNMLILHPDHLISSTVVADSFGCLRRAVLQDRVKATSKANAPMLYGTL 532
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH++FQ + FL E ++L +++E++ I + + +P++ W
Sbjct: 533 LHELFQEAMKVNKWDSVFLSEIIDVLLPRHLETILEINSTCEAIKEHMSSKLPELQAWAK 592
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
LF ++ N V + + I+++ D+EE W+P YGLKG IDA+++V + + E
Sbjct: 593 LFVRAEPQNDAVVRELNGRQSIMSINKLLDVEEHVWSPMYGLKGNIDATVQVTMRDDQGE 652
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ +P E KTGK S+ H AQ LY LL+S RY I G+LYYL++ V
Sbjct: 653 -RTLTVPFEVKTGK---NSSNAAHVAQTALYNLLLSNRYDVDIAYGILYYLETSDISRVP 708
Query: 669 VQRSDLVGLIMRRNEFA---NDIIKASTTQQLPPMLRAYGGNKEC--------------S 711
R+D++ +I++RNE A D I +LPP+L+ ++C
Sbjct: 709 AVRNDIMHMIIKRNELACYVRDRI------ELPPILKEDFKCQKCYAQESCFLYHNLVED 762
Query: 712 GLGNM--------FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNH 763
G G M +D + L +H F++ WD L+ E +M + E+W +
Sbjct: 763 GKGEMLNKKTKERYDELVQPLQRSHQDFMKKWDILLTKEETDMMKFRRELWTMLSTDREK 822
Query: 764 FTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD 821
C S+++L+ +++E + + NR+ Y F++Q P P + ++ ++G I
Sbjct: 823 LGRCFSNVILEPGSAHEEENGQKINRYSYTFIKQR-PVPGFSFTESQLIVGEPI------ 875
Query: 822 CTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSSS----- 871
++S E A+A+G +T + + ++V+ + L +LPG NS S
Sbjct: 876 ---------VVSDEQGHFALANGYVTNVKKRRITVAVDRRLHNARIKLPGFNSQSNQTFA 926
Query: 872 -------DADSL-LHE------VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMI 916
+ D++ HE ++R+DKDE + R NL+Q+ S ++ LR +I
Sbjct: 927 GIMEVTKEGDTVSKHEADEEPVLYRLDKDEFSNGMAAARNNLIQIMDNSVYKAHDLRALI 986
Query: 917 VDLEAPRFDSGSVFSQDPALSYIWSEK-SLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
VD AP F + ALS S + S+N DQR A+ KV++AKDYAL+LGMPGTGKT+
Sbjct: 987 VDGRAPVFKPVT-----DALSIPQSSQMSMNSDQRAAVSKVMSAKDYALVLGMPGTGKTT 1041
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LS 1034
T+ H ++ L+ +G S+LLTSYT++AVDN+L+K++ I +R+G + +H E+++ L
Sbjct: 1042 TIAHIIRTLVAKGKSVLLTSYTHTAVDNILLKIRDDKIGILRLGTVKKIHPEVREFATLG 1101
Query: 1035 AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
+SVEE+++ + VVA TCL I + L + FD CI+DEA Q TLPV LGP+ A
Sbjct: 1102 VEPKDSVEELERSWMEPPVVATTCLTINHSLFNRRVFDYCIVDEASQITLPVCLGPIRMA 1161
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
KF+LVGDHYQLPPLVQ+ EA E G+++SLF+ L E HPQA+ +L+ QY
Sbjct: 1162 QKFILVGDHYQLPPLVQNKEAMEGGLDVSLFKLLCEAHPQAVVSLEHQYH---------- 1211
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA-YEAKDHQ 1213
+PV+F+NTD++ A E +
Sbjct: 1212 ---------------------------------------QPVVFINTDLISATLETQSGS 1232
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
+ N +EA L+ ++T L+ + +IGII Y SQ ++R
Sbjct: 1233 RITNTLEARLVTQLTVSLLSLGVAADEIGIIAFYRSQLAMLRQ 1275
>gi|68487366|ref|XP_712454.1| hypothetical protein CaO19.8783 [Candida albicans SC5314]
gi|68487658|ref|XP_712310.1| hypothetical protein CaO19.1192 [Candida albicans SC5314]
gi|46433687|gb|EAK93119.1| hypothetical protein CaO19.1192 [Candida albicans SC5314]
gi|46433842|gb|EAK93270.1| hypothetical protein CaO19.8783 [Candida albicans SC5314]
Length = 1426
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 328/990 (33%), Positives = 510/990 (51%), Gaps = 113/990 (11%)
Query: 418 IAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS 477
+ GD ++VI D V +N LI +PD+++S T ++ +C R++V+ R K
Sbjct: 422 LEKGDVIHVIIT-DSARPTLVDDMHNLLIWNPDIMLSATTISQQLNCSRKTVILSRYKFP 480
Query: 478 ERS-ISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTL 536
S I ++G ++H IFQ + E M+F+ + +L + + +++ G D+ +
Sbjct: 481 GTSTIPIIVGEIVHFIFQECICTERWDMEFMSQVLDQLLSQYMLAIFGIGKELKDVRDEV 540
Query: 537 VEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMID 595
V+ + W + +D S+ + + E DIEE +P +G+KG ID
Sbjct: 541 VKHFDYLETWFKTYYKQPLSKKNLIDETSEKEQIMFAVEEALDIEEEIGSPIFGIKGKID 600
Query: 596 ASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGL 655
A+I K E+K+ + MI P+E KTGK + H AQ LY+LL +RY K+IDS L
Sbjct: 601 ATITAKFENKKLKGQYMI-PMEIKTGK-----EYIYHHAQASLYSLLFKDRYDKNIDSYL 654
Query: 656 LYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR------------- 702
L Y + T+ ++ S+L L+ RN +N I +LPP+++
Sbjct: 655 LVYTKEKVTKKCNIRISELRSLVNLRNRVSNYI---KDNLKLPPLVKNSNCDRCEIRSAC 711
Query: 703 ------AYGGNKECSGLGNMFDSHIYHLTT-------AHCSFLRHWDRLIDLEAKEMQVV 749
G KE SG+ + +Y T ++ + +HWD LI E M
Sbjct: 712 MTLNHLTENGTKEESGI----EEELYEAITRDIFENDSYRKYFQHWDELISKEEDVMGRA 767
Query: 750 KNEIWCSRGSGGNHFTGCLSSIVLDASNE-----------HQKSYRDNRFVYHFVRQHMP 798
E+W C S + + SNE H +D +FVY F + P
Sbjct: 768 VKELWTIPAEDQEFQGKCFSGMTITNSNETESNNFLFSSTHHDKSQDQQFVYTFAKAENP 827
Query: 799 SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSF 858
S N + I D VI+S E A+ +G + +I++ V VS
Sbjct: 828 S-RFNLAKSQVTIN---------------DKVIISDEEGHFALTTGYVKQITKDFVVVST 871
Query: 859 SKPL-----RLPG-------------RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
+ + +L R++ + + + +RIDKD + + RYN++
Sbjct: 872 RRKIITSDYKLKNYNKANNQVFQSVIRSTQQNIRTTTKKRFRIDKDRMFYGLGLARYNVL 931
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
LFL + +SQLR+++VDLE P F + S D ++ N DQ A+ KV +A
Sbjct: 932 SLFLPNG-ASQLRKLVVDLEKPTFTASSWEIPDA--------ETFNPDQIAALKKVFSAD 982
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
DY+LI+GMPGTGKT+ + +K L+ + S+LLTSYTNSAVDN+L+KLK I+F+RIG
Sbjct: 983 DYSLIVGMPGTGKTTVIAQLIKVLVAQRKSVLLTSYTNSAVDNILLKLKDLDIEFLRIGY 1042
Query: 1021 HEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDE 1078
+ VHK+I+ + + I + E+ + KV+A TCL IT+ + FD CI+DE
Sbjct: 1043 PQRVHKDIKDYIPEFKDSITTYEQYVNTYMRPKVIATTCLSITDVCFNLRYSFDYCIVDE 1102
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAIS 1137
A Q TLPVSLGPL FA KFV+VGDH QL PLV + R + + SLF L++EHP ++S
Sbjct: 1103 ASQITLPVSLGPLRFAKKFVMVGDHDQLQPLVTHPDKRVKQELSRSLFSLLAKEHPDSVS 1162
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-----------SDLSSCSPWL 1186
L QYRM IM + N LIY ++L CGS+++A +K+ D+S S W+
Sbjct: 1163 HLTYQYRMNSDIMNVCNTLIYNNKLKCGSEQVAQNSLKIPHPEVLNSFIGEDVSPDSQWI 1222
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+ + V+F++ D +PA E + + N EA LI +I LV ++ +IG+++
Sbjct: 1223 HKIFDEKNNVLFLDYDAVPAVEENVGEMVINTKEALLIQQIVNALVHGGVKEDEIGVMSF 1282
Query: 1247 YNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
Y +Q ++++ +L ++ +EI T D+YQGRDK+CI++S VRS+E R L+ ++ R+N
Sbjct: 1283 YRAQLSVLKKNLNNLKDLEILTADQYQGRDKECIIISLVRSNE--RKFAGDLMKEYRRLN 1340
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
VA TRAK KLI++GS TLS L K I+
Sbjct: 1341 VATTRAKTKLIILGSRFTLSTNELTKTFID 1370
>gi|294659465|ref|XP_002770589.1| DEHA2G06820p [Debaryomyces hansenii CBS767]
gi|199433984|emb|CAR65924.1| DEHA2G06820p [Debaryomyces hansenii CBS767]
Length = 1531
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 323/958 (33%), Positives = 491/958 (51%), Gaps = 108/958 (11%)
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEI 501
N LI +PD+LVS T V+ CPR+SVL RL E SI ++G ++H+IFQA E
Sbjct: 551 NLLIWNPDILVSATTVSQQMGCPRKSVLINRLSFPGESSIPLIVGIIIHEIFQACFHTEN 610
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPT 560
+M ++ L +Q + +Y+ G N + + +P + W FK NT
Sbjct: 611 WSMDYMIGLMELEIQSKLLQIYSIGNEVNKVKTEIQNQLPYLETWFKTYFKKPLSSNTSI 670
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING-MILPLEFK 619
+ ++ DIEE W+P +GLKG +D ++ ++ + NG +LP+E K
Sbjct: 671 PTNHGNQKVMFAANKALDIEENIWSPMFGLKGKVDVTLEGQLYDQ--STNGKFLLPMEIK 728
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TG+ + H AQ LY+LL +RY ++ LL Y + ++ + R+DL L+
Sbjct: 729 TGR-----EYISHHAQSSLYSLLFKDRYDMDVNMFLLVYTKERISKKYDISRTDLKSLVN 783
Query: 680 RRNEFANDIIKASTTQQLPPMLR-------------------AYGGNKECSGL-GNMFDS 719
RN S T++LP +++ G E SGL ++++
Sbjct: 784 LRNRITKYF--KSGTRELPELIKQSQCDRCEVQQACMTINKLVENGTAEESGLPQDVYNG 841
Query: 720 HIYHLTTAHCS--FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDAS 776
+HL S F +WD LI E M +K ++W + G LS +++ S
Sbjct: 842 LTFHLENDENSRVFYNYWDNLITQEEGIMTNLKKDLWTLTAKERENTKGKALSDLIIKES 901
Query: 777 NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
N++ +F Y F R + P N+ L D +I+S +
Sbjct: 902 NDNDDF--QEKFFYTFERPNNPQSLQNSQ------------------LIKYDRIIISDQE 941
Query: 837 DRLAVASGLITEISRFHVSVSFSKP-----LRLPGRNSSSDA--DSLLHE---------V 880
A+A G IT I + ++ + L++ G N + + S+LH+ +
Sbjct: 942 GHFAIAQGFITAIRPSFIKITADRRIVNSNLKVDGFNETDNQTFQSVLHKNLNSQKQDKL 1001
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
+RIDKD++ + RYN++ LFL+ S + R IV+L+ P+F L Y
Sbjct: 1002 YRIDKDDMFHGMGLARYNILNLFLKDGDSRR-RESIVNLKEPKF-------MPSKLQYDI 1053
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
S ++ N DQ A K+L KDY+LILGMPGTGKT+ + +K L+ ++LL SYT+SA
Sbjct: 1054 SSENFNSDQIGAFDKILNTKDYSLILGMPGTGKTTVIAQIIKLLVQNKKTVLLASYTHSA 1113
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVK------VV 1054
VDN+L+K+K ID +R+G VHK+I+K+ ++ ++IK D + VV
Sbjct: 1114 VDNILLKVKDYGIDILRVGSPLKVHKDIRKYV---AGFDTDKQIKNYDDFIATYMTPPVV 1170
Query: 1055 AVTCLGITNPLLTDKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS- 1112
A TCLGI + + FD CI+DEA Q +LP+S+GPL F KF+LVGDH QLPPLVQ
Sbjct: 1171 AATCLGIGDIAFNLRTHFDYCIIDEASQVSLPISIGPLRFCDKFILVGDHNQLPPLVQHP 1230
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
A + G+ SLF+ LS+ +PQ+I+ L QYRMC+ IM LSN LIYG RL CG++++A
Sbjct: 1231 NPAIKQGLSRSLFKILSDTYPQSIAELTYQYRMCEEIMLLSNVLIYGGRLKCGTEKVAKQ 1290
Query: 1173 KIKVSDLS----SCSP-----------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNN 1217
+ + + + SP W+ L P VIF+N D +P E + + N
Sbjct: 1291 SLYIPNPNMIEDQISPQYSLKLRKEDLWIDSILKPENKVIFINHDDVPGVERTIGEKVEN 1350
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDK 1276
E LI +I + L ++ IG+++ Y SQ L+ LS VE+ T D++QGRDK
Sbjct: 1351 LTEVDLIKQIVESLTMCGVKESSIGVMSLYRSQLRLLHRGLSHKPDVEVLTADQFQGRDK 1410
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
DCI++S VRS N N LL +W R+NVA+TR+K KLI++GS TL V +L+ +
Sbjct: 1411 DCIIISLVRS--NKDNKVGDLLKEWRRVNVAITRSKSKLIILGSKSTLKSVKMLEAFM 1466
>gi|410912104|ref|XP_003969530.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Takifugu rubripes]
Length = 1123
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 351/1067 (32%), Positives = 545/1067 (51%), Gaps = 128/1067 (11%)
Query: 355 PTDPPENV--NGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWED 412
P P++V +G + + VL+V E RP S K L L E+ + L +
Sbjct: 66 PWKVPDHVILSGGLNNRYWVLDVEE--RPGLKTLTVSCSKTLDL------TEKCL-LKDG 116
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
W T ++ GD V++ G+ + G + RE FL++ PD L+SGT +++S C RR+VL +
Sbjct: 117 WEMTPVSIGDVVHLEGQ-SEGGSWLIDREKGFLVLLPDSLISGTSISSSIRCMRRAVLGD 175
Query: 473 RLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVL--QKNIESLYACGVNE 529
K + +L GT++H +FQ + + + L + A L + + +Y GV++
Sbjct: 176 MFKSFDGGSKQMLNGTMVHDVFQKAATAKDFSSESLSKLASEALCSPQYLPDMYCLGVSQ 235
Query: 530 NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV------------DFGSDGLKKLKISEVT 577
++ + L +P + +W KD + +P D ++ +E+
Sbjct: 236 EEMKQELDVYLPSLEHWA---KDYLNPTSPKAVSLKIPCNSRPPGKSQDATAMVRFTELV 292
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMI-----LPLEFKTGKIPNGQSSMEH 632
DIEE W+P++GLKG ID + +V+I RN N I +PLE KTG+ N S+EH
Sbjct: 293 DIEENVWSPRFGLKGKIDVTAQVQIHRPRNGQNHRIQEERTIPLELKTGRESN---SIEH 349
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAS 692
R+QVILYTL+ ERY ++G L YL++ V+ D L+ RN + I
Sbjct: 350 RSQVILYTLMSLERY--RPEAGFLLYLKNGNLHPVVPSHMDYRELLKLRNTLIHHIQNCV 407
Query: 693 TTQ-------QLPPML-------------------RAYGGNKECSGLG---NMFDSHIYH 723
Q +LP +L RA + +G + H
Sbjct: 408 ARQGEKSRLSRLPDILTNRQPCQYCPQRRNCALYERALDNTTADALVGVVRDFLQQETGH 467
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQV--VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
LT H + HW L LEA M+ + +IW C+ ++ + K
Sbjct: 468 LTPPHLKYFSHWLLLCCLEAAAMETKNTQKKIWLQSPEESEKKGSCVGNMHISGPVVQSK 527
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDR-L 839
F++HF R A+P + L SGD++++S + R +
Sbjct: 528 ----GAFLHHFQR-----------------SCAVPQEGYHINGLVSGDHIVVSDQEGRFV 566
Query: 840 AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNL 899
+A+G + E+++ SVS + D ++R+D E + S NL
Sbjct: 567 GLATGFLCEVNKMFTSVSCTL---------DRDLSKFTGVLFRLDGYEGVVGLSTHLTNL 617
Query: 900 VQLFLQSAQSSQLRRMIVDLEAPRF--DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
L + S++LR ++VDL P F SV ++ + K LN Q++A+ KVL
Sbjct: 618 SSLMENNQDSARLRELVVDLRPPEFICSLSSVLPRETKDTVASILKGLNKPQKQAMKKVL 677
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
+KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KLK + F+R
Sbjct: 678 LSKDYTLIVGMPGTGKTTTICTLVRILYTCGFSVLLTSYTHSAVDNILLKLKRFRVGFLR 737
Query: 1018 IGRHEVVHKEIQKHCLSAM---NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+G+ + VH EI + + ++S+ ++++ ++ VV TC+GI +P+ T ++FD C
Sbjct: 738 LGQAQKVHPEILSYTEESARRRGVHSLSQLEQLYNKELVVGTTCMGIKHPIFTRRRFDFC 797
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q + P+ +GPL +A +FVLVGDH QLPP+VQ+ EAR GM+ SLF+RL E H +
Sbjct: 798 IVDEASQISQPICIGPLFYAKRFVLVGDHQQLPPIVQNQEARSRGMDESLFKRL-ELHSE 856
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK-------VSDLSSCS---- 1183
A+ L QYRM + IM LSN+L+Y RL CGS+ A A I +S+L S S
Sbjct: 857 AVVQLNVQYRMNRQIMSLSNSLMYEGRLECGSERTATALITLPFLPSVLSELGSHSAADP 916
Query: 1184 ----PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
W++ + P PV F++ ++PA E + ++N EA +I K+ L+K +
Sbjct: 917 QQDLAWIQATILPSNPVCFLDCSVVPALETVEQGGISNHTEAVVIRKLLLLLIKAGCKPS 976
Query: 1240 DIGIITPYNSQANLIRHSLSVS---SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIG+I PY Q I L S VE++T+D+YQGRDK I++SFVRS+
Sbjct: 977 DIGVIAPYRQQLRTISGLLQSSVFTGVEVNTVDRYQGRDKSLIILSFVRST-TAEGTLGE 1035
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
LL DW R+NVA+TRAK KL+MVGS TL + ++ L+N + +++ I
Sbjct: 1036 LLKDWRRLNVAITRAKNKLLMVGSATTLQRYSPVEKLLNHLQQENMI 1082
>gi|50302599|ref|XP_451235.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640366|emb|CAH02823.1| KLLA0A05324p [Kluyveromyces lactis]
Length = 1445
Score = 484 bits (1247), Expect = e-133, Method: Compositional matrix adjust.
Identities = 330/1012 (32%), Positives = 542/1012 (53%), Gaps = 129/1012 (12%)
Query: 439 GREN-NFLIVHPDVLVSGTRVAASFSCPRRSVLDERL-KCSERSISALLGTLLHQIFQAG 496
G EN N LIV+PDVL+S T + + C RR+VL + + E S++A+LG ++H + Q
Sbjct: 453 GLENDNLLIVYPDVLLSATAIGTAMDCERRAVLSSKFNEPGEYSLAAVLGNIIHALVQEV 512
Query: 497 L-MKEIPTMKFLEEYARL-VLQKNIESLYA----CGVNENDIHKTLV-EAIPKMLNWIIL 549
L +K + +FL + L +L K I+ CG + + KT+ E +P ++ ++ +
Sbjct: 513 LKLKLLEPNQFLSKGLALEILDKVIKPFTTEVNMCGESVESVIKTISDEHLPFIIEFVNI 572
Query: 550 FKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEI 609
+ + + G+ +KL +S++ DIEE W+ KYGLKG ID ++ ++S +
Sbjct: 573 YVTKDNSRSWIQVIGTKNKRKLSVSQIVDIEENIWSSKYGLKGYIDVTVETNVDSDGKK- 631
Query: 610 NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQ------ 663
++ P+E KTGK S H AQ ++YTLL+ +RY ++ ++ Y + +
Sbjct: 632 --LLAPVEIKTGK----WKSNAHEAQGLIYTLLLQDRYDIPVNLHMMLYTKLREFSLQPK 685
Query: 664 ----TQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNK-----ECSGLG 714
+ ++ R+ L + NE +D +LP M++ ++ C L
Sbjct: 686 ILISLKHLLNLRNKLATYLQVMNEEMSDW--GGPQHELPAMIQNSKCDQCFMKTSCMVLN 743
Query: 715 NMFDS--------HIYHLTTAHC------------SFLRHWDRLIDLEAKEMQVVKNEIW 754
+ D H Y T H SF +DRL+ +E + V + +
Sbjct: 744 KLSDKEQTPGLLKHEYTDLTRHLEAQGSQVLELFRSFYGKYDRLLMMEETSITSVTKDTF 803
Query: 755 CSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL---NASDGDSL 810
G+ TG C+S + + ++ + + R++Y F R++ + NA ++
Sbjct: 804 LMSGTDREAQTGHCISQLTI----KNVQDQGNGRYLYTFCRENDIQGSFATSNAEQQETK 859
Query: 811 IGAAIPTKDMDCTLRSGDYVILSTE-SDRLAVASGLITEISRFHVSV------------- 856
+ P + + GDY+++S + S +LA+ +G ++EI+ + +
Sbjct: 860 KLKSAPPSMLSSDIHKGDYIMISNDTSGQLAIGTGHVSEIANDFIVINCARNILANNIHG 919
Query: 857 -SFSKPLR-------LPGRNSSSDADSLLH-EVWRIDKDEIMTSFSVMRYNLVQLFL--- 904
SF + R L + ++ SL + +RIDK+E T ++ RYNL+ LFL
Sbjct: 920 DSFDRNTRQVVRSVLLKQKEPLNEKQSLTNSHRYRIDKNESATGLTLARYNLLNLFLPEV 979
Query: 905 ---------QSAQSSQL------------RRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
+S + QL RR+IV+L P++ + + ++ P L+
Sbjct: 980 LIEAEFSPQKSGEKLQLPVKRSLGGYSRGRRLIVELSEPKWTTHA--ARIPTLN-----D 1032
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
S N++Q+ AI + LT +DY LILGMPGTGKTS + V L+ +G S+++TSYTNSAVDN
Sbjct: 1033 SFNENQKMAIERSLTCRDYNLILGMPGTGKTSVICELVSILVNQGKSVMVTSYTNSAVDN 1092
Query: 1004 LLIKLKSQ--SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGI 1061
+++KL S+ VR+G VH ++ +C++ M E + + +D +VV VTCLGI
Sbjct: 1093 IIMKLTSRIPRSKMVRLGSGRRVHDLVKPYCITEMLDGDNENLSEIIDAAQVVGVTCLGI 1152
Query: 1062 TNPLLT--DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+P L + FD I+DEA Q +LPV++GPL F KF+LVGDHYQLPPLV+++ AR+NG
Sbjct: 1153 NDPWLQMRNGDFDYVILDEASQVSLPVAIGPLRFGYKFILVGDHYQLPPLVKNSFARDNG 1212
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
++ SLF +L HPQ++ LQ QYRM IM LSN LIYG +L CG+DEI ++ +
Sbjct: 1213 LQESLFEKLCHSHPQSVVELQLQYRMNAEIMSLSNVLIYGGKLQCGTDEIRRQVLQFPNN 1272
Query: 1180 SSCS--PWLKEALNPCRPVIFVNTDMLPA------YEAKDHQTLNNPVEACLIAKITQEL 1231
CS WL++A+NP +PV+ ++ D + E DH L+N EA ++ ++ +EL
Sbjct: 1273 YKCSQDTWLQKAINPEQPVVILDHDGFQSTSNQQFVEQNDHGQLSNVGEANVVNEVVREL 1332
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+ + IE IG+++ Y +Q +L++ +L +++ T D++QGRDKDCI++S VRS NP
Sbjct: 1333 LAHGIEVDQIGVMSMYKAQMSLLKTTLEDLDIDVLTADQFQGRDKDCIIISMVRS--NPD 1390
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
+ LL D RINVA++RAKKKLI++ S + +SK+ LK ++ V + I
Sbjct: 1391 QASGVLLRDLRRINVAVSRAKKKLIIICSWKCISKIHPLKPFVDHVARNNWI 1442
>gi|328875211|gb|EGG23576.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
fasciculatum]
Length = 1556
Score = 484 bits (1246), Expect = e-133, Method: Compositional matrix adjust.
Identities = 338/1065 (31%), Positives = 531/1065 (49%), Gaps = 149/1065 (13%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
K +R L+E+ ER V L+ +W +T I GD NVIGEF + + ++ + N L++HPD+
Sbjct: 526 KTIRGLDEKRQIERTVILFGEWIYTPIQAGDIFNVIGEFVN-NQIEITNQKNLLVLHPDI 584
Query: 452 LVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
L++GT + SFSC RRS+L + E S+ L G ++H+I+Q L T+ + Y
Sbjct: 585 LITGTELGGSFSCSRRSLLKNQF-SGEYSLVPLYGNIVHEIYQKCLASNRFTIDAINIYK 643
Query: 512 RLVLQKNIESLY--ACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
VL SL + GV + H+ + + + + +W LF SQ+ ++
Sbjct: 644 NEVLLDPNYSLKLSSLGVTHQEAHQHVGQWVDVIASWGSLFMSSQNSKRNIMEIDGKNYH 703
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING--------------MILP 615
++I+ V DIEE W+P YGLKG ID+S+ VK+ + N + +P
Sbjct: 704 -VQITRVLDIEENIWSPMYGLKGKIDSSVEVKLTPPYDPNNAKKGKFQPPTEKPIYLNVP 762
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ-----GVM-- 668
LE KTGK P + H +QV++Y L+M++RY ++ GLLYYL++ + G+M
Sbjct: 763 LEIKTGK-PYQVPFISHVSQVLIYILMMNDRYNQNTTLGLLYYLKNKNEKVGKNYGIMHP 821
Query: 669 --VQRSDLVGLIMRRNEFANDIIKAST-----TQQLPPMLR------------------- 702
+ L L + RN + N + + + LP ML+
Sbjct: 822 ILPNVNVLRSLNVARNIYVNYLNQNARPVLVPNPVLPNMLKNPHSCSKCFFSDCCLIYHK 881
Query: 703 -AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ-VVKNEIWCSRGSG 760
G E SG+ ++F HL H FL+ W++LI LE++ + + ++ W
Sbjct: 882 SIENGTPESSGVPDLFKFKTSHLKQTHIDFLKKWNKLITLESESNKNPLIHQTWNYPPIV 941
Query: 761 GNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDM 820
C+ S L D + V G + I +
Sbjct: 942 KEEKGFCIGSCEL----------LDEKVV----------------SGGVIYNFFIKSNAT 975
Query: 821 DCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLP--------GRNSSSD 872
+ + GDYV +S E+ + G + E+ +S+ + + P + S+S
Sbjct: 976 NISFFQGDYVTMSIENLYYGMGFGQVQEMKGNEISIVCREKISEPPTIIEQSHDQKSNSR 1035
Query: 873 ADSLL-------------------------------HEVWRIDKDEIMTSFSVMRYNLVQ 901
SL+ WRIDKDE +S S+++ NL Q
Sbjct: 1036 VKSLIEVEYEDDYSQSTQRKYFSKRDILNRKQGTNNQYTWRIDKDESSSSTSIIKNNLFQ 1095
Query: 902 LFL-------QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
LF+ + ++LR ++VDL P+FD + + D L +LN+DQR AI
Sbjct: 1096 LFMPPTINDERERHMARLRELLVDLVEPQFDPNHLNNIDQNLF-----NNLNNDQRLAIK 1150
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL+AKDYALILGMPGTGK++T+ VK L + ++L+TSY++ ++DNLLIK ++
Sbjct: 1151 KVLSAKDYALILGMPGTGKSTTLSQLVKILSSQKKTMLITSYSHVSLDNLLIKFVEAGVE 1210
Query: 1015 -FVRIGRH-EVVHKEIQKHCLSA-----MNINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
F+R+ + V+ IQK+ + + + + E+K L+ +VA TCLGI +P
Sbjct: 1211 NFLRLSSNINQVNPAIQKYTIDGYQKQLVTTDIIGEMKSFLENQTIVATTCLGINHPYFN 1270
Query: 1068 DKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FD C++DEA Q T P+ G + KF+L GDHYQLPPLV + ++++ GM+ SLF+
Sbjct: 1271 PTRVFDYCLIDEASQITQPICWGLFRYCKKFILFGDHYQLPPLVNNGQSKKLGMDESLFK 1330
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL-----SS 1181
L+ HP ++S L QYRM IM +SN LIY +RL CG + +A + D S
Sbjct: 1331 HLNSAHPNSVSFLYYQYRMNNEIMSISNHLIYNNRLKCGDERVAKGIMNQLDADKIRQSK 1390
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
W+ + P V+FV+ D LP + E N EA +I + + L+
Sbjct: 1391 QEDWVIQCCLPENKVLFVDIDQLPNSKEESIGDLYYNQTEAKMIGQCVRLLIDAGASQSS 1450
Query: 1241 IGIITPYNSQANLIRHSLSVSS-VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
IGII+P Q ++ + ++ V+I TID+YQG+DKDCI++S VR+ N ++ LL
Sbjct: 1451 IGIISPNRIQLKYLKQEMDANTLVDIFTIDRYQGKDKDCIIISMVRN--NDKSLIGDLLK 1508
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
DW R+NV++TRAKKKL++ GS TL+ PL + LI+ + + IL
Sbjct: 1509 DWKRLNVSVTRAKKKLLIFGSRSTLTTDPLYQDLIDHFKKHNWIL 1553
>gi|354543212|emb|CCE39930.1| hypothetical protein CPAR2_603480 [Candida parapsilosis]
Length = 1453
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 324/1018 (31%), Positives = 531/1018 (52%), Gaps = 116/1018 (11%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD-VGRENNFLIVHPDV 451
+L ++N + ++ V L ++ + D +++I D+G + + +N L+++PD+
Sbjct: 422 ILEVINPEKQKKHLV-LRGEYCELDFSVNDIIHIINT--DEGNPNLIDDTHNLLVLNPDI 478
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
LV T++A +CPR++VL R + S+ ++G ++H IFQ ++ E + F+ E
Sbjct: 479 LVPATKIAQQVNCPRKTVLVSRYRFPGTTSVPIIVGEIVHFIFQECMVTETWDLDFMREV 538
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVDFGSDGLK 569
+ ++ + +LY+ + +D+ + + + P + W +K + + + D L
Sbjct: 539 FDNLKEQYLLNLYSIDKDMDDVDQEVEKHFPYLQEWFDSYYKKTANTRSKIEDCSERDLI 598
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING-MILPLEFKTGKIPNGQS 628
+ ++ DIEE +P +GLKGMIDA+I +++K NG +LP+E KTG+
Sbjct: 599 SFAVEDILDIEEEIRSPVFGLKGMIDATIIASLQNK--STNGKFLLPMEIKTGR-----E 651
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI 688
+ H AQ LY LL +RY IDS +L Y + T+ ++ SDL L+ RN +
Sbjct: 652 HVSHSAQASLYALLFKDRYDMEIDSFILVYTKEGVTKRCKIRVSDLRSLLNLRNRVSQHF 711
Query: 689 IKASTTQQLPPMLR-------------------AYGGNKECSGLGNMFDSHIYHLTTAHC 729
+T LP +LR + G KE SG+ D Y L T H
Sbjct: 712 KSGNT---LPDLLRRSSCERCEVVSGCMTINYLSENGCKENSGI----DGDDYELITHHL 764
Query: 730 S------FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
+ + WD LI E + M +W L+++ + SN+ + S
Sbjct: 765 ANPRYKQYFNTWDTLISKEERVMSKSAKTLWTVPSRLREEQGTSLTNLKITDSNDDESS- 823
Query: 784 RDNRFVYHFVRQHMPSPNLN------ASDG-DSLIGAAIPTKDMDCTLRSGDYVILSTES 836
+++F H A DG DS + + L D V++S E
Sbjct: 824 -----IFYFATVHGDKSQARQFLYTFAKDGADSSVNI------LSSKLTINDRVLISDED 872
Query: 837 DRLAVASGLITEISRFHVSVS-------FSKPLRLPGRNSSSDADSLLH----------E 879
A+A+G+I +S +++S + L + ++ +SL+H +
Sbjct: 873 GHFAIATGIIKGLSSQKITISTRRRIVTYDMKLNNFDQKNNQVMESLIHGQAKSRTSGSK 932
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+ IDKDE+ ++ R+N+++LFL + S++LR ++VDL+ P+F Q P
Sbjct: 933 RFIIDKDEMFYGMALARFNVLRLFLPDS-SAELRDLVVDLKTPKFTESK--EQYPF---- 985
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ N Q A+ K A++YALILGMPGTGK++ +V V+ ++ G ++LLTSYTNS
Sbjct: 986 --DSGFNRCQTMALNKAFAAENYALILGMPGTGKSTIIVEMVRKIVTEGKTVLLTSYTNS 1043
Query: 1000 AVDNLLIKL------KSQSIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVK 1052
AVDN+L+K+ ++ F+RIG VHK + K+ I S + + +
Sbjct: 1044 AVDNILLKIVDKMGGDNKDFQFLRIGHPARVHKSLHKYIPDYQEPIKSRSQYRDTYELPN 1103
Query: 1053 VVAVTCLGITNPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV- 1110
+VA TCLGI++ ++FD CI+DEA Q T+PV+LGP+ A KF+LVGDHYQLPPLV
Sbjct: 1104 IVATTCLGISDSCFNLRQEFDYCIVDEASQITVPVNLGPISLAKKFILVGDHYQLPPLVL 1163
Query: 1111 -QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
S+E + +G+ SLF+ L+E H QA+S L QYRMC+ IM++SN L+Y ++L CGS E+
Sbjct: 1164 HPSSEVK-HGLSQSLFKILAEAHSQAVSELTEQYRMCEDIMQVSNILVYENKLKCGSPEV 1222
Query: 1170 ANAKIKV-----------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
A+ +++ SD+ W+ + R V+F++ D++PA E + + NP
Sbjct: 1223 ASQSMRIPHPQAISNFISSDVQQKDQWMDLVFDEHRKVLFLDHDLVPANEIVFGEAIRNP 1282
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKD 1277
EA L+ +I + V ++ IG+++ Y SQ L++ +LS + +EI T D+YQGRDK
Sbjct: 1283 REASLVQQIVKSFVTAGVDESQIGVMSFYRSQLELLKRNLSSRTDLEILTADQYQGRDKQ 1342
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
CI++S VRS N N LL +W R+NVA+TRAK KL+++GS TLS K I+
Sbjct: 1343 CIIISLVRS--NKENNAGDLLKEWRRLNVAVTRAKSKLVILGSRSTLSTNDTTKTFID 1398
>gi|448534407|ref|XP_003870797.1| Dna2 protein [Candida orthopsilosis Co 90-125]
gi|380355152|emb|CCG24669.1| Dna2 protein [Candida orthopsilosis]
Length = 1438
Score = 481 bits (1239), Expect = e-132, Method: Compositional matrix adjust.
Identities = 332/1021 (32%), Positives = 535/1021 (52%), Gaps = 123/1021 (12%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
+L + N + R + L ++ + D ++VI D++ + +N L+++PD+L
Sbjct: 408 ILEVTNADKQKSRLI-LRGEYCELDFSVNDIIHVINT-DERNPNLIDDTHNLLVLNPDIL 465
Query: 453 VSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
++ T++A +CPR++VL R K SI ++G ++H IFQ ++ E ++F+ E
Sbjct: 466 ITATKIAQQVNCPRKTVLVSRYKFPGTTSIPIIVGEMVHYIFQECMVAETWDLQFMREIF 525
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK-K 570
+ ++ + +L D+ + + + +P + W + + P +D S+ +
Sbjct: 526 NDLKEQYLLTLCTIDKGMEDVDQEVEKHLPYLQEWFESYYKKDSKSRPKIDDSSERDQIS 585
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING-MILPLEFKTGKIPNGQSS 629
+ ++ DIEE +P +GLKGMIDA+I + +K +NG +LP+E KTG+
Sbjct: 586 FAVDDILDIEEEIRSPVFGLKGMIDATIIANLSNK--AVNGKYLLPMEIKTGR-----EH 638
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
+ H AQ LY LL +RY IDS +L Y + T+ ++ SDL LI RN + +
Sbjct: 639 ISHSAQASLYALLFKDRYDMDIDSFILVYTREGVTKRCQIRVSDLRSLINLRNRVSQHLR 698
Query: 690 KASTTQQLPPMLR-------------------AYGGNKECSGLGNMFDSHIYHLTTAHCS 730
T LP +LR + G KE SG+ D Y L T H +
Sbjct: 699 SGRT---LPDILRRSSCERCEVVAGCMTINYLSEDGTKENSGI----DEDDYELMTYHLA 751
Query: 731 ------FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNE------ 778
+ R+WD LI E M +W S L+++ + SNE
Sbjct: 752 NLKYKEYFRYWDTLISKEENIMSKSLKHLWTLPNSLREEHGTSLNNLRIIDSNEDESSIF 811
Query: 779 -----HQKSYRDNRFVYHFVR-QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
H + +F+Y F + Q S N+ + L D V++
Sbjct: 812 YIASAHGDKSQAKQFLYTFAKDQADASFNM-----------------LSSKLTINDRVLI 854
Query: 833 STESDRLAVASGLITEI--SRFHVS-----VSFSKPLRLPGRNSSSDADSLLH------- 878
S E A+A+G+I I S+ +S V++ ++ + ++ +SL+H
Sbjct: 855 SDEEGHFAIATGVIKSILPSKITLSTRRRIVTYDMKMKTFNQKNNQIMESLIHGRGKPQA 914
Query: 879 ---EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPA 935
+ + IDKDE+ + RYN++++FL + S++LR ++VDL+AP+F + + +P
Sbjct: 915 SGNKRFIIDKDEMFYGMGLARYNVLRIFLPDS-SAELRDLLVDLKAPKFSNNN----EP- 968
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
Y E N Q A+ KV +A++YALILGMPGTGK++ +V V+ ++ G ++LLTS
Sbjct: 969 --YTL-ESEFNHCQTMALNKVFSAENYALILGMPGTGKSTIIVEMVRRIVEEGKTVLLTS 1025
Query: 996 YTNSAVDNLLIKL-----KSQSIDFVRIGRHEVVHKEIQKHCLS-AMNINSVEEIKKRLD 1049
YTNSAVDN+L+K+ ++ F+RIG VHK + K+ A I S + ++ +
Sbjct: 1026 YTNSAVDNILLKIVEKMGDNKKFKFLRIGYPLRVHKSLHKYIPDYAEPIKSRSQYRETYE 1085
Query: 1050 QVKVVAVTCLGITNPLLT-DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPP 1108
+VA TCLGIT+ ++FD CI+DEA Q T+P++LGP+ A KF+LVGDHYQLPP
Sbjct: 1086 LPNIVATTCLGITDSCFNLRQEFDYCIVDEASQITVPINLGPISLAKKFILVGDHYQLPP 1145
Query: 1109 LV--QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
LV Q+ E + G+ SLF+ L+E HP A+S L QYRMC+ IM++SN L+Y ++L CGS
Sbjct: 1146 LVLHQNAEVK-YGLSQSLFKILAEAHPPAVSELTEQYRMCEDIMQVSNILVYENKLKCGS 1204
Query: 1167 DEIANAKIKV-----------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
+AN + V ++ W+ + R V+F++ D +PAYE + +
Sbjct: 1205 PSVANQCMDVPYPEAVTSFFLPEVPKRHQWMDLVFDKHRKVLFLDHDTVPAYETVFGEAV 1264
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTIDKYQGR 1274
N EA LI +I + V ++ IG+++ Y SQ L++ +LS + +EI T D+YQGR
Sbjct: 1265 RNSREATLIQQIVKAFVTAGVDESQIGVMSFYRSQLELLKRNLSSRTDLEILTADQYQGR 1324
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
DK CI++S VRS+ N +N LL +W R+NVA+TRAK KL+++GS TLS K I
Sbjct: 1325 DKQCIIISLVRSN-NEKNA-GDLLKEWRRLNVAVTRAKSKLVILGSRSTLSTNDTTKTFI 1382
Query: 1335 N 1335
+
Sbjct: 1383 D 1383
>gi|358400527|gb|EHK49853.1| hypothetical protein TRIATDRAFT_234113 [Trichoderma atroviride IMI
206040]
Length = 1459
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 328/981 (33%), Positives = 505/981 (51%), Gaps = 173/981 (17%)
Query: 428 GEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLG 486
GE+ DQ + V P+ LVS T VA SF C RR+VL +R+K SE S + G
Sbjct: 461 GEYVDQ----------YNRVSPEKLVSATVVADSFGCTRRAVLQDRVKATSEASPPLVYG 510
Query: 487 TLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW 546
T+LH+IFQ L+ + +L E ++K+IE LY + + L + ++ W
Sbjct: 511 TMLHEIFQEALLANRFDLGYLSELIDKNIEKHIEDLYTIKMGIAAAKEHLQSKMTELSYW 570
Query: 547 IILFKDSQDLNTPTVDFGSDGLKK-LKISEVTDIEEMAWAPKYGLKGMIDASIRVKI-ES 604
F SQ V+ G +G K + + ++ D+EE W+P YGLKG IDA++ V + +
Sbjct: 571 AKSFVSSQPQADAIVE-GRNGDKATIAVRKLLDVEEHVWSPMYGLKGNIDATVEVMMTDG 629
Query: 605 KRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQT 664
K++++ + +P E KTGK N H AQ LYTLL+S+RY I G+LYY+++ +T
Sbjct: 630 KQSQV--LTVPFEVKTGKHANSN----HMAQTALYTLLLSDRYDIDITHGILYYMETSKT 683
Query: 665 QGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR--------------------AY 704
+ R +L +IM+RN+ A I + S QLPPML+ A
Sbjct: 684 MRIPAIRHELRHMIMQRNQLACYIRERSV--QLPPMLKSKHMCGKCYAKTSCFIYHRLAD 741
Query: 705 GGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHF 764
GG+ E SG+ F + HLT H F W+ L+ E KE Q K E+W S
Sbjct: 742 GGDGETSGMNEKFTEVVKHLTQEHQEFFIKWENLLTKEEKEGQKTKRELWTMTSSEREKK 801
Query: 765 TGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDC 822
+ C S ++++ +++ + + R NRF Y FV++ P P+ + IG+
Sbjct: 802 SRCFSDVIIEEGSASVDEDNPRINRFHYTFVKRE-PMPDF------TFIGSE-------- 846
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNS-SSDADSL 876
L G+ +++S E A+A G IT + + +SV+ + L R PG + + +
Sbjct: 847 -LTVGEPIVVSDEDGHYALAIGYITSVRKQRISVAVDRRLHNARIRQPGFDEVDNQVFAS 905
Query: 877 LHEV--------------------WRIDKDEIMTSFSVMRYNLVQLFLQSAQSS-QLRRM 915
+ EV +R+D+DE + +R NL+Q+ ++ ++R +
Sbjct: 906 IMEVAAEGASVEQSQGKIKEPPIRYRLDQDEFSNGMATVRNNLIQMMANDVPAAVRIREL 965
Query: 916 IVDLEAPRFDSGSVFSQDPALSYIWSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKT 974
IVDLE PRF S A Y ++ +SLN DQ+RAI KV++A+DYAL+LGMPGTGKT
Sbjct: 966 IVDLEPPRFKS-------VATQYTVTDGESLNVDQQRAIEKVMSAQDYALVLGMPGTGKT 1018
Query: 975 STMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-L 1033
+T+ H +KAL+ + ++LLTS+T++AVDN+L+KLKS I +R+G VH E+Q L
Sbjct: 1019 TTIAHIIKALVSQNKTVLLTSHTHTAVDNILLKLKSDKIPILRLGAPAKVHPEVQDFVHL 1078
Query: 1034 SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
+ + EEIK+ +VA T
Sbjct: 1079 AGHPKKTFEEIKEAWHGTPIVATTY----------------------------------- 1103
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
H QLPP+V++ EAR+ G+++SLF+ LS+ HPQ++ L+ QYRMC+ IM LS
Sbjct: 1104 ---------HNQLPPVVKNEEARQGGLDVSLFKLLSDTHPQSVVNLEHQYRMCEDIMTLS 1154
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDL--------------------SSCSP------WLK 1187
N LIY RL CG++E+ K+ + + S C+ WL
Sbjct: 1155 NTLIYNGRLRCGTEELRKKKLHIPSMEALRQHHHDSTTIHRSGTARSFCTGPVPSRCWLY 1214
Query: 1188 EALNPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ L+ V FV+TD + E + + NP E +++++ + L+ + +IG++T
Sbjct: 1215 DLLDAETRVRFVDTDTIRPQVREEAQGKRIINPAEGRIVSQLVESLLTVGVPATEIGVMT 1274
Query: 1246 PYNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHR 1303
Y +Q +L++ L +E+HT D++QGRDK+ I++S VRS+E C LL DW R
Sbjct: 1275 HYRAQLHLLKDKLKYFPGIEMHTTDRFQGRDKEVIVLSLVRSNE---ACNIGDLLKDWRR 1331
Query: 1304 INVALTRAKKKLIMVGSCRTL 1324
INVA TRAK KL++VGS TL
Sbjct: 1332 INVAFTRAKTKLLVVGSMSTL 1352
>gi|449269000|gb|EMC79812.1| DNA2-like helicase, partial [Columba livia]
Length = 952
Score = 481 bits (1237), Expect = e-132, Method: Compositional matrix adjust.
Identities = 334/984 (33%), Positives = 519/984 (52%), Gaps = 111/984 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTV-IAPGDTVNVIG 428
+ VLEVS R + P K L + QS E+ + + + + +V + PGD +++ G
Sbjct: 13 YRVLEVSVIQR-----NGSDPEKHLTITASQSLEDTELCILRNGWESVPVVPGDIIHLEG 67
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER-SISALLGT 487
E + ++ +L+++PD+L+SGT ++ S C RR+VL ER + SE S L+GT
Sbjct: 68 ECSSSTWV-INEQSGYLVLYPDLLLSGTTISNSIRCMRRAVLSERFRGSESGSRQTLIGT 126
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLN 545
+LH+IFQ + + K +EE A ++ QK ++ +Y + + +I + + E +P
Sbjct: 127 ILHEIFQQSVTNNLAQEK-VEELANKIVYGQKYLKEMYHLNLKQAEIMQEVEEYLPSFFK 185
Query: 546 WIILF------KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIR 599
W+ F ++ L + + D K++I ++ DIEE W+P++GLKG ID + R
Sbjct: 186 WVEDFMHNPANQNKMQLKLSSEEKTQDFSSKIEIEDILDIEENIWSPRFGLKGKIDVTAR 245
Query: 600 VKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYL 659
VKI +++ + I+PLE K+GK N S+EHR+QVILYTLL ER + ++G L YL
Sbjct: 246 VKIH-RQSGVQSRIMPLEIKSGKESN---SIEHRSQVILYTLLNLERRVDP-EAGFLLYL 300
Query: 660 QSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTT-----QQ-----LPPMLRAYGGNKE 709
++ V R D L+ RN A ++ +++ QQ LPP++ K
Sbjct: 301 KTGTMYPVSGARMDRRELMKLRNHVAFYLMHSTSKSAVGRQQSELAALPPVIDDSQACKY 360
Query: 710 CSGLGNMF-----------------------DSHIYHLTTAHCSFLRHWDRLIDLEAKEM 746
CS + N F + HL +H + W R++ LE +
Sbjct: 361 CSQIHNCFLYSRAVEQKMGNVSCPPAMVPVIERETQHLKPSHLEYFSLWYRMLTLELQSG 420
Query: 747 QVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNA 804
+ K IW C+ +++ E Q+ Y + ++++ F R++ P N
Sbjct: 421 ESRKGYKNIWMMSSLEREKAGDCVGNMI--RVGEVQEIY-EGQYLHFFQRKNGAIPGTN- 476
Query: 805 SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR 863
L GD V++S E D L +A+G + +S VS
Sbjct: 477 -------------------LLVGDRVVVSGEEDGLLGLATGYVRGVSAAKVSC------- 510
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPR 923
L GRN S + +R+D +E V NL +L S S +LR +++D P
Sbjct: 511 LLGRNLSKLPKT---TTFRLDHEEGDFGIGVPFENLSKLMKDSPVSERLRNLVIDFHKPH 567
Query: 924 FDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
F SV + + K LN Q++A+ +VL +KDY LI+GMPGTGKT+T+ V
Sbjct: 568 FIQHLSSVLPPEAKETVANILKGLNKPQKQAMKQVLLSKDYTLIVGMPGTGKTTTICALV 627
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAM 1036
+ L G S+LLTS+T++AVDN+L+KL + F+R+GR + VH +I+K C S
Sbjct: 628 RILSACGFSVLLTSFTHTAVDNILLKLAKFKVGFLRLGRAQKVHPDIRKFTEEEICRSK- 686
Query: 1037 NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
+I SV ++++ + VVA +C+G+ +P+ K+FD CI+DEA Q + + LGPL + +
Sbjct: 687 SIKSVMDLEEVYNSQPVVATSCMGVNHPIFAQKQFDFCIVDEASQISQLICLGPLFCSKR 746
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
FVLVGDH QLPPLV + EAR+ GM SLF+RL E++ A+ L QYRM IM LSN L
Sbjct: 747 FVLVGDHQQLPPLVLNAEARDLGMSESLFKRL-EQNQNAVVQLTVQYRMNSKIMSLSNML 805
Query: 1157 IYGDRLSCGSDEIANA--------KIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+Y +L CGS++++NA K+K+ + WLKE L+P PV F+NT+ +PA E
Sbjct: 806 VYEGKLECGSEKVSNATVNLPNLKKLKLELADASKTWLKEVLDPDTPVCFLNTEKVPAPE 865
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH---SLSVSSVEI 1265
+ ++N EA L+ +T +K + DIGII+PY Q I L S VE+
Sbjct: 866 KAEKGGVSNVTEAKLVLFLTSLFIKAGCKPSDIGIISPYRHQLKTITDLMAKLKESRVEV 925
Query: 1266 HTIDKYQGRDKDCILVSFVRSSEN 1289
+T+DKYQGRDK I+VSFVR+S +
Sbjct: 926 NTVDKYQGRDKSIIIVSFVRNSND 949
>gi|260950609|ref|XP_002619601.1| hypothetical protein CLUG_00760 [Clavispora lusitaniae ATCC 42720]
gi|238847173|gb|EEQ36637.1| hypothetical protein CLUG_00760 [Clavispora lusitaniae ATCC 42720]
Length = 1489
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 324/991 (32%), Positives = 510/991 (51%), Gaps = 116/991 (11%)
Query: 421 GDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDER-LKCSER 479
GD +N+I + K V NN +I +PD L+S T VA CPR++V+++R + E
Sbjct: 497 GDIINIIITSPESPKL-VDNNNNLIIWNPDTLISSTVVADQLFCPRKTVMNKRYVFPGEA 555
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA 539
+I ++GT +H+IFQA + E + +++E+ + ++ + +Y+ G D+ + +
Sbjct: 556 TIPLIVGTTVHEIFQACFITEQSSPEYMEQLLEVETKRRLLEIYSMG----DVLEETKDR 611
Query: 540 IPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS--EVTDIEEMAWAPKYGLKGMIDAS 597
I K ++I + ++ P++ + + +K S +V D+EE W+P +G+KGM D +
Sbjct: 612 IRKHFSFIEKWFNTFFKKPPSIIPTNKHQQNIKFSVADVLDVEESIWSPMFGIKGMADVT 671
Query: 598 IRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
++ +E + + +LP+E KT K + H AQ LY+LL +RY +I S L+
Sbjct: 672 LKANLEGE-SATGQFLLPMEIKTSK-----EYLSHHAQAALYSLLFKDRYNANISSFLMV 725
Query: 658 YLQSD-QTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYG----------- 705
Y + T+ + DL L+ RN + I S T++LP ++R
Sbjct: 726 YTSEEGSTKKHDISIPDLRSLVNLRNRISPYI--KSGTRELPDIMRQQKCDNCVIQSSCM 783
Query: 706 --------GNKECSGLGN-MFDSHIYHLTT--AHCSFLRHWDRLIDLEAKEMQVVKNEIW 754
G E SGL + +++ HL + +L +WD L+ E + + ++W
Sbjct: 784 TVNYLLEHGTPENSGLNDGVYEDLTEHLVQRQEYSDYLNYWDDLLTSEEEFVSRFNKDLW 843
Query: 755 CSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDN--RFVYHFVRQHMPSPNLNASDGDSLI 811
G LS +++ +E + DN F+Y F R+ +
Sbjct: 844 ILTSKEREEEQGKALSGMIITEKSE----FVDNTSEFIYKFQRRDFKN------------ 887
Query: 812 GAAIPTKDMDCTLRSG-DYVILSTESDRLAVASGLITEIS-------------------- 850
+ +D T+ S D VI+S ES A+A G + I
Sbjct: 888 -----IRPIDATIISKYDRVIISDESGHFALAQGFVKHIDCGCIIISTRRKLVSTEVKND 942
Query: 851 RFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSS 910
RFH + P ++ S ++RIDKDE+ V R+N++ LFL+ +
Sbjct: 943 RFHRAAVLR-----PTQSQSPQGTQTETVIFRIDKDEMFYGMGVARFNILNLFLRDGDTK 997
Query: 911 QLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPG 970
+ R++IVDL+ PRF V + + N DQ RA KV KDY LILGMPG
Sbjct: 998 R-RKLIVDLDTPRFSPVPVAN--------VKKDHFNSDQIRAFNKVFQTKDYCLILGMPG 1048
Query: 971 TGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK 1030
TGKT+ + H ++ L+ S+LL+SYTNSAVDN+L+K+K IDF+RIG VH +I+
Sbjct: 1049 TGKTTVIAHLIRMLVEEKKSVLLSSYTNSAVDNILLKVKEFGIDFIRIGNTSRVHPDIRP 1108
Query: 1031 HCLSAMN--INSVEEIKKRLDQVKVVAVTCLGITNPLL-TDKKFDVCIMDEAGQTTLPVS 1087
+ + + + E+ + + VVA TCL + + ++FD CI+DEA Q ++P+S
Sbjct: 1109 YIPGSDEKCVENYEDFIRIYQKPLVVAATCLSMRDLAFNVRERFDYCIVDEASQVSMPLS 1168
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
LGPL KFVLVGDHYQLPPLV + G+ SLF+ L++EHPQ+I L QYRMC
Sbjct: 1169 LGPLSRCDKFVLVGDHYQLPPLVVHPNVNVKKGLSRSLFQILADEHPQSIVELSFQYRMC 1228
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSD-------LSSCSP----WLKEALNPCRP 1195
+ IM +SNAL+Y +RL CGS+ +A + + + + SP WL + P
Sbjct: 1229 KEIMLISNALVYNNRLQCGSETVAKQSLTIPNPEALAAYIDPRSPLSHRWLSDVFKPENK 1288
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
V+F+N D + AYE K + ++N VE LI +I + L ++ IG++T Y SQ L+
Sbjct: 1289 VLFLNHDNMNAYERKVGENVSNLVEVELIRQIVESLCLCGVDESKIGVMTLYRSQLKLLV 1348
Query: 1256 HSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+EI T D++QGRDK+CI++SFVRS++ R LL DW R+NVA+TRA+ K
Sbjct: 1349 QCFKHRPRLEILTADRFQGRDKECIIISFVRSNKEKR--VGDLLKDWRRVNVAVTRARSK 1406
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LI V S TLS +K + +++ I N
Sbjct: 1407 LITVASKSTLSHADSIKDFVYLAEQKNWIYN 1437
>gi|169608259|ref|XP_001797549.1| hypothetical protein SNOG_07199 [Phaeosphaeria nodorum SN15]
gi|160701604|gb|EAT85850.2| hypothetical protein SNOG_07199 [Phaeosphaeria nodorum SN15]
Length = 1484
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 318/1015 (31%), Positives = 501/1015 (49%), Gaps = 209/1015 (20%)
Query: 393 VLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVL 452
VL + E++ +A+ L + WF T P V++IGEF G+C V NN +I+HPD L
Sbjct: 502 VLLVEEEKTKLFKAITLRQAWFDTPCTPSSFVHIIGEFSSTGQCIVDDHNNMIILHPDHL 561
Query: 453 VSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYA 511
+S T VA SF C RR+VL +R+K + ++ + +L GTLLH++FQ L FL E
Sbjct: 562 ISATVVADSFGCLRRAVLQDRVKATSKANAPMLYGTLLHELFQEALKVNRWDSDFLLETI 621
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
+L E++ + + L +P++ W +F ++ V + +
Sbjct: 622 DKLLPTKFETILEIVSTCEAVKEHLSSKLPELQAWAEIFVRAEPRADAIVRERNGRQSTM 681
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
I+++ D+EE W+P +IDA + G+ + + +
Sbjct: 682 SINKLLDVEEHVWSPITYFP-LIDAVL-----------TGVDVDIAY------------- 716
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA---NDI 688
G+LYYL++ + R+D++ +I++RNE A D
Sbjct: 717 ----------------------GVLYYLETSDISRIPAIRNDIIHMIIKRNELACYVRDR 754
Query: 689 IKASTTQQLPPMLRAYGGNKEC--------------SGLGNM--------FDSHIYHLTT 726
I +LPP+L+ ++C G G +D + L
Sbjct: 755 I------ELPPILKEDFKCQKCYAQEPCFLYDNLVEGGKGEQLNKKAKERYDELVKPLKP 808
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYR 784
+H F++ WD L+ E +M + E+W + C S+++L+ + E + +
Sbjct: 809 SHQEFMKKWDTLLTKEETDMMKFRRELWTMLSTEREKLGRCFSNVILEPGSGYEEKAGQK 868
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
NR+ Y FV+Q P + ++ +IG + V++S E A+A+G
Sbjct: 869 INRYSYTFVKQQA-KPGFSFTESQLIIG---------------EPVVVSDEQGHFALANG 912
Query: 845 LITEISRFHVSVSFSKPL-----RLPGRNSSSDAD-SLLHEV------------------ 880
+T + + ++V+ + L +LPG +S ++ + + EV
Sbjct: 913 YVTNVRKRRITVAVDRRLHNSRTKLPGFHSQTNQTFTGIMEVGKEGEPVPEYEANEEPVL 972
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
+R+DKDE + R NL+Q+ SVF
Sbjct: 973 YRLDKDEFSNGMAAARNNLIQIM----------------------DDSVF---------- 1000
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ S+N DQ+ AI KV++AKD AL+LGMPGTGKT+T+ H ++ L+ +G S+LLTSYT++A
Sbjct: 1001 -KVSMNSDQKAAITKVMSAKDCALVLGMPGTGKTTTIAHIIRTLVAKGKSVLLTSYTHTA 1059
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN+L+K+KS I +R+G +H ++++ L+A +S+E ++K + VVA TCL
Sbjct: 1060 VDNILLKIKSDKIGILRLGASAKIHPDVREFATLAAEPKDSLEALEKSWMEPPVVATTCL 1119
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
I +PL + FD CI+DEA Q TLPV LGP+ + KF+LVGDHYQLPPLVQ+ EA E G
Sbjct: 1120 TINHPLFNRRIFDYCIVDEASQITLPVCLGPIRMSRKFILVGDHYQLPPLVQNKEAMEGG 1179
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+++SLF+ L E HPQA+ +L+ QYRMC IM LSN IY RL C
Sbjct: 1180 LDVSLFKMLCEAHPQAVVSLEHQYRMCADIMLLSNTFIYSGRLKC--------------- 1224
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
+F+NTD++ + E + + N +EA L+ ++T L+ +
Sbjct: 1225 -----------------VFINTDLISQSLEDQSGSRITNTLEARLVTQLTVSLLSLGVSA 1267
Query: 1239 KDIGIITPYNSQANLIRHSLS-------------------VSSVEIHTIDKYQGRDKDCI 1279
++GII Y SQ L+R SLS + VE+HT DK+QGRDK+ +
Sbjct: 1268 NEVGIIAFYRSQLALLRTSLSSAHTQTQASELAAPAVGPGCAGVELHTADKFQGRDKEVV 1327
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+VS VRS+EN + LL D R+NVALTRA+ KLI++GS +TLS LL+ +I
Sbjct: 1328 IVSCVRSNEN--SIVGDLLKDRRRVNVALTRARSKLIILGSEKTLSNNELLRDMI 1380
>gi|358380541|gb|EHK18219.1| hypothetical protein TRIVIDRAFT_159356 [Trichoderma virens Gv29-8]
Length = 1453
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 320/959 (33%), Positives = 495/959 (51%), Gaps = 161/959 (16%)
Query: 449 PDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFL 507
P+ LVS T VA SF C RR+VL +R+K SE S + GT+LH+IFQ L+ + L
Sbjct: 469 PEKLVSATVVADSFGCMRRAVLQDRVKATSEASPPLVYGTMLHEIFQEALLANKFDLPSL 528
Query: 508 EEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDG 567
+ ++K+IE LY V + L + ++ W F Q V+ +
Sbjct: 529 AQLIDKNIEKHIEDLYTIKVGVAAAKEHLQSKMTELSYWARSFVAPQPQADAIVEGRNGD 588
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI-ESKRNEINGMILPLEFKTGKIPNG 626
+ + ++ D+EE W+P YGLKG IDA++ V + + K++++ + +P E KTGK N
Sbjct: 589 RATIAVRKLLDVEEHVWSPMYGLKGNIDATVEVAMTDGKQSQV--LTVPFEVKTGKHANS 646
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
H AQ LYTLL+S+RY I G+LYY+++ +T + R +L ++M+RN+ A
Sbjct: 647 N----HMAQTALYTLLLSDRYDIDIAYGILYYMETSKTMRIPAIRHELRHMVMQRNQLAC 702
Query: 687 DIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTT 726
I + S QLPPML+ A GN E SG+ FD I HLT
Sbjct: 703 YIRERSV--QLPPMLKSKHMCGKCYAKTSCFIYHRLADDGNGESSGMNEKFDEVIKHLTP 760
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYR 784
H F W+ L+ E KE Q K E+W + + C S ++++ +++ + + R
Sbjct: 761 KHQDFFIKWENLLTKEEKEGQKTKRELWTMTSTEREKKSRCFSDVIIEEGSASVDEDNPR 820
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
NR+ Y F+++ P PN + IG+ L G+ V++S E A+A G
Sbjct: 821 INRYHYTFIKRE-PPPNF------TFIGSE---------LTVGEPVVVSDEEGHYALAIG 864
Query: 845 LITEISRFHVSVSFSKPL-----RLPGRNSSSD-ADSLLHEV------------------ 880
IT + + +SV+ + L R PG + +++ + + EV
Sbjct: 865 YITSVRKQRISVAVDRRLHNARIRQPGFDEANNQVFASIMEVAPEGASVDQSQGKIKEPP 924
Query: 881 --WRIDKDEIMTSFSVMRYNLVQLFLQSAQSS-QLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+D+DE + +R NL+Q+ ++ Q+R +IVDL PRF + A
Sbjct: 925 IRYRLDQDEFSNGMATVRNNLIQMMANDVPAAVQIRNLIVDLIPPRFKTV-------ATQ 977
Query: 938 YIWSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
Y ++ ++LN DQ+RAI KV++A+DYAL+LGMPGTGKT+T+ H +KAL+ + ++LLTS+
Sbjct: 978 YTVTDGENLNVDQQRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIKALVSQNKTVLLTSH 1037
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVA 1055
T++AVDN+L+KLKS I +R+G VH E+Q L+ + EEIK+
Sbjct: 1038 THTAVDNILLKLKSDKIPILRLGAPAKVHPEVQDFVHLAGQPKKTFEEIKE--------- 1088
Query: 1056 VTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
A FVLVGDH QLPP+V++ EA
Sbjct: 1089 -----------------------------------AWHARTFVLVGDHNQLPPVVKNEEA 1113
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
R+ G+++SLF+ LS+ HPQ++ L+ QYRMC+ IM LSN LIY RL CG++ + K+
Sbjct: 1114 RQGGLDVSLFKLLSDTHPQSVVNLEHQYRMCEDIMTLSNTLIYNGRLRCGTESLRKKKLH 1173
Query: 1176 VSDLSS--------------------CSP------WLKEALNPCRPVIFVNTDML--PAY 1207
+ + S C+ WL + L+ V FV+TD +
Sbjct: 1174 IPSMESLRQRHHDSTTIHRSGATGSFCTGPAPSRCWLYDLLDAEARVRFVDTDTIRPSVR 1233
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIH 1266
E + + N E +++++ + L+ + +IG++T Y +Q +L++ L VE+H
Sbjct: 1234 EEAQGKRIINSAEGQVVSQLVESLLTVGVPATEIGVMTHYRAQLHLLKDKLKHFPGVEMH 1293
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
T D++QGRDK+ I++S VRS+E C LL DW RINVA TRAK KL++VGS TL
Sbjct: 1294 TTDRFQGRDKEVIVLSLVRSNE---ACNIGDLLKDWRRINVAFTRAKTKLLVVGSMNTL 1349
>gi|401625382|gb|EJS43392.1| dna2p [Saccharomyces arboricola H-6]
Length = 1527
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 334/1047 (31%), Positives = 537/1047 (51%), Gaps = 135/1047 (12%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
G++ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 453 GDQTSVVVRHPWVYLEFEAGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 512
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
S T V +S C RR+VL + + E S+ LG ++H++ Q + ++ K L E
Sbjct: 513 FSATSVGSSVGCLRRAVLQMKFQDPRGEPSLVMTLGNIVHELLQDSIKFKLSHSKILMEN 572
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPK-----MLNWIILFKDSQDLNTPTVDFGS 565
L +E+ + N+ +T+ + I K +L ++ F + T G+
Sbjct: 573 IVKKLDSLLETYAFSIMISNEEVQTVRDLIMKEHAENILYFVNKFVSKSNYGCYTSVSGT 632
Query: 566 DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
+ + IS V DIEE W+P YGLKG +DA++ +E+ + I+PLE KTGK
Sbjct: 633 RRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENGQK----FIVPLEVKTGK--- 685
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S+ + Q ++YTLL+++RY I+ LLY+ + D + ++M RN +
Sbjct: 686 -SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDDNMTKFPSILHSIKHILMSRNRMS 744
Query: 686 NDII--------KASTTQQLPPMLR-------------------AYGGNKECSGL-GNMF 717
+A T +LPP+LR G E SGL F
Sbjct: 745 MSFKHQLQEVSEQARTKFELPPLLRDSSCDSCFMKESCMVFNKLLENGTSEESGLIEGEF 804
Query: 718 DSHIYHLTT---AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVL 773
D+ HL + F ++ LI E + + E++ G +G CLS++++
Sbjct: 805 DTITDHLVPNLPIYKEFFTKYNDLITKEESSITCINKELFLLDGLTRESRSGRCLSNLIV 864
Query: 774 DASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
E ++ ++ ++Y F+R++ S+ S++ + I D+VI+S
Sbjct: 865 SEMTEDKE--KEGTYLYCFLRRN------KGSNTQSMLYSQITV---------NDFVIIS 907
Query: 834 TESDRLAVASGLITEISRFHVSVSFSKPL---RLPGR-----------NSSSDADSLLHE 879
E + G + I+ V +S + L RL R +S D +L+
Sbjct: 908 DEEGHFCLCQGRVQFINPDKVGISVKRKLLNNRLLDREKGITTIQSVVDSECDQSNLIAT 967
Query: 880 ----VWRIDKDEIMTSFSVMRYNLVQLFLQS----------------------AQSSQLR 913
+RIDK++I S S+ R+NL+ LFL + + LR
Sbjct: 968 QNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVPPGLDITDDRSKLTRKTKRSDGGNETLR 1027
Query: 914 RMIVDLEAPRFDSGSVFSQDPALSYIWSEK-SLNDDQRRAIIKVLTAKDYALILGMPGTG 972
++VD +AP+F + DP + Y E +LN +Q++AI KV+ A+DYALILGMPGTG
Sbjct: 1028 SLLVDNKAPKFRDTN---DDPVIPYKLPEDIALNVNQKQAIDKVMRAEDYALILGMPGTG 1084
Query: 973 KTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
KT+ + +K L+ +G S+LLTSYT+SAVDN+LIKL SI+ +R+G VH E QK+
Sbjct: 1085 KTTVIAEIIKILVSKGKSVLLTSYTHSAVDNILIKLNETSINIMRLGLKHKVHPETQKYV 1144
Query: 1033 LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLGP 1090
+ ++ + + +++ + VVA TCLGI + L T +K FD I+DEA Q ++PV+LGP
Sbjct: 1145 PNYESVENYNDYLTKINNISVVATTCLGINDILFTIHEKDFDYVILDEASQISMPVALGP 1204
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
L + KF++VGDHYQLPPL+++T AR G+E SLF+ E HP++++ L QYRMC I+
Sbjct: 1205 LRYGCKFIMVGDHYQLPPLIKNTPARLGGLEESLFKTFCENHPESVTELTYQYRMCGDIV 1264
Query: 1151 ELSNALIYGDRLSCGSDE--IANAKIKVSDLSS--------CSPWLKEALNPCRPVIFVN 1200
LSN LIY ++L CG++E + + K+ + D S WL++ L P R VIF++
Sbjct: 1265 TLSNFLIYDNKLKCGNNEVFVQSLKLPIPDALSHYRVNSVESKEWLEDILEPNRKVIFLD 1324
Query: 1201 TDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL- 1258
D E + + N E L + Q ++ + I +DIG++T Y +Q L++
Sbjct: 1325 YDKCTDIMEQSEKDNITNVGEVELTLQCVQGMILSGILCEDIGVMTLYRAQLRLLKKKFN 1384
Query: 1259 --SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+ +EI T D++QGRDK CI++S VR N + SLL + R+NVA+TRAK KLI
Sbjct: 1385 KGAYKGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGSLLRELRRVNVAMTRAKSKLI 1442
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQSGI 1343
++GS T+ VP +K +N + E++ I
Sbjct: 1443 IIGSKSTIGSVPEIKSFVNLLEERNWI 1469
>gi|393245230|gb|EJD52741.1| Dna2-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1134
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 325/990 (32%), Positives = 496/990 (50%), Gaps = 132/990 (13%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGK-----CDVGRENNFLI 446
KVLR + + L +DW T GD ++++G G ++ L+
Sbjct: 144 KVLRATRAAPDDMLKITLRDDWVLTRAHKGDVLHILGHVSTHTTPPSIVLSAGTASS-LV 202
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQIFQAGLMKEIPTM 504
+HPDVL++ T V+ S C R+ VL + L + + + + G +LH++ QA + +
Sbjct: 203 LHPDVLLTATHVSTSHRCARKPVLAQLLPGAGPDSAPAVAWGNMLHEVVQACFTERNFSQ 262
Query: 505 KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF-KDSQDLNTPTVDF 563
F++ + ++ L GV + L + + F D+ + D
Sbjct: 263 IFVDARIDEAVDASLADLARIGVTADAARDELHRRSAGLQAFSQRFVADAPREDAVVTDL 322
Query: 564 GSDGLKK--LKISEVTDIEEMAWAPKYGLKGMIDASIRVKI-ESKRNEINGMILPLEFKT 620
G+ ++ + ++ V IEE W+P+YGLKG +DAS++ E + P E KT
Sbjct: 323 GAPSSQRALVALTGVNAIEEDIWSPRYGLKGKVDASVQTSTKEGPDGVVTEWTQPFEIKT 382
Query: 621 GKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMR 680
G+ G +EHRAQ +LY LLM+ERY + +GLLYY QS + V V+R D+ L++
Sbjct: 383 GRSIAG---LEHRAQTMLYALLMAERYGVEVPNGLLYYTQSSELIRVPVRRHDVRALMIS 439
Query: 681 RNEFA-------NDIIKASTTQQ-LPPMLRAYGGNKECSGLG------------------ 714
RNE A D KAS LPP + C +
Sbjct: 440 RNEMAAFIASRWRDGYKASEANDFLPPPIDDEHACGRCFNVDACMLYRKAVERNPVAPND 499
Query: 715 ---NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWC----SRGSGGNHFTGC 767
++ HLT A C F HW+RLI LE +M + E+W R G F+
Sbjct: 500 EVFGIWLDKTRHLTDAQCEFFAHWERLIALEEADMTRFRRELWTMTAREREIRGRAFSDL 559
Query: 768 LSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
+ + V S D R +Y F R+ P DSL+ I G
Sbjct: 560 VLAPVAVTSE-------DKRHLYTFKRRGGPGVLT-----DSLLTGHIS---------RG 598
Query: 828 DYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGR--NSSSDADSLLHEVWRIDK 885
D V ++ E D +A A G + E++ +V++ +P++L GR D++ V+RIDK
Sbjct: 599 DAVTVTVEPDLIAFARGFVVELNPDNVTIGVDQPMQLDGRILAGRGGKDAV---VFRIDK 655
Query: 886 DEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS-GSVFSQDPALSYIWSEKS 944
DE+ + +R NL +LF++ Q R+++VDLEAPRFD ++P
Sbjct: 656 DELAGGIARIRDNLARLFIKGG-DEQRRKLVVDLEAPRFDELDESVGRNP---------K 705
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q+ A+ KV+ A+DYAL+LGMPGTGKT+T + + +G S+LLTSYT+SAVD +
Sbjct: 706 LNLHQQAAVRKVMAAQDYALVLGMPGTGKTTTTAEIIHQFVEQGKSVLLTSYTHSAVDTI 765
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNI-NSVEEIKKRLDQVKVVAVTCLGITN 1063
L L D +R+G+ + VH +++K+ L A ++E+ + R+ VVA TCL I
Sbjct: 766 LRTLGKVDFDILRLGKVDKVHPDVRKYTLDARGPPKTLEQYEGRIMTPLVVATTCLSI-- 823
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
D Y L PLV+ST AR++G+++S
Sbjct: 824 --------------------------------------DQY-LAPLVRSTRARKDGLDVS 844
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC- 1182
LFRRL E HP+A++ L QYRM + IM LSN L+Y RL CGS+ +A ++V+D C
Sbjct: 845 LFRRLCEAHPEAVADLALQYRMNEDIMTLSNELVYNGRLLCGSEHVARQALRVNDQVKCM 904
Query: 1183 -SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
W++ ++ V+F++TD +PA E K ++N VE L+ +I L+ + DI
Sbjct: 905 EGCWIERVVSESTKVLFIDTDAVPAVETKIADLVHNDVEVQLMQQICDALIARGVNETDI 964
Query: 1242 GIITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
G+I+ Y Q ++H+L S +E+ T+D+ QGRDK+C+LVS VRS N T LL D
Sbjct: 965 GVISLYRQQLKALQHALQARSKLEVMTVDRSQGRDKECVLVSMVRS--NAEGDTGELLKD 1022
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
W RINVALTRA++KL++VGS +TL K+ +L
Sbjct: 1023 WRRINVALTRARRKLVIVGSRKTLDKIEVL 1052
>gi|443894171|dbj|GAC71521.1| hypothetical protein PANT_3d00079 [Pseudozyma antarctica T-34]
Length = 2022
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 337/1126 (29%), Positives = 527/1126 (46%), Gaps = 240/1126 (21%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKE 500
+N L+VHPDVLV T+VA SC R+ V+ +RL+ S+ ++S ++G +LH++ QA L
Sbjct: 904 DNLLVVHPDVLVPATKVADVASCIRKPVVQDRLRGASDTTVSLVMGNMLHELLQACLTAP 963
Query: 501 IP--------------------------------------TMKFLEEYARLVLQKNIESL 522
P + F++ ++ N+ESL
Sbjct: 964 PPPTSQTFPPPKIEDGDSMPTAEVKTVSPWPERWQGIGDFSRAFVDHQIEEQVRSNVESL 1023
Query: 523 YACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNT--PTVDF-----GSDGL-KKLKIS 574
YA ++ + L E + +F D + P + G + K++I
Sbjct: 1024 YAIELSAEEATAQLREKAAAFARFAHVFLQHDDEASFHPEANLREQSRGPGSMPAKVRIR 1083
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRV------------KIESKRN--------------- 607
+ D+EE W+P +GLKG +D S+ K+ S N
Sbjct: 1084 RILDVEEEIWSPAFGLKGKVDVSVECDIADGSDAKPSRKVGSNSNGAFARGVQKQDSEAP 1143
Query: 608 ---EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQT 664
++ ++PLE KTG+ S EHRAQ +LYTL+MS+RY + GLLYY +S +
Sbjct: 1144 PASKVTASVVPLELKTGRAE--VVSTEHRAQTMLYTLMMSDRYATRVSDGLLYYSKSGEM 1201
Query: 665 QGVMVQRSDLVGLIMRRNEFAN--------------DIIKASTTQQLPPML-------RA 703
+ R+++ LI+ RNE A+ + + + LPP + R
Sbjct: 1202 HRISRSRNEVRSLIIGRNELAHYLRHNPSRLAKPDPEATQTDRVRVLPPTIDSEYKCRRC 1261
Query: 704 YG-------------------------------GNKECSG----------LGNMFDSHIY 722
Y G E G + ++++
Sbjct: 1262 YAVDGCMLFRRAIENVVEPKEESNTLNEDVSKLGAAEAQGTDLVLARRTPIADVYEQKTS 1321
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD-------- 774
HLT H F R WDRL++LE ++ ++ E+W C +++ LD
Sbjct: 1322 HLTPVHLDFFRKWDRLLNLEEEDAVRIRREMWTMSAEQREKAGRCFANMRLDLDALQPDE 1381
Query: 775 -ASNEHQKSYRDNRFVYHFVRQ-HMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
++ S R V+ FVR HM G A + + D V +
Sbjct: 1382 ASTAPASSSSSMRRVVHRFVRHCHM--------------GQAAEASVLAGHISVNDPVTI 1427
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRNSSSDADSLL-------HEV 880
S E D L+VA G +T ++ V + PL R R+++ D + V
Sbjct: 1428 SIEPDMLSVAQGFVTRLTPTSVDIGLDHPLDAVMQRALERDAAGSVDGPVGLEVAADRMV 1487
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRR--MIVDLEAPRF-DSGSVFSQDPALS 937
+RIDKDE + +R NL LFL + ++R ++VD+ APRF + G ++
Sbjct: 1488 FRIDKDEFGSGMGRVRANLAALFLTPQRGGDVKRRELVVDMRAPRFVEHGQDQRVRATVA 1547
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
++ SLN+DQR AI KVL+A+DYAL+LGMPGTGKT+T+ ++ L+ G ILLTSYT
Sbjct: 1548 EARADASLNEDQRVAIDKVLSAQDYALVLGMPGTGKTTTIAKLIQLLVRLGKRILLTSYT 1607
Query: 998 NSAVDNLLIKL--------KSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
+SAVD +L KL + +++ +R+G + VH + + L +++EE+++ +
Sbjct: 1608 HSAVDTILRKLAEDQPAKGEEEAMRILRLGSRDKVHADAHQFLLP--RCSTLEELREAFE 1665
Query: 1050 QVKVVAVTCLGITNPLLT------------------------DKKFDVCIMDEAGQTTLP 1085
VVA TCL + + + + FD CI+DEA Q LP
Sbjct: 1666 SPNVVAATCLSVHHTFFSSGMAKLRSRRGADSPSESAADAAPEYLFDYCIVDEASQIPLP 1725
Query: 1086 VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA-ISALQSQYR 1144
LGPL FA KFVLVGDH+QLPPLV++ EA+ G+++SLF+ L E H A + AL+SQYR
Sbjct: 1726 TCLGPLRFADKFVLVGDHHQLPPLVKNAEAKAGGLDVSLFKLLCERHGDASMVALRSQYR 1785
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC------SPWLKEALNPCRPVIF 1198
M IM L+N L+Y +L G++++ + ++++ L + W++E L P V F
Sbjct: 1786 MNADIMRLANELVYSGQLRAGTEQVRDRRLELPHLEAALQGAEVGGWMEEVLKPESKVRF 1845
Query: 1199 VNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
V+T LP E+K + + N EA L+ I + L++ IG++TPY Q L+R
Sbjct: 1846 VDTAGLPLEVVGESKHGELVKNQFEAELVISIAEALLRAGCIADQIGVVTPYRQQIKLLR 1905
Query: 1256 HSLSVSS----------VEIHTIDKYQGRDKDCILVSFVRSSENPRNC------TSSLLG 1299
++ + VEI T D+ QGRDKD I+V+F R++ P + T LL
Sbjct: 1906 SLVATRASGAGRHALEDVEILTADQSQGRDKDVIIVTFTRANHGPSSTGARGGSTGELLN 1965
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
D R+NV+LTR K+KLI++G TL +L L++ V +Q I+N
Sbjct: 1966 DLRRLNVSLTRTKRKLILIGHSPTLHASSVLSPLLDLVKQQGWIIN 2011
>gi|363753828|ref|XP_003647130.1| hypothetical protein Ecym_5575 [Eremothecium cymbalariae DBVPG#7215]
gi|356890766|gb|AET40313.1| hypothetical protein Ecym_5575 [Eremothecium cymbalariae DBVPG#7215]
Length = 1497
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 330/1067 (30%), Positives = 540/1067 (50%), Gaps = 156/1067 (14%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI-G 428
+V+ E N P+ P KVL +N++ G + V L W PGD +++I G
Sbjct: 455 LVVISTKEFNLPSGP-----KQKVLTCINDK-GAKSNVILRAPWVQLSFEPGDVIHIIEG 508
Query: 429 E--------FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD-ERLKCSER 479
+ DD+ +N +IVHPD+LVS T + +S C R+SVL+ + ++
Sbjct: 509 KNCKNKRLLSDDKDPVTKLHNDNLMIVHPDLLVSATSMGSSIECLRKSVLNFQFMEPGVP 568
Query: 480 SISALLGTLLHQIFQAGLMKEIPTMK----FLEEYARLVLQKNIESLYACGVNENDIHKT 535
SI +G+++H++ Q L ++ K F+E ++ K+ S+ C E + +T
Sbjct: 569 SIQMTIGSIVHELLQELLEYKLKHPKIDDSFIESTLDEIISKHRLSILLCKETEEFVKET 628
Query: 536 LVEA-IPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMI 594
+ E + M +++ + + G +KL +S++ DIEE +P YG+KG I
Sbjct: 629 IRELHVDNMKQFVMEYVQVSNYQCRINVAGKVEHEKLSLSKIIDIEENILSPMYGMKGYI 688
Query: 595 DASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSG 654
DA++ I E +I PLE KTGK + H AQ +YT+L+++RY I+
Sbjct: 689 DATVETHI----GEGTKLIAPLEIKTGK----AKLISHEAQGTIYTMLLNDRYDVPIEFH 740
Query: 655 LLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA-------NDIIKASTTQ----QLPPMLR- 702
L+YY ++++ L L++ RN A N+I S + +LPP+L+
Sbjct: 741 LMYYSRTNEFMKQPRLLQSLKHLLVLRNRLAQHLKHNINEIQSCSEFEEMNIELPPLLQH 800
Query: 703 ------------------AYGGNKECSGLG----NMFDSHIYHLTTAHCSFLRHWDRLID 740
+ G+ E S L N SH+ + + + F + ++RL+
Sbjct: 801 STCDSCYHKRNCMVLNKISEDGSAEQSSLPEGEYNELTSHLENGLSLYQQFYKKFNRLLC 860
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDASNE-----HQKSYRDNRFVYHFVR 794
LE + + E++ G G CL +VLD+ ++ + K RDN
Sbjct: 861 LEESSLNSMTKEMFLMDGKSRELSNGRCLHGLVLDSISQVGGLYYCKLVRDN-------- 912
Query: 795 QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHV 854
I ++ + GD V +S E +++G + EIS+ ++
Sbjct: 913 -----------------AVEISMSMLNSQIAPGDMVYISDEVGHFCLSTGHVKEISKEYI 955
Query: 855 SVSFSKPLRLP---GRNSSSDADSLLHEV--------------------WRIDKDEIMTS 891
+++ + + G++ ++ ++ V +RIDK+++
Sbjct: 956 TITCRRRFDMDNVRGKDFNAYKKQVIESVLTQSGPSLIGVKNPMIRPLIYRIDKNDVHFG 1015
Query: 892 FSVMRYNLVQLFLQSAQ---------------------SSQLRRMIVDLEAPRFDSGSVF 930
S+ R+NL+ LFL + ++ RR++VD + PR F
Sbjct: 1016 LSMARFNLLNLFLPAVDPTVHYLDDKGEEVRLKRWQGGDTKTRRLLVDGKPPR------F 1069
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
S+ ++SY+ + N DQ +AI KV+ KDYALILGMPGTGKT+ + +K L G S
Sbjct: 1070 SKKSSISYVLDDNKFNRDQAKAIDKVMRCKDYALILGMPGTGKTTVVAELIKILTKNGKS 1129
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
+LL SYT+SAVDN+L+KL + +R+G +H +++ + +++ L++
Sbjct: 1130 VLLASYTHSAVDNILLKLLDAEVRMIRLGHIHKLHPKVRHLVPDFDKTETHDQLAFSLNE 1189
Query: 1051 VKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPP 1108
+VVA TCLGI +P+L +K FD I+DEA Q +LP++LGP+ F KF+LVGDHYQLPP
Sbjct: 1190 PQVVATTCLGINDPMLNLRNKDFDYVILDEASQVSLPIALGPIRFGEKFILVGDHYQLPP 1249
Query: 1109 LVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDE 1168
LV++ A+E G+E +LF+ L + HP +++ L QYRM IM LSN LIY +L CG+D
Sbjct: 1250 LVKNEIAKEKGLEETLFKTLCQRHPASVTELTIQYRMNTDIMALSNELIYNGKLKCGNDS 1309
Query: 1169 IANAKIKVS-DLSSCS--PWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLNNPVEACLI 1224
+AN + + D+++ S PWL++ L+P R V+ ++ +P E D + NP EA L+
Sbjct: 1310 VANQTLAIQMDIAAISNPPWLRDVLDPQRKVVLLDYGDIPDMQEMADKDNIRNPGEARLV 1369
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS----VEIHTIDKYQGRDKDCIL 1280
I + L+ + DIG++T Y SQ L+R L S +EI T D++QGRDK+CI+
Sbjct: 1370 KLIIEGLISLGVSTLDIGVMTLYRSQLRLLRSELLPHSNNNHLEILTADQFQGRDKECII 1429
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+S VRS N + LL + R+NVA++RAK KLI++ S RT+ V
Sbjct: 1430 ISMVRS--NDKQNAGLLLRELRRVNVAMSRAKSKLILICSKRTICNV 1474
>gi|255719266|ref|XP_002555913.1| KLTH0H00770p [Lachancea thermotolerans]
gi|238941879|emb|CAR30051.1| KLTH0H00770p [Lachancea thermotolerans CBS 6340]
Length = 1539
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 335/1051 (31%), Positives = 538/1051 (51%), Gaps = 136/1051 (12%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE--------FDDQGKC 436
V K KVL+ L+ + V + W GD V+ I F D
Sbjct: 455 VSNKGLQKVLKCLDHKGSVSNLV-VRSPWSRLTFKEGDVVHTISGSNTTNRRLFSDDRDP 513
Query: 437 DVGREN-NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQ 494
+ G+ N N LI++PD+L+S T V + C RR++L ++ E S+ AL+G ++H++ Q
Sbjct: 514 ETGKINDNLLILNPDILISATTVGRAVECERRALLSNQISGPGEPSLPALVGNIVHELVQ 573
Query: 495 AGLMKEIPTMKFLEE----YARLVLQKNIESLYACGVNENDI-HKTLVEAIPKMLNWIIL 549
L ++ + L+E + +L + + C ++ + + E IP + ++
Sbjct: 574 MCLKYKLDHVHILQERMSSFLDGILDNYVADIIMCQSTKDALLQQITAEHIPNIKQFLDA 633
Query: 550 F-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
F K + P+ ++ +++ IS + DIEE W+P YGLKG IDA++ + +
Sbjct: 634 FVKRDKSRTFPSARSFANK-QEMSISNIIDIEENIWSPMYGLKGFIDATVETTLPND--- 689
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ + PLE KTGK S+ H AQ +Y LL+S+RY ++ LL+Y +++
Sbjct: 690 -STFVAPLELKTGKF----KSISHEAQGTIYNLLLSDRYELPVNFFLLFYTKTNDFTKHD 744
Query: 669 VQRSDLVGLIMRRN---EFANDIIKASTTQQ-----LPPMLRAYG-----GNKECSGLGN 715
L LI+ RN E+ + T + LP +L + EC + N
Sbjct: 745 TLLHSLKHLIVLRNHISEYLRHELSEVTENKWQGTTLPSILGSAACDNCYSKTECMVINN 804
Query: 716 M---------------FDSHIYHLTTAHCSFLRHWDRLIDLEAKE---MQVVKNEIWCSR 757
+ +++ HLT+ ++ + R DL KE ++ + NEI+
Sbjct: 805 LCEDGSPKESGLKKGEYEALTGHLTSNRLNYKEFYMRYEDLIVKEESSLKGINNEIFLID 864
Query: 758 GSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
+G C+S++V+ AS + +S Y F R+ + +L SLI + +
Sbjct: 865 SKTRESLSGKCVSNLVIVASEDDSES---KLIRYTFCRKEGAAESL-----PSLINSQLS 916
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPG--RNS 869
DM VI+S E+ A+ +G + IS +++S S+ L R PG +
Sbjct: 917 KNDM---------VIISDEAGHFALCTGRVVSISTMEITISTSRRLQSNNVRAPGFEKGR 967
Query: 870 SSDADSLLHE-----------VWRIDKDEIMTSFSVMRYNLVQLFLQS------------ 906
+++L +RID++E+ ++ R+NL+ LFL S
Sbjct: 968 KQVLETVLMPSKSAKLGQKSITYRIDRNEVQQGLALARFNLLNLFLPSVPEGAVTTDPST 1027
Query: 907 ----------AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS-LNDDQRRAIIK 955
+ R ++VD PRF + S + P + Y KS N+DQ +A K
Sbjct: 1028 GQEIAFKRSWGGDQKTREIVVDGRTPRFVAPS---EPPRVPYDEGLKSRFNEDQWKAFEK 1084
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
V+ DYALILGMPGTGKT+ +V VK+L+ RG +ILLTSYT+SA+DN+LIKLK+ ID
Sbjct: 1085 VMRLDDYALILGMPGTGKTTLIVEIVKSLVARGKTILLTSYTHSAIDNILIKLKNCDIDI 1144
Query: 1016 VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDV 1073
R+G VH+E + ++ E+ K+++++ VVA TCL I + LL+ K FD
Sbjct: 1145 CRLGHKHRVHQEAWEFVPDFTEASTFEKFKEQVEKPSVVATTCLNIHDTLLSLRSKDFDY 1204
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
I+DEA Q +LP+ +GPL FA +FVLVGDHYQLPPLV++ AR G+++SLF+ L E+HP
Sbjct: 1205 VILDEASQLSLPICVGPLKFAERFVLVGDHYQLPPLVKNDAARVGGLDLSLFKMLCEKHP 1264
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC---------SP 1184
++ L QYRMC+ IM LSN LIY +L C S+E+ + K+++ ++
Sbjct: 1265 DSVVELTHQYRMCEDIMTLSNYLIYDGKLKCVSEEVRDQKLEIPHMAELDTMHVPGKHGQ 1324
Query: 1185 WLKEALNPCRPVIFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
WL LN + V+F++ D PA+ E + + NP EA L+ + +V+ + +DIG+
Sbjct: 1325 WLDIVLNSEKRVVFLDHDKCPAFQEIAEKDNIKNPGEAELVWQCVAAMVRCGVSRRDIGV 1384
Query: 1244 ITPYNSQANLIRHSLSV---SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+T Y +Q ++R + +EI T D++QGRDK C+++S VRS++ SLL +
Sbjct: 1385 MTLYRAQLRILRKMFEAEEHNELEILTADQFQGRDKRCVIISMVRSNDGLNG--GSLLRE 1442
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
R+NVA+TRAK KLI++GS T+S V L+
Sbjct: 1443 LRRVNVAMTRAKCKLIIIGSKATISSVESLR 1473
>gi|448117828|ref|XP_004203352.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|448120264|ref|XP_004203935.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|359384220|emb|CCE78924.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
gi|359384803|emb|CCE78338.1| Piso0_000959 [Millerozyma farinosa CBS 7064]
Length = 1491
Score = 471 bits (1212), Expect = e-129, Method: Compositional matrix adjust.
Identities = 315/977 (32%), Positives = 497/977 (50%), Gaps = 119/977 (12%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAG 496
V E+N LI +PDVL+S T V+ SCPR+SVL ER E SI ++G +LH++FQ
Sbjct: 510 VDDEHNLLIWNPDVLISSTTVSQQMSCPRKSVLQERFNFPGESSIPLIVGVVLHEVFQTC 569
Query: 497 LMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDL 556
M+E + F+ + +++CG ++ ++ + + NW L+ S
Sbjct: 570 FMEERYDLNFMISVVDNEIHHRRLEIFSCGDKIKEVKDQILPHLKYIDNWFKLYFTSNGE 629
Query: 557 NTPTVDFGSDGLKK-LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILP 615
G+ G + L DIEE W+P +GLKG +D S+ ++ SK + +LP
Sbjct: 630 KKGHETLGNRGTRSSLYARRALDIEENIWSPMFGLKGKVDVSLEGEVNSKTKQ-GTYLLP 688
Query: 616 LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLV 675
+E KTG+ + H AQ LY+LL +RY + LL Y + ++ + +DL
Sbjct: 689 MEIKTGR-----EYLGHHAQASLYSLLFKDRYNVDVSQFLLVYTKEMMSKLCDISPNDLR 743
Query: 676 GLIMRRNEFANDIIKASTTQQLPPMLRAYGGNK-----ECSGLGNM----------FDSH 720
L+ RN + + T+ LPP+++ ++ EC + + +
Sbjct: 744 SLVNLRNRVSKHL--RPYTRSLPPVIKQSQCDRCDLLNECMSIHTLVEDGFAEESGINEE 801
Query: 721 IYHLTTAHCS-------FLRHWDRLIDLEAKEMQVVKNEIWC------SRGSGGNHFTGC 767
Y L T+H F +WD LI E + +K ++W + SG F
Sbjct: 802 TYELITSHIEDNEDYKEFYNYWDNLITQEEGVLMSLKKDLWVLTAEEREKSSGRALFNMK 861
Query: 768 LSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
+ S SNE + + F+Y F R T DM +L++
Sbjct: 862 IRSF---DSNEAR-----SEFLYTFERS---------------------TSDMQMSLQNS 892
Query: 828 -----DYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRL---------PGRN----- 868
D +I+S E+ A+A G + I + ++ ++ + P N
Sbjct: 893 QISKFDRIIVSDENGHFALAQGYVIAIRPTFIKLALNRKVSCSTSQLKHFNPNNNQVFES 952
Query: 869 --SSSDADSLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD 925
S + S+ ++ +RIDKD++ + RYN++ LFL + + +R M+V+L+ P+F
Sbjct: 953 VLSPTQDKSIRKDISFRIDKDDMFHGMGLARYNILNLFLHTT-NPLMRNMLVELKEPKFS 1011
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S P + LN +Q+ AI K+L A YALILGMPGTGKT+ + + L+
Sbjct: 1012 PSKNTSCLPYM--------LNKEQKAAIEKILQAHHYALILGMPGTGKTTLIASLIDILI 1063
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS-AMNINSVEEI 1044
+G +ILL SYT+SAVDN+L+KL+ + +R+G VHK+I+K+ +I + ++
Sbjct: 1064 KQGKTILLASYTHSAVDNILLKLEDYTNSILRVGSFSRVHKDIKKYIPGWNTDIKTYQDF 1123
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDH 1103
+ + +VVA TCLGI + + FD CI+DEA Q ++P+SLGPL F KF+LVGDH
Sbjct: 1124 CEVYHKPQVVATTCLGINDITFNLRTHFDYCIIDEASQVSMPISLGPLRFCDKFILVGDH 1183
Query: 1104 YQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLPPLVQ+ + G+ SLF+ LSE HP++I L +QYRMC IM LSN L+Y RL
Sbjct: 1184 NQLPPLVQNPKPEIRKGLSRSLFKILSESHPESIIELSAQYRMCSDIMLLSNVLVYDGRL 1243
Query: 1163 SCGSDEIANAKIKV---------------SDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
CGS ++AN + + + +S WL E L V+F++ D +PA
Sbjct: 1244 KCGSADVANKSLMIPFRENVQNYINDEFEAQVSKNDLWLNEILEENHKVLFLDHDSVPAR 1303
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIH 1266
E + N EA LI +I + L+ ++ +G+++ Y SQ L+ L+ + VEI
Sbjct: 1304 ERVIGNKIENVTEAELIRQIVECLIACGVKESQVGVMSLYRSQLRLLHRKLTDRTDVEIL 1363
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T D++QGRDKDCI++S VRS N + LL +W R+NVA+TR+K KLI++GS TL
Sbjct: 1364 TADQFQGRDKDCIIISLVRS--NTQQKVGDLLKEWRRVNVAITRSKSKLIILGSKTTLDS 1421
Query: 1327 VPLLKLLINKVGEQSGI 1343
+ +L+ + + ++ I
Sbjct: 1422 LKMLEAFLGVIESRNWI 1438
>gi|254580319|ref|XP_002496145.1| ZYRO0C11528p [Zygosaccharomyces rouxii]
gi|238939036|emb|CAR27212.1| ZYRO0C11528p [Zygosaccharomyces rouxii]
Length = 1510
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 335/1037 (32%), Positives = 531/1037 (51%), Gaps = 131/1037 (12%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVI-GEFDDQGKC---DVG-----RENNFLIVHP 449
+ GE +V + W + + GD +++I G+ D + D+ R +N L+++P
Sbjct: 423 DHKGETSSVMVRHPWVYLEFSRGDAIHIIQGQNVDNKRLLSDDINPKTNVRNDNLLVLNP 482
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----T 503
D+L+S T V S C RRS ++ E IS +G ++H++ Q L ++ T
Sbjct: 483 DILLSATTVGNSIGCLRRSTIETIFDDPRGEPKISMTIGNIVHELLQDALRCKLENQKLT 542
Query: 504 MKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA-IPKMLNWIILFKDSQDLNTPTVD 562
+ +LEE +L+ +++ C + ++ + +L ++ F +L +
Sbjct: 543 VDYLEEVLDSLLKTYSFAIFVCNYTIEQVKDEIMNSHATNILQFVNQFVQKSNLGSYVSI 602
Query: 563 FGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGK 622
G + + I + DIEE + YGLKG +DA++ + E K++EI +PLE KTGK
Sbjct: 603 SGRRTTRPISIPVILDIEENILSHIYGLKGFLDATV-LAHEEKKHEI----VPLEVKTGK 657
Query: 623 IPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRN 682
+ S+ H AQ ++YTLL+ ++Y +D LL +++ + +IM RN
Sbjct: 658 L----GSVSHEAQGLIYTLLLKDKYEVPVDFFLLLQTRTNNFIKHPKILHSIKHVIMARN 713
Query: 683 EFANDI---IKASTTQQ-----LPPMLRA-------------------YGGNKECSGLG- 714
+ A + +K T + LPP+L++ G E SGL
Sbjct: 714 QLATKLKYRLKEITWDKSHDVILPPILQSSVCDNCFTKESCMVLNNLLEDGTAEESGLRP 773
Query: 715 NMFDSHIYHLTTAH---CSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSS 770
+++ HL+T H +F + ++ LI E + +K +++ + +G CLS+
Sbjct: 774 GEYETITSHLSTNHDKYGAFFKKYNDLITQEESSIMHIKKQLFLLDSNTKESTSGLCLSN 833
Query: 771 IVL-DASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDY 829
+ L D S E+ S F++ F R N +G P + L DY
Sbjct: 834 LCLVDISEENSTS---EEFLHVFKR--------NFQEGQK------PQSMLLSQLNVNDY 876
Query: 830 VILSTESDRLAVASGLITEISRFHVSVSFSKPLRLP---GRNSSSDADSLLHE------V 880
V +S E + G +T I+R +++ K LR P + S A E
Sbjct: 877 VFISDERGHFGLCQGRVTSITRGSITICSKKRLRNPEVVAKEILSAAKKQPIEGSQPLIT 936
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFL------------QSAQS----------SQLRRMIVD 918
+R+DK+ I S+ R+NL+ LFL Q+ Q ++R +VD
Sbjct: 937 YRLDKNVIEQGLSLTRFNLLNLFLPPVTEDHFVVDQQTGQERSIKKSEGGDQRMRTFLVD 996
Query: 919 LEAPRFDSGSVFSQDPALSYIWSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTM 977
P F + P + Y +E +S N DQR+A+ KV+ AKDYALILGMPG+GKT+ +
Sbjct: 997 KAPPEFIPDEL---PPLIPYDPNELESFNYDQRKAVGKVMRAKDYALILGMPGSGKTTVI 1053
Query: 978 VHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN 1037
+K L RG +LLTSYT+SAVDN+L+KLK I+ +R+G +H EI ++ S +
Sbjct: 1054 AQIIKILASRGQKVLLTSYTHSAVDNILLKLKGSPINIIRLGSARKIHPEIHEYQPSYQD 1113
Query: 1038 INSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
S E+I K++ +VVA TCLG+ + T K FD I+DEA Q ++PV+LGPL +AS
Sbjct: 1114 AESYEDIMKQISDTQVVATTCLGLNDIFFTLQQKDFDYAILDEASQISMPVALGPLRYAS 1173
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
KF++VGDHYQLPPLV++ EAR G++ SLF+ L E P+A+ L QYRMC + LSN
Sbjct: 1174 KFIMVGDHYQLPPLVRNEEARLGGLQESLFKILCEAQPKAVIELTYQYRMCDDVAALSNF 1233
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCS-----------PWLKEALNPCRPVIFVNTDML 1204
LIY ++L CG++++A KI + L WL E L P + VIF+N D+
Sbjct: 1234 LIYSNKLKCGNEQVAKKKINLPRLKELENFHCPQELHEKDWLCEILEPHKKVIFLNYDLC 1293
Query: 1205 PA---YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-- 1259
E + +T+ NP E + + L+ ++ +DIG++T Y +Q L+ +
Sbjct: 1294 EEEQLIEINEQKTITNPGEVDIAEQCVNGLIHAGMDCRDIGVMTLYRAQLQLLNKRFASD 1353
Query: 1260 -VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
S++EI T D++QGRDK+ I++S VRS N + SLL + R+NVA+TRAK KLI++
Sbjct: 1354 HYSNLEILTADQFQGRDKESIIISLVRS--NVEHNAGSLLRELRRVNVAMTRAKSKLIII 1411
Query: 1319 GSCRTLSKVPLLKLLIN 1335
GS T+S VP + L+N
Sbjct: 1412 GSRATISSVPQMARLVN 1428
>gi|349578716|dbj|GAA23881.1| K7_Dna2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1522
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 325/1048 (31%), Positives = 537/1048 (51%), Gaps = 137/1048 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEVGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQRLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEMVEHEKT--EGAYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSSLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S S+ R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F + DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAN---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ +I +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPETLSQYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
>gi|6321958|ref|NP_012034.1| Dna2p [Saccharomyces cerevisiae S288c]
gi|731738|sp|P38859.1|DNA2_YEAST RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
Includes: RecName: Full=DNA replication nuclease DNA2;
Includes: RecName: Full=DNA replication ATP-dependent
helicase DNA2
gi|458906|gb|AAB68010.1| Dna2p: DNA replication helicase [Saccharomyces cerevisiae]
gi|256273969|gb|EEU08887.1| Dna2p [Saccharomyces cerevisiae JAY291]
gi|285810070|tpg|DAA06857.1| TPA: Dna2p [Saccharomyces cerevisiae S288c]
gi|392298975|gb|EIW10070.1| Dna2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1522
Score = 471 bits (1211), Expect = e-129, Method: Compositional matrix adjust.
Identities = 325/1048 (31%), Positives = 537/1048 (51%), Gaps = 137/1048 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEVGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQKLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEVVEHEKT--EGAYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSSLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S S+ R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F + DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAN---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ +I +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
>gi|190405942|gb|EDV09209.1| DNA replication helicase [Saccharomyces cerevisiae RM11-1a]
Length = 1522
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 326/1048 (31%), Positives = 535/1048 (51%), Gaps = 137/1048 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEAGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQKLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEVVEHEKT--EGAYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSNLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S S+ R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAI---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ SI +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTSISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP+ ++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPENVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSQYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
>gi|151944110|gb|EDN62403.1| DNA helicase [Saccharomyces cerevisiae YJM789]
Length = 1522
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 326/1048 (31%), Positives = 536/1048 (51%), Gaps = 137/1048 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEVGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQKLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEVVEHEKT--EGTYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSNLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S S+ R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAI---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ +I +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++I+ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESIAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSQYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
>gi|444725172|gb|ELW65750.1| DNA2-like helicase [Tupaia chinensis]
Length = 1693
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 331/947 (34%), Positives = 483/947 (51%), Gaps = 131/947 (13%)
Query: 412 DWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
DW + PGD +++ G + +LI++PD+L+SGT +A+S C RR+VL
Sbjct: 118 DWCSIPVEPGDIIHLEGT-STPNTWIIDENFGYLILYPDMLISGTSIASSIRCMRRAVLS 176
Query: 472 ERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVN 528
E K S+ + L+GT+LH++FQ + K L+E A LQ ++++ +Y ++
Sbjct: 177 ETFKSSDPATRQMLIGTVLHEVFQKAINDSFAPEK-LQELAFQTLQEIRHLKEMYRLNLS 235
Query: 529 ENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKK-----LKISEVTDIE 580
+ +I + + E +P W F S D + SDG K +++ DIE
Sbjct: 236 QEEIKQEVEEYLPSFSKWAGDFMHRNTSGDFPQMQLSLPSDGSKNNSACNIEVINSLDIE 295
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ---VI 637
E W+P++GLKG ID ++ VKI + N+ I+PLE KTGK N S+EHR+Q +
Sbjct: 296 ESIWSPRFGLKGKIDVTVGVKIH-RGNKTKYKIMPLELKTGKESN---SIEHRSQPANAM 351
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQL 697
YT H+ G ++ Q V D++ L
Sbjct: 352 FYT---------HLIRGFVFRAVEQQMDDTSVP----------------DVM-------L 379
Query: 698 PPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWC 755
P M HL H + W ++ LE++ +N IW
Sbjct: 380 PKM-----------------KEETQHLKLTHLEYFSLWCLMLTLESQSKGNRRNYQNIWL 422
Query: 756 SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAI 815
S C+ +++ H + D ++++HF R++ G
Sbjct: 423 MPASEMEDSGNCIGNLIRTG---HVTTVCDGQYLHHFQRKN---------------GTIS 464
Query: 816 PTKDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
T L +GD +ILS E L A++ G + E++ V+ L RN S +
Sbjct: 465 IT-----NLMAGDRIILSGEERTLFALSRGYVKEVTMTTVAC-------LLDRNLSVLPE 512
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQ 932
S L +R+D++E NL +L ++ S +LR +I+DL P+F S SV
Sbjct: 513 STL---FRLDQEEKNCDIDTPLGNLSKLMENTSTSKKLRDLIIDLREPQFISYLSSVLPY 569
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
+ + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+L
Sbjct: 570 NAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVL 629
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQ-----KHCLSAMNINSVEEIKKR 1047
LTSYT+SAVDN+L+KL I F+R+G+ + VH IQ K C S +I S+ +++
Sbjct: 630 LTSYTHSAVDNILLKLAKFKIGFLRLGQTQKVHPGIQEFTEEKICRSK-SIKSLALLEEL 688
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+ +VA TC+GI +P+ + + FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLP
Sbjct: 689 YNSQLIVATTCMGINHPIFSRRIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLP 748
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
PLV + EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD
Sbjct: 749 PLVLNREARALGMSESLFKRL-EQNTNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSD 807
Query: 1168 EIANAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
++ANA I + + S +PWL P PV F+NTD +PA E + +
Sbjct: 808 KVANAMINLPNFKDVKLELEFYADYSDNPWLVGVFEPNNPVCFLNTDKVPAPEQVEKGGV 867
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQ 1272
+N EA LI +T +K DIGII PY Q +I + SV +VE++T+DKYQ
Sbjct: 868 SNITEAKLIVFLTSVFIKAGCSPSDIGIIAPYRQQLKIISDLMAQSSVGTVEVNTVDKYQ 927
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
GRDK ILVSFVRS N LL DW R+NVA+TRAK KLI++G
Sbjct: 928 GRDKSIILVSFVRS--NKDGTLGELLKDWRRLNVAITRAKHKLILLG 972
>gi|259146921|emb|CAY80177.1| Dna2p [Saccharomyces cerevisiae EC1118]
Length = 1522
Score = 468 bits (1204), Expect = e-128, Method: Compositional matrix adjust.
Identities = 324/1048 (30%), Positives = 535/1048 (51%), Gaps = 137/1048 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEAGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQKLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEVVEHEKT--EGAYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSNLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S + R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLYLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAI---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ +I +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTNISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSQYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK KL
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSKL 1436
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
I++GS T+ VP +K +N + E++ +
Sbjct: 1437 IIIGSKSTIGSVPEIKSFVNLLEERNWV 1464
>gi|429241027|ref|NP_596499.2| DNA replication endonuclease-helicase Dna2 [Schizosaccharomyces pombe
972h-]
gi|408360057|sp|Q9URU2.2|DNA2_SCHPO RecName: Full=DNA replication ATP-dependent helicase/nuclease dna2;
Includes: RecName: Full=DNA replication nuclease dna2;
Includes: RecName: Full=DNA replication ATP-dependent
helicase dna2
gi|5052396|gb|AAD38528.1|AF144384_1 Dna2p [Schizosaccharomyces pombe]
gi|347834381|emb|CAB38508.2| DNA replication endonuclease-helicase Dna2 [Schizosaccharomyces
pombe]
Length = 1397
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 331/1000 (33%), Positives = 509/1000 (50%), Gaps = 100/1000 (10%)
Query: 391 YKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
++ L+L+ E + + L DW T I GD++ V FD V + +I+HP
Sbjct: 377 FRQLKLILEANDILHQLFLRGDWTETSIFVGDSIRVEATFDKDNTAIVDNDKGLIIIHPK 436
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEE 509
+L+S T VA+SF C R++V+ +R+ A++ G +LH FQ L + I ++ ++
Sbjct: 437 ILMSATAVASSFPCLRKAVISDRVGIYGPPTKAMVTGNILHDFFQHALYRGIDALENVDI 496
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII---LFKDSQDLNTPTVDFGSD 566
++ I +Y ++ ++I + L +P +L I+ L D N ++
Sbjct: 497 NLETSIKTYISDIYFADLSLDEIREELDARLP-LLKSIVERYLISKKNDNNNESI----- 550
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
IS + DIEE W+P++GLKG IDA++ V + K + + LPLE KTG+ +
Sbjct: 551 -----HISRLLDIEESIWSPRFGLKGNIDATVEVVLTEKPESSSTLTLPLELKTGRYVD- 604
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
++ H AQ +LYTLL+S+RY + + LL YL++ + ++ S L GLIM RN A
Sbjct: 605 --NISHFAQSLLYTLLISDRYGINTNQALLCYLENSTIKNLVASNSQLRGLIMTRNSLAQ 662
Query: 687 DIIKASTTQQLPPMLRAYGGNKECS--------------------GLGNMFDSHIYHLTT 726
+ S LP M+ CS GL ++ + +
Sbjct: 663 HNFRRS----LPEMISNRKICDHCSLVSECLFFQKMSDKGVANSNGLTESWNEWMREVKD 718
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDN 786
F + W++L++ E + + + + ++ + L + + + D
Sbjct: 719 EDLEFYKKWEKLLNQEERLLLLKRGDVLTFDTEELEAYGKTLYPLYITKEDIVCLEIDDR 778
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
F Y F L P + G+ V +S E ++A G I
Sbjct: 779 VFHYKFA---------------FLNDNGYPRNFLHSGFSVGERVFISDEHGHWSLAKGHI 823
Query: 847 TEISRFHVSVSFSKPLRLP---------GRNS---SSDADSLL------HEVWRIDKDEI 888
I + V L +P +N + DS L H +RIDKDE
Sbjct: 824 VHIQDSCIEVRTRHRLHIPWLKMPNFDFKKNQVFFGNYEDSKLSFIGSNHTRYRIDKDEF 883
Query: 889 MTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDD 948
+ + +R L+ L A +R MI+ L+ P+F + ++ DP K LN+D
Sbjct: 884 SSGIASIRGTLMSSVLPDA-PLIIRDMIIRLKPPKFCNSALI--DPEFL-----KCLNED 935
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
Q A+ K A+ Y+LILGMPGTGKT+T+ +++LL + ILLTS+T+ AVDN+LIKL
Sbjct: 936 QITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSLLAKKKKILLTSFTHLAVDNILIKL 995
Query: 1009 KSQSIDFVRIGRHEVVHKEIQKHCLS-AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
K VR+G +H +++ CL+ + + +K + ++VA + LG+ + +
Sbjct: 996 KGCDSTIVRLGSPHKIHPLVKEFCLTEGTTFDDLASLKHFYEDPQIVACSSLGVYHSIFN 1055
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+KFD CI+DEA Q LP+ LGPL A KFVLVGDHYQLPPLV+++ ++G+ +SLF+
Sbjct: 1056 KRKFDYCIIDEASQIPLPICLGPLQLAEKFVLVGDHYQLPPLVKNSRTSKDGLSLSLFKL 1115
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI---------KVSD 1178
LSE+HP+A++ L+ QYRM + I LS+ LIYG L CGS I+ K+ + D
Sbjct: 1116 LSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPD 1175
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
SS W+ + +NP VIF NTD + E+K + L N EA LI + ++ ++
Sbjct: 1176 SSSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQ 1235
Query: 1239 KDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
IGII+ Y SQ L+ +L S + +EI+T+D+YQGRDKD IL+SFVRS N +N L
Sbjct: 1236 SSIGIISIYKSQVELLSKNLKSFTEIEINTVDRYQGRDKDIILISFVRS--NSKNLVGEL 1293
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVP----LLKLL 1333
L DWHR+NVAL+RAK K IM GS TLS LLKLL
Sbjct: 1294 LRDWHRLNVALSRAKVKCIMFGSLSTLSSSNIVSHLLKLL 1333
>gi|410079859|ref|XP_003957510.1| hypothetical protein KAFR_0E02220 [Kazachstania africana CBS 2517]
gi|372464096|emb|CCF58375.1| hypothetical protein KAFR_0E02220 [Kazachstania africana CBS 2517]
Length = 1520
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 332/1062 (31%), Positives = 534/1062 (50%), Gaps = 146/1062 (13%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE---------N 442
K+L ++E G++ +V L W + GD ++++ D K + + +
Sbjct: 443 KILTCIDEY-GKKSSVILRNPWVYLDFDEGDIIHIVEGKDASNKRLLSDDRDPTTNRVND 501
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKE 500
N L+++PD+LVS T V S C R SVLD + E S+ +G ++H++ Q+ L
Sbjct: 502 NLLVLNPDILVSATTVGKSVQCMRSSVLDNFFQDPRGEPSLPMTIGNIVHELLQSALKYR 561
Query: 501 IPTMKFLEEYARLVLQKNIESL-YACGVNENDIHKTLVEAIPKMLNWIILF-----KDSQ 554
EY L +E+ +A V + I + E + ++ I+ F K+
Sbjct: 562 CSNTSITLEYLSECLDSLLEAYSFAIIVCDKTIEEVREEILNTHVHNILKFLHDNVKEDN 621
Query: 555 DLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL 614
N + G+ + + IS V DIEE W+P YGLKG +DA++ +++K+ I+
Sbjct: 622 YGNYVLIS-GARTTEPISISNVIDIEENIWSPVYGLKGFLDATVEAHVKNKK-----YIV 675
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
P+E KTGK S+ + Q ++YTLL+++RY +D L+YY + Q + +
Sbjct: 676 PMEVKTGK----SRSISYEVQGLIYTLLLNDRYEMPVDFFLMYYTRDTQMTKFPRILNSI 731
Query: 675 VGLIMRRNEFANDI--------IKASTTQQLPPMLR-AY------------------GGN 707
L+M RN+ I K QLPP+LR +Y GG
Sbjct: 732 KHLLMARNKLVTSIKHRIGVVATKERINFQLPPLLRDSYCDICVSKPTCMVLNKLIDGGE 791
Query: 708 KECSGLG----NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNH 763
SG+ N H+ + F + LI E + + EI+
Sbjct: 792 AGSSGISEEEFNTLTDHLGPNLGRYKEFFLKCNDLISKEESSLTSINQEIFMVDPKTRES 851
Query: 764 FTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDC 822
G C+S +++D+ + +KS + Y FVR+ + N+ S++ + I DM
Sbjct: 852 LNGRCISGLMIDSIKKDRKS---QLYFYKFVRKGVEDENI------SMLNSQINNHDM-- 900
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL---RL--------------- 864
+I+S ES A+ G +I++ +++S + L +L
Sbjct: 901 -------IIVSDESGHFALCQGNAVDITKNSITISTRRKLLNNKLTNYMTEQTSIKSMFD 953
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSS-------------- 910
P + S+ +RIDK++I + S R+N++ LFL S +S
Sbjct: 954 PSIDESTTIQGQNSVTFRIDKNDIHQNLSNARFNILNLFLPSIKSGDFATERETTGEIRC 1013
Query: 911 ---------QLRRMIVDLEAPRFDSGSVFSQDPALSYIWS--EKSLNDDQRRAIIKVLTA 959
++R++++D E P+F + A+ ++W LN DQ++AI KVL A
Sbjct: 1014 LKKSEGGDERMRKLLIDNEPPKF-----IPNNEAIPFVWDADRTDLNVDQKQAIDKVLRA 1068
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
+DYALILGMPGTGKT+ + +K L+ ILLTSYT+SAVDN+L+KL +I VR+G
Sbjct: 1069 QDYALILGMPGTGKTTVIAEIIKILVSNNKKILLTSYTHSAVDNILLKLLDSNISIVRLG 1128
Query: 1020 RHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK--FDVCIMD 1077
+H + Q +++ S + K ++ + VVA TCLGI + L + ++ FD I+D
Sbjct: 1129 SRRNIHPKAQHLIPDYVSLESHKTFLKLINNMSVVATTCLGIKDILFSMRQEDFDYVILD 1188
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHPQAI 1136
EA Q ++P++LGP+ FA KF+LVGDHYQLPPL+++ A+ + G+E SLF+ L E P+++
Sbjct: 1189 EASQVSMPIALGPIRFAEKFILVGDHYQLPPLIKNAYAKIDGGLENSLFKTLCENRPESM 1248
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC---------SPWLK 1187
L QYRMC I++LSN LIY D+L CG+D + N ++K DL WL
Sbjct: 1249 VELTYQYRMCGDIVKLSNFLIYNDKLKCGNDAVKNQRLKFEDLERVRRYHHLLNFDGWLY 1308
Query: 1188 EALNPCRPVIFVNTDM--LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L+P R V+F+N D E +++ + N E +I + + + + I ++IG++T
Sbjct: 1309 NILDPNRKVMFLNYDTNNPDIVERIENENITNIGEIEIIKQCVEGMRVSGINCENIGVMT 1368
Query: 1246 PYNSQANLI----RHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Y +Q L+ R+ S +EI T D++QGRDKDCI++S VR + + RN SLL +
Sbjct: 1369 LYRAQLRLLKKEFRNKEKFSDLEILTADQFQGRDKDCIIISMVRCNSD-RN-GGSLLREL 1426
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
R+NVA+TRAK KLI+VGS +T+ V + IN +G I
Sbjct: 1427 RRVNVAMTRAKSKLIIVGSKKTIGSVKEINSFINMLGANGWI 1468
>gi|343425911|emb|CBQ69444.1| related to DNA2-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1427
Score = 464 bits (1195), Expect = e-127, Method: Compositional matrix adjust.
Identities = 341/1096 (31%), Positives = 513/1096 (46%), Gaps = 229/1096 (20%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLM-- 498
+N +VHPDVLV T+VA SC R+ V+ +RL+ S+ ++S ++G +LH++FQA L
Sbjct: 348 DNLFVVHPDVLVPATKVADVASCIRKPVVQDRLRGASDVTLSLVMGNMLHELFQACLTAS 407
Query: 499 ----------------KEIP--------------TMKFLEEYARLVLQKNIESLYACGVN 528
+P + F+E+ ++ NIESLYA ++
Sbjct: 408 PSEQGSDDDKPQAATDSSVPPSPWPELWQGIGNFSRSFVEKQVEHQVRSNIESLYAIDLS 467
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLNT--PTVDFGSDG------LKKLKISEVTDIE 580
+D L + ++ F +D P G K+++ + D+E
Sbjct: 468 ADDATIQLRDKAAPFAHFARTFLLQEDDTAFHPEATLRESGRPSAASASKVRLRRILDVE 527
Query: 581 EMAWAPKYGLKGMIDASIRVKI-------------------------------ESKRNEI 609
E W+P YGLKG +D S+ I E +
Sbjct: 528 EEIWSPVYGLKGKVDVSVECDILEAPESPAPKSTAAQQSRQAFSRGDHGATSDEQSDRRV 587
Query: 610 NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMV 669
++PLE KTG+ S EHRAQ +LYTL+MS+RY + GLLYY +S + +
Sbjct: 588 TTSVVPLELKTGRAE--VVSTEHRAQTMLYTLMMSDRYGVRVSDGLLYYSKSGELHRISR 645
Query: 670 QRSDLVGLIMRRNEFANDIIKASTTQQ--------------LPPML-------RAY---- 704
R+++ LI+ RNE A+ + ++ + LPP + R Y
Sbjct: 646 SRNEVRSLIIGRNELAHYLRHDASRLRKPKVEEAEEEAAPVLPPTIDSEHKCRRCYAVDG 705
Query: 705 -----------------------GGNKECSG--------LGNMFDSHIYHLTTAHCSFLR 733
GG +G + ++F+ HLT H F R
Sbjct: 706 CMLFRRAVENVVEPSEANVGDIGGGGASRTGKVLARRTPIADVFEQKTDHLTDVHLDFFR 765
Query: 734 HWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD-----ASNEHQKSYRDNRF 788
WDRL++LE ++ ++ E+W C ++ LD S S R R
Sbjct: 766 KWDRLLNLEEEDAVRIRREMWTMTAEQREKVGRCFGNMRLDLAPGTCSPAASNSMR--RV 823
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG-----DYVILSTESDRLAVAS 843
V+ FVR +L+A+ G + L SG D V +S E D L+VA
Sbjct: 824 VHRFVR------HLDATQG------------AEAGLLSGHITVNDPVTISIEPDMLSVAQ 865
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNS---------------SSDADSLLHEVWRIDKDEI 888
G + ++ V + L R + ++ A+ L V+RIDKDE+
Sbjct: 866 GFVANLTPTSVEIGLDHSLEAAMRRALVKSHPGTLDELFDVAAAAERL---VFRIDKDEL 922
Query: 889 MTSFSVMRYNLVQLFLQSAQSSQLRR--MIVDLEAPRF----------DSGS-VFSQDPA 935
+ +R NL LF+ + ++R ++V++ APRF +GS S
Sbjct: 923 GSGMGRIRANLAALFMTPQRGGDVKRRELVVEMRAPRFLHPEQLHESFQAGSGCASVQKV 982
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
+ ++ SLNDDQ+ AI KVLTA+DYAL+LGMPGTGKT+T+ ++ L+ G ILLTS
Sbjct: 983 IDEARADASLNDDQKVAIDKVLTAQDYALVLGMPGTGKTTTIAKLIELLVKLGKRILLTS 1042
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---GRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVK 1052
YT+SAVD +L KL D +RI G + VH + + L S++E++ +
Sbjct: 1043 YTHSAVDTILRKLGEDDKDGLRILRLGSKDKVHADAHRFLLP--RCTSLDELRDAFETPN 1100
Query: 1053 VVAVTCLGITNPLLTDKK---------------FDVCIMDEAGQTTLPVSLGPLMFASKF 1097
VVA TCL + + + FD CI+DEA Q LP LGPL FA +F
Sbjct: 1101 VVAATCLSVHHTFFSSGVAKLRSRTQDAAPAYLFDYCIVDEASQIPLPTCLGPLRFADRF 1160
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNAL 1156
VLVGDH+QLPPLV++ EA+ G+++SLF+ LS+ H A+ AL++QYRM IM LSN L
Sbjct: 1161 VLVGDHHQLPPLVKNAEAKAGGLDVSLFKLLSDRHGAGAMVALRAQYRMNDDIMRLSNHL 1220
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSC-----SPWLKEALNPCRPVIFVNTD---MLPAYE 1208
+YG +L GS+++A + + L + W+K L P V ++T + E
Sbjct: 1221 VYGGQLRAGSEDVAARTLLLPRLDAVHFGEEDRWMKALLQPDTKVRMLDTSRRALSEVGE 1280
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR---HSLSVSSVEI 1265
+K + + N EA L+ +I L+ I ++TPY Q L+R H+ + VE+
Sbjct: 1281 SKHGELVKNAFEAHLVVRIVAALLAAGCTAGQIAVVTPYRQQLKLVRSLMHAGEMDQVEL 1340
Query: 1266 HTIDKYQGRDKDCILVSFVR------SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
T D+ QGRDKD I+V+F R S+E T LL D R+NVALTRAK+KL++VG
Sbjct: 1341 LTADQSQGRDKDVIVVTFTRANVDAASTECAGASTGELLNDVRRLNVALTRAKRKLVLVG 1400
Query: 1320 SCRTLSKVPLLKLLIN 1335
TL +LK L+
Sbjct: 1401 HAATLEGSAVLKPLLG 1416
>gi|241956218|ref|XP_002420829.1| DNA replication ATP-dependent helicase, putative [Candida
dubliniensis CD36]
gi|223644172|emb|CAX40981.1| DNA replication ATP-dependent helicase, putative [Candida
dubliniensis CD36]
Length = 1420
Score = 464 bits (1195), Expect = e-127, Method: Compositional matrix adjust.
Identities = 321/999 (32%), Positives = 513/999 (51%), Gaps = 119/999 (11%)
Query: 412 DWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
D+ + GD ++VI D + +N LI +PD+L+S T +A +C R++V+
Sbjct: 411 DYCELELEKGDVIHVIVT-DSSNPRLIDDMHNLLIWNPDILLSATTIAQQLNCSRKTVIL 469
Query: 472 ERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNEN 530
R K + ++ + G ++H IFQ + E +F+ + +L + + ++
Sbjct: 470 SRYKFPATSTLPIIAGEIVHFIFQECICTEKWDTEFMNQVLDELLSQYMLLIFGIQKEVK 529
Query: 531 DIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD-GLKKLKISEVTDIEEMAWAPKYG 589
++ + +V+ + W + +D S+ + E DIEE +P +G
Sbjct: 530 EVREEVVKHFDYLQTWFNTYYKQPLSRKNLIDETSERDPIMFAVEEALDIEEEIRSPIFG 589
Query: 590 LKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLK 649
+KG IDA+I K E+K+ + MI P+E KTG+ + HRAQ LY+LL +RY
Sbjct: 590 IKGKIDATITAKFENKKMKGQFMI-PMEIKTGR-----EYIYHRAQASLYSLLFKDRYDM 643
Query: 650 HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR------- 702
IDS LL Y + TQ ++ SDL L+ RN+ ++ I +LPP+++
Sbjct: 644 TIDSFLLVYTKEKLTQKCNIRISDLRSLVNLRNKVSHYI---KNNLKLPPLVKNSNCERC 700
Query: 703 ------------AYGGNKECSGLG---------NMFDSHIYHLTTAHCSFLRHWDRLIDL 741
G KE SG+ ++F++ +Y ++ +HWD LI
Sbjct: 701 EIRSACMTLNHLTENGTKEESGIEEDLYEAITRDIFENDLYR------NYFQHWDELISK 754
Query: 742 EAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNE-----------HQKSYRDNRFVY 790
E ++W C S + + SNE H ++ +F+Y
Sbjct: 755 EEDISSRAVKDLWTIPAEEKEFQGKCFSDMRITNSNEKESNNFLFSSTHHDKSQNQQFMY 814
Query: 791 HFVRQHMPSP-NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
F + S NL SLI D VI+S E A+ +GL+ +I
Sbjct: 815 TFAKAENASKFNL----ARSLINV-------------NDKVIISDEEGHFALTTGLVKQI 857
Query: 850 SRFHVSVSFSKPL-----RLPG-------------RNSSSDADSLLHEVWRIDKDEIMTS 891
++ V +S + + +L R++ + + + + +RIDKD +
Sbjct: 858 TKDFVVISTRRKIITSDYKLKNYNRANNQVFQSVIRSTQQNTQTTIEKKFRIDKDGMFYG 917
Query: 892 FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRR 951
+ RYN++ LFL +S+LR+++VDLE P F + S D +EK N DQ
Sbjct: 918 LGLARYNVLSLFLPGG-ASKLRKLVVDLEKPTFGTSSWEIPD-------AEK-FNPDQIA 968
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ K +A DY+LI+GMPGTGKT+ + +K L+ + S+LLTSYTNSAVDN+L+KLK
Sbjct: 969 ALNKAFSANDYSLIVGMPGTGKTTVIAQLIKVLVSQKKSVLLTSYTNSAVDNILLKLKEL 1028
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
IDF+R+G + VHK+I+ + + I + E+ + KV+A TCL IT+ ++
Sbjct: 1029 DIDFLRLGYPQRVHKDIKDYIPGFKDSITTYEQYVNTYMRPKVIATTCLNITDTCFNLRR 1088
Query: 1071 -FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRL 1128
FD CI+DEA Q TLPV+LGPL FA KFV+VGDH QLPPLV + R + + SLF L
Sbjct: 1089 TFDYCIVDEASQITLPVNLGPLGFADKFVMVGDHDQLPPLVTHPDKRVKQELSRSLFSLL 1148
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-----------S 1177
++EHP +IS L QYRM IM + N LIY ++L CGS+++A +K+
Sbjct: 1149 AKEHPDSISYLTYQYRMNNDIMNVCNTLIYNNKLKCGSEKVAQQSLKIPNSEVLNSFLTE 1208
Query: 1178 DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
D+ S S W+ + + V+F++ D +PA E + + N EA LI ++ LV ++
Sbjct: 1209 DVPSDSQWIHKVFDEKNKVLFLDYDAVPAVEETVGEMITNTREALLIQQLVNALVLGGVK 1268
Query: 1238 GKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
IG+++ Y +Q ++++ +L ++ +EI T D+YQGRDK+CI++S VRS+E R +
Sbjct: 1269 EDQIGVMSFYRAQLSVLKKNLCNLKDLEILTADQYQGRDKECIIISLVRSNE--RKFAGN 1326
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L+ ++ R+NVA TRAK KLI++GS TLS L ++
Sbjct: 1327 LMTEYRRLNVAATRAKSKLIILGSRFTLSTNELTNTFVD 1365
>gi|47218708|emb|CAG05680.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1043
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 351/1035 (33%), Positives = 519/1035 (50%), Gaps = 152/1035 (14%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L + W T + GD V++ G+ D V RE FL++ PD L+SGT +++S C RR+
Sbjct: 40 LRDGWEMTPVCRGDVVHLEGQ-RDGASWLVDREKGFLVLQPDSLISGTSISSSIRCMRRA 98
Query: 469 VLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E K + S +L GT++H +FQ + + L A L + + +Y
Sbjct: 99 VLGEMFKSFDGSSKQMLNGTMVHDVFQKAATAKDFSSVTLSRLADQALHSPQYLPDMYRL 158
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF-----KDSQDLNTPTVDFGSDGLKKLKISEVTDIE 580
GV++ ++ + L + +P + +W + + L+ D L I+E+ DIE
Sbjct: 159 GVSQEEMKQELHDYMPSLEHWAKEYLSPSSPKAVRLSIRAPGQCQDAAALLTITELVDIE 218
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRN-EING----MILPLEFKTGKIPNGQSSMEHRAQ 635
E W+P++GLKG ID + RV+I RN + +G +PLE KTG+ N S+EHR+Q
Sbjct: 219 ENVWSPRFGLKGKIDVTARVRIHRPRNGQHHGSQEERTIPLELKTGRESN---SIEHRSQ 275
Query: 636 VILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN--------- 686
VILYTL+ ERY D+G L YL++ V+ D L+ RN +
Sbjct: 276 VILYTLMSLERYSP--DAGFLLYLKTGNLHPVVASHMDRRELLKLRNTLVHHLHNCVERR 333
Query: 687 ----------DIIKASTTQQLPPM-------LRAYGGNKE--CSGL-GNMFDSHIYHLTT 726
DI+ T Q P RA G G+ G++ HLT
Sbjct: 334 GEKSRLAPLPDILSNRQTCQYCPQSRNCALYQRALDGTSAGVSEGVAGDLLQQETGHLTP 393
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
H + HW L LEA M+ ++ IW C+ ++ + Q
Sbjct: 394 PHLRYFSHWVLLCCLEAATMETKNSQKNIWLQSPEESEKNGSCVGNLAISGPVTAQA--- 450
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR-LAVAS 843
+ F++ F R P P + L SGD +++ + R + +A+
Sbjct: 451 EGAFLHRFQRSR-PEPRAGSHSSG---------------LASGDRIVVGDQEGRFVGLAT 494
Query: 844 GLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + E++R VS + + L + PG ++R+D E S NL +L
Sbjct: 495 GHLREVNRTSVSCTLDRDLSKFPGL------------LFRLDGHEGAVGLSTHLTNLSRL 542
Query: 903 FLQSAQ---------------------SSQLRRMIVDLEAPRFDSG--SVFSQD------ 933
++S+Q S +LR ++VDL P F S SV ++
Sbjct: 543 -MESSQGRSTCPFSALLSVFLDNVGRVSDRLRELVVDLRPPEFISSLSSVLPKEAKDAVA 601
Query: 934 --------------------PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGK 973
PA LN Q++A+ KVL +KDY LI+GMPGTGK
Sbjct: 602 NILKGWYPAPPHCRHGGRRPPAHLVHVGGAGLNKPQKQAMKKVLLSKDYTLIVGMPGTGK 661
Query: 974 TSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
T+T+ V+ L G S+LLTSYT+SAVDN+L+KLK + F+R+G+ + VH +I +
Sbjct: 662 TTTICTLVRILHACGFSVLLTSYTHSAVDNILLKLKRFRVGFLRLGQGQKVHPDILPYTE 721
Query: 1034 SAM---NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ ++++ E+++ ++ VV TCLGI +PL T ++FD CI+DEA Q + PV +GP
Sbjct: 722 ESARKKGVHTLSELEQLYNKELVVGTTCLGIRHPLFTRRRFDFCIVDEASQISQPVCVGP 781
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
L +A +FVLVGDH QLPP+VQ+ EAR GM+ SLF+RL E H A+ L QYRM + IM
Sbjct: 782 LFYARRFVLVGDHQQLPPIVQNQEARSLGMDESLFKRL-ELHRDAVVQLNVQYRMNRQIM 840
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP------WLKEALNPCRPVIFVNTDML 1204
LSN+L+Y RL CGS+ A + I + L S P W++ L P PV F++ +
Sbjct: 841 SLSNSLMYEGRLECGSERTATSLITLPLLPSVLPELGSLAWIQATLLPSNPVCFLDCSAV 900
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS-- 1262
PA E + ++N EA LI K+ L+K + DIG+I PY Q I L S+
Sbjct: 901 PALETVEQGGISNHTEAALIHKLLLLLIKAGCKPGDIGVIAPYRQQLRTISGLLQASAFT 960
Query: 1263 -VEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VE++T+D+YQGRDK IL+SFVRS+ E P LL DW R+NVA+TRAK KL+M+G
Sbjct: 961 GVEVNTVDRYQGRDKSLILLSFVRSTAEEGP---LGELLKDWRRLNVAITRAKSKLLMLG 1017
Query: 1320 SCRTLSK-VPLLKLL 1333
S TL + P+ KLL
Sbjct: 1018 SATTLRRYAPVEKLL 1032
>gi|198433360|ref|XP_002125539.1| PREDICTED: similar to DNA2 DNA replication helicase 2-like (yeast)
[Ciona intestinalis]
Length = 1322
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 340/1046 (32%), Positives = 507/1046 (48%), Gaps = 134/1046 (12%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPD 450
K + + N +S ++ V L +W + + GD +N++ + C V + N L+ HPD
Sbjct: 310 KTITVENTKSKQQHQVILKHEWAESNLDSGDIINLVPNQESAEPCTVIDGKTNLLVHHPD 369
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSE-----RSISA--LLGTLLHQIFQAGLMKEIPT 503
L+SGT V+ S C RR+VL ER K +E ++S+ L+GT++H IFQ + + P
Sbjct: 370 TLISGTTVSNSLGCLRRAVLSERFKNTEIATDPNNVSSVMLVGTIVHYIFQTAIKLKPPV 429
Query: 504 MK-FLEEYAR--LVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
K L A+ + +K + A + + + +P++ +WI F+ + T
Sbjct: 430 AKEILLNVAKDAVYSRKYFADMLAMNTDPKAVLTQVENYLPQIESWIKDFRVGKPCAGNT 489
Query: 561 VDF------GSDGLKKLK-----------ISEVTDIEEMAWAPKYGLKGMIDASIRVKIE 603
V+F + K ++ ++EV DIEE W+P+YGLKG ID + KI
Sbjct: 490 VNFQLPTSAAPNRFKPVRGSTLRYDANVALTEVKDIEENVWSPRYGLKGKIDLTGNFKIT 549
Query: 604 SKRNEIN-GMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKH------IDSGLL 656
K+ +LPLE KTGK SMEH QV +YT+ +ER KH + +GLL
Sbjct: 550 DKKTRTTENTVLPLELKTGK---DSHSMEHHVQVSIYTMFCNERRNKHGVPLISLPAGLL 606
Query: 657 YYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA-----------STTQQLPPMLRAYG 705
YL++ +T V ++ D GL+M RN+ A+ I K +TQ PP +
Sbjct: 607 LYLKNLKTSCVPLKPVDSSGLMMLRNKVAHSITKTIMKSNANSFEEFSTQSFPPTIDNDR 666
Query: 706 GNKECSGLGN-----------------------MFDSHIYHLTTAHCSFLRHWDRLIDLE 742
+ CS L N M HLT A ++ RHW LE
Sbjct: 667 TCRNCSQLRNCALVYKTVDESQGRYRPSSELFIMMSQLFSHLTDADLAYFRHWMTCTFLE 726
Query: 743 --AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSP 800
A + + W C++ + L S+ + D FV F R
Sbjct: 727 EQAANKKDKQKRFWLKTPQERFDEGKCITGLKLGGSSVPKPELAD-MFVQAFKRSDNGKE 785
Query: 801 NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS-TESDRLAVASGLITEISRFHVSVSFS 859
N+ + GD V+++ E +A+A+G I I++ +S+
Sbjct: 786 NM---------------------FKVGDLVLVNGNEPSHIAIATGTIHSINKSFISIITD 824
Query: 860 KPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQ--SAQSSQLRRMIV 917
+ S D+D ++ ID + + S L Q ++LR +I+
Sbjct: 825 RDF------SGYDSDM----IYSIDNHIWLGAISTQSSLSNLSLLMSNETQCNKLRHLII 874
Query: 918 DLEAPRFDSGSVFSQDPALSYIWSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
P F F + + I + LN QR+AI +VL +KDY L++GMPG+GKT+T
Sbjct: 875 MHRDPFFAKNLDFIPRSSKNEIAQMLRGLNKTQRQAIKRVLISKDYTLVVGMPGSGKTTT 934
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+V ++ LL+ G +L+TSYT+SAVDNLL+KL F+R+GR VH + + + +
Sbjct: 935 IVAMIRILLLCGLRVLVTSYTHSAVDNLLLKLIKYKTRFLRLGRPNQVHPNVLPYTEAVL 994
Query: 1037 --NINSVEEIKKRLDQVKVVAVTCLGITN------PLLTDKKFDVCIMDEAGQTTLPVSL 1088
N+ S E++K D+ +VV TCL +T+ P FDVCI+DEA Q P L
Sbjct: 995 SQNLKSPTELQKLYDEYRVVGCTCLSVTSHIFFAIPGQNRPIFDVCIVDEASQIAQPACL 1054
Query: 1089 GPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PL + +FVLVGDH QLPPLV S EA++ G + SLFRRL+ P A+ L QYRM +
Sbjct: 1055 APLFHSERFVLVGDHLQLPPLVVSQEAKKMGADESLFRRLTSHKP-ALCELTLQYRMNKE 1113
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSD---LSSCSP-----WLKEALNPCRPVIFVN 1200
IM LSN + Y RL C +A A +K+ + + S P WL ++P VIF++
Sbjct: 1114 IMALSNHVTYEGRLECAHPTVAEATVKLDNYDLVKSMLPDTDIEWLLRTIDPKTSVIFLD 1173
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-- 1258
T AYE++ + N EA ++ I Q L+K IGII P+ Q I +
Sbjct: 1174 TSKREAYESEVEHGIQNMYEATIVTTIAQWLIKAGCSPSKIGIIAPFRKQLRAIEEKMNS 1233
Query: 1259 ---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+ + VEI+T+DKYQGRDK IL+SFVRS + P LL DW R+NV +TRAK KL
Sbjct: 1234 IEENTTLVEINTVDKYQGRDKSVILLSFVRSKKEP--LKGELLNDWRRLNVGITRAKHKL 1291
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQS 1341
+MVG R+L + K +I V S
Sbjct: 1292 VMVGCTRSLLEYEPCKKIIEYVQSNS 1317
>gi|149235917|ref|XP_001523836.1| hypothetical protein LELG_04649 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452212|gb|EDK46468.1| hypothetical protein LELG_04649 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1562
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 326/994 (32%), Positives = 490/994 (49%), Gaps = 138/994 (13%)
Query: 418 IAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC- 476
I PGD V+VI DD V N LI +PD+L+S T +A +CPR+S+L R K
Sbjct: 546 IQPGDIVHVIVT-DDSHPNIVDDTTNLLIWNPDILLSATTIALQINCPRKSILLSRFKFP 604
Query: 477 SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTL 536
++ ++G ++H +FQ + E T++F+ E ++Q+ + S+++ G EN + +
Sbjct: 605 GTTTVPIIVGEIVHFVFQECMATETWTLEFMLEVLEQLMQQYLVSIFSVGEEENKVKLEV 664
Query: 537 VEAIPKMLNWI-ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMID 595
+ + W +K S ++ + E+ DIEE +P +G+KG ID
Sbjct: 665 QKHFLYLKTWFDKYYKKSIGRSSRIENTSERNDIGFACEEILDIEEDIKSPAFGIKGKID 724
Query: 596 ASIRVKIESKRNEING-MILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSG 654
A++ K+++ N+I+G +LP+E KTG+ + H AQ LY LL +RY I S
Sbjct: 725 ATMVAKLQN--NQIDGKFLLPMEIKTGR-----EYVSHSAQATLYALLFKDRYNLDIKSS 777
Query: 655 LLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY---------- 704
+L Y + T+ + DL LI RN+ + + PP+L+
Sbjct: 778 VLVYTKEQLTKRSNINAPDLRALINLRNKVSQ---HHKNNETYPPLLKRAECARCEVQSA 834
Query: 705 ----------GGNKECSGLGNMFDSHIYHLTTAHCS------FLRHWDRLIDLEAKEMQV 748
G +K+C D Y T+H S FL+ WD LI E M
Sbjct: 835 CMVIDSLMEDGNSKDCG-----IDEETYLSYTSHISNPDYKVFLKTWDGLIAKEEAFMSK 889
Query: 749 VKNEIWCSRGSGGNHFTGCLSSIVLDASNE--------------HQKSYRDN-----RFV 789
+W GCL ++ + S + H + R + RF
Sbjct: 890 TIKHLWTIPTEQRLAQGGCLDNLKVVKSTDDEEEEEEDKESLIFHYATVRGDKSTARRFT 949
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITE 848
Y F R ASD L+ D T D VI+S +S + A+ +GL+
Sbjct: 950 YVFER---------ASDAKLLV-------DFQSTKFNVNDRVIISDQSGQFAITNGLVKS 993
Query: 849 ISRFHVSVSFSKPL--------------------RLPGRNSSSDADSLLHEVWRIDKDEI 888
+S + +S + + + G NS S + +++ IDKDE+
Sbjct: 994 VSPSRIVISTRRRIITCDQKLSNFSESNNQVYKSLIRGHNSGSKMN---EKLFIIDKDEM 1050
Query: 889 MTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDD 948
+ RYN++ LFL + S LR ++VDL AP F + S + N
Sbjct: 1051 FYGLGLARYNILSLFLDTTPLS-LRELVVDLRAPTFTQSNSTSNKLV--------NFNPS 1101
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
Q A KV A DYALILGMPGTGK++ +V +K ++ RG ++LLTSYTNSAVDN+L+KL
Sbjct: 1102 QIAAFNKVFAANDYALILGMPGTGKSTLIVEIIKEIVERGETVLLTSYTNSAVDNILLKL 1161
Query: 1009 ------KSQSIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVTCLGI 1061
K + F+RIG V + ++ N I + + +VA TCLG+
Sbjct: 1162 LESNIGKKSPVKFIRIGHPLRVQNSLHQYIPDYANPIQDQSQFIETYCSPNLVAATCLGV 1221
Query: 1062 TNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV--QSTEAREN 1118
+ + +FD CI+DEA Q T P+S+GP+ A KF+LVGDHYQLPPLV + E R
Sbjct: 1222 RDLCFNIRTEFDYCIVDEASQITFPISIGPIQLAKKFILVGDHYQLPPLVLHPAPEVR-F 1280
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
G+ SLFR L+E HP +++ L QYRMC+ IM+LSN LIY ++L CGS +AN + + +
Sbjct: 1281 GLSQSLFRLLAEAHPNSVTELTYQYRMCEEIMQLSNVLIYENKLKCGSHAVANQYLNIPN 1340
Query: 1179 -----------LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
L W+ + V+F++ D L A E + + N +EA LI +I
Sbjct: 1341 PQMISSFTKPGLPQSLQWMNYVFDSNIKVLFLDHDKLNAKEVVRGEAIKNHMEAKLIKQI 1400
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-SVEIHTIDKYQGRDKDCILVSFVRS 1286
+ LV +E K IG+++ Y +Q NL++ LS +EI T D+YQGRDK+CI++S VR
Sbjct: 1401 VKSLVLAGVEEKQIGVMSFYRAQLNLLKKDLSSRLDLEILTADQYQGRDKECIIISLVRL 1460
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
N N LL +W R+NVA+TRAK KLI++GS
Sbjct: 1461 --NDENNAGELLKEWRRLNVAVTRAKSKLIILGS 1492
>gi|367016357|ref|XP_003682677.1| hypothetical protein TDEL_0G00990 [Torulaspora delbrueckii]
gi|359750340|emb|CCE93466.1| hypothetical protein TDEL_0G00990 [Torulaspora delbrueckii]
Length = 1456
Score = 461 bits (1187), Expect = e-126, Method: Compositional matrix adjust.
Identities = 341/1049 (32%), Positives = 537/1049 (51%), Gaps = 152/1049 (14%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVI--GEF-------DDQGKCDVGRENNFLIVHP 449
+Q G+E +V + + W + GD +++I F DD+ +N LI++P
Sbjct: 380 DQDGKEGSVVVRKPWVYLEFEKGDVIHIIEGANFENKRLVSDDKNPVTQLVNDNLLILNP 439
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQIFQAGLMKEIP----T 503
D+L+S T V S C RR+VL + L+ S E SI +G ++H++ Q+ L ++ T
Sbjct: 440 DLLLSATAVGGSIECLRRAVLQQLLEDSQGEPSIVMTIGNIVHELLQSALRYKLNHKTIT 499
Query: 504 MKFLEEYARLVLQKNIESLYACGV---NENDIH---KTLVEAIPKMLNWIILFKDSQDLN 557
+KFLEE +L+ L++ G+ NEN I + + + +++ F +
Sbjct: 500 IKFLEEKLDCLLE-----LFSFGILQCNENLIKIKDEIKTTHLKNIFDFVDQFVKKSNYG 554
Query: 558 TPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLE 617
G+ L I+ + D EE W+P YGLKG +D ++ + R+ ++PLE
Sbjct: 555 CYVSVSGTRKTDPLSIASIIDTEENIWSPIYGLKGFLDVTVDALCKKTRS-----VVPLE 609
Query: 618 FKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGL 677
KTGK S+ H AQ ++YTLL+++RY ID LL Y + ++ + +
Sbjct: 610 VKTGK----SKSISHEAQGLIYTLLLNDRYEIPIDFYLLLYTRKNEITKYPYVLHSIKHV 665
Query: 678 IMRRNEFANDI---IKA-----STTQQLPPMLRA-------------------YGGNKEC 710
+M RN+ + +K Q LPP+L++ G+ E
Sbjct: 666 LMFRNQMTTKLKYRLKEYRNLDPMKQNLPPLLQSSYCDSCNFKAPCMVINNLVEDGDGEL 725
Query: 711 SGLGN----MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG----SGGN 762
SGL N + H+ + + F + ++ LI E + + +++ S+G S G+
Sbjct: 726 SGLKNGEYELLTKHLAKSHSKNAQFFKKYNDLITKEESSITCINKKLFHSQGESQDSVGS 785
Query: 763 HFTGCLSSI-VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD 821
H CLS++ V++ N+ DN H + + PS I ++
Sbjct: 786 H---CLSNLKVVETVNDPA----DNTIYLHTLARAKPS--------------GICASMLN 824
Query: 822 CTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSK--------PLRLPG------- 866
L D + +S E+ +A+G I +I+ + VS + P R G
Sbjct: 825 SHLMKKDRIFISDEAGHFGIANGHIRDIAEDFIIVSTRRKVLNNWVPPERSNGPPHIRSV 884
Query: 867 RNSSSDADSLLHE----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ----------- 911
+ S ADSL+ +RI+K++I S+ R++L+ LFL Q
Sbjct: 885 VDDSITADSLMRTQNMVTYRINKNDIQQGLSLARFSLLNLFLPPVPPGQVIADEASGQVR 944
Query: 912 -----------LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
LR ++VD A RF+S VFS + I + LN DQ+RAI KVL A+
Sbjct: 945 LAKKSEGGDERLRSILVDKVAARFESKCVFSLESCGEIIPTH--LNTDQKRAIEKVLQAQ 1002
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
D+ALILGMPGTGKT+ + +K L G SILLTSYT+SAVDN+L+KLK ++I R+G
Sbjct: 1003 DFALILGMPGTGKTTVIAELIKILASAGKSILLTSYTHSAVDNILLKLKDKNIKIARLGM 1062
Query: 1021 HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGI--TNPLLTDKKFDVCIMDE 1078
+H + Q + ++ + E+ K ++ VVA TCLGI N L + FD I+DE
Sbjct: 1063 KHRIHPDTQVYRPCYESLKTYEDYIKEIESTTVVATTCLGIREINSSLRSRDFDYVILDE 1122
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q ++PV+L PL F KFV+VGDHYQLPPLV++ AR G+E SLF+ L E+HP+++S
Sbjct: 1123 ASQISMPVALAPLRFGEKFVMVGDHYQLPPLVKNEAARIGGLEESLFKILCEDHPESVSE 1182
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS-----SCSP----WLKEA 1189
L QYRMC+ I LSN LIY +L CG+ ++ + + V LS SP W+++
Sbjct: 1183 LTIQYRMCEDIATLSNFLIYDGKLKCGTADVRDRGLDVPHLSRLAKFQTSPTIQRWIEDV 1242
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
L+ R V+F+N D + K ++ NP E ++ + +++ +E K++G++T Y
Sbjct: 1243 LDFQRKVVFLNYDSCSDIQEKSSSDSITNPGELTIVQQCIDGMLECGVEAKNVGVMTLYR 1302
Query: 1249 SQANLIRHSLSV---SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L++ L +EI T D++QGRDKDCI++S VRS N + SLL + R+N
Sbjct: 1303 AQLRLLKEKLQDERHEDLEILTADQFQGRDKDCIVISLVRS--NLEQKSGSLLKELRRVN 1360
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
VA+TRAK KLI++GS +T+S VP ++ I
Sbjct: 1361 VAMTRAKSKLILIGSRKTISSVPEIEKFI 1389
>gi|365984805|ref|XP_003669235.1| hypothetical protein NDAI_0C03320 [Naumovozyma dairenensis CBS 421]
gi|343768003|emb|CCD23992.1| hypothetical protein NDAI_0C03320 [Naumovozyma dairenensis CBS 421]
Length = 1502
Score = 461 bits (1186), Expect = e-126, Method: Compositional matrix adjust.
Identities = 335/1081 (30%), Positives = 543/1081 (50%), Gaps = 142/1081 (13%)
Query: 369 HFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG 428
++LEV E P + K+L +N Q E+ +V + W + GD +++I
Sbjct: 401 RLVILEVRELTLPRIGIQ-----KILSCINSQR-EKSSVIIRRPWSYLEYDVGDVIHIIE 454
Query: 429 EFDDQGKCDVGRE---------NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK--CS 477
+ + K + + +N LI++PD+L S T + S C RRSV+
Sbjct: 455 GKNIENKRLLSDDINPKTQLANDNLLILNPDLLFSATSIGGSIDCLRRSVIQASFNDPRG 514
Query: 478 ERSISALLGTLLHQIFQAG----LMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIH 533
E SI+ +G ++H++ Q + E+ T+++L+E +L+ + C + D+
Sbjct: 515 EPSIAMTIGNIVHELLQDSFRYMMSHELLTIEYLDERLDFLLESFKFDIMVCNESLADVK 574
Query: 534 KTLV-EAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKG 592
+ +V + +L ++ F + G + L IS+V DIEE W+ YGLKG
Sbjct: 575 EQIVKDHAENILQFVNHFVQKSNYGCYVSVSGLKKTQPLSISDVIDIEENIWSSTYGLKG 634
Query: 593 MIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID 652
+D ++ E+ + I PLE KTGK + H AQ ++YTLL++++Y +D
Sbjct: 635 YLDLTVEANTENIK-----CIAPLEVKTGKY----RGLSHEAQGLIYTLLLNDKYDLPVD 685
Query: 653 SGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI---IKASTTQQ-----LPPMLRAY 704
LLYY + + ++M RN+ A +K T ++ LPP+ A
Sbjct: 686 FFLLYYTRDKSMTKFPKILHSIKHILMLRNQMATTFKHQLKEITNRERLEYKLPPLAGAS 745
Query: 705 -----GGNKECSGL------GNMFDSHIYH------------LTTAHCSFLRHWDRLIDL 741
C L GN DS + + +F ++ LI
Sbjct: 746 LCENCNTKDMCMVLNKLAENGNAEDSKLRKGEYELLTNHLLTNLEKNRNFFLKFNDLITK 805
Query: 742 EAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSP 800
E + + E++ G CLS++++D + S + ++ Y F RQ
Sbjct: 806 EESSVCSINAELFLFDSKTRESLNGRCLSNLIVD--DIQGSSQQCGKYTYSFKRQ----- 858
Query: 801 NLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSK 860
N + S++ + I DYVI+S E+ ++ GL+T+IS ++V+ ++
Sbjct: 859 --NQDETLSMLHSQIGI---------NDYVIISDENGHFSLCQGLVTKISSDSITVAINR 907
Query: 861 PL-----RLPGRNSSSDADSL-----LHEV--------WRIDKDEIMTSFSVMRYNLVQL 902
L L N +S + L E+ +RIDK++I + S R+N++ L
Sbjct: 908 KLLNNKITLDNGNRTSIQSVIKPQFNLTEIMATQNLVTYRIDKNDIQQNLSSSRFNILNL 967
Query: 903 FLQSAQSSQL----------------------RRMIVDLEAPRFDSGSVFSQDPALSY-I 939
FL S Q +L RR IVD E+P F + P +SY I
Sbjct: 968 FLPSVQPGELLVDEKTGKSKLTKRSDGGDERMRRFIVDNESPTFVPKD---KPPLISYTI 1024
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ S N++Q AI +V+ A DYALILGMPG+GKT+ + +K L+ S+LLTSYT+S
Sbjct: 1025 PEDSSFNENQIEAIDRVMRANDYALILGMPGSGKTTVISELIKMLVADNKSVLLTSYTHS 1084
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
AVDN+L+KLK D +R+G VH + Q++ ++N+ EE+ + ++ V VVA TCL
Sbjct: 1085 AVDNILLKLKDVEFDIIRLGSKRRVHPDTQRYLPKYDSLNTYEELLETINGVSVVATTCL 1144
Query: 1060 GITNPL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
+ + + L K FD I+DEA Q ++PV+LGPL F KFV+VGDHYQLPPLV++ AR
Sbjct: 1145 SLRDIMFNLRSKDFDYVILDEASQISIPVALGPLRFGIKFVMVGDHYQLPPLVKNEAARS 1204
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
G+E SLF+ E P ++ L QYRMC+ I+ LSN LIY ++L CG++++ N + +
Sbjct: 1205 GGLEESLFKYFCERQPDSVVELTYQYRMCEDIVMLSNYLIYENKLKCGTEQVKNQSLHIP 1264
Query: 1178 DLSSCSP---------WLKEALNPCRPVIFVNTDM-LPAYEAKDHQTLNNPVEACLIAKI 1227
L + WL + L+P R VIF+N D + E ++ T+ N EA L +
Sbjct: 1265 HLENLGQYRKADADQDWLMDVLDPQRKVIFMNYDKCVEITEQANNDTITNVGEAELTRQC 1324
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFV 1284
+ ++ + + +G++T Y +Q L++ L ++ +EI T D++QGRDKDCI++S V
Sbjct: 1325 VKGILTSGVSSDKVGVMTLYRAQLKLLKKVLGSAAYDGLEILTADQFQGRDKDCIIISMV 1384
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
RS N SLL + R+NVA+TRAK KLI++GS +T+S +P +K +N + E++ I
Sbjct: 1385 RS--NAHLNGGSLLKELRRVNVAMTRAKSKLIIIGSQKTISSIPEIKGFMNLLQERNWIY 1442
Query: 1345 N 1345
+
Sbjct: 1443 D 1443
>gi|405951531|gb|EKC19435.1| DNA2-like helicase [Crassostrea gigas]
Length = 1451
Score = 458 bits (1178), Expect = e-125, Method: Compositional matrix adjust.
Identities = 325/995 (32%), Positives = 503/995 (50%), Gaps = 150/995 (15%)
Query: 373 LEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDD 432
+V++K+ P DA+ P + + G V + T I GD V+++G FD
Sbjct: 550 FKVNDKSSVMKPADAEIP------VCHRYGRYSVVKKHYEKSDTHIEEGDVVHILGMFDG 603
Query: 433 QGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQ 491
G C + ++ F+IV+PD+L+SGT V +S C R+S+L+++ K C + +I L G+++H
Sbjct: 604 SGICRISDKDGFIIVNPDLLLSGTTVVSSLFCMRKSILNDKFKGCDKGNIQMLYGSIIHS 663
Query: 492 IFQAGLMKEI--PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIIL 549
+FQ L K+I E + + K I +Y GV + + + + + +P + W+
Sbjct: 664 VFQQVLRKQIFEENQIVTEAESTMKQSKYIHDMYGNGVTDLQVMEEIKKYVPPLQAWLQK 723
Query: 550 FKD-SQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+Q + GS+ + I+ V DIEE W+P++G+KG ID ++ VKI N+
Sbjct: 724 HTQYTQSMMGGQSKTGSN----ITITAVKDIEENIWSPRFGVKGKIDLTVDVKI----NK 775
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+PLE KTG+ SMEH+ QV LY+++ S+R GLL YL+ + +
Sbjct: 776 NQRGTVPLELKTGR---ATFSMEHKGQVTLYSVMSSDRR-PDPGQGLLLYLKQPDMKLIE 831
Query: 669 VQRSDLVGLIMRRNEFA---NDIIKASTTQ---------QLPPMLRAYGGNKECSGLGN- 715
V + G+I RNE A + IK T++ +LP + +C L N
Sbjct: 832 VDHLNKRGIINLRNEMAYYLSQQIKGVTSEDGHVTYSLGRLPEPINNPRACSKCPQLLNC 891
Query: 716 -----------MFDSH---------IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EI 753
+ D H + HL+ +H + HW L+DLE K Q EI
Sbjct: 892 ALYQKNVENRTLSDGHTMQRLVPETLGHLSPSHMDYFLHWCLLLDLENKSGQKSGGLKEI 951
Query: 754 WCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPS-PNLNASDGDSLIG 812
WC G CLS + + +++ F+ HF R P P+LN+ +G
Sbjct: 952 WCLTGPEREKKGDCLSRLTVLPHKTENIQDQESVFI-HFHRDTGPDVPSLNS------VG 1004
Query: 813 AAIPTKDMDCTLRSGDYVILSTE-SDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
L DYVI++ E S+ +AV +G IT IS V
Sbjct: 1005 -----------LLKHDYVIVTVENSELIAVCAGSITNISEEEVV---------------- 1037
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF----DSG 927
LL E S +LR ++++ + P F G
Sbjct: 1038 ----LLTE-----------------------------SCRLRELLIEKKKPEFVLKMSKG 1064
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
+ A K LN Q+ AI+KVL +KDY LI G PGTGKTST+V VK L +
Sbjct: 1065 EIEKVKEAF------KRLNKPQKTAILKVLMSKDYVLIKGFPGTGKTSTIVALVKVLTLL 1118
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIK 1045
G S+LLTSYT+SAVDN+L+KL ++F+R+GR +H ++Q++ + NI +V +++
Sbjct: 1119 GHSVLLTSYTHSAVDNILLKLIKDKVNFIRLGRTSKIHPQVQQYGAEKLTENITNVADLR 1178
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
+ +VVA T LG+T+P+ T ++FDVCIMDEA Q P SLGPL A KFVLVGD Q
Sbjct: 1179 EFYSSQRVVATTALGMTHPVFTQRRFDVCIMDEASQILQPASLGPLFNAHKFVLVGDPKQ 1238
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
LPP+VQS EAR GM+ SLF RL E+ A L QYRM + IM LSN L+Y L CG
Sbjct: 1239 LPPVVQSKEARGLGMDESLFLRL--ENGPATFELNLQYRMNRDIMYLSNTLVYNGCLKCG 1296
Query: 1166 SDEIANAKIK------VSDLSSCSPWLKEAL--NPCRPVIFVNTDMLPAYEAKDHQTL-N 1216
++ +AN ++K + + W+ L P + +F++T+ +PA E +D L
Sbjct: 1297 NESVANNRLKWAKDGQLEKVFEEYSWMTSVLCDGPYKAALFLDTEKVPAKEERDSSGLIK 1356
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-SVEIHTIDKYQGRD 1275
N +EA ++ + + ++ + D+G+I PY Q +IR L+ + VE++T+D+YQGRD
Sbjct: 1357 NVIEAQIVKCLVKSFIQIGVTENDVGVIAPYRKQVTVIRDLLTCNPGVEVNTVDQYQGRD 1416
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
KD I++S RS + ++ + ++G H +++ T+
Sbjct: 1417 KDIIIISLTRSFTSAKDAETKIVGLPHEAHLSFTK 1451
>gi|45190389|ref|NP_984643.1| AEL218Wp [Ashbya gossypii ATCC 10895]
gi|44983285|gb|AAS52467.1| AEL218Wp [Ashbya gossypii ATCC 10895]
Length = 1471
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 321/1058 (30%), Positives = 528/1058 (49%), Gaps = 138/1058 (13%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI-G 428
+VL V E N ++P K+L L + G + V + + W APGD +++I G
Sbjct: 435 LVVLSVKEFNILSNPRQ-----KILTCL-DSDGVKSTVIVRKPWVQMEFAPGDVIHIIEG 488
Query: 429 EF--------DDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL-KCSER 479
+ DD+ +N L+ HPD+L+S T + S C RR+VL ++ + E
Sbjct: 489 KHSSNTRLLSDDKDPITGLINDNLLVQHPDLLLSATMIGNSIDCMRRAVLGAKIIEPGEP 548
Query: 480 SISALLGTLLHQIFQAGLMKEIP----TMKFLEEYARLVLQKNIESLYACGVNENDIHKT 535
SI +G ++H++ Q L + F+E V++K S+ C + + +
Sbjct: 549 SIHITIGCIVHELLQEFLRYRLNHDSIDDDFIESALTEVIEKYKLSILMCNETADSVREI 608
Query: 536 LVE-AIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMI 594
+ + +P + +++ + + G + L IS+ DIEE W+ YG+KG I
Sbjct: 609 IEQFHLPNIRSFVADYVKESNSGCKVNVAGHSQKELLSISKAVDIEENIWSHMYGVKGFI 668
Query: 595 DASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSG 654
DA++ + S + ++ PLE KTGK + + H AQ +YTLL+S+RY +D
Sbjct: 669 DATVETSVGSSKR----LLAPLEIKTGKYKH----ISHEAQGSIYTLLLSDRYDIPVDFH 720
Query: 655 LLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK-----------ASTTQQLPPMLRA 703
L+YY +++ L L++ RN+ A+ + A+ LPP+L++
Sbjct: 721 LMYYSKTNDFVKHPTSMVSLKHLLVLRNQLASKLKHNIAEIESRESLANLELHLPPLLKS 780
Query: 704 Y-------------------GGNKECSGL-GNMFDSHIYHLT---TAHCSFLRHWDRLID 740
G+ E SGL G+ +D HL+ + F + + L+
Sbjct: 781 STCDTCHAKTHCMVINKLTENGSIEDSGLAGSEYDDLTGHLSKNLARYREFYQKYIGLLH 840
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPS 799
LE + E++ +G C+S +V+ + S + + Y F R
Sbjct: 841 LEESSLNSNSKEMFLMDSELREATSGRCISGLVI-----QEVSMVGDLYHYKFRRSSTSD 895
Query: 800 PNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFS 859
N +P ++ L + + +S E ++A+G + +IS ++ +S S
Sbjct: 896 VN-------------VPM--INSQLAVNESIYISDELGHFSLATGHVKDISDSYIVISCS 940
Query: 860 KPLRLPGRNSSSDAD-------------SLLHE------VWRIDKDEIMTSFSVMRYNLV 900
+ L +S ++ SL H +R+DK E S+ R+N++
Sbjct: 941 RRFNLDNIRASGFSEDQQQVIESVLTETSLQHTNVTERLTYRVDKYEHAVGLSMSRFNIL 1000
Query: 901 QLFLQS---------------------AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
LFL + RR++V+ + PRF S+ P +Y
Sbjct: 1001 NLFLPEIDPDKEYVNANGDRIRLNKWHGGDGKTRRLLVEGQPPRF------SKRPQFTYT 1054
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
E N DQ +AI K + KDYALILGMPGTGKT+ + ++ L G ++LLTSYT+S
Sbjct: 1055 PDETKFNKDQLKAIDKAIRCKDYALILGMPGTGKTTLIAEIIRILARNGKNVLLTSYTHS 1114
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
AVDN+L+KL + R+G VH ++ S ++ + EE+ +D+ +V+A TCL
Sbjct: 1115 AVDNILLKLLDSELQIARLGYKHRVHPGVRHLVQSLEDVQTHEELVSSVDEFQVIATTCL 1174
Query: 1060 GITNPLLT--DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
G+ + LL K FD I+DEA Q +LP++LGP+ + +F+LVGDHYQLPPLV++ A+E
Sbjct: 1175 GVNDSLLALRTKNFDYVILDEASQVSLPIALGPIRYGDRFLLVGDHYQLPPLVRNHIAKE 1234
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
+G+E +LF+ L ++HP ++ L QYRM + IM LSN LIY +L CG +A +++
Sbjct: 1235 DGLEDTLFQLLCDQHPSCMTELTLQYRMNEDIMALSNELIYDGKLKCGDRSVAERALRIE 1294
Query: 1178 DLSSCS-PWLKEALNPCRPVIFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKNE 1235
S + PWL+EALNPC+ VI +N D +P+ E D + N E+ ++ + L+
Sbjct: 1295 VPKSITQPWLREALNPCKRVIMINYDNIPSIRETADRDNIRNEGESRIVGLLVSGLLSCG 1354
Query: 1236 IEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
DIG++T Y +Q L++ L+ S++E+ T D++QGRDK+C+++S VR NP
Sbjct: 1355 ASSADIGVMTLYRAQLRLLKSELAPHSSTLEVLTADQFQGRDKECVIISTVRC--NPSLN 1412
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
+LL + R+NVA++RAK KLI+V S T+S VP L+
Sbjct: 1413 AGALLRELRRVNVAMSRAKSKLILVCSLATISSVPQLQ 1450
>gi|374107859|gb|AEY96766.1| FAEL218Wp [Ashbya gossypii FDAG1]
Length = 1471
Score = 456 bits (1172), Expect = e-125, Method: Compositional matrix adjust.
Identities = 324/1059 (30%), Positives = 529/1059 (49%), Gaps = 140/1059 (13%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI-G 428
+VL V E N ++P K+L L + G + V + + W APGD +++I G
Sbjct: 435 LVVLSVKEFNILSNPRQ-----KILTCL-DSDGVKSTVIVRKPWVQMEFAPGDVIHIIEG 488
Query: 429 EF--------DDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL-KCSER 479
+ DD+ +N L+ HPD+L+S T + S C RR+VL ++ + E
Sbjct: 489 KHSSNTRLLSDDKDPITGLINDNLLVQHPDLLLSATMIGNSIDCMRRAVLGAKIIEPGEP 548
Query: 480 SISALLGTLLHQIFQAGLMKEIP----TMKFLEEYARLVLQKNIESLYACGVNENDIHKT 535
SI +G ++H++ Q L + F+E V++K S+ C + + +
Sbjct: 549 SIHITIGCIVHELLQEFLRYRLNHDSIDDDFIESALTEVIEKYKLSILMCNETADSVREI 608
Query: 536 LVE-AIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMI 594
+ + +P + +++ + + G + L IS+ DIEE W+ YG+KG I
Sbjct: 609 IEQFHLPNIRSFVADYVKESNSGCKVNVAGHSQKELLSISKAVDIEENIWSHMYGVKGFI 668
Query: 595 DASIRVKI-ESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDS 653
DA++ + SKR ++ PLE KTGK + + H AQ +YTLL+S+RY +D
Sbjct: 669 DATVETSVGPSKR-----LLAPLEIKTGKYKH----ISHEAQGSIYTLLLSDRYDIPVDF 719
Query: 654 GLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK-----------ASTTQQLPPMLR 702
L+YY +++ L L++ RN+ A+ + A+ LPP+L+
Sbjct: 720 HLMYYSKTNDFVKHPTSMVSLKHLLVLRNQLASKLKHNIAEIESRESLANLELHLPPLLK 779
Query: 703 AY-------------------GGNKECSGL-GNMFDSHIYHLT---TAHCSFLRHWDRLI 739
+ G+ E SGL G+ +D HL+ + F + + L+
Sbjct: 780 SSTCDTCHAKTHCMVINKLTENGSIEDSGLAGSEYDDLTGHLSKNLARYREFYQKYIGLL 839
Query: 740 DLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMP 798
LE + E++ +G C+S +V+ + S + + Y F R
Sbjct: 840 HLEESSLNSNSKEMFLMDSELREATSGRCISGLVI-----QEVSMVGDLYHYKFRRSSTS 894
Query: 799 SPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSF 858
N +P ++ L + + +S E ++A+G + +IS ++ +S
Sbjct: 895 DVN-------------VPM--INSQLAVNESIYISDELGHFSLATGHVKDISDSYIVISC 939
Query: 859 SKPLRLPGRNSSSDAD-------------SLLHE------VWRIDKDEIMTSFSVMRYNL 899
S+ L +S ++ SL H +R+DK E S+ R+N+
Sbjct: 940 SRRFNLDNIRASGFSEDQQQVIESVLTETSLQHTNVTERLTYRVDKYEHAVGLSMSRFNI 999
Query: 900 VQLFLQS---------------------AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ LFL + RR++V+ + PRF S+ P SY
Sbjct: 1000 LNLFLPEIDPDKEYVNANGDRIRLNKWHGGDGKTRRLLVEGQPPRF------SKRPQFSY 1053
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
E N DQ +AI K + KDYALILGMPGTGKT+ + ++ L G ++LLTSYT+
Sbjct: 1054 TPDETKFNKDQLKAIDKAIRCKDYALILGMPGTGKTTLIAEIIRILARNGKNVLLTSYTH 1113
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTC 1058
SAVDN+L+KL + R+G VH ++ S ++ + EE+ +D+ +V+A TC
Sbjct: 1114 SAVDNILLKLLDSELQIARLGYKHRVHPGVRHLVQSLEDVQTHEELVSSVDEFQVIATTC 1173
Query: 1059 LGITNPLLT--DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
LG+ + LL K FD I+DEA Q +LP++LGP+ + +F+LVGDHYQLPPLV++ A+
Sbjct: 1174 LGVNDSLLALRTKNFDYVILDEASQVSLPIALGPIRYGDRFLLVGDHYQLPPLVRNHIAK 1233
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
E+G+E +LF+ L ++HP ++ L QYRM + IM LSN LIY +L CG +A +++
Sbjct: 1234 EDGLEDTLFQLLCDQHPSCMTELTLQYRMNEDIMALSNELIYDGKLKCGDRSVAERALRI 1293
Query: 1177 SDLSSCS-PWLKEALNPCRPVIFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKN 1234
S + PWL+EALNPC+ VI +N D +P+ E D + N E+ ++ + L+
Sbjct: 1294 EVPKSITQPWLREALNPCKRVIMINYDNIPSIRETADRDNIRNEGESRIVGLLVSGLLSC 1353
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
DIG++T Y +Q L++ L+ S++E+ T D++QGRDK+C+++S VR NP
Sbjct: 1354 GASSADIGVMTLYRAQLRLLKSELAPHSSTLEVLTADQFQGRDKECVIISTVRC--NPSL 1411
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
+LL + R+NVA++RAK KLI+V S T+S VP L+
Sbjct: 1412 NAGALLRELRRVNVAMSRAKSKLILVCSLATISSVPQLQ 1450
>gi|156848392|ref|XP_001647078.1| hypothetical protein Kpol_1050p80 [Vanderwaltozyma polyspora DSM
70294]
gi|156117761|gb|EDO19220.1| hypothetical protein Kpol_1050p80 [Vanderwaltozyma polyspora DSM
70294]
Length = 1505
Score = 454 bits (1169), Expect = e-124, Method: Compositional matrix adjust.
Identities = 331/1043 (31%), Positives = 533/1043 (51%), Gaps = 147/1043 (14%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GEF--------DDQGKCDVGRENNFLIVHPDVL 452
GE +V + W + GD +++I G+ DD+ +N LI++PD+L
Sbjct: 436 GETSSVIIRHPWVYLEFEAGDIIHIIEGKHSENKRLLSDDKHPKTQLINDNLLILNPDIL 495
Query: 453 VSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
+S T V S C RR+VL ++ S E IS +LGT++H++ Q L ++ K EY
Sbjct: 496 LSATIVGNSIECLRRAVLQSIVQDSRGEPDISMILGTIIHELVQDALRYKVENNKLSAEY 555
Query: 511 AR----LVLQKNIESLYACGVNENDIHKTLV----EAIPKMLNWIILFKDSQDLNTPTVD 562
L+L+++ S+ C + DI + ++ E I K +N I+ +
Sbjct: 556 LENTLDLLLEEHSFSILLCNCSITDIKQRIMNEHFENIMKFINNIV---QKSNYGKYVSI 612
Query: 563 FGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGK 622
G+ K + +S V DIEE W+ YGLKG IDA++ +ES + + PLE KTGK
Sbjct: 613 SGTRQKKPISLSNVFDIEENIWSTVYGLKGFIDATVEAHVES-----DYFVAPLEIKTGK 667
Query: 623 IPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRN 682
S+ H AQ ++YTLL++++Y + LL Y + + + L ++M RN
Sbjct: 668 ----AKSVSHEAQGLIYTLLLTDKYELPVKFYLLLYTRYNDLTSYTRSIATLKHVLMFRN 723
Query: 683 EFA-------NDI-IKASTTQQLPPMLRAYGGN-----KECSGLGNMFDSHI-------- 721
+ + N+I K S LPP+LR + EC L + +
Sbjct: 724 QMSIRLKYRLNEINSKTSFKMTLPPILRGSFCDTCYMKSECMVLNKLLEDGTSTEAGLRD 783
Query: 722 --YHLTTAHCS--------FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSS 770
Y + T H + F ++ LI E + + E++ + +G C+S+
Sbjct: 784 GEYEILTNHLTKNQERYKEFFMKYNDLITKEESSLTCMNKEMFLLDSTTRESISGRCISN 843
Query: 771 IVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
+++ ++ S + +F+Y F R + D S I ++ L + D V
Sbjct: 844 LIVAEYPSNKAS--EGKFLYEFKR---------SQDAKSSISM------LNSHLTNNDLV 886
Query: 831 ILSTESDRLAVASGLITEISRFHVSVSFSKPL----------------RLPGR---NSSS 871
+S E A+ G ++ IS+ + +S SK L +P + NS S
Sbjct: 887 YISDEKGHFAICDGRVSSISKSSIVISTSKRLLDNNIILNGNQVKGITNVPQKVADNSLS 946
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ-------------------- 911
++ + +RIDK+E+ + ++ R NL+ LFL +++
Sbjct: 947 SRNNTM--TYRIDKNELQSGLALARANLLNLFLPPVDTTEVIIDEKTGNSRNLKESEGGN 1004
Query: 912 --LRRMIVDLEAPRFDSGSVFSQDPALSY-IWSEKSLNDDQRRAIIKVLTAKDYALILGM 968
LR +IVD + P F + P + Y I + S N+DQ AI KV+ A DY+LILGM
Sbjct: 1005 ARLRSIIVDCKPPSFKKDG---EKPIIPYTIEKDLSFNEDQINAIDKVMRAYDYSLILGM 1061
Query: 969 PGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI 1028
PGTGKT+ + +K L+ +ILLTSYT+SAVDN+LIK+ + +++ +R+G + VH E
Sbjct: 1062 PGTGKTTVIAEIIKILVANKKTILLTSYTHSAVDNVLIKMSNTNMNIIRLGSKQRVHPES 1121
Query: 1029 QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPV 1086
QK+ L +I++ E+ + ++ VVA TCLGI + +LT +K FD I+DEA Q +LPV
Sbjct: 1122 QKYTLDYDSIDNYEQYLEVINSASVVATTCLGINDVMLTMREKDFDYVILDEASQVSLPV 1181
Query: 1087 SLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
+LGPL F KF+LVGDH+QLPPLV++ AR G+E+S F+ L ++ P+++S+L+ QYRMC
Sbjct: 1182 ALGPLRFGRKFILVGDHHQLPPLVKNEAARLGGLEVSPFQMLCQKFPESVSSLRYQYRMC 1241
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSD--------LSSCSPWLKEALNPCRPVIF 1198
+ I++LSN L+Y ++L CG++++ N ++V + + WL+ ++P VIF
Sbjct: 1242 EDIVKLSNFLVYENQLMCGTEKVKNQGLEVPNPDNLNLFHIPGKHNWLENVISPQNKVIF 1301
Query: 1199 VNTDMLPA-YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
+N D E D + N E L + + + I K+IG+++ Y Q L++
Sbjct: 1302 LNYDNCKTIVENSDTDNITNEGEVNLAYQCVRAFTNSGISTKNIGVMSLYRGQIRLLKRK 1361
Query: 1258 LS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
S +EI T D++QGRDKDCI++S VR N SLL + R+NVA++RAK K
Sbjct: 1362 FEKERYSKLEILTADQFQGRDKDCIIISLVR--RNNELNGGSLLKELRRVNVAMSRAKSK 1419
Query: 1315 LIMVGSCRTLSKV----PLLKLL 1333
LI++GS T+ V P + LL
Sbjct: 1420 LIIIGSKTTIRSVIELQPFIHLL 1442
>gi|409043697|gb|EKM53179.1| hypothetical protein PHACADRAFT_147492 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1180
Score = 454 bits (1168), Expect = e-124, Method: Compositional matrix adjust.
Identities = 326/1029 (31%), Positives = 500/1029 (48%), Gaps = 155/1029 (15%)
Query: 398 NEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE------------NNFL 445
E E R V L +DW +VI GD +NVIG + + + + L
Sbjct: 147 TEPDDEPRRVILRDDWAMSVIKSGDVINVIGTWTEDSSSSSKSKPTPTITLTSLPTSPLL 206
Query: 446 IVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTM 504
I HPD+LV+ T ++++ +C RR +L ++ + AL+ G +LH++ Q L +
Sbjct: 207 IHHPDILVTATALSSTPTCLRRPLLGLLVRSATDVTPALVWGNILHEVMQTCLREGRWDK 266
Query: 505 KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILF-----KDSQDLNTP 559
++++ V + ++ L V+ + + + + + + KD+ L
Sbjct: 267 SWVDDRIEEVARTSLGDLMRLDVDVDQAKREVWARAGGLETFAARYMFNSPKDNAALTNT 326
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL----- 614
+ G L L IS + DIEE W+P YGLKG IDAS++ + + + +
Sbjct: 327 RSERGQSSL--LAISRLHDIEEDIWSPTYGLKGKIDASVQAVVTDIDDTSSPFTIVQPTR 384
Query: 615 -------PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
PLE KTG+ G MEHRAQ +LYTLLMSERY + SGLLYY QS++ V
Sbjct: 385 TTTSHPAPLEIKTGRAVAG---MEHRAQTMLYTLLMSERYGAEVPSGLLYYTQSEEVVRV 441
Query: 668 MVQRSDLVGLIMRRNEFANDIIK---------ASTTQQLPPMLRAYGGNKEC-------- 710
+++ L MRRNE A I++ A LPP + + C
Sbjct: 442 PTAPNEMRALAMRRNELAGWIMRRIRQGEAENAVEEAFLPPTIDSARVCGRCYSVDTCML 501
Query: 711 ------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG 758
S + ++++ HLT H +F + W+RL+ LE ++ + E+W R
Sbjct: 502 YRKAVEQVEDTSSPIADIYELKTSHLTPTHTAFFKKWERLVGLEEHDLVRFRKELWTLRA 561
Query: 759 SGGNHFTGCLSSIVLD-------ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
+ + + +VLD A K + + + Y FV+ + S N G L
Sbjct: 562 TERERYGRAFADMVLDTTFTPSDAPPRRGKEGKIHSYTYRFVKGDVAS---NVLSGGLLN 618
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
G + GD V +S E LA A G I E++ HV V L LP + +
Sbjct: 619 G----------QMNVGDAVTVSVEPTLLAFAKGFIIELTPEHVIVGVDHALELPSVRARA 668
Query: 872 DADSL-LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
AD V+RID+DE+ + +R NL QLF ++L ++VDL PRF+ F
Sbjct: 669 KADGGDAPVVFRIDRDELGGGMARIRDNLAQLFYADG-CTRLLSLVVDLVPPRFNDLLGF 727
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
D A I SLN +Q+ AI +VL A+DYALILGMPGTGKT+ + ++ L++ G +
Sbjct: 728 VPDGAKGII---NSLNANQQEAIRRVLLAEDYALILGMPGTGKTTVIAALIRCLVLLGKT 784
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDF--VRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKR 1047
+LLTSYT+SAVDN+L+KLK + +DF +R+G + VH ++++ L A ++E+++
Sbjct: 785 VLLTSYTHSAVDNILLKLKDR-VDFGILRLGNVDKVHPDVKELALGAREPPRTIEQLENW 843
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+ VVA TCL I
Sbjct: 844 VISPPVVATTCLTID--------------------------------------------- 858
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
Q+ +A+ G+++SLFR LSE HP+A+ L QYRM + IM LSN LIYGDRL CG++
Sbjct: 859 ---QNKQAKTQGLDVSLFRMLSEAHPKAVVDLNEQYRMNKDIMLLSNRLIYGDRLRCGNE 915
Query: 1168 EIANAKIKVSDL---------SSCSP--WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
E+A +K + +C W+++ L+ +FV+TD +PA E++
Sbjct: 916 EVARRGLKTNKAWLDAVHESQGNCKAGCWIEQLLDESSKAVFVDTDAVPAPESRVGDLTQ 975
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRD 1275
N +EA L+A L ++ + IG+++ Y Q L+ + L VEI T D+ QGRD
Sbjct: 976 NSIEAQLVASFVAALTRSGVTPNQIGVLSLYRQQIKLVSYLLREHKGVEILTADRSQGRD 1035
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
KD I++S VRS N LL DW RINV+ TRA+ KL+++GS +TL+ PLL+
Sbjct: 1036 KDVIVISMVRS--NTEGQIGDLLKDWRRINVSFTRARCKLVIIGSRKTLASTPLLEEFFK 1093
Query: 1336 KVGEQSGIL 1344
+ + IL
Sbjct: 1094 LMDSKDWIL 1102
>gi|395324563|gb|EJF57001.1| Dna2-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 1100
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 332/1052 (31%), Positives = 501/1052 (47%), Gaps = 177/1052 (16%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKC-----DVGRENNFLI 446
K+L + + E + L +DW H + PGD VN IG++ + V + N+ I
Sbjct: 52 KILDVTAVPTKEHHQIILRDDWTHADVCPGDIVNAIGDWSREPSTGVLTISVCSKANYFI 111
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMK 505
HPD+L++ T ++ + C RR +L ++ S +L+ G +LH++ Q L K
Sbjct: 112 HHPDILITSTSLSNASHCSRRPLLANMVRSSSDVTPSLVWGNILHEVMQTCLSVAKWDDK 171
Query: 506 FLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDF-- 563
F+++ Q+++ L G++ + + ++E + + F D +P +
Sbjct: 172 FMDKQISEAAQRSLGELLRIGMS---MPQAIIE-VKARAKGLRAFADKYIAPSPKPEALM 227
Query: 564 -----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMI----- 613
D L I ++ DIEE W+P YGLKG IDAS+ ++ +
Sbjct: 228 TNTRASRDERSLLAIPQLYDIEEDIWSPAYGLKGKIDASVEAVVQDIDDSSTPFARAAPQ 287
Query: 614 -------LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG 666
+P E KTG+ G MEHRAQ +LYTLLM ERY I SGLLYY QS++
Sbjct: 288 VRESRSPMPFEIKTGRAVAG---MEHRAQTMLYTLLMGERYGTEIPSGLLYYTQSEEVVR 344
Query: 667 VMVQRSDLVGLIMRRNEFANDIIK-----------------ASTTQQLPPML-RAYGGNK 708
V R++L L++ RNE A ++ +T L L N+
Sbjct: 345 VPAARNELRALLVSRNELAGHMMSRLRAKGEIAVSEDQVSGEATIDDLESFLPSTIDDNR 404
Query: 709 EC-----------------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKE 745
C S + +++ HLT+A +F + W+ LI LE K+
Sbjct: 405 TCGKCFALDTCMLYRKAVEGVVDTTSDIADIYALKTGHLTSAQAAFFKKWEALISLEEKD 464
Query: 746 MQVVKNEIWCSRGSGGNHFTGCLSSIVLDA--------SNEHQKSYRDNRFVYHFVRQHM 797
+ + E+W C S +VLD +K + +R Y FV+
Sbjct: 465 LVRFRKELWTMSAPEREEKGRCFSDMVLDLFYTPPDSLKPTTKKEGKIHRLTYRFVKAK- 523
Query: 798 PSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVS 857
S G SL+ + GD V++S E LA+A G + E++ V +
Sbjct: 524 -------SGGISLLSGHMGI---------GDAVVVSVEPGLLALARGFVIELAPESVVLG 567
Query: 858 FSKPL-------RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSS 910
L RL GR D + V+RIDKDE+ + +R NL QLF A S
Sbjct: 568 VDHELDEEMIMDRLRGRREGF-VDKV---VFRIDKDEMFGGMARIRDNLAQLFYAGADSR 623
Query: 911 QLRRMIVDLEAPRF--DSGS--VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALIL 966
L +IVDL PRF D G V PAL++ LN DQ A+ VL A+DYALIL
Sbjct: 624 MLE-LIVDLTEPRFVEDEGDHLVAKTAPALAH------LNKDQLLAVRTVLRAQDYALIL 676
Query: 967 GMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHK 1026
GMPGTGKT+ + ++ L+ G ++LLTSYT+SAVDN+L+KL D +R+G + +H
Sbjct: 677 GMPGTGKTTVIAAIIEQLVNAGKTVLLTSYTHSAVDNILMKLDDAGFDVLRLGNLDKIHP 736
Query: 1027 EIQKHCLSAMNI-NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
E+Q L+A + ++E+++ ++ VVA TCL I
Sbjct: 737 EVQSRTLAARPLAKTIEQLEHQVMSPPVVATTCLTI------------------------ 772
Query: 1086 VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM 1145
DH + V++ AR+ G+E+SLFRRLS+ HP+A+ L QYRM
Sbjct: 773 ----------------DHDFIALQVKNKAARKGGLEVSLFRRLSDAHPEAVVDLTHQYRM 816
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIK----------VSDLSSCSP---WLKEALNP 1192
IM LSN LIY +RL CGSD +A+ + V S+C WL + ++
Sbjct: 817 NSDIMLLSNKLIYSNRLKCGSDSVASRGLHLPQEKKFMALVHSRSTCRDSGCWLSQLMSE 876
Query: 1193 CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
+FV+TD +PA++++ + N +EA L+ ++T+ L+ E IG+I+ Y Q
Sbjct: 877 SCKAVFVDTDNVPAHDSRVGDLVENQIEASLVHQVTECLLGCGAEQHQIGVISLYRQQLK 936
Query: 1253 LIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
L+ + L +EI T D+ QGRDKDCI++S VRS N L+ DW R+NV+ TRA
Sbjct: 937 LLSYLLQERKGLEILTADRSQGRDKDCIIISMVRS--NSEGLIGELMKDWRRMNVSFTRA 994
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
+ KLI++GS +TL + PLLK + Q I
Sbjct: 995 RSKLIIIGSRKTLQQAPLLKDFFELMDRQGWI 1026
>gi|19483918|gb|AAH25182.1| Dna2 protein [Mus musculus]
Length = 800
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 301/823 (36%), Positives = 437/823 (53%), Gaps = 99/823 (12%)
Query: 580 EEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILY 639
EE W+P++GLKG ID ++ VKI + ++ ++PLE KTGK N S+EHR+QV+LY
Sbjct: 1 EESIWSPRFGLKGKIDVTVGVKIH-RDCKMKYKVMPLELKTGKESN---SIEHRSQVVLY 56
Query: 640 TLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----KASTTQ 695
TLL ER + ++G L YL++ Q V D L+ RN A ++ +A+ +
Sbjct: 57 TLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNWLAASLLHRVSRAALGE 115
Query: 696 Q-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLTTA 727
+ LP ++ K CS +GN HL A
Sbjct: 116 EARLSALPQIIEEEKTCKYCSQMGNCALYSRAVEEQGDDASIPEAMLSKIQEETRHLQLA 175
Query: 728 HCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRD 785
H + W ++ LE+ K+ + IW + S C+ ++V E D
Sbjct: 176 HLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPASELEESGNCVGNLV---RMEPVSRVCD 232
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASG 844
+++++F R++ P P N L +GD +ILS E +L A++ G
Sbjct: 233 GQYLHNFQRKNGPMPATN--------------------LMAGDRIILSGEERKLFALSKG 272
Query: 845 LITEISRFHVSVSFSKPLR-LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
+ ++++ V+ + L LP V+R+D++E S NL +L
Sbjct: 273 YVKKMNKAVVTCLLDRNLSTLPATT-----------VFRLDREERHGDISTPLGNLSKLM 321
Query: 904 LQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ S +LR +I+D P+F + SV D + K LN QR+A+ +VL +KD
Sbjct: 322 ESTDPSKRLRELIIDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLLSKD 381
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
Y LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL + F+R+G+
Sbjct: 382 YTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKFKVGFLRLGQS 441
Query: 1022 EVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
VH +IQK + +I S+ +++ + +VA TC+GI +P+ + K FD CI+D
Sbjct: 442 HKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVD 501
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E + A+
Sbjct: 502 EASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVVNREARALGMSESLFKRL-ERNESAVV 560
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------SCSPW 1185
L QYRM + IM LSN L Y +L CGSD +ANA + + +L S S W
Sbjct: 561 QLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPNLKDARLSLQLYADYSDSSW 620
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L L P PV F+NTD +PA E ++ ++N EA LI +T +K DIG+I
Sbjct: 621 LAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIA 680
Query: 1246 PYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PY Q +I L SV VE++T+DKYQGRDK ILVSFVRS+E+ LL DW
Sbjct: 681 PYRQQLRIISDLLAQSSVGMVEVNTVDKYQGRDKSLILVSFVRSNED--GTLGELLKDWR 738
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVALTRAK KLI++GS +L + P L L + + + IL+
Sbjct: 739 RLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDHLNTEQLILD 781
>gi|207344536|gb|EDZ71650.1| YHR164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1435
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 316/1019 (31%), Positives = 517/1019 (50%), Gaps = 137/1019 (13%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVI-GE--------FDDQGKCDVGRENNFLIVHPDVL 452
GE+ +V + W + GD +++I G+ DD+ +N L+++PDVL
Sbjct: 448 GEQSSVVVRHPWVYLEFEAGDVIHIIEGKNIENKRLLSDDKNPKTQLANDNLLVLNPDVL 507
Query: 453 VSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP----TMKF 506
S T V +S C RRS+L + + E S+ LG ++H++ Q + ++ +M+
Sbjct: 508 FSATSVGSSVGCLRRSILQMQFQDPRGEPSLVMTLGNIVHELLQDSIKYKLSHNKISMEI 567
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLV--EAIPKMLNWIILFKDSQDLNTPTVDFG 564
+ + +L+ S+ C E K LV E +L ++ F + T G
Sbjct: 568 IIQRLDSLLETYSFSIIICN-EEIQYVKELVMKEHAENILYFVNKFVSKSNYGCYTSISG 626
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ + + IS V DIEE W+P YGLKG +DA++ +E+ + I +PLE KTGK
Sbjct: 627 TRRTQPISISNVIDIEENIWSPIYGLKGFLDATVEANVENNKKHI----VPLEVKTGK-- 680
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+ + Q ++YTLL+++RY I+ LLY+ + + ++M RN
Sbjct: 681 --SRSVSYEVQGLIYTLLLNDRYEIPIEFFLLYFTRDKNMTKFPSVLHSIKHILMSRNRM 738
Query: 685 ANDII--------KASTTQQLPPMLRAYG-------------------GNKECSGL---- 713
+ + +A + +LPP+LR G E SGL
Sbjct: 739 SMNFKHQLQEVFGQAQSRFELPPLLRDSSCDSCFIKESCMVLNKLLEDGTPEESGLVEGE 798
Query: 714 GNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIV 772
+ +H+ + F ++ LI E + V E++ GS +G CLS +V
Sbjct: 799 FEILTNHLSQNLANYKEFFTKYNDLITKEESSITCVNKELFLLDGSTRESRSGRCLSGLV 858
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
+ EH+K+ + ++Y F R+ N ++ S++ + I + D+VI+
Sbjct: 859 VSEVVEHEKT--EGAYIYCFSRRR------NDNNSQSMLSSQIA---------ANDFVII 901
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPL---RLPGRNSS-----SDADSLLHE----- 879
S E + G + I+ + +S + L RL + S +S L +
Sbjct: 902 SDEEGHFCLCQGRVQFINPAKIGISVKRKLLNNRLLDKEKGVTTIQSVVESELEQSNLIA 961
Query: 880 -----VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ----------------------SSQL 912
+RIDK++I S S+ R+NL+ LFL + + L
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWS-EKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
R ++VD AP+F DP + Y S + +LN +Q+ AI KV+ A+DYALILGMPGT
Sbjct: 1022 RSLLVDNRAPKFRDAI---DDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGT 1078
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G +LLTSYT+SAVDN+LIKL++ SI +R+G VH + QK+
Sbjct: 1079 GKTTVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNTSISIMRLGMKHKVHPDTQKY 1138
Query: 1032 CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKKFDVCIMDEAGQTTLPVSLG 1089
+ ++ S + +++ VVA TCLGI + L T +K FD I+DEA Q ++PV+LG
Sbjct: 1139 VPNYASVKSYNDYLSKINSTSVVATTCLGINDILFTLNEKDFDYVILDEASQISMPVALG 1198
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
PL + ++F++VGDHYQLPPLV++ AR G+E SLF+ E+HP++++ L QYRMC I
Sbjct: 1199 PLRYGNRFIMVGDHYQLPPLVKNDAARLGGLEESLFKTFCEKHPESVAELTLQYRMCGDI 1258
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKV----------SDLSSCSPWLKEALNPCRPVIFV 1199
+ LSN LIY ++L CG++E+ +++ ++ ++ WL++ L P R V+F+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSQYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 1200 NTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
N D P E + + N EA L + + ++ + + +DIG++T Y +Q L++
Sbjct: 1319 NYDNCPDIIEQSEKDNITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRAQLRLLKKIF 1378
Query: 1259 S---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+ +EI T D++QGRDK CI++S VR N + +LL + R+NVA+TRAK K
Sbjct: 1379 NKNVYDGLEILTADQFQGRDKKCIIISMVR--RNSQLNGGALLKELRRVNVAMTRAKSK 1435
>gi|71021889|ref|XP_761175.1| hypothetical protein UM05028.1 [Ustilago maydis 521]
gi|46100655|gb|EAK85888.1| hypothetical protein UM05028.1 [Ustilago maydis 521]
Length = 1454
Score = 451 bits (1160), Expect = e-123, Method: Compositional matrix adjust.
Identities = 338/1123 (30%), Positives = 523/1123 (46%), Gaps = 251/1123 (22%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQA----- 495
+N L+VHPDVLVS T+VA SC R+ V+ +RL+ S+ ++S ++G +LH++ QA
Sbjct: 341 DNLLVVHPDVLVSATKVADVASCIRKPVVQDRLRGASDVTLSLVMGNMLHELLQACLTAS 400
Query: 496 ---------------GLMKEIPTMK---------------FLEEYARLVLQKNIESLYAC 525
G + +P++ F+E+ ++ NIESLYA
Sbjct: 401 PSVQNFDTIETNEPEGPLDTLPSVSPWPDQWQGIGNFSRTFVEQQVEKQVRANIESLYAI 460
Query: 526 GVNENDIHKTLVEAIPKMLNW--IILFKDSQDLNTPTVDFGSDG------LKKLKISEVT 577
++ +D L E ++ L + P G L K+++ +
Sbjct: 461 ELSTDDAAMQLREKAAPFAHFARTFLLQGEDATFHPEATLRDSGHSHAAPLAKVRLRRIL 520
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKI------------------------------ESKRN 607
D+EE W+P +GLKG ID S+ I E +
Sbjct: 521 DVEEEIWSPIFGLKGKIDVSVECDIFEESEPPAPMTTSAQHGQAFVRGTRTNTSREQSQR 580
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
I ++PLE KTG+ S EHRAQ ++YTL+MS+RY ++ GLLYY +S + +
Sbjct: 581 RITTSVVPLELKTGRAEF--VSTEHRAQTMMYTLMMSDRYGVRVNDGLLYYSKSGELHRI 638
Query: 668 MVQRSDLVGLIMRRNEFA-----------NDIIKASTTQQ----LPPMLRAYGGNKEC-- 710
R+++ LI+ RNE A ND + + +++ LPP + + + C
Sbjct: 639 RFSRNEVRSLIIGRNELAHYLRLDSSRLRNDELVMTASEEPLPVLPPTIDSEHKCRRCYA 698
Query: 711 --------------------------------SG--------LGNMFDSHIYHLTTAHCS 730
SG + ++F+ HLT H
Sbjct: 699 VDGCMLFRRAVENVVEPSEVKLEDIEGISAPKSGRILSKRTPIADIFEQKTGHLTDVHLE 758
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEH---QKSYRDNR 787
F R WDRL++LE ++ ++ E+W C + LD +E + S R
Sbjct: 759 FFRKWDRLLNLEEEDAVRLRREMWTMTAEQRERVGRCFGKMRLDILHESCLPEASGSMRR 818
Query: 788 FVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLIT 847
V+ FVR P+ + A L+ I D V +S E L+VA G ++
Sbjct: 819 VVHRFVRHQDPTQSAEAG----LLSGHITI---------NDPVTVSIEPHMLSVAQGFVS 865
Query: 848 EISRFHVSVSFSKPLRLPGRNSSSDADSLLHE------------VWRIDKDEIMTSFSVM 895
++ + + L + + + ++ H V+RIDKDE+ + +
Sbjct: 866 NLTPTCIEIGLDHSLEAAMQRALVNTNANAHIEPFDVASAAERIVFRIDKDELSSGMGRI 925
Query: 896 RYNLVQLFLQSAQSSQLRR--MIVDLEAPRF--------DSGSVFSQDPALSYI---WSE 942
R NL LFL + ++R ++VDL APRF + + Q+PA I ++
Sbjct: 926 RANLAALFLAPGRGGDVKRRELVVDLRAPRFLQPEQLQKNFSTSSDQEPAEQIIERARAD 985
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
SLN DQ+ I KVLT +DYAL+LGMPGTGKT+ + ++ L+ G ILLTSYT+SAVD
Sbjct: 986 PSLNQDQKVVIDKVLTTQDYALVLGMPGTGKTTIIAKLIELLVKLGKRILLTSYTHSAVD 1045
Query: 1003 NLLIKL---KSQSID----FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVA 1055
+L +L +S+ +D +R+G + VH + + L ++ E+K + VVA
Sbjct: 1046 TILRRLSEDESKRVDSPLRILRLGSKDKVHPDAHQFLLP--RCGTLNELKDAFESPNVVA 1103
Query: 1056 VTCLGITNPLLTDKK---------------------FDVCIMDEAGQTTLPVSLGPLMFA 1094
TCL + + L + FD CI+DEA Q LP LGPL FA
Sbjct: 1104 ATCLSVHHTLFSSGLARRMRSRTTAGDGGDEPFTYLFDYCIVDEASQIPLPTCLGPLRFA 1163
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELS 1153
KFVLVGDH+QLPPLV++ +A++ G++ISLF+ LSE H +A AL+SQYRM IM LS
Sbjct: 1164 DKFVLVGDHHQLPPLVKNAQAKKGGLDISLFKLLSERHGDRATVALRSQYRMNDDIMRLS 1223
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCS------PWLKEALNPCRPVIFVNTD---ML 1204
N ++Y +L G++ + + + + ++ + WL + L P V F++T +
Sbjct: 1224 NEMVYHGQLRAGNERVRDQTLMLGNVEAAKRGAGEDKWLCDLLRPEAKVRFLDTSKRRLE 1283
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS----- 1259
E+K + + N EA ++ +I LV+ I ++TPY Q L+R L
Sbjct: 1284 EVGESKHGELVTNQFEAQVVLRIASLLVQGGCRPDQIAVVTPYRQQLKLLRSLLDKCGDG 1343
Query: 1260 -----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS------------------ 1296
+ ++E+ T D+ QGRDKD ILVSF R+ N + C+ S
Sbjct: 1344 QQLRRLDAIELLTADQSQGRDKDVILVSFTRA--NYQRCSGSSSTMAEAYREEEGAQGGN 1401
Query: 1297 ---LLGDWHRINVALTRAKKKLIMVGSCRTL--SKV--PLLKL 1332
LL D R+NV LTRAK+KLI++G TL S+V PLLK+
Sbjct: 1402 TGELLNDVRRLNVTLTRAKRKLILIGHTATLQGSRVLQPLLKM 1444
>gi|325185515|emb|CCA19997.1| DNA2like helicase putative [Albugo laibachii Nc14]
gi|325188759|emb|CCA23290.1| DNA2like helicase putative [Albugo laibachii Nc14]
Length = 1254
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 332/1001 (33%), Positives = 508/1001 (50%), Gaps = 109/1001 (10%)
Query: 409 LWEDWFHTVIAPGDTVNVI--------------GEFDDQG----KCDVGRENNFLIVHPD 450
L EDW+ T I GDT+N+I ++G V + + +I+HP+
Sbjct: 224 LSEDWYDTDIRVGDTLNLIFLQTTPGIESLYGAHPLTEEGIQTHPILVNNKQHAVIMHPN 283
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
VLV+ T V +F C RR+ + E + S + +ALLGTL H++FQ L + FL
Sbjct: 284 VLVNPTSVTTTFDCVRRAWIRETWRLSASVNPNALLGTLKHELFQEALTCRRWDLAFLLS 343
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK 569
A+ +LQ N L+ CG+++ D L A + W + S+ P D S
Sbjct: 344 KAQSILQTNALQLFDCGMSQVDAMDQLQIAAKEFGKW-MEKSFSRTFGLPIEDTSSSD-T 401
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSS 629
+L I V EE W+ K+GLKG IDA++ + I+PLE KTG ++
Sbjct: 402 RLIIDNVLATEEAIWSTKWGLKGAIDATLLASFSELESP---QIVPLELKTGAQNRLRAH 458
Query: 630 MEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDI- 688
EHR QV+LYTLL+ ERY G+L Y S +T V + + GL+ RN A+
Sbjct: 459 HEHRGQVLLYTLLLGERYGVQGADGILMY-SSGETIRVRSLAAHIRGLVQARNRCASSTF 517
Query: 689 ---IKASTTQQLPPMLRAYGGNKEC--------------------SGLGNMFDSHIYHLT 725
++AS + PPML+ + C SGL +F + HL+
Sbjct: 518 RSSLQASNLRSYPPMLQRRSDCERCFQLDACVLHHYAMEDGDAVSSGLDELFSKKMEHLS 577
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRD 785
+H + + W R+++LE E + S+ S +G S + L S + +S
Sbjct: 578 GSHLRYFQEWMRVLELE---------ERFVSKDSAIGWNSGPSSLMDLQLSRPNHQS--- 625
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGL 845
R + + H S L D + + K + G V L ++DRL V
Sbjct: 626 -RTLCLYGSMH--STTLTTQDRVLVSVESTDKKKRLLHVARGRVVELKVQADRLIVYVET 682
Query: 846 ITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQ 905
+ + +F +S L G S WR+D+D M +FS R NL++L +
Sbjct: 683 LQPVPKFVLSGQ-----SLVGTTFS----------WRLDQDASMQAFSRARENLIRLMIS 727
Query: 906 S--AQSSQLRRMIVDLEAPRFDSGSVFSQDPAL----SYIWSEKSLNDDQRRAIIKVLTA 959
++S LRR ++DLE P+F S + +L S++ ++LN DQR + VL A
Sbjct: 728 GDCVETSVLRRQLIDLEPPKFALESFENLTNSLSNRRSFMTDFEALNADQRIVVCSVLNA 787
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL----KSQSIDF 1015
DY L+LGMPGTGKT + V+ LL RG S+L+TSYT+SAVD+LL K+ +S+
Sbjct: 788 LDYTLVLGMPGTGKTFLLAFIVRVLLARGLSVLITSYTHSAVDHLLGKIVKGFGDESVSM 847
Query: 1016 VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT-NPLLTDKKFDVC 1074
+RIG V+ + + N+ EI+ + + K++ +TCL I + + ++FD C
Sbjct: 848 LRIGAQACVNDPMLAPYVLETTGNAC-EIEAKCLETKLIGITCLSIPHHAVFRKRQFDFC 906
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
I+DEA Q T P+ LG L A FVLVGD +QLPPLV+ +ARE G+ +SLF+RLSE HP
Sbjct: 907 IVDEATQITEPIVLGALACAKTFVLVGDPHQLPPLVKCPQAREKGLNVSLFQRLSEVHPG 966
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK----VSDLSSCSPWLKEAL 1190
A+ L QYRM + IM+L N L+Y ++L CG+ +A ++K + L L
Sbjct: 967 AVRQLTIQYRMNEDIMQLVNHLVYKNQLKCGNSNVAKKRLKLFWAIDGRKKSVSTLASML 1026
Query: 1191 NPCRPVIFVNTDMLP--AYEAKDHQTLN------NPVEACLIAKITQELVKNEIEGKDIG 1242
+ V ++NTD L AYE+K + N N EA +I + + L+ ++ ++I
Sbjct: 1027 ENQKGVTWINTDPLGELAYESKASTSGNGASKMVNEAEARVILALVEILIAGGVQCEEIA 1086
Query: 1243 IITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
I++P+ +Q + + + + VE+ TID+YQGRD+ + +SFVR + + R LL
Sbjct: 1087 IVSPFRAQVSRLEKLVWGRGFTQVEVCTIDRYQGRDRGVVFISFVRCNASGR--VGELLS 1144
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVP-LLKLLINKVGE 1339
D R+NVALTRAK++L++VGS +TL +L LI+ VG+
Sbjct: 1145 DRRRLNVALTRAKQRLVLVGSMQTLEHADGILPGLIDLVGQ 1185
>gi|366992642|ref|XP_003676086.1| hypothetical protein NCAS_0D01420 [Naumovozyma castellii CBS 4309]
gi|342301952|emb|CCC69723.1| hypothetical protein NCAS_0D01420 [Naumovozyma castellii CBS 4309]
Length = 1301
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 322/1048 (30%), Positives = 546/1048 (52%), Gaps = 143/1048 (13%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVI--GEF--------DDQGKCDVGRENNFLIVH 448
+++G+ +V + W + GD +++I F D+ K +G +N LI++
Sbjct: 231 DENGDNSSVIVRNPWVYLKFERGDVIHIIEGKNFENKRLLSNDENPKTRLGNDNL-LILN 289
Query: 449 PDVLVSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQI----FQAGLMKEIP 502
PD+L+S T V +S C RR V+ K S E SI +G ++H++ F+ L +
Sbjct: 290 PDLLLSATSVGSSMECLRRGVIQAIFKDSRGEPSIVMTIGNIVHELLQDSFKYMLTHQNL 349
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA-IPKMLNWIILFKDSQDLNTPTV 561
TM ++EE +L+ + C + D+ K ++E +P + ++ F +
Sbjct: 350 TMGYIEEKLDSLLKSFSFDILICNQSTADVRKQIMEEHVPNISEFVNQFISKNNYGRYVS 409
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
G + L IS+V DIEE W+ YGLKG +DA++ VK+E + I P E KTG
Sbjct: 410 VSGLRKTQPLSISDVIDIEENIWSSIYGLKGYLDATVEVKVEMGKT-----IAPFEVKTG 464
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
K S+ H AQ ++YTLL++++Y ID LLYY + + ++M R
Sbjct: 465 KF----RSVAHEAQGLIYTLLLNDKYEIPIDFFLLYYTRDKTMTKYPGSLHSVKHVLMLR 520
Query: 682 NEFANDI------IKAS--TTQQLPPMLRA-------------------YGGNKECSGLG 714
N+ A+++ IK + +LPP++ + G SGL
Sbjct: 521 NQMASNLKHQLHEIKTTDKIKMELPPLVGSSICDNCYVKEMCMVLNKLVEDGTSSESGLR 580
Query: 715 ----NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLS 769
+H+ + F ++ LI E + + N+++ G CLS
Sbjct: 581 PGEYEALTNHLLKNIDRYRQFFLKFNDLITKEESSISSINNKLFLLDSKTRELEDGRCLS 640
Query: 770 SIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDY 829
++++D E + R+ ++Y F R + +D S++ + L + D+
Sbjct: 641 NLIIDEITEQEN--REGSYIYMFRRHDV------TNDARSMLHSQ---------LSANDF 683
Query: 830 VILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSD----------------A 873
V++S E ++ G++ I +++VS + L L R +S++ +
Sbjct: 684 VLISDEEGHFCLSQGIVVSIGTDYINVSLKRKL-LNNRITSTEDKKISIQSVVNPSLDVS 742
Query: 874 DSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSAQS--------------------- 909
D+LL + +RIDK+E+ S S+ R+N++ LFL + +
Sbjct: 743 DTLLTQNLVTYRIDKNELQQSLSLARFNILNLFLPAVSTGDVVIDENTGETRILKGSEGG 802
Query: 910 -SQLRRMIVDLEAPRFDSGSVFSQDPALSY-IWSEKSLNDDQRRAIIKVLTAKDYALILG 967
+++R +VD +P+F + + P +SY + + +N DQ +AI V+ A+DYALILG
Sbjct: 803 DARMRDFLVDNVSPKFVPDN---EPPIISYQKYKDTRMNTDQLKAIDHVMRAEDYALILG 859
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKE 1027
MPG+GKT+ + +K L+ +G SILLTSYT+SAVDN+L+KL +I+ +R+G H +
Sbjct: 860 MPGSGKTTVIAEIIKILVSQGKSILLTSYTHSAVDNILLKLNELNINIMRLGSPHKTHAQ 919
Query: 1028 IQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLP 1085
+++ + +I + +E + ++ V VVA TCLGI + L T +K FD I+DEA Q ++P
Sbjct: 920 TRQYLPNYDSIKTYDEFLEMINNVSVVATTCLGIQDVLFTLRKKDFDYVILDEASQISIP 979
Query: 1086 VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM 1145
V+LGPL F +KF++VGDHYQLPPL+++ AR G+E SLF+ E PQ++ L QYRM
Sbjct: 980 VALGPLRFGNKFIMVGDHYQLPPLIKNEAARIGGLEESLFKVFCERQPQSVIELTYQYRM 1039
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS---------PWLKEALNPCRPV 1196
C I+ LSN LIY ++L CG++E+ N K+ + + + WL + L+P + V
Sbjct: 1040 CGDIVTLSNLLIYENKLKCGTEEVFNQKMIIPQIEPLTHFKENKKSQSWLTDILDPKKKV 1099
Query: 1197 IFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
+F++ D + E + + N E ++ + + +++ + ++IG++T Y +Q L++
Sbjct: 1100 LFLDYDNCTSICEQYESDNVTNMGENEIVRQCVEGMLQCGVSSENIGVMTLYRAQLRLLQ 1159
Query: 1256 ---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+S+ +EI T D++QGRDKDCI++S VRS N + SLL + R+NVA+TRAK
Sbjct: 1160 KTFNSMYFQGLEILTADQFQGRDKDCIIISMVRS--NSQLNGGSLLKELRRVNVAMTRAK 1217
Query: 1313 KKLIMVGSCRTLSKV----PLLKLLINK 1336
KLI+VGS +T+ + PL+ LL +K
Sbjct: 1218 SKLIIVGSKKTICNISEIKPLMTLLEDK 1245
>gi|390595320|gb|EIN04726.1| Dna2-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1162
Score = 448 bits (1152), Expect = e-122, Method: Compositional matrix adjust.
Identities = 332/1038 (31%), Positives = 503/1038 (48%), Gaps = 179/1038 (17%)
Query: 401 SGEERAVHLWEDWFHTVIAPGDTVNVIGEF--DDQG--KCDVGRENNFLIVHPDVLVSGT 456
S +R V L +DW T + GD VNV+G F D G D+ +NN +I HPD+L++ T
Sbjct: 142 STTQRRVVLHDDWAWTELEKGDVVNVLGSFKSDASGILSVDITSKNNIIIAHPDLLLTAT 201
Query: 457 RVAASFSCPRRSVLDERLKC----SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYAR 512
++ + C R+ +L ++ S S S + G +LH++ Q+ L + F+
Sbjct: 202 ALSNASQCRRKPLLSSLIRQASSESGASPSLVWGNMLHEVVQSCLKEGRWDEGFISSLIN 261
Query: 513 LVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLN----WIILF-----------KDSQD 555
V++ + SL G + VEA K LN I +F +D+
Sbjct: 262 GVVRTPSGLSSLVTIGCD--------VEAAKKELNARAVGIKVFGERYIQQGNPREDAVL 313
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASI-------------RVKI 602
+NT + G L L I+ + D+EE W+P++GLKG IDAS+ + K+
Sbjct: 314 VNTRAKN-GQKSL--LAITALHDVEEDMWSPRWGLKGKIDASVQGVVEERTESPFTKTKM 370
Query: 603 ESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSD 662
+ + + P E KTG+ G MEHRAQ +LYTLLMSER + ++SGLLYY QS+
Sbjct: 371 VASASTMTSSPFPFEIKTGRNVAG---MEHRAQTMLYTLLMSER--RAVESGLLYYTQSE 425
Query: 663 QTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ------------LPPMLRAYGGNKEC 710
+ V R+++ L+ RNE A + K + ++ LP + K C
Sbjct: 426 EVVRVPAGRAEIRALLSVRNELAGWMDKRAKAKERDVVQIEDAARFLPETIDDERICKRC 485
Query: 711 --------------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVK 750
S + +++ HLT +H F + W++LI LE +++ K
Sbjct: 486 YVSDACMLYRRAVEDIEDVSSPIADIYFEKTGHLTVSHREFFKKWEQLISLEERDIVRFK 545
Query: 751 NEIWCSRGSGGNHFTGCLSSIVLDASN---EHQKSYRDNRFVYHFVRQHMPSPNLNASDG 807
E+W C + +VLD + Q +R ++F Y FV+Q G
Sbjct: 546 KELWIMGAREREARGRCFADMVLDHAYVPPAAQAHHRIHQFTYRFVKQ----------GG 595
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL---RL 864
++ A++ M GD V +S E LA++ G I E++ V + L R+
Sbjct: 596 ETDEAASLLNGHMGV----GDAVTISVEPHLLALSRGFIVELTPTEVILGVDHELHLGRI 651
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF 924
R + D L +RID+DE+ S +R NL LF Q +L ++VDL+ P+F
Sbjct: 652 AARTRTPTPDVL----FRIDRDELFGGMSRVRDNLAHLFYQDGDKRRLG-LVVDLKTPQF 706
Query: 925 D----SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
D + +Y + + +N +QR A+ KV+ A+DYALILGMPGTGKT+ +V
Sbjct: 707 DWPDVEEDDEVEVLDDAYAKALEGMNPNQREAMDKVMAAQDYALILGMPGTGKTTVIVAL 766
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-IN 1039
+K L+ RG ++LLTSYT+SAVD +L+KL +R+G + VH+++ K L+A N
Sbjct: 767 IKELVRRGKTVLLTSYTHSAVDTILLKLLDAEFGILRLGNVDKVHRDVHKFTLAARKEAN 826
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
SVEE++K++ VVA TCL I FDV
Sbjct: 827 SVEELEKQMMTPPVVATTCLSIEQSDAKKGGFDV-------------------------- 860
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
SLFRRLS+ HP A++ L QYRM + IM LSN LIY
Sbjct: 861 -----------------------SLFRRLSDAHPHAVTDLAFQYRMNEDIMTLSNKLIYS 897
Query: 1160 DRLSCGSDEIAN--------AKIKVSDLSSC---SPWLKEALNPCRPVIFVNTDMLPAYE 1208
DRL CGS E+A ++ SSC + W++ L +FV+TD++PA +
Sbjct: 898 DRLRCGSKEVAKRALILPRREQLTAMHKSSCGNSTCWIEHLLAESCKAVFVDTDLVPARD 957
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-VSSVEIHT 1267
+K + N VEA L+ + + L+ + IG+I+ Y Q L+ H L S +EI T
Sbjct: 958 SKVGDLVQNEVEAELVYQTVRSLLAGGVREDQIGVISLYRQQIKLLSHLLQDHSGIEILT 1017
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
D+ QGRDKDCI++S V+S+E+ L+ DW R+NV++TRA+ KLI+ GS TL
Sbjct: 1018 ADRSQGRDKDCIIISMVKSNES--GAVGELVKDWRRVNVSVTRARSKLIIFGSRSTLQSA 1075
Query: 1328 PLLKLLINKVGEQSGILN 1345
PLL + ++ I N
Sbjct: 1076 PLLNEFFMLMADRKWIYN 1093
>gi|50289833|ref|XP_447348.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526658|emb|CAG60285.1| unnamed protein product [Candida glabrata]
Length = 1512
Score = 446 bits (1148), Expect = e-122, Method: Compositional matrix adjust.
Identities = 341/1120 (30%), Positives = 556/1120 (49%), Gaps = 174/1120 (15%)
Query: 329 EAYLSKSQDKNGAGMLLEANSVVNGVPTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAK 388
EA KS+DK+G +++ + P ++ L++ +SE N +D
Sbjct: 380 EAISYKSKDKSGYNSRIDST-----ILHMPSWVIHKKGFQRLLIISISEMN-----LDKI 429
Query: 389 SPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGK-CDVGR------- 440
K+L + E S +V + W + GD +++I +GK C R
Sbjct: 430 GRQKIL-ICKESSSSTCSVIVRHPWVYLDFKEGDIIHII-----EGKNCANKRLLSSDVD 483
Query: 441 ------ENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSER-SISALLGTLLHQI 492
+N LI++PD+L+S T V S CPR+++L+E + C E S+ L+G ++H++
Sbjct: 484 PVTQKVNDNLLILNPDILLSATMVGTSIDCPRKALLNEFFQDCREEPSLPILIGNIVHEL 543
Query: 493 FQAGLMKEIPTMKFLEEYARLVLQKNIE----SLYACGVNENDIHKTLVEA-IPKMLNWI 547
Q K++ EY + L ++ S+ CG N++ + ++E + ++
Sbjct: 544 LQEAFRKKVTDNSITLEYMQSKLNDLLDGFHFSIVLCGENKDSVKTKIMEDHFSNIFEFV 603
Query: 548 ILF--KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK 605
+ K S P G+ + + IS+V DIEE +P YG KG +DAS+ +E
Sbjct: 604 KKYVSKSSYGCYVPVS--GTRRTEPISISDVIDIEENIVSPMYGFKGFLDASVEALVERN 661
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
R I+PLE KTGK S+ H AQ ++YTLL+ +RY +D LLYY + D+T
Sbjct: 662 R-----FIVPLEIKTGK----SRSIAHEAQGLIYTLLLKDRYEMEVDFYLLYYTR-DKTM 711
Query: 666 GVMVQR-SDLVGLIMRRNEFANDI--------IKASTTQQLPPML-RAYGGN-------- 707
Q S + ++M RN+ + +K +LPP+L ++ N
Sbjct: 712 NKFPQNISSIKHVLMARNQLTTYLKHYLSEISVKEIQNLKLPPVLGNSFCDNCYLKDICD 771
Query: 708 -------------KECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW 754
K+CS GN S + + F ++ LI E + + +E++
Sbjct: 772 VVEQLTSDISFDSKKCSA-GNE-SSLTRQFSESQKKFFIKYNDLITKEESSYKCLSHELF 829
Query: 755 CSRGSGGNHFTG-CLSSIVLDASNEHQKSYRDNR-----FVYHFVRQHMPSPNLNASDGD 808
+G CLS++V+ KSY ++ FV F R + SP
Sbjct: 830 LMDSIDREKDSGKCLSNLVV-------KSYENSLTGRYPFVITFKRSY-SSP-------- 873
Query: 809 SLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR----- 863
IG + L D+V++S E ++ G++ + ++V+ ++ L
Sbjct: 874 --IGPFF----LSSQLTRDDHVLISDEGGHFGLSQGIVISVEDMEITVAVNRKLLNNNIS 927
Query: 864 ---------LPGRNSSSDADSLLHE----VWRIDKDEIMTSFSVMRYNLVQLF------- 903
+ ++S D ++LL +RIDK++I S+ RYNL+ LF
Sbjct: 928 EGDTGTKRVISALHTSLDTNALLSTQNQITYRIDKNDIQQGLSMARYNLLNLFNTPIQEP 987
Query: 904 -------------LQSAQSSQL--RRMIVDLEAPRFDSGSVFSQDPALSY-IWSEKSLND 947
L+S++ + R ++VD P+F + S + P + Y + N
Sbjct: 988 IIIKDPLTQKDRALKSSEGGDIKTRLLLVDGIPPKFRASS---KSPMVPYNPGTLTKFNV 1044
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
DQ+ AI KV+ A+DY LILGMPGTGKT+ + + L+ S+LLTSYT+SAVDN+++K
Sbjct: 1045 DQKAAIDKVMRAEDYCLILGMPGTGKTTVIAEIIHILVKNNKSVLLTSYTHSAVDNIMLK 1104
Query: 1008 LKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
LK+ + R+G +H EI + I ++++ + +D + VVA TCLGI + +L+
Sbjct: 1105 LKNYNTKMCRLGSRSKIHSEIIPYIPDYSTIKTLDDYVEFIDNIPVVATTCLGIRDTMLS 1164
Query: 1068 --DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
K FD I+DEA Q LP++LGPL FA KF++VGDH QLPPLV+S AR G+E S+F
Sbjct: 1165 MRTKDFDYVIIDEASQIALPIALGPLRFADKFIMVGDHLQLPPLVKSESARVGGLEDSMF 1224
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-------- 1177
+ L E P+A+ L QYRMC I++LSN LIY +L CG++E+A ++ ++
Sbjct: 1225 KILCERFPEALCELTFQYRMCDEIVKLSNHLIYDGKLRCGNEEVAVQQLGINTDNLAAYI 1284
Query: 1178 --DLSSCSPWLKEALNPCRPVIFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKN 1234
+LS+ S WL+ L+P V+F+N D + E+ + + N E L + + ++++
Sbjct: 1285 NPNLSADSCWLESVLSPKNKVLFLNYDASKSITESAEKDNITNAGEIELTRQCIEGMIES 1344
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+ K IG++T Y +Q ++ +EI T D++QGRDK+CI++S VRS N +
Sbjct: 1345 GVALKSIGVMTLYRAQLRALKKEFENQRYDGLEILTADQFQGRDKECIIISMVRS--NAQ 1402
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
SLL + R+NVA+TRAK KLI++GS T+ V +K
Sbjct: 1403 FNGGSLLKELRRVNVAMTRAKSKLIIIGSRNTIGSVNEMK 1442
>gi|393220196|gb|EJD05682.1| Dna2-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1181
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 349/1057 (33%), Positives = 520/1057 (49%), Gaps = 182/1057 (17%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGK-CDVGRENNFLIVHPD 450
K L +++E+ + R V L +DW T ++ GDT++VIG F + + + + N LI HPD
Sbjct: 135 KKLLVVSEKESKCRTVTLKDDWIQTDVSTGDTIHVIGVFTPRDEDITISAKRNLLIQHPD 194
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
VL++ T +A + C RRS+L ++ S ++ S + G +LH++ Q L + +E
Sbjct: 195 VLMTSTSIAGAPHCARRSLLSLLMRSSSGKTRSLVWGNILHEVMQRCLSSQRWDAPSIEA 254
Query: 510 YARLVLQKNIESLYA--CGVNENDIH------------KTLVEAIPKMLNWIILFKDSQD 555
+ +QK + L GV E I + + +PK ++ +D
Sbjct: 255 FIDETIQKGLTELVHIDVGVEEARIEINKRAGGLKAFGERFLGEVPKANAYLSNTRD--- 311
Query: 556 LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEIN----- 610
G + +L I+ + D+EE WAPKYGLKG +DA+++V+I+ + +N
Sbjct: 312 --------GQGKVSRLAITHLHDVEEEIWAPKYGLKGKLDATVQVRIDEETKGLNLKHGQ 363
Query: 611 --------GMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDS--------- 653
+PLE KTG+ G MEHRAQ +LYTLLM+ERY + S
Sbjct: 364 LPLPSQTITTTMPLEIKTGRAIAG---MEHRAQTMLYTLLMAERYGTPLPSPISGSSCHG 420
Query: 654 ----GLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII-------------------- 689
GLL+Y QS++ V ++L GLIM RNE AN ++
Sbjct: 421 SPPGGLLFYTQSEEVIRVPPGWNELRGLIMARNELANYLMRRSRRRKKSFEEANSKESMH 480
Query: 690 --KASTTQQLPPML---RAYGG----------NKECSGLGNMFD--SHIYHLTTAHCS-- 730
K + LPP + RA G K G+ + + + +Y L T H S
Sbjct: 481 EEKPAEVPFLPPTIDQERACGRCYVADACMLYRKAVEGVKDNYSPIAALYELKTGHLSEN 540
Query: 731 ---FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDAS---NEHQKSYR 784
F + W+ LI LE ++M + EIW + CL+ +VLD + Q + R
Sbjct: 541 QLMFFKQWENLISLEEQDMTRFRKEIWTLGATEREKSGRCLADMVLDPTFDATSAQDNAR 600
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD-RL-AVA 842
+R+ Y F R+ SP++ D S ++ + + SG+ V++S D RL A+A
Sbjct: 601 IHRYTYRFTRRPR-SPSV-LKDASSSSSPSL----LHGHVTSGEPVVISVLGDPRLVALA 654
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--VWRIDKDEIMTSFSVMRYNLV 900
G + +++ + V L PG S + L E +RIDKD+++ +R NL
Sbjct: 655 RGYVLDLNPESIVVGCDHSLS-PGSLKSWSSFPLAQEDIAFRIDKDDLLGGMGRVRDNLA 713
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
QLF S+ +L IVDL+ P FD+ D AL LN Q+ A+ L A+
Sbjct: 714 QLFYVSS-PRRLLEQIVDLKPPEFDAECHIPMDAALD------GLNACQQHALEHCLRAR 766
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK-SQSIDFVRIG 1019
DYALILGMPGTGKT+T+ H +K L+ G ++LLTSYT+SAVD +L+KLK + +R+G
Sbjct: 767 DYALILGMPGTGKTTTVAHMIKVLVEMGKTVLLTSYTHSAVDTILLKLKETAKFGILRLG 826
Query: 1020 RHEVVHKEIQKHCLSA-MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ VH +Q+ L+A +VE+++ +L + VVA T L TD K
Sbjct: 827 NKDKVHPNVQEFTLNAGERATTVEQLEHQLLRPPVVAATALS------TDHK-------- 872
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
EAR+ G ++SLFRRLS HP A+
Sbjct: 873 -----------------------------------EARKGGFDVSLFRRLSSAHPTAVVD 897
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL----SSCSP-----WLKEA 1189
L QYRM IM LSN LIY DRL CGS EIA+ + + + SCS W++
Sbjct: 898 LTYQYRMNANIMLLSNKLIYSDRLKCGSAEIADQSLVIPNAVEHGRSCSTNDSSCWIQTI 957
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
++ IFV+TD LPA +++ + N VEA L+ ++T L+ + + IGII+ Y
Sbjct: 958 IDESCKAIFVDTDALPALDSRVGDLVQNEVEASLVQQLTLALLNGGVREEQIGIISLYRQ 1017
Query: 1250 QANLI-RHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
Q L+ R L +EI T D+ QGRDKDCI++S VR++E N LL DW RINVA
Sbjct: 1018 QIKLLSRLLLDNKGIEILTADRSQGRDKDCIIISLVRANEE--NQIGDLLKDWRRINVAF 1075
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
TRA+ KL++ GS +TL PLL + E+ +L
Sbjct: 1076 TRARAKLVIFGSRKTLKASPLLSDFFGLMEERGWVLT 1112
>gi|366998597|ref|XP_003684035.1| hypothetical protein TPHA_0A05270 [Tetrapisispora phaffii CBS 4417]
gi|357522330|emb|CCE61601.1| hypothetical protein TPHA_0A05270 [Tetrapisispora phaffii CBS 4417]
Length = 1526
Score = 444 bits (1142), Expect = e-121, Method: Compositional matrix adjust.
Identities = 309/1040 (29%), Positives = 520/1040 (50%), Gaps = 125/1040 (12%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE---------N 442
K+L+ +N SGE +V L W + + GD +++I + + K + + +
Sbjct: 452 KILKSIN-SSGELTSVILRHPWVYLDVEDGDVIHIIEGINSKNKMLLSDDKDPQTQKPND 510
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISA---LLGTLLHQIFQAGLMK 499
N L+V+PD+L+S T + S C RR+V+ + + R + + L+G ++H++ Q L
Sbjct: 511 NLLVVNPDILLSATTIGTSLDCFRRAVIQSQFQ-DYRGVPSKVMLIGNIVHELLQEALKH 569
Query: 500 EIPTMK----FLEEYARLVLQKNIESLYACGVNENDIH-KTLVEAIPKMLNWIILFKDSQ 554
++ + FLE +L+ N + C + ++ + L E + + +++ F S+
Sbjct: 570 KLNYLTLESTFLETTLDSILESNRFGIITCNSSVEELKAQILEEQVENIKDFVNKFVKSK 629
Query: 555 DLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL 614
GS + IS + DIEE W+P YGLKG +DA++ VKI + +
Sbjct: 630 PNTASVCTSGSRKKTFMSISNIIDIEENIWSPNYGLKGYLDATLEVKINGQY-----FLT 684
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
PLE KTGK + Q+S H AQ + YT L+++RY +D LL Y + + +
Sbjct: 685 PLEIKTGK--SKQNS--HEAQGLTYTFLLNDRYELPVDFFLLLYTRYNDISKYDKILHSV 740
Query: 675 VGLIMRRNEFANDI------IKASTTQ--QLPPMLRAYGGN-----KECSGLGNMFDSHI 721
+ M RN+ AN + IK + +LPP+LR + +EC L + + I
Sbjct: 741 RHVFMLRNQMANKLKYQLNEIKDMSVNDMELPPILRGSVCDNCFVKQECITLHKLSKTEI 800
Query: 722 Y---------------HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG-------S 759
Y HL + + + DL KE + +W +
Sbjct: 801 YDNNDFRDGEYDTLTGHLLENEIKYREFFKKYYDLLRKEESSM---LWMNSSLFLIDSQR 857
Query: 760 GGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKD 819
F CLS++ + + +D R++Y F + +N D L +
Sbjct: 858 KEAEFGNCLSNLSISKCTKDDD--QDGRYLYEFTK-------MNTEHSDHLFSNFSKNEP 908
Query: 820 MDCTLRSGDYVI----LSTESDRLAVASG----LITEISRFHVSVSFSKPLRLPGRNSSS 871
+ + G++VI +++ SD L S L + + + ++ + LP +S++
Sbjct: 909 VFISDEEGNFVICQGSVASVSDTLITISTKRSILYNKTKKNQGNAGLARSVLLPNNSSAA 968
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQL------------------- 912
D +RIDK+EI S++RYNL+ LFL S +
Sbjct: 969 LLDIQNLVKYRIDKNEIKYGLSMVRYNLLNLFLPPVSKSDIVIDELTGKERLLKASEGGD 1028
Query: 913 ---RRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS-LNDDQRRAIIKVLTAKDYALILGM 968
R+ IVD PRF + + P + Y + S N+DQ +AI + A+DYAL+LGM
Sbjct: 1029 YNTRKFIVDGVEPRFRKNT---EQPIIQYEQPKDSTFNNDQLKAIDMITRAEDYALVLGM 1085
Query: 969 PGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI 1028
PGTGKT+ + ++ ++ G ++LLTSYT+SAVDN+L+K+ + + +R+G + +H +
Sbjct: 1086 PGTGKTTLIAEIIRHIVGNGKTVLLTSYTHSAVDNVLLKINTLESNIIRLGSKKRIHPGV 1145
Query: 1029 QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPL--LTDKKFDVCIMDEAGQTTLPV 1086
K+ S NI++ EE ++ +V TCLGIT+ + L ++ FD I+DEA Q +LPV
Sbjct: 1146 HKYIPSYDNISNFEEYSNLINNASLVGTTCLGITDIMFSLKERDFDYVILDEASQVSLPV 1205
Query: 1087 SLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
+LGPL + SKF+++GDH+QLPPL+ + AR+ G+++S F+ L E+HP + L QYRMC
Sbjct: 1206 ALGPLRYGSKFIMIGDHFQLPPLIINEAARKGGLDVSPFQILCEKHPANVIYLTYQYRMC 1265
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC--------SPWLKEALNPCRPVIF 1198
+ I +LSN+++Y +L CG+D + + + + SS PWL L V+
Sbjct: 1266 EDIAKLSNSMMYDGQLKCGTDAVRTQTLNIPNSSSVHKFYKEKSHPWLDHVLKEQNRVLL 1325
Query: 1199 VNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
+N D A E ++ + N EA L + L++ + +IG+++ Y Q N ++
Sbjct: 1326 LNYDRCEAISETVENNNIKNLGEAQLTYDCVRCLIETGVPVSEIGVMSLYRGQINCLQDI 1385
Query: 1258 LS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
L+ +EI T D++QGRDK CI++S VRS N + SL+ + RINVA+TRA+ K
Sbjct: 1386 LTREMSKGLEILTADQFQGRDKKCIIISLVRS--NKEQNSGSLMKEMRRINVAMTRARSK 1443
Query: 1315 LIMVGSCRTLSKVPLLKLLI 1334
LI++GS + + V L+ +
Sbjct: 1444 LIIIGSKKMIKSVKQLEHFV 1463
>gi|351702489|gb|EHB05408.1| DNA2-like helicase [Heterocephalus glaber]
Length = 1000
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 333/999 (33%), Positives = 492/999 (49%), Gaps = 181/999 (18%)
Query: 409 LWEDWFHTVIAPGDTVNVIGE--FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPR 466
L DW + PGD +++ G+ FD + ++ FLI++PD+L+SGT +A+S C R
Sbjct: 81 LRNDWCSVPVQPGDIIHLEGDCSFDTW---IIDKDFGFLILYPDMLISGTSIASSIRCMR 137
Query: 467 RSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLY 523
R+VL E + S+++ L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 138 RAVLSETFRSSDQATRQMLMGTVLHEVFQKAISDSFAPEK-LKELAFQTVQEIRHLKEMY 196
Query: 524 ACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISE 575
+++++I + E +P W F S D + SDG +++
Sbjct: 197 RLNLSQDEIKQEAEEYLPSFSKWAGDFMRKSASADFPQMQLSLPSDGSNNNSTCSIEVVS 256
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
DIEE W+P++G+KG ID ++ VKI + + I+PLE KTGK N S+EHR Q
Sbjct: 257 SLDIEESIWSPRFGMKGKIDVTVGVKIH-RGCKAKYKIMPLELKTGKESN---SIEHRGQ 312
Query: 636 VILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----KA 691
V+LYTLL ER ++GLL YL++ Q V + D L+ RN+ A ++ K+
Sbjct: 313 VVLYTLLSQERRADP-EAGLLLYLKTGQMYPVAAKHLDKRELLKLRNQMAFSLLHRTSKS 371
Query: 692 STTQQ------LPPMLRAYGGNKECSGLGN-----------MFDSHI------------Y 722
+T ++ LP ++ K CS + N M D +
Sbjct: 372 ATGKEKTQLASLPQIIEEEKICKYCSQMNNCALYSRAVEQQMEDVSVPVVMLPRIKEATK 431
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQ 780
HL H + W ++ LE++ +N IW S C+ ++ E
Sbjct: 432 HLKLTHLQYFSVWCLMLTLESQSKDSRRNHQNIWLMSASEMEESGSCIGYLI---RTECV 488
Query: 781 KSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
+ D +++++F R+H MP NL A GD +ILS E
Sbjct: 489 QRVCDGQYIHNFQRKHGAMPVTNLMA----------------------GDRIILSGEDRT 526
Query: 839 L-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
L A++ G + EI+ ++ L RN S +S L +R+D++E
Sbjct: 527 LFALSRGYVKEINMTTITC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLG 576
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F SV D + K LN QR+A+ K
Sbjct: 577 NLSKLMENTQASKKLRDLIIDFREPQFIPYLSSVLPHDAKDTVASILKGLNKPQRQAMKK 636
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 637 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 696
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 697 LRLGQTQKVHPDIQKFTEEEICRSK-SIKSLAVLEELYNSQLIVATTCMGINHPIFSRKT 755
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EA +
Sbjct: 756 FDFCIVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLVLNREASK------------- 802
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
IM LSN L Y +L CGSD +A+ I + +
Sbjct: 803 ------------------IMSLSNELTYEGKLECGSDRVASGVISLPNFKDVKLELELYA 844
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S S WL P PV F+NTD + NP
Sbjct: 845 DYSDSLWLNGVFEPNNPVCFLNTD----------KAGCNP-------------------- 874
Query: 1239 KDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
DIGII PY Q +I L+ SS VE++T+DKYQGRDK ILVSFVRS++N
Sbjct: 875 SDIGIIAPYRQQLKIISDLLTRSSFGMVEVNTVDKYQGRDKRIILVSFVRSNKN--GTLG 932
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LL DW R+NVA+TRAK KLI++G +L + P L+ L
Sbjct: 933 ELLKDWRRLNVAITRAKHKLILLGCVPSLKRYPPLEKLF 971
>gi|342319237|gb|EGU11187.1| DNA replication helicase Dna2, putative [Rhodotorula glutinis ATCC
204091]
Length = 1334
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/639 (40%), Positives = 368/639 (57%), Gaps = 37/639 (5%)
Query: 707 NKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG 766
+ E L ++ H+T AH +F +HW+RLI LE +E+ K EIW +
Sbjct: 669 DDETDPLQLIYAGKTDHITPAHANFFKHWERLISLEEQELVRFKKEIWTLQAEEREQLGR 728
Query: 767 CLSSIVLDASNEHQKSYRDN--RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTL 824
C +++V+ S + + RFVY + P SL+G +I T D
Sbjct: 729 CFANMVISEVKAEDLSSKTSVHRFVYRLRPRSPPD--------SSLLGGSISTNDP---- 776
Query: 825 RSGDYVILSTESDR-LAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRI 883
V++S E+ LA++ G + +S + + + L + + A+ L V+R+
Sbjct: 777 -----VVVSLETPSILAISRGFVLSLSPVDLVIGVDRSLTACPQTKGAAANEL---VFRV 828
Query: 884 DKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
DKDE+ +R NLVQLF A + + R ++VDL APRF Q S+
Sbjct: 829 DKDELAAGMGRIRDNLVQLFTPGADARR-RSLVVDLAAPRFRPVEEIKQAGLPSH----- 882
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
LNDDQR+A+ KVLTA+DYALILGMPGTGKT+T +KAL G SILLTSYT+SAVDN
Sbjct: 883 -LNDDQRQAVAKVLTAQDYALILGMPGTGKTTTTAEIIKALAQAGKSILLTSYTHSAVDN 941
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-INSVEEIKKRLDQVKVVAVTCLGIT 1062
+L+K+K + +R+G + V + + LS+ + +S+ +I +L + ++VA TCLGI
Sbjct: 942 ILLKVKDAGLSILRLGNRDKVLPSLHPYTLSSEDYAHSLSDIDNKLLRPQIVATTCLGIN 1001
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
P+ ++FDVCI+DEA Q TLP LGPL FA FVLVGDH QLPPLV++ AR+ G+++
Sbjct: 1002 EPIFVKRRFDVCIVDEASQVTLPTCLGPLRFADSFVLVGDHNQLPPLVRNGAARKGGLDV 1061
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-SDL-- 1179
SLF+RLS+ HP A+ L QYRM IM LSN L+Y +L G + + K+ V DL
Sbjct: 1062 SLFKRLSDAHPNAVVNLTHQYRMNSDIMSLSNELVYSGQLKVGDERVGGRKLGVRKDLAE 1121
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
S W+ + ++P R VIFV+TD LPA E ++ ++N EA L+ K L + ++ +
Sbjct: 1122 SVVESWVWDIIDPDRSVIFVDTDALPARERRNGSLIDNLSEAVLVTKTVSALAGSGVDEE 1181
Query: 1240 DIGIITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+IG+I+ Y Q L+ LS VEI T D+ QGRDK+CI++S VRS N LL
Sbjct: 1182 EIGVISLYRQQIKLLSRQLSSHPGVEILTADRSQGRDKECIVLSLVRS--NTSGNAGDLL 1239
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
DW RINV LTRAK KL++ GS T+S V L+ + V
Sbjct: 1240 KDWRRINVCLTRAKSKLVIFGSRSTISHVQLMADFVRLV 1278
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 165/312 (52%), Gaps = 26/312 (8%)
Query: 390 PYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGK---CDVGRENNFLI 446
P K+L + ++ + R V L +DW T + GD VN++G+FD K + R + LI
Sbjct: 266 PQKLLTVSSKAFDDLRQVALCDDWVDTPVVAGDIVNLVGDFDLAVKDTPLQLTRSHGLLI 325
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMK 505
+HPD+LVS T+VA S C R++VL E ++ S +LL G +LH + Q+ + + +
Sbjct: 326 LHPDILVSSTKVADSSHCTRKAVLQEIIRTVGGSTPSLLYGNMLHSLMQSCMTEG----R 381
Query: 506 FLEEYARLVLQKNIES----LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
+ +EY +++ ++ L+ V + L+ + + + F + P V
Sbjct: 382 WDDEYRHAKIEEVVKEYGGQLWTIDVGFEKAKEELLNRSKEFEAFAVRFVGEK----PKV 437
Query: 562 D-FGSD------GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL 614
D F SD +L I D+E+ W+P++GLKG ID S R +
Sbjct: 438 DAFLSDPRAVDTARSRLAIISTLDVEDDIWSPRFGLKGKIDVSTRANVVDSVGFSRKGTA 497
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
P E KTG+ G MEHRAQ +LYTLLMS+R+ + IDSGLLYY QS++ V R+++
Sbjct: 498 PFEIKTGRTNAG---MEHRAQTMLYTLLMSDRFDEDIDSGLLYYTQSNEVFRVQAARNEI 554
Query: 675 VGLIMRRNEFAN 686
GLI+ RN FA
Sbjct: 555 RGLILARNRFAT 566
>gi|388856197|emb|CCF50188.1| related to DNA2-DNA helicase [Ustilago hordei]
Length = 1441
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 339/1119 (30%), Positives = 520/1119 (46%), Gaps = 248/1119 (22%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGL--- 497
+N L+VHPDVLV T+VA SC R+ V+ +RL+ S+ ++S ++G +LH + Q L
Sbjct: 335 DNLLVVHPDVLVPATKVADVASCIRKPVVQDRLRGASDVTVSLVMGNMLHGLLQVCLTAS 394
Query: 498 ---------------------MKEIPTMK---------------FLEEYARLVLQKNIES 521
++ IP + F+E + ++ NIES
Sbjct: 395 TFQQCSEPSLHHDHDPPHGQAVEIIPAVSCWPEQWQGIGDFSRSFVESQVQEQVRSNIES 454
Query: 522 LYACGVNENDIHKTLVEAIPKMLNW--IILFKDSQDLNTPTVDF------GSDGLKKLKI 573
LYA ++ ++ L E ++ LFK++ P + K+++
Sbjct: 455 LYATELSADEAATQLREKAAPFAHFARTFLFKENDVPFHPEATLRESSRTAAATQAKVRL 514
Query: 574 SEVTDIEEMAWAPKYGLKGMIDASIRVKI------------------------------E 603
S + D+EE W+P +GLKG +D S+ I E
Sbjct: 515 SRILDVEEEIWSPVFGLKGKVDVSVECDILEGADSHPSNQNIPSSKQAFSRGKRKHAASE 574
Query: 604 SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQ 663
+ I ++PLE KTG+ S EHRAQ +LYTL+MS+RY + GLLYY +S +
Sbjct: 575 GQNQRITTSVVPLELKTGRAEV--ISTEHRAQTMLYTLMMSDRYGVTVSDGLLYYSKSGE 632
Query: 664 TQGVMVQRSDLVGLIMRRNEFAN------DIIKASTTQQ--------LPPML-------R 702
+ R+++ LI+ RNE A+ D ++ + ++ LPP + R
Sbjct: 633 LHRISRSRNEVRSLIIGRNELAHYLRHDTDRLRKAKFEEPEAESAPVLPPTIDSEHKCRR 692
Query: 703 AYG----------------------GNKECSGL--------------GNMFDSHIYHLTT 726
Y + E G+ ++++ HL
Sbjct: 693 CYAVDGCMLFRRAIEDVVEPSDVAVADIESKGMQKAGKVLLPRRTPIADVYEQKTEHLND 752
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWC----SRGSGGNHFTGCLSSIVLDASNEHQKS 782
H F R WDRL++LE ++ + E+W R G F IV D S+ S
Sbjct: 753 VHLDFFRKWDRLLNLEEEDAVRFRMEMWTMTAEQREKVGRCFGNMRLEIVPDTSSPG-PS 811
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG-----DYVILSTESD 837
+ V+ FVR H PT++ + L SG D V +S E D
Sbjct: 812 GSMRKVVHRFVRHH------------------DPTQEAEAGLLSGHITVNDPVTISIEPD 853
Query: 838 RLAVASGLITEISRFHVSVSFSKPLRLPGRNS-----------SSD-ADSLLHEVWRIDK 885
L+VA G + +++ V + L R + S D A + V+RIDK
Sbjct: 854 MLSVAQGFVAKLTPTAVEIGLDHSLDAALRRAWEKSRHRRQAQSFDLASAAEATVFRIDK 913
Query: 886 DEIMTSFSVMRYNLVQLFLQSAQSSQLRR--MIVDLEAPRF-------DSGSV----FSQ 932
DE+ + +R NL LFL + ++R ++V++ PRF D+ S S
Sbjct: 914 DELGSGMGRIRANLASLFLLPQKGGDIKRRELVVEMRPPRFLQPAQYEDAFSAPTPQMSV 973
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
++ + ++ S+N+DQ+ AI KVL+A+DYAL LGMPGTGKT+T+ ++ L+ G IL
Sbjct: 974 RDVVAQVKADPSVNEDQKLAIDKVLSAQDYALALGMPGTGKTTTIAKLIELLVKLGKRIL 1033
Query: 993 LTSYTNSAVDNLLIKLKSQSID----------FVRIGRHEVVHKEIQKHCLSAMNINSVE 1042
LTSYT+SAVD +L KL I +R+G + VH + ++ L ++E
Sbjct: 1034 LTSYTHSAVDTILRKLAEDQIKTEGGRQSEMRILRLGNKDKVHPDARQFLLP--RCTTLE 1091
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLL------------TDKK------FDVCIMDEAGQTTL 1084
E+K + VVA TCL + + TD FD CI+DEA Q L
Sbjct: 1092 ELKDAFESPNVVAATCLSVHHTFFSSGLAKLRGRADTDDTSVPAYLFDYCIVDEASQIPL 1151
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQY 1143
P LGPL FA KFVLVGDH+QLPPLV++ EA+ G+++SLF+ LS+ H +A+ AL+SQY
Sbjct: 1152 PTCLGPLRFADKFVLVGDHHQLPPLVKNAEAKAGGLDMSLFKLLSDRHGAEAMVALRSQY 1211
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC------SPWLKEALNPCRPVI 1197
RM IM+LSN L+Y L G+D + + +++ + + WL++ L P V
Sbjct: 1212 RMNDDIMKLSNELVYRGELRAGTDSVRDRVLELPNFQAALNYVGEDAWLQDMLRPESKVR 1271
Query: 1198 FVNTD---MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
F++T + E+K + + N EA L+ ++ LV + I ++TPY Q L+
Sbjct: 1272 FLDTSKRLLEQVGESKHGELVKNQFEAELVVRLAWALVAGGCKPDQIAVVTPYRQQIKLL 1331
Query: 1255 RHSLSVSS--------------VEIHTIDKYQGRDKDCILVSFVR----SSENPRNCTSS 1296
R L S +E+ T D+ QGRDKD ILV+F R ++ + T
Sbjct: 1332 RTLLLTQSQTQLTQARGEDLGEIELLTADQSQGRDKDVILVTFTRANFSTAMDAAGNTGE 1391
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
LL D R+NV LTRAKKKL+M+G TL ++K L++
Sbjct: 1392 LLNDLRRLNVTLTRAKKKLVMIGHSATLKSSTVIKPLLS 1430
>gi|302894621|ref|XP_003046191.1| hypothetical protein NECHADRAFT_76779 [Nectria haematococca mpVI
77-13-4]
gi|256727118|gb|EEU40478.1| hypothetical protein NECHADRAFT_76779 [Nectria haematococca mpVI
77-13-4]
Length = 1389
Score = 441 bits (1135), Expect = e-120, Method: Compositional matrix adjust.
Identities = 308/954 (32%), Positives = 472/954 (49%), Gaps = 161/954 (16%)
Query: 449 PDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFL 507
P+ L+S T VA SF C RR+VL +R+K + L+ GT+LH+IFQ L+ + FL
Sbjct: 426 PEKLISATVVADSFGCMRRAVLQDRVKATSPPTPPLIYGTMLHEIFQEALLANKWDLPFL 485
Query: 508 EEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDG 567
+ K++E LY V + L + ++ W F SQ ++ +
Sbjct: 486 CSVIDRITDKHVEDLYTIKVGLVSAREHLQSKMNELSYWAGAFVSSQPTEDAVIEDRNGK 545
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+ ++++ D+EE W+P YGLKG IDA++ V ++ ++ + +P E KTGK N
Sbjct: 546 KANMAVTKLLDVEEHVWSPMYGLKGNIDATVEVAMQDGKD-FKTLTVPFEVKTGKHANSN 604
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
H AQ LYTLL+S+RY I G+LYY+++ +T + R +L +IM+RN+ A
Sbjct: 605 ----HMAQTALYTLLLSDRYDIEIAYGILYYMETSKTMRIPAIRHELRHMIMQRNQLACY 660
Query: 688 IIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTTA 727
+ + S QLPPMLR A G+ E SG+ FD + HLT
Sbjct: 661 VRERSV--QLPPMLRSKHMCGKCYAKTSCFIYHRLADDGDGESSGMNEKFDELVKHLTPD 718
Query: 728 HCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY--RD 785
H F W+ L+ E KE Q K E+W + + C ++++ + + +
Sbjct: 719 HKEFFVKWENLLTKEEKESQKTKRELWTMTSAEREKKSRCFGDVIIEEGSASVDTVNPKI 778
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGL 845
NRF Y F++Q+ P+ D L + L G+ +++S E A+A G
Sbjct: 779 NRFHYTFIKQNHPA------DFSFL----------ESELSVGEPIVVSDEEGHFALAIGY 822
Query: 846 ITEISRFHVSVSFSKPL-----RLPG--RNSSSDADSLL---HE---------------- 879
+T + R +SV+ + L R PG N + S++ HE
Sbjct: 823 VTAVKRRRISVAVDRRLHNARIRQPGFDENDNQTFASIMEVAHEGATQDETHGKIKEPPI 882
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+R+D+DE + +R NLVQ+ S Q+RR+IVDL+ PRF S P
Sbjct: 883 RYRLDQDEFSNGMATVRNNLVQMMADDVFGSRQIRRLIVDLQPPRFKSV------PTQYT 936
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
I SLN DQ RAI KV++A+DYAL+LGMPGTGKT+T+ H ++AL +G S+LLTS+T+
Sbjct: 937 ISDRDSLNVDQHRAIEKVMSAQDYALVLGMPGTGKTTTIAHIIRALTSQGKSVLLTSHTH 996
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVT 1057
+AVDN+L+KLK ++I +R+G VH E+Q+ L+ + + +EIK
Sbjct: 997 TAVDNILLKLKGENIPILRLGAPAKVHPEVQEFAILAGQPMKTFDEIKD----------A 1046
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
G N L V +EA + L VSL
Sbjct: 1047 WHGDHNQLPP-----VVRNEEAREGGLDVSL----------------------------- 1072
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV- 1176
F+ LS+ HPQ++ L+ QYRMC+ IM LSN LIY +L CG++++ K+ +
Sbjct: 1073 -------FKLLSDTHPQSVVNLEHQYRMCEDIMTLSNTLIYNGKLRCGTEKLRKRKLNIP 1125
Query: 1177 ------------SDLSSCSP----------WLKEALNPCRPVIFVNTD-MLP-AYEAKDH 1212
S + +P WL + L V F+NTD +LP E
Sbjct: 1126 HMDALRQRHYDASTFHAATPRSFCAAPGRCWLYDLLESEARVRFINTDTILPQVREEAQG 1185
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKY 1271
+ + N E +++++ L+ + +IG++T Y +Q L++ L + VE+HT D++
Sbjct: 1186 KRIVNSAEVRIVSQLVDSLLTVGVPETEIGVMTHYRAQLFLLKEKLKGYAGVEMHTTDRF 1245
Query: 1272 QGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
QGRDK+ I++S VRS++ C LL DW RINVA TRAK KL+++GS TL
Sbjct: 1246 QGRDKEVIVLSLVRSND---ACNIGDLLKDWRRINVAFTRAKTKLLVIGSKMTL 1296
>gi|402219553|gb|EJT99626.1| Dna2-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 1251
Score = 440 bits (1131), Expect = e-120, Method: Compositional matrix adjust.
Identities = 314/1028 (30%), Positives = 485/1028 (47%), Gaps = 165/1028 (16%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEF--------DDQGKCDVGRENNFLIVHPDVLVSGTRVAA 460
L +DW + GDT+NV D V ++ HPDVL+ T V+
Sbjct: 227 LRDDWSFLPLHAGDTLNVHAPLLPPPSTHSPDLPTIVVSASQGMVVHHPDVLLPPTMVST 286
Query: 461 SFSCPRRSVLDERLKCSERSISA-----LLGTLLHQIFQAGLMKEIP---------TMKF 506
+ C R+ ++ L+ S + L G LLH++ Q + P T
Sbjct: 287 ASQCTRKPLVSALLRSSPQGGEGGAKVVLWGNLLHEVVQRCMTASAPPTSGAAHAWTPDL 346
Query: 507 LEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDF- 563
++ + R VL + +E + GV ++ L ++ + F ++ + +
Sbjct: 347 IDHHLRSVLYSRTGVEGCFRAGVTVDEALSELRRRSSGLIEFSKRFMRAEPSSDGVLKVD 406
Query: 564 GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKR-----------NEINGM 612
+G L + +EE W+P +GLKG +DAS++V + + + ++
Sbjct: 407 AQEGETWLALRRTRGVEEDVWSPSWGLKGKVDASVQVSLSTPKAGFFDSRTKGERQVRKG 466
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
+P E KTG+ G +EHRAQ +LYTLL+ ERY + I SGLLYY QS + V +R+
Sbjct: 467 TMPFEIKTGRPGRG---VEHRAQTMLYTLLLGERYEEEIPSGLLYYTQSAEVIQVSAKRN 523
Query: 673 DLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKE----------------------- 709
+L L+M RN+ A + + + + G+ E
Sbjct: 524 ELRALLMARNDLAEWTMGQNDGEAREQAIEVELGDVEEMAFLPEPLDDPWSCGKCYALDG 583
Query: 710 C-------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCS 756
C S + ++F H+++ +F R W+RL+ LE +M + E+W
Sbjct: 584 CMLYRRTHDPLPVPSDMEDLFVQKTSHISSRQATFFRTWERLVSLEENDMNRFRAELWTM 643
Query: 757 RGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
C + +V+ E K + + H G++L+ I
Sbjct: 644 TAQARESAGRCFADMVVIPLREEDKRFLEGDRKIHTHTARFVKRATITQRGETLLNGHIS 703
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
GD V++S + LA+A G + +S V + G + + D ++L
Sbjct: 704 V---------GDPVVVSADPGLLALARGFVLSLSPDAVVL---------GLDHAVDEEAL 745
Query: 877 --------LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGS 928
VWRIDKDE+ T S +R NL QLF S + R ++VDL+ P F S
Sbjct: 746 KELPIKDVADLVWRIDKDELSTGISRLRDNLAQLFYASGDERR-RSLVVDLDPPTFASNP 804
Query: 929 VFSQDPA-LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
F DP+ LS +LN QR AI KV AKDYALILGMPGTGKTST+ ++ L+ +
Sbjct: 805 AF--DPSELS-----SALNAPQRTAIAKVAAAKDYALILGMPGTGKTSTIAEIIRMLVRQ 857
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-NINSVEEIKK 1046
G S+LLTSYT+SAVD +L++L D +R+G + VH +++K+ L+A +V++++
Sbjct: 858 GKSVLLTSYTHSAVDTILLRLGEVDFDVLRLGNTDKVHPDLKKYTLAARPQATTVQQLEN 917
Query: 1047 RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
+L VVA TCL I +PL +K
Sbjct: 918 QLLLPPVVATTCLSIDHPLFARRK------------------------------------ 941
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
+ AR+ G+++SLFRRLS+ HP+A+ L QYRM + IM LSN LIY DRL CGS
Sbjct: 942 -----NRAARKGGLDVSLFRRLSDAHPEAVVDLTLQYRMNEDIMLLSNRLIYNDRLQCGS 996
Query: 1167 DEIANAKIKVSDLSSCSP----------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
+E A + + D S + WL+ L+ +FV+TD+LPA +++ +
Sbjct: 997 EETARRSLVLKDKSPLAALHTGGPCDGCWLEALLDERCKAVFVDTDLLPARDSRVGDLVQ 1056
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRD 1275
N +EA ++A++ L+ + DIGI++ Y Q LI H L S VEI T D+ QGRD
Sbjct: 1057 NEIEASIVAQLANVLIACGLRPMDIGILSLYRQQIKLISHLLRSAPGVEILTADRSQGRD 1116
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K+CIL+S VRS+E LL DW R+NV+ TRA+ KL++VGS TL L++ +
Sbjct: 1117 KECILISMVRSNET--GELGELLKDWRRLNVSFTRARSKLVIVGSRNTLGGTLLMREFFD 1174
Query: 1336 KVGEQSGI 1343
+ E+ I
Sbjct: 1175 LMTEKGWI 1182
>gi|147846001|emb|CAN84170.1| hypothetical protein VITISV_028525 [Vitis vinifera]
Length = 705
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 219/314 (69%), Positives = 262/314 (83%), Gaps = 2/314 (0%)
Query: 700 MLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGS 759
+L+A+GG+ E SGLG++FDS+I HLTT+H +FLRHWD LIDLEAKEM+V+K IW S
Sbjct: 8 LLKAHGGSMESSGLGDLFDSNINHLTTSHFAFLRHWDWLIDLEAKEMEVMKKGIWRSHSL 67
Query: 760 GGNHFTGCLSSIVLDASNEH--QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPT 817
+ T CLSSIVLD SN H + S++DN+F+Y FVRQ++PS ++ + DSL + P
Sbjct: 68 KRDPSTSCLSSIVLDTSNXHPQKNSFKDNKFIYRFVRQNVPSFHVKEHNEDSLPSVSSPA 127
Query: 818 KDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL 877
D+DCTLR+GDYVILSTES LA+ASG+IT+ISRFHV V FSK LRLP SS+ LL
Sbjct: 128 NDLDCTLRNGDYVILSTESGHLALASGVITDISRFHVYVCFSKRLRLPWSKRSSEEQDLL 187
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
EV+RIBKDEI+TSF+VMR+NL+QLFLQS QSS LR+MIVDLE PRFD G +FSQDPA+S
Sbjct: 188 GEVFRIBKDEIVTSFAVMRFNLIQLFLQSMQSSHLRKMIVDLEVPRFDGGCIFSQDPAIS 247
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
YI SEKSLN+DQR+AI+K+LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT
Sbjct: 248 YIRSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 307
Query: 998 NSAVDNLLIKLKSQ 1011
NSAVDNLLIKLK+Q
Sbjct: 308 NSAVDNLLIKLKAQ 321
>gi|392562935|gb|EIW56115.1| Dna2-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 1189
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 324/1048 (30%), Positives = 490/1048 (46%), Gaps = 172/1048 (16%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDD----------QGKCDVGRE 441
KVL ++ + + R V L +DW H + GDT NVIGE+ V +
Sbjct: 147 KVLTVVAVLTKDTRHVVLRDDWSHGDVRTGDTANVIGEWTTPSASSSSHAPMPSITVCSK 206
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKE 500
N I HPDVL++ T ++ + C R+ +L ++ S +L+ G +LH++ Q L
Sbjct: 207 QNLFIHHPDVLLTATSLSNASQCLRKPLLSNMVRSSSDVTPSLIWGNMLHEVMQTCLSVA 266
Query: 501 IPTMKFLEEYARLVLQKNIESLYAC--GVNENDIH-KTLVEAIPKMLNWIILFKDSQDLN 557
KF+++ V Q + L GV + I KT + + I +
Sbjct: 267 RWDDKFMDKKIAEVAQAGLGELLRIDMGVEQAIIEVKTRAKGLKVFAEKYIAQSPKPEAY 326
Query: 558 TPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE------------SK 605
G L IS++ DIEE W+P YGLKG IDAS+ + +
Sbjct: 327 LVNTRAGRGESSLLAISQLYDIEEDIWSPTYGLKGKIDASVEAVVHDLDDSSTPFARTAP 386
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
+ + + +P E KTG+ G MEHRAQ +LYTLLM ERY + SGLLYY QS++
Sbjct: 387 QLKKHSSPMPFEIKTGRAMAG---MEHRAQTMLYTLLMGERYGAEVPSGLLYYTQSEEVV 443
Query: 666 GVMVQRSDLVGLIMRRNEFANDI-----------IKA------------STTQQLPPML- 701
V R+++ L++ RNE A + +KA S LPP +
Sbjct: 444 RVPAARNEIRALMVMRNEMATYMMHRLRATASLSVKAEDEDPEQTNLAPSEEPFLPPTID 503
Query: 702 ------RAY-------------GGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
+ Y G + S + +++ HL+ +F + W+ LI LE
Sbjct: 504 DNRTCGKCYTLDTCMLYRKAVEGVEDDTSDIADIYALKTGHLSPLQAAFFKKWEALISLE 563
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNE--------HQKSYRDNRFVYHFVR 794
K+M + E+W S C +VLD S +QK + +R Y F +
Sbjct: 564 EKDMVRFRKELWTMAASEREERGRCFGGMVLDVSYRPPAPTKAANQKEGKIHRLTYRFRK 623
Query: 795 QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHV 854
+ G SL+ + T GD V +S E + LA+ G I E++ V
Sbjct: 624 --------TGAGGASLLSGHMVT---------GDAVTVSVEPELLALTRGFIVELTPDAV 666
Query: 855 SVSFSKPLR---LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ 911
+ L + R S + + V+RIDKDE+ +R NL QLF +
Sbjct: 667 VIGVDHELDEELIADRLRSIRGNFMEQVVFRIDKDELFGGMGRIRDNLAQLFYAGGDPRR 726
Query: 912 LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGT 971
L ++VDL P +FS+D LN +Q+RA+ KV+ A+DYALILGMPGT
Sbjct: 727 LE-LVVDLAKP------LFSEDSLPETTEVTAHLNQNQKRAVCKVMRAQDYALILGMPGT 779
Query: 972 GKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH 1031
GKT+ + +K L+ G SILL+SYT+SAVD +L KL +R+G + +H ++QK+
Sbjct: 780 GKTTVIAAIIKELVKAGKSILLSSYTHSAVDTILSKLDDADFGILRLGNPDKIHPDVQKY 839
Query: 1032 CLSAM-NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
++A ++E++++++ VVA TCL I
Sbjct: 840 TMAARPPAKNIEQLQQQVMSPPVVATTCLSI----------------------------- 870
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
D Y AR+ G+EISLFRRLS+ HP A+ L QYRM IM
Sbjct: 871 -----------DQYA---------ARKGGLEISLFRRLSDAHPAAVVDLTHQYRMNSDIM 910
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDL---------SSCSP---WLKEALNPCRPVIF 1198
LSN LIY DRL CGSD +A + + + S+C W+ + +F
Sbjct: 911 LLSNRLIYSDRLRCGSDAVATQSLSLPNAKFLRLLHAKSTCHDTCCWMNRLMAESCKAVF 970
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
V+TD +PA +++ + N VEA L+ ++T+ L+ + IG+I+ Y Q L+ + L
Sbjct: 971 VDTDQVPARDSRVGDLVENKVEAQLVHQVTECLLGCGVRQDQIGVISLYRQQLKLLSYLL 1030
Query: 1259 S-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+E+ T D+ QGRDKDCI++S VRS+++ L+ DW R+NV+ TRA+ KLI+
Sbjct: 1031 QDRKELEMLTADRSQGRDKDCIIISMVRSNDD--GMIGELVKDWRRMNVSFTRARSKLII 1088
Query: 1318 VGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+GS +TL PLLK + + + IL
Sbjct: 1089 IGSRKTLQGTPLLKEFFDLMDGRGWILT 1116
>gi|392590856|gb|EIW80184.1| Dna2-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 1051
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 316/1019 (31%), Positives = 498/1019 (48%), Gaps = 175/1019 (17%)
Query: 415 HTVIAPGDTVNVIGEFDDQ----GKCDVGRENNFLIVH-PDVLVSGTRVAASFSCPRRSV 469
H IA GDT+N++ D+ GK + +++ +++H PD+L++ T ++ + C R+ +
Sbjct: 8 HPRIA-GDTLNLVNVGDEDISPTGKLAISSKSDIIVIHHPDLLLTATSISNAPQCRRKPL 66
Query: 470 LDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVN 528
L + ++ S AL+ G +LH++ Q + F++E V++KN+ L G++
Sbjct: 67 LSQLVRSSSDITPALVWGNMLHEVMQTCMAAGRWDEAFMDEQIDSVIRKNLAELVKIGLS 126
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK-------KLKISEVTDIEE 581
D + V+A K L+ +F + +TP D + L +SE+ D+EE
Sbjct: 127 VADARRE-VKARSKGLH---VFSERYISSTPKPDAVLADTRATPQESASLAVSELHDVEE 182
Query: 582 MAWAPKYGLKGMIDASIRVKIESKR------------------NEINGMILPLEFKTGKI 623
W+P YGLKG +DA+++ I K+ ++P E KTG+
Sbjct: 183 DIWSPTYGLKGKLDATVQAVIAEKKVAPSSQSRSATSAGASASQTTTTHVMPFEIKTGRA 242
Query: 624 PNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNE 683
G +EHRAQ +LYTLL +ERY + +GLLYY Q+++ V R++L GLI+ RNE
Sbjct: 243 NAG---LEHRAQTMLYTLLAAERYASDVPAGLLYYTQAEEVVRVPRSRNELRGLIVARNE 299
Query: 684 FANDIIKASTTQQ-------LPPML-------RAY-------------GGNKECSGLGNM 716
A ++K S ++ LP + R Y + S + +M
Sbjct: 300 LAAWMMKRSGGKEVKEGERFLPETIDDKRVCGRCYVLDSCMLYRRAVENVEDDASPIADM 359
Query: 717 FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDAS 776
+ HLT F R W+ LI LE +++ + E+W C S+V+D S
Sbjct: 360 YKLKTDHLTQDQADFFRKWEALISLEEQDLVRFRKELWTMNAREREEKGRCFHSMVVDHS 419
Query: 777 -----------NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
+ ++ +RF Y FVR PS NA + + ++ +
Sbjct: 420 YRPAVEVDAEPDAPSSGHKIHRFTYRFVRS--PSAAANAETKERSL--------LNGHMA 469
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFS---KPLRLPGRNSSS--------DAD 874
GD +S E LA+A G I +S V + P +L R++ DAD
Sbjct: 470 VGDATTVSIEPHLLALARGFILSLSPHDVVLGVDHELSPEKLHLRHAGEVAAGSAKPDAD 529
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRM--IVDLEAPRF----DSGS 928
+ L V+RIDKDE+ +R NL +LF S + RR+ +VDL P F D
Sbjct: 530 APL--VFRIDKDEMFGGMGRIRDNLSRLFYASGAGNDERRLRLVVDLARPTFQDKADVRK 587
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+ D + + LN Q A+ +VL+A DYALILGMPGTGKT+ + ++ L+ G
Sbjct: 588 LLQDDATCARVMG--GLNASQMGAMTRVLSADDYALILGMPGTGKTTVIAALIRVLVAAG 645
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNI-NSVEEIKKR 1047
++LLTSYT+SAVD +L KL+ +R+G + VH +I+ L+ I ++E+++ +
Sbjct: 646 KTVLLTSYTHSAVDTILRKLRDAEFGILRLGNVDKVHPDIRHFTLADRRIPTTIEQLEHQ 705
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+ VVA TCL I DH
Sbjct: 706 IMSPPVVATTCLTI----------------------------------------DH---- 721
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
+ + + G+E SLFRRLS+ HP A+ L QYRM + IM LSN LIY +RL CGS+
Sbjct: 722 -----SSSSKGGLETSLFRRLSDAHPHAVVDLTHQYRMNEDIMLLSNTLIYSNRLKCGSE 776
Query: 1168 EIANAKIKVSDL-----------SSC---SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ 1213
E+A + + D SSC S W++ L +FV+TD +PA +++
Sbjct: 777 EVAKRSLVLPDRSFLEHELHGVGSSCQTESCWIEHLLTESCKAVFVDTDAIPALDSRVGD 836
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQ 1272
+ N +EA L+ ++T+ L+K+ I + IG++T Y Q L+ + L ++++ T DK Q
Sbjct: 837 LVQNDIEASLVFQLTEALLKSGIREQQIGVMTLYRQQIKLLSYLLHDHPAIDVLTADKSQ 896
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
GRDKDCI++S VRS N LL DW R+NV+ TRA+ KL+++GS +TL+ PLL+
Sbjct: 897 GRDKDCIIISMVRS--NGAGHIGDLLKDWRRLNVSFTRAQSKLVIIGSRKTLAGTPLLQ 953
>gi|403274109|ref|XP_003928831.1| PREDICTED: DNA2-like helicase [Saimiri boliviensis boliviensis]
Length = 911
Score = 431 bits (1108), Expect = e-117, Method: Compositional matrix adjust.
Identities = 327/987 (33%), Positives = 479/987 (48%), Gaps = 191/987 (19%)
Query: 418 IAPGDTVNVIGEFDDQGKCD-----VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
+ PGD +++ +G C + ++ +LI+HPD+L+SGT +A+S C RR+VL E
Sbjct: 38 VEPGDIIHL------EGDCTSDTWIIDKDFGYLILHPDLLISGTSIASSIRCMRRAVLSE 91
Query: 473 RLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNEND 531
+ SE + L+GT+LH++FQ + K L+E A +Q+
Sbjct: 92 TFRSSEPATRQMLIGTVLHEVFQKAISNSFAPEK-LQELAFQTIQE-------------- 136
Query: 532 IHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLK 591
+ + +M P+ + ++ +++ + DIEE W+P++GLK
Sbjct: 137 -----IRHLKEM---------------PSDNNKNNSTCNIEVVKSVDIEESIWSPRFGLK 176
Query: 592 GMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHI 651
G ID ++ VKI + + I+PLE KTGK N S+EHR+QV+LYTLL ER
Sbjct: 177 GKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-PDP 231
Query: 652 DSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKASTTQQ-----LPPMLR 702
++GLL YL++ Q V D L+ RN+ A + I K++T Q+ LP ++
Sbjct: 232 EAGLLLYLKTGQMYPVPANHLDRRELLKLRNQMAFSLFHRISKSATRQKTQLAALPQIIE 291
Query: 703 AYGGNKECSGLGNM-----------------------FDSHIYHLTTAHCSFLRHWDRLI 739
K CS +GN + HL H + W ++
Sbjct: 292 EEKTCKYCSQMGNCALYSRAVEQQMDGSSVPIVMLPKIEEETQHLKHTHLEYFSLWYLML 351
Query: 740 DLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHM 797
LE++ KN IW C+ +++ EH K+ D +++++F QH
Sbjct: 352 TLESQSKDNKKNHQNIWLMPVLEMEKSGSCIGNLI---QMEHVKTVCDGQYLHNF--QHK 406
Query: 798 PSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSV 856
AIP + L +GD +I+S E L A+ G + EI+ V+
Sbjct: 407 --------------NGAIPVTN----LMAGDRIIVSGEERSLFALCRGYVKEINMTTVTC 448
Query: 857 SFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMI 916
L RN S +S L +R+D++E + NL +L + S +LR +I
Sbjct: 449 -------LLDRNLSVLPESTL---FRLDQEEKNCDINTPLGNLSKLMENTFVSKKLRDLI 498
Query: 917 VDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKT 974
+D P F S SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT
Sbjct: 499 IDFREPHFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKT 558
Query: 975 STMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
+T+ V+ L S L + S+ D
Sbjct: 559 TTICTLVRLLFFCLESKCLYQFLLSSED-------------------------------- 586
Query: 1035 AMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
+VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+
Sbjct: 587 -----------------LIVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFS 629
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
+FVLVGDH QLPPLV + EAR GM SLF+RL E+ A+ L QYRM IM LSN
Sbjct: 630 RRFVLVGDHQQLPPLVLNHEARALGMSESLFKRL-EQKKNAVVQLTVQYRMNSKIMSLSN 688
Query: 1155 ALIYGDRLSCGSDEIANA----------KIKVSDLSSCS--PWLKEALNPCRPVIFVNTD 1202
L Y +L CGSD++ANA K+++ + CS PWL P PV F+NTD
Sbjct: 689 KLTYEGKLECGSDKVANAVINLPRLKDVKLELEFYADCSDNPWLMGVCEPNNPVCFLNTD 748
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ----ANLIRHSL 1258
+PA E + ++N EA LI +T +K DIGII PY Q ++L+ HS
Sbjct: 749 KVPAPEQVEKGGVSNITEAKLIVFLTSIFIKAGCNPSDIGIIAPYRQQLKIISDLLAHS- 807
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
SV VE++T+DKYQGRDK ILVSFVRS N LL DW R+NVA+TRAK KLI++
Sbjct: 808 SVGMVEVNTVDKYQGRDKSIILVSFVRS--NKDGTVGELLKDWRRLNVAITRAKHKLILL 865
Query: 1319 GSCRTLSKVPLLKLLINKVGEQSGILN 1345
G +L+ P L+ L++ + + I++
Sbjct: 866 GCVPSLNCYPPLEKLLDHLNSEKLIID 892
>gi|449017109|dbj|BAM80511.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]
Length = 1560
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 360/1110 (32%), Positives = 530/1110 (47%), Gaps = 193/1110 (17%)
Query: 407 VHLWEDWFHTVIAPGDTVNVI-----GEFDD-QGKCD--------------VGRENNFLI 446
V L + W + GDT+ ++ GE+ Q +C V E N I
Sbjct: 451 VVLQDSWSELNVQQGDTIRLVRCTAAGEYAPFQARCSGAAAQNDVPGHPFIVSAEENLCI 510
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCS----ERSISALLGTLLHQIFQAGLMKEI- 501
+HPDVLVSGT VA +FSC RR VL ER + S + +AL GTLLHQ+FQ L I
Sbjct: 511 LHPDVLVSGTSVANAFSCLRRVVLGERNRYSIHQPRTTRAALRGTLLHQLFQQLLWCCIH 570
Query: 502 -----PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKM-LNWIILFKDSQD 555
PT+ EE ++++ LYA G +E+++ L E++P + L+ L +
Sbjct: 571 SAETKPTVS--EEDLCQLVRRYYAELYALGESEDELLSYLRESVPDLALHVQHLCCEQHG 628
Query: 556 LNTPTV-DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL 614
++ G+ ++I ++ DIEE W+P +GLKG ID ++ ++ + + +G L
Sbjct: 629 VHLQVRGQCNLSGVDSMRIQKLYDIEESIWSPIFGLKGSIDVTVAAELLDR--DRSGQTL 686
Query: 615 P---LEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG----- 666
P LE KTG+ G S + HRAQ+ILY LL+SERY + + +L YLQ++QT
Sbjct: 687 PITCLELKTGR-QEGFSGIAHRAQLILYALLLSERYGTSVQATILLYLQNNQTGSNCGAG 745
Query: 667 -----------------VMVQRSDLVGLIMRRNEFANDI----IKASTTQQ--------- 696
+ + R++L+G++M RN+ A+ + AS +Q
Sbjct: 746 SRLAHREHGQLTMSLHLIPMVRAELIGILMTRNKLAHYLRFRRASASAAEQEDPLDAVGR 805
Query: 697 ----LPPMLRAY---------------------GGNKECSGLGNMFDSHIYHLTTAHCSF 731
LPP L+ G S + +F L+ H ++
Sbjct: 806 SWLHLPPPLQHQENLCSFCYVRDACALYHRVIDSGEAHSSAIPAVFREMADGLSNQHVAY 865
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYH 791
RHW + LE + + E+W + + C+ + L E RFV
Sbjct: 866 YRHWLAITRLEEEAAVANREEVWLLSPTERSQLGRCVGELEL-VQVEKTNGLGTGRFVDC 924
Query: 792 FVRQHMPSPNLNASD--GDSLIGAA---IPTKD---------MDCTLRSGDYVILSTESD 837
+ R +ASD G S A P D L +GDYV++S
Sbjct: 925 Y-RHRFRIVVESASDKCGGSTASPAWRQCPESDDLHLEAMQGARWDLLTGDYVLVSLYWR 983
Query: 838 R--------------------------LAVASGLITEISRFHVSVSF------SKPLRLP 865
R A+A G + ++ + SK L+
Sbjct: 984 RPPRALPDGGDVSAAPSADVWDPLRQETAIAGGFVAQVQPLTGEIEIDLERDCSKWLQ-- 1041
Query: 866 GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF- 924
R+ + WR+D++E+ FS M NL L A+ +LRR+++DLEAPRF
Sbjct: 1042 -RHPLVECIPASTVRWRVDREELSAGFSTMYGNLEALLYPEAE--RLRRLVIDLEAPRFT 1098
Query: 925 -DSGSVFSQDPALSYIWS----EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
G+ SQ P+ S + LN+DQ+RAI +VL ++DY L+LGMPGTGKT+T+
Sbjct: 1099 LSPGAEHSQCPSSSALLHMERFAADLNEDQKRAIERVLRSQDYVLLLGMPGTGKTATVAC 1158
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI-DFVRIGRHEVVHKEIQKH--CLSAM 1036
V L+ G S+LL S+T+SAVDN+L +L ++ FVR+G V ++ + C M
Sbjct: 1159 LVALLVDAGCSVLLASHTHSAVDNVLRRLVEHNVHKFVRLGNRTHVDPQLWPYMLCTEQM 1218
Query: 1037 NINSVE-----------EIKKRLDQVKVVAVTCLGITNPLL-TDKKFDVCIMDEAGQTTL 1084
S E R ++ +VA TCLG ++P+ +KFD I+DEA Q
Sbjct: 1219 PDTSAEPAPSPLLPSLDAFSARFEEAAIVATTCLGASHPVFYRRRKFDYVIVDEASQIAQ 1278
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
PV LGPL FA K FVLVGD QLPPL + A+ G + SLF RL HP+A+ L QY
Sbjct: 1279 PVVLGPLRFAQKAFVLVGDDKQLPPLARDPLAQAQGADESLFTRLCAAHPEAVVVLHRQY 1338
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKI--KVSDLSSCSP---WLKEALNPCRPVIF 1198
RM IM LSNAL+Y L CG A + + L SP WL L+P + V+F
Sbjct: 1339 RMAADIMLLSNALVYNGSLVCGDQATAEQHLTNRQQGLRYVSPTPDWLVHVLDPRKRVLF 1398
Query: 1199 VNTDMLP--AYEAK-DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
+NTD A E + +++ N EA +I +I + L IE + IGI +P +Q +LI+
Sbjct: 1399 LNTDAAQDRAREFRCGQESICNYFEASIIVRIVEALDDMGIERQHIGITSPLRAQVSLIQ 1458
Query: 1256 HSL--------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
+ + + E TID++QGRDKD +LVS VRS+ N R +L DW R+NVA
Sbjct: 1459 NQFHQGQRIRNAGTLPECRTIDQFQGRDKDVLLVSLVRSNSNAR--IGQVLRDWRRLNVA 1516
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+TRA+ KL+ VGS +T+ P + LI +
Sbjct: 1517 MTRARCKLVFVGSAQTMRTSPFVARLITLI 1546
>gi|109732330|gb|AAI15717.1| Dna2 protein [Mus musculus]
Length = 966
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 298/915 (32%), Positives = 467/915 (51%), Gaps = 121/915 (13%)
Query: 398 NEQSGEERAVH--------------LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
NE+ EE+ +H L W + PGD V++ G+ + + +
Sbjct: 58 NERGAEEKRLHVTASQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWI-IDDDFG 116
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIP 502
+ I++PD+++SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + +
Sbjct: 117 YFILYPDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFA 176
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLN 557
+ L+E A L+ ++++ +Y +++++I + E +P W F S +
Sbjct: 177 PER-LQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLPSFSKWAEDFMRKGPSSEFP 235
Query: 558 TPTVDFGSDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ SDG + +++ + DIEE W+P++GLKG ID ++ VKI + ++
Sbjct: 236 QMQLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKMKYK 294
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTGK N S+EHR+QV+LYTLL ER + ++G L YL++ Q V
Sbjct: 295 VMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHL 350
Query: 673 DLVGLIMRRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGNM------- 716
D L+ RN A ++ +A+ ++ LP ++ K CS +GN
Sbjct: 351 DKRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAV 410
Query: 717 ----------------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRG 758
HL AH + W ++ LE+ K+ + IW +
Sbjct: 411 EEQGDDASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPA 470
Query: 759 SGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTK 818
S C+ ++V E D +++++F R++ P P N
Sbjct: 471 SELEESGNCVGNLV---RTEPVSRVCDGQYLHNFQRKNGPMPATN--------------- 512
Query: 819 DMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLR-LPGRNSSSDADSL 876
L +GD +ILS E +L A++ G + ++++ V+ + L LP
Sbjct: 513 -----LMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNLSTLPATT-------- 559
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDP 934
V+R+D++E S NL +L + S +LR +I+D P+F + SV D
Sbjct: 560 ---VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDA 616
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
+ K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLT
Sbjct: 617 KDTVANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLT 676
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQ 1050
SYT+SAVDN+L+KL + F+R+G+ VH +IQK + +I S+ +++ +
Sbjct: 677 SYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNS 736
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV
Sbjct: 737 HPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLV 796
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y +L CGSD +A
Sbjct: 797 VNREARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVA 855
Query: 1171 NAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
NA + + +L S SPWL L P PV F+NTD +PA E ++ ++N
Sbjct: 856 NAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNV 915
Query: 1219 VEACLIAKITQELVK 1233
EA LI +T +K
Sbjct: 916 TEARLIVFLTSTFIK 930
>gi|390343708|ref|XP_796771.3| PREDICTED: DNA2-like helicase-like isoform 2 [Strongylocentrotus
purpuratus]
Length = 882
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 306/890 (34%), Positives = 472/890 (53%), Gaps = 124/890 (13%)
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP--TVDFGSDGLKK-----LKIS 574
+Y+ V+E++ L+E + + + I + D+ + P +VD G K + +S
Sbjct: 17 MYSLKVDEDN----LLEEVGEYADTIKRWSDTYLGSNPRGSVDIKWPGSFKPENCGVSVS 72
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIE--SKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+VTDIEE W+P++G+KG +D ++ VKI S+ +PLE KTGK N S+EH
Sbjct: 73 KVTDIEESIWSPRWGVKGKVDLTVEVKIHRPSRSQPGQHANMPLELKTGKETN---SIEH 129
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA---NDII 689
R+Q+ILY+L++ + D G L Y+++ + V D LI RN+ A +
Sbjct: 130 RSQLILYSLMLGD-LQPTSDLGFLLYIKTSAMKAVPANHLDKRELIHLRNQLAYYLSRTA 188
Query: 690 KASTTQQ---------------LPPML----RAYGGNKEC-------------------- 710
+++TT +PP+L R K C
Sbjct: 189 RSTTTPTAPSSADWPSQTKPSLIPPILPEPIRDDFSCKRCAHLQACSSLHKLEGSSTQLA 248
Query: 711 SGLGNMFDSHIYHLTTAHCSFLRHWDRL--IDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
S + +F I HL +H + HW L ++ EA + + IWC + C
Sbjct: 249 SSVQELFTESIEHLPDSHLQYFAHWYLLCCLEHEATKKRNKSKNIWCKESTEREKDGECW 308
Query: 769 SSI-VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
S + + A+ + Q+S F F R+ G A K C ++ G
Sbjct: 309 SHMEFMSATPKDQQS---GGFTLIFRRKQ----------GKKGFSEASLDK---CFMKGG 352
Query: 828 DYVILSTE-SDRLAVASGLITEISRFHVSVSF-SKPLRLPGRNSSSDADSLLHEVWRIDK 885
D V++S E S R+A+ G I IS+ + +S S+P + G N V+RIDK
Sbjct: 353 DRVVISEEGSRRVAICVGFIDTISKTDIKISSDSQPKKDGGGNP----------VYRIDK 402
Query: 886 DEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL------SYI 939
D+ S + NL +L + ++LR +++D A + Q P L
Sbjct: 403 DDSYNSMAASLVNLTKLM--KPEHNKLRNIVIDKRA------TTSVQKPNLPARARGQVA 454
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ LN+DQR AI VL ++DY +I+GMPGTGKT+T+V V+ L+ G S+LLTSYT+S
Sbjct: 455 TIMRDLNEDQRAAIKAVLRSQDYTVIIGMPGTGKTTTIVALVRILVACGMSVLLTSYTHS 514
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVT 1057
AVDN+L+KL ID +R+G +H E+++ S + + V ++ ++++ KVVA T
Sbjct: 515 AVDNILLKLLKYKIDILRLGAQHNIHPELREFSDSKLMKEASGVSQLAMQMERKKVVATT 574
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
LG+ + LLT FDVCI+DEA Q + PV LGPL ASKFVLVGD QLPPLVQS+ AR+
Sbjct: 575 SLGMKHALLTRHSFDVCIVDEASQISQPVCLGPLFSASKFVLVGDQCQLPPLVQSSRARD 634
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
GM+ SLF+RL H ++++L Q+RM IM +SN ++Y + CG+DE+A A I +
Sbjct: 635 LGMDESLFQRLVSAHTSSVTSLSLQFRMHSEIMSISNHMVYDGAMRCGNDEVAKATISLP 694
Query: 1178 DL-----SSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP--VEACLIAKITQ 1229
+ SC+ WL++A+NP V F+NTD A+ D + +N +EA L+ +I +
Sbjct: 695 NWDAWCKESCADAWLEDAVNPSTVVSFLNTDQ--AWSPTDAASPSNTNRLEAILVRRIVE 752
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLS-----VSSVEIHTIDKYQGRDKDCILVSFV 1284
L++ IG+I+PY Q L+ +L+ V S+E++T+DKYQGRDKD I++SF
Sbjct: 753 SLMQAGCTAAQIGVISPYRRQCQLLTSTLADLGSKVKSLEVNTVDKYQGRDKDVIVMSFS 812
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV-PLLKLL 1333
S + + S+L D R+NVA+TRAK KL+++GS + LS+ P+ KL+
Sbjct: 813 HSQTDSQG--GSILNDLRRLNVAMTRAKHKLLLIGSLKCLSQFEPVQKLI 860
>gi|320581264|gb|EFW95485.1| Essential tripartite DNA replication factor [Ogataea parapolymorpha
DL-1]
Length = 1226
Score = 424 bits (1091), Expect = e-115, Method: Compositional matrix adjust.
Identities = 290/861 (33%), Positives = 451/861 (52%), Gaps = 100/861 (11%)
Query: 478 ERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLV 537
E ++ +LG ++HQ+FQA L + + F +EY +L N +LY+ G + +++ T++
Sbjct: 410 EHAVPLVLGNIVHQLFQACLKENDVSDAFFDEYLEELLDANQIALYSIGASRHELKATVL 469
Query: 538 EAIPKMLNWIILF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDA 596
E + + W+ + +D Q F S + + S+V DIEE W+P YGL+G+ID
Sbjct: 470 EHVDYIKEWVATYTRDPQ--------FSSTA--QFQASKVLDIEENIWSPMYGLRGLID- 518
Query: 597 SIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLL 656
V IE+ + + +++P+E KTG+ + +RAQ LYTLL + D +L
Sbjct: 519 ---VVIEASLRDGSKVVVPMEIKTGR-----DYIANRAQATLYTLLSYYEAINANDLRML 570
Query: 657 YYLQSDQTQGVMVQRSDLVGLIMRRN-EFANDIIKASTTQQLPPMLRAYGGNKECSGLGN 715
+++ +Q + S+L + + + E + + T +L A G E SGL +
Sbjct: 571 VNIRNHISQYLSYGASELPPIKNQPSCERCFVLNECMTYNKL-----AEHGTAEKSGLDD 625
Query: 716 -MFDSHIYHLTT-AHCSFLRHWDRLIDLEAKEMQVVKNEIWC----------SRGSGGNH 763
++D+ HL + F HW+ L+ E + K ++WC + GG H
Sbjct: 626 GLYDTLTGHLNKPQYPEFFNHWNGLLSKEESFVNSFKKDLWCYSAAERELKGGKAVGGLH 685
Query: 764 FTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQ---HMPSPNLNASDGDSLI--------G 812
T C + S R RF+Y F R H P N + D +I G
Sbjct: 686 LTQCQEA--------EYASGRAKRFLYTFERDDTVHQPMSNTQLAKHDRIIVSDESGQFG 737
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
A + TLRS + V++ST+ R ++ ++ H V F L SS+
Sbjct: 738 LAFGFVE---TLRS-NVVVVSTDR-RFENSTVKMSNFDAAHNQV-FESVLS----GSSAA 787
Query: 873 ADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQ 932
+ + +RIDKDE+ ++ R+NL+ LFL + RR++VDLE P+F +
Sbjct: 788 SVGAKKKTYRIDKDEMFHGLALARFNLLNLFLPDG-DEKTRRLVVDLEPPQF------AG 840
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
P L + + N DQ RA +VL A+DY LILGMPGTGKT+ +K L+ G ++L
Sbjct: 841 KPLLHSQFDKSRFNADQLRAFDRVLRAQDYCLILGMPGTGKTTVTASLIKCLVENGQTVL 900
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFV------RIGRHEVVHKEIQKHCLSAMN----INSVE 1042
+ SYT+SAVDN+L K+ ID V R+G + + ++++K+ L + + + S E
Sbjct: 901 IASYTHSAVDNILEKV----IDIVDNPKILRVGAPKKITEKVRKYSLYSTDTIYPMESAE 956
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
+ + + +VA TCLGI + ++ FD CI+DEA Q ++PV LGPL FA KFVLVG
Sbjct: 957 DFRHAFLETNIVATTCLGIQDTAFIHRQHFDYCIIDEASQVSMPVCLGPLRFADKFVLVG 1016
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
DHYQLPPLV+S EAR GM+ SLFR LSE++PQ++ L QYRM +M LSN LIY R
Sbjct: 1017 DHYQLPPLVRSAEARAGGMDKSLFRILSEKYPQSVVELTHQYRMSADVMMLSNCLIYDGR 1076
Query: 1162 LSCGSDEIANAKIKVS----------DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
L CG+ ++A ++V + W+ +P V+F+N D +PA E +
Sbjct: 1077 LKCGTPQVAYQTLQVPFPERLQEKCIQIPKPFRWMDHVFDPKNRVLFLNHDGVPAQEVAN 1136
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDK 1270
+ + NPVEA LI +I + LV + IG+++ Y +Q L + +E+ T D+
Sbjct: 1137 GEKIENPVEADLILQIIKCLVSCGVSASSIGVMSFYRAQLRYFYRGLRNHPDIEVLTADQ 1196
Query: 1271 YQGRDKDCILVSFVRSSENPR 1291
+QGRDKDCI++S VRS+E R
Sbjct: 1197 FQGRDKDCIIISLVRSNEKNR 1217
>gi|395820933|ref|XP_003783810.1| PREDICTED: DNA2-like helicase [Otolemur garnettii]
Length = 1268
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 304/896 (33%), Positives = 465/896 (51%), Gaps = 108/896 (12%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASF 462
+ER + L DW + PGD +++ G+ G + +LI++PD+L SGT +A+S
Sbjct: 141 KERCI-LRNDWCSIPVEPGDIIHLEGDCTS-GTWIIDEHFGYLILYPDMLFSGTSIASSI 198
Query: 463 SCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNI 519
C RR++L E + S+ + L+GT+LH++FQ + K L+E A +Q K++
Sbjct: 199 RCMRRAILSETFRSSDPATRQMLIGTVLHEVFQKAISDSFAPEK-LQELAFQTIQETKHL 257
Query: 520 ESLYACGVNENDIHKTLVEAIPKMLNWI--ILFKDSQ------DLNTPTVDFGSDGLKKL 571
+ +Y +N+++I + + E +P W + KD+ L+ PT ++ +
Sbjct: 258 KEMYRLNLNQDEIKQEIEEYLPSFSKWAGDFMHKDTSADFPQIQLSLPTNGSKNNSTCNI 317
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
++ DIEE W+P++GLKG ID ++ VKI + ++ ++PLE KTGK N S+E
Sbjct: 318 EVVNSVDIEESIWSPRFGLKGKIDVTVGVKIH-QGSKTKYKVMPLELKTGKESN---SIE 373
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----ND 687
HR+QVILYTLL ER ++G L YL++ Q V D L+ RN+ A +
Sbjct: 374 HRSQVILYTLLCQERRADP-EAGWLLYLKTGQMYFVPANHLDKRELLKLRNQMAFFSFHR 432
Query: 688 IIKASTTQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDS 719
I K+ + Q+ LP ++ K CS +GN
Sbjct: 433 ISKSVSGQKTQLASLPQIIEEEKTCKYCSQMGNCALYSRAIEQQMEHNSVPVVMLPKIKE 492
Query: 720 HIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASN 777
HL H + W ++ LE++ KN IW S C+ +++
Sbjct: 493 ETQHLKLTHLEYFSLWCLMLTLESQSKDNKKNYQNIWLMPTSKMEESGNCIGNLI---RT 549
Query: 778 EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD 837
++ K+ + ++++HF R++ +IP + L +GD +ILS E
Sbjct: 550 KNVKAIGNGQYLHHFQRKN----------------GSIPVTN----LMAGDRIILSGEER 589
Query: 838 RL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
L A++ G + I+ V+ L RN S +S L R+D++E
Sbjct: 590 TLFALSRGYVKGITMTTVTC-------LLDRNLSVLPESTLL---RLDQEEKNCDIDTPL 639
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAII 954
NL +L + S +LR +I+DL+ P+F SV + + K LN QR+A+
Sbjct: 640 GNLSKLMENTNVSKKLRDLIIDLQEPQFIPYLSSVLPHNAKDTVACILKGLNKPQRQAMK 699
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I
Sbjct: 700 KVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIG 759
Query: 1015 FVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDK 1069
F+R+G+ VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 760 FLRLGQTHKVHPDIQKFTEEEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPVFSRK 818
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL
Sbjct: 819 TFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVLNQEARALGMTESLFKRL- 877
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS--------- 1180
E++ A+ L QYRM IM LSN L Y +L CGS+++ANA I + +
Sbjct: 878 EQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSEKVANAVIILPNFKDVKLELEFY 937
Query: 1181 ---SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK 1233
S +PWL + L P PV F+NTD +PA E + ++N EA LI +T +K
Sbjct: 938 ADYSDNPWLIKVLEPNNPVCFLNTDKVPAPEQVEKSGVSNITEARLIVFLTSVFIK 993
>gi|444316956|ref|XP_004179135.1| hypothetical protein TBLA_0B08000 [Tetrapisispora blattae CBS 6284]
gi|387512175|emb|CCH59616.1| hypothetical protein TBLA_0B08000 [Tetrapisispora blattae CBS 6284]
Length = 1697
Score = 424 bits (1090), Expect = e-115, Method: Compositional matrix adjust.
Identities = 317/1023 (30%), Positives = 514/1023 (50%), Gaps = 169/1023 (16%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQIFQAGLMK 499
+N LI++PD+L+S T + + C RR+V+ K S E S+ +G ++H++ Q G+
Sbjct: 577 DNILILNPDLLLSATTIGTAIDCQRRAVIQSLFKDSGGEPSLPMTIGNIVHELIQEGIKH 636
Query: 500 EIP----TMKFLEEYARLVLQKNIESLYACGVNENDIHKTL----VEAIPKMLNWIILFK 551
+I T K+L+ +L+ N S+ C + +++ K + ++ + + L+ I
Sbjct: 637 KIQNNSITTKYLQNNLTSLLENNKFSILICNSSIDEVRKEIETNHLKNVYEFLDKCI--- 693
Query: 552 DSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEING 611
D+ + P GS +++ IS + DIEE W+P YG+KG +DA++ + RN
Sbjct: 694 DTINKGEPIPVSGSSKTERMAISNIIDIEENIWSPMYGIKGFLDATVEI-----RNAAGK 748
Query: 612 MILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQR 671
I P E KTGK+ N + H AQ +YT+L+++RY I+ LLYY +
Sbjct: 749 TIAPFEIKTGKLRN----ISHEAQGFVYTMLLNDRYELPIEFCLLYYSRDSHMTKYPKIL 804
Query: 672 SDLVGLIMRRNEFA-------NDIIKASTTQ-QLPPMLRAYGGNK-----ECSGLGNMF- 717
+ L LI+ RN + N++ + + QLPP+ + K +C L +
Sbjct: 805 NHLKHLILSRNIVSTYLKYQLNELTNSRQFRMQLPPLPHSSKCEKCPIKQQCMVLDKLLG 864
Query: 718 DSHI---------YHLTTAHC--------SFLRHWDRLIDLEAKEMQVVKNEIWCSRGSG 760
D+ Y L T H +F ++++ LI E + + E++
Sbjct: 865 DNEFTMNSSLKEDYSLITNHLLENEHKYRTFFQYYNDLITKEESSISSLNKEMFLLDSKT 924
Query: 761 GNHFTG-CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKD 819
+G CLS + + ++ S R ++Y F R N+ + + + + D
Sbjct: 925 RESLSGKCLSQLTVTGWTKN--SDRQESYLYTFARS-------NSDKEHNFLSSHLVEND 975
Query: 820 MDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS-------- 871
M VI+S E+ ++ G++ I+ +++ + L R+ ++
Sbjct: 976 M---------VIISDENGHFCLSQGIVQNITNSMITILVRRSLLNNKRDQTNGSIGSNSI 1026
Query: 872 -----------DADSLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ-------- 911
+A L+ V +RIDK+E+ S ++ R+NL+ LFL +S+
Sbjct: 1027 QSVFSIPVTQEEALQTLNAVTYRIDKNEVHQSLAIARFNLLNLFLPPVDASEFIEDPTSR 1086
Query: 912 --------------LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSL----NDDQRRAI 953
+RR++VD PRF + P + Y +KSL N+DQ AI
Sbjct: 1087 KVRLIKPSEGGDLNMRRILVDDIEPRF---TPMEHKPLVRY---DKSLLSHFNEDQLTAI 1140
Query: 954 IKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS-QS 1012
KV+ +DY+LILGMPGTGKT+ + ++ L+ G S+LLTSYT+SAVDN+++KLK+ +
Sbjct: 1141 DKVMRTEDYSLILGMPGTGKTTVIATIIQILVAAGKSVLLTSYTHSAVDNIILKLKNIKK 1200
Query: 1013 IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLT--DKK 1070
VR+G +H ++ K + N + EI ++ +VA T LGI + L + +K
Sbjct: 1201 SQLVRLGSPNKIHPKVLKFIPAYENSETFNEIMNDINDKSIVATTSLGIGHLLFSMREKD 1260
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD I+DEA Q ++PV+LGPL + KF++VGDHYQLPPLV++ AR G+ S F L E
Sbjct: 1261 FDYVILDEASQISMPVALGPLRYGKKFIMVGDHYQLPPLVKNEVARLGGLAKSPFEILCE 1320
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-DLSSCSP----- 1184
+HP A+ L QYRM + IM+LSN LIY ++L CGS++IAN K+ + +L+ S
Sbjct: 1321 KHPNAVINLTFQYRMNKDIMKLSNFLIYENKLKCGSEKIANQKLDIHFNLNETSKDSLKK 1380
Query: 1185 ---------WLKEALNPCRPVIFVNTD-MLPAYEAKDHQTLNNPVEACLIAKITQELVKN 1234
W++E L P R V+F+N D L E + +++N E +I KN
Sbjct: 1381 YQTNKKENNWIREILEPERRVVFLNYDNCLDIQETSLNDSISNDGEVAII--------KN 1432
Query: 1235 EIEGK------------DIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCI 1279
I+GK DIGI+ Y Q ++ +EI T+D++QGRDKD +
Sbjct: 1433 IIDGKMIYDNGSYDKNDDIGIMALYRGQLGKLKKRFDDEKYHGLEILTVDQFQGRDKDLV 1492
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
++S VRS+E R LL + R+NVA++RAK KLI++GS T+ V +K I K+ E
Sbjct: 1493 VISMVRSNE--RLQGGQLLKELRRVNVAMSRAKCKLIIIGSKSTIGSVVEIKSFI-KLLE 1549
Query: 1340 QSG 1342
G
Sbjct: 1550 NEG 1552
>gi|147846002|emb|CAN84171.1| hypothetical protein VITISV_028526 [Vitis vinifera]
Length = 315
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/342 (64%), Positives = 246/342 (71%), Gaps = 78/342 (22%)
Query: 1036 MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP---------- 1085
M+I+SVE+IK RLDQV VVAVTCLGITNPLL +K+FD+CIMDEAGQTTLP
Sbjct: 1 MDIHSVEDIKLRLDQVSVVAVTCLGITNPLLANKRFDICIMDEAGQTTLPLILLISQYPT 60
Query: 1086 ----------------------VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
VSLGPLMFAS FVLVGDHYQLPPLVQS EARENGM IS
Sbjct: 61 NRTSAMLLPCLIAYKEQISPSKVSLGPLMFASIFVLVGDHYQLPPLVQSAEARENGMGIS 120
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
LF RLSE HPQAISALQSQ
Sbjct: 121 LFCRLSEAHPQAISALQSQ----------------------------------------- 139
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
AL+P RPVIF+NTDML A+EAKDH+T+NNP+EAC+I+++ +ELV N IEG+DIGI
Sbjct: 140 -----ALDPERPVIFINTDMLSAFEAKDHKTVNNPIEACIISEVAEELVNNGIEGEDIGI 194
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPYNSQANLIRH++S +SVEI+TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR
Sbjct: 195 ITPYNSQANLIRHTVSTTSVEINTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 254
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
INVALTRAK+KLIMVGS RTLSKVPLL+LLI KV EQSG LN
Sbjct: 255 INVALTRAKRKLIMVGSFRTLSKVPLLRLLIEKVEEQSGRLN 296
>gi|344247613|gb|EGW03717.1| DNA2-like helicase [Cricetulus griseus]
Length = 767
Score = 421 bits (1082), Expect = e-114, Method: Compositional matrix adjust.
Identities = 287/790 (36%), Positives = 413/790 (52%), Gaps = 100/790 (12%)
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
+PLE KTGK N S+EHR+QV+LYTLL ER ++G L YL++ Q V R D
Sbjct: 1 MPLELKTGKESN---SIEHRSQVVLYTLLSQERR-DDPEAGWLLYLKTGQMYPVPANRLD 56
Query: 674 LVGLIMRRNEFANDII-KASTTQQ--------LPPMLRAYGGNKECSGLGNM-------- 716
L+ R++ A ++ + S T LP ++ K CS +GN
Sbjct: 57 KRELLKLRDQLAFSLLHRVSRTASGEETRLSPLPQIIEEEKTCKYCSQMGNCALYSRAVE 116
Query: 717 ---------------FDSHIYHLTTAHCSFLRHWDRLIDLEA--KEMQVVKNEIWCSRGS 759
HL H + W ++ LE+ K+ + IW
Sbjct: 117 EQVDDTSVPEGMLSKIHEETRHLKPTHLKYFSLWCLMLTLESQSKDNRKSHQNIWLMPAP 176
Query: 760 GGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPT 817
C+ ++V E + D +++++F R++ MP+ NL A
Sbjct: 177 KMEEVGNCIGNLV---QTEPVRRVCDGQYLHNFHRKNGAMPATNLMA------------- 220
Query: 818 KDMDCTLRSGDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
GD +ILS E +L A++ G + EI+ V+ L RN S+ D+
Sbjct: 221 ---------GDRIILSGEDRKLFALSKGYLKEINEVAVTC-------LLDRNLSTLPDTT 264
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDP 934
L +R+D++E NL +L + S +LR +I+D + P+F SV D
Sbjct: 265 L---FRLDREEKNCEIDTPLGNLSKLMENTNISKRLRELIIDFKEPQFVPYLSSVLPHDA 321
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
+ K LN QR+A+ KVL +KDY L++GMPGTGKT+T+ V+ L G S+LLT
Sbjct: 322 KDTVANILKGLNKPQRQAMKKVLLSKDYTLVVGMPGTGKTTTICALVRILSACGFSVLLT 381
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQ 1050
SYT+SAVDN+L+KL I F+R+G+ VH +IQK + +I S+ +++ +
Sbjct: 382 SYTHSAVDNILLKLAKFKIRFLRLGQSHKVHADIQKFTEQEICRSRSIKSLALLEELYNS 441
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
+VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV
Sbjct: 442 HLIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSQRFVLVGDHQQLPPLV 501
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD +A
Sbjct: 502 LNREARALGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDRVA 560
Query: 1171 NAKIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
NA I + + S +PWL P PV F+NTD +PA E ++ ++N
Sbjct: 561 NAVITLPNFKDVKRSLEFSASYSDNPWLAAVFEPDNPVCFLNTDKVPAPEQTENGGVSNI 620
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRD 1275
EA L+ +T +K +IGII PY Q +I L+ SS VE++T+DKYQGRD
Sbjct: 621 TEARLVVFLTSVFIKAGCSPSNIGIIAPYRQQLRIINDLLACSSVGMVEVNTVDKYQGRD 680
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K +LVSFVRS N LL DW R+NVA+TRAK KLI++GS +L + P L+ L +
Sbjct: 681 KSLVLVSFVRS--NKDGTLGELLKDWRRLNVAITRAKHKLILLGSVSSLQRFPPLEKLFH 738
Query: 1336 KVGEQSGILN 1345
+ + I++
Sbjct: 739 HLNTEQLIVD 748
>gi|302672833|ref|XP_003026104.1| hypothetical protein SCHCODRAFT_259008 [Schizophyllum commune H4-8]
gi|300099784|gb|EFI91201.1| hypothetical protein SCHCODRAFT_259008 [Schizophyllum commune H4-8]
Length = 1174
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 329/1052 (31%), Positives = 503/1052 (47%), Gaps = 177/1052 (16%)
Query: 383 DPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDD--------QG 434
D D KS V+R+ + + E R+V L + W I GD +N++G+F+
Sbjct: 136 DDFDCKS--LVVRV--DGTDELRSVLLRDHWRFMDIRSGDILNILGQFELLPASSSRLTS 191
Query: 435 KCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIF 493
+ + N LI HPD+L++ T +A + C R+ +L ++ S AL+ G +LH++
Sbjct: 192 QIIITSTRNLLIHHPDILMTATAIANAPQCRRKPLLSSLVRSSSDVTPALVWGNMLHEVM 251
Query: 494 QAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVN----ENDIHKTLVEAIPKMLNWII- 548
Q+ K+ EE V+ + L + ++HK +I
Sbjct: 252 QSCFRASRWDDKWFEERIDEVVHNGLGELVKIDATIETAKGELHKRAAGLRAFSQRYIAD 311
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+ KD +L T T D L L I+ + DIEE W+P YGLKG +DA+I I ++
Sbjct: 312 MPKDEAEL-TDTRDKQEKKL--LAIARIFDIEEDIWSPTYGLKGKLDATIDAVISERKTS 368
Query: 609 INGMIL-----PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQ 663
+ L P E KTG+ + +EHRAQ +LY LL +ERY + SGLLYY Q D+
Sbjct: 369 TDKANLKRGPKPFEIKTGRT---TAVLEHRAQTMLYCLLAAERYGVEVPSGLLYYTQHDE 425
Query: 664 TQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ---------------LPPMLRAYGGNK 708
V ++ GL+ RNE A +++ + LPP + K
Sbjct: 426 VVNVPSNHHEIRGLLSARNEMAAYMMRRMRVPKRQTACEEEAPVEEAFLPPTIDDERVCK 485
Query: 709 EC--------------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQV 748
C S + + ++ HLT F + W+ LI LE +++
Sbjct: 486 RCYALDTCMLYRKAVENVTDTTSPIADTYELKTGHLTATQTEFFKKWEALIALEEQDLVR 545
Query: 749 VKNEIWCSRGSGGNHFTGCLSSIVLDAS------------NEHQKSYRDNRFVYHFVRQH 796
+ E+W + C S++VLD S ++ + R + F Y F R
Sbjct: 546 FRKELWTMGAAEREKAGRCFSNMVLDESFVASDGPSVFSKHDTAAANRIHSFTYRFSR-- 603
Query: 797 MPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSV 856
L S SL+ + GD + +S E LA+A G I ++ V +
Sbjct: 604 -----LADSSTGSLLNGHMSV---------GDAITVSIEPHLLALARGFILHLTPHEVIL 649
Query: 857 SFSKPL-------RLPGRNSSSDADSLLHE-VWRIDKDEIMTSFSVMRYNLVQLFLQSAQ 908
L RL N D+++L+ V+RID+DE+ + +R NL QLF
Sbjct: 650 GVDHELDCSMLRTRLTLLN---DSNTLIDPIVFRIDRDELFSGMGRVRDNLAQLFYAEGD 706
Query: 909 SSQLRRMIVDLEAPRFDSGSVFSQDPAL-SYIWSEKSLNDDQRRAIIKVLTAKDYALILG 967
+++L R++VDL+ PRF G F P + SY +LN +Q+ A+ +VL A+DYAL+LG
Sbjct: 707 TARL-RLVVDLQPPRFIEG--FHLPPEVASYC---VNLNANQQEALQRVLAAEDYALLLG 760
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF--VRIGRHEVVH 1025
MPGTGKT+ + ++ L+ G S+LLTSYT+SAVD +L KLK DF +R+G + VH
Sbjct: 761 MPGTGKTTVIAALIRVLVSMGKSVLLTSYTHSAVDTILRKLKDDC-DFGILRLGNLDKVH 819
Query: 1026 KEIQKHCLSAMNI-NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
++++ LSA ++E+++ +L VVA TCL I
Sbjct: 820 PDVREFTLSAKRAPTTIEQLEFQLMNPPVVATTCLSI----------------------- 856
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
DH AR+ G+EISLFRRLS+ HP+A+ L QYR
Sbjct: 857 -----------------DH---------APARKGGLEISLFRRLSDAHPEAVVDLTYQYR 890
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL-----------SSCSPWLKEALNPC 1193
M IM LSN LIY +RL CG++E+AN + + D S+ WL+ +
Sbjct: 891 MNSDIMTLSNTLIYSNRLHCGNEEVANRSLVLPDTSFVDGLHDNEQSAQQCWLRALVAES 950
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
+FV+TD +PA++++ + N EA L+ ++TQ L+++ + + IGI++ Y Q L
Sbjct: 951 CKAVFVDTDGIPAHDSRVGDLVQNETEASLVYQLTQTLLRSGVREEQIGILSLYRQQIKL 1010
Query: 1254 IRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+ H L +EI T D+ QGRDKDCI++S VRS N L+ DW R+NV+ TRA+
Sbjct: 1011 LSHHLQGHDGIEILTADRSQGRDKDCIIISMVRS--NDAEQVGDLVKDWRRMNVSFTRAR 1068
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
KL++ GS +TL PLLK + IL
Sbjct: 1069 AKLVIFGSRKTLQTTPLLKEFFTLMESNGWIL 1100
>gi|356510400|ref|XP_003523926.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Glycine max]
Length = 336
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/313 (70%), Positives = 254/313 (81%), Gaps = 1/313 (0%)
Query: 1033 LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM 1092
SA N+ VE+IK L+QVKVVAVTCLGI++PLL + +FDVCIMDEAGQTT+PVSLGPL
Sbjct: 6 FSATNVQGVEDIKITLEQVKVVAVTCLGISSPLLANTRFDVCIMDEAGQTTIPVSLGPLT 65
Query: 1093 FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
FAS FVLVGDHYQLPPL S EA E GM I+LF R SE H +AISALQSQYRMCQ I++L
Sbjct: 66 FASTFVLVGDHYQLPPLA-SAEAXECGMGINLFCRFSEAHLEAISALQSQYRMCQEILDL 124
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDH 1212
SNALIYGDRL CGS E ANAK++ S L+ PWL++ LNP RPVIF++TD L A EA+D
Sbjct: 125 SNALIYGDRLRCGSFEAANAKLEFSGLNCGLPWLEDVLNPRRPVIFIDTDKLAALEARDQ 184
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQ 1272
+ +NNP+EA +IA++ +ELVKN I IGIITPYNSQANLIR+ S++S+EIHTIDKYQ
Sbjct: 185 KIVNNPIEAHIIAEVAKELVKNGIGSDHIGIITPYNSQANLIRNDASMTSLEIHTIDKYQ 244
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
R K CILVSFVRS+E P +C +SLLGDWH INVA TRAKKKLIMVGS RTL KVPLLKL
Sbjct: 245 VRLKLCILVSFVRSTETPTSCAASLLGDWHMINVAHTRAKKKLIMVGSRRTLVKVPLLKL 304
Query: 1333 LINKVGEQSGILN 1345
LI KV EQ GIL
Sbjct: 305 LIKKVEEQFGILT 317
>gi|308808322|ref|XP_003081471.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116059934|emb|CAL55993.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1261
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 321/1050 (30%), Positives = 516/1050 (49%), Gaps = 147/1050 (14%)
Query: 397 LNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE--------NNFLIVH 448
L+ +GE + V L W T ++ GD+V++ G D+ + G++ LI+
Sbjct: 217 LHRPNGEAKKVLLKGAWRETPVSEGDSVSLYG-LDETARELAGKDVVEITEGSPIMLILF 275
Query: 449 PDVLVSGTRVAASFSCPRRSVLDERLK--CSERSISALLGTLLHQIFQAGLMKEIP-TMK 505
P L+S T + SF+C R++VL ++++ + S +A +GT++H++ + ++ +
Sbjct: 276 PAYLISATTIGGSFTCLRQTVLQQQVQQTWGDASEAATVGTIMHELAEKAILSAAGRNPE 335
Query: 506 FLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW----------IILFKDSQD 555
+E +++ + +++ +E + + + IP + W L + + D
Sbjct: 336 PMEVTVERMIKSSTNAIFEIDYSEQKLKQRIDNTIPGVQRWAHKLAALSRVTKLPRATPD 395
Query: 556 LN------------------TPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDAS 597
N T V+ G +++ EV DIEE+ WAPK GLKG++D
Sbjct: 396 TNALVRMNRKAAIDKLRNKCTVGVEVPDKG--TVQVDEVVDIEELIWAPKLGLKGILDGV 453
Query: 598 IRVKIESKRNEI-NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLL 656
+ + ++ ++PLE KTGK H AQV LY L++ ERY G+L
Sbjct: 454 ASAVVRERNTDLPKPSVVPLELKTGK----WRDCGHNAQVQLYNLMIGERYGTVSPFGVL 509
Query: 657 YYLQSD-----QTQGVMVQRSDLVGLIMRRNEFA------------NDIIKASTTQ---- 695
+Y SD +++ V + DL LI++RN+ A D+ A +
Sbjct: 510 HYTNSDHDPEGESKLVPLSAKDLGLLILQRNKLAVSLRPTPEAAVKRDVPIAPHGKARLG 569
Query: 696 --QLPPML------------------RAY-GGNKECSGLGNMFDSHIYHLTTAHCSFLRH 734
QLP M RA GGN S LG++F++ HL + LRH
Sbjct: 570 NGQLPEMTPQGWCERCFARDDCFTLHRALEGGNSGTSELGDLFETCTSHLNKKYDDTLRH 629
Query: 735 WDRLIDLEAKEMQVVKNEIW--CSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHF 792
W LIDLE+ E+ + W + + F S V + +++ K D+ + Y F
Sbjct: 630 WLHLIDLESSELLRKRATPWLPVELVNQRDGFAVSEISFVREVTDDLSKG--DDLYYYMF 687
Query: 793 VRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI--- 849
PSPN S I I + D V+LST + + I +
Sbjct: 688 ----RPSPNTPRS-----IVKRIAIR---------DRVVLSTNNGATTICRAQIQNVLAG 729
Query: 850 --SRFHVSVSFSKPLR----------LPGRNSSSDADSLLHEVWRIDKDEI-MTSFSVMR 896
H+ +S +PLR LPG S + D+L WRIDKD +T + R
Sbjct: 730 PGEETHILMSTERPLRINNPNEKLEPLPG---SCEPDAL----WRIDKDGASLTMAARSR 782
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
NL+ LF + ++ RR I+DL+ P F Q ++ + LN +Q A+ K+
Sbjct: 783 GNLLALFYATERAQINRRRIIDLQRPVFSQLGEHKQTMEVALKDVKFPLNAEQVSAVEKI 842
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI-DF 1015
+TA+DY+L+LG PG GKT+T+V A+KAL +G SIL+TS+T+SA+DN+L +L I DF
Sbjct: 843 ITAEDYSLVLGYPGAGKTATLVVAIKALRAQGKSILVTSHTHSAIDNILSRLPDVGITDF 902
Query: 1016 VRIGRHEVVHKEIQKHCLSAMNINSV--EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
+R+G + + +Q + L + + ++++K ++ K+V TC + + K +DV
Sbjct: 903 LRVGEEQKISPTVQPYMLGSERWSCTVSDDMRKISERAKIVGATCYAMGHAFFQRKMYDV 962
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
++DE+GQ TLP L PL A FVLVGDH+QLPPLV S +A E G+ SLF +L E HP
Sbjct: 963 VLIDESGQITLPNILPPLFMAKSFVLVGDHHQLPPLVVSKKAAERGLNKSLFAQLCEAHP 1022
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD----LSSCSPWLKEA 1189
++ L QYRM + + L N L Y +L G++ +A + + +S WL A
Sbjct: 1023 DIVTHLSLQYRMAEPLTRLPNLLTYDGKLRSGTEVVARQMLALEAPRGMYASAPQWLLHA 1082
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
++P +F++T L A + N E L+ + V + ++ ++I ++P+N+
Sbjct: 1083 MDPMNHFVFLDTSALGAAAHETPPPTINEAELSLVLTVVGAFVTHGVDAENICTLSPFNA 1142
Query: 1250 QANLIRHSLS----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
Q + ++ SLS + VE TID+ QGRD D I +SFVRS+E LL D R+N
Sbjct: 1143 QVDAMQASLSGYPALRGVEALTIDRAQGRDMDAICISFVRSNEE--ALAGELLNDERRLN 1200
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
VA+TRAKKKL++VG +TL P+L I+
Sbjct: 1201 VAITRAKKKLVIVGCAKTLRSSPVLGRAID 1230
>gi|403215835|emb|CCK70333.1| hypothetical protein KNAG_0E00650 [Kazachstania naganishii CBS 8797]
Length = 1538
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 309/1054 (29%), Positives = 501/1054 (47%), Gaps = 156/1054 (14%)
Query: 401 SGEERAVHLWEDWFHTVIAPGDTVNVIGE--------FDDQGKCDVGREN-NFLIVHPDV 451
+G +V L W + I D ++VI D G N N LI++PD+
Sbjct: 495 NGRVESVILRHPWVYLDIEEEDIIHVIEGNNFPNKRLLSDDKDSKTGLSNDNLLILNPDI 554
Query: 452 LVSGTRVAASFSCPRRSVLDERLKCS--ERSISALLGTLLHQIFQAGLMKEIP----TMK 505
L+S T + S C R ++ + + E SI +G ++H++ Q+ L ++ + +
Sbjct: 555 LLSATAIGGSIRCLRSGLIGCFFQNTHGEPSIVMTVGNIVHELLQSALKYKLSHSSVSRE 614
Query: 506 FLEEYARLVLQKNIESLYACGVN----ENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
LE +L+ + ++ C + NDI T V+ I +++N F +
Sbjct: 615 ILERKLDEILELYLFAIIICDEDVKQVRNDIIDTHVKNILEIVNK---FTQENNYGCYVS 671
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
G+ + L IS V DIEE W+P G+KG IDA++ + I+P E KTG
Sbjct: 672 ISGTRRTEPLSISNVIDIEENIWSPMLGIKGFIDATVIAHATNSH-----QIVPFEIKTG 726
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
K S+ H AQ ++YTLL+ +RY +D LLYY + + ++M R
Sbjct: 727 KF----KSVAHEAQGLIYTLLLRDRYEIPVDYFLLYYTRETSIMKFPFILHSIKHILMAR 782
Query: 682 NEFANDII----KASTTQQLPPMLRAYGGNKECSGLGNMFDSHI---------------- 721
N+ A+++ + +T+ L L + C N +S I
Sbjct: 783 NKLAHELKYRTREVFSTKLLTLNLPNLSESSYCEVCPNKLESFIISRLLTPEASPETHSS 842
Query: 722 ---YHLTTAHCS--------FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSS 770
Y + T + + F ++ LI E + +E + G S
Sbjct: 843 QEEYLILTEYLNSNIQTYREFFVKYNDLIFKEESSVLCSNSEFFRLDSRTRETQNGLTLS 902
Query: 771 IVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
++ + S D+ F+Y FVR + + + IP + DY+
Sbjct: 903 NLIVSEFAPNPSLLDS-FLYTFVR-------------NPEVASTIPMSS--SRIAPKDYI 946
Query: 831 ILSTESDRLAVASGLITEISRFHVSVSFSKPLR----------------------LPGRN 868
+S ES ++ G + +S ++V+ + L +P N
Sbjct: 947 FVSDESGHFVLSQGEVLHVSDTSITVALKRQLLTNTHYTKNSKTCNNYEQIESVLIPKTN 1006
Query: 869 SSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL----------------------QS 906
S +RIDK+ + S +RYN++ LF+
Sbjct: 1007 EEKLIQSQNTVTYRIDKNNMQQDMSTLRYNVLNLFMPPVVAGGVLTDEKTKKTKVMKASD 1066
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK--SLNDDQRRAIIKVLTAKDYAL 964
S+ R++++D PRF + + P L K + N+DQ+RA+ V KDY+L
Sbjct: 1067 GGDSKTRQLLLDDRKPRF----IPTDRPFLINYDERKVSNFNEDQKRALDHVFRCKDYSL 1122
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVV 1024
ILGMPGTGKT+ + +K G S+LLTSYT+SAVDN+L+KL ++ +R+G + +
Sbjct: 1123 ILGMPGTGKTTVISEMIKVFAANGKSVLLTSYTHSAVDNILLKLLDTDLNIIRLGSNSKI 1182
Query: 1025 HKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPL--LTDKKFDVCIMDEAGQT 1082
+ + Q + + N+ + ++ K +D +VA TCLGI + L L K FD I+DEA Q
Sbjct: 1183 NPKTQCYLPNYENVKTFQDYKDIIDGASIVATTCLGIKDFLFSLRTKDFDYVILDEASQV 1242
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+LPV+LGPL + KF+LVGDHYQLPPLV++ AR G+E SLF+ LSE HP+++ L Q
Sbjct: 1243 SLPVALGPLRYGEKFILVGDHYQLPPLVRNEAARLGGLEDSLFKILSERHPESMVELTFQ 1302
Query: 1143 YRMCQGIMELSNALIYGDRLSCGS---------------DEIANAKIKVSDLSSCSPWLK 1187
YRMC+ I++LSN LIY D++ C + D I +IK +D S+ WL
Sbjct: 1303 YRMCKDIIKLSNLLIYEDKMKCANETVQQQSLSVAENYRDIIGGFRIKAND-STSQDWLC 1361
Query: 1188 EALNPCRPVIFVNTDMLPAY-EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+A+NP V+F++ D P E + N E+ LI + + + + +D+G+++
Sbjct: 1362 DAVNPDNKVVFLDYDNCPGISEVAKGDNITNLGESVLIQLCLEGMFQVGVSCEDVGVMSL 1421
Query: 1247 YNSQANLIRHSLS---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q L++ L+ + +EI T D++QGRDK+C+++S VR ++ SLL + R
Sbjct: 1422 YRAQLRLLKEKLADYENNGLEILTADQFQGRDKECVIISMVRCNDELNG--GSLLRELRR 1479
Query: 1304 INVALTRAKKKLIMVGSCRTLSKV----PLLKLL 1333
+NVA+TRAK KLI+VGS T++ V PL+K +
Sbjct: 1480 VNVAMTRAKSKLIIVGSKTTINSVGEINPLMKFI 1513
>gi|147779373|emb|CAN67853.1| hypothetical protein VITISV_025036 [Vitis vinifera]
Length = 429
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 217/385 (56%), Positives = 261/385 (67%), Gaps = 75/385 (19%)
Query: 374 EVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQ 433
+VSEK AD A+ P KVLRLLNE++GEE+AV+L ++WF++VIAPGDT++VIG+FDDQ
Sbjct: 46 KVSEKREYADLSGAQCPSKVLRLLNEKTGEEQAVYLRDEWFYSVIAPGDTIHVIGKFDDQ 105
Query: 434 GKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIF 493
GKCDV +NNFLIVHPD+LVSGTR
Sbjct: 106 GKCDVDHDNNFLIVHPDILVSGTR------------------------------------ 129
Query: 494 QAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS 553
AGL++EIPT FLEEYAR+V+QKN+ESLYACGVNE+D++KTL+EA P++LNWI LFK+S
Sbjct: 130 -AGLIREIPTKVFLEEYARIVVQKNLESLYACGVNEDDMYKTLIEATPRILNWIXLFKNS 188
Query: 554 QDLNTPTVDFGS-DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
Q+ TVDFGS DGLK++ +SEV DIEEMAWAPKYGLKGMIDAS+R+K ES E+N +
Sbjct: 189 QEYRGATVDFGSDDGLKRVNVSEVIDIEEMAWAPKYGLKGMIDASLRIKFESNTKEVNEI 248
Query: 613 ILPLEFKTGKIPNGQ------------------------SSMEHRAQVILYTLLMSERYL 648
I+PLEFKTGK GQ S+MEH AQVILYTLLMSERYL
Sbjct: 249 IMPLEFKTGKGTKGQASLSSLLKFCVRGISKWDLDYESFSAMEHTAQVILYTLLMSERYL 308
Query: 649 KHIDSGLLYYLQSDQTQ----------GVMVQRSDLVGLIMRRNEFANDIIKASTTQQLP 698
K IDSGLLYYL +B TQ G+ V+RSDLVGLIMRRNE A DI+KAS QQLP
Sbjct: 309 KPIDSGLLYYLNTBHTQYGYIVYQFVKGIAVKRSDLVGLIMRRNELAKDILKASMMQQLP 368
Query: 699 PMLRAYGGNKECSGLGNMFDSHIYH 723
PML++ K C L IYH
Sbjct: 369 PMLQSPSMCKSCXHLNA---CTIYH 390
>gi|408407615|sp|F6QXW0.1|DNA2_XENTR RecName: Full=DNA replication ATP-dependent helicase/nuclease DNA2;
AltName: Full=DNA replication ATP-dependent helicase-like
homolog; Includes: RecName: Full=DNA replication nuclease
DNA2; Includes: RecName: Full=DNA replication
ATP-dependent helicase DNA2
Length = 1048
Score = 404 bits (1039), Expect = e-109, Method: Compositional matrix adjust.
Identities = 328/1047 (31%), Positives = 491/1047 (46%), Gaps = 156/1047 (14%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIG 428
+ VL V E V A+ K L + Q G++ + L +DW I PGD +++ G
Sbjct: 54 YCVLNVKE-------VYAQGEEKHLTITASQEGDDLELCILKDDWVALHIKPGDIIHLEG 106
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGT 487
+ R+ +LI++PD+L+SGT +A C RRSVL E+ K C + S L+GT
Sbjct: 107 NCAFDNTWTISRDTGYLILYPDLLISGTSIANGIRCLRRSVLSEKFKVCDKGSRQMLIGT 166
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLN 545
+LH IFQ + T L+E A + K ++ +Y +N+ D+ + E +P
Sbjct: 167 MLHDIFQRATTRGF-TDSVLQELAHHTVHGPKYLKEMYQLKLNQTDVMGEVQEYLPSFAK 225
Query: 546 WIILFKDSQDLNTPTVDF----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVK 601
W I F + LN ++ D + K+SE DIEE W+P++GLKG ID + RVK
Sbjct: 226 WAIDFM-THPLNQHQINVTRPTAGDPTEATKVSEFLDIEENIWSPRFGLKGKIDVTARVK 284
Query: 602 IESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQS 661
I K ++ + I+PLE KTGK N S+EHR+QV+LYTLL ER + ++GLL YL++
Sbjct: 285 IHQK-SKSHLKIMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGLLLYLKT 339
Query: 662 DQTQGVMVQRSDLVGLIMRRNE---FANDIIKAS-------TTQQLPPMLRAYGGNKECS 711
V R D L+ RNE + +++ S T LP ++ K CS
Sbjct: 340 GNMYSVPGNRLDRRELLKIRNELSYYLTNVVHKSDNGSKEITLASLPALIADRQACKFCS 399
Query: 712 GLGN-----------------------MFDSHIYHLTTAHCSFLRHWDRLIDLE--AKEM 746
+ N + HL H + R W + LE +K+
Sbjct: 400 QMRNCALYSRSVEQQIENCYIPAEMIPVVQKETEHLNKDHLQYFRLWYLMCTLEGNSKDS 459
Query: 747 QVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASD 806
++ + IW S C+ +++ + + D + ++ F R+ P N
Sbjct: 460 KMGRKNIWMMSSSEREEDGQCIGNLIRTGPVQ---TISDGQHLHSFQRKSGTVPATN--- 513
Query: 807 GDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-RLP 865
L SGD V++S E LA++SG I E+ +++ + L +LP
Sbjct: 514 -----------------LMSGDRVVVSGEDKFLALSSGYIKEVKHNNITCILDRSLGKLP 556
Query: 866 GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD 925
+ LL +R+D +E NL +L S S +LR++I+D P F
Sbjct: 557 --------EDLL---FRLDHEEGGGGLESHLGNLSRLMENSPVSDKLRKLIIDFSKPNFV 605
Query: 926 S--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
SV D K LN Q++A+ +VL +KDY LI+GMPGTGKT+T+ V
Sbjct: 606 QHLSSVLPSDAKDIVANILKGLNKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTICTLVST 665
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEE 1043
L ++ + L A G H +H +N+ +
Sbjct: 666 LHLKTCTSCLVDDHREAA-----------------GTHRS-----HRHSKGTVNLGKQKR 703
Query: 1044 IKKRLDQVKVVAVTCLGITNPLLT--DKKFD-------VCIMDEAGQT------------ 1082
+ + C T P ++ +KK VCIM +T
Sbjct: 704 QHRVTSTTSSTSAKCRSKTEPAVSAENKKLQKLISGSHVCIMVNGHKTFSQNNYIIFFDN 763
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEEHPQAISALQS 1141
L + PL + F L+ H V+S RE GM SLF+RL E + +A+ L
Sbjct: 764 ILLLKKLPLHYMCAFALI-HHQCFKGCVKSVSLVRELGMSESLFKRL-ERNQEAVVQLTV 821
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC-----------SPWLKEAL 1190
QYRM IM LSN L+Y RL C SD ++NA +K+ + + S W+K+ L
Sbjct: 822 QYRMNSQIMALSNKLVYEGRLECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIKDVL 881
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
P PV F+NT+ +PA E ++ ++N +EA L+ +T+ +K DIGII PY Q
Sbjct: 882 EPSNPVCFLNTEKIPALETEEKGGISNWIEAKLVFCLTKLFLKAGCRPSDIGIIAPYRQQ 941
Query: 1251 ANLIR---HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
+I +SLS S+VE++T+DKYQGRDK I+VSFVRS+ + + LL DW R+NVA
Sbjct: 942 LKVISNYFNSLSASAVEVNTVDKYQGRDKSVIIVSFVRSNIDGK--LGDLLKDWRRLNVA 999
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
LTRAK KLIM+G TLS+ L+ LI
Sbjct: 1000 LTRAKHKLIMLGCVPTLSRFLCLEQLI 1026
>gi|328720400|ref|XP_001944621.2| PREDICTED: DNA2-like helicase-like isoform 1 [Acyrthosiphon pisum]
Length = 1116
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 312/992 (31%), Positives = 490/992 (49%), Gaps = 138/992 (13%)
Query: 394 LRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVL 452
L L + +S EE HL W H++ GD V V+ + DD V ++ F+ H D L
Sbjct: 180 LTLSSCKSYEEDVCHLSGIWLHSLFEVGDIVFVMAKKVDDYWS--VNSDHGFVTRHSDFL 237
Query: 453 VSGTRVAASFSCPRRSVLDE---RLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
VSGT + S C RRSVL + L CS S ++GTLLHQ+ Q L ++ +F ++
Sbjct: 238 VSGTTIVGSLFCSRRSVLADIYKGLDCS--SAVMVIGTLLHQLLQTVLKRK----QFNQK 291
Query: 510 YARLVLQKNIES------LYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVD 562
+ V+ + I S LY +N K L++ IPK+ N++ D+Q
Sbjct: 292 DIKAVVDEMINSPGFVHTLYESDMNFETTKKELMDFIPKIQNFVRTYLLDNQ-------- 343
Query: 563 FGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
G D + KI + DIE+ W P +G+KG +D ++ + K +P+E KTG
Sbjct: 344 IGKDKRTWQGKIVSIEDIEDNLWVPVFGVKGKVDITVLANYDGKSK-----TMPIELKTG 398
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
+ S EHR QVILYT++M E + +DSGLL YL+ + V V + LIM R
Sbjct: 399 R---ASGSEEHRGQVILYTIMMKELGMD-VDSGLLLYLRENVLTQVKVGHREKRDLIMLR 454
Query: 682 NEF-----ANDIIKASTTQQLPPMLRAYGGNKECSGLGNM--------------FDSH-- 720
N AN I+ +P + + CS + D H
Sbjct: 455 NRLVHYLNANKIVSDPIDDYIPILPEPINHHSACSKCPYLTACSAVLSKEGFEKLDHHNP 514
Query: 721 --------IYHLTTAHCSFLRHWDRLIDLE------AKEMQVVKNEIWC----SRGSGGN 762
I HL + H +++ W + LE + +++W R GN
Sbjct: 515 LKSLGPQAISHLKSEHINYVMQWTAFLQLENSIENTKDNLSAKASDLWTLSYFEREKRGN 574
Query: 763 HFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDC 822
C+S + + + Q NR+ + + + S + ++
Sbjct: 575 ----CISLLKIKNVVKEQ----GNRYYLNTMEKSKKSDKIKHTN---------------- 610
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
+YV++ST + R AVA+G I+ ++ ++V + L G +
Sbjct: 611 -FSLNNYVVVST-NHRNAVATGFISALTETSINVLLDRDLSKLGPTE-----------FH 657
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL-SYIWS 941
+DK E + + +L L S S++LRR I+D E P F S D L S+I S
Sbjct: 658 VDKYESQSMVAFNFSSLALLLEPSENSAKLRRFIIDKEMPSF-----LSSDNHLDSFIKS 712
Query: 942 EK---SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+LN QR AIIK L A +YALI GMPGTGKTST+ ++ L++ G S+L+TS+T+
Sbjct: 713 SGLTLNLNSSQRSAIIKTLAADNYALIKGMPGTGKTSTVAALIRLLVLMGRSVLVTSHTH 772
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC--LSAMNINSVEEIKKRLDQVKVVAV 1056
SAVDNLL+ L IDF+R+G VH ++ + C + + + ++ E++ K +Q +V V
Sbjct: 773 SAVDNLLLLLHKNKIDFLRLGSKARVHPDLWEKCDEVVSQSCDTPEKLSKLYNQANIVGV 832
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
TCLG + LL + FDVCI+DEA Q + L + FVLVGD QLPPL+++ +A+
Sbjct: 833 TCLGCGHALLQKRTFDVCIVDEATQVVQSSVIAALHSSKVFVLVGDPQQLPPLIKNQKAK 892
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
E GM++S+F RL + P + L QYRM I EL+N Y L C +D + A +K+
Sbjct: 893 ELGMDVSMFDRL--DRPSVTAVLHVQYRMNGPIAELANKYTYNGSLQCANDSVKYATLKL 950
Query: 1177 SDLSSCSPWLKEALNP--CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN 1234
++ + W K+ ++ + V+ ++T + + T N +E ++ KI L++
Sbjct: 951 NETNDNDEWCKDIVSSDLDKSVLLLDTGTVYS-----SSTDTNLMEIIVVRKIVLLLIQG 1005
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+ K IG+I PY +Q L+++ ++ S +E++T+D+YQGRDK+ I+ S ++N +
Sbjct: 1006 GLSAKSIGVIAPYRAQVALLKNEMACVHSQIEVNTVDQYQGRDKEVIIYS---CTKNTVS 1062
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+L D RI VA+TRAK KLIM+G T+
Sbjct: 1063 KDVGILSDKRRITVAITRAKHKLIMIGDVTTM 1094
>gi|350592782|ref|XP_003483536.1| PREDICTED: DNA2-like helicase [Sus scrofa]
Length = 841
Score = 401 bits (1031), Expect = e-108, Method: Compositional matrix adjust.
Identities = 277/767 (36%), Positives = 400/767 (52%), Gaps = 95/767 (12%)
Query: 636 VILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----KA 691
++LYTLL ER ++GLL YL++ Q V + D L+ RN+ A + K+
Sbjct: 94 LVLYTLLCQERR-ADPEAGLLLYLKTGQMYPVPAKHLDKRELLRLRNQMAFSLFHRVNKS 152
Query: 692 STTQQ-----LPPMLRAYGGNKECSGLGN-----------------------MFDSHIYH 723
+T ++ LP ++ K CS + N H
Sbjct: 153 ATGEKTKLAPLPQIIEEQQTCKYCSQMANCALYSRAVEQQMDGSAVLTGMLPQIKEETQH 212
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
L H + W ++ LE++ KN IW S C+ +++ EH K
Sbjct: 213 LKPTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEESGSCIGNLI---RTEHVK 269
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-A 840
+ D ++++ F R++ P N L +GD +ILS E L A
Sbjct: 270 TVCDGQYLHTFQRKNGSMPTTN--------------------LMTGDRIILSGEERTLFA 309
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
++ G + E++ V+ L RN S +S L +R+D++E NL
Sbjct: 310 LSRGYVKEMNMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLS 359
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
+L + S +LR +I+D P+F S SV D + K LN QR+A+ KVL
Sbjct: 360 KLMENTYASQKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLL 419
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
+KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F+R+
Sbjct: 420 SKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRL 479
Query: 1019 GRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
G+ + VH +IQK C S +I S+ +++ + +VA TC+GI +P+ + K FD
Sbjct: 480 GQTQKVHPDIQKFTEEEICRSK-SIKSLALLEELYNGQLIVATTCMGINHPIFSRKTFDF 538
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E++
Sbjct: 539 CIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-EQNK 597
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------------S 1181
A+ L QYRM IM LSN L Y +L CGSD++A+A + + L S
Sbjct: 598 NAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVASAVVNLPKLKDVKLELEFYADYS 657
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
+PW+ A P PV F+NTD +PA E + ++N EA L+ +T VK +I
Sbjct: 658 ENPWMVGAFEPNNPVCFLNTDKVPAPEQVEKGGVSNITEAKLVVYLTSIFVKAGCNPCNI 717
Query: 1242 GIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
GII PY Q +I LS SS VE++T+DKYQGRDK ILVSFVRS N LL
Sbjct: 718 GIIAPYRQQLKVINDLLSHSSVGMVEVNTVDKYQGRDKSIILVSFVRS--NRDGTLGELL 775
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
DW R+NVA+TRAK KLI++G +L++ P L L++ + + I++
Sbjct: 776 KDWRRLNVAITRAKHKLILLGCVSSLNRYPPLGKLLDHLNSEKLIID 822
>gi|412992447|emb|CCO18427.1| DNA replication helicase Dna2 [Bathycoccus prasinos]
Length = 1454
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 322/1113 (28%), Positives = 533/1113 (47%), Gaps = 226/1113 (20%)
Query: 405 RAVHLWEDWFHTVIAPGDTVNV--IGEFDD-QGKCDVGRENNF-LIVHPDVLVSGTRVAA 460
+ + L + W + D + V I + ++ G C++ N L++HP++L+S T +
Sbjct: 344 KIITLKDHWVDIQVQVNDLIRVHSISQGNEISGNCEITATNGLILVLHPELLLSATMLGG 403
Query: 461 SFSCPRRSVLDERLK---CSERSISALLGTLLHQIFQAGLMKEIPTM----------KFL 507
SF C R++ ++ + + S +A GTLLH++ + L+ + +
Sbjct: 404 SFQCLRKAFINTVIGDGPGGDASEAATFGTLLHELAEKSLINSGSSAMSNNFAGMNENCM 463
Query: 508 EEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-----------ILFKD---- 552
E++ + +K+ LYA ++ + I + W I+ +D
Sbjct: 464 EDFIVGLARKSALDLYAINKTVDNFIEHARNVISGVEKWSKKLTALSRKARIMARDLGSK 523
Query: 553 ------------------SQDLNTPT----VDFGSDGLKK---LKISEVTDIEEMAWAPK 587
++ N P V+ +G L++SE+ DIEE+ WAP+
Sbjct: 524 MSSANGNDYQIANMREENARRFNQPCGGVHVEVRKNGASNSNVLEVSEIVDIEEIIWAPR 583
Query: 588 YGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERY 647
GLKG IDA +I + + + ++P+E KTGK + +EH AQV+LYTL++ ERY
Sbjct: 584 LGLKGQIDAIAEARIRTGKQSTDVKVVPVELKTGK---WKDVVEHGAQVLLYTLMIGERY 640
Query: 648 LKHIDS---GLLYYLQSDQTQ---GVMVQRSDL-VGLIM-RRNEFAN-----DIIKASTT 694
++ + G+L+Y DQ + +++R++L + +M +RN A+ D +AS
Sbjct: 641 FQNQGASPFGVLHYTNDDQNEEGKTTVIERTNLEIAFLMHQRNRLASALQPRDDDEASLD 700
Query: 695 QQ--------------------------LPPML------RAY-------------GGNKE 709
Q LP M R + GN++
Sbjct: 701 QNRFLYPAENLIERTHLPQVHSKLASGILPNMSPSSWCERCFQRESCFTLHKSLESGNEQ 760
Query: 710 CSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW------CSRGSGGNH 763
SGL +F + H+T +H +L W RL+DLE+ + W CSR GG
Sbjct: 761 TSGL-QIFAASTDHITKSHSEWLNKWIRLVDLESSASHGKRATPWMDVEVVCSR-KGGIA 818
Query: 764 FTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDG----DSLIGAA---IP 816
G + ++H +++ + +L DG DS G + I
Sbjct: 819 VNGL-------------------KLIHHNIQKQI---SLTPEDGTPRRDSFTGVSPGNIV 856
Query: 817 TKDM-------------DCTLRS---GDYVILSTESDRLAVASGLI--TEISRFHVSVSF 858
+D C+L GD V+LS + I EI+ +S+
Sbjct: 857 NEDEWFHEFIVSDNSNEQCSLSKFSPGDRVVLSRNDGLMVTGRATIEKVEINHNMLSLVT 916
Query: 859 SKPLRLPGRNSSSDADSL-----LHEVWRIDKDEIMTSFSVM-RYNLVQLFLQSAQS--- 909
S+PLR+ + S SL L+E+WRID+D + + R NL+ +
Sbjct: 917 SRPLRVQSKEHISIQPSLPGSANLNELWRIDRDGAGHAMAARSRGNLIATLAKDVSQNKN 976
Query: 910 -------SQLRRMIVDLEAPRFDSGSV-------------FSQDPALSYIWSEKSLNDDQ 949
S+ RR I+D P +++ + F +D Y+ LN +Q
Sbjct: 977 QKLMHIPSETRRRIIDFAEPVYENFTSIKLPGRYMNDFAEFERD----YLDIVVDLNAEQ 1032
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
R A+ KV+T DYAL+LG+PG GK+ T+V + L + +L+TS+T++AVDN+L +L
Sbjct: 1033 RYAVEKVVTCSDYALVLGLPGAGKSETLVCCILVLALLEKRVLITSHTHNAVDNILKRLP 1092
Query: 1010 SQSID-FVRIGRHEV-VHKEIQKHCLSA--MNINSVEEIKKRLDQVKVVAVTCLGITNPL 1065
S++ + F+RIG E V KE++++ L + +S + I ++ ++V TC + +P
Sbjct: 1093 SKNCERFIRIGDDEFKVLKEVRRYRLGGEIWDASSFDAINYASEKARIVGATCYALNHPF 1152
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
K+FDV ++DEAGQ TLP LGPL+ + FVLVGDH+QLPPL+ S AR +GME SLF
Sbjct: 1153 FARKEFDVVLVDEAGQLTLPAILGPLLLSKTFVLVGDHHQLPPLITSEVARRSGMEDSLF 1212
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP- 1184
+L ++P A+ +L QYRM + + +L NAL Y +L +D +AN + V +
Sbjct: 1213 AQLCNKNPNAVCSLTCQYRMNEPLTKLPNALTYDGKLKPANDAVANRMLSVEEDFDVKAR 1272
Query: 1185 ---WLKEALN--PCRPVIFVNTDMLPAYEAKDHQTLN----NPVEACLIAKITQELVKNE 1235
WL A + P + VIF++T + + ++ + N E L+ +I + L++ +
Sbjct: 1273 KIQWLTNATSEQPNKAVIFLDTSAEETVQDQTRESSDERPVNKGEQRLVLEIVRSLIRRK 1332
Query: 1236 IEGKDIGIITPYNSQAN----LIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+E I +++P+N+Q + L++ VS VE TIDK QGRD D +++SFV+S NPR
Sbjct: 1333 VEAAKIAVLSPFNAQVDEISELLKTDEKVSDVESLTIDKAQGRDFDAVIISFVKS--NPR 1390
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
T+ LL D R+NVA+TRAK KLI++G+ +TL
Sbjct: 1391 GDTTELLEDKRRLNVAITRAKSKLILIGNMQTL 1423
>gi|383859278|ref|XP_003705122.1| PREDICTED: DNA2-like helicase-like [Megachile rotundata]
Length = 1155
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 293/974 (30%), Positives = 492/974 (50%), Gaps = 121/974 (12%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER-------SISALLGTLLH 490
V + ++++HPD+L+SGT + + C R+++L E+ + E + ++G L H
Sbjct: 217 VDNNSGYIVIHPDLLISGTTIVSGLFCSRKAILAEKFRKIESLPYFKGDQTAIVIGCLAH 276
Query: 491 QIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
Q+ Q ++++I + + E +L+ + I LYA GV + + ++ +PK+ +I
Sbjct: 277 QLLQKAVLQDIHKLSDITELLNCILESKETINMLYAAGVPFDTCKEEMLLFVPKIFKFIQ 336
Query: 549 LF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
+ K ++ + G +I+ + DIEE W PK G+KG +D + V++ S+R
Sbjct: 337 HYLKSNKQEEISNIKDNFQG----RITHIRDIEENIWLPKLGIKGKVDITAEVQMNSRRK 392
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
I+P+E KTGK S+EH+ Q+ILY ++M+ + D+GLL YL+ + Q +
Sbjct: 393 -----IVPIEVKTGK---PSFSLEHKGQIILYIMMMALTG-QDTDTGLLLYLRENSMQII 443
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQ------------QLPPMLRAYGGNKEC--SGL 713
+ LI+ RN AN K T LP + + +C + L
Sbjct: 444 NSGHPERRDLILLRNVLANYFAKPVGTYSNSISDLQWQTLNLPEPINHHSACSKCPYNAL 503
Query: 714 GNMF----------DSH---------IYHLTTAHCSFLRHWDRLIDLE--AKEMQVVKNE 752
+ +SH + +H +++ W L+ +E A+
Sbjct: 504 CCAYLRKDTELQLSESHPLMKLSKQILDKFKPSHINYVLQWISLLQMEQTAQSNDNSMVH 563
Query: 753 IWCSRGSGGNHFTGCLSSI-VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
+W C+ ++ ++ E+ Y + F+R+ S N+ ++ +
Sbjct: 564 LWTLSPDKREMKKACICNLKIIGKVKEYNAKYH-----HTFIRE---SSNIEEAENN--- 612
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
IP + +YV++ST + R+ +++G I IS+ V V + + N S
Sbjct: 613 ---IPYME----FTENEYVLVSTNT-RINISAGFIAHISKNSVVVMLDRDITKYNSNES- 663
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSG---S 928
+ IDK FS+ N+ L ++LR +++D + FD G S
Sbjct: 664 ---------FHIDKYSSSNLFSLNLANVGGLMGDDEICAKLRDIVIDRKPATFDKGVPQS 714
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+ ++ + + LN+ Q+RA++K LTA +Y LI GMPGTGKT T++ ++ L G
Sbjct: 715 IICRNSKILH-----GLNESQQRAVLKALTANNYMLIKGMPGTGKTQTLIALIELLHEIG 769
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC--LSAMNINSVEEIKK 1046
S+L+TS+TNSAVDN+L+KL ++I+F+R+G +H ++ + + ++E+++
Sbjct: 770 QSVLITSHTNSAVDNILLKLLDKNIEFLRLGSSS-IHPSLKSNSERYATAKCCTLEDLET 828
Query: 1047 RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
+ +V VTC G + LL + FDVCI+DE+ QT P +L PL A KFVLVGD QL
Sbjct: 829 AYSK-NIVGVTCYGAHHALLGKRIFDVCIVDESAQTMQPTTLRPLYNARKFVLVGDPDQL 887
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
PP+V+S +AR+ G + SLF RL E+ I L QYRM + IM L+N L Y DRL G+
Sbjct: 888 PPIVKSNQARKLGADESLFVRLDSENNTVI--LTEQYRMNKYIMNLANKLTYNDRLKAGN 945
Query: 1167 DEIANAKI---KVSDLSSCSPWLKEAL--NPCRPVIFVNT----------DMLPAYEAKD 1211
+ I NA ++ +L W+++ + N VI ++T L Y D
Sbjct: 946 NSIENAVFNAGRIENLMKYQSWIQKVVSQNISDSVILIDTGCTNTLKDAHKFLDKYPESD 1005
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKY 1271
QT +N +E +++K+ Q L++ ++ +IGIITPY +Q NL + + +VEI+T+D+Y
Sbjct: 1006 -QTYSNVLEVAILSKLVQTLIEMDVNPNNIGIITPYRAQVNLAKKIIQ-ENVEINTVDQY 1063
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSL--LGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
QGRDK+ I S RSS N L LGD R+ VA+TRAK KLI++ TLS+
Sbjct: 1064 QGRDKEIIFYSCTRSSVKNNNIKEDLEVLGDHRRLTVAVTRAKCKLIIIADKCTLSQYSA 1123
Query: 1330 LKLLINKVGEQSGI 1343
K L + +++ I
Sbjct: 1124 FKKLFELIEDENVI 1137
>gi|270003111|gb|EEZ99558.1| hypothetical protein TcasGA2_TC000140 [Tribolium castaneum]
Length = 1146
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 299/1002 (29%), Positives = 487/1002 (48%), Gaps = 154/1002 (15%)
Query: 393 VLRLLNEQSGEERAVHLWEDW-----FHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
VL L + + GE ++ + W F T GD+V + E + G V + +L+
Sbjct: 203 VLNLKSTKGGETGFCYIEQFWASGNRFKT----GDSVYIKAEKNSNGDWVVNNDTGWLVY 258
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKF 506
PD+L+S T V S C R++VL +R + E + +L GTL H + Q L K++ K
Sbjct: 259 QPDILISCTSVVGSLFCKRKAVLSDRFRGFEPTNRVMLIGTLAHTLLQQSLRKKLTKRKQ 318
Query: 507 LEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFG 564
+E + +L + I+ LY + D+ L +PK+ V F
Sbjct: 319 IEAILKNLLASKDTIKRLYEANLTVADLESDLEVFVPKL-----------------VAFI 361
Query: 565 SDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
S+ + +I ++ DIEE W P+ GLKG ID ++R N ++PLE KTG+
Sbjct: 362 SEHITTGQICDIEDIEENLWCPQLGLKGKIDVTVRS---------NTGVMPLEVKTGR-- 410
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
S+EHR QV+LY L+M ++ + SGLL YL+ + + + +++ RNE
Sbjct: 411 -ATVSLEHRGQVVLY-LMMMNKFGLDVSSGLLLYLKEGVLKEIKATEQEKRDVLILRNEL 468
Query: 685 ANDIIKASTTQQLPPMLRAYGGNKECSGLGNM------FDSH---------------IYH 723
A + AS +LP L ++C+ L + F+ H I H
Sbjct: 469 AYFL--ASDVGELPEPLNNIRVCQKCA-LSTVCSAYLKFEDHDLTENKAMQEVQKKSIGH 525
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIW----CSRGSGGNHFTGCLSSIVLDASN 777
L+ AH + W L+ +EA+ + K+ +I+ R + G + V + +N
Sbjct: 526 LSQAHLDYFLKWSNLLSMEAQHSKTTKSLQQIYTLPPAKREALGRSIVNMRVTFVENETN 585
Query: 778 EHQKSYRDNRFVYHFVRQHMPS-PNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
K H + + PS NL A D + +Y+++ST+S
Sbjct: 586 GLFK---------HTMEKENPSLANLTAYD-----------------IIENNYIVVSTDS 619
Query: 837 DRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
R AVASG +TE+S +S++ + L + RN +++ +D + +F+
Sbjct: 620 -RPAVASGFVTEVSPTQISITLDRDLNVKYRN----------QLFHLDTYDSNITFTFNM 668
Query: 897 YNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQR 950
+LV L S +++QLR +I+D P F P L + ++K LN Q+
Sbjct: 669 TSLVLLIENSERAAQLRSVIIDKAPPTFA--------PKLPSVVAKKGAPILRRLNHVQQ 720
Query: 951 RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
+A++K L A + LI GMPGTGK++T+V ++ L+ S+L+TS+T+SA+DN+ I+L+
Sbjct: 721 KAVLKALCANQFLLIKGMPGTGKSATIVALIQLLIELNKSVLITSHTHSAIDNICIRLQK 780
Query: 1011 QSIDFVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAVTCLGITNPLLTD 1068
++DF+R+G + +++ + + + + EE+ + ++ KV+AVTCLG +PLLT
Sbjct: 781 LNVDFIRLGSESKIDSKLKPNLETTLTEKCTTPEEMNEIYNKYKVIAVTCLGSGHPLLTK 840
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ DVCI+DE+ Q + PL A F+L+GD +QL PLV+ +A E GM SLF RL
Sbjct: 841 RTVDVCIVDESTQVLQTSVIKPLFAAKSFILIGDPHQLAPLVRQRDALEAGMSESLFERL 900
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP---- 1184
E+ + L YRM + I EL+NAL Y +L S+E+AN +K+ +
Sbjct: 901 --ENSEGTITLNLNYRMNKTITELANALTYQGQLQTASEEVANRVLKLPKIEIVKKEYKE 958
Query: 1185 --WLKEALNPCR--PVIFVNTDMLPAYEAKDH--------------QTLNNPVEACLIAK 1226
WL L+ V F++T P E +H Q N E ++
Sbjct: 959 HQWLLNCLDVSLEGAVQFIDTG--PVSELTNHADWITKTVKDGCDLQNCINVYEIAIVVT 1016
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRS 1286
+ + L+ + DIG+I Y +Q + I L V++ T+D++QGRDK I+ S +S
Sbjct: 1017 LVKALILGGVASSDIGVIATYRAQVSQITDLLEKYQVDVSTVDQFQGRDKSVIIYSCTKS 1076
Query: 1287 SENPRNCT--SSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
S T LL D R+ VA+TRAK+KL++VG TL +
Sbjct: 1077 SAQVATNTLKYELLEDKRRLTVAVTRAKRKLLIVGDSSTLVR 1118
>gi|123432021|ref|XP_001308336.1| helicase [Trichomonas vaginalis G3]
gi|121890011|gb|EAX95406.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1050
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 302/1016 (29%), Positives = 485/1016 (47%), Gaps = 153/1016 (15%)
Query: 394 LRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGR------------E 441
+RL ER VHL W + I+ D ++G+++ G VG
Sbjct: 75 VRLWPGLGHSERYVHLRGQWATSSISIADPCFIVGKWE-LGDDPVGNVYQNKYYTIIDDA 133
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRR----SVLDERLKCSERSISALLGTLLHQIFQAGL 497
N F I P VL+SGT +A + C R+ SV ER+ + ++ LL ++F
Sbjct: 134 NGFFISLPHVLISGTEMATAQRCRRQTYINSVCPERISNMDMFRGSICHILLQRVFFGLR 193
Query: 498 MKEIPTM--KFLE--EYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS 553
++I + LE +Y ++++ ES + + + + + +AI N L D
Sbjct: 194 NQDIDHTLDQLLESSKYELFLMEETKESAKSTIIPYLETIRLIADAIETNSNKFTL--DH 251
Query: 554 QDLN---TPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEIN 610
+ N TP G K ++ EE W+ ++GLKG IDA++ E
Sbjct: 252 RLFNGIATPIEALPPYGAKTVQE------EENIWSFQWGLKGKIDATM---------EKE 296
Query: 611 GMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERY-LKHIDSGLLYYLQSDQTQGVMV 669
G++ P E KTG NGQ ++ Q+ Y ++ ERY + GLL+Y++ + +
Sbjct: 297 GIMFPFELKTGSSYNGQVKDDNVLQLSSYIFMLKERYKTQSAPCGLLFYMKDKSSFIIKP 356
Query: 670 QRSDLVGLIMRRNEFANDIIKASTTQQLPP------MLRAYGGNKECSGLGNMFDSHIYH 723
+RS+L+ ++M RN A+ + S +PP + + G K C+ L D +
Sbjct: 357 RRSELLSIVMSRNLIAHSLAHGS----IPPTAGSSHICKYCPGQKICAFLEYDNDCPVKS 412
Query: 724 LTTAHCSF---LRH------WDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD 774
S+ LRH WDRL+ E ++ +IW S
Sbjct: 413 FLNGKLSYTPNLRHREFYNEWDRLLVNEMLNSLDLQTQIWTS------------------ 454
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDS-----LIGAAIPTKDMDCTLRSGDY 829
QK R + NL+ ++G S + + K C +
Sbjct: 455 ---PVQKRISSGRAL----------NNLHTNNGKSPIVTFYLNSGTIEKTQICV---SNI 498
Query: 830 VILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIM 889
V+++ +A G ++ I +++ + + + + ++W E
Sbjct: 499 VLITKNGIPPVIARGNVSAIEGNQITIEMIQ------STMNEEEQDICLDLW-----ESY 547
Query: 890 TSFSVMRYNLVQLFLQSAQSSQ-LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDD 948
+ + R NL+ + + Q + LR I++ ++P VF+ P + I E LN D
Sbjct: 548 NTVTRCRRNLMIMLTEDNQCCENLRNFIIENKSP------VFTSLPKQTNISQENELNHD 601
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
Q AI L A+DY L+LGMPGTGKT+T+ V++ ++L+ SYT++AVDNL KL
Sbjct: 602 QMHAIKMALRAQDYMLLLGMPGTGKTTTLALLVESFEKNNQTVLICSYTHAAVDNLCSKL 661
Query: 1009 KSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
+ ++FVRIGR E + ++++ HCL ++ + + E++ L VKV A TC +P +
Sbjct: 662 IDRGVNFVRIGRLESISEKVRSHCLDSIIESCENTEQLHLSLSGVKVFACTCYAFNHPFI 721
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+K FDVC++DEA Q ++PV +GPL ++F+LVGDHYQLPP+ ++ E + ISLF+
Sbjct: 722 LEKFFDVCVIDEASQISMPVVVGPLTKCNRFILVGDHYQLPPISKN----EGEVPISLFK 777
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS------ 1180
LSE++ AI L++QYRM IM+L N LIY +R+ G A KI ++S
Sbjct: 778 MLSEKNTHAIVTLRTQYRMNNEIMQLCNELIYSNRMRSGFSSSAKNKIYFPNISILNEFS 837
Query: 1181 -SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
W+ L P V+FV+TD +P E K+ + NN E +++ I ++ I +
Sbjct: 838 EYSKEWISRILKPDPSVLFVDTDSVPMREGKNMSSKNNVGEGSVVSMIVSAMILAGISTE 897
Query: 1240 DIGIITPYNSQANLIRHSLS--------------------VSSVEIHTIDKYQGRDKDCI 1279
IG+ITPY +Q IR +L SS+E+ T+DKYQGRDK+CI
Sbjct: 898 SIGVITPYRAQVIFIRKALQAQISCCSKYFPHMAGNPSEIASSIEVDTVDKYQGRDKECI 957
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
++S V+S+E + + DW R+NVA+TRAK KLI VGS TL P + L +
Sbjct: 958 IISTVKSNE--KKSPGAHASDWQRMNVAITRAKTKLIFVGSRSTLENSPFFEHLFD 1011
>gi|390343706|ref|XP_003725947.1| PREDICTED: DNA2-like helicase-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 769
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 275/790 (34%), Positives = 419/790 (53%), Gaps = 113/790 (14%)
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
+PLE KTGK N S+EHR+Q+ILY+L++ + D G L Y+++ + V D
Sbjct: 1 MPLELKTGKETN---SIEHRSQLILYSLMLGDLQPTS-DLGFLLYIKTAAMKAVPANHLD 56
Query: 674 LVGLIMRRNEFANDIIKASTTQQ------------------LPPML----RAYGGNKEC- 710
LI RN+ A + + + + +PP+L R K C
Sbjct: 57 KRELIHLRNQLAYYLSRTARSMTTPTAPSSADWPSQTKPSLIPPILPEPIRDDFSCKRCA 116
Query: 711 -------------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE---AKEMQV 748
S + +F+ I HL +H + HW L LE K+
Sbjct: 117 HLQACSSLHKLEGSSTQLASSVQELFNESIEHLPDSHLQYFAHWYLLCCLEHEATKKRNK 176
Query: 749 VKNEIWCSRGSGGNHFTGCLSSI-VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDG 807
KN IWC + C S + + A+ + Q+S F F R+
Sbjct: 177 SKN-IWCKESTEREKDGECWSHMEFMSATPKDQQS---GGFTLVFRRKQ----------- 221
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTE-SDRLAVASGLITEISRFHVSVSF-SKPLRLP 865
+ G + + D C ++ GD V++S E S R+A+ G I IS+ + +S S+P +
Sbjct: 222 -GIKGFSEASLD-KCFMKGGDRVVISEEGSRRVALCVGFIETISKTDIRISSDSQPKKDG 279
Query: 866 GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD 925
G N V+RIDKD+ S + NL +L + ++LR +++D A
Sbjct: 280 GGN----------PVYRIDKDDSYNSMAASLVNLTKLM--KPEHNKLRNIVIDKRA---- 323
Query: 926 SGSVFSQDPAL------SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
+ Q P L + LN+DQR AI VL ++DY +I+GMPGTGKT+T+V
Sbjct: 324 --TTSVQKPNLPARARGQVATIMRDLNEDQRAAIKAVLRSQDYTVIIGMPGTGKTTTIVA 381
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--N 1037
V+ L+ G S+LLTSYT+SAVDN+L+KL ID +R+G +H E+++ S +
Sbjct: 382 LVRILVACGMSVLLTSYTHSAVDNILLKLLKYKIDILRLGALHNIHPELREFSDSKLMKE 441
Query: 1038 INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKF 1097
+ V ++ ++++ KVVA T LG+ + L T FDVCI+DEA Q + PV LGPL ASKF
Sbjct: 442 ASGVSQLAMQMERKKVVATTSLGMKHALFTRHSFDVCIVDEASQISQPVCLGPLFSASKF 501
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALI 1157
VLVGD QLPPLVQS+ AR+ GM+ SLF+RL H ++++L Q+RM IM +SN ++
Sbjct: 502 VLVGDQCQLPPLVQSSRARDLGMDESLFQRLVSAHTSSVTSLSLQFRMNSEIMSISNHMV 561
Query: 1158 YGDRLSCGSDEIANAKIKVSDL-----SSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
Y + CG+DE+A A + + + SC+ WL++A+NP V F+NTD A+ D
Sbjct: 562 YDGAMRCGNDEVAKATVSLPNWDAWCKESCADAWLEDAVNPSTVVSFLNTDQ--AWSPTD 619
Query: 1212 HQTLNNP--VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-----VSSVE 1264
+ +N +EA L+ +I + L++ IG+I+PY Q L+ +L+ V S+E
Sbjct: 620 AASPSNTNRLEAILVRRIVESLMQAGCTAAQIGVISPYRRQCQLLTSTLADLGSKVKSLE 679
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++T+DKYQGRDKD I++SF S + + S+L D R+NVA+TRAK KL+++GS + L
Sbjct: 680 VNTVDKYQGRDKDVIVMSFSHSQTDSQG--GSILNDLRRLNVAMTRAKHKLLLIGSLKCL 737
Query: 1325 SKV-PLLKLL 1333
S+ P+ KL+
Sbjct: 738 SQFEPVQKLI 747
>gi|156545481|ref|XP_001606961.1| PREDICTED: DNA2-like helicase-like [Nasonia vitripennis]
Length = 1191
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 305/994 (30%), Positives = 494/994 (49%), Gaps = 137/994 (13%)
Query: 413 WFHTVIAPGDTV--NVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVL 470
W +T I PG+ + I E + V + F+I PD LVSGT V + C RRS L
Sbjct: 233 WRYTKIQPGEAIIIKAIKETPEAKHWTVNNNSGFIISQPDTLVSGTSVVGALFCNRRSTL 292
Query: 471 DERLKCSER-------SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN--IES 521
E+ + E + L G+L H++FQ L ++I K + +L+ I+
Sbjct: 293 QEKFRLIESLPHNNVGNNYMLTGSLTHELFQTVLDEKITDAKKISALLDDILKSRNAIQM 352
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEE 581
+Y+ G++ D ++ A+ ++ +I + + TP ++ KI ++ DIEE
Sbjct: 353 MYSAGISRQDCRNLMLPAVGQIHKFIQRYIVGIEPETPDQNYNG------KIEKICDIEE 406
Query: 582 MAWAPKYGLKGMIDASIRVKIESKRNE----INGMILPLEFKTGKIPNGQSSMEHRAQVI 637
W P GLKG ID +I + +N+ + ++PLE KTG+ S EH+ Q+I
Sbjct: 407 NVWLPSLGLKGKIDLTIEISQNKSKNKMFPNVERKVVPLELKTGR---SSFSSEHQGQLI 463
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN------DIIKA 691
LYT++M+E K DSGLL YL+ + + ++ + LI RN A I+K
Sbjct: 464 LYTMMMNETGRKA-DSGLLLYLRENIMREIIGSNNAQRDLITLRNTVAYYSTRQPTIVKT 522
Query: 692 STTQQLPPM-------------------LRAYGGNKECSGLG-----NMFDSHIY-HLTT 726
+ + PM Y +E L D + +LT
Sbjct: 523 KEEESVLPMEFPKPINHRACAQCPYNTLCTTYLTEEEKKELSVSHPLKAIDEKVADYLTQ 582
Query: 727 AHCSFLRHWDRLIDLE--AKEMQVVK-NEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H ++ W L+ +E A+ +V ++W C+S++ L + +E
Sbjct: 583 EHIDYVTKWVSLLQIEEDAENQDLVSWKDVWTLEPLKREKRGSCISNLNLVSVSEI---- 638
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
+ R+++ F R ++NA+D +YVI+ST + R+ V S
Sbjct: 639 -NGRYLHKFQRL-----DINATD-----------------FCENEYVIISTMT-RINVCS 674
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G I +S V+V K + +++ V+ IDK SF V + V
Sbjct: 675 GFIDSVSSETVTVHCDKNITKVYKDT----------VYHIDKSS-FNSFLVQNMSHVGGL 723
Query: 904 LQSAQS-SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE--KSLNDDQRRAIIKVLTAK 960
L ++ SQLR++I++ + F + P++ + + K +N+ Q++AI++ L A
Sbjct: 724 LDDHETCSQLRKIIIERKPATFQT----KLPPSIMEVGEDIFKKINEHQKQAILQALRAD 779
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
+Y LI G PGTGKT T+V ++ LL S+L+T++TN+AVDN+L+KL + IDF+R G
Sbjct: 780 NYLLIKGFPGTGKTQTLVALIELLLKLDKSVLITAHTNTAVDNILLKLIERKIDFIRFGN 839
Query: 1021 HEVVHKEI--------QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFD 1072
H I +HC S ++++V KK VV VTC G T+ L+ +KFD
Sbjct: 840 STKTHPNIAPMLEANVTEHCDSPESLHTVYCSKK------VVGVTCYGATHAHLSRRKFD 893
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+CI+DE+ Q P L PL ASKF+LVGD QLPP+ ++ AR+ GM SLF RL ++
Sbjct: 894 ICIVDESTQVLQPTLLRPLYSASKFILVGDPEQLPPIAKNNTARKLGMNESLFSRLDSKN 953
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---SCSPWLKE- 1188
+ L+ QYRM IM+++N L Y D+L G +++ A + V++++ SC W+++
Sbjct: 954 NAVV--LKLQYRMNSCIMDIANKLTYHDQLQIGCEKVGKATMPVTNIAEFESCEKWIRKT 1011
Query: 1189 -ALNPCRPVIFVNTDMLPAYEAKDHQTL------NNPVEACLIAKITQELVKNEIEGKDI 1241
+L IF+NT Y +TL +N EA +I ++ + L K IE + I
Sbjct: 1012 LSLRLKNSAIFLNTS--ATYHLTLDETLEERKGSSNYWEAAMILRLIEVLKKLGIETQTI 1069
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRS-SENPRNCTSSLLGD 1300
G+I PY Q +L+R + + +E++T+D+YQGRDK I+ S +S S++ + +L D
Sbjct: 1070 GVIAPYRVQVHLLRKVVP-NDIEVNTVDQYQGRDKSVIIYSCSKSISKDTKIQEFDILED 1128
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLL 1333
R+ VA+TRAK KLI++G TL + P KL+
Sbjct: 1129 QQRLTVAVTRAKHKLIIIGDVNTLQRFTPFNKLI 1162
>gi|307188367|gb|EFN73136.1| DNA2-like helicase [Camponotus floridanus]
Length = 1167
Score = 387 bits (994), Expect = e-104, Method: Compositional matrix adjust.
Identities = 301/968 (31%), Positives = 490/968 (50%), Gaps = 113/968 (11%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER--SISA-----LLGTLLH 490
+ N FL+ +PD+L+SGT + + C RR+VL ++ + E S++A +G+L+H
Sbjct: 222 IDNNNGFLVTNPDMLISGTTITSGLFCNRRAVLTDKFRKIESLPSLNADYSVMTVGSLVH 281
Query: 491 QIFQAGLMKEI----PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW 546
Q Q L + I +K L++ L + I+ LY+ ++ D K ++E P++ +
Sbjct: 282 QWLQKALRENICALSDVIKLLDDM--LQSKSTIDYLYSSELSLADCRKRMMEYAPRIFEF 339
Query: 547 IILF-KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK 605
I + KD++ + G KI + DIEE + PK G+KG ID + V I S+
Sbjct: 340 IQHYIKDNEQQRIRDLKNNFQG----KICNIQDIEESVYIPKLGIKGRIDVTAEVNINSR 395
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQ 665
R I+PLE KTG+ S+EH+ QVILY ++M R + ID+GLL YL+ + Q
Sbjct: 396 RK-----IMPLEVKTGR---ASYSLEHKGQVILYLMMMGSRD-QDIDTGLLLYLKENAMQ 446
Query: 666 GVMVQRSDLVGLIMRRNEFANDIIKAS-----------TTQQLPPML------RAYGGNK 708
+ + LI+ RN + K T +LP + R
Sbjct: 447 EIKSSHHEKRDLILLRNTLVHYFSKKPEDHNVDSQSDLKTMELPEPINHPACTRCPYQTL 506
Query: 709 ECSGLG-----NMFDSH---------IYHLTTAHCSFLRHWDRLIDLE-AKEMQVVKNEI 753
C+ L N+ SH + ++H ++ W L+ LE A E + +
Sbjct: 507 CCAYLTKDPNVNLSQSHQLTLPMTQLLNDFESSHLDYVMTWIALLQLEEAYENVNSLSNV 566
Query: 754 WCSRGSGGNHFTGCLSS--IVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLI 811
W C+ + IV + E +D+R+ + F R ++
Sbjct: 567 WTMSAEKREARGTCICNLKIVGEVVME-----QDDRYRHKFARVNIK------------- 608
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
G I + +YVI+ST++ ++ +A+G I +S V+V K + +
Sbjct: 609 GETIDDGTFSSSFTEDNYVIISTDA-KINIAAGHIMHVSHDTVTVLLDKDV------TRQ 661
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSS--QLRRMIVDLEAPRFDSGSV 929
+ADS H IDK T S Y V L + S +LR +++D F
Sbjct: 662 NADSTFH----IDKYSSSTGLSTFNYANVAGLLSNDDESIVKLRCIVIDRIPATFAEKLP 717
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
S A + I S+ LN++Q+RA++K L A +Y LI GMPGTGKT T+V ++ L G+
Sbjct: 718 RSIVSASAKIISD--LNENQQRAVLKALAANEYILIKGMPGTGKTQTLVALIELLQTLGS 775
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI----QKHCLSAMNINSVEEIK 1045
S+L+T++T+SAVDNLL+KL ++IDF+R+G + +H + +++ L++ +S E ++
Sbjct: 776 SVLITAHTHSAVDNLLLKLLERNIDFLRLGSTKQIHPLLTCKSEEYALAS--CDSPESLE 833
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
+ ++V VTCLG + LL + FDVC++DE+ Q P L PL KF+LVGD Q
Sbjct: 834 TLYNSKQIVGVTCLGAYHALLRRRTFDVCVVDESAQIMQPTVLRPLYSTRKFILVGDPDQ 893
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
LPP+V++ A G + SLF RL ++ L QYRM IM L+N + Y +L
Sbjct: 894 LPPIVKNKTAARLGADESLFTRLDSDNNTV--NLLKQYRMNGRIMRLANDVTYHGKLEPA 951
Query: 1166 SDEIANAKIKVSD----LSSCSPWLKEAL--NPCRPVIFVNT----DMLPAYEAKDHQTL 1215
+ ++ NA + ++ LSSC W++ AL N V+ ++T ++ ++ Q
Sbjct: 952 NKQVENATLTGTNMEEMLSSCEGWIRSALSRNVDDSVVVLDTGNTYNLSVESVNRNDQVY 1011
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRD 1275
+N EA +I ++ Q L K + G++IG+I PYN+Q NL++ L VE++T+D+YQGRD
Sbjct: 1012 SNVWEAAVILRLVQALAKAGVCGRNIGVIAPYNAQINLLKKILD-KEVEVNTVDQYQGRD 1070
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
KD IL S +S+E +L D R+ VA+TRA+ KL+++ TL++ K L +
Sbjct: 1071 KDVILYSCTKSTECNTKKEFEILDDQRRLTVAITRARHKLVIISDKMTLTRYTPFKNLFD 1130
Query: 1336 KVGEQSGI 1343
+ E++ I
Sbjct: 1131 VIDEKNVI 1138
>gi|194890272|ref|XP_001977279.1| GG18336 [Drosophila erecta]
gi|190648928|gb|EDV46206.1| GG18336 [Drosophila erecta]
Length = 1100
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 311/1027 (30%), Positives = 503/1027 (48%), Gaps = 147/1027 (14%)
Query: 402 GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAA 460
E HL W + GDTV+++G+++ C V +E + + HPD L+SGT V
Sbjct: 100 AETAVCHLLPPWNGMPMQVGDTVSLLGKWEPSAGCYVVDKEQGYCVSHPDFLISGTTVTG 159
Query: 461 SFSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNI 519
S C R+SVL ER + + S + +GTL+H++ Q L +++ F +++ + LQ+ +
Sbjct: 160 SLFCKRKSVLQERFRGLDSGSSVMVIGTLVHELLQKVLRQKL----FDKKHIQAALQEML 215
Query: 520 ES------LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKI 573
S LYA +++ ++ L++ I +++++ + + TP+V + +++I
Sbjct: 216 TSSSLTHLLYASNLSQVEMKDHLLKFIDPIVSFVAQYVKGE---TPSVLLPE--VHRVRI 270
Query: 574 SEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHR 633
E+ DIEE W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+
Sbjct: 271 HEICDIEENLWVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHK 323
Query: 634 AQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII---- 689
Q++LY L+ S + + SGLL YL+ + V R++ L+M RN+ A+ +
Sbjct: 324 GQLLLYQLMHSAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAHWLTREVA 382
Query: 690 ----KASTTQQLPPMLRAY--------GGNKECSGLGN------MFDSH---------IY 722
K QQLP Y N CS + +SH I
Sbjct: 383 IPAGKEDPLQQLPLPEPVYHHSACGNCAYNTICSSFAQNDASLQLSESHPLKKLMPQLIG 442
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
HL+ A ++++HW L+ LE + + W +R S+ + + +K
Sbjct: 443 HLSEADHAYVQHWCGLLALEEQH----NRQSWQAR------------SLWTEDPAKREKE 486
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAV 841
R R + Q + L A P++D+ + G+YV++S+ S RLAV
Sbjct: 487 GRAVRHLKLVKGQKVVLEEGRYRQSLELGEEADPSRDLSLSGFDLGEYVVISSTS-RLAV 545
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLV 900
ASG I I + + + L + E + +DK E SF+ + NL
Sbjct: 546 ASGFIVSIEARSLDLRLERDL----------SQRYGQETFIMDKHE-SQSFATFNFTNLG 594
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAII 954
L + +LR +IV + P Q L I K LN Q+ A +
Sbjct: 595 MLLSDGERFQELRDIIVAKKPP--------EQHKVLPKIILTKGAPMLLQLNKVQQNAAL 646
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
+ LT + LI G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNLL++L +
Sbjct: 647 RALTTSSHLLIKGLPGTGKTQTLVSLVRLLHLLGKSVLITAQTHSAVDNLLVRLLPFDLP 706
Query: 1015 FVRIGRHEVVHK---EIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKF 1071
+R+G +H EI + L+ + +VE+++K L Q +V VTCLG +PL ++F
Sbjct: 707 MMRLGSSSRIHNQLVEISEDSLTK-DCKTVEDLEKALQQPSIVGVTCLGAGHPLFQRRQF 765
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D CI+DEA Q P L PL+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL +
Sbjct: 766 DYCIVDEATQVLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSREARQRGADETLFQRLDSD 825
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
QA + L QYRM + I L+N L YG L C SDE++ A+ V L+ W++ AL
Sbjct: 826 --QATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFDVDLLNQAPRWVQRALT 883
Query: 1192 PC--RPVIFVNT---------------------DMLPAYEAKDHQTLNNPV--------- 1219
+ V +NT + + +D + P
Sbjct: 884 THLEQAVTLINTGDCLERCQKFVEASQRLVETCSSIEQHFGEDKDEMRKPTTKRRVSKYT 943
Query: 1220 ---EACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGR 1274
EA ++ + + L+K+ E IG+I PY +Q L++ S + +E +T+D++QGR
Sbjct: 944 NYCEAGIVIHLLRYLLKSGFEASRIGVIAPYRAQVELLKKLASKLDTDLECNTVDQFQGR 1003
Query: 1275 DKDCILVSFVRS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
DK I+ S ++ ++ R+ + +L D R+ VA+TRAK KLI++G + L +
Sbjct: 1004 DKSLIIYSCSKTGGGFTDMERSREAEILEDQRRLTVAITRAKNKLILLGDIQCLEQYGPF 1063
Query: 1331 KLLINKV 1337
+ L +
Sbjct: 1064 RRLFKHI 1070
>gi|357631656|gb|EHJ79125.1| hypothetical protein KGM_15469 [Danaus plexippus]
Length = 1157
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 303/1006 (30%), Positives = 497/1006 (49%), Gaps = 132/1006 (13%)
Query: 388 KSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
K P +L V + +W +T + GD V+++ D G+ + L++
Sbjct: 187 KHPQSFEIILKNNVNNRGTVFIEGNWLNTYLQTGDIVSILASRDSSGRFRINNTQGLLVL 246
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKF 506
PD L+S T V + C R++VL ER K S++ +GTL+H++ Q L ++I +
Sbjct: 247 RPDHLISSTSVVSGVFCRRKAVLQERWKGIDSASVTMTIGTLVHEMVQRALTQKISNVPQ 306
Query: 507 LEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
++ +++++IE LY G+ E D+ + L + F + +N +D
Sbjct: 307 IKVLCENIIKESIEMLYDAGITEADVRTNM----QVYLEPLAEFMQTYVVNDKMIDSKKY 362
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
K K+ +V DIEE P+ GLKG IDA+++V I +++++ +PLE K+G+
Sbjct: 363 QWKG-KVEKVLDIEENVCCPQMGLKGKIDATLKVTIHNRKDKTT--TVPLELKSGR---A 416
Query: 627 QSSMEHRAQVILYTLLMSERYLKHID------SGLLYYLQSDQTQGVMV-----QRSDLV 675
S EH Q++LY ++MS L+ D GLL YL+ D+ V +R DLV
Sbjct: 417 SVSAEHTGQLVLYGMMMS--VLEGKDPARGDQRGLLLYLK-DKINITEVNCDYPERRDLV 473
Query: 676 GLIMRRNEFA-------NDIIKASTT---------QQLPPMLRAYGGNKEC--------- 710
M RNE ND + T Q LP + + +C
Sbjct: 474 ---MLRNELVQHLAAGPNDTSQDELTDIEDLGKYHQSLPEPVNHHSACSKCAYLTLCSLH 530
Query: 711 ----------SG--LGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEI---WC 755
SG L + + + HL++ H + W L+ +E K MQ++ + I W
Sbjct: 531 LWHTNGTTVSSGHPLSKLKSTALGHLSSEHIQYFLKWASLLRVEEK-MQLMNSPIHALWT 589
Query: 756 SRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAI 815
+ C ++ L + S + R+++ F+R + L+ G I
Sbjct: 590 DSTDIRSKRGSCAPNLTLS-----RVSSSNGRYLHVFIRNGTKTETLS---GTQYIKGP- 640
Query: 816 PTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADS 875
++GD+ I+S + +R VA+G +T +S SK L++ S
Sbjct: 641 ---------QAGDFSIVSID-NRPWVAAGAVT--------LSDSKELQILLDRDLSLR-L 681
Query: 876 LLHEVWRIDKDEIMTSFSVMRYNLVQLFL---QSAQSSQLRRMIVDLEAPRFDSGSVFSQ 932
+ + ID I S++ NL L L + Q+S+LR++I+D E+P F +
Sbjct: 682 SSNTKYHID---IYESYATTVQNLTNLGLLIEDTHQASKLRKLIIDKESPTFTQ-----K 733
Query: 933 DPALSYIWSEK---SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
P + S++ +LN++Q+ A+++VL DY L+ G+PGTGKT T+ ++ L G
Sbjct: 734 LPPRVHKLSKELLVTLNEEQQAAVLRVLECDDYVLLQGLPGTGKTQTLCALIQLLCSLGM 793
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQ-KHCLSAMNINSVEEIKKRL 1048
+L+T++T+SAVD LL +L S S+ +R+G V K C +VE++
Sbjct: 794 RVLVTAHTHSAVDTLLSRLPS-SLKVLRVGTSSRVSVSAAVKEC------TTVEQLTNLY 846
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPP 1108
+ V+VV VTCLG ++ LL+ FD CI+DEA Q L PL A+KFVLVGD QLPP
Sbjct: 847 NSVQVVGVTCLGASHALLSKNTFDFCIVDEATQVLQSTVLRPLFAANKFVLVGDPEQLPP 906
Query: 1109 LVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDE 1168
+V+S +A+ GME+SLF L ++ + L QYRM Q + +L+N + Y +RL C ++
Sbjct: 907 VVRSRDAKFLGMEVSLFHSLMKD--RTTCTLSLQYRMNQPLADLANKIAYSNRLKCANET 964
Query: 1169 IANAKIKVSDL----SSCSPWLKEALNPCRP---VIFVNTDMLPAYEAKDHQTLNNPVEA 1221
+A A + ++ + SS W+ +P P +F+NT M + +A +TLNN EA
Sbjct: 965 VAKAALNINKMKLSESSSDQWITTVCSP-EPEDAAVFLNTKMELSEDAS--KTLNNKDEA 1021
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILV 1281
++ + + L + I DIG+I PY Q L++ L + VE T+D++QGRDK I+
Sbjct: 1022 VVVLAVIKILKQAGISASDIGVIAPYRDQVTLLKRVLDGTQVEASTVDQFQGRDKSVIIY 1081
Query: 1282 SFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
S R +N R + +L D R+ V++TRAK K I++G+ R L +
Sbjct: 1082 SCTRKDDNLRKVKDNEVLNDKRRLAVSVTRAKHKFIVIGNIRALKR 1127
>gi|380018808|ref|XP_003693313.1| PREDICTED: DNA2-like helicase-like [Apis florea]
Length = 1112
Score = 382 bits (980), Expect = e-102, Method: Compositional matrix adjust.
Identities = 326/1077 (30%), Positives = 508/1077 (47%), Gaps = 163/1077 (15%)
Query: 355 PTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVH------ 408
P D N N C VD K Y L+ +Q + +
Sbjct: 96 PIDSQINFNSLQRCKI--------------VDVKREYNNTLLIVKQDNDYTTCNTTIICL 141
Query: 409 -LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRR 467
W+D V D + +I + + + N FLI+HPD+L+SGT V + C R+
Sbjct: 142 GFWKD----VKIQKDDIVIIQARKENKQWIIDNNNGFLIIHPDILISGTTVVGALFCKRK 197
Query: 468 SVLDERLKCSER-------SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIE 520
++L E+ K E S ++G+L+HQ+ Q + K I + + + +LQ
Sbjct: 198 AILAEKFKKIENLPYFKADQSSIIIGSLVHQLLQKAIQKNIYELSDITKLMDSLLQSKDT 257
Query: 521 S--LYACGVNENDIHK---TLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
S LYA ++ N + T V I + L + K Q +N +F K KI+
Sbjct: 258 SNLLYASQISFNACREQILTFVSKIYEFLQHYVKDKKQQKINNIQDNF------KGKITN 311
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
V DIEE W P GLKG ID ++ VKI SKR I+PLE KTGK P+ S+EH+ Q
Sbjct: 312 VCDIEENIWLPMLGLKGKIDVTVEVKINSKRK-----IMPLEIKTGK-PSF--SLEHKGQ 363
Query: 636 VILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII-----K 690
+ILY ++M+ + D+GLL YL+ + Q + + + LI+ RN AN I K
Sbjct: 364 IILYIIMMTLTR-QDTDTGLLLYLRENVMQEINSKHPEKRDLILLRNSLANYFIPKLVEK 422
Query: 691 ASTTQQ-------LPPMLRAYGGNKECSG--LGNMF----------DSH---------IY 722
++ T + LP + + +C+ L M+ DSH +
Sbjct: 423 SNLTLESDWQTLDLPEPINHHSACSKCTYNVLCCMYLNKDTNIQLSDSHPLIRLGKQILS 482
Query: 723 HLTTAHCSFLRHWDRLIDLE--AKEMQVVKNEIWCSRGSGGNHFTGCLSSI-VLDASNEH 779
+H ++ W L+ +E A+ + + +W C+ ++ ++ E+
Sbjct: 483 KFKPSHIDYISQWVSLLQIEENAQSSENIIRYMWTLSPEKREAKKICICNLKIIGKVIEY 542
Query: 780 QKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
Y+ + F+ V++ + N IP +YV++ST + R+
Sbjct: 543 NSKYK-HTFIRANVKEQFSNTN-------------IPY----MIFSENEYVLISTNT-RI 583
Query: 840 AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNL 899
+++G I + +++ + + N E + IDK + FS N+
Sbjct: 584 NISTGFIAQRKEDSITILLDRDITKYNIN----------EFFHIDKYSSSSLFSFNFANV 633
Query: 900 VQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAI 953
L + +LR +++D + F+ LS+ KS LN +Q+RA+
Sbjct: 634 GGLMGDNEICEKLRNIVIDRKPATFE--------KELSHFVIHKSAKELQDLNKNQQRAV 685
Query: 954 IKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI 1013
+K ++A DY LI GMPGTGKT T+V ++ L G SIL+T++TNSAVDN+L+KL ++ I
Sbjct: 686 LKAISANDYFLIKGMPGTGKTQTLVALIEILHKIGYSILITAHTNSAVDNILLKLLNKDI 745
Query: 1014 DFVRIGR--HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKF 1071
DF+R+G H + + +++ S N +S E ++ ++ VTC G + LL + F
Sbjct: 746 DFLRLGSSVHPSLKYKSEEYVTS--NCHSPESLEAIYTSKNIIGVTCYGAHHVLLGRRIF 803
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D+C++DE+ Q P L PL A KFVLVGD QLPP+++S AR+ G + SLF RL E
Sbjct: 804 DICLVDESAQALQPSILRPLYSAKKFVLVGDPDQLPPIIKSKLARKLGADESLFARLDSE 863
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA---------KIKVSDLSSC 1182
+ L QYRM + IM L+N L Y D L G+ I NA I L
Sbjct: 864 NNTV--NLTKQYRMNKNIMFLANKLTYNDMLEAGNTSIENATFVSPHKNMNIIFQILMKE 921
Query: 1183 SPWLKEAL--NPCRPVIFVNT----------DMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
W+++ L N VI +NT D+ Y D Q +N EA ++ K+ Q
Sbjct: 922 QKWIQKVLSSNINDSVIIINTGCTSKLKVSCDINAKYSESD-QVNSNIWEAIIVLKLVQT 980
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
L+K +IE +IGII PY + NL++ + +T+D+YQGRDK I+ S +S N
Sbjct: 981 LLKMQIELDEIGIIAPYRAHVNLLKKIIIKDIEI-NTVDQYQGRDKQIIIYSCAKSLLNN 1039
Query: 1291 RNCTSSL--LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
++ + LGD R+ VA+TRAK KLI++ RTLS+ K L N V E I+N
Sbjct: 1040 KDIEEDIEVLGDCRRLTVAITRAKCKLIIIADKRTLSQFSAFKKLFNLV-EDKNIIN 1095
>gi|161077698|ref|NP_001096933.1| CG2990, isoform C [Drosophila melanogaster]
gi|158031772|gb|AAF46543.2| CG2990, isoform C [Drosophila melanogaster]
Length = 1099
Score = 381 bits (979), Expect = e-102, Method: Compositional matrix adjust.
Identities = 305/1016 (30%), Positives = 495/1016 (48%), Gaps = 148/1016 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPMQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES------LYAC 525
ER + + S ++GTL+H++ Q L +++ F +++ + LQ+ + S LYA
Sbjct: 171 ERFRGLDSGNSMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLASSSLAHLLYAS 226
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQ--DLNTPTVDFGSDGLKKLKISEVTDIEEMA 583
+ + ++ L++ I +++++ + + + P V G +I E+ DIEE
Sbjct: 227 NLIQVEMEDHLMKFIDPIVSFVAQYVKGEPPSVLLPEVYRG-------QIHEICDIEENL 279
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+
Sbjct: 280 WVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHKGQLLLYQLMH 332
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTTQ 695
S + + SGLL YL+ + V R++ L+M RN+ A + K +
Sbjct: 333 SAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTREVAIPASKEDPLE 391
Query: 696 QLPPMLRAY--------GGNKECSGLGN------MFDSH---------IYHLTTAHCSFL 732
QLP Y N CS + DSH + HL+ A +++
Sbjct: 392 QLPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYV 451
Query: 733 RHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHF 792
+HW L+ LE + N + + S E +K R +
Sbjct: 452 QHWCGLLALEEQH----------------NRQSSHVRSFWTKDPAEREKEGIAIRHLKLV 495
Query: 793 VRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEISR 851
Q + L A P++D+ + G+YV++S+ S RLAVA+G I I
Sbjct: 496 KGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTS-RLAVAAGFIVSIEA 554
Query: 852 FHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSS 910
+ + + L + E + IDK + SF+ + NL L + +
Sbjct: 555 RRLDLRLERDL----------SQRYSEETFIIDKHD-SQSFATFNFTNLGMLLSEGERFQ 603
Query: 911 QLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK------SLNDDQRRAIIKVLTAKDYAL 964
+LR +IV + P Q L I K +LN Q+ A ++ LT + L
Sbjct: 604 ELRDIIVAKKPP--------EQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHLL 655
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVV 1024
I G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNL+++L + +R+G +
Sbjct: 656 IKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSRI 715
Query: 1025 HKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
HK++++ + + +VEE++K L Q +V VTCLG +PL ++FD CI+DEA Q
Sbjct: 716 HKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQV 775
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P L PL+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL E A+ +L Q
Sbjct: 776 LQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLSL--Q 833
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP---------- 1192
YRM + I L+N L YG L C SDE++ A+ +V L+ W++ AL
Sbjct: 834 YRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLIN 893
Query: 1193 -------CRPVIFVNTDMLPA--------YEAKDH----------QTLNNPVEACLIAKI 1227
C+ ++ + ++ E KD N EA ++ +
Sbjct: 894 TGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHL 953
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVR 1285
+ L+K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S +
Sbjct: 954 LRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSK 1013
Query: 1286 S----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+ S+ R+ + +L D R+ VA+TRAK KLI++G + L + + L +
Sbjct: 1014 TGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHI 1069
>gi|119173630|ref|XP_001239227.1| hypothetical protein CIMG_10249 [Coccidioides immitis RS]
Length = 731
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 233/630 (36%), Positives = 353/630 (56%), Gaps = 77/630 (12%)
Query: 750 KNEIWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDG 807
+ E+W S C S++V++ ++ E + NRF Y FV+ H P + ++
Sbjct: 4 RRELWTMLSSEREGVGRCFSNVVIEPGSAFEDTDGPKINRFRYTFVK-HKPFSGFSFAES 62
Query: 808 DSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL----- 862
+ +G+ +++S E A+A+G + +IS ++VS + L
Sbjct: 63 Q---------------ITAGEPIVVSDEKGHFALANGYVVQISSRRLTVSVDRRLHNART 107
Query: 863 RLPGR--------------NSSSDADSLLHE-----VWRIDKDEIMTSFSVMRYNLVQLF 903
++ G N S ADS + E ++R+DKDE + +R NLV +
Sbjct: 108 KVVGFDADRNQSFMGIMEVNDSKLADSRVAEEEEVVLYRVDKDEFSNGMATVRNNLVCMM 167
Query: 904 LQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
S +S +LR +I++ P F S P LS +E +LN DQ+ AI KV++A DY
Sbjct: 168 DNSQFRSKRLRDLIIEGVPPSFKP---LSSVPNLS-ASAEANLNVDQKEAIEKVMSADDY 223
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHE 1022
AL+LGMPGTGKT+T+ ++A++ +G S+LL SYT++AVDN+L+K++ +R+G
Sbjct: 224 ALVLGMPGTGKTTTIAQLIRAIVAQGKSVLLASYTHTAVDNILLKIRYDGTKILRLGVPA 283
Query: 1023 VVHKEIQKHC-LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
VH E+Q+ L+ + S+EEIK ++ +VVA TCLGI + + + FD CI+DEA Q
Sbjct: 284 KVHPEVQQFADLAGIPKKSIEEIKDSIENSQVVATTCLGINHFIFNSRTFDYCIVDEASQ 343
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
TLPV LGP+ A F+LVGDHYQLPPLVQ+ EA E G+++SLF+ L + HP A+ L+
Sbjct: 344 ITLPVCLGPIRMAKTFILVGDHYQLPPLVQNKEALEGGLDVSLFKLLCDMHPGAVVNLEH 403
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS-----CSP------------ 1184
QYRMC+ IM LSN LIY L CG+ E+A+ + + ++S SP
Sbjct: 404 QYRMCEDIMLLSNTLIYFGHLKCGTPEVASRSLNIPNMSGLKQHHISPLSVPSSHTPCLG 463
Query: 1185 ------WLKEALNPCRPVIFVNTDML--PAYEAKDHQTLNNPVEACLIAKITQELVKNEI 1236
WL++ L+P VNTD L A E+ + + N VE L ++ + L+ I
Sbjct: 464 PTRGRCWLRDLLDPSAKARLVNTDFLNPRAGESANGSRIVNVVEVALCNQLVEALISVGI 523
Query: 1237 EGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
++IG++T Y SQ L+R +L + +E+HT D++QGRDK+ I++S VRS N N
Sbjct: 524 PAQEIGVVTLYRSQLALLRQNLRRHLPELEMHTADRFQGRDKEVIIMSCVRS--NAENNV 581
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
LL DW R+NVA TRA+ K ++VGS TL
Sbjct: 582 GELLRDWRRVNVAFTRARTKFLIVGSKTTL 611
>gi|449664309|ref|XP_002170802.2| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2-like
[Hydra magnipapillata]
Length = 774
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 238/673 (35%), Positives = 380/673 (56%), Gaps = 79/673 (11%)
Query: 706 GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAK-EMQVVKNE-IWCSRGSGGNH 763
GN SG+ ++F H+ F + W L+ +E K + Q+ KN+ W
Sbjct: 41 GNANTSGVDSLFMDLTNHINNNQLDFFKKWYELVMIEIKYDEQINKNKYFWLDTSQHCEM 100
Query: 764 FTGCLS--SIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD 821
CLS +IV + QK YH++ + + L+
Sbjct: 101 RGECLSRMNIVREDKTSDQK--------YHYIFCNQSAGLLH------------------ 134
Query: 822 CTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV 880
GD V++S E+ ++ +A+G + ++S +++S + + A + +
Sbjct: 135 --FCCGDRVVVSEENKKVYNIATGYVLDVSGNSITISVDRKI----------ASTQVSST 182
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQ-SAQSSQLRRMIVDLEAPRF--------------- 924
+RIDKD +T++ LV+L+ + S + ++RR+I+D E+P+F
Sbjct: 183 FRIDKDGFLTNYKTSLSTLVKLYKKDSPRDEKIRRLIIDKESPQFAVNKNKELKPSQPFA 242
Query: 925 --DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
+GSV + + + Y+ +LN Q+ AI K L +DY ++LGMPG GK++T+ V+
Sbjct: 243 INGAGSVLNSELSNIYL----NLNPSQKAAIEKCLVTEDYLIMLGMPGAGKSTTIACLVR 298
Query: 983 ALLMRGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLS---AMNI 1038
AL+ G S+LLTSYT+SAVD +L+KL + F+RIG + VH +I H +
Sbjct: 299 ALVSMGKSVLLTSYTHSAVDTILVKLIDAGFNSFLRIGENSRVHSKIA-HLTNKEQTKQF 357
Query: 1039 NSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
+S ++K+ ++ VVA TCLGI +P+ K FD CI+DEA Q TLPV +GPL +A+ F+
Sbjct: 358 SSTAQLKEFYNKQSVVATTCLGIGHPIFLHKCFDYCIVDEASQVTLPVCIGPLRYANAFI 417
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGDH QLPPLVQS ARE G+++SLF L+E HP+A+ +L QYRM IM L+N+LIY
Sbjct: 418 LVGDHNQLPPLVQSPVAREKGLDVSLFCLLTEVHPKAVISLNHQYRMNSDIMLLTNSLIY 477
Query: 1159 GDRLSCGSDEIANAKIKV----SDLSSCSPWLKEALNPCRPVIFVNTDMLPAY-EAKDHQ 1213
+ + CG+D++A+A+IK+ S ++ +A++P R V+F++TD + E+K
Sbjct: 478 NNDMICGNDDVASARIKLPLYEKYKESYRDYILQAMDPVRSVVFIDTDSSEMFRESKSSH 537
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKY 1271
+ N EA L+ I + + ++ ++IG+I+PY Q +IR LSV +VE+ TIDKY
Sbjct: 538 GVTNHGEAFLVRDIVRGFLHCGLKSENIGVISPYRQQLKVIRKELSVLAENVEVDTIDKY 597
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
QG+DK CI+VS VRS+E+ N LL DW R+NVA+TRAK KLI++GS T+ + + +
Sbjct: 598 QGKDKPCIIVSLVRSNES--NEVGDLLTDWRRVNVAITRAKTKLILIGSATTVKQSIIFE 655
Query: 1332 LLINKVGEQSGIL 1344
++ + ++ IL
Sbjct: 656 KMLKILQQEKWIL 668
>gi|323301218|gb|ADX35951.1| RE16268p [Drosophila melanogaster]
Length = 1099
Score = 378 bits (971), Expect = e-101, Method: Compositional matrix adjust.
Identities = 304/1016 (29%), Positives = 493/1016 (48%), Gaps = 148/1016 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPMQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES------LYAC 525
ER + + S ++GTL+H++ Q L +++ F +++ + LQ+ + S LYA
Sbjct: 171 ERFRGLDSGNSMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLASSSLAHLLYAS 226
Query: 526 GVNENDIHKTLVEAIPKMLNWIILFKDSQ--DLNTPTVDFGSDGLKKLKISEVTDIEEMA 583
+ + ++ L++ I +++++ + + + P V G +I E+ DIEE
Sbjct: 227 NLIQVEMEDHLMKFIDPIVSFVAQYVKGEPPSVLLPEVYRG-------QIHEICDIEENL 279
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+
Sbjct: 280 WVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHKGQLLLYQLMH 332
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTTQ 695
S + + SGLL YL+ + V R++ L+M RN+ A + K +
Sbjct: 333 SAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTREVAIPASKEDPLE 391
Query: 696 QLPPMLRAY--------GGNKECSGLGN------MFDSH---------IYHLTTAHCSFL 732
QLP Y N CS + DSH + HL+ A +++
Sbjct: 392 QLPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYV 451
Query: 733 RHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHF 792
+HW L+ LE + N + + S E +K R +
Sbjct: 452 QHWCGLLALEEQH----------------NRQSSHVRSFWTKDPAEREKEGIAIRHLKLV 495
Query: 793 VRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEISR 851
Q + L A P++D+ + G+YV++S+ S RLAVA+G I I
Sbjct: 496 KGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTS-RLAVAAGFIVSIEA 554
Query: 852 FHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSS 910
+ + + L + E + IDK + SF+ + NL L + +
Sbjct: 555 RRLDLRLERDL----------SQRYSEETFIIDKHD-SQSFATFNFTNLGMLLSEGERFQ 603
Query: 911 QLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK------SLNDDQRRAIIKVLTAKDYAL 964
+LR +IV + P Q L I K +LN Q+ A ++ LT + L
Sbjct: 604 ELRDIIVAKKPP--------EQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHLL 655
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVV 1024
I G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNL+++L + +R+G +
Sbjct: 656 IKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSRI 715
Query: 1025 HKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
HK++++ + + +VEE++K L Q +V VTCLG +PL ++FD CI+DEA Q
Sbjct: 716 HKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQV 775
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P L PL+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL E A+ L Q
Sbjct: 776 LQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLIL--Q 833
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP---------- 1192
YRM + I L+N L YG L C SDE++ A+ +V L+ W++ AL
Sbjct: 834 YRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLIN 893
Query: 1193 -------CRPVIFVNTDMLPA--------YEAKDH----------QTLNNPVEACLIAKI 1227
C+ ++ + ++ E KD N EA ++ +
Sbjct: 894 TGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMHL 953
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVR 1285
+ L+K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S +
Sbjct: 954 LRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSK 1013
Query: 1286 S----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+ S+ R+ + +L D R+ VA+TR K KLI++G + L + + L +
Sbjct: 1014 TGGDFSDMERSREAEILEDQRRLTVAITRGKNKLILLGDIKCLEQYGPFRQLFKHI 1069
>gi|24640932|ref|NP_727386.1| CG2990, isoform B [Drosophila melanogaster]
gi|22833065|gb|AAN09623.1| CG2990, isoform B [Drosophila melanogaster]
gi|242118022|gb|ACS78060.1| FI06813p [Drosophila melanogaster]
Length = 1100
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 305/1017 (29%), Positives = 495/1017 (48%), Gaps = 149/1017 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPMQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES------LYA 524
ER + + S + +GTL+H++ Q L +++ F +++ + LQ+ + S LYA
Sbjct: 171 ERFRGLDSGNSVMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLASSSLAHLLYA 226
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKDSQ--DLNTPTVDFGSDGLKKLKISEVTDIEEM 582
+ + ++ L++ I +++++ + + + P V G +I E+ DIEE
Sbjct: 227 SNLIQVEMEDHLMKFIDPIVSFVAQYVKGEPPSVLLPEVYRG-------QIHEICDIEEN 279
Query: 583 AWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLL 642
W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+
Sbjct: 280 LWVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHKGQLLLYQLM 332
Query: 643 MSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTT 694
S + + SGLL YL+ + V R++ L+M RN+ A + K
Sbjct: 333 HSAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTREVAIPASKEDPL 391
Query: 695 QQLPPMLRAY--------GGNKECSGLGN------MFDSH---------IYHLTTAHCSF 731
+QLP Y N CS + DSH + HL+ A ++
Sbjct: 392 EQLPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAY 451
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYH 791
++HW L+ LE + N + + S E +K R +
Sbjct: 452 VQHWCGLLALEEQH----------------NRQSSHVRSFWTKDPAEREKEGIAIRHLKL 495
Query: 792 FVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEIS 850
Q + L A P++D+ + G+YV++S+ S RLAVA+G I I
Sbjct: 496 VKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTS-RLAVAAGFIVSIE 554
Query: 851 RFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQS 909
+ + + L + E + IDK + SF+ + NL L + +
Sbjct: 555 ARRLDLRLERDL----------SQRYSEETFIIDKHD-SQSFATFNFTNLGMLLSEGERF 603
Query: 910 SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK------SLNDDQRRAIIKVLTAKDYA 963
+LR +IV + P Q L I K +LN Q+ A ++ LT +
Sbjct: 604 QELRDIIVAKKPP--------EQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHL 655
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
LI G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNL+++L + +R+G
Sbjct: 656 LIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSR 715
Query: 1024 VHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
+HK++++ + + +VEE++K L Q +V VTCLG +PL ++FD CI+DEA Q
Sbjct: 716 IHKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQ 775
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
P L PL+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL E A+ +L
Sbjct: 776 VLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLSL-- 833
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--------- 1192
QYRM + I L+N L YG L C SDE++ A+ +V L+ W++ AL
Sbjct: 834 QYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLI 893
Query: 1193 --------CRPVIFVNTDMLPA--------YEAKDH----------QTLNNPVEACLIAK 1226
C+ ++ + ++ E KD N EA ++
Sbjct: 894 NTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMH 953
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFV 1284
+ + L+K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S
Sbjct: 954 LLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCS 1013
Query: 1285 RS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
++ S+ R+ + +L D R+ VA+TRAK KLI++G + L + + L +
Sbjct: 1014 KTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHI 1070
>gi|340729548|ref|XP_003403062.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Bombus
terrestris]
Length = 1223
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 301/1022 (29%), Positives = 491/1022 (48%), Gaps = 125/1022 (12%)
Query: 385 VDAKSPYK-VLRLLNEQSGEE-----RAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDV 438
+D + Y +L +N++ E R W+D D + VI + + +
Sbjct: 228 IDVQREYNSILLTVNQEDCETSDTTVRCSDFWKD----AKVQKDDIVVIQARKENNQWII 283
Query: 439 GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER-------SISALLGTLLHQ 491
N FLIV PD L+SGT V+ + C R++VL E+ + E S ++G+L+H+
Sbjct: 284 DNSNGFLIVQPDALISGTTVSGALFCKRKAVLSEKFRKMESLPPFMGDSTPLVIGSLVHE 343
Query: 492 IFQAGLMKEIPTMKFLEEYARLVLQKN--IESLYACGVNENDIHKTLVEAIPKMLNWIIL 549
+ Q + K I + + + +LQ LYA ++ + ++ +PK+ +I
Sbjct: 344 LLQTAIRKNISEVSDITKLMNSILQTTDTCSLLYASNISLETCRQQILPYVPKIREFIQH 403
Query: 550 F---KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKR 606
+ K Q +N +F K +I+++ DIEE W PK GLKG ID S VK+ K+
Sbjct: 404 YLKDKTQQGINNIKNNF------KGRIAQIRDIEENIWLPKLGLKGKIDISAEVKVNCKQ 457
Query: 607 NEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQG 666
I+PLE KTGK S+EHRAQVILY ++M+ + D+GLL YL+ + Q
Sbjct: 458 K-----IMPLEIKTGK---PSFSLEHRAQVILYIMMMTLTG-QDTDTGLLLYLRENNIQE 508
Query: 667 VMVQRSDLVGLIMRRNEFANDIIKASTTQ-------------QLPPMLRAYGGNKECS-- 711
+ + LI+ RN A+ + S+ + LP + + +C+
Sbjct: 509 INSTHPEKRDLILLRNSLASYFVPKSSEKLTNLTSKSDLQMLDLPEPINHHNACSKCTYN 568
Query: 712 GLGNMF---DSHIYHLTT----------------AHCSFLRHWDRLIDLE--AKEMQVVK 750
L M+ DS I T +H ++ HW L+ +E ++ V
Sbjct: 569 TLCCMYLSKDSSIQLSETNPLVELXKKILDKYKPSHIDYVLHWISLLQMEESSQSSNNVM 628
Query: 751 NEIWCSRGSGGNHFTGCLSSI-VLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDS 809
+W C+ ++ V+ + YR + FVR ++ + N +
Sbjct: 629 RYLWTLSPEKREAKKTCICNLKVIGKVTDCDTKYR-----HTFVRSNLDTQFSNIN---- 679
Query: 810 LIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNS 869
IP + +YV++ST + R+ +++G I + +++ + +
Sbjct: 680 -----IPYME----FSDNEYVLVSTNT-RINLSAGFIAQRKENSITLILERDVTKYN--- 726
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV 929
++E + IDK + FS N+ L S +LR +++D + F+ G
Sbjct: 727 -------INEFFHIDKYSSSSLFSGNLANVGGLMSDSEICEKLRDIVIDKKPACFEKGLP 779
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
+ A + I ++LN Q+RA++ ++AK+Y LI GMPGTGKT T+V V+ L G
Sbjct: 780 YPIIKASARIL--QNLNKIQQRAVLMAISAKEYLLIKGMPGTGKTQTIVALVEVLHKLGH 837
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
S+L+TS+TNSAVDN+L+KL ++IDF+R+G + + N N+ ++
Sbjct: 838 SVLITSHTNSAVDNILLKLLHKNIDFLRLGSSTHPSLRHKSEAYATANCNTPSSLEAVYS 897
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
++ VTC G + LL + FDVCI+DE+ Q P L PL A KF+LVGD QLPP+
Sbjct: 898 SKNIIGVTCYGAHHALLGRRMFDVCIVDESTQVLQPTVLRPLYSAKKFILVGDPDQLPPI 957
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+++ AR+ G + SLF RL E+ L QYRM + IM L+N L Y D L G I
Sbjct: 958 IKNKLARKLGADESLFARLDSENNTI--KLTKQYRMNKNIMYLANKLTYNDMLEAGDTSI 1015
Query: 1170 ANAKIKVSD---LSSCSPWLKEALNP--CRPVIFVNT----DMLPAYEAKDHQTLN---- 1216
NA L+ W+++ L+ VI +NT + Y + L+
Sbjct: 1016 ENATFVTPSKEVLTKEEEWIQKVLSSDISDSVIVLNTGCTNKLKENYNLSEKGYLDSDEV 1075
Query: 1217 --NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGR 1274
N EA +++K+ + +K ++IG+I P+ + NL++ ++ +EI+T+D+YQGR
Sbjct: 1076 NSNIWEAVIVSKLVKTFLKVNANLENIGVIAPFRAHVNLLKKVVA-EDIEINTVDQYQGR 1134
Query: 1275 DKDCILVSFVRSSENPRNCTSSL--LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
DKD I+ S +S N + L LGD R+ VA+TRAK KLI++ RT+S+ K
Sbjct: 1135 DKDIIIYSCAKSITNFSDIREDLEVLGDHRRLTVAITRAKHKLIVIADKRTISQYSAFKK 1194
Query: 1333 LI 1334
L
Sbjct: 1195 LF 1196
>gi|30089668|gb|AAP20828.1| LD18775p [Drosophila melanogaster]
Length = 1054
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 303/999 (30%), Positives = 489/999 (48%), Gaps = 149/999 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPMQVGDTVSLLGKWDPSAGCYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES------LYA 524
ER + + S + +GTL+H++ Q L +++ F +++ + LQ+ + S LYA
Sbjct: 171 ERFRGLDSGNSVMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLASSSLAHLLYA 226
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKDSQ--DLNTPTVDFGSDGLKKLKISEVTDIEEM 582
+ + ++ L++ I +++++ + + + P V G +I E+ DIEE
Sbjct: 227 SNLIQVEMEDHLMKFIDPIVSFVAQYVKGEPPSVLLPEVYRG-------QIHEICDIEEN 279
Query: 583 AWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLL 642
W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+
Sbjct: 280 LWVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHKGQLLLYQLM 332
Query: 643 MSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTT 694
S + + SGLL YL+ + V R++ L+M RN+ A + K
Sbjct: 333 HSAQG-RDTQSGLLLYLKEGLLREVASGRNEQRDLLMLRNDLAYWLTREVAIPASKEDPL 391
Query: 695 QQLPPMLRAY--------GGNKECSGLGN------MFDSH---------IYHLTTAHCSF 731
+QLP Y N CS + DSH + HL+ A ++
Sbjct: 392 EQLPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAY 451
Query: 732 LRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYH 791
++HW L+ LE + N + + S E +K R +
Sbjct: 452 VQHWCGLLALEEQH----------------NRQSSHVRSFWTKDPAEREKEGIAIRHLKL 495
Query: 792 FVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEIS 850
Q + L A P++D+ + G+YV++S+ S RLAVA+G I I
Sbjct: 496 VKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTS-RLAVAAGFIVSIE 554
Query: 851 RFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQS 909
+ + + L + E + IDK + SF+ + NL L + +
Sbjct: 555 ARRLDLRLERDL----------SQRYSEETFIIDKHD-SQSFATFNFTNLGMLLSEGERF 603
Query: 910 SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK------SLNDDQRRAIIKVLTAKDYA 963
+LR +IV + P Q L I K +LN Q+ A ++ LT +
Sbjct: 604 QELRDIIVAKKPP--------EQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHL 655
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
LI G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNL+++L + +R+G
Sbjct: 656 LIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPFGLPMMRLGSGSR 715
Query: 1024 VHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
+HK++++ + + +VEE++K L Q +V VTCLG +PL ++FD CI+DEA Q
Sbjct: 716 IHKQLEEISEERLTKDCKTVEELEKALGQPSIVGVTCLGCGHPLFQRRQFDYCIVDEATQ 775
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
P L PL+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL E A+ +L
Sbjct: 776 VLQPTVLRPLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSEKATAVLSL-- 833
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--------- 1192
QYRM + I L+N L YG L C SDE++ A+ +V L+ W++ AL
Sbjct: 834 QYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTLI 893
Query: 1193 --------CRPVIFVNTDMLPA--------YEAKDH----------QTLNNPVEACLIAK 1226
C+ ++ + ++ E KD N EA ++
Sbjct: 894 NTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVMH 953
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFV 1284
+ + L+K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S
Sbjct: 954 LLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCS 1013
Query: 1285 RS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
++ S+ R+ + +L D R+ VA+TRAK KLI++G
Sbjct: 1014 KTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLG 1052
>gi|195481811|ref|XP_002101789.1| GE17824 [Drosophila yakuba]
gi|194189313|gb|EDX02897.1| GE17824 [Drosophila yakuba]
Length = 1098
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 308/1026 (30%), Positives = 500/1026 (48%), Gaps = 147/1026 (14%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAAS 461
E L W + GDTV+++G+++ C V +E + + HPD L+SGT V S
Sbjct: 99 ETAVCQLLPPWNCMPMQVGDTVSLLGKWEPSAGCYVVDKEQGYCVSHPDFLISGTTVTGS 158
Query: 462 FSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIE 520
C R+SVL ER + + S + +GTL+H++ Q L +++ F +++ + LQ+ +
Sbjct: 159 LFCKRKSVLQERFRGLDSGSSVMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLT 214
Query: 521 S------LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
S LYA +++ ++ L++ I +++++ + + TP+V + + +I
Sbjct: 215 SSSLAHLLYASNLSQAEMEDHLLKFIDPIVSFVAQYVKGE---TPSVLLPE--VYRGRIH 269
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+ DIEE W P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+
Sbjct: 270 EICDIEENLWVPQLGLKGKVDVSVKVKNQRQREEI----IPLELKTGR---ASFSMEHKG 322
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII----- 689
Q++LY L+ S + + SGLL YL+ + V R++ L+M RN+ A+ +
Sbjct: 323 QLLLYQLMHSAQG-RDTQSGLLLYLKEGLLREVGSGRNEQRDLLMLRNDLAHWLTREVAI 381
Query: 690 ---KASTTQQLPPMLRAY--------GGNKECSGLGN------MFDSH---------IYH 723
K +QLP Y N C+ + DSH + H
Sbjct: 382 PAGKEDPLEQLPLPEPVYHHSACGNCAYNTICTSFAQKDSSLELSDSHPLKKLMPQLLGH 441
Query: 724 LTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
L+ A ++++HW L+ LE + N + + + +K
Sbjct: 442 LSEADHAYVQHWCGLLALEEQH----------------NRQSSQARCFWTEDPAKREKEG 485
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVA 842
R R + Q + S L A P++D+ + G+YV++S+ S RLAVA
Sbjct: 486 RAIRHLKLVKGQTVVSEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISS-STRLAVA 544
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
SG I I + + + L + D+ + +DK E SF+ + + +
Sbjct: 545 SGFIVSIEARRLDLRLERDL-----SQRYGQDTFI-----MDKHE-SQSFATFNFTNLGI 593
Query: 903 FLQSAQSSQ-LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAIIK 955
L + Q LR +IV + P Q L I K LN Q+ A ++
Sbjct: 594 LLSDGERFQELRDIIVAKKPP--------EQHKVLPKIILTKGAPMLLKLNKVQQNAALR 645
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
LT + LI G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNLL++L +
Sbjct: 646 ALTTSSHMLIKGLPGTGKTQTLVSLVRLLHLLGKSVLITAQTHSAVDNLLMRLLPFDLPM 705
Query: 1016 VRIGRHEVVHKE---IQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFD 1072
+R+G +H + I + L+ + +VEE++K L+Q +V VTCLG + L +KFD
Sbjct: 706 MRLGSSSRIHNQLVGISEDSLTK-DCKTVEELEKALEQPSIVGVTCLGAGHALFQRRKFD 764
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
CI+DEA Q P L L+ SKFVLVGD QLPP+V+S EAR+ G + +LF+RL +
Sbjct: 765 YCIVDEATQVLQPTVLRSLIHCSKFVLVGDPEQLPPIVRSKEARQRGADETLFQRLDSD- 823
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
QA + L QYRM + I L+N L YG L C SDE++ A+ +V LS W++ AL
Sbjct: 824 -QATAVLSLQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVDLLSQAPRWVQRALTT 882
Query: 1193 C--RPVIFVNT--------------------------------DMLPAYEAKDHQT-LNN 1217
+ V +NT D + + +K + N
Sbjct: 883 HLEQAVTLINTGDCMERCQEFVQSSQRLVDTCSSIEQNFGEDKDEIRKHTSKKRVSKYTN 942
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRD 1275
EA ++ + + L+K+ E IG+I PY +Q L++ S + +E +T+D++QGRD
Sbjct: 943 YCEAGIVMHLLRYLLKSGFEAARIGVIAPYRAQVELLKKLASKLDTDLECNTVDQFQGRD 1002
Query: 1276 KDCILVSFVRS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
K+ I+ S ++ S R+ + +L D R+ VA+TRAK KLI++G + L + +
Sbjct: 1003 KNLIIYSCSKTGGDFSNMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFR 1062
Query: 1332 LLINKV 1337
L +
Sbjct: 1063 RLFKHI 1068
>gi|148700123|gb|EDL32070.1| DNA2 DNA replication helicase 2-like (yeast) [Mus musculus]
Length = 998
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 294/487 (60%), Gaps = 24/487 (4%)
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALS 937
V+R+D++E S NL +L + S +LR +I+D P+F + SV D +
Sbjct: 496 VFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDAKDT 555
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
K LN QR+A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT
Sbjct: 556 VANILKGLNKPQRQAMKRVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYT 615
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQK----HCLSAMNINSVEEIKKRLDQVKV 1053
+SAVDN+L+KL + F+R+G+ VH +IQK + +I S+ +++ + +
Sbjct: 616 HSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPI 675
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
VA TC+GI +P+ + K FD CI+DEA Q + PV LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 676 VATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRRFVLVGDHQQLPPLVVNR 735
Query: 1114 EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y +L CGSD +ANA
Sbjct: 736 EARALGMSESLFKRL-ERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAV 794
Query: 1174 IKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
+ + +L S SPWL L P PV F+NTD +PA E ++ ++N EA
Sbjct: 795 LALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEA 854
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDC 1278
LI +T +K DIG+I PY Q +I L SV VE++T+DKYQGRDK
Sbjct: 855 RLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSL 914
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
ILVSFVRS+E+ LL DW R+NVALTRAK KLI++GS +L + P L L + +
Sbjct: 915 ILVSFVRSNED--GTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDHLN 972
Query: 1339 EQSGILN 1345
+ IL+
Sbjct: 973 AEQLILD 979
Score = 144 bits (362), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 66/421 (15%)
Query: 398 NEQSGEERAVH--------------LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENN 443
NE+ EE+ +H L W + PGD V++ G+ + + +
Sbjct: 58 NERGAEEKRLHVTASQDREHEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWI-IDDDFG 116
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIP 502
+ I++PD+++SGT VA+S C RR+VL E + S+ + L+GT+LH++FQ + +
Sbjct: 117 YFILYPDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFA 176
Query: 503 TMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD---SQDLN 557
+ L+E A L+ ++++ +Y +++++I + E +P W F S +
Sbjct: 177 PER-LQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLPSFSKWAEDFMRKGPSSEFP 235
Query: 558 TPTVDFGSDGLKK-----LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGM 612
+ SDG + +++ + DIEE W+P++GLKG ID ++ VKI + ++
Sbjct: 236 QMQLSLPSDGSNRSSPCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKMKYK 294
Query: 613 ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRS 672
++PLE KTGK N S+EHR+QV+LYTLL ER + ++G L YL++ Q V
Sbjct: 295 VMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHL 350
Query: 673 DLVGLIMRRNEFANDII----KASTTQQ-----LPPMLRAYGGNKECSGLGNM------- 716
D L+ RN A ++ +A+ ++ LP ++ K CS +GN
Sbjct: 351 DKRELLKLRNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAV 410
Query: 717 ----------------FDSHIYHLTTAHCSFLRHWDRLIDLE--AKEMQVVKNEIWCSRG 758
HL AH + W ++ LE +K+ + IW +
Sbjct: 411 EEQGDDASIPEAMLSKIQEETRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPA 470
Query: 759 S 759
S
Sbjct: 471 S 471
>gi|328783814|ref|XP_001121355.2| PREDICTED: DNA2-like helicase-like [Apis mellifera]
Length = 1221
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 300/1003 (29%), Positives = 494/1003 (49%), Gaps = 125/1003 (12%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
W + D V +I + + + + FLI+HPD+L+SGT V + C R+++L E
Sbjct: 256 WKDVKVQKNDIV-IIQARKENKQWIIDNNSGFLIIHPDILISGTTVVGALFCKRKAILAE 314
Query: 473 RLKCSER-------SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES--LY 523
+ K E S ++G+L+HQ+ Q + K I + + + +LQ S LY
Sbjct: 315 KFKKLENLPYFKTDQSSIIIGSLVHQLLQKAIQKNIYELSDITKLMDNLLQSKDTSNLLY 374
Query: 524 ACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKKLKISEVTDIE 580
A ++ + + ++ +PK+ ++ + K Q +N +F K +I+ + DIE
Sbjct: 375 ASQISFSACREQILTFVPKIYEFLQHYVKDKKQQKINNMQDNF------KGRITNICDIE 428
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYT 640
E W P GLKG ID ++ VKI SKR I+PLE KTGK S+EH+ Q+ILY
Sbjct: 429 ENIWLPMLGLKGKIDVTVEVKINSKRK-----IMPLEIKTGK---PSFSLEHKGQIILYI 480
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN----DIIKAST--- 693
++M+ + D+GLL YL+ + Q + + + LI+ RN AN +I+ S+
Sbjct: 481 IMMTLTR-QDTDTGLLLYLRENIMQEINSKHPEKRDLILLRNSLANYFTPKLIEKSSLTL 539
Query: 694 -----TQQLPPMLRAYGGNKEC--SGLGNMF----------DSH---------IYHLTTA 727
T LP + + +C + L M+ +SH + +
Sbjct: 540 GSDWQTLDLPEPINHHSACSKCMYNVLCCMYLNKDTNIQLSNSHPLIKLSKQILSKFKPS 599
Query: 728 HCSFLRHWDRLIDLE--AKEMQVVKNEIWCSRGSGGNHFTGCLSSI-VLDASNEHQKSYR 784
H ++ W L+ +E A+ + + +W C+ ++ ++ E+ Y+
Sbjct: 600 HIDYISQWVSLLQIEENAQSNENIIRYMWTLSPEKREAKKICICNLKIIGKVIEYNSKYK 659
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
+ F+ V++ + N IP +YV++ST + R+ +++G
Sbjct: 660 -HTFIRANVKEQFSNTN-------------IPY----MIFSENEYVLISTNT-RINISTG 700
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
I + +++ + + N E + IDK + FS N+ L
Sbjct: 701 FIAQRKEDSITILLDRDITKYNIN----------EFFHIDKYSSSSLFSFNFANVGGLMG 750
Query: 905 QSAQSSQLRRMIVDLEAPRFDSG-SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ +LR +++D + F+ S F + + ++LN +Q+RA++K ++A DY
Sbjct: 751 DNEICEKLRNIVIDRKPATFEKELSDFIIHKSTKEL---QNLNKNQQRAVLKAISANDYF 807
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR--H 1021
LI GMPGTGKT T++ ++ L G SIL+T++TNSAVDN+L+KL ++IDF+R+G H
Sbjct: 808 LIKGMPGTGKTQTLIALIEILHKIGHSILITAHTNSAVDNILLKLLDKNIDFLRLGSSVH 867
Query: 1022 EVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQ 1081
+ + +++ S N +S E ++ ++ VTC G + LL + FD+C++DE+ Q
Sbjct: 868 PSLKYKSEEYVTS--NCHSPESLEAIYSNKNIIGVTCYGAHHALLGRRIFDICLVDESAQ 925
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
P L PL A KFVLVGD QLPP+++S AR+ G + SLF RL E+ L
Sbjct: 926 ALQPSILRPLYSAKKFVLVGDPNQLPPIIKSKLARKLGADESLFARLDSENNTV--NLTK 983
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKI-----KVSDLSSCSPWLKEALNP--CR 1194
QYRM + IM L+N L Y D L G+ I NA ++ L W+++ L+
Sbjct: 984 QYRMNKNIMFLANKLTYNDMLEAGNTSIENAIFFSPHKNMNILMKEQKWIQKVLSSDIND 1043
Query: 1195 PVIFVNT----------DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
VI +NT D+ Y D Q +N EA ++ K+ Q L+K +IE +IGII
Sbjct: 1044 SVIIINTGCTNKLKISCDINTKYLESD-QVNSNIWEAIIVLKLVQTLLKMQIELNEIGII 1102
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL--LGDWH 1302
PY + NL++ + +T+D+YQGRDK I+ S +S N R+ + LGD+
Sbjct: 1103 APYRAHVNLLKKIIIKDIEI-NTVDQYQGRDKQIIIYSCAKSLLNNRDIEEDIEVLGDYR 1161
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+ VA+TRAK KLI++ TLS+ K L N + E I+N
Sbjct: 1162 RLTVAITRAKCKLIVIADKTTLSQFSAFKKLFNLI-EDKNIIN 1203
>gi|149625513|ref|XP_001520571.1| PREDICTED: DNA2-like helicase [Ornithorhynchus anatinus]
Length = 597
Score = 371 bits (953), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 236/603 (39%), Positives = 340/603 (56%), Gaps = 62/603 (10%)
Query: 767 CLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
C+ +I+ EH ++ + + ++ F R++ P N L
Sbjct: 18 CIGNII---RTEHVETVCEGQHLHRFQRKNGTLPKTN--------------------LMV 54
Query: 827 GDYVILSTESDRL-AVASGLITEISRFHVSVSFSKPL-RLPGRNSSSDADSLLHEVWRID 884
GD V++S E L A++SG I +I V+ + L +LPG + + R+D
Sbjct: 55 GDKVVVSGEEKALLALSSGFIKKIDLTTVTCILDRNLSKLPG-----------NTLLRLD 103
Query: 885 KDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSE 942
DE + NL +L S S +LR +I+D P+F SV + +
Sbjct: 104 HDEGIGGIETPLGNLSKLMENSPASEKLRDLIIDFREPQFIQYLSSVLPPEAKDTVATIL 163
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K LN QR+A+ VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVD
Sbjct: 164 KGLNKPQRQAMKHVLLSKDYTLIVGMPGTGKTTTICALVRILYACGFSVLLTSYTHSAVD 223
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVT 1057
N+L+KL + F+R+GR + VH +IQK C S +I S+ +++ + VVA T
Sbjct: 224 NILLKLAKFKVGFLRLGRAQKVHPDIQKFTEEEICRSK-SIKSLASLEELYNSQPVVATT 282
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
C+G+++PL T K+FD CI+DEA Q + PV LGPL F+++FVLVGDH QLPPLV ++EAR+
Sbjct: 283 CMGVSHPLFTRKQFDFCIVDEASQISQPVCLGPLFFSARFVLVGDHQQLPPLVLNSEARD 342
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI--- 1174
GM SLF+RL E++ A+ L QYRM IM LSN L+Y +L CGS+++A A +
Sbjct: 343 LGMSESLFKRL-EQNKNAVVQLTVQYRMNSKIMSLSNKLVYEGKLECGSEKVAKAIVTLP 401
Query: 1175 KVSDLS---------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIA 1225
K D+ S + WLK P V F+NT+ +PA E + ++N EA LI
Sbjct: 402 KFQDVKLNLELYADYSETLWLKGVFEPNNSVCFLNTEKVPAPEQAEKGGVSNIAEAKLIV 461
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKDCILVS 1282
+T +K + DIGII PY Q +I L SS VE++T+DKYQGRDK ILVS
Sbjct: 462 FLTSVFLKAGCKSSDIGIIAPYRQQLKIITDLLMCSSDVMVEVNTVDKYQGRDKSIILVS 521
Query: 1283 FVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
FVR+ N LL DW R+NVA+TRAK KLI++G +L++ P L+ L++ + +
Sbjct: 522 FVRN--NKDGTLGDLLKDWRRLNVAITRAKHKLILLGCVPSLNRYPPLEKLLSHLHSEKM 579
Query: 1343 ILN 1345
I +
Sbjct: 580 IFD 582
>gi|195446960|ref|XP_002071002.1| GK25369 [Drosophila willistoni]
gi|194167087|gb|EDW81988.1| GK25369 [Drosophila willistoni]
Length = 1107
Score = 370 bits (951), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 303/1037 (29%), Positives = 497/1037 (47%), Gaps = 174/1037 (16%)
Query: 408 HLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPDVLVSGTRVAASFSCPR 466
HL W T ++ GD +++ G++ G + +++ + ++HPD+L+SGT V S C R
Sbjct: 108 HLQTPWNQTALSTGDLISLQGQWQPSLGAYVINQDHGYCVIHPDLLISGTTVTGSLFCRR 167
Query: 467 RSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES---- 521
++VL ER + + + + +GTL+H++ + L +++ Y +QK +E+
Sbjct: 168 KAVLQERFRGLDAGNAVMVIGTLVHELLEKVLSQKL--------YNADQIQKALENMFSS 219
Query: 522 ------LYACGVNENDIHKTLVEAIPKMLNWIILF-KDSQDLNTPTVDFGSDGLKKLKIS 574
LYA ++ D+ + L + + +L ++ + K Q P F + +I
Sbjct: 220 PSLTSMLYAGRLSLGDLEQQLHQYVEPILAFVQQYMKGIQPSVMPHNTF------RGRIE 273
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
++ DIEE W P+ GLKG +D S+R+ + + +PLE KTG+ SMEH+
Sbjct: 274 QIHDIEENLWVPQLGLKGKVDVSVRLAKQKQP-------IPLELKTGR---ASFSMEHKG 323
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK---- 690
Q++LY ++ S + + +GLL YL+ Q + +R D LI RNE A+ + +
Sbjct: 324 QLMLYQMMQSAQG-RETKTGLLLYLREGLMQEIRGERKDQRSLIWLRNELAHYLTRQVQF 382
Query: 691 --------ASTTQQLPPMLRAYGGNKECSG----------------------LGNMFDSH 720
AS+ QLP + + + C+ L +
Sbjct: 383 PEDGNEHSASSVFQLPEPIYHHKACENCAYNTICCSFAQREASQLQLAEDHPLSVLMPKV 442
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQ--VVKNEIWCSRGSGGNHFTGCLSSIVLDASNE 778
+ HLT A S++ HW L+ LE + + + N +W L + +
Sbjct: 443 LGHLTEADQSYVMHWCGLLGLEEQHSRQSIQVNALWT---------MSSLKRQKQGRAID 493
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS---GDYVILSTE 835
H K D + +Y R L+ D AI +D TL G+YVI+S
Sbjct: 494 HLKLVPDQKVIYEEGRYSQSLALLDHKD-------AI----LDLTLSGFDVGEYVIVSCH 542
Query: 836 SDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVM 895
S RLA+A+G I ++ +++ + L + E++ +DK E SFS
Sbjct: 543 S-RLAIAAGHIISLTSHRLTLQLERDL----------SQLYAGEIFIMDKHE-SQSFSTF 590
Query: 896 RY-NLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE-----KSLNDDQ 949
Y NL L + +LR +++ + P + P L I +E SLN Q
Sbjct: 591 NYTNLGLLISPGERYDELRSIVIARDPP-----TEHKVLPRL--ILTEGADILASLNKVQ 643
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
+ A ++ LT Y LI G+PGTGKT T+V V+ L + G S+++T+ T+SAVDNLL++L
Sbjct: 644 KSAALRALTTNSYRLIKGLPGTGKTQTLVALVRLLHLLGRSVIVTAQTHSAVDNLLLRLM 703
Query: 1010 SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
++ +R+G +H +++ S + + SVE++ L++ +V VTCLG +P+
Sbjct: 704 PYNLPMIRLGSRSRLHHQLESISESKLTADCKSVEQLTAALEKPSIVGVTCLGANHPMFQ 763
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
++FD CI+DEA Q P L LM +FVLVGD QLPP+V+S EAR+ G + +LFRR
Sbjct: 764 HRQFDYCIVDEATQVLQPTVLRVLMHCKRFVLVGDPEQLPPIVRSLEARQRGADETLFRR 823
Query: 1128 L-SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-DLSSCSPW 1185
L S E A+ L QYRM + I L+N L YG L C D++ANA++++ L S W
Sbjct: 824 LDSGEKTTAVLTL--QYRMNRTITRLANQLTYGQALKCADDQVANARLQLKVSLPVASKW 881
Query: 1186 LKEALNPC--RPVIFVNT----DMLPAYEAKDHQTL------------------------ 1215
+ AL + VI ++T D Y AK + L
Sbjct: 882 VHRALQSHLEQAVILMDTQDCSDRCHEY-AKGSKKLGETCSSIEQHYGEGQSEDTKRSKR 940
Query: 1216 -----NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTI 1268
N EA ++ + ++L+ + +G+I PY +Q L+R + ++E +T+
Sbjct: 941 RQSKYTNYCEAAIVMHLLRQLLAIGYDANRLGVIAPYRAQVELLRKLGNALDQNIEFNTV 1000
Query: 1269 DKYQGRDKDCILVSFVRSSENP--------RNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
D+YQGRDKD I+ S ++ P R+ S +L D R+ VA+TRAK KLI++G
Sbjct: 1001 DQYQGRDKDLIIYSCAKTGAIPLDGNEQMERSRESEILEDQRRLTVAITRAKHKLIILGD 1060
Query: 1321 CRTLSKVPLLKLLINKV 1337
+ L + K L +
Sbjct: 1061 VKCLERYGPFKRLFEHI 1077
>gi|149043918|gb|EDL97369.1| rCG60675 [Rattus norvegicus]
Length = 991
Score = 369 bits (948), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 217/496 (43%), Positives = 299/496 (60%), Gaps = 25/496 (5%)
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS 926
RN S+ ++ L +R+D++E + NL +L + S +LR +I+D + P+F +
Sbjct: 484 RNLSTLPETTL---FRLDREEKHGDINTPLGNLSKLMENTDSSKRLRELIIDFKEPQFIA 540
Query: 927 --GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
SV D + K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L
Sbjct: 541 YLSSVLPHDAKDTVANILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICALVRIL 600
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM----NINS 1040
G S+LLTSYT+SAVDN+L+KL I F+R+G+ VH +IQK M +I S
Sbjct: 601 SACGFSVLLTSYTHSAVDNILLKLAKFKIGFLRLGQSHKVHPDIQKFTEEEMCRLRSIAS 660
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
+ +++ + VVA TC+GI++P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLV
Sbjct: 661 LAHLEELYNSHPVVATTCMGISHPMFSRKTFDFCIVDEASQISQPICLGPLFFSRRFVLV 720
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDH QLPPLV + EAR GM SLF+RL E + A+ L QYRM + IM LSN L Y
Sbjct: 721 GDHKQLPPLVLNREARALGMSESLFKRL-ERNESAVVQLTIQYRMNRKIMSLSNKLTYEG 779
Query: 1161 RLSCGSDEIANAKIKVSDLS----------SCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
+L CGSD +ANA I + +L S +PWL P PV F+NTD +PA E
Sbjct: 780 KLECGSDRVANAVITLPNLKDVRLEFYADYSDNPWLAGVFEPDNPVCFLNTDKVPAPEQI 839
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHT 1267
++ ++N EA LI +T +K DIGII PY Q I L SV VE++T
Sbjct: 840 ENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGIIAPYRQQLRTITDLLARSSVGMVEVNT 899
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+DKYQGRDK ILVSFVRS+E+ LL DW R+NVA+TRAK KLI++GS +L +
Sbjct: 900 VDKYQGRDKSLILVSFVRSNED--GTLGELLKDWRRLNVAITRAKHKLILLGSVSSLKRF 957
Query: 1328 PLLKLLINKVGEQSGI 1343
P L+ L + + + +
Sbjct: 958 PPLEKLFDHLNAEQNL 973
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 197/405 (48%), Gaps = 52/405 (12%)
Query: 400 QSGEERAVHLWED-WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRV 458
Q GE+ + + + W + PGD +++ G+ + V + + I+ PD+L+SGT V
Sbjct: 73 QEGEQEVLCILRNGWSSVPVEPGDIIHIEGDCTSEPWI-VDDDFGYFILSPDMLISGTSV 131
Query: 459 AASFSCPRRSVLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ- 516
A+S C RR+VL E + S+ + L+GT+LH++FQ + + K L+E A L+
Sbjct: 132 ASSIRCLRRAVLSETFRVSDTATRQMLIGTILHEVFQKAISESFAPEK-LQELALQTLRE 190
Query: 517 -KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKD--------SQDLNTPTVDFGSDG 567
++++ +Y ++++++ + E +P W F L+ P+
Sbjct: 191 VRHLKEMYRLNLSQDEVRCEVEEYLPSFSKWADEFMHKGTKAEFPQMHLSLPSDSSDRSS 250
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+++ + DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N
Sbjct: 251 PCNIEVVKSLDIEESIWSPRFGLKGKIDVTVGVKIH-RDCKTKYKIMPLELKTGKESN-- 307
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
S+EHR QVILYTLL ER + ++G L YL++ Q V D L+ RN+ A
Sbjct: 308 -SIEHRGQVILYTLLSQERR-EDPEAGWLLYLKTGQMYPVPANHLDKRELLKLRNQLAFS 365
Query: 688 II----KASTTQQ-----LPPMLRAYGGNKECSGLGN----------MFDSHI------- 721
++ +A+ ++ LP ++ K CS +GN + D+ I
Sbjct: 366 LLHRVSRAAAGEEARLLALPQIIEEEKTCKYCSQMGNCALYSRAVEQVHDTSIPEGMRSK 425
Query: 722 -----YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGS 759
HLT AH + W ++ LE++ K+ IW + S
Sbjct: 426 IQEGTQHLTRAHLKYFSLWCLMLMLESQSKDTKKSHQSIWLTPAS 470
>gi|350411710|ref|XP_003489429.1| PREDICTED: DNA2-like helicase-like [Bombus impatiens]
Length = 1256
Score = 367 bits (943), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 299/996 (30%), Positives = 483/996 (48%), Gaps = 119/996 (11%)
Query: 405 RAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSC 464
R W+D D + VI + + + + FLIV PD L+SGT V+ + C
Sbjct: 287 RCSGFWKD----AKVQKDDIVVIQARKENNQWIIDNSSGFLIVQPDALISGTTVSGALFC 342
Query: 465 PRRSVLDERLKCSER-------SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
R++VL E+ + E S ++G+L+H++ Q + K I + + +LQ
Sbjct: 343 KRKAVLSEKFRKMESLPPFMGDSTPLVIGSLVHELLQTAIRKNISEVSDITMLMNSILQT 402
Query: 518 N--IESLYACGVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLKKLK 572
LYA ++ + ++ +PK+ +I + K Q +N +F K +
Sbjct: 403 TDTCSLLYASKISLETCRQQILPYVPKIREFIQHYLKDKMQQGINNIKNNF------KGR 456
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
I+++ DIEE W PK GLKG ID S VK+ K+ I+PLE KTGK P+ S+EH
Sbjct: 457 IAQIRDIEENIWLPKLGLKGKIDISAEVKVNCKQK-----IMPLEIKTGK-PSF--SLEH 508
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAS 692
RAQVILY ++MS + D+GLL YL+ + Q + + LI+ RN A+ + S
Sbjct: 509 RAQVILYIMMMSLTG-QDTDTGLLLYLRENNIQEINSSHPEKRDLILLRNSLASYFVPKS 567
Query: 693 TTQ-------------QLPPMLRAYGGNKECS--GLGNMF---DSHIYHLTT-------- 726
+ + LP + + +C+ L M+ DS I T
Sbjct: 568 SEKLSNLTSKSDLQMLDLPEPINHHNACSKCTYNTLCCMYLSKDSSIQLSETNPLVELGK 627
Query: 727 --------AHCSFLRHWDRLIDLE--AKEMQVVKNEIWCSRGSGGNHFTGCLSSI-VLDA 775
+H ++ HW L+ +E ++ V +W C+ ++ V+
Sbjct: 628 KILDKYKPSHIDYVLHWISLLQMEESSQSSNNVTRYLWTLSPEKREAKKTCICNLKVIGK 687
Query: 776 SNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTE 835
+ YR + FVR ++ + N + IP + +YV++ST
Sbjct: 688 VTDCDTKYR-----HTFVRSNLDTQFSNIN---------IPYME----FSDNEYVLVSTN 729
Query: 836 SDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVM 895
+ R+ +++G I + R S++ + N ++E + IDK + FS
Sbjct: 730 T-RINLSAGFIAQ--RKEDSITLILERDVTKYN--------INEFFHIDKYSSSSLFSGN 778
Query: 896 RYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
N+ L S +LR +++D + F+ G + A + I ++LN Q+RA++
Sbjct: 779 LANVGGLMSDSEICEKLRDIVIDKKPACFEKGLPYPIIKASARIL--QNLNKIQQRAVLM 836
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
++AK+Y LI GMPGTGKT T+V V+ L G S+L+TS+TNSAVDN+L+KL + IDF
Sbjct: 837 AISAKEYLLIKGMPGTGKTQTVVALVEVLHKLGHSVLITSHTNSAVDNILLKLLHKDIDF 896
Query: 1016 VRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
+R+G + + + N+ ++ ++ VTC G + LL + FDVCI
Sbjct: 897 LRLGSSTHPSLRHKSEAYATADCNTPSSLETVYSSKNIIGVTCYGAHHALLGRRTFDVCI 956
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DE+ Q P L PL A KF+LVGD QLPP++++ AR+ G + SLF RL E+
Sbjct: 957 VDESTQVLQPTVLRPLYSAKKFILVGDPDQLPPIIKNKLARKLGADESLFARLDSENNTI 1016
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD---LSSCSPWLKEALNP 1192
L QYRM + IM L+N L Y D L G I NA L+ W+++AL+
Sbjct: 1017 --KLTKQYRMNKSIMYLANKLTYNDMLEAGDTSIENATFVTPSKEVLTKEEEWIQKALSS 1074
Query: 1193 --CRPVIFVNT----DMLPAYEAKDHQTLN------NPVEACLIAKITQELVKNEIEGKD 1240
+I +NT + Y + L+ N EA +++K+ + +K + ++
Sbjct: 1075 DISDSIIVLNTGCTNKLKENYNLSEKGYLDSDEVNSNIWEAVIVSKLVKTFLKVNAKLEN 1134
Query: 1241 IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL--L 1298
IGII P+ + +L++ ++ +EI+T+D+YQGRDK+ I+ S +S N + L L
Sbjct: 1135 IGIIAPFRAHVSLLKKVVA-EDIEINTVDQYQGRDKEIIIYSCAKSITNFSDIREDLEVL 1193
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
GD R+ VA+TRAK KLI+V RT+S+ K L
Sbjct: 1194 GDHRRLTVAITRAKHKLIVVADKRTISQYSAFKKLF 1229
>gi|195350587|ref|XP_002041821.1| GM11399 [Drosophila sechellia]
gi|194123626|gb|EDW45669.1| GM11399 [Drosophila sechellia]
Length = 1100
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 302/1018 (29%), Positives = 499/1018 (49%), Gaps = 151/1018 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E+ + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPVQVGDTVSLLGKWDPSAGCYVVDKEHGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES------LYA 524
ER + + S + +GTL+H++ Q L +++ F +++ + LQ+ + S LYA
Sbjct: 171 ERFRGLDCGNSVMVIGTLVHELLQKVLRQKL----FDKKHIQSALQEMLASSSLAHLLYA 226
Query: 525 CGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAW 584
+ + ++ L++ I +++++ + + TP+V + + +I E+ DIEE W
Sbjct: 227 SNLRQVEMEDHLMKFIDPIVSFVAQYVKGE---TPSVLLPE--VYRGRIHEICDIEENLW 281
Query: 585 APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMS 644
P+ GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+ S
Sbjct: 282 VPQLGLKGKVDVSVKVKNQRQREEI----VPLELKTGR---ASFSMEHKGQLLLYQLMHS 334
Query: 645 ERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTTQQ 696
+ + SGLL YL+ + V R++ L+M RN+ A + K +Q
Sbjct: 335 AQG-RDTQSGLLLYLKEGLLKEVASGRNEQRDLLMLRNDLAYWLTREVAIPAGKEDPVEQ 393
Query: 697 LPPMLRAY--------GGNKECSGLGN------MFDSH---------IYHLTTAHCSFLR 733
LP Y N CS + DSH + HL+ A ++++
Sbjct: 394 LPLPEPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQ 453
Query: 734 HWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFV 793
HW L+ LE + + + S +F + + K ++ R + H
Sbjct: 454 HWCGLLALEEQHNR---------QSSHARYFW----------TEDPAKREKEGRAIRHLK 494
Query: 794 RQHMPSPNLNAS---DGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEI 849
+ L L A ++D+ + G+YV++S+ S RLAVA+G I +
Sbjct: 495 LVKVQEVVLEEGRYRQTLELGEEADRSRDLSLSGFGVGEYVVISSTS-RLAVAAGYIVSM 553
Query: 850 SRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQ 908
+ + + L + E + IDK + SF+ + NL L + +
Sbjct: 554 EARRLDLRLERDL----------SQRYSQEGFIIDKHD-SQSFATFNFTNLGMLLSEGER 602
Query: 909 SSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAIIKVLTAKDY 962
+LR +IV + P Q L I K LN Q+ A ++ LT +
Sbjct: 603 FQELRDIIVAKKPP--------EQHKVLPKIILTKGASMLLKLNKVQQNAALRALTTSSH 654
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHE 1022
LI G+PGTGKT T+V V+ L + G S+L+T+ T+SAVDNLL++L + +R+G
Sbjct: 655 MLIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLLMRLLPFELPMMRLGSSS 714
Query: 1023 VVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
+HK++++ + + +VEE++K L + +V VTC G +PL + FD CI+DEA
Sbjct: 715 RIHKQLEEISEDRLTKDCKTVEELEKALARPSIVGVTCQGTGHPLFQRRHFDYCIVDEAT 774
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P L PL+ SKFVLVGD QLPP+++S EAR+ G + +LF+RL E A+ +L
Sbjct: 775 QVLQPTVLRPLIHCSKFVLVGDPEQLPPIIRSKEARQRGADETLFQRLDSEEATAVLSL- 833
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIF 1198
QYRM + I L+N L YG L+C SDE++ A+ ++ L+ W++ AL + V
Sbjct: 834 -QYRMNKTITRLANELTYGGDLTCASDEVSGARFELELLNQAPRWVQRALTTHLEQAVTL 892
Query: 1199 VNT------------------DMLPAYE---------------AKDHQTLNNPVEACLIA 1225
+NT D + E K N EA ++
Sbjct: 893 INTGDCLERGQEFVNASQRLVDTCSSIEQSFGEDKDEIRKLTSKKRVSKYTNYCEAGIVM 952
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSF 1283
++ + L+K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S
Sbjct: 953 QLLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSC 1012
Query: 1284 VRS----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
++ S+ R+ + +L D R+ VA+TRAK KLI++G + L + + L +
Sbjct: 1013 SKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHI 1070
>gi|195116221|ref|XP_002002654.1| GI17500 [Drosophila mojavensis]
gi|193913229|gb|EDW12096.1| GI17500 [Drosophila mojavensis]
Length = 1113
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 300/1051 (28%), Positives = 502/1051 (47%), Gaps = 158/1051 (15%)
Query: 393 VLRLLNEQSGEERAV-HLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPD 450
VL+L +++ + +AV HL W T +A GD +++ ++ V +E + ++HPD
Sbjct: 90 VLQLRSDEDADAKAVCHLQAPWNQTPLAQGDLLSLKAQWQPTLAAYVVNKEQGYCVIHPD 149
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEE 509
+L+S T V S C R++VL +R + + + + ++ GTL+H++ Q L + + +E
Sbjct: 150 LLISSTSVTGSLFCRRKAVLQDRFRGVDSTNAVMIVGTLVHELLQTVLSQRLRQKSQVEN 209
Query: 510 YARLVLQKN--IESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDG 567
+ +L + LYA +N +I L + + +++++ + D + P+V
Sbjct: 210 ALQQMLHSVPLAQQLYAGQLNRAEIELQLYKFVGPIVDFVAQYVDGK---LPSVQPAE-- 264
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+ K +I ++ DIEE W P+ GLKG +D S+ V RN + +PLE KTG+
Sbjct: 265 MYKGRIDQIHDIEENLWVPQLGLKGKVDVSVHV-----RN--RKLPIPLELKTGR---AS 314
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAND 687
SMEH+ Q++LY L+ S + SGLL YL+ + V R++ LI+ RN+ A+
Sbjct: 315 FSMEHKGQLLLYQLMHSA-LGQETRSGLLLYLREGILREVHEGRNEQRDLILLRNDLAHY 373
Query: 688 II-------------------KASTTQQLPPMLRAYGGNKECSGLG------------NM 716
+ K QLP + + C+ ++
Sbjct: 374 LTRDVQLPVANEPLSLAEQPGKLLQPLQLPEPISHHSACGNCAYATLCCSFASTDPQLDL 433
Query: 717 FDSH---------IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFT 765
+SH + HL A ++ HW L+ LE + + +W +
Sbjct: 434 SESHPLRRLMPQVLEHLNQADYEYVFHWCGLLALEEQHARQSHQLRALWTETPAKRQQLG 493
Query: 766 GCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLR 825
+ + L +HQ D R+ + +LN + L G +
Sbjct: 494 RAIQQLQL--PEDHQARLVDGRYEQKLILSQEAESDLNLT----LSGFEL---------- 537
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDK 885
G+YVI+S + RLA+A+G IT + + + + L G+ + + + +DK
Sbjct: 538 -GEYVIISC-TTRLAIAAGYITALEPRSLCLQLERDL---GQRYALAS-------FIVDK 585
Query: 886 DEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK-- 943
E + S NL QL S +++QLR +++ P+ Q L I K
Sbjct: 586 HESQSFASFNFTNLAQLLAPSERAAQLRSIVIGRTRPK--------QQKVLPRIIGSKGG 637
Query: 944 ----SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+LN Q+ A ++ LT + LI G+PGTGKT T+V V+ L + ++L+T+ T+S
Sbjct: 638 PMLRALNKVQQVAALRALTTDTHLLIKGLPGTGKTQTLVAIVRLLHLMERTVLITAQTHS 697
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVH---KEIQKHCLSAMNINSVEEIKKRLDQVKVVAV 1056
AVDNLL++L ++ +R+G +H +EI + L+A N +VE++ L + +V V
Sbjct: 698 AVDNLLLRLLPYNLPLMRLGSSARIHPQLQEISEAQLTA-NCETVEQLTSALQKPSIVGV 756
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
TCLG + L ++FD CI+DEA Q P L L +S+F+LVGD QLPPLV+S EAR
Sbjct: 757 TCLGAGHALFQHRQFDYCIVDEATQVLQPAVLRALSHSSRFLLVGDPEQLPPLVRSREAR 816
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
G + SLF+RL E A+ L QYRM + I L+N L YG L C S+++ NAK+++
Sbjct: 817 LRGADESLFQRLDCEEATAVLTL--QYRMNRSITRLANHLTYGQALQCASEQVENAKLQL 874
Query: 1177 SDLSSCSPWLKEALNPC--RPVIFVNTD----------------------MLPAYEAKDH 1212
L+ C PW++ L + V ++TD + Y
Sbjct: 875 QPLAECCPWVQRTLQTHLEQAVFLLDTDDCAQRCQEYVDASKQLGNTSAAIEQHYGEAVE 934
Query: 1213 QTL----------------NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
QT+ +N EA ++ + +++++ + IG+I PY +Q L+R
Sbjct: 935 QTMQSIQLQSARSRRVPKYSNYCEAAIVLHLLRQVLQAGYDASRIGVIAPYRAQVELLRK 994
Query: 1257 -SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENP------RNCTSSLLGDWHRINVALT 1309
+S VE +T+D+YQGRDKD I+ S ++ R+ S +L D R+ VA+T
Sbjct: 995 LGEHLSGVEFNTVDQYQGRDKDLIIYSCTKTGSTAADQGMERSRESEILEDQRRLTVAIT 1054
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
RAK KLI++G + L + + L N + E+
Sbjct: 1055 RAKHKLILLGDIKCLERYTPFQKLFNHIHER 1085
>gi|170028839|ref|XP_001842302.1| DNA replication helicase dna2 [Culex quinquefasciatus]
gi|167877987|gb|EDS41370.1| DNA replication helicase dna2 [Culex quinquefasciatus]
Length = 1087
Score = 365 bits (938), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 297/1014 (29%), Positives = 476/1014 (46%), Gaps = 147/1014 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKC-DVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + G TV+++ FD + V ++ ++ PD LVSGT V + C RR VL
Sbjct: 77 WTGLQLVEGATVSIMAGFDRCAQVYRVSNQDGMIVTDPDYLVSGTSVVGALYCQRRGVLQ 136
Query: 472 ERLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES--LYACGVN 528
ER + ++ S ++GT++H++ Q L ++ M + L N + LY C +
Sbjct: 137 ERFRGVDKDSKLMMIGTIVHELLQRTLRNKLTDMSDIVSLGNTYLASNAMAHMLYGCSMT 196
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKY 588
+ D K + K+ N++ SQ P F G +++I V DIEE W +
Sbjct: 197 KADAIKEIEPFYAKIHNFVTKHFASQLPKKPF--FPPSGDSQVQIHAVRDIEENIWCHQL 254
Query: 589 GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL 648
GLKG ID ++ + S + ++PLE KTG+ S EH+ Q++LY ++M+ +
Sbjct: 255 GLKGKIDVTVDARCNSNQPL---QVMPLELKTGR---ASFSAEHKGQLVLYEMMMN--LV 306
Query: 649 KH-IDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK------------ASTTQ 695
H +++G+L YL+ + V R+ LIM RNE AN + K A T
Sbjct: 307 GHRVENGILLYLREGKCAPVSGNRNIKRDLIMLRNEVANFLSKSLPNADSADFDLAKDTL 366
Query: 696 QLP-PMLRAYGGNK-----ECSG--------------LGNMFDSHIYHLTTAHCSFLRHW 735
QLP P+ A+ ++ C+ + + D + HL+ H + W
Sbjct: 367 QLPEPLNNAHVCSRCPYAVICTAHLQREGRDLPADHSIKLIADESLSHLSDRHIDYFIRW 426
Query: 736 DRLIDLEAKEMQ--VVKNEIWC----SRGSGGNHFTGC-LSSIVLDASNEHQKSYRDNRF 788
L LE +E + IW R G F LS V+ A++E+
Sbjct: 427 AGLTYLEDQETRKSFKLKHIWTKSVEERHKMGRAFGNLRLSGRVICATSEY--------- 477
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKD----MDCTLRSGDYVILSTESDRLAVASG 844
YH N + DSL+ +++ ++ S Y+I ST S R+AVA+G
Sbjct: 478 -YH---------NFSV---DSLLPGGTQSQNAHERLNSFFESNQYLICST-SKRVAVAAG 523
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
+ + + +++SF + L S AD E + +D E +S + NL L
Sbjct: 524 RVITVGKRDITMSFERDL------SRHYAD----EQFTLDSYESNSSTTFNLTNLGVLLE 573
Query: 905 QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYAL 964
+ +S+ LRR+IVD E PRF S D + LN QR AI+ + Y L
Sbjct: 574 NTERSAALRRIIVDREKPRF--SKTISADIVTAAKEILGGLNKHQRVAILSAVGTDSYCL 631
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVV 1024
G+PGTGKT T++ ++ L+ G S+L+TS T+SAVDN+L +L+ I F+R+G V
Sbjct: 632 FKGLPGTGKTQTVIALIRLLVAMGKSVLITSNTHSAVDNVLRRLQPHGIKFLRLGASSRV 691
Query: 1025 HKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
+ + ++ ++ EE+ D K+V VTCLG + +L + FD CI+DEA Q
Sbjct: 692 DAALAEFTDGSVTEKCSTPEELAAVYDSYKIVGVTCLGAAHSMLVQRTFDYCIVDEATQV 751
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+ PL++A KFVL+GD QLPP+++S +A++ G + SLF RL + P++ L +Q
Sbjct: 752 FQSAVIRPLLYADKFVLIGDPDQLPPVIRSHKAKDLGADESLFFRL--DAPESCCELPTQ 809
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS------CSPWLKEALNPCRPV 1196
YRM + I L+N L Y +L+C ++ +A+A IK + + WL + + +
Sbjct: 810 YRMNKTITALANDLSYRGKLTCATEAVASATIKYATAPAMQKKHKSEKWLLRVIASQQEM 869
Query: 1197 IFVNTDMLPAY------------------------EAKDHQTLNNPVEACLIAKITQELV 1232
V + L Y E + N EA +I +
Sbjct: 870 SVVVINTLNTYKTNLDHIVESQRELGQMLRQGAVEEVRRKAIYENFCEAAVILYTVMTMF 929
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSV---------------SSVEIHTIDKYQGRDKD 1277
+ ++ IGII P+ +Q L+R + +VEI+T+D++QGRDKD
Sbjct: 930 EGGVDSSSIGIIAPFRAQVELLRRQFQLLKKFYESQKDTKDQAVNVEINTVDQFQGRDKD 989
Query: 1278 CILVSFVRS-----SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
I S +S E+ + +L D R+ VA+TRAK+KLI+VG ++L K
Sbjct: 990 VIFYSCTKSVDPDQPEDKKASEYEVLEDHKRLTVAMTRAKQKLIIVGDTKSLDK 1043
>gi|332029552|gb|EGI69441.1| DNA2-like helicase [Acromyrmex echinatior]
Length = 1030
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 290/977 (29%), Positives = 485/977 (49%), Gaps = 128/977 (13%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISAL-----------LG 486
V N FL+ PD+L+SGT + C RR++L E+ R I +L +G
Sbjct: 84 VDNNNGFLVTQPDLLISGTTIMGGLFCNRRAILTEKF----RKIESLPDLNADYSVMTVG 139
Query: 487 TLLHQIFQAGLMKEIPTM----KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPK 542
+L+HQ Q L + + T+ K L++ R + I+ LYA ++ D K ++E PK
Sbjct: 140 SLVHQWLQKALRENVCTLSDVIKLLDDILRS--KDTIDYLYASEMSLADCRKRMMEYAPK 197
Query: 543 MLNWI---ILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIR 599
+ +I I+ ++ +F + I+ + DIEE + P+ G+KG ID +
Sbjct: 198 IFEFIQHYIIGNKQHHISNLKDNFQGN------INNIQDIEETVYIPQLGIKGRIDVTAE 251
Query: 600 VKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYL 659
V I S+R I+PLE KTG+ S+EH+ QVILY ++M R + ID+GLL YL
Sbjct: 252 VNINSRRK-----IMPLELKTGR---ASYSLEHKGQVILYLMMMGFRD-QDIDTGLLLYL 302
Query: 660 QSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAS------------TTQQLPPMLRAYGGN 707
+ + Q + + LI+ RN A+ K +LP + +
Sbjct: 303 KENAMQEIKSGHHEKRDLILLRNILAHYFTKQPEDLRSINSESDLKAMELPEPINHHSAC 362
Query: 708 KECSGL------------GNMFDSHIY---------HLTTAHCSFLRHWDRLIDLEAKEM 746
CS N+ SH ++ T H ++ W L+ LE
Sbjct: 363 SRCSYQTLCCAYLARDPNANLSLSHPLTALLKEVQDNIETRHLDYIMKWIALLQLEESYE 422
Query: 747 QVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNA 804
N +W + C+ ++ + Q ++R+ + F R ++ +
Sbjct: 423 NNNNNLSSVWTTSPEKREAKGTCICNLKIVGKVIKQ----EHRYQHKFARVNIKKETIE- 477
Query: 805 SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRL 864
+++ G T +Y+++ST++ R+ +A+G I +S V V K +
Sbjct: 478 ---NNVFGG---------TFTEDNYIMVSTDA-RVNIAAGYIMHVSYDIVKVLLDKDITQ 524
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSSQLRRMIVDLEAPR 923
NS+ + IDK T S Y N+ L +LRR+++D +
Sbjct: 525 LYANST----------FHIDKYP-STGLSTFNYANIAGLLNNDEIYVKLRRIVIDKKPAT 573
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
F S + I S +LN++Q+RA++K + A++Y LI GMPGTGKT T+V ++
Sbjct: 574 FMKKLPRSVVSVSARIIS--NLNENQQRAVLKAVAAQEYVLIKGMPGTGKTQTLVALIEL 631
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI----QKHCLSAMNIN 1039
L G+S+L+T++T+SAVDN+L+KL ++IDF+R+G + +H + +++ L++ +
Sbjct: 632 LQELGSSVLITAHTHSAVDNILLKLLERNIDFLRLGSTKHIHPLLTCKNEEYALASC--D 689
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
S E+++ + ++V VTC G + LL + FDVC++DE+ Q LP L PL A KF+L
Sbjct: 690 SPEDLETLYNSKRIVGVTCYGAYHALLRRRSFDVCVVDESAQIMLPTVLRPLYSARKFIL 749
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGD QLPP++++ A + G SLF RL ++ L QYRM + IM L+N Y
Sbjct: 750 VGDPDQLPPIIKNKTAAKLGAGESLFVRLDSDNNTI--NLWKQYRMNRNIMRLANETTYC 807
Query: 1160 DRLSCGSDEIANAKIKVSD----LSSCSPWLKEAL--NPCRPVIFVNT----DMLPAYEA 1209
+L+ G+ ++ NA + ++ LS C W++ AL N V+ +NT ++ +
Sbjct: 808 GKLAFGNKQVENATLTGTNMEQVLSFCERWVRSALSRNLDDSVVVLNTGRTYNLNVESGS 867
Query: 1210 KD---HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIH 1266
+D QT +N E + ++ Q L++ + ++IGII PYN+ NL++ + VE++
Sbjct: 868 RDVILDQTYSNISEVAITLRLVQVLIEAGVCARNIGIIAPYNAHINLLKKVID-KEVEVN 926
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
T+D+YQGRDKD IL S +S E+ +L D R+ VA+TRA+ KLI++ TL +
Sbjct: 927 TVDQYQGRDKDVILYSCTKSVESDTKKEFEILDDQRRLTVAITRARHKLIIIADKVTLLR 986
Query: 1327 VPLLKLLINKVGEQSGI 1343
K L + + E++ I
Sbjct: 987 YVPFKNLFDVIEEKNVI 1003
>gi|324502018|gb|ADY40891.1| DNA2 helicase [Ascaris suum]
Length = 1123
Score = 365 bits (937), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 304/999 (30%), Positives = 488/999 (48%), Gaps = 113/999 (11%)
Query: 395 RLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKCDVGRENNFLIVHPDVLV 453
R N EE V L + W T IA G ++ +I + + V E+ +I+ D+LV
Sbjct: 136 RCKNASLDEEWNVELKDIWADTKIAVGSSIRLIEPKLIAEKDLVVDSESGLVILESDLLV 195
Query: 454 SGTRVAASFSCPRRSVLDERLKCSERSI---SALLGTLLHQIFQAGLMKE---IPTMKFL 507
S T V S C R++VL +R + R++ + ++G+++H +FQA + + + L
Sbjct: 196 SCTSVMQSLFCARKAVLSDRFR--GRNVPNKAMVIGSIVHVLFQAAVRNDSCKVTREWLL 253
Query: 508 EEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDG 567
+ + R ++ L A + + L + +++W+ D P + +
Sbjct: 254 DVWHRECDSSMLQQLVAMDMTPAQVENELDLYVDSIVSWV------NDYMPPPLGCHASL 307
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+I + DIEE W G+KG +D S VK + + +I PLE KTGK +
Sbjct: 308 CSGSRIERIIDIEENIWDHMIGIKGKVDVSFEVKTKHAKR----IIKPLELKTGK---SK 360
Query: 628 SSMEHRAQVILYTLLMSERY--LKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S+ EH QV+LY L +S R L I G+L+Y++ T+ + + ++L G++ RNE A
Sbjct: 361 SNFEHDGQVLLYCLALSSRIPNLGTIGDGVLFYVKDGTTRLIQPKSNELKGILHLRNEAA 420
Query: 686 NDIIKASTTQQLPPMLRAYGG-----NKECSGLGNMFDSHIY--------------HLTT 726
+ S P+ A + C L +S Y HLT+
Sbjct: 421 AYLGVLSERSIPEPLSNARNCKCCEYSTVCCALQKTVESSQYVSSSMMELQSLLTSHLTS 480
Query: 727 AHCSFLRHWDRLIDLE---AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
AH + W R + LE AK ++V +IW CL+++ +D +
Sbjct: 481 AHLQYFAKWVRWLFLEWNAAKSVKVDVRDIWKMDNKKREELGRCLTNMSIDF-----ECT 535
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
D+ V F R+ + P K + GD VI+STE + LA+A
Sbjct: 536 GDDCAVVKFKRK-----------------SGSPIKSV---FTKGDMVIVSTEKN-LALAM 574
Query: 844 GLITEISRFHVSVSFSK-PLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + + + SK RL + + +DK E +++S N+ L
Sbjct: 575 GPVEATDGNSIDILLSKQSARLKSGGT-----------FVLDKYESFSTYSSNLCNVGLL 623
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
A +++LR +++DL AP F S ++D + LN +Q A++K L A DY
Sbjct: 624 MENEAHTAKLRSLLIDLNAPTF---SKIAKDEVAKISTIVRRLNGEQAHAVVKSLVADDY 680
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL--KSQSIDFVRIGR 1020
LI G+PG+GKTST+ V+ LM G S+L+TS+T+SAVDNLL+KL S D +R+G
Sbjct: 681 VLIQGLPGSGKTSTIAVLVRCFLMLGRSVLITSHTHSAVDNLLLKLIQDVDSKDILRLGD 740
Query: 1021 HEVVHKEIQKHCLSA--MNINSV----EEIKKRLDQVKVVAVTCLGI-TNPLLTDKKFDV 1073
++V +E++ L+A NSV E ++ L Q +VA TCL + TN L + ++F +
Sbjct: 741 GKLVREELRALTLNAKLAESNSVGDEFERAQRILKQTPIVACTCLAVATNTLFSYRRFSI 800
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
C++DEA + L+ + KFVLVGD QL PLVQS ARE GM +SLF RL + H
Sbjct: 801 CLVDEASLVLESTLIPALLVSEKFVLVGDSSQLSPLVQSRTAREEGMSVSLFDRL-KVHS 859
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-LKEAL-- 1190
A+ L+ QYRM + I LS+AL Y L C ++ +A+A ++ +L + L +AL
Sbjct: 860 SALITLRYQYRMNRSIARLSSALFYNGELKCANELVASASLEQMNLENIDRLSLPDALYR 919
Query: 1191 ----NPCRPVIFVNTD------MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
+ V+F++T + NN E ++A I +K +D
Sbjct: 920 SVSGDVDDAVVFIDTQSEKNGCFRMEFGTSPGAIFNNG-EIKVVAAICDLFIKLRTPLED 978
Query: 1241 IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
IG+I+ Y A+++R +++ +E++T+D+YQGRDK ++VS V + + S LL D
Sbjct: 979 IGVISVYRYHADMLRKTIN-KRIEVNTVDQYQGRDKRIVIVSLVWTKLDGVR-RSELLSD 1036
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
RINVA+TRAK KLI+VG +++ + LI+ + E
Sbjct: 1037 ARRINVAITRAKHKLILVGCRQSMMSYDTMAALIDLIPE 1075
>gi|170577034|ref|XP_001893856.1| hypothetical protein Bm1_11930 [Brugia malayi]
gi|158599881|gb|EDP37309.1| hypothetical protein Bm1_11930 [Brugia malayi]
Length = 1038
Score = 363 bits (932), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 314/1072 (29%), Positives = 513/1072 (47%), Gaps = 146/1072 (13%)
Query: 344 LLEANSVVNGVPTD--PPENVNGTSSCHFLVLEVSEKNRPADPVDAKS-PYKVLRLLNEQ 400
+L ++VN + TD PP S +++ ++ + P +++ +V+ L +
Sbjct: 25 VLSTTTLVNRISTDCTPPRKRPKRLSVNYVERDIQDSFIPFGSIESSIINVRVISLSDNN 84
Query: 401 SGEERAVH-LWED------------WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIV 447
+ E R + + ED W T I G ++ VIG + + + EN LIV
Sbjct: 85 NDEIRELDCICEDTSKSYRLKLEGIWSSTPIKIGSSLRVIGAKMTEKELLLNWENGVLIV 144
Query: 448 HPDVLVSGTRVAASFSCPRRSVLDERLKCSERSI--SALLGTLLHQIFQAGLMK---EIP 502
+VLV T +A SC R++ L K SI L+G+++H++FQA + + ++
Sbjct: 145 ESNVLVPCTLIAQGISCRRKATLSHYFK-GRSSIRKEMLIGSVVHELFQAAITRSGFDVT 203
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVD 562
L+ + R + ++ E +A ++ ++ L + +W+ + S ++
Sbjct: 204 ENSLLDLWRRELHEQYAEQFFALNLSFQEVEDELCVYFKTIASWVSTYMSSPKGRNESLQ 263
Query: 563 FGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVK---------------IESKRN 607
GS KI EV D+EE W YG K ID +++ + +E K
Sbjct: 264 TGS------KIMEVVDVEESIWNSCYGFKAKIDCTLKYELSKHFEENFYYFKFPVEKKNG 317
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
E ++P+E KTGK + EH QV+LY L ++ + + I+SGLL YL + ++ V
Sbjct: 318 E--KKLIPIELKTGK---SNPNTEHITQVMLYCLALASKQ-RTIESGLLLYLLDETSRTV 371
Query: 668 MVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAY-----GGNKECSGL-------GN 715
+ DL G++ RNE A+ I S P+L + CS L
Sbjct: 372 SPKTIDLKGILQMRNEIASSISDTSFDNLPEPILNTHICKWCNHALSCSLLQYSTSTATE 431
Query: 716 MFDSHIYHLTTAHCSFLRHWDRLIDLEAK---EMQVVKNEIWCSRGSGGNHFTGCLSSIV 772
+ + HL +H + + + RLI +E + E + E C R + L SI
Sbjct: 432 IVQDQLKHLKESHIDYFKRFIRLILMEWRYITEKNAIDKENICRRKNSLLSVKVILDSIF 491
Query: 773 LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
R NR F R+ N GD L+ +L
Sbjct: 492 ----------QRGNRTTITFQREEAVDENELFIKGDMLL-------------------VL 522
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
S ES+ +A+AS + E + V+V+ NSSS ++ +++ +++ E
Sbjct: 523 SKESEVIAMASVISVEGNFIDVAVN---------GNSSS---FVVGKIYLLERHETSFQH 570
Query: 893 SVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS---GSVFSQDPALSYIWSEKSLNDDQ 949
++ NLV L + Q S++R +I+D+ P F G++ + + LN DQ
Sbjct: 571 TLNLGNLVMLMDDNKQMSKIRSLIIDMRPPLFSKMKKGNISDISGIV------RQLNIDQ 624
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
RA++K L + DY +I G PG+GKTST+ ++ L+ G ++L+TSYT+SA+DNLL KL
Sbjct: 625 ARAVVKSLMSDDYTIIEGFPGSGKTSTLAVLIRCLIHLGRTVLITSYTHSAIDNLLSKL- 683
Query: 1010 SQSIDFV------RIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVKVVAVTC 1058
I++V R+G+ V+K ++ L A ++ + ++ L + +VA TC
Sbjct: 684 ---IEYVDESKILRLGQQISVNKSMRHLTLEAKLSKPSKMDRISLMQHILXETPIVACTC 740
Query: 1059 LGI-TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
LG+ TN L + ++F + ++DEA PV + + + FVLVGDH QL PLV S +AR+
Sbjct: 741 LGVSTNLLFSYRRFSITVVDEASLVLEPVIIPAIAASDSFVLVGDHRQLAPLVCSKQARQ 800
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK-- 1175
G+ SL RL+ H AI L SQYRM + I ELS+ L Y +L C ++ IA A +
Sbjct: 801 EGLAKSLLERLTIHH-SAIITLHSQYRMNRPIAELSSVLFYDGKLCCANNIIAEAVLNNL 859
Query: 1176 VSDLSSCSPWLKEALNPC------RPVIFVNTDML--PAYEA--KDHQTLNNPVEACLIA 1225
D + S + EA C ++FV+T PA+ A ++ + N E IA
Sbjct: 860 TYDPINDSTY-SEAYKLCVSNLLNNAIVFVDTQSYKNPAFCATFRNFGDVVNSGEXEFIA 918
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVR 1285
+ + VK + D+G+I+ Y +R + + +E++T+D+YQGRDK I++SFV
Sbjct: 919 GLCRLFVKQGLSESDLGVISIYRYHVEQLRRIVQ-AGIEVNTVDQYQGRDKSIIILSFVW 977
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+ E N S LL D RINVA+TRAK KLIMVG ++LS P + +IN +
Sbjct: 978 TGE-AENRKSELLADCRRINVAITRAKHKLIMVGCQKSLSSYPAVNAIINAI 1028
>gi|281208385|gb|EFA82561.1| DEAD/DEAH box helicase domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1601
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 212/498 (42%), Positives = 305/498 (61%), Gaps = 35/498 (7%)
Query: 880 VWRIDKDE-IMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFS---QDPA 935
+RIDKDE +SFS+++ NL LF+ + SS+LR +IVDLE P+FD S +
Sbjct: 1104 TFRIDKDEGSSSSFSILKSNLFNLFMPTT-SSRLRDLIVDLEQPQFDYQDRLSSLINNND 1162
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
+ S++SLN DQ AI +V+ AKDY+LILGMPGTGK++++ H V L G S+LLTS
Sbjct: 1163 FDQLISKRSLNPDQSNAIKRVILAKDYSLILGMPGTGKSNSIAHLVSILYSLGKSVLLTS 1222
Query: 996 YTNSAVDNLLIKLKSQSID-FVRIGRH-EVVHKEIQKHCLSAMNINSVEEIKKRLDQVKV 1053
++++++D+LL K ++ +RI + V + +QK CL +S+ E+KK LD ++
Sbjct: 1223 FSHTSLDSLLEKCVGAGVNHMLRIASNINQVAEPLQKFCLERQQFSSITEMKKFLDSHRI 1282
Query: 1054 VAVTCLGITNPLLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
+A TCLG + +KFD CI+DEA Q T P+ G L + SKFVLVGD+YQLPPLVQ+
Sbjct: 1283 IATTCLGTNHAYFNQSRKFDYCIIDEASQLTQPMCFGVLKYCSKFVLVGDNYQLPPLVQN 1342
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
+EA++ GME SLF+RLS HP A++ L QYRMC IM LSN LIY RL CG+ ++ANA
Sbjct: 1343 SEAKKLGMEDSLFKRLSSAHPSAVTYLHYQYRMCSDIMYLSNELIYNGRLKCGNYQVANA 1402
Query: 1173 KI------KVSDLSSCSPWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLNNPVEACLIA 1225
+ + S + + W+ P V F+NTD L + E K +N EA +++
Sbjct: 1403 SMTSVNCQRASLIYPPTGWVSRVCQPQVKVQFLNTDQLSDSKEQKIGDLYSNSTEALVVS 1462
Query: 1226 KITQELVKNEIEGKDIGIITP---------------YNSQANLIR---HSLSVSSVEIHT 1267
+I Q L+ + + DIGII+P + Q++L + +L + ++I T
Sbjct: 1463 QIVQCLLYSGAKQSDIGIISPNRIQLRNIKRAIADIFERQSDLDKSTTQALPYADIDIFT 1522
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
IDKYQG+DKDCIL+S VR+ N + LL DW R+NV+ TRAKKKL+++GS TLS
Sbjct: 1523 IDKYQGKDKDCILISMVRN--NNQELIGDLLKDWRRLNVSFTRAKKKLLIIGSLSTLSSF 1580
Query: 1328 PLLKLLINKVGEQSGILN 1345
PL L + ++ I N
Sbjct: 1581 PLYDDLFQILKDKQWITN 1598
Score = 205 bits (521), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/567 (27%), Positives = 249/567 (43%), Gaps = 102/567 (17%)
Query: 381 PADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGR 440
P+ +++ K + NE+ R V L+ +W ++++ GD NVIGEFD G +
Sbjct: 456 PSQGINSSIHKKTINAFNEELQLNRTVLLFGEWIYSLVHAGDIFNVIGEFDSNGLIVIDN 515
Query: 441 ENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKE 500
N L++HPD L++GT + SFSC RR++L E+L S L G+++H+IFQ L +
Sbjct: 516 VKNLLVLHPDFLITGTELGGSFSCSRRALLKEQLTSEFNSTVPLYGSIVHEIFQQCLTEN 575
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI----ILFKDSQDL 556
+E + R +L + +L + E H+ E I + I +F DSQ+
Sbjct: 576 SFGSDDIERFKRDILLQPSFALKLSSLGET--HQVASEHIGGWQSVIQSFSSIFVDSQNG 633
Query: 557 NTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI------------ES 604
V+ + L+I++V DIEE W+P YGLKG ID+S+ VK+
Sbjct: 634 KRNIVEINGEQW-HLQITKVLDIEENIWSPMYGLKGKIDSSVEVKLTPPYQKATSPSTTR 692
Query: 605 KRNEING------------------------MILPLEFKTGKIPNGQSSMEHRAQVILYT 640
KR N + +P E KTGK P ++ H +QV++YT
Sbjct: 693 KRKTTNNSPYKQQQQQQQNNNKNNRNRVPIYLNVPFEIKTGK-PYEVPNIAHTSQVLIYT 751
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQG---------VMVQRSDLVGLIMRRNEFA-----N 686
L+M++RY +H + GLLYYL++ + + ++ R+ + LI+ RN A N
Sbjct: 752 LMMNDRYEQHTNLGLLYYLKNSKERAGKSFGILHPIVPDRNQIRSLIVSRNLLAYYLNLN 811
Query: 687 DIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDSHIYHLTT 726
+ LP ML+ G++ SGLG++FD HL
Sbjct: 812 SRFVLNPNPVLPKMLKEERTCSKCYLVDQCLLHHRAVENGDRNTSGLGDLFDEKTLHLKQ 871
Query: 727 AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDN 786
+H +L+ W++LI LE + + IW C+ S+ ++ ++ +
Sbjct: 872 SHIEYLKKWNKLISLELESNNNYRKLIWNFPSRFREDKGMCIGSLTME-----REEFIQG 926
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLI 846
+Y F G K + L GDYV +S E VA G I
Sbjct: 927 GVIYKF-------------------GLPSSEKAANALLFQGDYVTVSIERKYYGVAIGQI 967
Query: 847 TEISRFHVSVSFSKPLRLPGRNSSSDA 873
TEIS + V + + P SDA
Sbjct: 968 TEISANSIKVLCREKITEPPVVVQSDA 994
>gi|395741723|ref|XP_002820937.2| PREDICTED: DNA2-like helicase-like, partial [Pongo abelii]
Length = 512
Score = 360 bits (924), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 212/488 (43%), Positives = 291/488 (59%), Gaps = 26/488 (5%)
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALS 937
++R+D++E NL +L + S +LR +I+D P+F S SV D +
Sbjct: 10 LFRLDQEEKNCDIDTPLGNLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDT 69
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
K LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT
Sbjct: 70 VACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYT 129
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVK 1052
+SAVDN+L+KL I F+R+G+ + VH +Q+ C S +I S+ +++ +
Sbjct: 130 HSAVDNILLKLAKFKIGFLRLGQTQKVHPAVQQFTEQEICRSK-SIKSLALLEELYNSQL 188
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
+VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 189 IVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLN 248
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA
Sbjct: 249 REARALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANA 307
Query: 1173 KIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
IK+ S +PWL P PV F+NTD +PA E + ++N E
Sbjct: 308 VIKLPHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTE 367
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKD 1277
A L +T VK DIGII PY Q +I L+ SS VE++T+DKYQGRDK
Sbjct: 368 AKLTVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSSIGMVEVNTVDKYQGRDKS 427
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+LVSFVRS N LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N +
Sbjct: 428 IVLVSFVRS--NKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHL 485
Query: 1338 GEQSGILN 1345
+ I++
Sbjct: 486 NSEKLIID 493
>gi|326427922|gb|EGD73492.1| hypothetical protein PTSG_05196 [Salpingoeca sp. ATCC 50818]
Length = 1412
Score = 357 bits (917), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/594 (37%), Positives = 330/594 (55%), Gaps = 77/594 (12%)
Query: 827 GDYVILSTESDR-LAVASGLITEISRFHVSVSFSKPLR-------LPGRN---------- 868
GD+V+LST+ R AV +G + + ++V+F +P+R L +N
Sbjct: 808 GDHVVLSTQRPRHAAVRTGRVAGVDATAITVAFDRPVRQITSKADLRTKNTTATAASASA 867
Query: 869 ------------SSSDADSLLHE------VWRIDKD-EIMTS-------FSVMRYNL--- 899
+ S AD+ + V+R+D+D + T+ FS+ NL
Sbjct: 868 SERERERAASAATQSLADATATQSATSAVVYRLDRDPSVYTARSYRGHLFSLFGSNLPVK 927
Query: 900 VQLFLQSAQSSQL--------RRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRR 951
Q + +Q++QL R ++V L P F + + + + LN+ QR
Sbjct: 928 AQRYQPPSQATQLATDVKERRRALLVGLTPPAFRDELPDLETAVVDRLSASFGLNEIQRE 987
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL-KS 1010
A+++VL A DY LI GMPGTGKT+T+ V + G S+LLT+YT+SAVDN+L+K+ K+
Sbjct: 988 AVLRVLCADDYCLIQGMPGTGKTTTIACLVSVMAEIGLSVLLTAYTHSAVDNVLLKVHKT 1047
Query: 1011 QSIDFVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAVTCLGITNPLLTD 1068
F+R+G + +H I+ H +A+ +SV E+ V VVA TCLG+ + +L
Sbjct: 1048 LRGQFLRLGGVDRIHPSIRDHSAAAVRQRCSSVAELSSAYHSVSVVATTCLGVNHAILDH 1107
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
++FD CI+DEA Q T LGP+ A+KFVLVGDH QLPPLV+S AR GM++S+F+RL
Sbjct: 1108 RQFDYCIVDEASQITQTACLGPIAHATKFVLVGDHLQLPPLVRSQRARAGGMDVSMFKRL 1167
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-----------S 1177
S +P A L QYRMC IM LSNA+ Y ++L+CG+D +A ++ + S
Sbjct: 1168 SSANPAATVVLSKQYRMCAEIMRLSNAITYENKLTCGADVVATQRLNIDVTRLSLLREAS 1227
Query: 1178 DLSSCSPWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLNNPVEACLIAKITQELVKN-E 1235
L S WL+ A++P P +F++T LP A E +D + L+NP E L+A + + LV +
Sbjct: 1228 ALLSSPRWLEHAVDPSHPTVFLDTSRLPQAREERDGKVLHNPTEVTLVATLCRVLVHSLG 1287
Query: 1236 IEGKDIGIITPYNSQ----ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
+ +D+G+I PY +Q + H + VE +T+D+YQGRDK CI+VSFVRS NP
Sbjct: 1288 LPAEDVGVIVPYRAQLRRVQTAVHHQHGLRGVECNTVDRYQGRDKACIIVSFVRS--NPE 1345
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL D RINVALTRAK KLI++G TL L +I + S I++
Sbjct: 1346 GHVGELLQDERRINVALTRAKAKLILIGCSSTLMSSVTLAGVIRLATDGSWIVS 1399
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 126/224 (56%), Gaps = 6/224 (2%)
Query: 385 VDAKSPYKVLRLLNEQS---GEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE 441
V+ P K L LL S G+ L ++W T ++PGD V VIG+FD G C V +
Sbjct: 213 VEGDYPQKQLTLLGTSSHISGQHLTCVLLDEWARTDVSPGDVVEVIGQFDRSGTCCVSTK 272
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKE 500
NFL+VHP+VLV+ TRVA SF C R++VL E + S+ ++ A+ GTLLH +FQ L +
Sbjct: 273 ANFLVVHPEVLVATTRVATSFQCLRKAVLSEHFRSSDVTVPAMAYGTLLHLVFQTALQRH 332
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
+ +FL R L+ +E LYA GV+E + + L + W F +
Sbjct: 333 DFSREFLHACIRDTLRTEMELLYAVGVSEAEAERELHTYTDALQLWAQRFLRRDPTELVS 392
Query: 561 VDFGSDGLK--KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKI 602
+D ++ + ++ I+++ DIEE W+P++GLK IDA++ V I
Sbjct: 393 LDAVNNRVHQDRVAINDLRDIEEACWSPRFGLKASIDATVGVAI 436
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 88/168 (52%), Gaps = 35/168 (20%)
Query: 612 MILPLEFKTGK-IPNGQSSMEHRAQVILYTLLMSERYLKH-IDSGLLYYLQSDQTQGVMV 669
M++PLE KTG+ + NG S +HRAQVILY L+M+E L H +GLLYY++S + GV +
Sbjct: 542 MLMPLEVKTGRAVTNGSS--DHRAQVILYALVMNE--LGHNTSAGLLYYMKSGEMYGVPL 597
Query: 670 QRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRA--------------------YGGNKE 709
R +++ L+ RN A + + + + PP+LR+ GG +
Sbjct: 598 HRPEIIALLGARNALAGYLKRGT---EYPPVLRSESACGRCYHINLCTAVHASVEGGTAD 654
Query: 710 CSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE---IW 754
GL + F++ HL+ ++R W +DL A E V ++ +W
Sbjct: 655 SFGLKDEFNARTSHLSATDTEYMRTW---LDLIAHEDAVASDDASRLW 699
>gi|31657176|gb|AAH53574.1| DNA2 protein [Homo sapiens]
Length = 494
Score = 356 bits (914), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 209/469 (44%), Positives = 282/469 (60%), Gaps = 25/469 (5%)
Query: 898 NLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
NL +L + S +LR +I+D P+F S SV D + K LN QR+A+ K
Sbjct: 11 NLSKLMENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKK 70
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+L+KL I F
Sbjct: 71 VLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNILLKLAKFKIGF 130
Query: 1016 VRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+GI +P+ + K
Sbjct: 131 LRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCMGINHPIFSRKI 189
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR GM SLF+RL E
Sbjct: 190 FDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALGMSESLFKRL-E 248
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS---------- 1180
++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 249 QNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHFKDVKLELEFYA 308
Query: 1181 --SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S +PWL P PV F+NTD +PA E + ++N EA LI +T VK
Sbjct: 309 DYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSP 368
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVRS N
Sbjct: 369 SDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGE 426
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 427 LLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 475
>gi|322800176|gb|EFZ21261.1| hypothetical protein SINV_05223 [Solenopsis invicta]
Length = 1235
Score = 356 bits (913), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 304/1034 (29%), Positives = 484/1034 (46%), Gaps = 137/1034 (13%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
V +S VL + + +S V E W + D V I D + + N
Sbjct: 227 VKHESRVTVLTVQHLESESIDTVTCTESWKDARVKIDDVV-TIQATKDTRRWIIDNNNGL 285
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISAL-----------LGTLLHQIF 493
L+ PD+L+SGT + C RR+VL E+ R I +L +G+L+HQ
Sbjct: 286 LVTQPDMLISGTTIMGGLFCNRRAVLSEKF----RKIESLPNLDGDYSLMTIGSLVHQWL 341
Query: 494 QAGLMKEIPTMK----FLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-- 547
Q L + I + L++ R + + LYA ++ D K ++E P++ +I
Sbjct: 342 QRALQENISALSDVIILLDKMLRS--KDTLNYLYASELSFADCRKRMMEYAPRIFEFIQH 399
Query: 548 -ILFKDSQDLNTPTVDF-GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK 605
I Q ++ +F GS IS + DIEE + PK G+KG ID + V I S+
Sbjct: 400 YIKGNKQQHISKLKDNFQGS-------ISNIQDIEENVYIPKLGIKGRIDVTAEVTINSR 452
Query: 606 RNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL-KHIDSGLLYYLQSDQT 664
+ I+PLE KTG+ S EH+ QVILY ++MS ++ + ID+GLL YL+ +
Sbjct: 453 KR-----IMPLEVKTGR---ASYSHEHKGQVILYLMMMS--FMDQDIDTGLLLYLKENAM 502
Query: 665 QGVMVQRSDLVGLIMRRNEFANDIIKASTTQ------------QLPPMLRAYGGNKECSG 712
Q + + + LI+ RN A K +LP + + +C
Sbjct: 503 QEIKSRHHEKRDLILLRNTLAYYFAKKPEDSRNMNSESDLKALELPEPINHHSACGKCPY 562
Query: 713 LG------------NMFDSHIY---------HLTTAHCSFLRHWDRLIDLE--AKEMQVV 749
N+ SH T H ++ W L+ LE +
Sbjct: 563 QALCCAYLVRDSNVNLSPSHPLTALMKELKDDFETNHLDYIMKWIALLQLEDSYENKSNS 622
Query: 750 KNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSP-NLNASDGD 808
+ IW C+ ++ + R++R+ + F R + N N + GD
Sbjct: 623 LSSIWTMSPEKREARGTCICNL----KTIGKVVKRNDRYEHRFARVDIKGETNENGALGD 678
Query: 809 SLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRN 868
+ D D D++ +ST++ R+ +A+G I +S V+V K +
Sbjct: 679 AF--------DED------DFIFVSTDA-RINIAAGHIIHVSHDVVAVLLDKDI------ 717
Query: 869 SSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSSQLRRMIVDLEAPRFDSG 927
A H + IDK T S Y N+ L S +LR +++D F
Sbjct: 718 ----ARLYAHSTFHIDKYP-STGLSTFNYANVAGLLSNDETSVRLRHIVIDRRPATFVEK 772
Query: 928 ---SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
SV S L LN++Q+RA++K + A DY L+ GMPGTGKT T+V ++ L
Sbjct: 773 LPRSVVSASTELI-----GDLNENQQRAVLKAVAANDYVLLKGMPGTGKTKTLVALIELL 827
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI--QKHCLSAMNINSVE 1042
G S+L+T++T+SAVDN+L+KL +++DF+R+G + +H + + + + +S E
Sbjct: 828 QKLGFSVLITAHTHSAVDNILLKLLERNLDFLRLGSAKQIHPLLTCKSEEYAIASCDSPE 887
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
+++ + +V VTC G + LL ++FDVC++DE+ Q P L PL A KFVLVGD
Sbjct: 888 DLEALYNSKHIVGVTCYGAYHALLRRRRFDVCVVDESAQIVQPTVLRPLYSARKFVLVGD 947
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLPP++++ A + G + SLF RL ++ L QYRM IM+L+N + Y +L
Sbjct: 948 PDQLPPIIKNKIAAKLGADESLFIRL--DNDDNTINLYKQYRMNGRIMQLANDVTYRGKL 1005
Query: 1163 SCGSDEIANAKIKVSD----LSSCSPWLKEALNPCRPVIFVNTDMLPAYE---------A 1209
GS ++ NA + + LSSC W++ AL+ + D Y
Sbjct: 1006 MPGSKQVENATLTGVNIEQVLSSCERWIRNALSRHLDDSVMVLDTGSTYNLNVESGNRGV 1065
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTID 1269
Q +N EA + ++ Q L + + ++IGII PYN+ NL+R + VE++T+D
Sbjct: 1066 TSDQMYSNIWEAAITLRLVQVLTEAGVCARNIGIIAPYNNHKNLLRKIID-KEVEVNTVD 1124
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
+YQGRDKD IL S +S E+ +L D R+ VA+TRA+ KLI++ TL +
Sbjct: 1125 QYQGRDKDVILYSCTKSVEDNTKKEFEILDDQRRLTVAITRARHKLIIIADKVTLLRYKP 1184
Query: 1330 LKLLINKVGEQSGI 1343
K L + + E++ I
Sbjct: 1185 FKNLFDVIDEKNMI 1198
>gi|391328044|ref|XP_003738503.1| PREDICTED: DNA2-like helicase-like [Metaseiulus occidentalis]
Length = 1204
Score = 355 bits (911), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 282/971 (29%), Positives = 473/971 (48%), Gaps = 114/971 (11%)
Query: 407 VHLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPDVLVSGTRVAASFSCP 465
V L W T A + V G F + GK D + F++++P L+S T + A C
Sbjct: 274 VLLSGSWLMTNPALDTEIFVFGMFQENLGKVD--SQCGFVVLYPQHLLSITTITAGLYCK 331
Query: 466 RRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNI-ESLY 523
R+S+L+++ K E S S L+ GT+ H++FQ + +++ + + ++ + I LY
Sbjct: 332 RKSLLNQKFKRIEPSNSHLIVGTVAHEVFQRAVSEKLQRAEIVAVLDEILARSEIVHDLY 391
Query: 524 ACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMA 583
+I +++ IP +L+++ D S +I E+ DIE+
Sbjct: 392 LLNSGHYEIKAAVLQMIPHILSFM-------------RDHLSPSRAAFQIDEIIDIEDNL 438
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
P+ G++G +D ++R+K R +PLE KTGK G +H AQV YT ++
Sbjct: 439 LCPRLGVRGKVDLTVRLKTPDGRVMPQ---VPLELKTGKPTFGN---DHMAQVFFYTAML 492
Query: 644 SERYLKHI------DSGLLYYL-QSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ 696
+E+ K + D+G+L Y+ +S+ ++ V R L L+ +RNE A K T ++
Sbjct: 493 NEKSGKALSDPDSCDTGILTYISRSNDSRLVKPNRFALQSLMQQRNELATSWEKIQTPRK 552
Query: 697 LPPMLRAYGGN----KE---------CSGLGNMF-----------------DSHIYHLTT 726
P + G+ KE C + +++ + + L+
Sbjct: 553 GPEGIEIDAGSLGEFKEDERGCSQCSCRAVCSLYAKMTNDLPAGTVRAKVAEESLGDLSK 612
Query: 727 AHCSFLRHWDRLIDLE-AKEMQVVKNEIWC----SRGSGGNHFTGCLSSIVLDASNEHQK 781
++ HW RL+D E +K + + W R + GN C+ + +D
Sbjct: 613 EQIDYVWHWLRLLDKECSKASKKTPSAFWMIPLDERVASGN----CIKDLQIDLK----- 663
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
P +S G S + P +L Y+ +S + ++ V
Sbjct: 664 ----------------PKNGTTSSMGGSYLRLRGPIDLESTSLAPNSYIAVSEQGNKTRV 707
Query: 842 A--SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNL 899
A +G + EI + +++S + G + + ++V+ +DK +S + NL
Sbjct: 708 ANRTGFVHEIGQDFITLSLINDV---GAGTPLNP----NKVYCVDKMNSSSSSNTTYTNL 760
Query: 900 VQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
V++ Q LR +++D AP ++ I+++ LND Q RAIIK L +
Sbjct: 761 VRIL--QPQYVHLRELVIDRRAPTYERDYPRKNVELCQEIFND--LNDTQVRAIIKTLMS 816
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
DY L+ GMPGTGKTS +V V+AL+ +L+TSYT++A+DN+L +L +DFVRIG
Sbjct: 817 NDYLLLKGMPGTGKTSVIVATVRALVKLNQRVLVTSYTHNALDNILERLDKFGVDFVRIG 876
Query: 1020 RHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
+ + +N+V ++KK + V TCLG N + +KFD CI+DEA
Sbjct: 877 NTSNKVIRAKSTAVELAGVNNVNQVKKFYSEKMVFGATCLGTNNVVFEKEKFDYCIVDEA 936
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q P LGP+M A KF+LVGD QL P++ S A+ GM+ LF+RL + AL
Sbjct: 937 SQVLQPTCLGPIMCAKKFLLVGDPDQLSPVILSRSAKRFGMDECLFKRLQAADSSNLIAL 996
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV--SDLSSCSPWLKEAL--NPCRP 1195
QYRM IM LSN L+Y ++L CG+D++AN +K+ + S W ++ + N
Sbjct: 997 NYQYRMNSEIMALSNGLVYENKLVCGNDQVANRTLKLDATKDSKLEDWQRKCVSGNLRDA 1056
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
V+F+ D+ E+ + + +N EA LI I L++ + DIG+I+ Y Q ++
Sbjct: 1057 VVFL--DLKKNSESTNGR--DNLEEANLIRNIINLLIERGLSKADIGVISSYTDQVTCLK 1112
Query: 1256 HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
L VE TID+YQG++K+ +++S VR+ + + ++ D RINVA++RA+ KL
Sbjct: 1113 GILP-EGVESSTIDRYQGKEKEVMIMSCVRTGTDA-TFENEIMNDLKRINVAISRARSKL 1170
Query: 1316 IMVGSCRTLSK 1326
I+VG R++ +
Sbjct: 1171 ILVGCKRSIGE 1181
>gi|195566007|ref|XP_002106584.1| GD16967 [Drosophila simulans]
gi|194203965|gb|EDX17541.1| GD16967 [Drosophila simulans]
Length = 1100
Score = 354 bits (909), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 302/1011 (29%), Positives = 492/1011 (48%), Gaps = 137/1011 (13%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDV-GRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GDTV+++G++D C V +E + + HPD L+SGT V S C R+SVL
Sbjct: 111 WNCMPVQVGDTVSLLGKWDPSAACYVVDKEQGYCVSHPDFLISGTTVTGSLFCKRKSVLQ 170
Query: 472 ERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVN-- 528
ER + + S + +GTL+H++ Q L +++ K ++ + +L + S N
Sbjct: 171 ERFRGLDSGNSVMVIGTLVHELLQKVLRQKLFDKKHIQSALQEMLASSSLSHLLYASNLS 230
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKY 588
+ ++ L++ I +++++ + + TP+V + +I E+ DIEE W P+
Sbjct: 231 QVEMEDHLMKFIDPIVSFLAQYVKGE---TPSVLLPE--VYSGRIHEICDIEENLWVPQL 285
Query: 589 GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYL 648
GLKG +D S++VK + +R EI +PLE KTG+ SMEH+ Q++LY L+ S +
Sbjct: 286 GLKGKVDVSVKVKNQRQREEI----VPLELKTGR---ASFSMEHKGQLLLYQLMHSAQG- 337
Query: 649 KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII--------KASTTQQL--- 697
+ SGLL YL+ + V R++ L+M RN+ A + K +QL
Sbjct: 338 RDTQSGLLLYLKEGLLKEVASGRNEQRDLLMLRNDLAYWLTREVAIPAGKEDPLEQLALP 397
Query: 698 -PPMLRAYGGNKE----CSGLGN------MFDSH---------IYHLTTAHCSFLRHWDR 737
P + GN CS + DSH + HL+ A ++++HW
Sbjct: 398 EPVYHHSACGNCAYNTICSSFAQKDSSLQLSDSHPLKKLMPQLLEHLSEADHAYVQHWCG 457
Query: 738 LIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHM 797
L+ LE + N + S + + +K R R + Q +
Sbjct: 458 LLALEEQH----------------NRQSSHARSFWTEDPAKREKEGRAIRHLKLVKGQEV 501
Query: 798 PSPNLNASDGDSLIGAAIPTKDMDCT-LRSGDYVILSTESDRLAVASGLITEISRFHVSV 856
L A P++D+ + G+YV++S+ S RLAVA+G I + + +
Sbjct: 502 VLEEGRYRQTLELGEEADPSRDLSLSGFGLGEYVVISSTS-RLAVAAGYIVSMEARRLDL 560
Query: 857 SFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSSQLRRM 915
+ L + E + IDK + SF+ + NL L + + +LR +
Sbjct: 561 RLERDL----------SQRYSQEGFIIDKHD-SQSFATFNFTNLGMLLSEGERFQELRDI 609
Query: 916 IVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAIIKVLTAKDYALILGMP 969
IV + P Q L I K LN Q+ A ++ LT + LI G+P
Sbjct: 610 IVAKKPP--------EQHKVLPKIILTKGASMLLKLNKVQQNAALRALTTSSHMLIKGLP 661
Query: 970 GTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQ 1029
GTGKT T+V V+ L + G S+L+T+ T+SAVDNLL++L + +R+G +HK+++
Sbjct: 662 GTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLLMRLLPFELPMMRLGSSSRIHKQLE 721
Query: 1030 KHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
+ + + +VEE++K L + +V VTC G +PL + FD CI+DEA Q P
Sbjct: 722 EISEDRLTKDCTTVEELEKALARPSIVGVTCQGTGHPLFHRRHFDYCIVDEATQVLQPTV 781
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQ 1147
L PL+ SKFVLVGD QLPP+++S EAR+ G + +LF+RL + A+ +L QYRM +
Sbjct: 782 LRPLIHCSKFVLVGDPEQLPPIIRSKEARQRGADETLFQRLDSKEATAVLSL--QYRMNK 839
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT-DML 1204
I L+N L YG L C SDE++ A+ ++ L+ W++ AL + V +NT D L
Sbjct: 840 TITRLANELTYGGDLKCASDEVSGARFELDLLNQAPRWVQRALTTHLEQAVTLINTGDCL 899
Query: 1205 P-----AY-----------------EAKDH----------QTLNNPVEACLIAKITQELV 1232
Y E KD N EA ++ ++ + L+
Sbjct: 900 ERGQEFVYASQRLVDTCSSIEQSFGEDKDEIRKLTSKKRVSKYTNYCEAGIVMQLLRYLL 959
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVRS---- 1286
K+ E IG+I PY +Q L + S + +E +T+D++QGRDK+ I+ S ++
Sbjct: 960 KSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSCSKTGGDF 1019
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S+ R+ + +L D R+ VA+TRAK KLI++G + L + + L +
Sbjct: 1020 SDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQYGPFRQLFKHI 1070
>gi|194746818|ref|XP_001955851.1| GF24887 [Drosophila ananassae]
gi|190623133|gb|EDV38657.1| GF24887 [Drosophila ananassae]
Length = 1092
Score = 354 bits (908), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 304/1031 (29%), Positives = 496/1031 (48%), Gaps = 154/1031 (14%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPDVLVSGTRVAAS 461
E HL W + GDTV+++ ++ G V ++ F + HPD+L+S T + S
Sbjct: 99 ETALCHLQTPWTSMRLKVGDTVSLLAKWHSSLGAHLVNKDYGFCVAHPDLLISATTLTGS 158
Query: 462 FSCPRRSVLDERLKCSERSISAL-LGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK--- 517
C R+SV+ ER + + S + +GTL+H++ Q L+ ++ T L+ L LQK
Sbjct: 159 LFCRRKSVIQERFRGLDAGSSVMVIGTLVHELLQNVLVGKLSTKDDLQ----LALQKMLS 214
Query: 518 ---NIESLYACGVNENDIH---KTLVEAIPKMLNWIILFKDSQDLNTPTVD-FGSDGLKK 570
+ LYA +++ ++ +T ++ I + + S +N D F S+ +
Sbjct: 215 SSSLVHLLYANNLSQAEVELQLRTFLDPISRFV--------SHYINGEAPDRFPSEAFQG 266
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
+I E+ DIEE W P+ GLKG +D S+RVK ++ + +PLE KTG+ SM
Sbjct: 267 -RIQEIRDIEENLWVPQLGLKGKVDVSVRVKSPNQTEKT----IPLELKTGR---ASFSM 318
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
EH+ Q++LY L M K SGLL Y++ + V R++ L++ RN+ + +
Sbjct: 319 EHKGQLLLYEL-MHSVLGKDTQSGLLLYIREGLLREVPSSRNEQRDLVLLRNDLVYWLTR 377
Query: 691 ASTTQ----------QLPPMLRAYGG------NKECSGLGN------MFDSH-------- 720
+T QLP + + N CS + +SH
Sbjct: 378 EVSTGLENTDPLPQLQLPEPIYHHSACGNCAYNTICSSFAQSDNKLELNESHPIKKLMPQ 437
Query: 721 -IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEH 779
+ HL ++ HW ++ LE + N F + DA
Sbjct: 438 LLSHLLQRDHDYVHHWCSVLALEEQH------------NRQSNQFAPFWTE---DARIRQ 482
Query: 780 QKS-------YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL 832
++ R + V + S LN + D + + D+D +YV++
Sbjct: 483 KQGRAMGHLKLRSGQLVDMKGGRFKQSLELN-EEADLSLDLRLSGFDLD------EYVVV 535
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
S+ S RLAVASG I + + H+ + + L + + E + +DK+E +F
Sbjct: 536 SS-SSRLAVASGFIDLLEKRHLVLRLDRDL----------SKTYEGETFIVDKNE-SQNF 583
Query: 893 SVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK---SLNDDQ 949
S Y + L L Q R IV + P S + PAL K +LN Q
Sbjct: 584 STFNYTNLGLLLSDEPRFQKLREIVVAKIPPTQSKIL----PALILTKGAKMLLALNKIQ 639
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
R A ++ LT + LI G+PGTGKT T+V V+ L + G S+L+T++T+SAVDNLL++L
Sbjct: 640 RAAALRALTTSSHLLIKGLPGTGKTQTLVSLVRVLHLLGKSVLITAHTHSAVDNLLLRLL 699
Query: 1010 SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
++ +R+G + +H ++++ + + + SVEE+ K L+Q +V VTCLG ++ L
Sbjct: 700 PFNLPLMRLGSNSRIHPQLEEISEARLTQDCTSVEELAKVLEQPSIVGVTCLGTSHALFQ 759
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FD CI+DEA Q P L PL F SKFVLVGD QLPP+++S+EAR+ G E +LF R
Sbjct: 760 RRNFDYCIVDEATQVLQPTVLRPLSFCSKFVLVGDPKQLPPVIRSSEARQRGAEETLFHR 819
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
L + A+ +L QYRM + I L+N L Y +L C S+ ++ A++++ W++
Sbjct: 820 LDSQEATAVLSL--QYRMNKTITRLANELTYAGQLQCASETVSGARLQLQPSIKAPKWVQ 877
Query: 1188 EALNPC--RPVIFVNT-DMLP-------------------AYEAKDHQTLN--------- 1216
+ L + V F+NT D L YE + + N
Sbjct: 878 KVLQTHLDQAVFFINTGDCLERCEKLINACMMTTSSFIDQKYEDQGEKPKNKCKKRVSKY 937
Query: 1217 -NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQG 1273
N EA ++ + + L+K+ + IG+I PY +Q L++ +S +E +T+D+YQG
Sbjct: 938 ANVCEAGVVMHLLRYLLKSGFDASQIGVIAPYRAQVELVKKLVSKLDPILECNTVDQYQG 997
Query: 1274 RDKDCILVSFVRSS----ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
RDKD I+ S ++ + R+ S +L D R+ VA+TRAK KLI++G + L +
Sbjct: 998 RDKDLIIYSCSKTGSRVLDMERSRESEILEDQRRLTVAITRAKCKLILMGDIKCLEQYGP 1057
Query: 1330 LKLLINKVGEQ 1340
+ L + E+
Sbjct: 1058 FRELFKHIPER 1068
>gi|125980785|ref|XP_001354415.1| GA15562 [Drosophila pseudoobscura pseudoobscura]
gi|54642723|gb|EAL31468.1| GA15562 [Drosophila pseudoobscura pseudoobscura]
Length = 1113
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 304/1084 (28%), Positives = 508/1084 (46%), Gaps = 160/1084 (14%)
Query: 360 ENVNGTSSCHFLVLEVSEKNRPAD-PVDAKSPYKVLRLLNEQSG-----EERAVHLWEDW 413
E ++ +S H L L + ++ D VD KS Y V L+ + G E + W
Sbjct: 57 EAMDAAASPHKLDLSIWQRCVIEDFEVDMKS-YNVRLLVKKSPGLAEDPETAECLVHSPW 115
Query: 414 FHTVIAPGDTVNVIGEFD-DQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
+ GD V+++ ++ + + +E+ F + +PD LVSGT V S C R++VL E
Sbjct: 116 NMCDMKKGDIVSLLAKWQPSKNAYVIDKEDGFCVTNPDFLVSGTTVMGSLFCRRKTVLQE 175
Query: 473 RLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN--IESLYACGVNE 529
R + + ++GTL+H++FQ + ++ T + ++ +LQ +SLYA + E
Sbjct: 176 RFRGLHWNNRVMIIGTLVHELFQRVVSEQHYTRRHVKTILNYMLQSPSLAQSLYAGDLTE 235
Query: 530 NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYG 589
+++ + + + ++ I+ F L V + +I + + EE W P+ G
Sbjct: 236 DEV----INDLQRFVDPIVRFAKQYVLGEMPVIPSPVNFRG-RIERIENTEENLWVPQLG 290
Query: 590 LKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLK 649
LKG +D S+ V + +PLE KTG+ SMEH Q+ILY ++ S ++
Sbjct: 291 LKGKVDVSVSVTTANDP-------IPLELKTGR---STFSMEHTGQLILYQMMHSALGVE 340
Query: 650 HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQ-------------Q 696
SGLL YL+ + + V +R+++ LIM RN+ A ++K +
Sbjct: 341 -TRSGLLLYLRENMMREVFGKRNEMRDLIMMRNDLAKYLVKEVKSSVADEEDIEDIEDLY 399
Query: 697 LPPMLRAYGGNKECS------------GLGNMFDSH---------IYHLTTAHCSFLRHW 735
LP + + +C + + DSH + HLT F HW
Sbjct: 400 LPEPIHHHNACTQCEYRTLCASFAKRDNILQLGDSHSMKILMPTLLEHLTDEDQEFFHHW 459
Query: 736 DRLIDLEAKEMQVV--KNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV--YH 791
+ LE K + ++ IW + ++ + L S ++ D RF
Sbjct: 460 CGTLALEDKHSRASFKQHSIWTDDPASRQQQGRAIAQLKLYPSQLALET--DGRFEQNLE 517
Query: 792 FVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISR 851
R+ P+ L+ S D G+YV++STES R+AVASG+I +
Sbjct: 518 LAREVDPNIQLHLSGFDV-----------------GEYVVISTES-RMAVASGIIVSLEC 559
Query: 852 FHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSS 910
++V+ + L+ E + +DK + T FS Y NL L + ++
Sbjct: 560 RRLTVALDRDLK----------PQYAKETFILDKHDSQT-FSTFNYTNLGMLLAPTLRAK 608
Query: 911 QLRRMIVDLEAPR-FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMP 969
QLR +IV L+ P FDS L + + LN Q A++ L++ ++LI G+P
Sbjct: 609 QLRSIIVALDPPLPFDSLPDIILTEGLHIL---QFLNKQQNEAVMHCLSSNTHSLIKGLP 665
Query: 970 GTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQ 1029
GTGKT T+V V+ L + S+L+T++T+SAVDNL+ +L + + +R+G+ ++ ++
Sbjct: 666 GTGKTQTLVALVRMLHLLNLSVLITAHTHSAVDNLMNRLMAYGLPMLRLGQSARINDCLE 725
Query: 1030 KHCLSAMNIN----SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
+ +S N+ +V+ + + L+ +V VTCLG +P+ ++ F+ CI+DEA Q LP
Sbjct: 726 E--ISEGNVTRRCRTVDSLTRVLETPAIVGVTCLGTGHPVFRNRTFNYCIVDEATQVMLP 783
Query: 1086 VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM 1145
L PL ++ +FVLVGD QLPP+V+S EAR+ G + SLF RL + P + L QYRM
Sbjct: 784 TILRPLYYSERFVLVGDPDQLPPVVKSREARKRGADESLFERL--DSPNCTAVLCVQYRM 841
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN-------------- 1191
I L+N L Y D L C ++ +A A ++++ + W + L
Sbjct: 842 NSTITRLANRLTYDDGLKCANENVAKAHLQLNYMGHAPVWAQRVLQTHLDNAVVVVDTGD 901
Query: 1192 ---PCRPV---------IFVNTDMLPAYEAKDHQT-----------------LNNPVEAC 1222
PC+ V N D+ Y KD + N E
Sbjct: 902 CSVPCQAVGRGLQWLGKADSNIDL--KYGEKDPEVELADVGQHPAEGRRISQYTNTCEVG 959
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRH--SLSVSSVEIHTIDKYQGRDKDCIL 1280
++ + +L E + +G+I PY +Q L+R S VE +T+D+YQGRDK+ I+
Sbjct: 960 VVMNLLLQLQLAEYDLSTVGVIAPYRAQVELLRRLGGRLDSRVEFNTVDQYQGRDKNIII 1019
Query: 1281 VSFVRSSENP---RNCTSS-LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
S ++ +P + C ++ +L D R+ VA+TRAK+KLI++G L L
Sbjct: 1020 YSCTKTGRDPTEKKRCRAAEILEDKRRLTVAITRAKQKLIILGDVTCLKNYGPFNSLFKN 1079
Query: 1337 VGEQ 1340
V E+
Sbjct: 1080 VPEK 1083
>gi|393905454|gb|EFO21539.2| hypothetical protein LOAG_06948 [Loa loa]
Length = 1039
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 296/1010 (29%), Positives = 484/1010 (47%), Gaps = 121/1010 (11%)
Query: 386 DAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKCDVGRENNF 444
D ++ L + E + + V L W T + G ++ VIG E + + + EN
Sbjct: 83 DNNDEFRELHCICEDTSKIYRVRLEGIWSSTPVKIGSSLRVIGAEMKGEEELLLNWENGV 142
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMK---E 500
LIV +VLV T + SC R++ L K S + +G ++H++FQ + + +
Sbjct: 143 LIVEHNVLVPCTLIVQGISCRRKAALSHYFKGRSSTTKEMFIGNVVHELFQTAVTRSEFD 202
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
+ L+ + + + ++ E +A ++ +I L ++ W+
Sbjct: 203 VSESSLLDLWRKELREQYSEQFFALNLSFQEIEDELCLYFKTIIRWVSTHMPPPRGRNEP 262
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKT 620
+ GS KI +V D+EE W P YG KG ID +++VK K+N ++ P+E KT
Sbjct: 263 LQIGS------KIIKVVDVEESIWNPCYGFKGKIDCTLKVK---KKNGEQKLV-PVELKT 312
Query: 621 GKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMR 680
GK + EH QV+LY L ++ + I++GLL YL + ++ V + DL G++
Sbjct: 313 GK---SNPNTEHVTQVMLYCLALASKQ-GTIENGLLLYLLDEISKTVSPKTIDLKGILHI 368
Query: 681 RNEFANDIIKASTTQQLP-PMLRAYGGN-----KECSGLGN---------MFDSHIYHLT 725
RNE A I A++ LP P L + CS L N F + HL
Sbjct: 369 RNEIAAGI-SATSFDNLPGPTLSTHTCQWCNQALSCSLLQNCSASTVTEIFFQDQLKHLK 427
Query: 726 TAHCSFLRHWDRLIDLEAK---EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
+H + + + R + +E + E E C R + L SI+
Sbjct: 428 PSHIDYFKRFIRWVLMEWRCLTERNATDKENICRRKNSVPCIKVTLDSII---------- 477
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVA 842
R NR + F R+ + + + ++ +++LS ES+ +A+A
Sbjct: 478 QRGNRTIITFRRE------------------GVIDEQYELFMKGDMFLVLSEESEVIAMA 519
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
S + + + ++V N +S++ ++ + +++ E +++ NLV L
Sbjct: 520 SLIFVKENFIDITV-----------NGNSNS-FVVGTTYFLERYETSFKYTLNLGNLVTL 567
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
+ Q S++R +I+D+ P F S ++ + + LN DQ RA++K L + DY
Sbjct: 568 MVDDKQMSKIRSLIIDMRPPAF---SKMKKENIIGISEIVRQLNCDQARAVVKSLMSNDY 624
Query: 963 ALILGMPGTGK--------------TSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
+I G PG+GK TST+ ++ L+ G ++L+TSYT+SAVDNLL KL
Sbjct: 625 TIIEGFPGSGKNGQIIAETKFNYRKTSTLAVLIRCLIHLGRTVLITSYTHSAVDNLLSKL 684
Query: 1009 KSQSID---FVRIGRHEVVHKEIQKHCLSA-----MNINSVEEIKKRLDQVKVVAVTCLG 1060
+ +D +R+G+ + K +Q L A + + V ++ L + +VA TCL
Sbjct: 685 -VEYVDENKILRLGQQTSMKKSVQHLTLEAKLSKHTHTDRVSLMRHILKETPIVACTCLR 743
Query: 1061 I-TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ T+ L + ++F + ++DEA P + + + FVLVGDH QL PLV+S +AR+ G
Sbjct: 744 VATDLLFSYRRFSMTVVDEASLVLEPTVIPAIAASDSFVLVGDHRQLTPLVRSKQARQEG 803
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK--VS 1177
M SL RL+ H A+ L SQYRM + I ELSN L Y +L C ++ +A A S
Sbjct: 804 MAKSLLERLT-VHQSAVITLHSQYRMNRPIAELSNVLFYEGKLRCANNMVAEAIFTNLAS 862
Query: 1178 DLSSCSPWLKEALNPC------RPVIFVNTDML--PAYEAK--DHQTLNNPVEACLIAKI 1227
D S S + K A C V+FV+T P++ A + N EA I +
Sbjct: 863 DPISDSIYSK-AYKLCISNLLNNAVVFVDTQSYKNPSFCATFGKFGEVGNTGEAEFIGGL 921
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ VK + D+GII Y +RH + + VE++T+D+YQGRDK I++SFV +
Sbjct: 922 CKLFVKLGLPKSDLGIICVYRYHVEQLRHIVQ-AGVEVNTVDQYQGRDKSVIVLSFVWAG 980
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
E N S LL D RINVA+TRAK KLI+VG ++LS P + +IN +
Sbjct: 981 E-AENRKSELLADCRRINVAVTRAKHKLILVGCQKSLSSYPAVNAVINAI 1029
>gi|358054960|dbj|GAA99027.1| hypothetical protein E5Q_05716 [Mixia osmundae IAM 14324]
Length = 1084
Score = 351 bits (901), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 220/606 (36%), Positives = 337/606 (55%), Gaps = 45/606 (7%)
Query: 713 LGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL---- 768
L +F S HL H +F R W+RL+ +E K+ K EIW CL
Sbjct: 510 LQKIFASDTDHLEEHHVAFFRKWERLLSMEDKDQICYKREIWTMSAPEREQQGRCLADMR 569
Query: 769 --SSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS 826
S + ++A + K +R Y V S G+S++ PT + C L
Sbjct: 570 VRSLVRVEALEQSDKIHR-----YTCV----------MSRGESIL----PTGLLTCRLSP 610
Query: 827 GDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKD 886
GD V++S + AVA G I +++ + + PG SS + +R+D +
Sbjct: 611 GDPVVVSVQDGATAVARGFILDVTPTELKLGLDHD---PG--SSLRGSKAVK--YRVDLE 663
Query: 887 EIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLN 946
E++ +R NL QL L + +LR ++DL PRF S SQD I + LN
Sbjct: 664 ELLAGTGRLRDNLAQL-LYAHGDVRLRAKVIDLMPPRF--CSRHSQDS----ITTGTGLN 716
Query: 947 DDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLI 1006
DQ A++ LTA DYAL+ GMPGTGKT+ + VK + RG ++LL ++T+SAVD L+
Sbjct: 717 MDQHHALVMALTADDYALVHGMPGTGKTTLIAEMVKTFVARGQTVLLAAHTHSAVDTLVS 776
Query: 1007 KLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
K+ S S+ +R+G + V ++++ L+ ++ S+ ++++ L VVA TCLGI + +
Sbjct: 777 KICS-SVHVLRLGNIDKVREDLRHLTLADSDMQSLADVERMLMAPPVVATTCLGINHIVF 835
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ ++FDVCI+DEA Q LPV+LGPL +A +FVLVGDH+QLPP+V+S +AR+ G + SLF
Sbjct: 836 SRRRFDVCILDEASQVLLPVALGPLRYADRFVLVGDHHQLPPVVRSRQARKEGYDESLFS 895
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-DLSSCSPW 1185
LS P++++ L QYRM + IM L++ Y D+L CGS + A ++++ L + W
Sbjct: 896 LLSTARPESVAHLTIQYRMTEPIMRLASHAFYNDKLVCGSADTATQQLQLPLTLPFANDW 955
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
NP V FV+TD LPA ++ + N+ E ++ K+ +L+ I + IG+IT
Sbjct: 956 CSVLFNPACCVGFVDTDDLPARDSWQSGSWND-FECTVVVKLINDLLARGITQQQIGVIT 1014
Query: 1246 PYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
PY Q L++ L S+ +E+ T DK QGRDKDC+++S VRS+E T LL DW R+
Sbjct: 1015 PYREQVRLLKSMLDSLRGIEVLTADKSQGRDKDCVIISLVRSNEE--GSTGELLKDWRRL 1072
Query: 1305 NVALTR 1310
N ++ R
Sbjct: 1073 NDSIYR 1078
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 181/340 (53%), Gaps = 40/340 (11%)
Query: 388 KSPYKVLRL---LNEQSGEER-AVHLWEDWFHTVIAPGDTVNVIGEFD------DQGK-- 435
+ P K+L L L + + R V+L +DW T + D VNV+G F+ D G
Sbjct: 69 QRPIKILELSPDLRKDACPSRLQVYLEDDWMETQVYADDVVNVVGNFEELPSSEDDGDRS 128
Query: 436 -----CDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLL 489
C + R N+LI+HPDVLV+ TRVA + CPR+++L ERL+ + AL+ G LL
Sbjct: 129 DATLVCRITRSQNYLILHPDVLVTCTRVAETLFCPRKAILQERLRATSEITEALVYGNLL 188
Query: 490 HQIFQ----AGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLN 545
H++ Q AG + +E L + +E L+A ++ + L+ +
Sbjct: 189 HEVMQRCLVAGRFDLAARTQAIE--GLLANTRCLERLWALSLDRAAVQSELLSRSAGLPT 246
Query: 546 WIILFKDSQD-------LNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASI 598
W + +S++ ++ +VD ++ L + ++ DIEE W+P+ GLKG IDAS+
Sbjct: 247 WAERYCNSEEPKAEAKLVDPRSVDKTAE---TLSLRKILDIEEDIWSPRLGLKGKIDASV 303
Query: 599 RVKI--ESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLL 656
V++ E+ R+++ I PLE KTG++ S+M HRAQ +LYTLLMSERY I GLL
Sbjct: 304 EVQVHDETSRSDVVA-ISPLEIKTGRM---LSNMIHRAQTMLYTLLMSERYDAPIALGLL 359
Query: 657 YYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ 696
Y Q + V R++L GL++ RN N + A ++
Sbjct: 360 VYSQQEHAYKVDALRNELRGLLISRNTMVNYLATAPARRE 399
>gi|312080275|ref|XP_003142530.1| hypothetical protein LOAG_06948 [Loa loa]
Length = 1032
Score = 351 bits (900), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 294/1009 (29%), Positives = 483/1009 (47%), Gaps = 120/1009 (11%)
Query: 386 DAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKCDVGRENNF 444
D ++ L + E + + V L W T + G ++ VIG E + + + EN
Sbjct: 83 DNNDEFRELHCICEDTSKIYRVRLEGIWSSTPVKIGSSLRVIGAEMKGEEELLLNWENGV 142
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMK---E 500
LIV +VLV T + SC R++ L K S + +G ++H++FQ + + +
Sbjct: 143 LIVEHNVLVPCTLIVQGISCRRKAALSHYFKGRSSTTKEMFIGNVVHELFQTAVTRSEFD 202
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
+ L+ + + + ++ E +A ++ +I L ++ W+
Sbjct: 203 VSESSLLDLWRKELREQYSEQFFALNLSFQEIEDELCLYFKTIIRWVSTHMPPPRGRNEP 262
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKT 620
+ GS KI +V D+EE W P YG KG ID +++ E K ++P+E KT
Sbjct: 263 LQIGS------KIIKVVDVEESIWNPCYGFKGKIDCTLKKNGEQK-------LVPVELKT 309
Query: 621 GKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMR 680
GK + EH QV+LY L ++ + I++GLL YL + ++ V + DL G++
Sbjct: 310 GK---SNPNTEHVTQVMLYCLALASKQ-GTIENGLLLYLLDEISKTVSPKTIDLKGILHI 365
Query: 681 RNEFANDIIKASTTQQLP-PMLRAYGGN-----KECSGLGN---------MFDSHIYHLT 725
RNE A I A++ LP P L + CS L N F + HL
Sbjct: 366 RNEIAAGI-SATSFDNLPGPTLSTHTCQWCNQALSCSLLQNCSASTVTEIFFQDQLKHLK 424
Query: 726 TAHCSFLRHWDRLIDLEAK---EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
+H + + + R + +E + E E C R + L SI+
Sbjct: 425 PSHIDYFKRFIRWVLMEWRCLTERNATDKENICRRKNSVPCIKVTLDSII---------- 474
Query: 783 YRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVA 842
R NR + F R+ + + + ++ +++LS ES+ +A+A
Sbjct: 475 QRGNRTIITFRRE------------------GVIDEQYELFMKGDMFLVLSEESEVIAMA 516
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
S + + + ++V N +S++ ++ + +++ E +++ NLV L
Sbjct: 517 SLIFVKENFIDITV-----------NGNSNS-FVVGTTYFLERYETSFKYTLNLGNLVTL 564
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
+ Q S++R +I+D+ P F S ++ + + LN DQ RA++K L + DY
Sbjct: 565 MVDDKQMSKIRSLIIDMRPPAF---SKMKKENIIGISEIVRQLNCDQARAVVKSLMSNDY 621
Query: 963 ALILGMPGTGK----------TSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS 1012
+I G PG+GK TST+ ++ L+ G ++L+TSYT+SAVDNLL KL +
Sbjct: 622 TIIEGFPGSGKKINLNKIDEKTSTLAVLIRCLIHLGRTVLITSYTHSAVDNLLSKL-VEY 680
Query: 1013 ID---FVRIGRHEVVHKEIQKHCLSA-----MNINSVEEIKKRLDQVKVVAVTCLGI-TN 1063
+D +R+G+ + K +Q L A + + V ++ L + +VA TCL + T+
Sbjct: 681 VDENKILRLGQQTSMKKSVQHLTLEAKLSKHTHTDRVSLMRHILKETPIVACTCLRVATD 740
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
L + ++F + ++DEA P + + + FVLVGDH QL PLV+S +AR+ GM S
Sbjct: 741 LLFSYRRFSMTVVDEASLVLEPTVIPAIAASDSFVLVGDHRQLTPLVRSKQARQEGMAKS 800
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK--VSDLSS 1181
L RL+ H A+ L SQYRM + I ELSN L Y +L C ++ +A A SD S
Sbjct: 801 LLERLT-VHQSAVITLHSQYRMNRPIAELSNVLFYEGKLRCANNMVAEAIFTNLASDPIS 859
Query: 1182 CSPWLKEALNPC------RPVIFVNTDML--PAYEAK--DHQTLNNPVEACLIAKITQEL 1231
S + K A C V+FV+T P++ A + N EA I + +
Sbjct: 860 DSIYSK-AYKLCISNLLNNAVVFVDTQSYKNPSFCATFGKFGEVGNTGEAEFIGGLCKLF 918
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
VK + D+GII Y +RH + + VE++T+D+YQGRDK I++SFV + E
Sbjct: 919 VKLGLPKSDLGIICVYRYHVEQLRHIVQ-AGVEVNTVDQYQGRDKSVIVLSFVWAGE-AE 976
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
N S LL D RINVA+TRAK KLI+VG ++LS P + +IN + ++
Sbjct: 977 NRKSELLADCRRINVAVTRAKHKLILVGCQKSLSSYPAVNAVINAIPKE 1025
>gi|299739000|ref|XP_001834960.2| DNA replication helicase dna2 [Coprinopsis cinerea okayama7#130]
gi|298403575|gb|EAU86842.2| DNA replication helicase dna2 [Coprinopsis cinerea okayama7#130]
Length = 1482
Score = 348 bits (894), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 253/797 (31%), Positives = 359/797 (45%), Gaps = 197/797 (24%)
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKS 782
HL +H F R W+RL+ LE K++ K+E+W CLS +V+ +H S
Sbjct: 321 HLNPSHALFFRTWERLLSLEEKDLVRYKSELWRVGAVEREKRGRCLSGMVMKQDLKHPNS 380
Query: 783 ---------------------------YRDNRFVYHFVRQH---MPSPN-------LNAS 805
R ++F Y F R PS + S
Sbjct: 381 GATSTSQSATVGELDLHSENDANQVTGSRIHKFTYTFTRAKSFVFPSSQPSSQFFPFSTS 440
Query: 806 DGDSLIGAAIPTKDMDCTL-----RSGDYVILSTESDRLAVASGLITEISRFHVSVS--- 857
S + P++ TL GD + +S E LA+ G I ++ ++V
Sbjct: 441 QPSSQPASQHPSQTPPPTLLHTHLSPGDAITISIEPYLLALVQGYILSLTADEITVGVDH 500
Query: 858 -----------------------------------FSKPLRLPGRNSSSDADSLLHE-VW 881
FS +RL N++ + + E ++
Sbjct: 501 VLDLDALKERVNVLKARRGGSPSTRSTPASWNLDPFSSQVRL---NTNGETNGDEEELIF 557
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDP------- 934
RIDKDE+ S MR NL QLF + R +IVDL P F V P
Sbjct: 558 RIDKDELFGGMSRMRNNLAQLFYVEGDHKR-RSLIVDLREPVFGPVPVIPGLPFPSTSST 616
Query: 935 ---------------------ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGK 973
A S + +LN Q A+ KVL+A+DYALILGMPGTGK
Sbjct: 617 SSSPPPPSPPSPPSPPTPPSTAASIQQATSTLNPTQLSALHKVLSAQDYALILGMPGTGK 676
Query: 974 TSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID------------------- 1014
T+ + ++ L+ G ++LL SYT+SAVD++L KL D
Sbjct: 677 TTVIAALIRVLVALGKTVLLASYTHSAVDSILRKLSESEEDEEKGQVTEEGKGRANEKRK 736
Query: 1015 --------FVRIGRHEVVHKEIQKHCLSAM-NINSVEEIKKRLDQVKVVAVTCLGITNPL 1065
+R+G + VH + +++ L A +V ++K+ VVA TCLG+ +P+
Sbjct: 737 NSGFWDVKVLRLGNIDKVHPDARRYTLEARPKAQTVAGLEKQWLSPPVVASTCLGVDHPI 796
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
T +KFD CI+DEA Q TLP LGPL A KFVLVGDH+QLPPLV++ +AR G+++SLF
Sbjct: 797 FTKRKFDYCIVDEASQITLPTCLGPLRHADKFVLVGDHFQLPPLVKNPQARTGGLDVSLF 856
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD------- 1178
R LS HPQ+++ L QYRM IM LSN LIY DRL CGS+ +A ++++ D
Sbjct: 857 RLLSSAHPQSVTDLTHQYRMNASIMLLSNKLIYDDRLKCGSESVAGRRLELPDGGMAVRR 916
Query: 1179 ---------------------------LSSCSPWLKEALNPCRPVIFVNTDMLP--AYEA 1209
+ C WL + L+P IFV+T L AY++
Sbjct: 917 MHRRLGRMRRVQGLGEPGDDRLCNGKNENGC--WLSKLLDPSTKAIFVDTSTLGSVAYDS 974
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL----------- 1258
+ + N EA L+ + + LVK+ + +G+I+ Y Q L+ L
Sbjct: 975 RVGDLVQNTTEASLVVQFVEALVKSGVRQDQVGVISLYRQQVKLLGEKLKNVRGSGHEGG 1034
Query: 1259 -----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
+ VE+ T DK QGRDKDCI+VS VRS NP N L+ DW R+NV+ TRA+
Sbjct: 1035 VGTGGGLDGVEVLTADKSQGRDKDCIVVSLVRS--NPENQIGELVRDWRRMNVSFTRARS 1092
Query: 1314 KLIMVGSCRTLSKVPLL 1330
KL++ GS TL LL
Sbjct: 1093 KLVIFGSRSTLQSDALL 1109
Score = 90.1 bits (222), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 80/163 (49%), Gaps = 38/163 (23%)
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK-----------------RNEINGMI 613
L IS + ++EE W+PKYGLKG +D ++ I + + M+
Sbjct: 66 LAISRIHEVEEDIWSPKYGLKGKLDVTVEAVITESSSPPGRPGMAGKPGFFGKGTLPSML 125
Query: 614 -----------LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSD 662
P E KTG+ G MEHRAQ +LYTLL SERY +D GLL+Y Q D
Sbjct: 126 GNGIGPTTSGPRPFEIKTGRSMGG---MEHRAQTMLYTLLASERYGVEVDKGLLFYTQKD 182
Query: 663 QTQGVMVQRS--DLVGLIMRRNEFANDII-----KASTTQQLP 698
+ V V R ++ GL++ RNE AN ++ A+ QLP
Sbjct: 183 TGEIVQVPRGRNEIRGLLIMRNELANWMMVRMRDSATDPAQLP 225
>gi|157117716|ref|XP_001658902.1| DNA replication helicase dna2 [Aedes aegypti]
gi|108884569|gb|EAT48794.1| AAEL000201-PA, partial [Aedes aegypti]
Length = 1097
Score = 347 bits (891), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 288/1030 (27%), Positives = 481/1030 (46%), Gaps = 167/1030 (16%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKC-DVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W ++ G TV++ FD + ++ ++ +PD LVSGT V + C RR VL
Sbjct: 77 WISVQLSEGSTVSLKATFDRTNNVYRINAQDGMIVTNPDHLVSGTTVVGALYCHRRGVLQ 136
Query: 472 ERLKCSERS----------------------ISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
ER + + +GT++H++ Q L ++ + +
Sbjct: 137 ERFRGVDTDSQIVSNPMEYFNPFIMRKFPYFFQMTVGTIVHEVLQKTLRNKLTDLSDIVA 196
Query: 510 YARLVLQKN--IESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDG 567
+ +L LYAC ++ + K + PK+ ++I + V G
Sbjct: 197 AGQELLNSEGMAHVLYACKMSRQEAMKEIESFYPKIHDFI-----KNHIKGTIVLVGQ-- 249
Query: 568 LKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQ 627
+ ++I + DIEE W + GLKG ID ++ K + ++PLE KTG+
Sbjct: 250 VSDIEIFAIKDIEENIWCHQLGLKGKIDVTVEAKCSGDKQV---QLMPLELKTGR---AS 303
Query: 628 SSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN- 686
S EH+ QV+LY ++M+ H+D G+L YL+ + V+ R+ LIM RNE A+
Sbjct: 304 FSAEHKGQVVLYEMMMN-IVGHHVDKGILLYLREGKCASVVGNRNMKRDLIMLRNEVAHF 362
Query: 687 --------DIIKASTTQQLPPMLRAYGGNKECS-----------------------GLGN 715
D + T+ + P+ CS +
Sbjct: 363 LSRGIPNTDSAQFDLTKDILPLPEPLNNQHVCSRCPYSVICTTYLRHEKREFPDGHAIKL 422
Query: 716 MFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ--VVKNEIWCSRGSGGNHFTGCLSSIVL 773
+ + + HL+ H + W LI LE +E + +W ++ H G ++I L
Sbjct: 423 ISEESLSHLSDQHIDYFIRWAGLIFLEDEEARKGFHIKHLW-TKTPEVRHAMG-RAAINL 480
Query: 774 DASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSL-IGAAIPTKDMDCTLRSGDYVIL 832
+ + ++ N +H + +L+A DSL + ++ T L +Y+I
Sbjct: 481 RLT---EWGFKSNDTYFH-------TFSLDADKNDSLNVSHSLSTSQ----LPVNEYLIC 526
Query: 833 STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF 892
ST S+R+AVASG + I + V+++ + L + EV+ +DK TS
Sbjct: 527 ST-SNRIAVASGRVVSIGKRQVTINLERDL----------SKYYAKEVFHLDK---YTSR 572
Query: 893 SVMRYNLVQ---LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQ 949
+ M +NL L S +S +LRR+I+D E P F + I ++LN Q
Sbjct: 573 TQMTFNLTNIGVLLDNSERSDKLRRIIIDRERPTFTRTVPAAVSAEAKQIL--QNLNKHQ 630
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
+ A++ + K Y L G+PGTGKT T++ ++ L+ SIL+TS T+SAVDN+L++L
Sbjct: 631 KIAVLTAVGTKTYCLFKGLPGTGKTQTVIALIRLLVAMNKSILITSNTHSAVDNVLLRLL 690
Query: 1010 SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
+ +I F+R+G ++ + + + + N ++ EE+ + ++V VTCLG +P+L
Sbjct: 691 TYNIKFMRLGSVSRINPALTEFSENRLTENCSTPEELAAVYNSHQIVGVTCLGADHPMLV 750
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FD CI+DEA Q + PL+ + KFVL+GD QLPP+++S +A++ G + SLF R
Sbjct: 751 QRTFDFCIVDEATQVFQSAVIRPLLSSDKFVLIGDPDQLPPVIKSRKAKDLGADESLFFR 810
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV------SDLSS 1181
L E Q+ L +QYRM + I +L+N Y +L C ++E+AN+ +K+
Sbjct: 811 LDAE--QSCCVLPTQYRMNKIITKLANDFSYKGKLLCATEEVANSSVKLPMAQLMQQKHK 868
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-------------------NPVEAC 1222
WL + + V + L + K QT N N EA
Sbjct: 869 SEKWLLRTIASHLELSVVLINTLNTF--KSSQTYNASRKRESGQQGEQPKAIYENYCEAA 926
Query: 1223 LIAKITQELV--------------KNEIEGKDIGIITPYNSQANLIRHSLSVSS----VE 1264
++ + LV + I+G IG+I P+ +Q +L+R+ L++ +E
Sbjct: 927 IVIYVIMALVDVCVLQLISSIHFLQCGIDGSSIGVIAPFRAQVDLLRYYLTLIEKDLDIE 986
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSENPRNCTS--------SLLGDWHRINVALTRAKKKLI 1316
I+T+D+YQG+DKD IL S +S+ NP N + +L D R+ VA+TRAKKKLI
Sbjct: 987 INTVDQYQGKDKDIILYSCTKSN-NPDNADAQTSTPSEYEILEDQRRLTVAITRAKKKLI 1045
Query: 1317 MVGSCRTLSK 1326
+VG + L K
Sbjct: 1046 IVGDTQCLEK 1055
>gi|34783461|gb|AAH41115.1| DNA2 protein [Homo sapiens]
Length = 435
Score = 341 bits (874), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 194/420 (46%), Positives = 260/420 (61%), Gaps = 23/420 (5%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN QR+A+ KVL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTSYT+SAVDN+
Sbjct: 1 LNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILYACGFSVLLTSYTHSAVDNI 60
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L+KL I F+R+G+ + VH IQ+ C S +I S+ +++ + +VA TC+
Sbjct: 61 LLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLIVATTCM 119
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV + EAR G
Sbjct: 120 GINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNREARALG 179
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
M SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA I +
Sbjct: 180 MSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAVINLRHF 238
Query: 1180 S------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
S +PWL P PV F+NTD +PA E + ++N EA LI +
Sbjct: 239 KDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEAKLIVFL 298
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
T VK DIGII PY Q +I L S+ VE++T+DKYQGRDK +LVSFVR
Sbjct: 299 TSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVR 358
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
S N LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N + + I++
Sbjct: 359 S--NKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNSEKLIID 416
>gi|195385250|ref|XP_002051319.1| GJ15173 [Drosophila virilis]
gi|194147776|gb|EDW63474.1| GJ15173 [Drosophila virilis]
Length = 1115
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 295/1034 (28%), Positives = 492/1034 (47%), Gaps = 141/1034 (13%)
Query: 401 SGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPDVLVSGTRVA 459
+G HL W T + PGD +++ + G V +E+ F ++HPD+L+S T V
Sbjct: 101 NGATAVCHLQAPWNQTPVQPGDLLSLKAHWQPALGAYVVNKEHGFCVIHPDLLISSTSVT 160
Query: 460 ASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN 518
S C R++VL +R + + + + ++ GTL+H++ Q L K + + + +L+
Sbjct: 161 GSLFCRRKAVLQDRFRGVDAANAVMIIGTLVHELLQTVLSKRLRAKAQVTDALHEMLRSA 220
Query: 519 --IESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ--DLNTPTVDFGSDGLKKLKIS 574
+ LYA ++ +I L + + ++ ++ + + + + P + G +I
Sbjct: 221 SLAQLLYAGQLSRAEIELQLYKFVEPIVAFVEQYVEGKMPSVQPPEMYTG-------RIE 273
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+ DIEE W P+ GLKG +D S+RV RN+ + +PLE KTG+ SMEH+
Sbjct: 274 EIHDIEENLWVPQLGLKGKVDVSVRV-----RNK--KLPIPLELKTGR---ASFSMEHKG 323
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTT 694
Q++LY L+ S + GLL YL+ + V R++ L++ RN+ A+ + + +
Sbjct: 324 QLLLYQLMHSA-LGQETRCGLLLYLREGIVREVPEGRNEQRDLVLLRNDLAHYLTREA-- 380
Query: 695 QQLPPMLRAYGGNKECSGLGNMFD--SHIYH--------LTTAHCSFLRHWDRLIDLEAK 744
QLP ++ +++ L F+ I H T CSF +L E+
Sbjct: 381 -QLPAAKQSISLSEKPGKLLQPFELPEPISHHSACGNCAYATICCSFASTDAQLQLSESH 439
Query: 745 EMQVVKNEIWCSRGSGGN----HFTGCLSSIVLDASNEHQ----------KSYRDNRFVY 790
++ + ++ G H+ G L+ A HQ K + R +
Sbjct: 440 PLRRLMPQVLEHLGQSDYEYVLHWCGLLALEEQQARQSHQLRALWTDTPAKRQQQGRAIQ 499
Query: 791 HFVRQHMPSPN-LNASDG---DSLIGAAIPTKDMD---CTLRSGDYVILSTESDRLAVAS 843
+P + + DG L+ +A K+++ C G+YVI+S+ S RLA+A+
Sbjct: 500 QL---QLPKDHQTHLVDGRYEQKLVLSAQADKEINLTLCGFELGEYVIVSSTS-RLAIAA 555
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G IT + + V + L GR E + +DK E + S NL QL
Sbjct: 556 GYITALETRSLCVQLERDL---GRRYPL-------ESFIVDKHESQSFASFNYTNLAQLL 605
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQRRAIIKVL 957
S +++QLR ++V P Q L + K LN Q+ A ++ L
Sbjct: 606 APSERAAQLRSIVVAQTPP--------MQHKMLPRVIGSKGGPILRPLNKVQQMAALRAL 657
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
T + LI G+PGTGKT T+V V+ L + S+L+T+ T+SAVDNLL++L ++ +R
Sbjct: 658 TTNTHLLIKGLPGTGKTETLVAIVRLLHLMERSVLITAQTHSAVDNLLLRLLPYNLPLLR 717
Query: 1018 IGRHEVVHKEI----QKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
+G VH ++ + H +A +VE++ + L + +V VTCLG + L ++FD
Sbjct: 718 LGNSARVHPQLHDISEAHLTAA--CETVEQLTETLQKPSIVGVTCLGAGHALFQQRQFDY 775
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
CI+DEA Q P L L S+F+LVGD QLPP+V++ EAR G + +LF+RL E
Sbjct: 776 CIVDEATQVLQPTVLRALSHCSRFILVGDPEQLPPIVRNREARLRGADETLFQRLDCEAA 835
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP- 1192
A+ L QYRM + I L+N L YG+ L C +D + NAK+++ + W+ L
Sbjct: 836 TAVLTL--QYRMNRTITRLANQLTYGEALQCANDSVENAKLQLEPPTEACLWVHRTLQTH 893
Query: 1193 ----------------CRPVIFVNTDMLPA-------YEAKDHQT--------------- 1214
C+ +T + Y + QT
Sbjct: 894 LEQSVFLLDTSDCAQRCQDYAECSTQLGTTSATIEQHYGEAEEQTTQPSETQPGRSRRAP 953
Query: 1215 -LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTIDKYQ 1272
+N EA ++ + ++L+K + + IG+I PY +Q L+R ++ VE +T+D+YQ
Sbjct: 954 KYSNYCEAAIVLHLLRQLLKADYDASRIGVIAPYRAQVELLRKLGEHMTGVEFNTVDQYQ 1013
Query: 1273 GRDKDCILVSFVRSSENP------RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
GRDK+ I+ S ++ R+ + +L D R+ VA+TRAK KLI++G L +
Sbjct: 1014 GRDKNLIIYSCTKTGGTAAELSMERSREAEILEDQRRLTVAITRAKHKLILLGDVNCLER 1073
Query: 1327 VPLLKLLINKVGEQ 1340
K L N + E+
Sbjct: 1074 YTPFKSLFNHIPER 1087
>gi|164661731|ref|XP_001731988.1| hypothetical protein MGL_1256 [Malassezia globosa CBS 7966]
gi|159105889|gb|EDP44774.1| hypothetical protein MGL_1256 [Malassezia globosa CBS 7966]
Length = 1210
Score = 340 bits (872), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 215/637 (33%), Positives = 335/637 (52%), Gaps = 72/637 (11%)
Query: 711 SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSS 770
S + +++ HLT +F HWD L+ E + + ++E+W C+ +
Sbjct: 552 SPIADLYADSTDHLTPEDMAFFAHWDALLSHEERGLLRFQHELWTMPADARAATGRCVPN 611
Query: 771 IVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV 830
+++ +R+ D L +IP + D V
Sbjct: 612 LMM-------------------IRKM-----------DGLCAFSIPASKV--AFMPEDVV 639
Query: 831 ILSTESDRLA--VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEI 888
++ ++ A + ++ ++FHV S L L S + +R+D D+I
Sbjct: 640 CIAVQTPVTAFLLRGRVVASTTQFHVRPESSLDLALTQYESQYGKP----QTFRVDLDDI 695
Query: 889 MTSFSVMRYNLVQLFLQ--SAQSSQLRRMIVDLEAPRF----DSGSVFSQDPALSYIWSE 942
M+ V RYNL LF + + Q + LRR +V L+ P++ D + F Q A
Sbjct: 696 MSVMGVPRYNLACLFYKQVTPQITMLRRRVVHLDTPQWTCINDKMAAFVQRHA------- 748
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
S N DQR AI + L A+DY LILGMPGTGK++T+ V+ L G +LL S+T+SAVD
Sbjct: 749 ASCNADQRHAIERALCARDYTLILGMPGTGKSTTIAVLVRILADMGQCVLLCSHTHSAVD 808
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN---SVEEIKKRLDQVKVVAVTCL 1059
++ KL I +R+G +H + C A + S E + + ++VA TCL
Sbjct: 809 TIVSKLLD--IPVLRLGPLSRIHPRVHA-CALATKLGPQASAEALVDLVQDAQIVAATCL 865
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ L + FDVCIMDEA Q T+P LGPL A +FV++GDH+QL P+V++T+A +G
Sbjct: 866 ATNDAALARRTFDVCIMDEASQITVPTCLGPLRLADRFVMIGDHHQLTPVVRNTDAASHG 925
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
M +SLF+RL + HP +++ L QYRM IM LSNAL+Y RLSCGS+++A A++ +
Sbjct: 926 MSVSLFQRLCKAHPDSVAMLCMQYRMNAEIMALSNALVYEGRLSCGSEDVACARLIIPSC 985
Query: 1180 -----------SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKIT 1228
+ + L+ ++P RP +FV+TD + A E++ + N EA +A+I
Sbjct: 986 DQKKDCATDNEAGIAAMLEAIIDPSRPCVFVDTDPVHAEESRTDTLVENEAEAAWVARII 1045
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+ L + ++G D+G++TPY Q+ +R + +S E+ TID+ QGRD +LVS VRS
Sbjct: 1046 EALRQAGVQGTDVGVLTPYRQQSKRLRD--ACASTEVLTIDQAQGRDWPVVLVSLVRS-- 1101
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
N + LL D R+NV +TRAK KLI+VGS T++
Sbjct: 1102 NTAHVAGELLRDRRRVNVMVTRAKTKLILVGSQSTMA 1138
Score = 137 bits (344), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 158/326 (48%), Gaps = 49/326 (15%)
Query: 406 AVH----LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF-----------LIVHPD 450
AVH L + W T + P DTV++IGE+D + + F L+VHPD
Sbjct: 129 AVHGYARLRDQWESTFVKPDDTVHLIGEWDSEDGVPCMILSTFSHSSTKESVRLLVVHPD 188
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTM----- 504
V++S +R+A+ SC R+S+L ER++ +E + A+LGT++H + QA L I M
Sbjct: 189 VIISSSRLASVASCMRKSMLQERIRSPTESTYVAVLGTMVHSLLQACLTGSIDPMHESPA 248
Query: 505 -------------------KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLN 545
F+ L++ ++L + + L+ A+P ++
Sbjct: 249 PSPEVSAPAKWDRIGNFSCAFITAEIERQLEEAQQALVLVDTKTDTARRDLIAAVPSLVR 308
Query: 546 WIILF----KDSQDLNTPTV-DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRV 600
+ F DS+ + D + ++ I+ + E P YGLKG +D +
Sbjct: 309 FAETFLSFRDDSRRKAMAQIHDTRMNAHIRMCITRIIGTESDILCPMYGLKGRLDLCLEA 368
Query: 601 KIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQ 660
+IE+ ILP+E KTG+I SSMEH AQ LYT+++++ Y +D GLL+Y+Q
Sbjct: 369 EIETSAGG-RKCILPMEVKTGRI---TSSMEHTAQTSLYTMILADAYGVSVDYGLLFYVQ 424
Query: 661 SDQTQGVMVQRSDLVGLIMRRNEFAN 686
+ + + V ++ LIM RNE A+
Sbjct: 425 NSEIRPVHCNTKEVRSLIMARNEMAS 450
>gi|258570319|ref|XP_002543963.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904233|gb|EEP78634.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1408
Score = 340 bits (871), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 225/669 (33%), Positives = 349/669 (52%), Gaps = 74/669 (11%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E++ RA+ L E WF G +++IGEF+ G+C V NN +I+HPD
Sbjct: 525 KVLLVQEEKTKLNRAITLRESWFDMPCKKGFYLHLIGEFNTAGQCIVDDANNMIIIHPDH 584
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SFSC RR+VL +R+K SE S + G +LH+IFQ + +L+E
Sbjct: 585 LISATVVADSFSCQRRAVLQDRVKATSEASKPQVYGHILHEIFQQAMKANRWDFAWLKEV 644
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L K +ESLY V + L +P + W +F Q + ++ + K
Sbjct: 645 IDETLSKYLESLYEIQVELPEAAAYLQAKMPMLKAWADVFVRYQPTSESVIEDRNGTTAK 704
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I ++ ++EE W+P YGLKG IDA++ V ++ E + +PLE KTG+ ++
Sbjct: 705 LCIDKLLEVEEHVWSPMYGLKGNIDATVEVVLQDG-AEQKTLTVPLELKTGR---NNTNE 760
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
HRAQ LYTLL+S+RY + G+L+YL+ +T V +++ +I +RN A I
Sbjct: 761 AHRAQTALYTLLLSDRYDIDVTFGILFYLEVSKTHRVRAIPAEIRQMIQQRNRLAGYI-- 818
Query: 691 ASTTQQLPPMLR-------AYG-------------GNKECSGLGNMFDSHIYHLTTAHCS 730
LPPML+ Y G+ E SG+G F HL+ +H +
Sbjct: 819 -RERLDLPPMLKNPRMCNQCYAKSACFVYHKLMDSGDGETSGMGKSFVELAGHLSPSHQA 877
Query: 731 FLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASN--EHQKSYRDNRF 788
F + WD L+ E KE + E+W C +V++ + E + + NRF
Sbjct: 878 FFKKWDLLLTQEEKETMKFRRELWTMLSDEREAVGRCFGKVVIEPESAFEDPEGPKINRF 937
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
Y FV+ H +P + +D +G D +++S E A+A+G + +
Sbjct: 938 RYTFVK-HKATPGFSFTDSQITVG---------------DPIVVSDEKGHFALANGYLVQ 981
Query: 849 ISRFHVSVSFSKPL-----RLPG----RNSS----------SDADSLLHE----VWRIDK 885
S ++V+ + L R+PG RN S AD L E ++R+DK
Sbjct: 982 ASSKRLTVAVDRRLHNARTRMPGFDPVRNQSYAGIMEVGNRGRADYLAAEEDVVLYRVDK 1041
Query: 886 DEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS 944
DE + +R NLV + ++ +SS+LR +IV+ P F S S P LS ++ +
Sbjct: 1042 DEFSNGMATVRNNLVCMMDKTPLRSSRLRELIVEGVPPVFKS---LSSVPKLSAS-AQAT 1097
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN DQ++AI KV++AKDYAL+LGMPGTGKT+T+ ++A++ +G S+LLTSYT++AV+N+
Sbjct: 1098 LNVDQKQAIEKVMSAKDYALVLGMPGTGKTTTIAQIIRAIVSQGKSVLLTSYTHTAVENI 1157
Query: 1005 LIKLKSQSI 1013
L+K++ I
Sbjct: 1158 LLKIRDDKI 1166
Score = 102 bits (254), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
Query: 1198 FVNTDMLP--AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
VNTD+L A E+ + + NP+EA L ++ + L+ I ++IG++T Y SQ L++
Sbjct: 1175 LVNTDLLKPEAVESANGSRIVNPIEALLCTQLVEALISTGISPREIGVVTLYRSQLALLK 1234
Query: 1256 HSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
L + +E+HT D++QGRDK+ I++S VRS N + LL DW R+NVA TRA+
Sbjct: 1235 QKLRHHLPDLEMHTADRFQGRDKEVIIMSCVRS--NADHNVGELLRDWRRVNVAFTRART 1292
Query: 1314 KLIMVGSCRTL 1324
KL++VGS TL
Sbjct: 1293 KLLIVGSKTTL 1303
>gi|17533987|ref|NP_496516.1| Protein DNA-2, isoform b [Caenorhabditis elegans]
gi|5824500|emb|CAB54253.1| Protein DNA-2, isoform b [Caenorhabditis elegans]
Length = 1069
Score = 338 bits (868), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 289/991 (29%), Positives = 470/991 (47%), Gaps = 120/991 (12%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD--VGRENNFLIVHPDVLVSGT 456
++ G R V+L + W I G T+N+IG G D V + +I++PD LV T
Sbjct: 123 DKEGTTRIVYLQDHWSEMSIEAGSTINLIGA-QAWGDRDFLVNDDVGIVILNPDALVPCT 181
Query: 457 RVAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARL 513
VA++ C R++VL+++ K S A LLGT++H+IFQ + K+ P M+ L +
Sbjct: 182 AVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRPVMENDLMKIWNK 241
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI--------ILFKDSQDLNTPTVDFGS 565
K E L A + + L + WI F + L +
Sbjct: 242 QAPKYAEELVALSFTPSCLDAELQPYFSIICGWINKHYPLSNSFFSKREPLPS------- 294
Query: 566 DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
K ++ EV DIEE W K GLKG ID ++R K G + LE KTGK
Sbjct: 295 ----KSELLEVYDIEENIWDSKLGLKGKIDVTMRTKSR-------GGMESLELKTGK--- 340
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S EH QV+LY ++ S RY + I G + YL+ + V + +DL+G++ +RN+ +
Sbjct: 341 SSCSSEHTGQVLLYCMMQSSRYEQPIGPGNILYLKDGASHCVTPRAADLLGVLQQRNKLS 400
Query: 686 NDIIKASTTQQLP---------------PMLRAYGGNKEC-----SGLGNMFDSHIYHLT 725
+ TT LP M Y +E + N ++ + HL
Sbjct: 401 VHF-EDPTTSNLPDPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMKNFAENEMAHLE 459
Query: 726 TAHCSFLRHWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
H + +W R I E K M ++W CLS + S E
Sbjct: 460 QNHIEYAANWIRWISAEWKCERERMTSQNKDLWLKSVQERVEEGTCLSDL-HPVSEEMSN 518
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
S + + F R+ + S N T R GD +LS + +A+
Sbjct: 519 S---QKIIISFSRKFLKSSNTP-------------------TFRPGDVCLLSNKK-HIAI 555
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
LI E+S V S + R + + +DK M++ S NLV
Sbjct: 556 GFALIDEVSDDQQIVKISTDKTIKSRYEAP---------FHLDKYTSMSTHSTTLGNLVY 606
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L +LR ++VDL P + F+ PA+ I + LN++QR+A++ L +D
Sbjct: 607 LLQNDEIGKRLRNILVDLLPPIIMDATGFNLTPAIKKIIIKAKLNNEQRKAVVHALATED 666
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ--SIDFVRIG 1019
+ ++ G+PG+GKT+ + ++ L+ +LL ++T+SAVDN+L KL + + +R+G
Sbjct: 667 FMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLG 726
Query: 1020 RHEVVHKEIQKHCLSAMNINSVEE-----IKKRLDQVKVVAVTCLGITNPLL-TDKKFDV 1073
+ +I+K L A N E ++K + +VA TC + LL + + FDV
Sbjct: 727 SSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELLFSYRHFDV 786
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
I+DEA P+ L L ++KFVLVGD QL PLV S +A++ G IS +L + HP
Sbjct: 787 VIVDEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHP 846
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK-----VSDLSSCSPWLKE 1188
+ +L SQYRM + I LS+ L Y +RL CG++ ++ + + + + S +++
Sbjct: 847 GVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRK 906
Query: 1189 AL-----NPCRPVIFVNTD--MLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGK 1239
AL + C +F++T + + +D + + N EA LI+++ Q+ V + ++
Sbjct: 907 ALSGDIKDSC---VFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPH 963
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+IG+++ Y Q + IR L+ +E++TID YQGR+K I+ S ++ + + S LL
Sbjct: 964 EIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKK--SELLK 1021
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
D R+NVALTRA++KL++VG + +P+L
Sbjct: 1022 DERRVNVALTRARQKLVVVGCKNSAETIPVL 1052
>gi|17533985|ref|NP_496515.1| Protein DNA-2, isoform a [Caenorhabditis elegans]
gi|3877086|emb|CAA90399.1| Protein DNA-2, isoform a [Caenorhabditis elegans]
Length = 1105
Score = 338 bits (868), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 289/991 (29%), Positives = 470/991 (47%), Gaps = 120/991 (12%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD--VGRENNFLIVHPDVLVSGT 456
++ G R V+L + W I G T+N+IG G D V + +I++PD LV T
Sbjct: 159 DKEGTTRIVYLQDHWSEMSIEAGSTINLIGA-QAWGDRDFLVNDDVGIVILNPDALVPCT 217
Query: 457 RVAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARL 513
VA++ C R++VL+++ K S A LLGT++H+IFQ + K+ P M+ L +
Sbjct: 218 AVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRPVMENDLMKIWNK 277
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI--------ILFKDSQDLNTPTVDFGS 565
K E L A + + L + WI F + L +
Sbjct: 278 QAPKYAEELVALSFTPSCLDAELQPYFSIICGWINKHYPLSNSFFSKREPLPS------- 330
Query: 566 DGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPN 625
K ++ EV DIEE W K GLKG ID ++R K G + LE KTGK
Sbjct: 331 ----KSELLEVYDIEENIWDSKLGLKGKIDVTMRTKSR-------GGMESLELKTGK--- 376
Query: 626 GQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
S EH QV+LY ++ S RY + I G + YL+ + V + +DL+G++ +RN+ +
Sbjct: 377 SSCSSEHTGQVLLYCMMQSSRYEQPIGPGNILYLKDGASHCVTPRAADLLGVLQQRNKLS 436
Query: 686 NDIIKASTTQQLP---------------PMLRAYGGNKEC-----SGLGNMFDSHIYHLT 725
+ TT LP M Y +E + N ++ + HL
Sbjct: 437 VHF-EDPTTSNLPDPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMKNFAENEMAHLE 495
Query: 726 TAHCSFLRHWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
H + +W R I E K M ++W CLS + S E
Sbjct: 496 QNHIEYAANWIRWISAEWKCERERMTSQNKDLWLKSVQERVEEGTCLSDL-HPVSEEMSN 554
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAV 841
S + + F R+ + S N T R GD +LS + +A+
Sbjct: 555 S---QKIIISFSRKFLKSSNTP-------------------TFRPGDVCLLSNKK-HIAI 591
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
LI E+S V S + R + + +DK M++ S NLV
Sbjct: 592 GFALIDEVSDDQQIVKISTDKTIKSRYEAP---------FHLDKYTSMSTHSTTLGNLVY 642
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L +LR ++VDL P + F+ PA+ I + LN++QR+A++ L +D
Sbjct: 643 LLQNDEIGKRLRNILVDLLPPIIMDATGFNLTPAIKKIIIKAKLNNEQRKAVVHALATED 702
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ--SIDFVRIG 1019
+ ++ G+PG+GKT+ + ++ L+ +LL ++T+SAVDN+L KL + + +R+G
Sbjct: 703 FMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILTKLTKEVAAEKILRLG 762
Query: 1020 RHEVVHKEIQKHCLSAMNINSVEE-----IKKRLDQVKVVAVTCLGITNPLL-TDKKFDV 1073
+ +I+K L A N E ++K + +VA TC + LL + + FDV
Sbjct: 763 SSSSIKDDIKKMTLKAKLENETSEEYYAAVRKVMKTTPIVACTCHHVPRELLFSYRHFDV 822
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
I+DEA P+ L L ++KFVLVGD QL PLV S +A++ G IS +L + HP
Sbjct: 823 VIVDEASMVLEPLLLPVLATSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQSHP 882
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK-----VSDLSSCSPWLKE 1188
+ +L SQYRM + I LS+ L Y +RL CG++ ++ + + + + S +++
Sbjct: 883 GVVVSLTSQYRMNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRK 942
Query: 1189 AL-----NPCRPVIFVNTD--MLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGK 1239
AL + C +F++T + + +D + + N EA LI+++ Q+ V + ++
Sbjct: 943 ALSGDIKDSC---VFLDTQSTINSKMQCEDGEGGGMCNDGEAKLISELCQQFVMSGVKPH 999
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+IG+++ Y Q + IR L+ +E++TID YQGR+K I+ S ++ + + S LL
Sbjct: 1000 EIGVMSAYRRQVDHIRGILNSDELEVNTIDSYQGREKRVIIWSLTWTNNSTKK--SELLK 1057
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
D R+NVALTRA++KL++VG + +P+L
Sbjct: 1058 DERRVNVALTRARQKLVVVGCKNSAETIPVL 1088
>gi|195030502|ref|XP_001988107.1| GH10987 [Drosophila grimshawi]
gi|193904107|gb|EDW02974.1| GH10987 [Drosophila grimshawi]
Length = 1110
Score = 338 bits (867), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 283/1027 (27%), Positives = 483/1027 (47%), Gaps = 158/1027 (15%)
Query: 408 HLWEDWFHTVIAPGDTVNVIGEFDDQ-GKCDVGRENNFLIVHPDVLVSGTRVAASFSCPR 466
HL W T I GD +++ + + +E+ + ++HPD+L+S T V S C R
Sbjct: 107 HLQAPWNQTPIQTGDLLSLQAHWQPTLAAYAINKEHGYCVIHPDLLISSTSVTGSLFCRR 166
Query: 467 RSVLDERLKCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN--IESLY 523
++VL +R + + + + ++ GTL+H++ Q L + + +E+ + +L + LY
Sbjct: 167 KAVLQDRFRGVDSANAVMIIGTLVHELLQTVLAQRLRRKPQIEDALQGMLHSAQLAQQLY 226
Query: 524 ACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMA 583
A ++ +I L + + ++ +I + + + +P V + I ++ DIEE
Sbjct: 227 AAQLSRAEIELQLHKFVEPIVAFIAQYLEGE---SPAVQLPETFAGR--IEQIQDIEENL 281
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W P+ GLKG +D S+RV+ +K++ I PLE KTG+ SMEH+ Q++LY L+
Sbjct: 282 WVPQMGLKGKVDVSVRVR--NKKHPI-----PLELKTGR---ASFSMEHKGQLLLYQLMH 331
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK----ASTTQQ--- 696
S + SGLL YL+ + V R++ LI+ RNE A+ + + +T Q+
Sbjct: 332 SA-LGQETRSGLLLYLREGIMREVREGRNEQRDLILLRNELAHYLTRDAQLPATGQESVS 390
Query: 697 ---------------LPPMLRAYGGNKECS---------------------GLGNMFDSH 720
LP + + C+ L +
Sbjct: 391 LSLPEQPGKLLQPFELPEPISHHSACGNCAYATLCCSFASTDPQLELSESHPLRRLMPQV 450
Query: 721 IYHLTTAHCSFLRHWDRLIDLEAKEMQVVKN--EIWCSRGSGGNHFTGCLSSIVLDASNE 778
+ HL ++ HW L+ LE ++ + +W + + + L
Sbjct: 451 LSHLGQPDNEYVLHWCGLLALEEQQARQSHQLRSLWTETPARRQQQGRAIHQLELPTG-- 508
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRS---GDYVILSTE 835
H+ ++D RF + L+ +A KD + L G+YV +S
Sbjct: 509 HKARFQDGRFEH------------------KLVLSAQADKDFNLNLSGFELGEYVTVSCT 550
Query: 836 SDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVM 895
S RLA+A+G IT + + V + L G+ + E + +DK E + S
Sbjct: 551 S-RLAIAAGYITRLETRSLCVQLERDL---GQRYTD-------ESFIVDKHESQSFASFN 599
Query: 896 RYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS------LNDDQ 949
NL L S +S++LR ++V P+ Q + I K LN Q
Sbjct: 600 YTNLALLLEASEKSAELRSIVVARTPPK--------QHKVVPRIIGSKGGPMLRPLNKVQ 651
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLK 1009
+ A ++ LT + LI G+PGTGKT T+V V+ L + S+L+T+ T+SAVDNLL++L
Sbjct: 652 QLAALRALTTSTHLLIKGLPGTGKTQTLVAIVRLLHLMERSVLITAQTHSAVDNLLLRLL 711
Query: 1010 SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGITNPLLT 1067
++ +R+G +H ++ + + N +V+++ + L + +V VTCLG + L
Sbjct: 712 PHNLPMLRLGNSARIHPQLLAISEAELTSNCETVDQLTQVLHKPSIVGVTCLGAGHALFQ 771
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FD CI+DEA Q P L L ++F+LVGD QLPPLV+S EAR+ G + +LF+R
Sbjct: 772 QRHFDYCIVDEATQVLQPTVLRALSHCTRFILVGDPEQLPPLVRSREARQRGADETLFQR 831
Query: 1128 LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS-SCSPWL 1186
L E +A + L QYRM + I L+N L YG L C S ++ NA++++ +S S S W+
Sbjct: 832 LDCE--EATAVLTLQYRMNRSITRLANELTYGQALQCASKQVENARLQLELISNSNSAWV 889
Query: 1187 KEALNPC--RPVIFVNT---------------------DMLPAYEAKDH----------- 1212
+ AL + V+ ++T D + + +D
Sbjct: 890 QRALQTHLEQAVLLLDTSDCSQRCLDYAAASKQLGQTGDSIEQHYGEDRIVPTTARSRRP 949
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTIDKY 1271
N EA ++ + +L+ + + IG+I PY +Q L+R ++ VE +T+D+Y
Sbjct: 950 PKYTNYCEAAIVMHLLHQLLAAGYDARRIGVIAPYRAQVELLRQLGKDLNGVEFNTVDQY 1009
Query: 1272 QGRDKDCILVSFVRSSENP----RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK- 1326
QGRDK+ I+ S ++ + R+ + +L D R+ VA+TRAK KLI++G L +
Sbjct: 1010 QGRDKNLIIYSCTKTGSSTDSAERSREAEILEDQRRLTVAITRAKHKLILLGDVSCLQRY 1069
Query: 1327 VPLLKLL 1333
P +L
Sbjct: 1070 TPFQRLF 1076
>gi|158284524|ref|XP_307265.4| AGAP004685-PA [Anopheles gambiae str. PEST]
gi|157021005|gb|EAA03204.4| AGAP004685-PA [Anopheles gambiae str. PEST]
Length = 1130
Score = 336 bits (862), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 299/1018 (29%), Positives = 474/1018 (46%), Gaps = 164/1018 (16%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGTLLHQIFQAG 496
V + F + PD LVSGT V S C RR VL E + SE + ++GT++H IFQ
Sbjct: 142 VNADFGFFVTDPDRLVSGTTVVGSLFCHRRGVLQELFRMSESENTQMVIGTVVHYIFQRC 201
Query: 497 LM-KEIPTMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDS 553
L+ K + +E A+ V++ K I SLY ++ + L + ++ ++ +
Sbjct: 202 LLDKSCKLLTHVETIAKKVMKTKKVISSLYEVNLSTKEAFSLLGPYLKEIETFLNKHFNH 261
Query: 554 QDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMI 613
+ + T T + + I EV DIEE W G+KG IDA++ V ++ + I
Sbjct: 262 RSIQTDT--------ETIAICEVNDIEENIWCHHLGVKGRIDATVSVSSDATKKTFE--I 311
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKH-IDSGLLYYLQSDQTQGVMVQRS 672
+PLE KTG+ S EH Q+ LY ++M+ + H +++GLL YL+ + V R+
Sbjct: 312 MPLELKTGR---ASYSFEHLGQLALYQMMMN--LVGHEVNAGLLLYLKEGKCSRVTANRN 366
Query: 673 DLVGLIMRRNEFANDI----IKASTTQQ-----LPPMLRAYGGNKECS------------ 711
LI+ RNE A + +K + TQ+ P + + C+
Sbjct: 367 MKRDLIILRNEVARSLSKWMVKDNITQKGSLAMKPTLPDPINNERACTKCPYNTVCITLL 426
Query: 712 -----------GLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQV----VKNEIWCS 756
GL + + HL T + W LI LE + V V+N +W S
Sbjct: 427 KSEREGTVTNYGLSILAEEACGHLRTKDVDYFIQWSGLIYLETHDETVQSRNVQN-MWNS 485
Query: 757 RGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
C+ ++L + D+ + + F L A+ + +P
Sbjct: 486 SPKERAETGRCIYGLILVSPVR----IVDDLYFHTF--------KLEAA------SSTLP 527
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
K +D T + G+Y+I ST S R+AVASG I + + VSF + L +++ A++
Sbjct: 528 -KALD-TFQVGEYIICST-SKRIAVASGYIISHASNEIVVSFERDL-----STNYGAETF 579
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVF-SQDPA 935
+ +D++ + S + NL L + SQ RR+I+D E P F G + S P
Sbjct: 580 I-----LDQNTLYKS-TFNLSNLALLLFNDDRCSQYRRIIIDREKPTFSDGFLSKSMIPK 633
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
I K LN Q+ A +K K Y L+ G+PGTGKT T+V ++ L + G SILLTS
Sbjct: 634 AKEIL--KKLNRHQKNAALKAAATKSYCLLKGLPGTGKTQTIVGLIRLLSLLGQSILLTS 691
Query: 996 YTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEI--QKHCLSAMNINSVEEIKKRLDQVK 1052
T+SAVDN+L +L Q + F+R+G + + + + + +S E++ + +Q K
Sbjct: 692 STHSAVDNVLKRLLPFQDLKFIRLGSIDRIDPAVASSAEAIVTEHCDSPEKLSEVYEQYK 751
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
+V VTC G +PL+ + FD CI+DEA Q P + PL+ + +F+LVGD QLPP+++S
Sbjct: 752 IVGVTCQGTGHPLINKRLFDFCIVDEATQVFQPSLIRPLLRSKRFLLVGDPEQLPPVIKS 811
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EAR G S+F RL +E I L +QYRM + + +L+N Y +L CG+D + N
Sbjct: 812 VEARSLGACESMFHRLDQEGSFYI--LPTQYRMNRVLTKLANEFAYNGKLICGNDIVENN 869
Query: 1173 KIKVSDLSS------CSPWLKEALNPCRPVIFVNTDMLPAY------------------- 1207
I + +L + WL + ++ + V D Y
Sbjct: 870 TINLPNLENIRRIYEVERWLLKMISNQIDLSVVLVDTGNTYQMNLNYRKLNEISTSITDD 929
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI------------- 1254
++K+ N E ++ ++ ++ +E + IGII P+ +Q LI
Sbjct: 930 QSKNAMNCTNVSEIAIVVYVSWAFLQAGVEPESIGIIAPFRAQVELIRKLMKKLFEKQKY 989
Query: 1255 -RHSLS-----------------VSSVEIHTIDKYQGRDKDCILVSFVRSSE-------N 1289
RHS S ++E++TID++QG+DK IL S +SS N
Sbjct: 990 TRHSSSSNHNVIYTKENVEQLNHTCNIEVNTIDQFQGKDKKIILFSCTKSSNLSDDIWIN 1049
Query: 1290 PRNCTSS----LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
SS +L D R+ VA+TRAK+KLI++G TL K L N + S I
Sbjct: 1050 KGKERSSHGYEILSDKSRLTVAITRAKEKLIIIGDRLTLDSYAPFKKLFNVASKISNI 1107
>gi|308510272|ref|XP_003117319.1| CRE-DNA-2 protein [Caenorhabditis remanei]
gi|308242233|gb|EFO86185.1| CRE-DNA-2 protein [Caenorhabditis remanei]
Length = 1084
Score = 332 bits (852), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 291/995 (29%), Positives = 479/995 (48%), Gaps = 118/995 (11%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD--VGRENNFLIVHPDVLVSGT 456
+++G+ R V+L + W I G+T+N+IG + G D +I++P+ LV T
Sbjct: 130 DKNGKTRLVYLQDRWSELDIEVGNTINLIGP-EKWGDDDYIANDTKGIVILNPNALVPCT 188
Query: 457 RVAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMK-FLEEYARL 513
VA+S C R+ +L+++ K S A LLGT++H+IFQ + K+ P ++ L +
Sbjct: 189 AVASSLFCSRKVILNDKFKFGNASNKAMLLGTIIHEIFQTAITSKKRPLVEDNLLQIWNT 248
Query: 514 VLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVDFGSDGLKKLK 572
K E L A + ++ L + +WI + S T S K +
Sbjct: 249 QAPKYAEELVALSFTPSCLNVELKPYFSVICDWINKHYPLSNSFFTKREQLPS----KSE 304
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
+ EV DIEE W K GLKG +D ++R K SK+ GM LE KTGK SS EH
Sbjct: 305 LLEVYDIEENIWDSKLGLKGKVDVTMRTK--SKK----GM-ESLELKTGK---SNSSSEH 354
Query: 633 RAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAS 692
QV+LY L+ S RY + I G + YL+ ++ V + ++L G++ +RN + +
Sbjct: 355 SGQVLLYCLMQSSRYEQPIGFGNILYLKDGISRCVTPRAAELSGILQQRNMLSV-FFEDP 413
Query: 693 TTQQLPP---------------MLRAYGGNKECSG-----LGNMFDSHIYHLTTAHCSFL 732
T +LPP M Y +E G L ++ + HL H ++
Sbjct: 414 TMSRLPPPRLESRFCDKCDHKVMCSFYQRAEENYGKSSKALKEFAENEMAHLDHTHIDYV 473
Query: 733 RHWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRF 788
W R I E K MQ ++W C+ + S E S R
Sbjct: 474 SKWIRWISAEWKCERERMQTQNKDLWLKTIPERVEEGACMQELT-PISEEMSNS---QRI 529
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITE 848
+ F R+ +P+ R GD +LS + + +A+A +I
Sbjct: 530 IISFSRKSSSNPS---------------------PFRPGDVCLLSNKKN-VAIAFTVIDY 567
Query: 849 ISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQ 908
+S + VS K ++ S + +DK M++ S NL+
Sbjct: 568 VSDDVIKVSSDKIVK-----------SRYEAPFHLDKYTSMSTHSTTLGNLIYFLQNDEI 616
Query: 909 SSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGM 968
++LR ++VDL P SVF+ PA+ I + LN++QRRAII L+ +DY ++ G+
Sbjct: 617 GNRLRNVLVDLLPPSIVDTSVFNITPAVKKIIVKAKLNNEQRRAIILALSTEDYMIVEGL 676
Query: 969 PGTGKT--------------STMVHA-VKALLMRGASILLTSYTNSAVDNLLIKL-KSQS 1012
PG+G+T +T++ ++ LL +LLT++T+SAVDN+L KL K S
Sbjct: 677 PGSGETIQILTGRNDFISGKTTLISVLIQCLLATNKKVLLTAFTHSAVDNILGKLTKEVS 736
Query: 1013 IDFV-RIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
+ + R+G +++EI+K L A + N +++ + VVA TC + LL
Sbjct: 737 PEIILRLGSSSTINEEIRKMTLKAKLESESSDNYYASVRRVMKTSPVVACTCHHVPRELL 796
Query: 1067 -TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ + FDV I+DEA P+ L L + KFVLVGD QL PLV S +A++ G E+S
Sbjct: 797 FSYRHFDVVIVDEASMVLEPLLLPVLATSKKFVLVGDCKQLTPLVVSRKAKQEGAEVSTM 856
Query: 1126 RRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
+L + H + +L SQYRM + I LS+ L Y +RL CG++ ++ + + + S
Sbjct: 857 EKLQKAHSNVVVSLTSQYRMNREISMLSSKLFYENRLLCGNEAVSRSSLDRTGDYSVPEG 916
Query: 1186 LKEALNPC------RPVIFVNTDMLPAYEAK----DHQTLNNPVEACLIAKITQELVKNE 1235
L E + +F++T + + D ++N EA +I+ + + +++
Sbjct: 917 LDEHIRKTLSGDISDSCVFLDTQSSLNHSMQCNDEDGGGMSNDGEAKIISGLCKRFIQSG 976
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
++ +IG+++ Y Q + I+ + S+E++TID YQGR+K I+ S + + + S
Sbjct: 977 VKSSEIGVMSAYRKQVDHIKTVVQNDSLEVNTIDSYQGREKRVIIWSLTWTDNSSKK--S 1034
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
LL D RINVALTRA++K+++VG ++ +P+L
Sbjct: 1035 ELLRDERRINVALTRARQKIVVVGCKKSAESIPVL 1069
>gi|328720402|ref|XP_003247019.1| PREDICTED: DNA2-like helicase-like isoform 2 [Acyrthosiphon pisum]
Length = 945
Score = 329 bits (844), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 263/833 (31%), Positives = 401/833 (48%), Gaps = 126/833 (15%)
Query: 394 LRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE-FDDQGKCDVGRENNFLIVHPDVL 452
L L + +S EE HL W H++ GD V V+ + DD V ++ F+ H D L
Sbjct: 180 LTLSSCKSYEEDVCHLSGIWLHSLFEVGDIVFVMAKKVDDYWS--VNSDHGFVTRHSDFL 237
Query: 453 VSGTRVAASFSCPRRSVLDE---RLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
VSGT + S C RRSVL + L CS S ++GTLLHQ+ Q L ++ +F ++
Sbjct: 238 VSGTTIVGSLFCSRRSVLADIYKGLDCS--SAVMVIGTLLHQLLQTVLKRK----QFNQK 291
Query: 510 YARLVLQKNIES------LYACGVNENDIHKTLVEAIPKMLNWIILFK-DSQDLNTPTVD 562
+ V+ + I S LY +N K L++ IPK+ N++ + D+Q
Sbjct: 292 DIKAVVDEMINSPGFVHTLYESDMNFETTKKELMDFIPKIQNFVRTYLLDNQ-------- 343
Query: 563 FGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTG 621
G D + KI + DIE+ W P +G+KG +D ++ + K +P+E KTG
Sbjct: 344 IGKDKRTWQGKIVSIEDIEDNLWVPVFGVKGKVDITVLANYDGKSK-----TMPIELKTG 398
Query: 622 KIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRR 681
+ S EHR QVILYT++M E + +DSGLL YL+ + V V + LIM R
Sbjct: 399 R---ASGSEEHRGQVILYTIMMKELGMD-VDSGLLLYLRENVLTQVKVGHREKRDLIMLR 454
Query: 682 NEF-----ANDIIKASTTQQLPPMLRAYGGNKECSGLGNM--------------FDSH-- 720
N AN I+ +P + + CS + D H
Sbjct: 455 NRLVHYLNANKIVSDPIDDYIPILPEPINHHSACSKCPYLTACSAVLSKEGFEKLDHHNP 514
Query: 721 --------IYHLTTAHCSFLRHWDRLIDLE------AKEMQVVKNEIWC----SRGSGGN 762
I HL + H +++ W + LE + +++W R GN
Sbjct: 515 LKSLGPQAISHLKSEHINYVMQWTAFLQLENSIENTKDNLSAKASDLWTLSYFEREKRGN 574
Query: 763 HFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDC 822
C+S + + + Q NR+ + + + S + ++
Sbjct: 575 ----CISLLKIKNVVKEQ----GNRYYLNTMEKSKKSDKIKHTN---------------- 610
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
+YV++ST + R AVA+G I+ ++ ++V + L G +
Sbjct: 611 -FSLNNYVVVST-NHRNAVATGFISALTETSINVLLDRDLSKLGPTE-----------FH 657
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL-SYIWS 941
+DK E + + +L L S S++LRR I+D E P F S D L S+I S
Sbjct: 658 VDKYESQSMVAFNFSSLALLLEPSENSAKLRRFIIDKEMPSF-----LSSDNHLDSFIKS 712
Query: 942 EK---SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+LN QR AIIK L A +YALI GMPGTGKTST+ ++ L++ G S+L+TS+T+
Sbjct: 713 SGLTLNLNSSQRSAIIKTLAADNYALIKGMPGTGKTSTVAALIRLLVLMGRSVLVTSHTH 772
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC--LSAMNINSVEEIKKRLDQVKVVAV 1056
SAVDNLL+ L IDF+R+G VH ++ + C + + + ++ E++ K +Q +V V
Sbjct: 773 SAVDNLLLLLHKNKIDFLRLGSKARVHPDLWEKCDEVVSQSCDTPEKLSKLYNQANIVGV 832
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
TCLG + LL + FDVCI+DEA Q + L + FVLVGD QLPPL+++ +A+
Sbjct: 833 TCLGCGHALLQKRTFDVCIVDEATQVVQSSVIAALHSSKVFVLVGDPQQLPPLIKNQKAK 892
Query: 1117 ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
E GM++S+F RL + P + L QYRM I EL+N Y L C +D +
Sbjct: 893 ELGMDVSMFDRL--DRPSVTAVLHVQYRMNGPIAELANKYTYNGSLQCANDSV 943
>gi|242018331|ref|XP_002429631.1| DNA replication helicase DNA2, putative [Pediculus humanus corporis]
gi|212514610|gb|EEB16893.1| DNA replication helicase DNA2, putative [Pediculus humanus corporis]
Length = 1157
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 278/1013 (27%), Positives = 486/1013 (47%), Gaps = 163/1013 (16%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNF 444
V A +VL + + +SG++ L + W ++++ D V + + D G V + +
Sbjct: 214 VTAGRCEQVLEVEDVKSGQKGICRLRDVWTFSLVSLHDVVVIQAKLSDDGWI-VNNKTGY 272
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE--RSISALLGTLLHQIFQAGLMKEIP 502
+I++ D VS T + ++ C R+ + + K E + L+G ++H+ FQ L
Sbjct: 273 IILNSDNFVSSTSLVSAMFCMRQGLFNYFYKGMEPGSNQKMLIGRMIHEFFQKCLKTRSC 332
Query: 503 TMKFLEEYARLVLQKN--IESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
T + ++E L + + Y G+ +I + + P + +++ ++ + P
Sbjct: 333 TDENVKEMVSDFLGSHDYLLDFYFSGMKSEEIEREIESFAPSVRDFLDVYMKGK--RKPV 390
Query: 561 VDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKT 620
+ G I E+ DIEE+ +P GL+G ID ++++K ++K + PLE KT
Sbjct: 391 GKNFAGG-----IEEILDIEELIKSPNLGLQGRIDVTVKIKSKNKER-----VAPLELKT 440
Query: 621 GKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMR 680
GK S H++Q+ILY LLM+E + ++SGLL YL+ + ++ R D + ++
Sbjct: 441 GK---ASFSNAHKSQLILYVLLMNEMG-RDVESGLLLYLKEGIMEEIVPSR-DEIRNLLL 495
Query: 681 RNEFANDIIKASTTQQLPPMLRAYGGNKECSGL---------GNMFDSH-IYHLTT---- 726
K +LP +R +C L N +++H + L T
Sbjct: 496 LRNRLIGYYKTLKNHELPEPVRNISSCNKCPYLRVCTSYLKSENYYETHPLRGLDTPDIK 555
Query: 727 -AHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRD 785
+H ++ W++++ W L+ +E QK +
Sbjct: 556 PSHLNYFNEWNKML--------------W------------------LEFGDESQKDAEN 583
Query: 786 NRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYV-----ILSTES---- 836
NL + ++G C G + IL+TE+
Sbjct: 584 AELT-----------NLKLNSQVEILGEGFK-----CVFVGGSAIEKFEKILATETFVHV 627
Query: 837 ---DRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
V +G I + + ++++ K L+ SS+ V+++ TSF
Sbjct: 628 INDKNERVGAGRIADFTSTTITLTIDKKLK-----ESSN-------VYKV------TSF- 668
Query: 894 VMRYNLVQLFLQS------AQSSQLRRMIVDLEAPRFD---SGSVFSQDPALSYIWSEKS 944
++N + L L + + LR +++D +AP+F+ + F +D + K
Sbjct: 669 --KFNFLNLHLSNLGRLLNEEHENLREIVIDKKAPKFEEKFNKKTF-KDNCFKIL---KK 722
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN +Q++A++K + +Y LI G PGTGKT T VK L G ++L+ +T+S+VDN+
Sbjct: 723 LNKEQQKAVVKSILCNEYLLIKGPPGTGKTETTASLVKVFLALGKTVLIAGHTHSSVDNI 782
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTCLGIT 1062
L++L ++++R+G + + K + S + N S E+++K D+ KV+A TCLG+
Sbjct: 783 LLRL--SDVEYLRLGPLKSIKKILHDKSFSKLIENCGSAEDVRKLYDR-KVIASTCLGLD 839
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ + KKFDVCI+DE+ Q L PL + KF+LVGD QLPP+V++ EA+E+GM
Sbjct: 840 SDFIAKKKFDVCIVDESSQVLQSEILRPLFCSDKFILVGDEDQLPPIVRNLEAKESGMSE 899
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS- 1181
SLF RLS E+ + L+ QYRM I L+N L YG L C D++ANA + + + S
Sbjct: 900 SLFDRLSNEN--TVVKLKYQYRMNSCINSLANYLAYGGLLECADDKVANATLNIRNEESY 957
Query: 1182 --CSPWLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
W+++ +P + V+FVNT + K + N + L + I ++L+K+ +E
Sbjct: 958 DKLQEWIRDVFSPNLDKSVVFVNTSNYFS-RGKTLENKKNERSSALESNIIKKLIKSSLE 1016
Query: 1238 ----GKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
D+G+I P+ Q L++ L ++++VE++T+D+YQGRDK+ I F EN
Sbjct: 1017 FGTSETDVGVIAPFADQIALLKKKLRGSNLNNVELNTVDQYQGRDKEMIF--FSCGKENR 1074
Query: 1291 RN---------CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV-PLLKLL 1333
N S LL D R+ V +TRAK+KL++VG +T+ + P KLL
Sbjct: 1075 WNGSSSSSSEISKSELLNDLKRVTVTVTRAKRKLVVVGDRKTVERYEPFQKLL 1127
>gi|313229643|emb|CBY18458.1| unnamed protein product [Oikopleura dioica]
Length = 1049
Score = 324 bits (830), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 278/969 (28%), Positives = 465/969 (47%), Gaps = 131/969 (13%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSER----SISALLGTLLHQIFQAGLMKE 500
++ H D L+S T VA + CPR +VL +R + +E S+ L+GT+LH++FQ L +
Sbjct: 116 IVAHSDNLISSTNVATAAKCPREAVLGDRFRDAEYGSRGSVRMLIGTILHEVFQELLTES 175
Query: 501 IP----TMKFLEEYARLVLQKNIESLYACG------VNENDIHKTLVEAIPKMLNWIILF 550
I T++ + + V +E + G V E++ + ++ ++ K L
Sbjct: 176 IKGRIITVEKITNEFKKVAANFVEDIMLAGSDVDAVVKESECYFPMISSLLKGLCQTGFD 235
Query: 551 KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEIN 610
Q +T + K+KI V DIEE W P+ G+KG ID I KI++ N N
Sbjct: 236 TKLQFASTSNPNRTDHEDSKIKIEAVPDIEENLWEPRLGIKGKID--ITAKIDA-MNLGN 292
Query: 611 G----MILPLEFKTGKIPNGQSSMEHRAQVILYTLLMS----ERYLKHIDSGLLYYLQSD 662
G ++ P+E K+G+ Q EHR Q LY + + ++Y K +GL+ Y+++
Sbjct: 293 GKRKKLVTPIELKSGR--GDQLIQEHRIQTQLYGAVHAIRGNQQYQK--TTGLVCYIKTG 348
Query: 663 QTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ-----LPPML---------------- 701
+ V V++ ++ ++ RRN A + + + LPP++
Sbjct: 349 KVFSVPVKKIEIDTIMERRNVVAGYLRRPLKEEDEDYRPLPPLIPDGRRCEFCFKRSLCS 408
Query: 702 ---RAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEM--QVVKNEIWCS 756
+ G E + +F+ H++ ++ W RL LE K + ++ EIW +
Sbjct: 409 FWSKVEGLTHEDAKTQEVFEKEQEHVSPELLKYVTKWTRLGLLEQKNINRKLRGKEIWNN 468
Query: 757 RGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
+ D + + + H P P + + +L
Sbjct: 469 K--------------------------EDEKSMLKGLESHGP-PVRSGNRWKTLFKLPF- 500
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEI-------SRFHVSVSFSKPLRLPGRNS 869
TK+ L Y + +RLAVASG +T + SR V +S ++ L P ++
Sbjct: 501 TKNWPFDLGQSVYF---SHGERLAVASGWVTRLNPSKGLKSRGIVELSLNQCLP-PQKDY 556
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPR------ 923
+ + K +F + + S +L++++++ R
Sbjct: 557 QVN----------LGKGAGGGNFDTTLWLGNLMLYASPYGEKLQKILLNPPTFRKSVKQN 606
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
F F++D + LN Q++AI L AK Y+LI G PG+GKTS ++ ++
Sbjct: 607 FPETYDFARDTLKKALTGR--LNVHQKKAIKLALEAKSYSLIQGFPGSGKTSVIIELIRI 664
Query: 984 LLMRGASILLTSYTNSAVDNLLIKL-----KSQSIDFVRIGRHEVVHKEIQKHCLSA--- 1035
LL G +L+TS+T+SAVDN+L +L K Q + +RIG + + +I H +S
Sbjct: 665 LLALGKRVLITSHTHSAVDNILARLLPKMSKQQVRETIRIGADKKI--DITLHHISEETR 722
Query: 1036 -MNINSVEEIKKRLDQVKVVAVTCLGIT-NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
N + E+ + ++ ++VA TC+G++ + + T D I+DEAGQ + P+ LG L+
Sbjct: 723 LANCKTNEDYQNVYEKARLVAGTCMGVSRHAVFTGGPVDYAIVDEAGQVSEPIVLGALVH 782
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
+SKF+LVGD QLPPL+ S A++NG +ISL RLS+ +P ++ LQ QYR I L+
Sbjct: 783 SSKFILVGDPCQLPPLIHSRSAKQNGAQISLMERLSKSYPDSLRQLQIQYRFNNDITALA 842
Query: 1154 NALIYGDRLSCG---SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
N LIY ++ G D+ + K S WL +A++P + + F++T E K
Sbjct: 843 NHLIYEGKMISGEKNGDQTLLSVHKEWKFSESQVWLNDAIDPSKTITFIDTSAKLGLENK 902
Query: 1211 -DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTI 1268
+ + NP E ++ + + L +++ IGII PY +Q L+R L S VEI T+
Sbjct: 903 IEGRGYTNPTEVDIVKYLVKRLNVMKVKKDCIGIIAPYRAQIELLREKLESEEGVEIDTV 962
Query: 1269 DKYQGRDKDCILVSFVRS--SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
DK+QGR+ I++SFVRS + S LL +RINVA TRA+ KLI VG +T+ K
Sbjct: 963 DKFQGRENKIIIISFVRSIPDLDVDKVNSELLESVNRINVACTRAQYKLIFVGCKKTIQK 1022
Query: 1327 VPLLKLLIN 1335
+ + L++
Sbjct: 1023 IDITNKLVS 1031
>gi|341895577|gb|EGT51512.1| hypothetical protein CAEBREN_07745 [Caenorhabditis brenneri]
Length = 1069
Score = 323 bits (827), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 280/979 (28%), Positives = 473/979 (48%), Gaps = 101/979 (10%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKCDVGRENNFLIVHPDVLVSGTR 457
++ G+ R V+L + W I PG+T+N+IG E V + +I++P+ LV T
Sbjct: 130 DKDGKTRMVYLQDRWADLNIEPGNTINLIGAEVWGNDDYIVSDKQGIVILNPNALVPCTA 189
Query: 458 VAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARLV 514
+A+S C R++VL+++ K S A LLGT++H+IFQ + K+ P ++ L +
Sbjct: 190 IASSMFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRPLVENDLLKIWTTQ 249
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVDFGSDGLKKLKI 573
K E L A N I L + WI + S T S K ++
Sbjct: 250 APKYAEELVALSFTPNCIDAELKPYFSIICQWINKHYPISNSFFTKREPLPS----KSEL 305
Query: 574 SEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHR 633
EV DIEE W K GLKG ID ++R K + GM LE KTGK +S EH
Sbjct: 306 LEVYDIEENIWDYKLGLKGKIDVTMRTKPQ------KGM-ESLELKTGK---SNASSEHS 355
Query: 634 AQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAST 693
AQV+LY ++ S RY + I G + YL+ ++ V + +L+G++ +RN ++ + T
Sbjct: 356 AQVLLYCMMQSSRYEQPIGLGNILYLKDGVSRCVTPRVFELIGILQQRNSLSSHF-EDPT 414
Query: 694 TQQLPP---------------MLRAYGGNKECSG-----LGNMFDSHIYHLTTAHCSFLR 733
++ LPP M Y +E L N ++ + HL ++H ++
Sbjct: 415 SENLPPPRKDIRFCDKCDQKVMCAFYQKTEEKYSKSNEMLRNFSENEMAHLESSHLDYVS 474
Query: 734 HWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV 789
W R I E K ++ ++W C+ +
Sbjct: 475 KWIRWISAEWKCERDRVETSSRDLWLKSVPERVENGFCMPDL------------------ 516
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
P A+ +I ++ R G+ +LS S +A+A ++ +
Sbjct: 517 -------YPVSEEKANSQRIIITLNQKSEVKVSPFRQGEVCLLSN-SKNVAIAFVVVDHV 568
Query: 850 SRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQS 909
S + VS K ++ + D+ H +DK M++ + NLV
Sbjct: 569 SDDLIKVSSDKAVK-------AHYDAPFH----LDKYVSMSTHATTLGNLVYFSQNDEIG 617
Query: 910 SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMP 969
+LR ++VDL P + ++ I + LN++QRRA++ L+ +DY ++ G+P
Sbjct: 618 KRLRSVLVDLLPPTVPEITGMDITSSIKKIIIKAKLNNEQRRAVLCALSTEDYVIVEGLP 677
Query: 970 GTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL-KSQSID-FVRIGRHEVVHKE 1027
G+GKT+ + ++ L+ +LL ++T+SAVDN+L KL K S D +R+G + +
Sbjct: 678 GSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILGKLIKDVSSDKILRLGSSSTIKDD 737
Query: 1028 IQKHCL-----SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL-TDKKFDVCIMDEAGQ 1081
I+K L S + + +K+ + +VA TC + LL + + FD I+DEA
Sbjct: 738 IRKMTLKEKLESESSQDYYAAVKRVMKTTPIVACTCHHVPRELLFSYRHFDAVIVDEASM 797
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
P+ L L + KFVLVGD QL PLV S A++ G +S +L + HP+ + +L S
Sbjct: 798 VLEPLLLPVLATSKKFVLVGDCKQLTPLVVSRRAKQEGASVSTMEKLQQHHPKVVVSLTS 857
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKI-KVSDLS---SCSPWLKEAL--NPCRP 1195
QYRM + I LS+ L Y +RL CG++ I+ + + + D + ++++AL N
Sbjct: 858 QYRMNKEISMLSSKLFYDNRLICGNEAISRSSLDRTGDYNIPEGLDDYIRKALSGNIADS 917
Query: 1196 VIFVNT--DMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
IF+NT + + KD + + N EA ++A++ Q +++ ++ +IG+++ Y Q
Sbjct: 918 CIFLNTQSETNSLMQCKDEEGGGMINDGEARIVAELCQRFIESGVKPHEIGVMSAYRRQV 977
Query: 1252 NLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
+ ++ + +E++TID YQGR+K I+ S + + + S LL D RINVALTRA
Sbjct: 978 DQLKSFIKNDLLEVNTIDSYQGREKRVIVWSLTYTETSTKK--SELLRDERRINVALTRA 1035
Query: 1312 KKKLIMVGSCRTLSKVPLL 1330
++KL++VG ++ +P+L
Sbjct: 1036 RQKLVVVGCKKSAESIPVL 1054
>gi|268532354|ref|XP_002631305.1| C. briggsae CBR-DNA-2 protein [Caenorhabditis briggsae]
Length = 1071
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 286/986 (29%), Positives = 474/986 (48%), Gaps = 126/986 (12%)
Query: 405 RAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD--VGRENNFLIVHPDVLVSGTRVAASF 462
R ++L + W + G+ +N+I G D V + +I++P+ LVS T VA++
Sbjct: 137 RVIYLQDQWAELDVEVGNAINLIAP-QVWGNDDYIVNNQKGIVILNPNALVSCTAVASAT 195
Query: 463 SCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARLVLQKNI 519
C R+++L+E+ K S A LLG ++H+IFQ + K+ P + L + K
Sbjct: 196 FCARKTILNEKFKFGNASNKAMLLGNIVHEIFQTAITNKKRPLVDSDLLKIWTTQAPKYA 255
Query: 520 ESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGL--------KKL 571
E L A + L + NWI + + PT S GL K
Sbjct: 256 EDLVALSFTPTCLDAELQPYFSVICNWI-------NKHYPT----STGLFTKREPLPSKS 304
Query: 572 KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSME 631
++ EV DIEE W K GLKG +D ++R K SK+ GM LE KTGK + QSS E
Sbjct: 305 QLLEVHDIEENIWDSKLGLKGKVDVTMRTK--SKK----GM-ESLELKTGK--SSQSS-E 354
Query: 632 HRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKA 691
H QV+LY ++ S RY + I G + YL+ ++ V + +L G++ +RN + +
Sbjct: 355 HAGQVLLYCMMQSSRYEQPIGPGNILYLKDGISRCVNPRAPELSGILQQRNMLSVSF-ED 413
Query: 692 STTQQLPP---------------MLRAYGGNKE-----CSGLGNMFDSHIYHLTTAHCSF 731
TT +LP M Y N+E L + + + HL +H +
Sbjct: 414 PTTNKLPAPRQDSRFCGKCDHKVMCSFYQKNEEKFVKSNDSLKDFAEREMAHLEQSHMDY 473
Query: 732 LRHWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLS---SIVLDASNEHQKSYR 784
+W R I E K +QV ++W C+S SI + SN
Sbjct: 474 ASNWIRWISAEWKCERERVQVQNKDLWLKSIEERVEEKTCISDLHSISEEISNSQ----- 528
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
R + F R+ + D R GD +LS + + +A+A
Sbjct: 529 --RVIITFSRKSTVT---------------------DSPFRPGDVCLLSNKKN-VAIAFT 564
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
+I +S + +S K ++ D+ H +DK M++ S NLV
Sbjct: 565 VIDFVSDDVIKISSDKTVK-------CRYDAPFH----LDKYTSMSTHSTTLGNLVYFLQ 613
Query: 905 QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYAL 964
+LR ++VDL P + + A+ I + LN++QRRA++ L +DY +
Sbjct: 614 NDEIGMRLRNVLVDLLPPAIVDINGANISAAVKKIIIKAKLNNEQRRAVVHALATEDYMI 673
Query: 965 ILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID--FVRIGRHE 1022
+ G+PG+GKT+ + ++ L+ +LLT++T+SAVDN+L KL + + +R+G
Sbjct: 674 VEGLPGSGKTTLISVLIQCLVATNKKVLLTAFTHSAVDNILGKLTKEVSNEKILRLGSSS 733
Query: 1023 VVHKEIQKHCLSAMNINSVEE-----IKKRLDQ-VKVVAVTCLGITNPLL-TDKKFDVCI 1075
+ +++ L + E +++ + V +VA TC + LL + + FDV I
Sbjct: 734 TIKDDVRTLTLKSKLEGETSEDYYVAVRRVMKTTVPIVACTCHHVPRELLFSYRHFDVVI 793
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA P+ L L + KFVLVGD QL PLV S +A++ G IS +L + HP A
Sbjct: 794 IDEASMVLEPLLLPVLATSKKFVLVGDCQQLTPLVVSRKAKQEGASISTMEKLQKNHPTA 853
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-----LKEAL 1190
+ +L SQYRM + + LS+ L Y +RL CG++ ++ + + S S P +++AL
Sbjct: 854 VVSLTSQYRMNRELSALSSKLFYENRLICGNEAVSRSSLDRSG-SYAVPIDLDDHIRKAL 912
Query: 1191 --NPCRPVIFVNTDMLPAY----EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ +F++T + E + +NN EA +I+++ Q +++ ++ +IG++
Sbjct: 913 SGDIADSCVFLDTQSPINHSMQCENGESCGMNNDGEAKIISELCQRFIESGVKPNEIGVM 972
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+ Y Q + IR+ + +E++TID YQGR+K I+ S + + + S LL D RI
Sbjct: 973 SAYRKQVDHIRNVVKNEDLEVNTIDSYQGREKRVIIWSLTWTDNSDKK--SELLRDERRI 1030
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLL 1330
NVALTRA++KL++VG ++ +P+L
Sbjct: 1031 NVALTRARQKLVVVGCKKSAESIPVL 1056
>gi|384490075|gb|EIE81297.1| hypothetical protein RO3G_06002 [Rhizopus delemar RA 99-880]
Length = 875
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 221/685 (32%), Positives = 352/685 (51%), Gaps = 89/685 (12%)
Query: 386 DAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFL 445
D + KVL LL E V L ++WF T +A G+ V+ I Q + V ++ +F+
Sbjct: 109 DVELTEKVLTLLQEDENTAMTVRLRDEWFQTTVAVGNVVH-IPLTSHQTEITVDQQEHFI 167
Query: 446 IVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGTLLHQIFQAGLMKEIPTM 504
IVHPD L+S T VA S+ C RRSVL +++ E + S + G +LH++ Q L ++
Sbjct: 168 IVHPDRLISCTAVADSYQCLRRSVLQTKVRGIGETTESLVHGNILHRVLQHALQTGDFSV 227
Query: 505 KFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV--D 562
+ + + R V++ ++E LY +E + L E + + +F S V D
Sbjct: 228 ESIRQAMREVIEASLEELYGIDQDEQTAMEVLGEYADSIHQFGSVFVGSVPKPRARVSSD 287
Query: 563 FGSDGLKKL-----KISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLE 617
G D K + IS V DIEE W+P YGLKGMIDAS+++K+ S N + + +P E
Sbjct: 288 MGPDAAKAMGCDTVAISRVLDIEEHLWSPTYGLKGMIDASVQLKL-SPTNRV--LTVPFE 344
Query: 618 FKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGL 677
KTG+ + +RAQ ILYTLLMS+RY I +G+LYY +++ V RS+LV +
Sbjct: 345 LKTGRTSR---FLSNRAQTILYTLLMSDRYDIDIGAGILYYSKTNSLYLVPAVRSELVSI 401
Query: 678 IMRRNEFANDIIKASTTQQLPPMLRAY--------------------GGNKECSGLGNMF 717
++ RN A+ + +++P M++ + GG + SGL +F
Sbjct: 402 LVARNALASSL---DAQERIPEMIKNFHSCQYCYVTDVCTLYHKSIEGGTEVTSGLYKLF 458
Query: 718 DSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTG-CLSSIVLDAS 776
+ HLT+ SF +HW L+D E ++ ++ IW S+ + +G CLS + L +
Sbjct: 459 EEKTGHLTSKMASFFKHWWELLDKEETDLDYIRKSIW-SQSAEERELSGRCLSDLKLSLA 517
Query: 777 NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTES 836
+ + ++ Y FVR P ++ L GD V++S+
Sbjct: 518 DSSLQP-EIAQWKYCFVRSEADRPLMS-------------------NLSVGDPVVVSSME 557
Query: 837 DRLAVASGLITEISRFHVSVSFSKPLRLP-GRNSSSDADS-------LLHEV-------- 880
+ +A G ++ +S + +S ++PLR P R++ D D + H+V
Sbjct: 558 GHINLAMGHVSRLSSEEILLSLNEPLRHPPTRSADFDLDHNQAFNTLIRHKVDMEPFDKD 617
Query: 881 ----WRIDKDEIMTSFSVMRYNLVQLFLQSAQS--SQLRRMIVDLEAPRFDSGSVFSQDP 934
+RIDKDEI T + +R NLV L + S +LR ++V LE P FD+ S+ Q P
Sbjct: 618 NKVRYRIDKDEIATGMATLRNNLVMLMANTGNSRHQRLRELVVHLERPVFDA-SILPQQP 676
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
LN DQR+ + +VL KDY+LILGMPGTGKT+T +K L+ +IL+
Sbjct: 677 I------HPRLNPDQRKVLTRVLQTKDYSLILGMPGTGKTTTTAEIIKYLVGMNKTILVA 730
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIG 1019
++T++A+DN+L K++ Q +D +R+G
Sbjct: 731 AFTHTALDNVLSKVREQGMDVLRLG 755
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 15/113 (13%)
Query: 1095 SKFVLVGDH--YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
+ VLV D YQLPP+V++ EA E G++ SLF L+E HP+++S L+ QYRM + IM++
Sbjct: 762 ASLVLVSDSDLYQLPPIVRNGEASEKGLDKSLFAILAEAHPESVSRLEYQYRMNKEIMQV 821
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLS-------------SCSPWLKEALNP 1192
+N ++Y +L CGS IA + + L+ + WL++ L+P
Sbjct: 822 ANTMVYDGKLKCGSHLIATRSLSLPRLAAGLRSLHENQPCPTTECWLRQVLDP 874
>gi|158284526|ref|XP_001687806.1| AGAP004685-PB [Anopheles gambiae str. PEST]
gi|157021006|gb|EDO64843.1| AGAP004685-PB [Anopheles gambiae str. PEST]
Length = 951
Score = 306 bits (783), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 280/971 (28%), Positives = 451/971 (46%), Gaps = 163/971 (16%)
Query: 484 LLGTLLHQIFQAGLM-KEIPTMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAI 540
++GT++H IFQ L+ K + +E A+ V++ K I SLY ++ + L +
Sbjct: 10 VIGTVVHYIFQRCLLDKSCKLLTHVETIAKKVMKTKKVISSLYEVNLSTKEAFSLLGPYL 69
Query: 541 PKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRV 600
++ ++ + + + T T + + I EV DIEE W G+KG IDA++ V
Sbjct: 70 KEIETFLNKHFNHRSIQTDT--------ETIAICEVNDIEENIWCHHLGVKGRIDATVSV 121
Query: 601 KIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKH-IDSGLLYYL 659
++ + I+PLE KTG+ S EH Q+ LY ++M+ + H +++GLL YL
Sbjct: 122 SSDATKKTFE--IMPLELKTGR---ASYSFEHLGQLALYQMMMN--LVGHEVNAGLLLYL 174
Query: 660 QSDQTQGVMVQRSDLVGLIMRRNEFANDI----IKASTTQQ-----LPPMLRAYGGNKEC 710
+ + V R+ LI+ RNE A + +K + TQ+ P + + C
Sbjct: 175 KEGKCSRVTANRNMKRDLIILRNEVARSLSKWMVKDNITQKGSLAMKPTLPDPINNERAC 234
Query: 711 S-----------------------GLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQ 747
+ GL + + HL T + W LI LE +
Sbjct: 235 TKCPYNTVCITLLKSEREGTVTNYGLSILAEEACGHLRTKDVDYFIQWSGLIYLETHDET 294
Query: 748 V----VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLN 803
V V+N +W S C+ ++L + D+ + + F L
Sbjct: 295 VQSRNVQN-MWNSSPKERAETGRCIYGLILVSPVR----IVDDLYFHTF--------KLE 341
Query: 804 ASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLR 863
A+ + +P K +D T + G+Y+I ST S R+AVASG I + + VSF + L
Sbjct: 342 AA------SSTLP-KALD-TFQVGEYIICST-SKRIAVASGYIISHASNEIVVSFERDL- 391
Query: 864 LPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPR 923
+++ A++ + +D++ + S + NL L + SQ RR+I+D E P
Sbjct: 392 ----STNYGAETFI-----LDQNTLYKS-TFNLSNLALLLFNDDRCSQYRRIIIDREKPT 441
Query: 924 FDSGSVF-SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
F G + S P I K LN Q+ A +K K Y L+ G+PGTGKT T+V ++
Sbjct: 442 FSDGFLSKSMIPKAKEIL--KKLNRHQKNAALKAAATKSYCLLKGLPGTGKTQTIVGLIR 499
Query: 983 ALLMRGASILLTSYTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEI--QKHCLSAMNIN 1039
L + G SILLTS T+SAVDN+L +L Q + F+R+G + + + + + +
Sbjct: 500 LLSLLGQSILLTSSTHSAVDNVLKRLLPFQDLKFIRLGSIDRIDPAVASSAEAIVTEHCD 559
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
S E++ + +Q K+V VTC G +PL+ + FD CI+DEA Q P + PL+ + +F+L
Sbjct: 560 SPEKLSEVYEQYKIVGVTCQGTGHPLINKRLFDFCIVDEATQVFQPSLIRPLLRSKRFLL 619
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGD QLPP+++S EAR G S+F RL +E I L +QYRM + + +L+N Y
Sbjct: 620 VGDPEQLPPVIKSVEARSLGACESMFHRLDQEGSFYI--LPTQYRMNRVLTKLANEFAYN 677
Query: 1160 DRLSCGSDEIANAKIKVSDLSS------CSPWLKEALNPCRPVIFVNTDMLPAY------ 1207
+L CG+D + N I + +L + WL + ++ + V D Y
Sbjct: 678 GKLICGNDIVENNTINLPNLENIRRIYEVERWLLKMISNQIDLSVVLVDTGNTYQMNLNY 737
Query: 1208 -------------EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
++K+ N E ++ ++ ++ +E + IGII P+ +Q LI
Sbjct: 738 RKLNEISTSITDDQSKNAMNCTNVSEIAIVVYVSWAFLQAGVEPESIGIIAPFRAQVELI 797
Query: 1255 --------------RHSLS-----------------VSSVEIHTIDKYQGRDKDCILVSF 1283
RHS S ++E++TID++QG+DK IL S
Sbjct: 798 RKLMKKLFEKQKYTRHSSSSNHNVIYTKENVEQLNHTCNIEVNTIDQFQGKDKKIILFSC 857
Query: 1284 VRSSE-------NPRNCTSS----LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
+SS N SS +L D R+ VA+TRAK+KLI++G TL K
Sbjct: 858 TKSSNLSDDIWINKGKERSSHGYEILSDKSRLTVAITRAKEKLIIIGDRLTLDSYAPFKK 917
Query: 1333 LINKVGEQSGI 1343
L N + S I
Sbjct: 918 LFNVASKISNI 928
>gi|367040429|ref|XP_003650595.1| hypothetical protein THITE_131345 [Thielavia terrestris NRRL 8126]
gi|346997856|gb|AEO64259.1| hypothetical protein THITE_131345 [Thielavia terrestris NRRL 8126]
Length = 1447
Score = 300 bits (769), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 196/627 (31%), Positives = 317/627 (50%), Gaps = 81/627 (12%)
Query: 382 ADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRE 441
AD + P K+L + E++ E + VHL DWF T +P V++IG F+ G+C +
Sbjct: 490 ADERGREFPEKILFVQAERTKEVKMVHLRGDWFETQASPEAYVHIIGSFEPSGRCVIDNN 549
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQAGLMKE 500
+ LI+HPD LVS T VA SF+C RR+VL +R+K + + AL+ GT+LH++FQ +M
Sbjct: 550 QHMLILHPDQLVSSTVVADSFTCMRRAVLQDRVKATGEATPALVYGTILHEVFQEAMMAN 609
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
+ FL L+K++E LY V+ D H L+ +P++ +W F + +
Sbjct: 610 KWDLGFLGSVIDKTLRKHLEDLYVIKVSLEDAHSHLLSKMPELASWARAFVAAVPRSDAF 669
Query: 561 VDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
V G +G + + +S++ D+EE W+P YGLKG IDA+++V + + + +P E K
Sbjct: 670 VQ-GKNGERVNMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDGKTS-RTLTVPFEVK 727
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
TGK ++ H+AQ +LY LL+S+RY I G+LYY+++ QT + R +L +IM
Sbjct: 728 TGK----NATANHQAQTVLYNLLLSDRYDIEIVYGILYYMETSQTLRIPAIRHELRHMIM 783
Query: 680 RRNEFANDIIKASTTQQLPPMLR--------------------AYGGNKECSGLGNMFDS 719
+RN A I S QLP M R A GN E SGL FD
Sbjct: 784 QRNTLACYIRDRSV--QLPLMKRSKNACAKCYAQASCFTYHKLADDGNGETSGLDEKFDE 841
Query: 720 HIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD--ASN 777
+ HLT AH F W+ L+ +E KE Q ++ E+W + C +++++ +++
Sbjct: 842 AVKHLTPAHKEFFLKWEELLTMEEKESQKLRRELWTMVSTEREKLGRCFANVIIQEGSAS 901
Query: 778 EHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD 837
E + + NRF Y FV++ P+P + +D L G+ +++S E
Sbjct: 902 EDKNQAKINRFSYTFVKEK-PAPGFSF---------------LDSQLTVGEPIVVSDEQG 945
Query: 838 RLAVASGLITEISRFHVSVSFSKPL-----RLPGRN---------------SSSDADSLL 877
A+A G +T + + +SV+ + L R PG + ++ + L
Sbjct: 946 HFALALGYVTAVRKHRISVAVDRRLHNARIRRPGFDPVDNQVFASIMEVVPEGAEPEQSL 1005
Query: 878 HEV------WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQLRRMIVDLEAPRFDSGSVF 930
++ +R+DKDE + +R NLVQ+ S+++RR++VDL PRF +
Sbjct: 1006 GKIKEAPIRYRLDKDEFSNGMATVRNNLVQVMADGPFGSAEIRRLVVDLAPPRFKT---- 1061
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVL 957
P + + SLN DQ+ A+ K L
Sbjct: 1062 --TPTQYTVPGKDSLNVDQKAAVEKAL 1086
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 89/149 (59%), Gaps = 12/149 (8%)
Query: 1185 WLKEALNPCRPVIFVNTD-MLPA-YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
WL + L P V FVNTD +LPA E + NP EA ++A++ L+ + +IG
Sbjct: 1149 WLADLLCPSARVRFVNTDALLPASREQAKGNRIVNPCEARVVAQLVDALLAAGVPASEIG 1208
Query: 1243 IITPYNSQANLIRHSLSV------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-S 1295
++T Y SQ L++H+L VE+HT D++QGRDK +L+S VRS+E C
Sbjct: 1209 VVTHYRSQLALLKHTLRALGGGGAGDVEMHTADRFQGRDKAVVLLSLVRSNEQ---CAIG 1265
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
LL DW RINVA TRAK KL++VGS TL
Sbjct: 1266 DLLKDWRRINVAFTRAKTKLLVVGSRATL 1294
>gi|367029903|ref|XP_003664235.1| hypothetical protein MYCTH_2119294 [Myceliophthora thermophila ATCC
42464]
gi|347011505|gb|AEO58990.1| hypothetical protein MYCTH_2119294 [Myceliophthora thermophila ATCC
42464]
Length = 1427
Score = 300 bits (767), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 203/654 (31%), Positives = 322/654 (49%), Gaps = 87/654 (13%)
Query: 355 PTDPPENVNGTSSCHFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWF 414
PT P+ + +LV V E + D + P K+L + E++ R VHL DW+
Sbjct: 469 PTQKPKAIQ-----RYLVTNVLESSH-VDEHGREHPEKILLVQAERTKAVRTVHLRGDWY 522
Query: 415 HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL 474
T +P V++IG F+ G+C + N LI+HPD LVS T VA SF+C RR+VL +R+
Sbjct: 523 DTQASPKAYVHIIGAFEPSGRCIIDNNRNILILHPDQLVSSTVVADSFTCMRRAVLQDRV 582
Query: 475 KCSERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIH 533
K + + + L+ GT+LH++FQ LM FLE L+++IE LY V+ D
Sbjct: 583 KATSEATAPLVYGTILHEVFQEALMANNWDSDFLESVISTALRRHIEDLYVIKVSFEDAQ 642
Query: 534 KTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKG 592
++ +P++ W F + V G +G + + +S++ D+EE W+P YGLKG
Sbjct: 643 SHVLSKMPELKAWAQAFVAASPKPGAFVQ-GRNGERVNMCVSKLLDVEEHVWSPMYGLKG 701
Query: 593 MIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID 652
IDA+++V + + + +P E KTGK ++ H+AQ +LY LL+S+RY I
Sbjct: 702 NIDATVQVTMREGKTS-RTLTVPFEVKTGK----NATANHQAQTVLYNLLLSDRYDVEIA 756
Query: 653 SGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLR---------- 702
G+LYY+++ QT + R +L +IM+RN A I + S QLPPM R
Sbjct: 757 YGVLYYMETSQTLRIPAVRHELRHMIMQRNTLACYIRERSV--QLPPMKRSKNACARCYA 814
Query: 703 ----------AYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE 752
A GG E SGL FD + HLT H F W+ L+ E KE Q ++ E
Sbjct: 815 QTSCFTYHKLADGGKGETSGLDEKFDEVVKHLTPTHRDFFLKWEDLLTKEEKESQKLRRE 874
Query: 753 IWCSRGSGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSL 810
+W + C +++V++ +++E + + NRF Y FV+++ P+P +
Sbjct: 875 LWTMVSTEREKLGRCFANVVIEEGSASEDKHKAKINRFSYTFVKEN-PAPGFSF------ 927
Query: 811 IGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLP 865
+D L G+ +++S E A+A G +T + + +SV+ + L R P
Sbjct: 928 ---------LDSQLTVGEPIVVSDEQGHFALALGYVTAVKKNRISVAVDRRLHNARIRQP 978
Query: 866 GRNSSSD------------------ADSLLHEV---WRIDKDEIMTSFSVMRYNLVQLFL 904
G + + + + E +R+DKDE S +R NLVQ+
Sbjct: 979 GFDEVDNQVFASIMEVAPEGGNPLQSQGKIREAPIRYRLDKDEFSNGMSTVRNNLVQIMA 1038
Query: 905 QSA-QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
S+++RR++VDL PRF + P + SLN DQ+ A+ K L
Sbjct: 1039 DGPFGSAEIRRLVVDLVPPRFKT------TPTQYTVPGRDSLNVDQKAAVEKAL 1086
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 19/171 (11%)
Query: 1185 WLKEALNPCRPVIFVNTD-MLPA-YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
WL + L P V VNTD +LPA E + NP EA ++A++ L+ + +IG
Sbjct: 1139 WLADLLQPSARVRLVNTDALLPASREQAKGNRIVNPCEARIVAQLVDALLAVGVPASEIG 1198
Query: 1243 IITPYNSQANLIRHSL---------------SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
I+T Y SQ L++H+L + VE+HT D++QGRDK +++S VRS+
Sbjct: 1199 IVTHYRSQLALLKHTLLRSAAAATAAAIGGGDIREVEMHTADRFQGRDKQVVILSLVRSN 1258
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
E + LL DW RINVA TRAK KL++VGS TL ++L VG
Sbjct: 1259 E--QCAIGELLKDWRRINVAFTRAKTKLLVVGSRSTLGGCGEDEMLARFVG 1307
>gi|336465901|gb|EGO54066.1| hypothetical protein NEUTE1DRAFT_131702 [Neurospora tetrasperma FGSC
2508]
gi|350287264|gb|EGZ68511.1| Dna2-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 1505
Score = 293 bits (749), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 207/645 (32%), Positives = 323/645 (50%), Gaps = 84/645 (13%)
Query: 369 HFLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIG 428
+LV V E + D +SP K+L + +++ R +HL DWF T + V++IG
Sbjct: 507 RYLVTNVLESSY-TDDRGRESPEKILIVQADRTNSVRTIHLRGDWFDTPASVSAYVHIIG 565
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGT 487
+F+DQGKC V N LI+HPD L+S T VA SFSC RR+VL +R+K S+ S + + GT
Sbjct: 566 QFEDQGKCVVDNNQNMLILHPDQLISSTVVADSFSCMRRAVLQDRVKATSDLSPALVYGT 625
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWI 547
+LH+IFQ L+ FL L+K++E LY V +D + +P++ +W
Sbjct: 626 ILHEIFQEALVANKWDPAFLTNVINKTLEKHLEDLYILKVGMDDAKSHVQSKMPELRSWA 685
Query: 548 ILFKDSQDLNTPTVDFGSDGLKK-LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE--- 603
LF SQ V G +G K + +S++ D+EE W+P YGLKG IDA+++V +
Sbjct: 686 QLFVTSQPKPDAIVQ-GRNGDKATMCVSKLLDVEEHVWSPMYGLKGNIDATVQVTMRDPP 744
Query: 604 -----SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYY 658
SK + + +P E KTGK N H+AQ LY LL+S+RY I G+LYY
Sbjct: 745 ARGSSSKASTTKTLTVPFEVKTGKNVNSN----HQAQTALYNLLLSDRYDIEIVYGILYY 800
Query: 659 LQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPML-------RAYG------ 705
+++ QT + R ++ +IM+RN+ A I + S QLPPM R Y
Sbjct: 801 METSQTLRIPAVRHEIRHMIMQRNQLACYIRERSV--QLPPMKKSKNACGRCYAQTTCFI 858
Query: 706 -------GNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG 758
G+ E S + FD + HL+ H F W+ L+ E KE Q ++ E+W
Sbjct: 859 YHKLADDGDGETSAMNEKFDEVVNHLSPTHKEFFLKWEELLTKEEKESQKLRRELWTMVS 918
Query: 759 SGGNHFTGCLSSIVLD---ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAI 815
+ C ++++++ A HQ+ + NRF Y F++ P+P +
Sbjct: 919 TEREKVGRCFANVIIEEGSAYENHQQMGKTNRFAYTFIKDK-PAPGFSF----------- 966
Query: 816 PTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVS------------------ 857
+D L G+ +++S E A+A G +T + + ++V+
Sbjct: 967 ----LDSQLTVGEPIVISDEQGHFALALGYVTSVRKTRIAVAVDRRLHNARVRQPGFDEA 1022
Query: 858 ----FSKPLRLPGRNSSSDADSLLHEV-WRIDKDEIMTSFSVMRYNLVQLFLQSA-QSSQ 911
F+ +++PG ++ D V +R+DKDE + +R NLVQ+ S Q
Sbjct: 1023 DNQVFASIMQVPGSGDNAPEDREAGPVRYRLDKDEFSNGMATVRNNLVQIMADGVFGSRQ 1082
Query: 912 LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
+RR++VDLEAPRF +V +Q L S + LN DQ+ A+ K+
Sbjct: 1083 IRRLVVDLEAPRFK--AVPTQY-ILPSTASGQGLNVDQKAAVEKI 1124
Score = 108 bits (269), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 45/255 (17%)
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A +F V Y LP + +G +++ ++ + E + AL +++ + S
Sbjct: 1092 APRFKAVPTQYILP-------STASGQGLNVDQKAAVEKIPDMDALATKHFDADSFLAYS 1144
Query: 1154 --NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
+ L GD+LS L++C WL++ L+P V F+NTD L + ++
Sbjct: 1145 EQHPLKEGDKLSF---------CPYPTLTTC--WLRDLLDPSARVRFINTDSLLPHSREE 1193
Query: 1212 H----QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--------- 1258
Q + NP+E+ ++ ++ L+ + +IG++T Y SQ L++H++
Sbjct: 1194 KSTRGQRIVNPLESRIVCQLVDSLLTVGVPASEIGVMTHYRSQLALLKHNMKNTLGGSAG 1253
Query: 1259 --------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALT 1309
+ +E+HT D++QGRDK +++S VRS+E C+ LL DW RINVA T
Sbjct: 1254 AIRAGVKVAAEEIEMHTADRFQGRDKSVVVLSLVRSNEG---CSIGELLKDWRRINVAFT 1310
Query: 1310 RAKKKLIMVGSCRTL 1324
RAK KL++VGS TL
Sbjct: 1311 RAKTKLLVVGSRETL 1325
>gi|341881179|gb|EGT37114.1| hypothetical protein CAEBREN_08313 [Caenorhabditis brenneri]
Length = 1044
Score = 290 bits (741), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 270/979 (27%), Positives = 459/979 (46%), Gaps = 126/979 (12%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVIG-EFDDQGKCDVGRENNFLIVHPDVLVSGTR 457
++ G+ R V+L + W I PG+T+N+IG E V + +I++P+ LV T
Sbjct: 130 DKDGKTRMVYLQDRWADLNIEPGNTINLIGAEVWGNDDYIVSDKQGIVILNPNALVPCTA 189
Query: 458 VAASFSCPRRSVLDERLKCSERSISA-LLGTLLHQIFQAGLM-KEIPTMKF-LEEYARLV 514
+A+S C R++VL+++ K S A LLGT++H+IFQ + K+ P ++ L +
Sbjct: 190 IASSMFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRPLVENDLLKIWTTQ 249
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWI-ILFKDSQDLNTPTVDFGSDGLKKLKI 573
K E L A N I L + WI + S T S K ++
Sbjct: 250 APKYAEELVALSFTPNCIDAELKPYFSIICQWINKHYPISNSFFTKREPLPS----KSEL 305
Query: 574 SEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHR 633
EV DIEE W K GLKG ID ++R K + GM LE KTGK +S EH
Sbjct: 306 LEVYDIEENIWDYKLGLKGKIDVTMRTKPQ------KGM-ESLELKTGK---SNASSEHS 355
Query: 634 AQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKAST 693
AQ G+ ++ V + +L+G++ +RN ++ + T
Sbjct: 356 AQ-----------------DGV--------SRCVTPRVFELIGILQQRNSLSS-YFEDPT 389
Query: 694 TQQLPP---------------MLRAYGGNKECSGLGN-MF----DSHIYHLTTAHCSFLR 733
++ LPP M Y +E N MF ++ + HL ++H ++
Sbjct: 390 SENLPPPRKDIRFCDKCDRKVMCAFYQKTEEKYSKSNEMFRNFSENEMAHLESSHLDYVS 449
Query: 734 HWDRLIDLEAK----EMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV 789
W R I E K ++ ++W C+ +
Sbjct: 450 KWIRWISAEWKCERDRVETSSRDLWLKSVPERVENGFCMPDL------------------ 491
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
P A+ +I +K R G+ +LS S +A++ ++ +
Sbjct: 492 -------YPVSEEKANSQRIIITLNQKSKVKVSPFRQGEVCLLSN-SKNVAISFVVVDHV 543
Query: 850 SRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQS 909
S + VS K ++ + D+ H +DK M++ + NLV
Sbjct: 544 SDDLIKVSSDKAVK-------AHYDAPFH----LDKYVSMSTHATTLGNLVYFSQNDEIG 592
Query: 910 SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMP 969
+LR ++VDL P + ++ I + LN++QRRA++ L+ +DY ++ G+P
Sbjct: 593 KRLRSVLVDLLPPTVPEITGMDITSSIKKIIIKAKLNNEQRRAVLCALSTEDYVIVEGLP 652
Query: 970 GTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL--KSQSIDFVRIGRHEVVHKE 1027
G+GKT+ + ++ L+ +LL ++T+SAVDN+L KL S +R+G + +
Sbjct: 653 GSGKTTLISVLIQCLVATNKKVLLAAFTHSAVDNILGKLIKDVSSEKILRLGSSSTIKDD 712
Query: 1028 IQKHCL-----SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL-TDKKFDVCIMDEAGQ 1081
I+K L S + + +K+ + +VA TC + LL + + FD I+DEA
Sbjct: 713 IRKMTLKEKLESESSQDYYAAVKRVMKTTPIVACTCHHVPRELLFSYRHFDAVIVDEASM 772
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
P+ L L + KFVLVGD QL PLV S A++ G +S +L + HP+ + +L S
Sbjct: 773 VLEPLLLPVLATSKKFVLVGDCKQLTPLVVSRRAKQEGASVSTMEKLQQHHPKVVVSLTS 832
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKI-KVSDLS---SCSPWLKEAL--NPCRP 1195
QYRM + I LS+ L Y +RL CG++ I+ + + + D + ++++AL N
Sbjct: 833 QYRMNKEISMLSSKLFYDNRLICGNEAISRSSLDRTGDYNIPEGLDDYIRKALSGNIADS 892
Query: 1196 VIFVNT--DMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
IF+NT + + KD + + N EA ++A++ Q +++ ++ +IG+++ Y Q
Sbjct: 893 CIFLNTQSETNSLMQCKDEEGGGMINDGEARIVAELCQRFIESGVKPHEIGVMSAYRRQV 952
Query: 1252 NLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
+ ++ ++ +E++TID YQGR+K I+ S + + + S LL D RINVALTRA
Sbjct: 953 DQLKSFINNDLLEVNTIDSYQGREKRVIVWSLTYTETSTKK--SELLRDERRINVALTRA 1010
Query: 1312 KKKLIMVGSCRTLSKVPLL 1330
++KL++VG ++ +P+L
Sbjct: 1011 RQKLVVVGCKKSAESIPVL 1029
>gi|339249129|ref|XP_003373552.1| DNA replication factor Dna2 family protein [Trichinella spiralis]
gi|316970291|gb|EFV54264.1| DNA replication factor Dna2 family protein [Trichinella spiralis]
Length = 1135
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/455 (37%), Positives = 273/455 (60%), Gaps = 31/455 (6%)
Query: 893 SVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRA 952
+++ L Q+ +Q +++ + R++I+DL+ P F S+ S+ ++ K LN +Q+ A
Sbjct: 601 TIITVELQQIDVQFSRNRK-RQLIIDLDEPHF-RISLCSEIVQKMKLFC-KGLNAEQKSA 657
Query: 953 IIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS 1012
I+K + A DY LI G PG+GK+S ++ ++ + G S+L+ +YTNSAVD++L+KLK+
Sbjct: 658 IVKTMLADDYVLIKGFPGSGKSSAVIALIRTFISNGNSVLVCAYTNSAVDHILLKLKTNY 717
Query: 1013 -------------IDFVRIGRHEVVHKEIQKHCLSAMNINS---VEEIKKRLDQVKVVAV 1056
D +R+G +VH +I++ L A+ N ++E+ + L +V
Sbjct: 718 PTTKPIAILKLHITDILRLGPSFIVHPDIRQFTLEAIFANKEPRLDEVAEILSSTLLVGC 777
Query: 1057 TCLGIT-NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
TC T +PLL + F++CI+DEA T +S+GPL+ A KFVLVGD QL PLVQS A
Sbjct: 778 TCTTATMHPLLRKRTFNLCIIDEATLATEAMSIGPLLAAEKFVLVGDPLQLKPLVQSERA 837
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA--K 1173
R+ GM+ISLF +L +++P A+ L+ QYRM + I +LSN + Y L +DE+ANA
Sbjct: 838 RKQGMDISLFSKLEQKYPDAVVTLKRQYRMNREICKLSNQMFYNGELVAANDEVANAFLN 897
Query: 1174 IKVSDLSSCSPWLKEALN--PCRPVIFVNTDMLPAYEAKDHQT--LNNPVEACLIAKITQ 1229
+ V D + PW++ L+ P V+F++T A + N +E L+ K+ Q
Sbjct: 898 VTVDDDVAEEPWVRRCLSSLPEHAVVFLDTSNCKDNSATRQGIAHVENKLEVDLVVKLCQ 957
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVS---SVEIHTIDKYQGRDKDCILVSFVRS 1286
K+ ++ +IG+++ + +Q IR SL S +E++T+D+YQG+DKD I+VSFV +
Sbjct: 958 TFSKSGLDDDEIGVMSIFKTQVECIRRSLKSSGSNGIEVNTVDQYQGKDKDVIIVSFVWT 1017
Query: 1287 SENPR--NCTSSLLGDWHRINVALTRAKKKLIMVG 1319
E R N T LL + R+NVALTRA+KKLI+VG
Sbjct: 1018 KELKRKLNTTCHLLKNARRVNVALTRARKKLILVG 1052
Score = 99.8 bits (247), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 165/384 (42%), Gaps = 57/384 (14%)
Query: 399 EQSGEERAVHLWEDWFHTVIAPGDTVNVI-----GEFDDQGKCDVGRENNFLIVHPDVLV 453
+ G + V L E W + GD V E D+ + ++ +I++P +V
Sbjct: 163 DSGGTAKRVWLEEYWSDGMFKEGDKVRAFLPKNSSEMDE---FHISNKSGAVILNPSSVV 219
Query: 454 SGTRVAASFSCPRRSVLDERLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEEYAR 512
R++ C R+SVL E K ++ + +G + H++FQ + + I L +
Sbjct: 220 GVNRISNGHFCTRKSVLMEIFKGFDKPGLKTQVGIIAHKMFQRAVKESISDEDTLRKMI- 278
Query: 513 LVLQKNIESL---YACGVNE---NDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSD 566
L + KN+E + Y ++ N ++ V+AI K + + ++ P+
Sbjct: 279 LEISKNVEFVQNQYYYDIDPVALNSELQSFVKAIAKFVQNFLSNRNPLPGVVPST----- 333
Query: 567 GLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
I V +EE + K+G +G ID ++ VK+++ + ++P E KTGK+
Sbjct: 334 -----VIDRVLAVEEEMISEKFGFRGSIDMTMGVKVDADQK---STLMPFELKTGKV--- 382
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNE--- 683
+H AQV+LY LL+S + + GLLYY D+ + V + ++L GL+ RNE
Sbjct: 383 SQYGDHIAQVMLYCLLLSSNNHESCERGLLYYCGGDELKAVDTKMNELNGLLRMRNEVTY 442
Query: 684 ----FAND-----------IIKASTTQQLPPMLRAYGGNKEC-------SGLGNMFDSHI 721
F +D I +Q P ML K C S M ++ +
Sbjct: 443 YLHRFFDDPEACDLLLPGPIKNMKICRQCPQMLNCCLRQKICDEAFIRDSPWDAMLEAEL 502
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKE 745
+HL H ++ W + +E E
Sbjct: 503 WHLNKEHVQYVNRWTTWLRMEGTE 526
>gi|307200842|gb|EFN80895.1| DNA2-like helicase [Harpegnathos saltator]
Length = 963
Score = 288 bits (737), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 251/848 (29%), Positives = 395/848 (46%), Gaps = 128/848 (15%)
Query: 413 WFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
W + D V + E Q + + +LI PD L+SGT + + C RR+VL E
Sbjct: 124 WKDVQVKVDDIVTIQAEKKSQ-RWIIDNHRGYLITQPDKLISGTTITSGLFCSRRAVLAE 182
Query: 473 RLK------CSERSISAL-LGTLLHQIFQAGLMKEIPTM----KFLEEYARLVLQKNIES 521
R K C S + +G+L+HQ Q L + + + K L+ L L+ I+
Sbjct: 183 RFKKIESLPCPNADYSVMTIGSLVHQWLQKALRENVHALSDVVKLLDNM--LQLRDTIDY 240
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWI---ILFKDSQDLNTPTVDF-GSDGLKKLKISEVT 577
LYA ++ +D K ++E PK+ +I I +N +F GS I +
Sbjct: 241 LYASEMSLDDCRKRMMEYAPKIFQFIQHYIRGNKQSRINDLKDNFQGS-------ICNIQ 293
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE P+ G+KG ID + V I S+R I+PLE KTG+ S+EH+AQVI
Sbjct: 294 DIEENICIPQLGIKGRIDVTAEVSINSRRK-----IMPLEVKTGR---ASYSLEHKAQVI 345
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQL 697
LY ++M R + +D+GLL YL+ + Q + + L++ RN K S L
Sbjct: 346 LYFMMMGLRD-EEVDTGLLLYLKENSMQEIKSSYYEKRDLLILRNTLTYYFTKQSEDPSL 404
Query: 698 PPMLRAYGGNKE------------CSG------------------------LGNMFDSHI 721
G K CS L + +
Sbjct: 405 SADFAESGTLKAMELPEPINHPTACSRCPYQVVCCAYLAKDPNVNLPPLHPLTTLIKKLL 464
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNE------IWCSRGSGGNHFTGCLSSI-VLD 774
++H ++ W L+ L MQ + +W C+S++ V+
Sbjct: 465 NEFESSHLDYVIRWVGLLQL----MQSFDGDNGSLSNLWTMSPEKREAKRICISNLKVVG 520
Query: 775 ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
E RD+R+ + F R + G++ A DYV +ST
Sbjct: 521 KVVE-----RDDRYQHVFARADIK--------GETTEDGAFSN-----VFAVNDYVTVST 562
Query: 835 ESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSV 894
++ R+ + +G I +IS +SV K + R +D ++ IDK S
Sbjct: 563 DT-RINITTGSILQISNDTISVLLDKDVM---RREDTDC-----AIFHIDKYSFTGSVFT 613
Query: 895 MRY-NLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAI 953
Y N+V L +++LRR+++D F S A + + + LN+DQ+RA+
Sbjct: 614 FDYANVVGLLSTEKANARLRRIVIDRTPATFAKSLPRSTVSAGTEMM--RDLNEDQQRAV 671
Query: 954 IKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI 1013
++ + A++Y L+ GMPGTGKT T+V V+ LL ++L+T++T+SAVDN+L+KL ++I
Sbjct: 672 LRAVAAEEYVLVKGMPGTGKTQTLVVLVELLLKLDFTVLITAHTHSAVDNVLLKLLDRNI 731
Query: 1014 DFVRIGRHEVVH-------KEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
DF+R+G + VH +E C ++ E+++ + +VV VTC G +PLL
Sbjct: 732 DFLRLGATKQVHPLLTCKTEEYATKC-----CDTPEKLEMLYNDKRVVGVTCYGAYHPLL 786
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDVC++DE+ Q T P L PL A +FVLVGD QLPP+V+S A + G + SLF
Sbjct: 787 RRRSFDVCVVDESTQVTQPTVLRPLYSARRFVLVGDPNQLPPVVKSRTAVKLGADESLFV 846
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD---LSSCS 1183
RL E+ L QYRM + IM+L+N Y +L + ++ NA + + LSSC
Sbjct: 847 RLDSENNTV--NLTKQYRMNRRIMKLANDTAYRGKLMPSNKQVENATLICAHAEVLSSCE 904
Query: 1184 PWLKEALN 1191
W++ L+
Sbjct: 905 AWVRRTLS 912
>gi|116202197|ref|XP_001226910.1| hypothetical protein CHGG_08983 [Chaetomium globosum CBS 148.51]
gi|88177501|gb|EAQ84969.1| hypothetical protein CHGG_08983 [Chaetomium globosum CBS 148.51]
Length = 1190
Score = 286 bits (732), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 165/403 (40%), Positives = 231/403 (57%), Gaps = 57/403 (14%)
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC-LSAMNINSVEEIKKR 1047
A++LLTSYT++AVDN+L+KLK I +R+G VH E+Q L+ S EEI+
Sbjct: 667 ATVLLTSYTHTAVDNILLKLKDDKIPILRLGTPAKVHPEVQNFATLANERKKSFEEIRSA 726
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+VA TCL I++P+ ++ FD CI+DEA Q TLP+ LGP+ A FVLVGDH QLP
Sbjct: 727 WHDTPIVATTCLTISHPVFNERTFDYCIVDEASQITLPICLGPIRMARTFVLVGDHNQLP 786
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
PLVQ+ EAR G++ISLF+ LS+ HPQ++ L+ QYRM + IM LSN LIY RL CG++
Sbjct: 787 PLVQNEEARLGGLDISLFKLLSDTHPQSVVNLEHQYRMSEDIMTLSNTLIYNGRLKCGTE 846
Query: 1168 EIANAKIKV-----------------------------------------SDLSSCSPWL 1186
+ +A++ V S L SC WL
Sbjct: 847 SLRHAELHVPNMDALRARHFDAASFISHSQSQSKQNLSPSKPRPTTFCPASRLGSC--WL 904
Query: 1187 KEALNPCRPVIFVNTD-MLP-AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ ++P V VNTD +LP + E + NP EA +A++ L+ + +IG++
Sbjct: 905 TDLIHPSARVRLVNTDALLPHSLEQAKGNRIVNPCEARAVAQLVDALLAVGVPPSEIGVV 964
Query: 1245 TPYNSQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
T Y SQ L++H+L SS VE+HT D++QGRDK +++S VRS+E +
Sbjct: 965 THYRSQLALLKHTLLRSSSGAGGAARDVEMHTADRFQGRDKSVVILSLVRSNE--QCAIG 1022
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
LL DW RINVA TRAK KL++VGS TL + + ++L VG
Sbjct: 1023 ELLKDWRRINVAFTRAKTKLLVVGSRSTLGRCGVGEMLARFVG 1065
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 45/297 (15%)
Query: 586 PKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSE 645
P YGLKG IDA+++V + + + +P E KTGK ++ H+AQ +LY LL+S+
Sbjct: 356 PMYGLKGNIDATVQVTMRDGKKS-QTLTVPFEVKTGK----NATSNHQAQTMLYNLLLSD 410
Query: 646 RYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF-------ANDIIKASTTQQLP 698
RY I G+LYY+++ QT + R DL +IM+RN+ A+ I T +
Sbjct: 411 RYDLEIVYGVLYYMETSQTLRIPAIRCDLQHMIMQRNKLVLCPRHRASSITSWPTAVTVR 470
Query: 699 PMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG 758
P+ G ++ D + HLT H F W+ L+ E KE Q ++ E+W
Sbjct: 471 PL-----------GWASILDELVKHLTPTHRDFFLKWEDLLTKEEKESQKLRRELWTMVS 519
Query: 759 SGGNHFTGCLSSIVLD--ASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
+ C ++++++ +++E ++ + NRF Y F+++ + + ++ S S +
Sbjct: 520 TEREKLGRCFANVIIEEGSASEDKQQVKINRFSYTFIKEELGT-RVSLSWTRSFL----- 573
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-----RLPGRN 868
S + + E A+A G +T + + +SV+ + L R PG N
Sbjct: 574 ---------SENPLWYRDEQGHFALALGFVTAVKKQRISVAVDRRLHNARIRQPGFN 621
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWF-HTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPD 450
++L + E++ + VHL DW+ T +P V++IG F+ G+C + +N LI+HPD
Sbjct: 258 QILLVQAERTNAVKTVHLRNDWYDETEASPKAYVHIIGNFESSGRCIIDNNHNTLILHPD 317
Query: 451 VLVSGTRVAASFSCPRRSVLDERLKCSERS 480
LVS T VA SF+C RR+VL +R+K + S
Sbjct: 318 QLVSSTVVADSFTCARRAVLQDRVKATSES 347
>gi|66820592|ref|XP_643888.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
discoideum AX4]
gi|60472328|gb|EAL70281.1| DEAD/DEAH box helicase domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1838
Score = 280 bits (716), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 243/413 (58%), Gaps = 19/413 (4%)
Query: 863 RLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP 922
+L G N+ + L WR+D DE ++ S+++ NL LFL+ Q +LR +IVDLEAP
Sbjct: 1242 QLRGLNNYVNNSKLTPFKWRVDIDEQLSGLSIVKSNLFNLFLKENQ--KLRSLIVDLEAP 1299
Query: 923 RFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
FD + ++ + LN DQR AIIK L+AKDY+LI GMPGTGKT+ ++ +
Sbjct: 1300 IFDKLEQENYWKSIDFQNDYPLLNIDQRNAIIKTLSAKDYSLIHGMPGTGKTTLVISLIH 1359
Query: 983 ALLMRGASILLTSYTNSAVDNLLIKLKSQ--SIDFVRIGRH-EVVHKEIQKHCLSAMNIN 1039
L G +L+TS+T++++D+LL+K Q +I+ +R+ + + + L +
Sbjct: 1360 ILWRLGKKVLITSFTHTSLDHLLLKFNKQYPNIEMLRVASSLNQIDPSLHRFTLEKQSFG 1419
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
++ + K+ L++ ++VA +CLGI + L +FD CI+DEA + P+S+GP++ FVL
Sbjct: 1420 NITQSKQYLERQQLVATSCLGINHQCLLKMQFDYCIIDEASILSQPISMGPILKCKSFVL 1479
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
VGDH+QLPP+V + EA + G++ISLF++LS HP ++S L QYRMC IM LSN LIY
Sbjct: 1480 VGDHHQLPPIVNNKEAGKLGLDISLFKQLSTSHPSSVSNLYHQYRMCNSIMSLSNHLIYN 1539
Query: 1160 DRLSCGSDEIANAKIK------------VSDLSSCSPWLKEALNPCRPVIFVNTDML-PA 1206
+RL CG+ I+N ++ + L + W + NP VIFVNTD L +
Sbjct: 1540 NRLVCGNQSISNLSLQTNYYHNNNNTTHIDLLDHINNWPQIICNPNSSVIFVNTDQLNNS 1599
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELV-KNEIEGKDIGIITPYNSQANLIRHSL 1258
E+ + N EA ++A +T L+ K I IGIITP Q N I+ S+
Sbjct: 1600 TESSNGDLFYNQTEANIVAILTNCLINKLNINQSQIGIITPIRFQLNFIKKSI 1652
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 42/237 (17%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
K L +E GE R + L ++W +T + PGD VNVIGEFDD G+ + N LI+HPD+
Sbjct: 625 KTLSGFSESIGESREIQLLDEWIYTPVRPGDIVNVIGEFDDNGEIIINNIQNLLILHPDI 684
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC--SERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
L++GT + S +C RRSVL E+++ S S + G+++H+IFQ L + +
Sbjct: 685 LITGTELGGSLTCTRRSVLKEQIRVGNSNSSTVPIFGSIVHEIFQECLKNNRFHLDDINT 744
Query: 510 YARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVD------- 562
+ + ++ K S + G++ + +T A+ + NW+ PT+D
Sbjct: 745 FKQEIIGK---STFQLGLSS--LGETQDTALNHLENWL-----------PTIDKFAKTFI 788
Query: 563 ------FGSDGLKK-----------LKISEVTDIEEMAWAPKYGLKGMIDASIRVKI 602
+ LKK L IS++ +IEE W+ YGLKG ID+S+ +K+
Sbjct: 789 LPSSSSSSASSLKKNLIEINSEKWHLSISKILEIEENIWSLMYGLKGKIDSSLEIKL 845
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 63/268 (23%)
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV------ 667
+P E KTGK P + H +QV++YTLLM++RY + I+ G+LYYL+S + + V
Sbjct: 906 VPFEIKTGK-PYQIPYISHSSQVLIYTLLMNDRYDQDIEMGILYYLKSQEFKSVGLNYGL 964
Query: 668 ----MVQRSDLVGLIMRRNEFA-------NDIIKASTTQQLPPMLRAY------------ 704
+ +R+ + LI+ RN A ++K + LP MLR Y
Sbjct: 965 LHPILFERNQIRSLIVSRNLLAYFLNLNSQPLLKPNPI--LPEMLRDYHSCTKCYSIDPC 1022
Query: 705 --------GGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCS 756
G++ S LG++F HL++ H ++L++W+++I LE + IW
Sbjct: 1023 VLYHKAIENGDQFTSSLGDLFLEKTNHLSSIHINYLKNWNKIISLEYSIKNNKRKLIWNK 1082
Query: 757 RGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIP 816
G C+ ++L S E+ S F Y F P
Sbjct: 1083 SRKFGEKNNSCIGELIL-ISEEY--SEITETFSYRF--------------------RVNP 1119
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASG 844
K ++ ++ GDY+++S E + SG
Sbjct: 1120 DKLLNSSISEGDYLLISVEDKYYGMGSG 1147
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+ +++I TIDK+QG+DKDCI++SFVRS+E + L+ DW R+NVA TRAKKKLI VG
Sbjct: 1748 IENLDILTIDKFQGKDKDCIIISFVRSNE--KKEIGELIKDWKRMNVAFTRAKKKLIFVG 1805
Query: 1320 SCRTLSK 1326
S +LSK
Sbjct: 1806 SKSSLSK 1812
>gi|20380180|gb|AAH28188.1| DNA2 protein [Homo sapiens]
Length = 378
Score = 278 bits (710), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 162/364 (44%), Positives = 217/364 (59%), Gaps = 23/364 (6%)
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-----CLSAMNINSVEEIKKRLDQVKV 1053
SAVDN+L+KL I F+R+G+ + VH IQ+ C S +I S+ +++ + +
Sbjct: 5 SAVDNILLKLAKFKIGFLRLGQIQKVHPAIQQFTEQEICRSK-SIKSLALLEELYNSQLI 63
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 64 VATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLNR 123
Query: 1114 EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
EAR GM SLF+RL E++ A+ L QYRM IM LSN L Y +L CGSD++ANA
Sbjct: 124 EARALGMSESLFKRL-EQNKSAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANAV 182
Query: 1174 IKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
I + S +PWL P PV F+NTD +PA E + ++N EA
Sbjct: 183 INLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNVTEA 242
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCI 1279
LI +T VK DIGII PY Q +I L S+ VE++T+DKYQGRDK +
Sbjct: 243 KLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSIGMVEVNTVDKYQGRDKSIV 302
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
LVSFVRS N LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N +
Sbjct: 303 LVSFVRS--NNDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHLNS 360
Query: 1340 QSGI 1343
+ I
Sbjct: 361 EKLI 364
>gi|326923414|ref|XP_003207931.1| PREDICTED: DNA2-like helicase-like [Meleagris gallopavo]
Length = 798
Score = 272 bits (695), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 220/686 (32%), Positives = 347/686 (50%), Gaps = 82/686 (11%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQS-GEERAVHLWEDWFHTVIAPGDTVNVIG 428
+ VLEV R + + P K L + S G+ L W + PGD V++ G
Sbjct: 17 YRVLEVRLVRR-----EGRDPEKHLAISASTSPGDTELCVLQNSWESVPVVPGDIVHLEG 71
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSE-RSISALLGT 487
+ G + ++ +LI++PD+L+SGT +++S C R++VL ER + E S L+GT
Sbjct: 72 DCSS-GTWIINEQSGYLILYPDMLLSGTTISSSIRCMRKAVLSERFRGPECGSRQTLIGT 130
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVL--QKNIESLYACGVNENDIHKTLVEAIPKMLN 545
+LH+IFQ + + K +EE A ++ QK ++ +Y + + ++ + + E +P
Sbjct: 131 ILHEIFQQSVTNNLSPEK-VEELANNIVYGQKYLKEMYHLKLKQTEVMQEIEEYLPSFFK 189
Query: 546 WIILF------KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIR 599
W F ++ L P+ D D K++I ++ DIEE W+P++GLKG ID + R
Sbjct: 190 WTEEFMHNPANQNKMQLKLPSEDKTGDCSSKVEIVDILDIEENIWSPRFGLKGKIDVTAR 249
Query: 600 VKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYL 659
VKI ++ + I+PLE K+GK N S+EHR+QVILYTLL ER + ++G L YL
Sbjct: 250 VKIH-RQCGVQSRIMPLELKSGKESN---SIEHRSQVILYTLLNLERRMDP-EAGFLLYL 304
Query: 660 QSDQTQGVMVQRSDLVGLIMRRNEFANDII----KASTTQQ------LPPMLRAYGGNKE 709
++ V R D LI RN+ A ++ K++ +Q LPP++ K
Sbjct: 305 KTGTMYPVTGTRMDRRELIKLRNQVAFYLMHSTQKSAVGRQQSQLAALPPVIDDSQACKY 364
Query: 710 CSGLGNMF-DSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCL 768
CS + N F S A SF +I + KE Q +K S G+ C+
Sbjct: 365 CSQIHNCFLYSRAVEERMAGVSF---PPAMIPIIEKETQHLKP----SXEKAGD----CV 413
Query: 769 SSIV-LDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSG 827
+++ +D E + ++++ F R++ P N L G
Sbjct: 414 GNMIRIDQVQE----VSEGQYLHSFQRKNGVVPGAN--------------------LLVG 449
Query: 828 DYVILSTESDR-LAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKD 886
D V++S E + L +A+G + EIS +S L GRN S +S +R+D +
Sbjct: 450 DRVVVSGEENGLLGLATGYVREISATKISC-------LLGRNLSKLPES---TTFRLDHE 499
Query: 887 EIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKS 944
E V NL +L S S +LR +I+D PRF SV + + K
Sbjct: 500 EGDCGIGVPFENLSKLMKDSPVSEKLRNLIIDFHKPRFIQHLSSVLPPEAKEAVASILKG 559
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q++A+ +VL +KDY LI+GMPGTGKT+T+ V+ L G S+LLTS+T++AVDN+
Sbjct: 560 LNKPQKQAMKQVLLSKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSFTHTAVDNI 619
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQK 1030
L+KL + F+R+GR + VH +I+K
Sbjct: 620 LLKLAKFKVGFLRLGRAQKVHPDIRK 645
Score = 96.7 bits (239), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 5/109 (4%)
Query: 1240 DIGIITPYNSQANLIRH---SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
DIGII+PY Q +I L S VE++TIDKYQGRDK I+VSFVR+S N N +
Sbjct: 677 DIGIISPYRHQLKVITDLMARLKESRVEVNTIDKYQGRDKSIIIVSFVRNS-NDEN-LGA 734
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LL DW R+NVA+TRAK KLIMVG +L + P L+ L+ + ++ I N
Sbjct: 735 LLKDWRRLNVAITRAKHKLIMVGCVPSLRRYPPLEKLLCHLQSEAMIFN 783
>gi|320163176|gb|EFW40075.1| helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1606
Score = 266 bits (679), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 208/328 (63%), Gaps = 15/328 (4%)
Query: 870 SSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV 929
S A ++ E++R+DK+E+ + R NL LF+ SA + + R +IV+L AP FD SV
Sbjct: 1095 SEPAQNMNAELFRLDKEEMSVGTGLTRDNLASLFVASANARR-RALIVELAAPTFDEPSV 1153
Query: 930 -FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+ P + + +LN DQ RAI V +DYALILGMPG+GKT+T+ V+ L+ +G
Sbjct: 1154 AVAAVPTDANAAAASNLNVDQLRAIDLVQRCRDYALILGMPGSGKTTTIAELVRRLVAQG 1213
Query: 989 ASILLTSYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQ----KHCLSAMNINSVE 1042
S+LL +YT++AVDN+L+K+ + ++FVR+G + VH ++ +H A + +E
Sbjct: 1214 LSVLLCAYTHTAVDNILLKMDDTMKGVEFVRLGNSDRVHPKLAHRTAQHAPGAQTVAGIE 1273
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
++ Q VVA TCLGI +PL T ++FDVCI+DEA Q TLPV LGPL +A +FVLVGD
Sbjct: 1274 QLYT---QTPVVAATCLGINHPLFTRRRFDVCIIDEASQVTLPVCLGPLRYADRFVLVGD 1330
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
HYQL PLV++ AR+ GM SLF RLS HP A+ L+ QYRM + IM LSN LIY RL
Sbjct: 1331 HYQLTPLVRNPTARQKGMAESLFERLSNAHPAAVVYLEHQYRMNRDIMLLSNTLIYQHRL 1390
Query: 1163 SCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
CGS + A + + L P L AL
Sbjct: 1391 KCGSAAVGAASLDLPRL----PELARAL 1414
Score = 193 bits (491), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 237/542 (43%), Gaps = 115/542 (21%)
Query: 371 LVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVI--- 427
+V+ S+KN + P + G + + L ++W +T +AP N++
Sbjct: 341 VVVTTSDKN-----TTVQRPELTVFATRANDGVQCILRLRDNWIYTPVAPNHVCNLVSTA 395
Query: 428 -------GEFDDQGK---------------------CDVGRENNFLIVHPDVLVSGTRVA 459
G+F + G D + L++ PD LV+GTRVA
Sbjct: 396 PYPTDDPGDFGNDGVYRPLGGAPMGDMLSLDVHEYVIDASPASALLVLQPDCLVTGTRVA 455
Query: 460 ASFSCPRRSVLDERLKC-SERSISALL-GTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
S C RR VL+ERL+ ++ S ALL G++LH++F+ L T +F+ + VL +
Sbjct: 456 ESVFCKRRGVLNERLRGPTDYSAPALLYGSMLHELFEIALAAGTFTAEFITQQVARVLSQ 515
Query: 518 NIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ----DLNTPTVDFGSDG----LK 569
IE LY G +E L ++IP + W F S+ + + P D +
Sbjct: 516 FIEELYGVGDDEKAATVKLCDSIPAIQEWAQRFYKSEPGGAESDVPYNDAPGNAQINHTH 575
Query: 570 KLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK------------------------ 605
++ IS V DIEE +P YGLKG +DA++ V + K
Sbjct: 576 RVAISAVVDIEENLVSPAYGLKGKVDATLEVVVHRKPVLKRAASSWRPPGAAPPAPPAPP 635
Query: 606 ----RNE---INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYY 658
+ E I+P E KTGK +G S++ H QV LYTLLMS+RY K+I SGLLYY
Sbjct: 636 ASTQQTESALTTRHIVPFELKTGKA-SGTSAISHSTQVTLYTLLMSDRYEKNITSGLLYY 694
Query: 659 LQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRA--------------- 703
L+S QG+ +DL G+++ RNE A + S + P ML++
Sbjct: 695 LKSGTMQGITHTAADLRGIMIARNELA---VHLSGPRFYPEMLKSPRQCKSCFQLDNCMI 751
Query: 704 -----YGGNKECSGLG-NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSR 757
GN E +GL +F++ HL ++L+HW LI LE + ++E+W
Sbjct: 752 IHKALEHGNAESAGLDEGVFEAKTQHLNVHEIAYLQHWMELIALETGDDMATRHELWTMS 811
Query: 758 GSGGNHFTGCLSSIVL----DASNEHQKSYRDNRFVYHFVRQHMPSPNLNA---SDGDSL 810
CL S+V+ S E +R Y F R H P + A + D L
Sbjct: 812 SEARESRGRCLGSMVVVSARPVSKEPNAPWR-----YKFAR-HRSHPAIAAILSDEADDL 865
Query: 811 IG 812
G
Sbjct: 866 AG 867
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WL +A++P R V+F++TD++PA E + + L N EA ++ ++ L++ + D+G+I
Sbjct: 1496 WLLDAIDPARKVVFLDTDLVPALEVRVGEVLKNDTEASIVQQLMAALLEAGLAPNDVGVI 1555
Query: 1245 TPYNSQANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVRS 1286
+PY SQ IRH ++ VE+HT+DKYQGRDK+CI+VS VRS
Sbjct: 1556 SPYRSQLKAIRHLINSVQRGVEMHTVDKYQGRDKECIIVSLVRS 1599
>gi|118372980|ref|XP_001019684.1| hypothetical protein TTHERM_00136030 [Tetrahymena thermophila]
gi|89301451|gb|EAR99439.1| hypothetical protein TTHERM_00136030 [Tetrahymena thermophila SB210]
Length = 2532
Score = 265 bits (676), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 272/1082 (25%), Positives = 471/1082 (43%), Gaps = 188/1082 (17%)
Query: 387 AKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLI 446
K Y++L++ N+ ++R +HL+ H + V+ E V +N LI
Sbjct: 1473 GKFNYQLLKMQNQ--TDQRDIHLFFSILHQFQLCDNKERVMKE--------VFSSSNILI 1522
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDERLKCSERS-ISALLGTLLHQIFQAGL-------- 497
+ PD ++ T +A S SC R ++ + K +E + + L G +LH IFQ +
Sbjct: 1523 MEPDQMLYPTLIAQSTSCYRIPLIKMKFKVTESTNWNMLKGVILHDIFQHLMTLHSQNQQ 1582
Query: 498 MKEIPTMK---FLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKML----NWIILF 550
+KEI K FL + + + K +E L+ N K + M+ N++I
Sbjct: 1583 IKEIIKEKSDSFLTDIIKQLYTKYLEELFLLEKCINTFEKEIKYIAKNMMDFLQNYLI-- 1640
Query: 551 KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESK----R 606
+ + + T + +K+KI ++ + E + GLKG ID + ++E + +
Sbjct: 1641 -EGKLIETKYSN------RKIKIKKLVENEMVVNNEALGLKGQIDCVFKCEVEEQFSDQK 1693
Query: 607 NEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID-SGLLYYL------ 659
+ LP E KTG G+ + Q + Y LL++++Y + + G LYYL
Sbjct: 1694 EKKYECFLPFELKTG----GKKKQIYEDQNLFYCLLLNQKYDRKQNLEGFLYYLSLNDLT 1749
Query: 660 -----------------QSDQTQGVM----VQRSDLVGLIMRR-----NEFANDIIKAST 693
++ +TQG M ++R D+ + N+ +D
Sbjct: 1750 TSCPTKQSSVNLLTRRNKNMETQGKMPEINIERPDICKFCYEKEACYANQLVDDYDNIKD 1809
Query: 694 TQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLI--------DLEAKE 745
+ LP Y +K+ +DS LT +L+ W LI D++ +
Sbjct: 1810 IEDLP---EKYKIDKQFEYFHQFYDS----LTEGSKLYLKKWIDLIQMEQQCDSDIKKDK 1862
Query: 746 MQVVKNEIWCSRGSGGNHFTGCLSSIVLDA--------------------SNEHQKSYRD 785
Q + NE +F SS V SN QK Y
Sbjct: 1863 KQKLLNEADNQLIFMTENFDQFFSSQVEQLQTSGYIQSQQNLSSKDSSRDSNASQKEYE- 1921
Query: 786 NRFVYHFVRQHMPSPNLNA--------SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD 837
H + P+L+ +G+S + + D+ C ++ + E
Sbjct: 1922 -----HIIYLRKICPSLSKLIALSEFYKEGESFVLYQM---DIKCKFKA-----ILEEKT 1968
Query: 838 RLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSF-SVMR 896
+ +I ++ V+F K ++ +S + L + +KD+ +V+
Sbjct: 1969 LQEQSHSIILKLKSIQAQVNFDKK-KVEKVLNSKIGNGLYWSLESYNKDQYPDQRQNVLN 2027
Query: 897 YNLVQLFLQSAQSSQLRR-------------MIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
L +L +QS +L+ +I+D P+F + F+ + +
Sbjct: 2028 LILNKLVMQSESHQKLKEAYNLKLTNKDFTSVIIDNFPPKFQNNE-FTDEKIEEILNKYP 2086
Query: 944 SL--NDDQR-RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+L N DQ +++ + ILGMPGTGKT + H +K L + +L+TS+TNSA
Sbjct: 2087 NLLKNVDQADSSMVIYFIYESLTCILGMPGTGKTFLIAHLIKILADQKKKVLVTSFTNSA 2146
Query: 1001 VDNLLIKL-----KSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVA 1055
+DN+++KL + ++I + ++H Q+ + + + L + ++
Sbjct: 2147 LDNIIVKLLEIFPEIKNICLRKGSNKNLIHSVAQEILYNPYSFEEERQFSDYLKEKQIYF 2206
Query: 1056 VTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
T +G N L +K FD CI+DEA Q P+ LGP++ K +L+GDH+QL PLV++
Sbjct: 2207 ATIIGSNNKLFHSEKIKFDYCIIDEASQCVEPLCLGPMLICDKSILIGDHFQLQPLVKNE 2266
Query: 1114 EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
EA + G+ ISLF R+ ++P L+SQ+RM IMELSN ++Y ++L D I N K
Sbjct: 2267 EAGKQGLSISLFERMCNQYPLCQVKLKSQFRMNNKIMELSNIMVYNNQLKAFDDNIGNRK 2326
Query: 1174 IKVS--DLSSCS-PWLKEALNPCRPVIFVNTDMLPAY-----EAKDHQTLNNPVEA---- 1221
IK++ DL + L + P V+F++T +L A++ +E
Sbjct: 2327 IKINEDDLKRITNKSLNHCMQPNNEVVFIDTSLLEQSFKVEGAAEEDLVQKQSIEENRFQ 2386
Query: 1222 ----CLIAKITQELVKNEIEGKDIGIITPYNSQ-----ANLIRHSLSVSSVEIHTIDKYQ 1272
CL+ K QE+ I+ K + +ITPYN N+ + + + +E+ T+DK Q
Sbjct: 2387 IKFICLLIKKFQEV---NIQNKSMALITPYNFYRVQFLKNMNQLHIEQNDLELFTVDKSQ 2443
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKL 1332
G DKD I++ N LL +W R NVA+TR+K KLI+VG+ L++ +
Sbjct: 2444 GIDKDIIILHISDKIGNDH-----LLSNWRRTNVAITRSKMKLIIVGNQNVLNRYKTIDT 2498
Query: 1333 LI 1334
L+
Sbjct: 2499 LM 2500
Score = 209 bits (532), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 259/496 (52%), Gaps = 70/496 (14%)
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+W ++ ++ + +SV R N + ++ +L ++I+ P+F + FS+D LS +
Sbjct: 780 LWSVELND-LEYYSVQRQNTEKF---KQKNKELIKVIIGNTPPKFQNNQ-FSEDRILSIL 834
Query: 940 --WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ +N+DQ+ + GMPGTGKT +VH +K L + ++L+TSYT
Sbjct: 835 DNYPNLLINEDQQDS--------------GMPGTGKTYLIVHLIKILTNQNKTLLITSYT 880
Query: 998 NSAVDNLLIKLKSQSIDF--------VRIGRHE-VVHKEIQKHCLSAMNINSVEEIKKRL 1048
NSA+DN+++KL +D +RIG ++ +VH Q + + + ++
Sbjct: 881 NSALDNIIVKL----LDLFPELSNMSLRIGSNKNLVHSIAQGILFDPSSFTNEKHFADQM 936
Query: 1049 DQVKVVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQL 1106
K+ T +G N LL K FD CI+DEA Q P+ LGP++ +K +L+GDH QL
Sbjct: 937 KNKKIFFATIIGSNNKLLQSSKISFDYCIIDEASQCVEPLCLGPMLICNKSILIGDHQQL 996
Query: 1107 PPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS 1166
P++++ EA + G ISLF R+ ++P L++Q+RM IMELSN ++Y ++L
Sbjct: 997 QPIIKNEEAGKLGYSISLFERMCNQYPSCYIKLKNQFRMNNSIMELSNIMVYQNQLKAFD 1056
Query: 1167 DEIANAKIKVSD------LSSCSPWLKEALNPCRPVIFVNTDML--PAYEAKDHQTL-NN 1217
+ I N+ +++++ + C + L P V+F++T E D + +
Sbjct: 1057 NNIGNSLMQINEDELQKIRNKCINY---CLQPSNKVVFIDTSFYQNEIIEKDDQEIVCKQ 1113
Query: 1218 PVEA--------CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTID 1269
P+E CL+ K Q++ I+ K++ ++TPYN + +++ T+D
Sbjct: 1114 PIEENIFQVKLICLLIKRLQDI---SIQNKNMALVTPYNF------YRYQQQDLQLFTVD 1164
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
K QG+++D I++ + C LL ++ R NVALTR+K KLI+VG+ L K +
Sbjct: 1165 KSQGQERDVIILHIT----DKIGC-DHLLSNFRRTNVALTRSKMKLIIVGNKNILKKNNI 1219
Query: 1330 LKLLINKVGEQSGILN 1345
+ L+ + E++ + N
Sbjct: 1220 IDQLMTILLEKNYMDN 1235
Score = 53.5 bits (127), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 24/267 (8%)
Query: 414 FHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDER 473
F +V+ D G ++ + +V + NN LI+ PD+ + + +A S C R S++ +
Sbjct: 247 FFSVLNEEDINESNGRYETRN--EVFKNNNILILEPDINLPASLIAKSEKCYRSSLIKMK 304
Query: 474 LKCSERSISALLGT-LLHQIFQAGL----MKEI-------PTMKFLEEYARLVLQKNIES 521
K +E + LL +L +FQ + EI P +FL+ + K +E+
Sbjct: 305 FKANESASWPLLKCFMLRDLFQHLISMVSQNEIQKNTFQNPDYEFLDGLVNKIHTKYLEN 364
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEE 581
L+ + I + ++ + KML + + + D F G+K L ++E +
Sbjct: 365 LFLIDKKLDQIKEEIIFELIKMLQFFGKYFNGSDRQIYKTKFSQRGIKMLNLAEN---QM 421
Query: 582 MAWAPKYGLKGMIDASIRVKIE---SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVIL 638
G+ G ID ++E + + P E KTGK G ++L
Sbjct: 422 FVNNDILGINGYIDYVFSCEVEDYLDRSQPKQTLQFPFEVKTGKNIEGYYEQNLLYCLLL 481
Query: 639 YTLLMSERYLKHIDSGLLYYLQSDQTQ 665
L S + L+ G L+ L DQ Q
Sbjct: 482 NYKLESNQNLE----GFLFQLAEDQDQ 504
>gi|145351036|ref|XP_001419893.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580126|gb|ABO98186.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 486
Score = 264 bits (674), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 162/449 (36%), Positives = 256/449 (57%), Gaps = 18/449 (4%)
Query: 896 RYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
R N++ LF Q+ +++ +RR I+DLE P+F + ++ LND+Q A+ K
Sbjct: 6 RGNVLALFTQTERAAIIRRRIIDLERPKFAPIGDHKRKIEVALKDLGFPLNDEQLLAVEK 65
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI-D 1014
++TA+DY L+ G PG GKT+ +V AVKAL +G S+L+TS+T+SA+DN+ +L + +
Sbjct: 66 IVTAEDYVLVQGFPGAGKTAMLVAAVKALRAQGKSVLITSHTHSAIDNVFSRLPGVGVHE 125
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFD 1072
F+RIG V +Q++ L + ++ ++++K ++ VV TC + + K FD
Sbjct: 126 FMRIGDEVKVVDAVQEYRLGSKRWPCSNSDDLRKVSERAMVVGATCHAMGHAYFQRKMFD 185
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
V ++DE+GQ TLP L PL A FVLVGDH+QLPPLV+S +A G+ SL L + H
Sbjct: 186 VVLIDESGQITLPSILPPLFAAKTFVLVGDHHQLPPLVKSKQAIAGGLGRSLLAMLCDAH 245
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS---DLSSCSP-WLKE 1188
P ++ L SQYRM + + L N L Y +L CG++ +A + ++ D SC+P WL
Sbjct: 246 PDMVTKLSSQYRMAEPLTRLPNILTYDGKLRCGTESVAKQLLSLAPLKDAFSCAPQWLAH 305
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+NP +F++T L A + + N E L+ L + + ++P+N
Sbjct: 306 VMNPANHTVFLDTSALGAAARETPKPYINEAEMDLVLTTVSALTTH--GATSVCALSPFN 363
Query: 1249 SQANLIRHSLSV-------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+Q + I+ L+ + TIDK QG+D D + +SFV S++ + + LL D
Sbjct: 364 AQVDAIKARLNGFKALSGDDAPRALTIDKAQGQDMDAVCISFVCSNDEAK--VNVLLNDT 421
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
R NVA+TRAKKKLI++G+ TL P+L
Sbjct: 422 SRFNVAITRAKKKLILIGNAETLRSSPVL 450
>gi|298245528|ref|ZP_06969334.1| DNA replication factor Dna2 [Ktedonobacter racemifer DSM 44963]
gi|297553009|gb|EFH86874.1| DNA replication factor Dna2 [Ktedonobacter racemifer DSM 44963]
Length = 1067
Score = 263 bits (673), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 283/1035 (27%), Positives = 445/1035 (42%), Gaps = 195/1035 (18%)
Query: 414 FHTVIAPGDTVNVIGEFDDQGK-CDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDE 472
+H AP + F D+ + C G ++ PD L++ T + + C R+ +L +
Sbjct: 95 YHLPFAPTELT-----FRDRSRSCYRGNSYTLAVLEPDTLLNITDLNQAEYCQRQHLL-Q 148
Query: 473 RLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFL-----------EEYARLVLQKNIE- 520
RL S + + + G ++H F+ L+KE KFL E A + LQ+++E
Sbjct: 149 RLIPSPANAATIRGNIVHHCFKE-LLKEHDRGKFLLRKADEEEKQAPETAYVSLQRHLEQ 207
Query: 521 -------SLYACGVNENDIHKTLVEAIPKMLNWIILFKDS-QDLNTPTVDFGSDGLKKLK 572
+ G+N + + + + + W +++ D+ T +
Sbjct: 208 ALQLHNIEMALAGINPEAMRQEVQPHLESLARWFEHERNTLWDMPTALQETHETQADPDT 267
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
E AP+ GL+G +D R ++ R + LE KTG EH
Sbjct: 268 APNQVRAETFLLAPEIGLRGRLDLFWR---QAGRQRL------LELKTGGAKGELPRKEH 318
Query: 633 RAQVILY-TLLMSER--YLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDII 689
R QV Y +LLM R +K + LLY Q + S + I R NE N ++
Sbjct: 319 RWQVYGYHSLLMVRRDSQMKKALATLLYSGTPQHAQAFGIPAS--IREIQRVNERRNTLV 376
Query: 690 KASTT-----------------------------QQLPPMLRAYGGNKECSGLGNMFDSH 720
+ T QLP + A+ + G + D
Sbjct: 377 LSLATGIPTTPPGPSRCNRCSLQSQCYQLSSLLDWQLPTIDAAFQNGQGEVGGPDTQDRR 436
Query: 721 IYHLTTAH-CSFLRHWDRLIDLEAKEMQVVKNEIWCS----RGSGGNHFTGCLSSIVLDA 775
+H T +F H+ L+ LE + + + +W + R G G + +
Sbjct: 437 PWHFNTQEDKAFFAHYYHLLQLEGRAGEEQQARLWNTPIEERLKQGTAIQGLQALGPANI 496
Query: 776 SNE-HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILST 834
+N+ Q+S+ N S+ LR GD ++LS+
Sbjct: 497 ANDGWQQSFSCE----------------NTSE-----------------LREGDEILLSS 523
Query: 835 -ESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFS 893
+ R V SG I +IS V+V + + P D D L+H + T +
Sbjct: 524 GDPIRGEVVSGTILQISSQAVTVWTRELIDHPALLDRYDND-LVH---------VRTLQN 573
Query: 894 VMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAI 953
+MR+ V LR ++ PRF V + N +Q A+
Sbjct: 574 LMRWLQV--------DPHLRDLVAGKVRPRFKQQQVHPR----------ADFNAEQNLAV 615
Query: 954 IKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI 1013
+ L +DY L+ G PGTGKTS + VK L +G +LL ++TN AVDN+L++L+ +
Sbjct: 616 ERALQMQDYLLVHGPPGTGKTSVIAEIVKRLTQQGQRVLLAAFTNQAVDNILLRLEREGF 675
Query: 1014 D-FVRIGRHEVVHKEIQKHCLSAMNINSV--EEIKKRLDQVKVVAVTCLGITNP------ 1064
D ++R+G V + ++ H L + S E + L + V+A T ++
Sbjct: 676 DTYLRLGHERSVAEGVRPHLLKGLVDESPHPEAVHDLLHSMPVIASTTATWSSDKYMPFH 735
Query: 1065 LLTDKK---------FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
+LT + FDV I+DEAGQ T+P LG L FA +F+LVGD QLPPLV + EA
Sbjct: 736 MLTSENVARKQSGLDFDVAIIDEAGQLTVPAILGALRFAHRFILVGDEKQLPPLVLNPEA 795
Query: 1116 RENGMEISLF---RRLSEEHPQ----AISA---LQSQYRMCQGIMELSNALIYGDRLSCG 1165
G+ SLF +R +++ Q AISA L++QYRM + I S+ + Y +RL
Sbjct: 796 ATQGLSDSLFSHLKRFDDDYMQNQAVAISACVPLRTQYRMNKWISNFSSTVFY-ERLLLA 854
Query: 1166 SDEIANAKIKVSDLSSC---SPWLKEALNPCRPVIFVNTDMLPA----YE----AKDHQT 1214
IA K+ + LS + + E L P RP+ F+++ L A YE A + +T
Sbjct: 855 HPSIAERKLDFTSLSPTRQETTAITEVLRPGRPLAFLDSSPLQAEANTYEAGPGASESKT 914
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-------------SVS 1261
N EA ++ I EL+K I KDIGII P+ +Q IR L + S
Sbjct: 915 SN--AEARVVRDIVAELLKRGITPKDIGIIAPFRAQVATIRRHLFSGDPASGWEGLPTSS 972
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT-SSLLGDWHRINVALTRAKKKLIMVGS 1320
+ + T+D++QG ++ I++SF S E P L + HR+NVALTRA++KLI+VG
Sbjct: 973 LLSVDTVDRFQGGERMVIIMSFATSQEPPAGSQRRDFLTNPHRLNVALTRAQRKLILVGC 1032
Query: 1321 CRTLSKVPLLKLLIN 1335
L +PL LI
Sbjct: 1033 VPALEPLPLFSRLIT 1047
>gi|256072084|ref|XP_002572367.1| DNA replication helicase [Schistosoma mansoni]
Length = 1399
Score = 262 bits (669), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 276/1018 (27%), Positives = 459/1018 (45%), Gaps = 201/1018 (19%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVL------------DERLKC-------SERSISALL 485
+ ++PD L+ T+V +S +C RR VL D + + +S L
Sbjct: 364 ICLNPDYLLPTTKVVSSLNCLRRVVLEYFWVTDGGYREDNEINVINSNQIYNSQSDVMLT 423
Query: 486 GTLLHQIFQAGLMK-EIPTMKFLEEYARLVLQKNIE-SLYACGVNENDIHKTLVEAIPKM 543
G+L+H++FQ + + I L+ + L+ + ++ +YA G+ + L E +PK+
Sbjct: 424 GSLVHELFQKIISRPNIQRDDALQIVSGLIYRPSVVLQMYASGIEPKTLFAKLEEFVPKI 483
Query: 544 LNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE 603
+W + + G + ++K+ +V IEE W+ + GLKG ID+++ +I
Sbjct: 484 FDW----TQTHCIQHLPSRNGVTTVNQVKVEDVIAIEENIWSNRLGLKGKIDSTLLCEIP 539
Query: 604 ---SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHI--------- 651
+ +N ++P+E KTG N S+EH+ QV LY +L E Y +
Sbjct: 540 LIGELKPTLN--LIPMELKTG---NPTYSIEHKGQVYLYLMLAREFYGAYYSTSKYAKVP 594
Query: 652 --DSGLLYYLQSDQTQGVMVQRS------------DLVGLIMRRNEFANDII----KAST 693
++G L YL+ Q S GLI RN + II A T
Sbjct: 595 VANAGWLVYLKEPIKQNFQKHISFTNPGILYPDINSFRGLIQTRNRLVSGIIDLLRSADT 654
Query: 694 TQ---------------------------QLPPMLRAYGGNKECSGLGNMFDS------- 719
+ QL L A K SG + F S
Sbjct: 655 SHEQLCVNEPKLKLPDCINQLRVCQTCSLQLTCSLFAENPAKPYSGAYDSFSSVHKILIN 714
Query: 720 HIYHLTTAHCSFLRHWDRLI---DLEAKEMQVVKNEIWCSRGSGGNHFT-GCLSSIVLDA 775
H HL H F W +L+ L+ + + V I+ + T G + + L
Sbjct: 715 HRSHLQQEHIDFFIKWSKLLLTEYLDNERFEHVIGNIYKTSLKVDKPITNGTIRGLRLVK 774
Query: 776 SNEHQKSYRDNRFV--YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
+ Q S V + + + + P +SL+ + +L GD+VI+S
Sbjct: 775 TKISQSSLSGESEVQSWFILHKSIDQP------YESLLSFS--------SLNIGDFVIVS 820
Query: 834 TESDR-LAVASGLITEISRFHVSVSFSK-----PLRLPGRN------SSSDADSLLHEVW 881
++ R + + I + FH V F+ PL +N + S D + +++
Sbjct: 821 SDDSRFMGIELATIAPVEGFH-EVDFTSHGSVSPLSDYKKNVLSLISTRSFPDRI--QLF 877
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
R+D+ M + + NLV L S LR +I+D P D S+
Sbjct: 878 RVDRYVSMKTIQLNLSNLVSLMRSSKLCHLLRELIIDGRIP--DMLKTISKKIVKEIRPI 935
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
K LN +QR AI++ L ++ Y LI G PG+GKT T++ ++ L++ IL+T++T+SAV
Sbjct: 936 LKPLNSNQRAAILQTLFSQSYILIKGYPGSGKTETLIALLRVLILLKKRILVTAHTHSAV 995
Query: 1002 DNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLS-AMN--INSVEEIK--------KRLD 1049
DNLL++L ++ +R+G+ + + ++ + +N + S E+ K +
Sbjct: 996 DNLLLRLCQTGETRVIRLGQMDRILPDLLNYSFEYKLNTFLKSNEKPKNNIIDYINNIMA 1055
Query: 1050 QVKVVAVTCLG------ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS-------- 1095
VV T L + + LT +KFDV ++DEA Q P +LGPL+ +
Sbjct: 1056 DAVVVGCTALSASGGNDLRHSALTYQKFDVVLIDEASQLMFPTTLGPLLCLAEEQQPLDS 1115
Query: 1096 ----KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ----------------- 1134
+FVLVGD YQLPPLV+S +AR G++ SLF L H +
Sbjct: 1116 IKCCRFVLVGDPYQLPPLVRSQKARLGGLDQSLFSLLQSHHDRDNSPLTTNSSMDLSKKG 1175
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS------DLSSCSP-WLK 1187
++ L QYRM IM LSN L Y +++SC + I+ A +K++ ++S P W+K
Sbjct: 1176 YVTELTIQYRMNSKIMALSNHLNYKNKMSCANSCISQATLKLNPNITSDEISDKLPLWIK 1235
Query: 1188 EALNPC--RPVIFVNTDMLP--AYEAKDHQTLN-NPVEACLIAKITQELVK-NEIEGKDI 1241
+P V+ ++T ML ++ A + +T N NP EA LI I +++ + +DI
Sbjct: 1236 RVNSPLISDSVLLLDTKMLDCCSFSANESRTSNSNPTEAQLILYIIKQIHHVFLLSMEDI 1295
Query: 1242 GIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILV-------SFVRSSEN 1289
G+ITPY +Q L+++ + S ++E++T+D++QGRDK IL+ SF+R+SEN
Sbjct: 1296 GVITPYRAQVYLLKNMMKENSFGTIEVNTVDQFQGRDKKLILLSLTNCPSSFLRTSEN 1353
>gi|353231852|emb|CCD79207.1| putative dna replication helicase dna2 [Schistosoma mansoni]
Length = 1375
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 276/1018 (27%), Positives = 459/1018 (45%), Gaps = 201/1018 (19%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVL------------DERLKC-------SERSISALL 485
+ ++PD L+ T+V +S +C RR VL D + + +S L
Sbjct: 364 ICLNPDYLLPTTKVVSSLNCLRRVVLEYFWVTDGGYREDNEINVINSNQIYNSQSDVMLT 423
Query: 486 GTLLHQIFQAGLMK-EIPTMKFLEEYARLVLQKNIE-SLYACGVNENDIHKTLVEAIPKM 543
G+L+H++FQ + + I L+ + L+ + ++ +YA G+ + L E +PK+
Sbjct: 424 GSLVHELFQKIISRPNIQRDDALQIVSGLIYRPSVVLQMYASGIEPKTLFAKLEEFVPKI 483
Query: 544 LNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE 603
+W + + G + ++K+ +V IEE W+ + GLKG ID+++ +I
Sbjct: 484 FDW----TQTHCIQHLPSRNGVTTVNQVKVEDVIAIEENIWSNRLGLKGKIDSTLLCEIP 539
Query: 604 ---SKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHI--------- 651
+ +N ++P+E KTG N S+EH+ QV LY +L E Y +
Sbjct: 540 LIGELKPTLN--LIPMELKTG---NPTYSIEHKGQVYLYLMLAREFYGAYYSTSKYAKVP 594
Query: 652 --DSGLLYYLQSDQTQGVMVQRS------------DLVGLIMRRNEFANDII----KAST 693
++G L YL+ Q S GLI RN + II A T
Sbjct: 595 VANAGWLVYLKEPIKQNFQKHISFTNPGILYPDINSFRGLIQTRNRLVSGIIDLLRSADT 654
Query: 694 TQ---------------------------QLPPMLRAYGGNKECSGLGNMFDS------- 719
+ QL L A K SG + F S
Sbjct: 655 SHEQLCVNEPKLKLPDCINQLRVCQTCSLQLTCSLFAENPAKPYSGAYDSFSSVHKILIN 714
Query: 720 HIYHLTTAHCSFLRHWDRLI---DLEAKEMQVVKNEIWCSRGSGGNHFT-GCLSSIVLDA 775
H HL H F W +L+ L+ + + V I+ + T G + + L
Sbjct: 715 HRSHLQQEHIDFFIKWSKLLLTEYLDNERFEHVIGNIYKTSLKVDKPITNGTIRGLRLVK 774
Query: 776 SNEHQKSYRDNRFV--YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILS 833
+ Q S V + + + + P +SL+ + +L GD+VI+S
Sbjct: 775 TKISQSSLSGESEVQSWFILHKSIDQP------YESLLSFS--------SLNIGDFVIVS 820
Query: 834 TESDR-LAVASGLITEISRFHVSVSFSK-----PLRLPGRN------SSSDADSLLHEVW 881
++ R + + I + FH V F+ PL +N + S D + +++
Sbjct: 821 SDDSRFMGIELATIAPVEGFH-EVDFTSHGSVSPLSDYKKNVLSLISTRSFPDRI--QLF 877
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
R+D+ M + + NLV L S LR +I+D P D S+
Sbjct: 878 RVDRYVSMKTIQLNLSNLVSLMRSSKLCHLLRELIIDGRIP--DMLKTISKKIVKEIRPI 935
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
K LN +QR AI++ L ++ Y LI G PG+GKT T++ ++ L++ IL+T++T+SAV
Sbjct: 936 LKPLNSNQRAAILQTLFSQSYILIKGYPGSGKTETLIALLRVLILLKKRILVTAHTHSAV 995
Query: 1002 DNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLS-AMN--INSVEEIK--------KRLD 1049
DNLL++L ++ +R+G+ + + ++ + +N + S E+ K +
Sbjct: 996 DNLLLRLCQTGETRVIRLGQMDRILPDLLNYSFEYKLNTFLKSNEKPKNNIIDYINNIMA 1055
Query: 1050 QVKVVAVTCLG------ITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS-------- 1095
VV T L + + LT +KFDV ++DEA Q P +LGPL+ +
Sbjct: 1056 DAVVVGCTALSASGGNDLRHSALTYQKFDVVLIDEASQLMFPTTLGPLLCLAEEQQPLDS 1115
Query: 1096 ----KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ----------------- 1134
+FVLVGD YQLPPLV+S +AR G++ SLF L H +
Sbjct: 1116 IKCCRFVLVGDPYQLPPLVRSQKARLGGLDQSLFSLLQSHHDRDNSPLTTNSSMDLSKKG 1175
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS------DLSSCSP-WLK 1187
++ L QYRM IM LSN L Y +++SC + I+ A +K++ ++S P W+K
Sbjct: 1176 YVTELTIQYRMNSKIMALSNHLNYKNKMSCANSCISQATLKLNPNITSDEISDKLPLWIK 1235
Query: 1188 EALNPC--RPVIFVNTDMLP--AYEAKDHQTLN-NPVEACLIAKITQELVK-NEIEGKDI 1241
+P V+ ++T ML ++ A + +T N NP EA LI I +++ + +DI
Sbjct: 1236 RVNSPLISDSVLLLDTKMLDCCSFSANESRTSNSNPTEAQLILYIIKQIHHVFLLSMEDI 1295
Query: 1242 GIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILV-------SFVRSSEN 1289
G+ITPY +Q L+++ + S ++E++T+D++QGRDK IL+ SF+R+SEN
Sbjct: 1296 GVITPYRAQVYLLKNMMKENSFGTIEVNTVDQFQGRDKKLILLSLTNCPSSFLRTSEN 1353
>gi|409083838|gb|EKM84195.1| hypothetical protein AGABI1DRAFT_104147 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1333
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 215/778 (27%), Positives = 365/778 (46%), Gaps = 114/778 (14%)
Query: 385 VDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCD------- 437
V S KVL + + GE+R V L +DW + + GD +N+IG F+
Sbjct: 346 VSGDSLQKVLAVKTDPGGEKRTVILRDDWIMSDVCNGDVINIIGAFETVSPTSSSSITCT 405
Query: 438 --VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTLLHQIFQ 494
+ ++N+LI HPD+LV+ T +A + C R+ +L ++ + AL+ G +LH++ +
Sbjct: 406 AYITSKSNYLIRHPDILVTATTLANAAQCRRKPILAGLVRSTSDITPALVWGNILHEVME 465
Query: 495 AGLMKEIPTMKFLEEYARLVLQKNIESLYACGVN-ENDIHKTLVEA---IPKMLNWIILF 550
L + ++E ++KN+ S+ ++ E H+ V A + ++
Sbjct: 466 LCLQENCWDQAWIERKIDEFVRKNLVSVMRIEMSVEQASHEVKVRASGLLAFARKYMGSK 525
Query: 551 KDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKR---N 607
S+ + T T D L I+++ D EE W+P YGLKG IDA++ I + +
Sbjct: 526 PKSEGVLTDTRSNPGDPESLLAITDLLDAEEDIWSPTYGLKGKIDATVHSIISQPKPPPH 585
Query: 608 EINGMI------------LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGL 655
+IN + +P E KTG+ G +EHRAQ +LY LL++ERY + +D GL
Sbjct: 586 QINHYLSKSTGTDVISGAMPFEIKTGRTVAG---VEHRAQTMLYALLVAERYHQEVDGGL 642
Query: 656 LYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIKASTTQQ------------LPPMLRA 703
LYY Q ++ V V R++L GLIM RN+ A + + S + LPP +
Sbjct: 643 LYYTQKEEVVRVPVVRNELKGLIMGRNDIAGYMKRRSDQARGESETDIEDEPFLPPTIDD 702
Query: 704 YGGNKEC--------------------SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEA 743
K C S + + ++ HLT F + W++LI LE
Sbjct: 703 ERVCKRCYALDTCLLYRKAVEGVVDTSSPIASTYELKTSHLTPQQLDFFKKWEKLISLEE 762
Query: 744 KEMQVVKNEIWC----SRGSGGNHFTGCLSSIVLDASN------EHQKSYRDN------- 786
+++ K E+W R G F G + + D + + ++ DN
Sbjct: 763 RDINRFKKELWTMGAKEREKKGRCFAGLVMDVGFDPAAFRLGGVGYDENGVDNTDADRLN 822
Query: 787 -------RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL 839
+F Y F R L + + G+ + +S E D L
Sbjct: 823 LGKDKIHKFTYRFTRSSNTEDWAQEGSAQGLANGEERESLLKGHMSIGEPITISVEPDLL 882
Query: 840 AVASGLITEISRFHVSVSFSKPL---RLPGRNSSSDADSLLHE--VWRIDKDEIMTSFSV 894
A+A G I +++ V+V L R+ R ++ D+ H+ V+R+DKD++ +
Sbjct: 883 ALARGFIVDLTPRMVTVGVDHKLDLERIRWRLATRHLDTHGHDHIVFRVDKDDLFGGMAR 942
Query: 895 MRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDS----GSVFSQDPALSYIWSEKSLNDDQR 950
+R NL QLF + +L +++VDL+ P F+ G +S+D + + LN +Q+
Sbjct: 943 IRDNLAQLFYAEGDAMRL-KLVVDLQKPEFEKLHWIGDRYSRD-WQGFEKHTQKLNLNQK 1000
Query: 951 RAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKS 1010
A+ KVL+A+DYA+ILGMPGTGKT + VK L+ G S+L ++N+L++LKS
Sbjct: 1001 EAVKKVLSAQDYAIILGMPGTGKTGVIASLVKVLVSMGKSVL--------INNVLLRLKS 1052
Query: 1011 QS------IDFVRIGRHEVVHKEIQKHCLSAM-NINSVEEIKKRLDQVKVVAVTCLGI 1061
++ +R+G + +H ++Q+ L+ +VE+++ +L +VA TCL +
Sbjct: 1053 EAGKEGLGFGLLRLGNLDKIHPDVQEFTLAKRKQATTVEQLQTQLMSPPLVATTCLSV 1110
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 83/132 (62%), Gaps = 3/132 (2%)
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-SSVEIHTIDKYQG 1273
+ N VEA L+ ++T+ L+ + +++GIIT Y Q LI H L VEI T D+ QG
Sbjct: 1117 IQNEVEAELVTQVTKALIMGGVSPEEVGIITLYRQQLKLISHLLGERKDVEILTADRSQG 1176
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
RDK+ ++ S VRS+++ R T L+ DW R+NV+ TRA+ KLI+ GS RTL PLLK
Sbjct: 1177 RDKEVVIFSMVRSNDDGR--TGDLIKDWRRMNVSFTRARSKLIIFGSRRTLETTPLLKEF 1234
Query: 1334 INKVGEQSGILN 1345
+ E++ +LN
Sbjct: 1235 FYLMDEKAWVLN 1246
>gi|297301267|ref|XP_002808547.1| PREDICTED: LOW QUALITY PROTEIN: DNA2-like helicase-like [Macaca
mulatta]
Length = 975
Score = 253 bits (646), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 141/308 (45%), Positives = 186/308 (60%), Gaps = 18/308 (5%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
+VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 652 IVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLN 711
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EAR GM SLF+RL E+ A+ L QYRM IM LSN L Y +L CGSD++ANA
Sbjct: 712 REARALGMSESLFKRL-EQSKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANA 770
Query: 1173 KIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
I + S +PWL P PV F+NTD +PA E + ++N E
Sbjct: 771 VINLPHFKDVKLDLEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITE 830
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---VEIHTIDKYQGRDKD 1277
A +I +T +K DIGII PY Q +I L+ SS VE++T+DKYQGRDK
Sbjct: 831 AKVIVFLTSIFIKAGCSPSDIGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKS 890
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+LVSFVRS N LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N +
Sbjct: 891 IVLVSFVRS--NKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHL 948
Query: 1338 GEQSGILN 1345
+ I++
Sbjct: 949 NSEKLIID 956
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 234/493 (47%), Gaps = 76/493 (15%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + ++ +LI++PD+L+SGT +A+S C RR+
Sbjct: 167 LRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPDILISGTSIASSIRCMRRA 225
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 226 VLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLKEMYRL 284
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISEVT 577
+++++I + + + +P W F S D + SD K +++ +
Sbjct: 285 NLSQDEIKQEVEDYLPSFCKWAGDFMHKNASTDFPQMQLSLPSDSSKDNSTCNIEVVKSM 344
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+
Sbjct: 345 DIEESIWSPRFGLKGKIDVTVGVKIH-RGCKTKYKIMPLELKTGKESN---SIEHRSQVV 400
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++T
Sbjct: 401 LYTLLSQERRADP-EAGLLLYLKTGQMYPVSANHLDKRELLKLRNQMAFSLFHRISKSAT 459
Query: 694 TQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
Q+ LP ++ K CS +GN + HL
Sbjct: 460 RQKTQLASLPQIIEEEKTCKYCSQMGNCALYSRAVEQQMDGSSVPIVMLPKIEEETQHLK 519
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H + W ++ LE++ KN IW S C+ ++ EH K+
Sbjct: 520 QTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGHLI---RTEHVKTI 576
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVA 842
D +++++F R+H AIP + L +GD VI+S E L A++
Sbjct: 577 CDGQYLHNFQRKH----------------GAIPVTN----LLAGDRVIVSGEERSLFALS 616
Query: 843 SGLITEISRFHVS 855
G + EI+ V+
Sbjct: 617 RGYVKEINTTTVT 629
>gi|355562558|gb|EHH19152.1| hypothetical protein EGK_19800, partial [Macaca mulatta]
gi|355782889|gb|EHH64810.1| hypothetical protein EGM_18123, partial [Macaca fascicularis]
Length = 318
Score = 251 bits (641), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/306 (45%), Positives = 183/306 (59%), Gaps = 18/306 (5%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
+VA TC+GI +P+ + K FD CI+DEA Q + P+ LGPL F+ +FVLVGDH QLPPLV +
Sbjct: 2 IVATTCMGINHPIFSRKIFDFCIVDEASQISQPICLGPLFFSRRFVLVGDHQQLPPLVLN 61
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EAR GM SLF+RL E+ A+ L QYRM IM LSN L Y +L CGSD++ANA
Sbjct: 62 REARALGMSESLFKRL-EQSKNAVVQLTVQYRMNSKIMSLSNKLTYEGKLECGSDKVANA 120
Query: 1173 KIKVSDLS------------SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
I + S +PWL P PV F+NTD +PA E + ++N E
Sbjct: 121 VINLPHFKDVKLDLEFYADYSDNPWLMGVFEPNNPVCFLNTDKVPAPEQVEKGGVSNITE 180
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKD 1277
A +I +T +K DIGII PY Q +I L S+ VE++T+DKYQGRDK
Sbjct: 181 AKVIVFLTSIFIKAGCSPSDIGIIAPYRQQLKIINDLLAHSSIGMVEVNTVDKYQGRDKS 240
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+LVSFVRS N LL DW R+NVA+TRAK KLI++G +L+ P L+ L+N +
Sbjct: 241 IVLVSFVRS--NKDGTVGELLKDWRRLNVAITRAKHKLILLGCVPSLNCYPPLEKLLNHL 298
Query: 1338 GEQSGI 1343
+ I
Sbjct: 299 NSEKLI 304
>gi|403363527|gb|EJY81511.1| DNA replication ATP-dependent helicase Dna2 [Oxytricha trifallax]
Length = 1196
Score = 242 bits (618), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 157/485 (32%), Positives = 256/485 (52%), Gaps = 30/485 (6%)
Query: 881 WRIDKDEIMT-SFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
W I+ + T F++MR+NL L + S ++ + R +I+ P F S F + +
Sbjct: 638 WWIEIENFQTFQFNIMRHNLQNLCV-SPENQKFRELIIQQRKPEFKPESDFDKFKEENMD 696
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGK---TSTMVHAVKALLMRGASILLTSY 996
E LND+Q +AI K A DY +I+G+P +GK S M+ K L ILL
Sbjct: 697 ILE-GLNDEQIKAITKSYCALDYQMIIGVPASGKHEIVSRMLLVAKRL---KKKILLMGM 752
Query: 997 TNSAVDNLLIKLKS--------QSIDFVRI-GRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
N+ +DN+L++L + F+R+ + ++ ++++ +S+EE++K
Sbjct: 753 NNTTIDNVLLRLLELQEKYPHIEKAKFIRVCSNYSQINHNLKEYINPCTQFSSMEELQKF 812
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
+D + + + + N KFD CI+DEA T P+S+GP++ A KFV++GD+Y L
Sbjct: 813 IDTTDIFCASTMSVFNMFFACIKFDYCILDEASLITEPLSIGPILMADKFVMIGDYYILN 872
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P V++ EA + GM ISLFR+L E+HP L+ QYRMC I L N++ Y + S
Sbjct: 873 PYVKNHEAEKRGMSISLFRKLCEKHPYETVILKKQYRMCDNICSLINSIAYKGLIKHSSP 932
Query: 1168 EIANAKIKVSD----LSSCSPWLKEALNPCRPVIFVNTDML--PAYEAKDHQTLN-NPVE 1220
I + + L++ PWLKE P R V+F+NTD L A + + +Q N N E
Sbjct: 933 GIQEGMLTFNPEFDILTNQLPWLKELKVPDRKVVFINTDNLLNKALQKQLNQMKNRNFYE 992
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCIL 1280
+ +I I + + + I K++ IITP+ Q LI+ L V++ +DK QG K+ I+
Sbjct: 993 SAIIHAIVENFIGSGISRKNMAIITPFLDQQVLIQKQLQNFKVKVFNLDKIQGLQKEIII 1052
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+S V+ N S+L D R+ ++ T AK KLI+VGS + KV + + + + +
Sbjct: 1053 ISCVQ-----HNRKQSILKDIKRLYLSFTHAKTKLIIVGSMSNVEKVKPMDMFLGYIRSK 1107
Query: 1341 SGILN 1345
+ L+
Sbjct: 1108 NWYLD 1112
Score = 116 bits (291), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 184/416 (44%), Gaps = 77/416 (18%)
Query: 313 QVKDAISVDASVSSDKEAYLSKSQDKNGAGMLLEANSVVNGVPTDPPENVNGTSSCHFLV 372
Q+ DA S D + L K +DK G LE NG+ F+V
Sbjct: 115 QIFDAFSSDNNSQEAINISL-KIKDKQKRGEDLENKIFENGL---------------FVV 158
Query: 373 LEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVH----LWEDWFHTVIAPGDTVNVIG 428
+VS + P + +L Q + ++ L W T I GD V +IG
Sbjct: 159 FDVS-----------REPLGTVLILKSQDDDNVPINFRITLRGTWVRTPIDHGDIVRIIG 207
Query: 429 EFDDQGKCDVGRENN---------FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS-- 477
+F Q + ++N +LI+ P +L+ T + +SF C RRS+ ++ + +
Sbjct: 208 QFKRQNNYTLTLDDNESDPESSAQYLILEPFILIPTTSIVSSFPCVRRSIFADQFRTNLG 267
Query: 478 ERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLV 537
+ ++G ++H+ F+ ++++ +FLE+ + L+ +I LY E+ + L
Sbjct: 268 DYEYPLVIGNIIHEAFEKIILRQQFEEEFLEQAYKESLRNHICFLYKLKEPESKAYADLK 327
Query: 538 EAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDAS 597
+A + NW+ S L+ +F S +G+KG IDA+
Sbjct: 328 KAARNIQNWV-----SNMLDPTEQEFNS--------------------FIFGIKGKIDAT 362
Query: 598 IRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
+ VK + R+ I LE KTGK + H+ QV+LY+LL++ER++ H +S LL
Sbjct: 363 VVVK--NSRDPDLEKITALELKTGK-----EQVYHKGQVLLYSLLLTERFINHNNSNLLL 415
Query: 658 YLQSD-QTQGVMVQRSDLVGLIMRRNEFA--NDIIKASTTQQLPPMLRAYGGNKEC 710
YL S +T + R++L LI RRNE A I + LPP+L K C
Sbjct: 416 YLMSKAKTYYINTIRNELCILIQRRNELAKLQKINGEGKSYALPPILVDQDVCKNC 471
>gi|298704766|emb|CBJ28362.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 679
Score = 242 bits (617), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 160/235 (68%), Gaps = 7/235 (2%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+DQR A+ K++TAKDYAL+LGMPGTGKT T+ AV+ LL RGAS+L+TSYT+SAVDN
Sbjct: 5 ALNEDQRDAVRKLVTAKDYALLLGMPGTGKTWTIAFAVRVLLARGASVLVTSYTHSAVDN 64
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCL----SAMNINSVEEIKKRLDQVKVVAVTCL 1059
LL+KL + + +R+G+ VH ++ HC+ SA + E+ + +VV TCL
Sbjct: 65 LLLKLIEEGVPCLRVGKPSSVHPGVRPHCVNYDGSAETTAAYSEL---VASARVVGCTCL 121
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G+ +PL + ++F+ C++DEAGQ + PV L PL A FVLVGDHYQLPPLV S+EA E G
Sbjct: 122 GVKHPLFSHRRFEYCVVDEAGQISQPVVLAPLRCADVFVLVGDHYQLPPLVTSSEALEAG 181
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
M SLFRRL E HP ++ L QYRM +M L N L Y RL CG+ + ++
Sbjct: 182 MSESLFRRLCEAHPASLQRLSYQYRMNGDVMALCNDLTYSGRLRCGNATVGAQRL 236
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 41/193 (21%)
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLP---------------------------------- 1205
+ +PWL E L+P R V F++TD +
Sbjct: 345 AGLTPWLSEVLHPDRRVAFLDTDAISPDDGEAVEAGRGAGGGGWGGGVGRPPFAGLEVRS 404
Query: 1206 ---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
A E + TL N VE ++ + L + +G+I+PY SQ L++ L S
Sbjct: 405 VAEAGEQRGRGTLVNAVECDVVRLLAWGLGVAGFDLGGVGVISPYRSQVQLLQAELKPSF 464
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
++E++TIDKYQGRDK I+VSFVRS N LL DW R+NVAL+RAK KL++VGS
Sbjct: 465 PALEVNTIDKYQGRDKKVIVVSFVRS--NAEGTVGHLLRDWRRLNVALSRAKHKLLLVGS 522
Query: 1321 CRTLSKVPLLKLL 1333
RTLS +L L
Sbjct: 523 LRTLSSCAVLNSL 535
>gi|300122655|emb|CBK23222.2| unnamed protein product [Blastocystis hominis]
Length = 422
Score = 241 bits (614), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 221/395 (55%), Gaps = 10/395 (2%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K N +Q++AI+ + D A++ G PGTGKT+ + V ++ S+ LTS+T++A+D
Sbjct: 26 KQCNAEQQQAILMCFNSNDIAILRGYPGTGKTTVISVIVILCVLLRKSVFLTSHTHTAID 85
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
N+L+KL + +R+G +H + ++ +S + + +VA T
Sbjct: 86 NILLKLLQHDLPILRLGDIAKIHPQTTRYHISNQWSGDFGTYQSIYESKSIVAATVYTNL 145
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
K FD+CI+DEAGQ P L + + + LVGD QLPP+VQ+ A + G +I
Sbjct: 146 QQFPRGKVFDLCIVDEAGQIPEPSILQAFLLSKQVFLVGDSKQLPPIVQNPLAAKFGFDI 205
Query: 1123 SLFRRLSE---EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
SL RL + E + I L +QYRM + IM L N L+Y + L S+ IANA + V
Sbjct: 206 SLMARLEQSGSEDSKWIGKLYTQYRMNEPIMNLVNHLVYDNTLRAASESIANAFLPVRID 265
Query: 1180 SSCSPWLKEALNPCRPVIFVNTD-MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S+ W++ L+P V+F++TD K+ Q +N + L A+I EL+K G
Sbjct: 266 SNAPMWIQTVLSPANGVVFISTDSQSKERNEKEIQEEDNRRSSMLEARIVSELIKYITSG 325
Query: 1239 ----KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
+ IGII+PYN+Q I+ + S+EI T+D +QGR+K+CI++S VR+ N +
Sbjct: 326 GVSSESIGIISPYNAQVAYIQSVIGDKSIEISTVDSFQGREKECIIISLVRN--NRKQKI 383
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
+LL DW RINVA +RA +KLI++GS TL P+
Sbjct: 384 GTLLKDWRRINVAFSRATRKLIIIGSEITLCAEPI 418
>gi|340371665|ref|XP_003384365.1| PREDICTED: DNA2-like helicase-like [Amphimedon queenslandica]
Length = 1213
Score = 240 bits (613), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 182/692 (26%), Positives = 325/692 (46%), Gaps = 141/692 (20%)
Query: 408 HLWEDWFHTVIAPGDTVNVIGEF-------------------DDQGKCDVGRENNFLIVH 448
+L +DW + I GD ++++ +D G C +I++
Sbjct: 338 YLRDDWVQSDIRVGDIIHIVSSCSTLSGAGSLAHSKDYFVISNDNGAC--------IIIN 389
Query: 449 PDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLE 508
PD L+S T ++ +C RR +L++ K S ++ L+G LLH++FQ ++ + +
Sbjct: 390 PDYLISVTSLSNGITCTRRPILEDLFKVSGQTEGMLVGKLLHEMFQKAVLTASEDVSIVT 449
Query: 509 EYARLVL-------QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
L L ++ LY G+ + DI ++L E + ++ W Q++N +
Sbjct: 450 RDRVLSLIPLLVNNASVLQELYVLGLTDGDIIESLTEHVDLIVAWC---HQHQNVNYMSY 506
Query: 562 DFGSDGLKK------------LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEI 609
++ K+ L I+ VTDIEE W+P++GLKG +DA++++K+ +
Sbjct: 507 NYSKIEWKRFPHSQTETEMANLCITGVTDIEESVWSPRFGLKGKVDATVKMKVTDSTRQA 566
Query: 610 NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMV 669
++PLE KTG++ +++HRAQV+LY L++ + ++ I +GLLYY++S++T V+
Sbjct: 567 TEHLVPLEVKTGQMIAKYGAIQHRAQVLLYCLMLCDSHVTTIPAGLLYYMKSNETLSVLA 626
Query: 670 QRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRA--------------------YGGNKE 709
+ +++ L++ RN A LP MLR G E
Sbjct: 627 KDNEIRALLIARNHLARYHDNHWDHVTLPEMLREPRICQHCPRLIECSLYHKVFENGTVE 686
Query: 710 CSGLGNMFDSHIYHLTTAHCSFLRHWDRLI--DLEAKEMQVVKNEIW-------CSRGSG 760
SGL + S ++ ++ F RHW L+ ++ ++ + +++ IW G
Sbjct: 687 SSGLREHYPSVLHQMSPLCVDFYRHWHSLVIEEMTHEQSESIRDAIWRTTVHDRVREGCC 746
Query: 761 GNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDM 820
N+ C ++ + K + F+RQ S+ +S +
Sbjct: 747 LNNLLSCQPESPIEGPGGNLKVKQT------FLRQ--------GSESNSPL--------- 783
Query: 821 DCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV 880
L D + +S + ++A G I I+ ++++ K + + ++
Sbjct: 784 ---LSLYDRIHVSHDDINWSIAMGYIMNINEQSITLALDKSVPVG-------------QL 827
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSS-------QLRRMIVDLEAPRFDSGSV---- 929
+ ID S R+ + L +A S QLR +++DL PRF V
Sbjct: 828 YTIDP-------SFGRFGSLVLSTLAAVCSSDGEREQQLRELVIDLREPRFSEEKVDILS 880
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
S+D LS +LN+ QR+++ K L+++DY+L+LGMPGTGKT+T+ V+ L+ RG
Sbjct: 881 ASEDSLLS------TLNEQQRQSVRKALSSRDYSLVLGMPGTGKTTTIACLVQILVTRGY 934
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
S+LLTS+TNSAVDN+L+KL + FV +G H
Sbjct: 935 SVLLTSFTNSAVDNVLMKLIENASRFVLVGDH 966
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 137/278 (49%), Gaps = 59/278 (21%)
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
AS+FVLVGDHYQLPPLV+S A+ IMELS
Sbjct: 957 ASRFVLVGDHYQLPPLVKSPIAK-------------------------------NIMELS 985
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCS---PWLKEALNPCRPVIFVNTDMLPAY-EA 1209
N LIY + L C S+++A A + + S WL A++P V+F+NTD A E
Sbjct: 986 NCLIYDNLLCCASEDVAGATMSIPGWKSSEIKFDWLAYAVDPNNNVVFLNTDKSGAMLEE 1045
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-------- 1261
K + N E ++ I + LV+ + DI +IT Y +Q LI SL S
Sbjct: 1046 KISDHMCNLFEVNIVVSIIRTLVQLGVSPSDILVITQYKNQQRLITKSLHESETSSQTSF 1105
Query: 1262 --------------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
SVE+ T+D+ QGRDK C+LVSFVRS N LL +W RINVA
Sbjct: 1106 ETCTSSFIPRNEYRSVEVLTVDRCQGRDKSCVLVSFVRS--NTSGKVGQLLLNWQRINVA 1163
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LTRAK KLI +GSC TLS P + LI + + + N
Sbjct: 1164 LTRAKHKLIFIGSCDTLSHSPHILKLITLINQHEWMFN 1201
>gi|301613021|ref|XP_002936016.1| PREDICTED: DNA2-like helicase [Xenopus (Silurana) tropicalis]
Length = 927
Score = 238 bits (606), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 197/654 (30%), Positives = 304/654 (46%), Gaps = 94/654 (14%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVH-LWEDWFHTVIAPGDTVNVIG 428
+ VL V E V A+ K L + Q G++ + L +DW I PGD +++ G
Sbjct: 54 YCVLNVKE-------VYAQGEEKHLTITASQEGDDLELCILKDDWVALHIKPGDIIHLEG 106
Query: 429 EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLK-CSERSISALLGT 487
+ R+ +LI++PD+L+SGT +A C RRSVL E+ K C + S L+GT
Sbjct: 107 NCAFDNTWTISRDTGYLILYPDLLISGTSIANGIRCLRRSVLSEKFKVCDKGSRQMLIGT 166
Query: 488 LLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVNENDIHKTLVEAIPKMLN 545
+LH IFQ + T L+E A + K ++ +Y +N+ D+ + E +P
Sbjct: 167 MLHDIFQRATTRGF-TDSVLQELAHHTVHGPKYLKEMYQLKLNQTDVMGEVQEYLPSFAK 225
Query: 546 WIILFKDSQDLNTPTVDF----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVK 601
W I F + LN ++ D + K+SE DIEE W+P++GLKG ID + RVK
Sbjct: 226 WAIDFM-THPLNQHQINVTRPTAGDPTEATKVSEFLDIEENIWSPRFGLKGKIDVTARVK 284
Query: 602 IESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQS 661
I K ++ + I+PLE KTGK N S+EHR+QV+LYTLL ER + ++GLL YL++
Sbjct: 285 IHQK-SKSHLKIMPLELKTGKESN---SIEHRSQVVLYTLLSQERR-EDPEAGLLLYLKT 339
Query: 662 DQTQGVMVQRSDLVGLIMRRNE---FANDIIKAS-------TTQQLPPMLRAYGGNKECS 711
V R D L+ RNE + +++ S T LP ++ K CS
Sbjct: 340 GNMYSVPGNRLDRRELLKIRNELSYYLTNVVHKSDNGSKEITLASLPALIADRQACKFCS 399
Query: 712 GLGN-----------------------MFDSHIYHLTTAHCSFLRHWDRLIDLE--AKEM 746
+ N + HL H + R W + LE +K+
Sbjct: 400 QMRNCALYSRSVEQQIENCYIPAEMIPVVQKETEHLNKDHLQYFRLWYLMCTLEGNSKDS 459
Query: 747 QVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASD 806
++ + IW S C+ +++ + + D + ++ F R+ P N
Sbjct: 460 KMGRKNIWMMSSSEREEDGQCIGNLIRTGPVQ---TISDGQHLHSFQRKSGTVPATN--- 513
Query: 807 GDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPL-RLP 865
L SGD V++S E LA++SG I E+ +++ + L +LP
Sbjct: 514 -----------------LMSGDRVVVSGEDKFLALSSGYIKEVKHNNITCILDRSLGKLP 556
Query: 866 GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD 925
+ LL +R+D +E NL +L S S +LR++I+D P F
Sbjct: 557 --------EDLL---FRLDHEEGGGGLESHLGNLSRLMENSPVSDKLRKLIIDFSKPNFV 605
Query: 926 S--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTM 977
SV D K LN Q++A+ +VL +KDY LI+GMPGTGKT+T+
Sbjct: 606 QHLSSVLPSDAKDIVANILKGLNKPQKQAMKRVLLSKDYTLIVGMPGTGKTTTI 659
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 116/246 (47%), Positives = 155/246 (63%), Gaps = 17/246 (6%)
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
H QLPPLVQS EARE GM SLF+RL E + +A+ L QYRM IM LSN L+Y RL
Sbjct: 663 HQQLPPLVQSAEARELGMSESLFKRL-ERNQEAVVQLTVQYRMNSQIMALSNKLVYEGRL 721
Query: 1163 SCGSDEIANAKIKVSDLSSC-----------SPWLKEALNPCRPVIFVNTDMLPAYEAKD 1211
C SD ++NA +K+ + + S W+K+ L P PV F+NT+ +PA E ++
Sbjct: 722 ECASDRVSNAVVKLPHIKTLLLELEFRESQESMWIKDVLEPSNPVCFLNTEKIPALETEE 781
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR---HSLSVSSVEIHTI 1268
++N +EA L+ +T+ +K DIGII PY Q +I +SLS S+VE++T+
Sbjct: 782 KGGISNWIEAKLVFCLTKLFLKAGCRPSDIGIIAPYRQQLKVISNYFNSLSASAVEVNTV 841
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
DKYQGRDK I+VSFVRS+ + + LL DW R+NVALTRAK KLIM+G TLS+
Sbjct: 842 DKYQGRDKSVIIVSFVRSNIDGK--LGDLLKDWRRLNVALTRAKHKLIMLGCVPTLSRFL 899
Query: 1329 LLKLLI 1334
L+ LI
Sbjct: 900 CLEQLI 905
>gi|257051542|ref|YP_003129375.1| DNA replication factor Dna2 [Halorhabdus utahensis DSM 12940]
gi|256690305|gb|ACV10642.1| DNA replication factor Dna2 [Halorhabdus utahensis DSM 12940]
Length = 902
Score = 236 bits (602), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 261/974 (26%), Positives = 420/974 (43%), Gaps = 181/974 (18%)
Query: 407 VHLWEDWFHT--VIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAA 460
V LW W T V+ G V V E+ + + G E+ ++V PD +V T V +
Sbjct: 42 VTLWGKWTETASVLEAGMDVAVYDAEEREYRGETQFTTG-EDTMVVVEPDFIVDVTDVRS 100
Query: 461 SFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIE 520
CPR L+ +L + + + GT++H++F L+ +++E
Sbjct: 101 WVQCPRMYYLN-KLSGTPLAYPVVKGTIVHEVF-----------------GDLLRGRDVE 142
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIE 580
A V E + L L +D++ + +D S L+ +TD
Sbjct: 143 DAVAERVEEVGLELGL------------LGRDAETVRQDALDHASAIEGWLQQGHLTDGG 190
Query: 581 EMAWAP--------------KYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNG 626
+ + P +YGLKG DA R GM P+E KTGK N
Sbjct: 191 QTTFGPTEGEWRSEQTLISQRYGLKGRADAVRR-----------GM--PVELKTGKNTNR 237
Query: 627 QSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFAN 686
+ + + Q Y L++ E + ++G L Y T+ V+R++ G + EF+
Sbjct: 238 EPRFQDKIQAAAYALILGEHGEEPPNTGTLLY-----TKNAAVERTEEGGDLSPAKEFS- 291
Query: 687 DIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRL------ID 740
+ L +LR E + + + D + A C + D +D
Sbjct: 292 -----IGSGLLEFVLRT---RNEIAAMEHGMDVPTGYEADAKCEYCFEQDTCMAVSGRLD 343
Query: 741 LEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLD---ASNEHQKSYR--------DNRFV 789
E+K QV R +F +I + A E+ K +R D+R +
Sbjct: 344 QESKAGQVGTPIPEDER----EYFEANYRAIEAERRAAHREYAKLWRQDKEERAEDDRAL 399
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEI 849
P+ DG + A +R GD V+L+ + D + + +
Sbjct: 400 IDL----EPTGQRELDDGSWELRAK--ATGATSKIREGD-VVLANDGDPIE-GEAELARV 451
Query: 850 SRF--HVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSA 907
R + V+ +P+ E+ R+D S M + LQ
Sbjct: 452 QRLSAEIVVTADEPV----------------ELRRLDVYPSELSTDRMLTAIHDALLQ-- 493
Query: 908 QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILG 967
QS + ++ +AP F +D A +++ + N Q RA+ + + A+D+ALI G
Sbjct: 494 QSPDEKAVLFGGQAPAF-------EDVAETFVEN----NPAQDRAVRRAVGAEDFALIHG 542
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSI-DFVRIGRHEVVHK 1026
PGTGKT T+ V AL+ RG +LL+++TN AVDN + L Q + D VR+G V +
Sbjct: 543 PPGTGKTYTLATLVDALVERGERVLLSAFTNRAVDNAVEALLEQGVEDVVRMGTETGVRE 602
Query: 1027 EIQKHCLSAMNINSVEEIKKRLDQVK---VVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++ KH + ++ R D++ VVA T + ++ ++ FDV ++DEAGQ T
Sbjct: 603 DL-KH----VRLDPAGNPDARADELTDAPVVAATTATCGSRIMREQDFDVAVIDEAGQLT 657
Query: 1084 LPVSLGPLMFASKFVLVGDHYQLPPLVQSTE---ARENGMEI--SLFRRLSEEHPQAISA 1138
P +L + A +FVLVGDH QLPP+V++ + R+ ++ SLF RL + H A
Sbjct: 658 EPGALAAVARAERFVLVGDHEQLPPVVRAEDDIADRDATADLSQSLFERLIDAHSDAGVL 717
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-WLKEALNPCRPVI 1197
L QYRM Q I S+ Y +L + EIA + +DL P L + L V
Sbjct: 718 LDRQYRMAQRIQAYSSREFYDGQLRPATGEIAGQTL--ADLDGVDPAALPDHLGGR--VT 773
Query: 1198 FVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
F++ D Q + NP EA +A+ + + ++ D+G+I PY +Q I
Sbjct: 774 FLD---------PDGQAVGNTNPDEAAAVAQTVESYLDAGVDPGDVGVIAPYRAQVAEIG 824
Query: 1256 HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG----DWHRINVALTRA 1311
+ V + T+D++QG K+ +LVSFV T SL G D+ RINVALTRA
Sbjct: 825 QRVP-DGVTVDTVDRFQGSSKEVVLVSFV--------ATGSLDGPIFEDYRRINVALTRA 875
Query: 1312 KKKLIMVGSCRTLS 1325
K+ L+++G LS
Sbjct: 876 KRALVLIGDADALS 889
>gi|344299934|gb|EGW30274.1| hypothetical protein SPAPADRAFT_63122 [Spathaspora passalidarum NRRL
Y-27907]
Length = 356
Score = 236 bits (601), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 177/280 (63%), Gaps = 14/280 (5%)
Query: 1053 VVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
VVA TCLGI + + KFD CI+DEA Q +LP++LGPL F+ KF+LVGDH+QLPPLVQ
Sbjct: 5 VVATTCLGINDITFNFRSKFDYCIVDEASQVSLPINLGPLRFSDKFILVGDHFQLPPLVQ 64
Query: 1112 STEAR-ENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+ + G+ SLF+ L+E HP+++ L QYRMC+ IM LSN L+Y +RL CGS +A
Sbjct: 65 HRDPKIVQGLSHSLFKLLAETHPESVCELTYQYRMCEDIMSLSNVLVYNNRLKCGSSAVA 124
Query: 1171 NAKIKVSDLSSCSP---------WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
N + + + ++ W+ NP V+F++ D L A E+ +T+ N EA
Sbjct: 125 NQSLTIPNANAIDEFTSGSVNQRWMDNIFNPKNKVLFLDHDQLDASESVVGETVQNSAEA 184
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCIL 1280
LI +I + LV ++ IG+++ Y +Q L R S + VEI T D+YQGRDK+CI+
Sbjct: 185 KLIYQIVEALVLAGVDQDKIGVMSFYKAQLRLLKRLLSSKTEVEILTADQYQGRDKECII 244
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+S VRS N N L+ +W R+NVALTRAK KLI++GS
Sbjct: 245 ISLVRS--NQENRAGDLVKEWRRLNVALTRAKSKLIILGS 282
>gi|300711188|ref|YP_003737002.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|448296711|ref|ZP_21486764.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|299124871|gb|ADJ15210.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
gi|445580843|gb|ELY35213.1| DNA replication factor Dna2 [Halalkalicoccus jeotgali B3]
Length = 903
Score = 235 bits (600), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 214/392 (54%), Gaps = 24/392 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ + + AKD+ALI G PGTGKT T+ A++ ++ RG +LL+++TN AVDN L
Sbjct: 518 NAAQNEAVSRAIAAKDFALIHGPPGTGKTYTIARAIRTMVERGERVLLSAFTNRAVDNAL 577
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L Q +FVR+G V +++Q + L + L + VVA T +
Sbjct: 578 EALSDQGFTNFVRVGTEHGVREDMQPYRLDGRGEPGT--LASTLREAPVVAATTSSCGSR 635
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST------EAREN 1118
+L ++ FDV ++DEA Q T P +L + A +FVLVGDH+QLPP+VQS +A+
Sbjct: 636 VLREQSFDVALVDEASQLTEPATLAAINRAERFVLVGDHHQLPPVVQSEADESTGDAKGA 695
Query: 1119 GMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
+ SLF RL EHP A L+ QYRM Q I S+ Y +L + +A ++ +D
Sbjct: 696 DLSRSLFERLIGEHPDAGVMLERQYRMAQRIQAFSSQEFYDGKLRPATGAVAAQRL--TD 753
Query: 1179 LSSCSPW-LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
L SP L E L PV F++ D + EA IA++ + V+ +
Sbjct: 754 LEGVSPGTLPEELRD--PVAFIDV-------KGDDAAHTDTEEATRIAELVERYVEAGVP 804
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
++IG+I P+ +Q I ++ V + T+D++QG K+ ILVSFV S+ P + +
Sbjct: 805 PEEIGVIAPFRAQVATITQTVR-EGVAVDTVDRFQGSSKEVILVSFVAST--PADLEGPI 861
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
D+ R+NVALTRAKK L +VG+ LS PL
Sbjct: 862 FDDYRRLNVALTRAKKSLGLVGTRGALSADPL 893
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 59/256 (23%)
Query: 404 ERAVHLWEDWFHT--VIAPGDTVNVIG--EFDDQGKCD--VGRENNFLIVHPDVLVSGTR 457
E +V LW W T + PG + V E + QG+ GR ++++IV P LV+ T
Sbjct: 36 EFSVTLWGKWAETGEYLQPGMELVVTDPEETEWQGETGYATGR-DSYVIVEPGFLVNVTD 94
Query: 458 VAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
+ + CPR L+ +L + + GT++H++F L+
Sbjct: 95 IRSWVQCPRMYYLN-KLSGVPLNYPVVKGTIVHEVF-----------------GDLLRGA 136
Query: 518 NIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVT 577
+ E+ A + E + L++ P+ + ++ N +D +S+ T
Sbjct: 137 DFEAAVADRIEEAGLELGLLDRDPEAV------REEVRQNARAIDG--------WLSQGT 182
Query: 578 DIEEMAWAPKY-------GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
E+ +W +Y G+KG DA R GM P+E KTGK N +
Sbjct: 183 LSEDDSWRSEYTLISERFGIKGRADALRR-----------GM--PVELKTGKNTNREPRF 229
Query: 631 EHRAQVILYTLLMSER 646
+ Q Y LL+ E+
Sbjct: 230 PDKIQAACYALLLDEQ 245
>gi|448633882|ref|ZP_21674381.1| DNA helicase [Haloarcula vallismortis ATCC 29715]
gi|445750573|gb|EMA02011.1| DNA helicase [Haloarcula vallismortis ATCC 29715]
Length = 913
Score = 232 bits (591), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 204/382 (53%), Gaps = 24/382 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 540 NDAQNEAVQLAVGAADFALVHGPPGTGKTYTLARMVRALVARGDRVLLSAFTNRAVDNLL 599
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++QK+ L E RL +VVA T
Sbjct: 600 EALEDQGFTDIVRVGTESGVREDMQKYRLETSGDPG--ECASRLQNAQVVAATTATCGGS 657
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + + SL
Sbjct: 658 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---EDETLSTSL 714
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL + HP A L QYRM Q I ++ Y +L + E+A ++ D S +
Sbjct: 715 FERLIDAHPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRLNDLDGVSTAS 774
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIGI 1243
L E L V FV+ + Q N NP EA IA++ + +DIG+
Sbjct: 775 -LPEGLRD--RVAFVDPN--------GSQIGNTNPTEADRIAELVASYRSAGVPAEDIGV 823
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I PY +Q I L V + T+D++QG K+ I++SFV + N S + D+ R
Sbjct: 824 IAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----NLDSPIFEDYRR 877
Query: 1304 INVALTRAKKKLIMVGSCRTLS 1325
INVALTRAKK L++VG L+
Sbjct: 878 INVALTRAKKALVLVGDGDALA 899
Score = 50.4 bits (119), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 116/302 (38%), Gaps = 47/302 (15%)
Query: 401 SGEERAVHLWEDWFHT--VIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W VI G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAQVIETGMEIAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ-DLNTPTVDFGSDGLKKLKI 573
L + G ++ + + + W+ ++ D T D +
Sbjct: 157 LDIGL-----LGREAGEVAGDVRDHASAIQGWLQQGTLTETDGATTAADNSERDFSPAES 211
Query: 574 ---SEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
SE+T I E ++G+KG DA R GM P+E KTGK +
Sbjct: 212 EWRSEMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRF 253
Query: 631 EHRAQVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNE 683
+ + Q Y L++ ER D+G L Y T+ V R++ G + E
Sbjct: 254 QDKIQATAYALMLGERTAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKE 308
Query: 684 FA 685
F+
Sbjct: 309 FS 310
>gi|448659137|ref|ZP_21683105.1| DNA helicase [Haloarcula californiae ATCC 33799]
gi|445760639|gb|EMA11896.1| DNA helicase [Haloarcula californiae ATCC 33799]
Length = 895
Score = 231 bits (590), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 203/382 (53%), Gaps = 24/382 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 522 NDAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALVARGDRVLLSAFTNRAVDNLL 581
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++QK+ L E RL +VVA T
Sbjct: 582 EALEEQGYTDIVRVGTESGVREDMQKYRLETSGDPG--ECASRLQSAQVVAATTATCGGS 639
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + + SL
Sbjct: 640 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---EDETLSTSL 696
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL + HP A L QYRM Q I ++ Y +L + E+A ++ D +
Sbjct: 697 FERLIDAHPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRLDDLD-GVATA 755
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIGI 1243
L EAL V FV++ Q N NP EA IA+I + DIG+
Sbjct: 756 SLPEALRD--RVAFVDS--------GGSQVGNTNPTEADRIAEIVASYRSAGVPAADIGV 805
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I PY +Q I L V + T+D++QG K+ I++SFV + S + D+ R
Sbjct: 806 IAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----TLDSPIFEDYRR 859
Query: 1304 INVALTRAKKKLIMVGSCRTLS 1325
INVALTRAKK L++VG L+
Sbjct: 860 INVALTRAKKALVLVGDGDALA 881
Score = 51.2 bits (121), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFH--TVIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W I G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAAAIETGMEIAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T ++ S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDEW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|448639724|ref|ZP_21676872.1| DNA helicase [Haloarcula sinaiiensis ATCC 33800]
gi|445762251|gb|EMA13472.1| DNA helicase [Haloarcula sinaiiensis ATCC 33800]
Length = 895
Score = 231 bits (588), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 203/382 (53%), Gaps = 24/382 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 522 NDAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALVARGDRVLLSAFTNRAVDNLL 581
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++QK+ L E RL +VVA T
Sbjct: 582 EALEEQGYTDIVRVGTESGVREDMQKYRLETSGDPG--ECASRLQSAQVVAATTATCGGS 639
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +F+LVGDH QLPP+VQS + + SL
Sbjct: 640 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFMLVGDHQQLPPVVQS---EDETLSTSL 696
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL + HP A L QYRM Q I ++ Y +L + E+A ++ D +
Sbjct: 697 FERLIDAHPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRLDDLD-GVATA 755
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIGI 1243
L EAL V FV++ Q N NP EA IA+I + DIG+
Sbjct: 756 SLPEALRD--RVAFVDS--------GGSQVGNTNPTEADRIAEIVASYRSAGVPSADIGV 805
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I PY +Q I L V + T+D++QG K+ I++SFV + S + D+ R
Sbjct: 806 IAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----TLDSPIFEDYRR 859
Query: 1304 INVALTRAKKKLIMVGSCRTLS 1325
INVALTRAKK L++VG LS
Sbjct: 860 INVALTRAKKALVLVGDGDALS 881
>gi|55377781|ref|YP_135631.1| DNA helicase [Haloarcula marismortui ATCC 43049]
gi|55230506|gb|AAV45925.1| DNA helicase [Haloarcula marismortui ATCC 43049]
Length = 911
Score = 231 bits (588), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 202/382 (52%), Gaps = 24/382 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 538 NDAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALVARGDRVLLSAFTNRAVDNLL 597
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V ++QK+ L E RL +VVA T
Sbjct: 598 EALEEQGYTDIVRVGTESGVRDDMQKYRLETSGDPG--ECASRLQSAQVVAATTATCGGS 655
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + + SL
Sbjct: 656 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---EDETLSTSL 712
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL + HP A L QYRM Q I ++ Y +L + E+A ++ D +
Sbjct: 713 FERLIDAHPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRLDDLD-GVATA 771
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIGI 1243
L EAL V FV++ Q N NP EA IA+I + DIG+
Sbjct: 772 SLPEALRD--RVAFVDS--------GGSQVGNTNPTEADRIAEILASYRSAGVPAADIGV 821
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I PY +Q I L V + T+D++QG K+ I++SFV + S + D+ R
Sbjct: 822 IAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATE----TLDSPIFEDYRR 875
Query: 1304 INVALTRAKKKLIMVGSCRTLS 1325
INVALTRAKK L++VG L+
Sbjct: 876 INVALTRAKKALVLVGDGDALA 897
Score = 51.6 bits (122), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFH--TVIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W I G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAAAIETGMEIAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T ++ S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDEW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|448677737|ref|ZP_21688927.1| DNA helicase [Haloarcula argentinensis DSM 12282]
gi|445773412|gb|EMA24445.1| DNA helicase [Haloarcula argentinensis DSM 12282]
Length = 911
Score = 230 bits (586), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 147/382 (38%), Positives = 203/382 (53%), Gaps = 24/382 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 538 NDAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALIARGDRVLLSAFTNRAVDNLL 597
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++QK+ L E RL +VVA T
Sbjct: 598 EALEDQGYTDIVRVGTESGVREDMQKYRLETSGDPG--ECASRLQSAQVVAATTATCGGS 655
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + SL
Sbjct: 656 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---ENETLSTSL 712
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL +++P A L QYRM Q I ++ Y +L + E+A ++ D S S
Sbjct: 713 FERLIDDNPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRLDDLDGVSLSN 772
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIGI 1243
L E L V FV+ D Q N NP+EA I+ I + DIG+
Sbjct: 773 -LPEGLRD--RVAFVDPD--------GSQVGNTNPIEADRISDIVASYRSARVPADDIGV 821
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I PY +Q I L V + T+D++QG K+ I++SFV + S + D+ R
Sbjct: 822 IAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----TLDSPIFEDYRR 875
Query: 1304 INVALTRAKKKLIMVGSCRTLS 1325
INVALTRAKK L++VG L+
Sbjct: 876 INVALTRAKKALVLVGDGDALA 897
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFH--TVIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W VI G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAAVIETGMEIAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTIVHEVFGDLLRGRELDAAIGEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T + S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDQW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|426364936|ref|XP_004049547.1| PREDICTED: DNA replication ATP-dependent helicase/nuclease DNA2
[Gorilla gorilla gorilla]
Length = 687
Score = 229 bits (585), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 299/622 (48%), Gaps = 88/622 (14%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + ++ +LI++PD+L+SGT +A+S C RR+
Sbjct: 82 LRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPDMLISGTSIASSIRCMRRA 140
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 141 VLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLKEMYRL 199
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISEVT 577
+++++I + + + +P W F S D + SD K +++ +
Sbjct: 200 NLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM 259
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+
Sbjct: 260 DIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEHRSQVV 315
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++T
Sbjct: 316 LYTLLSQERRADP-EAGLLLYLKTGQMYTVPANHLDKRELLKLRNQMAFSLFHRISKSAT 374
Query: 694 TQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
Q+ LP ++ K CS +GN + HL
Sbjct: 375 RQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDGSSVPIVMLPKIEEETQHLK 434
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H + W ++ LE++ KN IW S C+ +++ EH K
Sbjct: 435 QTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMAASEMEKSGSCIGNLI---RMEHVKIV 491
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVA 842
D +++++F +H AIP + L +GD VILS E L A++
Sbjct: 492 CDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVILSGEERSLFALS 531
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + EI+ V+ L RN S +S L +R+D++E NL +L
Sbjct: 532 RGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLSKL 581
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
+ S +LR +I+D P+F S SV D + K LN QR+A+ KVL +K
Sbjct: 582 MENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSK 641
Query: 961 DYALILGMPGTGKTSTMVHAVK 982
DY LI+GMPGTGKT+T+ V+
Sbjct: 642 DYTLIVGMPGTGKTTTICTLVR 663
>gi|344211858|ref|YP_004796178.1| DNA helicase [Haloarcula hispanica ATCC 33960]
gi|343783213|gb|AEM57190.1| DNA helicase [Haloarcula hispanica ATCC 33960]
Length = 895
Score = 229 bits (584), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/383 (38%), Positives = 201/383 (52%), Gaps = 26/383 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 522 NDAQNEAVQLAVGAADFALVHGPPGTGKTYTLARMVRALVARGDRVLLSAFTNRAVDNLL 581
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V ++QK+ L E RL +VVA T
Sbjct: 582 EALEEQGYTDIVRVGTESGVRDDMQKYRLETSGDPG--ECASRLQGAQVVAATTATCGGS 639
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + + SL
Sbjct: 640 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---EDETLSTSL 696
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS- 1183
F RL + HP+A L QYRM Q I ++ Y +L + E+A ++ DL S
Sbjct: 697 FERLIDAHPEAGVMLDRQYRMAQHIQAFASREFYDGQLRPATGEVAAQRL--DDLGGVSM 754
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDIG 1242
L E L V FV D Q N NP EA IA+I + DIG
Sbjct: 755 ADLPEILQD--RVAFVAPD--------GSQVGNTNPAEADRIAEIVASYRSAGVPANDIG 804
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+I PY +Q I L V + T+D++QG K+ I++SFV + S + D+
Sbjct: 805 VIAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----TLDSPIFEDYR 858
Query: 1303 RINVALTRAKKKLIMVGSCRTLS 1325
RINVALTRAKK L++VG L+
Sbjct: 859 RINVALTRAKKALVLVGDGDALA 881
Score = 53.1 bits (126), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 116/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFH--TVIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W VI G V V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAAVIETGMEVAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T ++ S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDEW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|39793966|gb|AAH63664.1| DNA2 protein [Homo sapiens]
Length = 829
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 188/623 (30%), Positives = 299/623 (47%), Gaps = 88/623 (14%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + ++ +LI++PD+L+SGT +A+S C RR+
Sbjct: 89 LRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPDMLISGTSIASSIRCMRRA 147
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 148 VLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLKEMYRL 206
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISEVT 577
+++++I + + + +P W F S D + SD K +++ +
Sbjct: 207 NLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM 266
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+
Sbjct: 267 DIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEHRSQVV 322
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++T
Sbjct: 323 LYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSAT 381
Query: 694 TQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
Q+ LP ++ K CS +GN + HL
Sbjct: 382 RQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEETQHLK 441
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H + W ++ LE++ KN IW S C+ +++ EH K
Sbjct: 442 QTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHVKIV 498
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVA 842
D +++++F +H AIP + L +GD VI+S E L A++
Sbjct: 499 CDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERSLFALS 538
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + EI+ V+ L RN S +S L +R+D++E NL +L
Sbjct: 539 RGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLSKL 588
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
+ S +LR +I+D P+F S SV D + K LN QR+A+ KVL +K
Sbjct: 589 MENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSK 648
Query: 961 DYALILGMPGTGKTSTMVHAVKA 983
DY LI+GMPGTGKT+T+ V A
Sbjct: 649 DYTLIVGMPGTGKTTTICTLVPA 671
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
++PA E + ++N EA LI +T VK DIGII PY Q +I L S+
Sbjct: 668 LVPAPEQVEKGGVSNVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLKIINDLLARSI 727
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
VE++T+DKYQGRDK +LVSFVRS N LL DW R+NVA+TRAK KLI++G
Sbjct: 728 GMVEVNTVDKYQGRDKSIVLVSFVRS--NKDGTVGELLKDWRRLNVAITRAKHKLILLGC 785
Query: 1321 CRTLSKVPLLKLLINKVGEQSGILN 1345
+L+ P L+ L+N + + I++
Sbjct: 786 VPSLNCYPPLEKLLNHLNSEKLIID 810
>gi|452207608|ref|YP_007487730.1| ATP-dependent DNA helicase Dna2 [Natronomonas moolapensis 8.8.11]
gi|452083708|emb|CCQ37022.1| ATP-dependent DNA helicase Dna2 [Natronomonas moolapensis 8.8.11]
Length = 883
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 214/393 (54%), Gaps = 27/393 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ L A D+ALI G PGTGKT T+ HAV+AL+ RG +LL+++TN AVDN +
Sbjct: 512 NGAQDDAVNAALRADDFALIHGPPGTGKTYTLAHAVRALVERGERVLLSAFTNRAVDNAI 571
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+SQ D +R G V +++Q++ L EE L VVA T +
Sbjct: 572 EALESQDFNDVLRWGSETGVREDMQEYRLE--RRGDPEERAAALSSADVVAATTAACGSR 629
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L + FDV ++DEAGQ T P + P A +FVLVGDH QLPP+V++ EN ++ISL
Sbjct: 630 ALKSQSFDVAVVDEAGQLTEPGTFLPATLADRFVLVGDHRQLPPVVRA----ENDLQISL 685
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL +EHP A L QYRM Q I + Y +L + E+A ++ +DL
Sbjct: 686 FERLIDEHPDAAVMLDRQYRMSQRIQYFPSEAFYDGQLRPATAEVAARRL--ADLGGVD- 742
Query: 1185 WLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+AL P V FV+ P +A+ + NP EA +A I + + ++ DIG
Sbjct: 743 --ADALPPALSGGVSFVD----PGGDARGN---TNPAEADRVAGIVRSFLDAGVDPDDIG 793
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+I P+ +Q I L S V + T+D++QG K+ +++SF + + +S + D
Sbjct: 794 VIAPFRAQVAEISRRL--SGVAVDTVDRFQGSAKEVVVISFTATG----DLSSPIFEDHR 847
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R+NVALTRAK+ L++VG TL+ P ++
Sbjct: 848 RVNVALTRAKRSLVLVGDRATLTSDPFYARMLE 880
>gi|84627485|gb|AAI11741.1| DNA2 protein [Homo sapiens]
Length = 687
Score = 227 bits (579), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 187/622 (30%), Positives = 299/622 (48%), Gaps = 88/622 (14%)
Query: 409 LWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRS 468
L DW + PGD +++ G+ + ++ +LI++PD+L+SGT +A+S C RR+
Sbjct: 82 LRNDWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPDMLISGTSIASSIRCMRRA 140
Query: 469 VLDERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYAC 525
VL E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y
Sbjct: 141 VLSETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLKEMYRL 199
Query: 526 GVNENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISEVT 577
+++++I + + + +P W F S D + SD K +++ +
Sbjct: 200 NLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPM 259
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
DIEE W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+
Sbjct: 260 DIEESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEHRSQVV 315
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKAST 693
LYTLL ER ++GLL YL++ Q V D L+ RN+ A + I K++T
Sbjct: 316 LYTLLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSAT 374
Query: 694 TQQ-----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
Q+ LP ++ K CS +GN + HL
Sbjct: 375 RQKTQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDCSSVPIVMLPKIEEETQHLK 434
Query: 726 TAHCSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSY 783
H + W ++ LE++ KN IW S C+ +++ EH K
Sbjct: 435 QTHLEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHVKIV 491
Query: 784 RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVA 842
D +++++F +H AIP + L +GD VI+S E L A++
Sbjct: 492 CDGQYLHNFQCKH----------------GAIPVTN----LMAGDRVIVSGEERSLFALS 531
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
G + EI+ V+ L RN S +S L +R+D++E NL +L
Sbjct: 532 RGYVKEINMTTVTC-------LLDRNLSVLPESTL---FRLDQEEKNCDIDTPLGNLSKL 581
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDS--GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
+ S +LR +I+D P+F S SV D + K LN QR+A+ KVL +K
Sbjct: 582 MENTFVSKKLRDLIIDFREPQFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSK 641
Query: 961 DYALILGMPGTGKTSTMVHAVK 982
DY LI+GMPGTGKT+T+ V+
Sbjct: 642 DYTLIVGMPGTGKTTTICTLVR 663
>gi|448688270|ref|ZP_21694103.1| DNA helicase [Haloarcula japonica DSM 6131]
gi|445779331|gb|EMA30261.1| DNA helicase [Haloarcula japonica DSM 6131]
Length = 895
Score = 226 bits (575), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 148/384 (38%), Positives = 203/384 (52%), Gaps = 28/384 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDNLL
Sbjct: 522 NDAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALVDRGDRVLLSAFTNRAVDNLL 581
Query: 1006 IKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++QK+ L E RL +VVA T
Sbjct: 582 EALEDQGYTDIVRVGTESGVREDMQKYRLETSGDPG--ECASRLQNAQVVAATTATCGGS 639
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P +L A +FVLVGDH QLPP+VQS + SL
Sbjct: 640 TLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---ENETLSTSL 696
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL +++P A L QYRM Q I ++ Y L + E+A ++ DL S
Sbjct: 697 FERLIDDNPDAGVMLDRQYRMAQHIQAFASREFYDGGLRPATGEVAAQRL--DDLDGVS- 753
Query: 1185 WLKEAL--NPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEACLIAKITQELVKNEIEGKDI 1241
+AL N V FV+ D Q N NP EA IA+I + DI
Sbjct: 754 --LDALPANLRERVSFVDPD--------GSQVGNTNPAEADRIAEIVASYRAAGVPADDI 803
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
G+I PY +Q I L V + T+D++QG K+ I++SFV + S + D+
Sbjct: 804 GVIAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVISFVATG----TLDSPIFEDY 857
Query: 1302 HRINVALTRAKKKLIMVGSCRTLS 1325
RINVALTRAKK L++VG L+
Sbjct: 858 RRINVALTRAKKALVLVGDGDALA 881
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 115/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFHT--VIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W VI G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAEVIETGMEIAVYNPDEREYQGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T + S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDQW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|448733625|ref|ZP_21715867.1| DNA replication factor Dna2 [Halococcus salifodinae DSM 8989]
gi|445802145|gb|EMA52452.1| DNA replication factor Dna2 [Halococcus salifodinae DSM 8989]
Length = 915
Score = 225 bits (574), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 154/428 (35%), Positives = 217/428 (50%), Gaps = 55/428 (12%)
Query: 932 QDPALSYIWSEKSLNDD---QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+DPA I E++ D+ Q RA+ + + A+D ALI G PGTGKT T+ V+AL+ RG
Sbjct: 496 RDPAFQDI--EETFIDNNPAQDRAVRRAVGAEDCALIHGPPGTGKTYTIARTVRALVERG 553
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR 1047
+LL+++TN AVDN L L+ Q + FVR+G V ++IQ+H L + +E
Sbjct: 554 ERVLLSAFTNRAVDNALDALRDQGFEEFVRVGTEHGVREDIQEHRLESRG--DPDERAAE 611
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
L VVA T + ++ + FDV ++DEA Q T P +L + A +FVLVGDH QLP
Sbjct: 612 LRNAPVVAATTASCGSRIMREGSFDVAVIDEASQLTEPATLAAVTLADRFVLVGDHQQLP 671
Query: 1108 PLVQSTEAREN-----------------------------GMEISLFRRLSEEHPQAISA 1138
P+VQS +A + SLF RL E HP+A
Sbjct: 672 PVVQSADATGTVETTTATDGSGATAAKTMDGAGGATSGIADLSRSLFERLIETHPEAAVL 731
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC-SPWLKEALNPCRPVI 1197
L +QYRM Q I S+ Y RL S +A VSDL S L + L V
Sbjct: 732 LDTQYRMAQRIQAFSSDEFYDGRLRPASPAVAGQ--HVSDLPGVTSDALPDHLQ--ERVT 787
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
FV+ D + NP E +A+I + + DIG+I P+ +QA IR
Sbjct: 788 FVDPDGTV-------RGNTNPAEVEAVAEIVEAYASAGVARTDIGVIAPFRAQAAAIRR- 839
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
V V + T+D++QG K+ I+VSFV + + S + D+ R+NVALTRAKK L++
Sbjct: 840 -EVPDVTVDTVDRFQGSAKEIIIVSFVATG----DLDSPIFEDFRRVNVALTRAKKGLVL 894
Query: 1318 VGSCRTLS 1325
VG L+
Sbjct: 895 VGDRAALA 902
>gi|257388158|ref|YP_003177931.1| DNA replication factor Dna2 [Halomicrobium mukohataei DSM 12286]
gi|257170465|gb|ACV48224.1| DNA replication factor Dna2 [Halomicrobium mukohataei DSM 12286]
Length = 934
Score = 225 bits (573), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 207/398 (52%), Gaps = 35/398 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D AL+ G PGTGKT T+ V+AL+ RG +LL+++TN AVDN +
Sbjct: 561 NDAQNEAVRLAVGADDCALVHGPPGTGKTYTLARIVRALVARGDRVLLSAFTNRAVDNCI 620
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q++ L ++ RL+ VVA T +
Sbjct: 621 EALEEQGFTDIVRLGTESGVREDMQQYRLE--TAGDPDDCVGRLEDASVVAATTASCGSR 678
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ + FDV I+DEAGQ T P +L A +FVLVGDH QLPP+VQS + + SL
Sbjct: 679 VAKTQSFDVAIVDEAGQLTEPGTLAATTLADRFVLVGDHQQLPPVVQS---EDETLSRSL 735
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD---LSS 1181
F RL E +P A L QYRM Q I ++ Y +L + E+A +I D L +
Sbjct: 736 FERLIEAYPDASVLLDRQYRMAQQIQAFASREFYDGQLRPATGEVAAQRIADLDGVTLDA 795
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
L++ +N P V+ + NP EA +A + + IE + +
Sbjct: 796 LPETLRDGVNFVDPDGHVDGN-------------TNPAEARAVADVVDAYLAAGIESEAV 842
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG-- 1299
G+I PY +Q I + V + T+D++QG K+ I+VSFV T SL G
Sbjct: 843 GVIAPYRAQVAEIDKHVP-EGVTVDTVDRFQGSSKEVIVVSFV--------ATGSLDGPI 893
Query: 1300 --DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D+ RINVALTRAKK L++VG R LS L + ++
Sbjct: 894 FEDYRRINVALTRAKKALVLVGDERALSTDELYERMVE 931
Score = 65.5 bits (158), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 64/301 (21%)
Query: 398 NEQSGEERAVHLWEDWFHT--VIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDV 451
++ GE V LW W T V+ PG +V V E+ + + VG + ++V PD
Sbjct: 33 DDGRGEPVTVTLWGKWTETGAVLEPGMSVAVYDAEPREYRGETQYSVGSDAR-IVVEPDF 91
Query: 452 LVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
LV T V + CPR L+ +L + ++ + GT++H++F
Sbjct: 92 LVDVTDVRSWVQCPRMYYLN-KLSGTPQAYPVVKGTIVHEVF-----------------G 133
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
L+ +++ A V + L+ +L +D+ ++ D L
Sbjct: 134 DLLRGRDVAEAVAAHVED------------AGLDLGLLGRDADEVAADVRDHAEAIEGWL 181
Query: 572 KISEVTDIEEMAW-------APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ +T EE W + +YG+KG DA R GM P+E KTGK
Sbjct: 182 QQGTLT--EEDEWRSEMTLISSRYGIKGRADAVRR-----------GM--PVELKTGKNT 226
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
+ + + Q Y LL+ ER + D+G L Y T+ V+R++ G + EF
Sbjct: 227 RREPRFQDKIQAACYALLLGERREEAPDTGTLLY-----TKNAAVERTEESGDLSPAKEF 281
Query: 685 A 685
+
Sbjct: 282 S 282
>gi|448725345|ref|ZP_21707806.1| DNA replication factor Dna2 [Halococcus morrhuae DSM 1307]
gi|445798681|gb|EMA49077.1| DNA replication factor Dna2 [Halococcus morrhuae DSM 1307]
Length = 922
Score = 223 bits (569), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 216/418 (51%), Gaps = 57/418 (13%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + A D ALI G PGTGKT T+ A++AL+ RG +LL+++TN AVDN L
Sbjct: 511 NPAQDRAVRMAVGADDCALIHGPPGTGKTYTIARAIRALVDRGERVLLSAFTNRAVDNAL 570
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q DFVR+G V +++Q H L + V + L + VVA T +
Sbjct: 571 EALEEQGFTDFVRVGTESGVREDMQDHRLESRGDPDVR--ARELREAPVVAATTASCGSR 628
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE---------- 1114
+L + +FDV ++DEAGQ T P +L L A +FVLVGDH QLPP+VQS +
Sbjct: 629 VLREMEFDVALVDEAGQLTEPATLAALALADRFVLVGDHQQLPPVVQSADTVSDDTSTSE 688
Query: 1115 ----ARENG----------------------MEISLFRRLSEEHPQAISALQSQYRMCQG 1148
AR +G + SLF RL +EHP A L +QYRM Q
Sbjct: 689 DSAAARSDGGHADVQQPTESSPSGGGERAADLSRSLFERLVDEHPDASVLLDTQYRMAQR 748
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-WLKEALNPCRPVIFVNTDMLPAY 1207
I S+ Y L S +A VSDL + P L ++L + V FV+ D
Sbjct: 749 IQAYSSQEFYDGALRPASGAVAAQ--HVSDLPTVDPDALPDSLG--KRVAFVDPDGTA-- 802
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHT 1267
Q NP E IA++ + V I ++IG+I P+ +QA IR L + V + T
Sbjct: 803 -----QGNTNPAEVTAIAELVERAVAAGIPREEIGVIAPFRAQAAAIRREL--ADVAVDT 855
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
+D++QG K+ I+VSFV + + S + D R+NVALTRAKK L++VG L+
Sbjct: 856 VDRFQGSAKEVIIVSFVATG----DLDSPIFEDHRRVNVALTRAKKALVLVGDEDALA 909
>gi|242222284|ref|XP_002476867.1| predicted protein [Postia placenta Mad-698-R]
gi|220723835|gb|EED77937.1| predicted protein [Postia placenta Mad-698-R]
Length = 512
Score = 223 bits (569), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 163/503 (32%), Positives = 252/503 (50%), Gaps = 79/503 (15%)
Query: 614 LPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSD 673
+PLE KTG+ G MEHRAQ +LYTLLM+ERY + SGLLYY ++D+ V R++
Sbjct: 6 MPLEIKTGRAVAG---MEHRAQTMLYTLLMAERYGTEVPSGLLYYTRNDEVVRVPAVRNE 62
Query: 674 LVGLIMRRNEFANDIIKASTTQQ--------------------LPPMLRAYGGNKECSGL 713
L L++ RNE A +++ Q LPP + +C L
Sbjct: 63 LRALLVARNEMAGYMMRRMRQQSGAGKLEAKHEAEDMSEVESFLPPTIDDTWQCGKCYAL 122
Query: 714 G----------NMFDS-----HIY-----HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEI 753
N+ D+ IY HLT A F + W+ LI LE +++ K E+
Sbjct: 123 NTCMLYRKAVENVVDTVSPIADIYALKTSHLTNAQSEFFKKWEALIALEEQDLVRFKKEL 182
Query: 754 WCSRGSGGNHFTGCLSSIVLD-----ASNEHQKSYRDN----RFVYHFVRQHMPSPNLNA 804
W C S +VLD S+ Q + + + RF Y FV+ N++
Sbjct: 183 WTMGAQEREKRGRCFSDMVLDVSYRPGSDASQSTLKADGKIHRFTYRFVK------NMHT 236
Query: 805 SDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRL 864
+ A++ M C GD + +S E + LA+A G I +++ V V + L
Sbjct: 237 T------AASLLNGHMSC----GDAITVSVEPNLLAMARGFIVDLTPEGVVVGVDHEVNL 286
Query: 865 PGRNSSSDADSLLHE---VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEA 921
+ +H+ V+RIDKDE+ +R NL QLF + + +L+ ++VDL
Sbjct: 287 DAIRVLTSGRRAIHDHSVVFRIDKDELFGGMGRIRDNLAQLFYVNGDTRRLQ-LVVDLVP 345
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
PRF+ + L+ S LN +QR A+ KVL+A+DYALILGMPGTGKT+ + +
Sbjct: 346 PRFEDCEMTVPSTKLT---SMSQLNSNQRHAVTKVLSAQDYALILGMPGTGKTTVIAAII 402
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF--VRIGRHEVVHKEIQKHCLSAMN-I 1038
+ L+ G ++LL SYT+SAVD +L+KLK + DF +R+G + +H ++ + L+
Sbjct: 403 QKLVDIGKTVLLASYTHSAVDTILLKLKDVA-DFGILRLGNLDKIHPDVHRFTLARKRPA 461
Query: 1039 NSVEEIKKRLDQVKVVAVTCLGI 1061
++E+++ ++ VVA TCL I
Sbjct: 462 TTIEQLEHQVMTPPVVATTCLSI 484
>gi|448730176|ref|ZP_21712486.1| DNA replication factor Dna2 [Halococcus saccharolyticus DSM 5350]
gi|445793907|gb|EMA44472.1| DNA replication factor Dna2 [Halococcus saccharolyticus DSM 5350]
Length = 930
Score = 222 bits (566), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 151/426 (35%), Positives = 214/426 (50%), Gaps = 65/426 (15%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + + A D ALI G PGTGKT T+ V+AL+ RG +LL+++TN AVDN L
Sbjct: 511 NPAQDRAVRRAVGADDCALIHGPPGTGKTYTIARTVRALVERGERVLLSAFTNRAVDNAL 570
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D FVR+G V ++IQ++ L + +E L + VVA T +
Sbjct: 571 DALRDQGYDEFVRVGTEHGVREDIQEYRLESRG--DPDERAAELREASVVAATTASCGSR 628
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA------REN 1118
++ + FDV ++DEA Q T P +L + A +FVLVGDH QLPP+VQS +A E+
Sbjct: 629 IMREGSFDVAVIDEASQLTEPATLAAVALADRFVLVGDHQQLPPVVQSADAAGTVETTEH 688
Query: 1119 G--------------------------------------MEISLFRRLSEEHPQAISALQ 1140
G + SLF RL E HP+A L
Sbjct: 689 GDDSADDGTTGATTATDGSGVVASGTANGTSRTAGDVADLSRSLFERLIETHPEAAVLLD 748
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC-SPWLKEALNPCRPVIFV 1199
+QYRM Q I S+ Y RL S +IA V+DL S L + L V FV
Sbjct: 749 TQYRMAQRIQAFSSNEFYDGRLRPASPDIAAQ--HVADLPEVTSDALPDRLQ--ERVSFV 804
Query: 1200 NTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS 1259
+ D + NP E +A+I + + +DIG+I P+ +QA IR L
Sbjct: 805 DPDGTA-------RGNTNPAEVTAVAEIVEAYAAAGVAREDIGVIAPFRAQAAAIRREL- 856
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+V + T+D++QG K+ I+VSFV + + S + D+ R+NVALTRAKK L++VG
Sbjct: 857 -PAVTVDTVDRFQGSAKEVIVVSFVATG----DLDSPIFEDFRRVNVALTRAKKALVLVG 911
Query: 1320 SCRTLS 1325
L+
Sbjct: 912 DRDALA 917
>gi|322368849|ref|ZP_08043416.1| ATP-dependent DNA helicase Dna2 [Haladaptatus paucihalophilus DX253]
gi|320551580|gb|EFW93227.1| ATP-dependent DNA helicase Dna2 [Haladaptatus paucihalophilus DX253]
Length = 900
Score = 221 bits (563), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 146/407 (35%), Positives = 214/407 (52%), Gaps = 36/407 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + AKD ALI G PGTGKT T+ ++AL G +LL+++TN AVDN L
Sbjct: 510 NDAQNAAVNLAVNAKDCALIHGPPGTGKTYTIARTIRALADDGNRVLLSAFTNRAVDNAL 569
Query: 1006 IKLKSQSI---DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
L+ Q + VR+G V +++Q L + E + + L+ VVA T
Sbjct: 570 EALREQGFGEEEIVRVGTESGVREDMQDVRLERGG-DPGERVAE-LEGASVVAATTATCG 627
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS------TEAR 1116
+ ++ ++ FDV ++DEA Q T P +L + A +FVLVGDH+QLPP+VQ+ +EA
Sbjct: 628 SRIMREQAFDVALVDEASQLTEPATLAAINLAERFVLVGDHHQLPPVVQANDAEADSEAS 687
Query: 1117 ENG------MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+G + SLF+RL + +P A L QYRM Q I S+ Y L + E+A
Sbjct: 688 ADGDGAGGDLSTSLFQRLVDLYPDASVMLDRQYRMAQRIQAFSSREFYDGALRPANGEVA 747
Query: 1171 NAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKIT 1228
KI DL + P E+L P V FV+ D A NPVEA + ++
Sbjct: 748 AQKI--GDLPNVEP---ESLPPTLRTGVAFVDPDGKTAGN-------TNPVEAERVTELV 795
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+ +DIG+I P+ +Q I + SV + T+D++QG K+ I+VSFV +
Sbjct: 796 SRFANAGVAREDIGVIAPFRAQVAEISRRVH-ESVAVDTVDRFQGSSKEVIIVSFVATG- 853
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ S + D+ R+NVALTRAKK L++VG R L PL ++
Sbjct: 854 ---DLDSPIFDDYRRVNVALTRAKKSLVLVGDERALRSSPLYDRMVE 897
>gi|313126003|ref|YP_004036273.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
gi|448285843|ref|ZP_21477082.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
gi|312292368|gb|ADQ66828.1| DNA/RNA helicase, superfamily I [Halogeometricum borinquense DSM
11551]
gi|445575873|gb|ELY30336.1| DNA/RNA helicase, superfamily i [Halogeometricum borinquense DSM
11551]
Length = 902
Score = 219 bits (558), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 207/392 (52%), Gaps = 27/392 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ V+AL+ G +LL+++TN AVDN L
Sbjct: 532 NDAQNEAVKLAVDAEDFALVHGPPGTGKTYTIARIVRALVADGNRVLLSAFTNRAVDNAL 591
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQK-HCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN 1063
L+ Q D VR+G + +++Q H + + N + L VVA T +
Sbjct: 592 EALRDQGFADAVRVGTENGIREDMQDLHLKTTGDPN---DRVAELTDAPVVAATTSSCGS 648
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
++ ++ FDV ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ S
Sbjct: 649 RVMREQSFDVALVDEASQLTEPGTLAAINRADRFVLVGDHEQLPPVVRA----ENDLQQS 704
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
LF RL + P+A L QYRM Q I S+A Y L + E+A ++ SDL
Sbjct: 705 LFERLIDAAPEASVMLDRQYRMSQRIQAFSSAEFYDGALRPATGEVAAQRL--SDLGVDE 762
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L E L PV F++ + NPVEA +A++ + V +E DIG+
Sbjct: 763 SALPEPLRD--PVAFIDPN-------GSRVGNTNPVEAERVAELVETFVAAGVEPDDIGV 813
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I P+ +Q I V+ + T+D++QG K+ ++VSFV S + D R
Sbjct: 814 IAPFRAQVAEIGKRTDVT---VDTVDRFQGSSKEVVIVSFVASG----TLDGPIFEDHRR 866
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
INVALTRAKK L++VG L P ++
Sbjct: 867 INVALTRAKKSLVLVGDANALESDPFYARMLE 898
>gi|448414192|ref|ZP_21577331.1| DNA/RNA helicase, superfamily i [Halosarcina pallida JCM 14848]
gi|445682485|gb|ELZ34902.1| DNA/RNA helicase, superfamily i [Halosarcina pallida JCM 14848]
Length = 908
Score = 218 bits (556), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 213/408 (52%), Gaps = 29/408 (7%)
Query: 932 QDPALSYIWSEKSL--NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
+DPA + +E + N+ Q RA+ + A D AL+ G PGTGKT T+ V+AL+ G
Sbjct: 522 RDPAFADRSAETYIDNNEAQNRAVRLAVDADDAALVHGPPGTGKTYTIARTVRALVDEGQ 581
Query: 990 SILLTSYTNSAVDNLLIKLKSQSI-DFVRIGRHEVVHKE-IQKHCLSAMNINSVEEIKKR 1047
+LL+++TN AVDN L L+ Q D +R+G + ++ + H +A + N +
Sbjct: 582 RVLLSAFTNRAVDNALEALREQGFEDAIRVGTENGIREDMLDLHLETAGDPN---DRAAE 638
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
L+ VVA T + ++ ++ FDV ++DEA Q T P +L + A +FVLVGDH QLP
Sbjct: 639 LNDAPVVAATTSSCGSRMMREQSFDVALVDEASQLTEPGTLAAVNLAERFVLVGDHQQLP 698
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P+V++ EN ++ SLF RL + +P+A L QYRM Q I S+A Y L
Sbjct: 699 PVVRA----ENDLQESLFERLIDRYPEASVMLDRQYRMSQRIQAFSSAEFYDGALRPADG 754
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
+A ++ SDL L E L PV FV+ D NP EA +A+I
Sbjct: 755 AVAAQRL--SDLGVAESALPEELRD--PVAFVDPD-------GSRVGNTNPTEADRVAEI 803
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
V ++ D+G+I P+ +Q I V+ + T+D++QG K+ +LVSFV +
Sbjct: 804 VDAYVAAGVDPDDVGVIAPFRAQVAEISKRTDVT---VDTVDRFQGSSKEVVLVSFVATG 860
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ D R+NVALTRAKK L++VG L P +++
Sbjct: 861 ----ALDGPIFEDHRRVNVALTRAKKALVLVGDADALGSDPFYARMLH 904
>gi|448737514|ref|ZP_21719554.1| DNA replication factor Dna2 [Halococcus thailandensis JCM 13552]
gi|445803658|gb|EMA53941.1| DNA replication factor Dna2 [Halococcus thailandensis JCM 13552]
Length = 922
Score = 218 bits (555), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 218/419 (52%), Gaps = 59/419 (14%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + A D ALI G PGTGKT T+ A++AL+ RG +LL+++TN AVDN L
Sbjct: 511 NPAQDRAVRMAVGADDCALIHGPPGTGKTYTIARAIRALVDRGERVLLSAFTNRAVDNAL 570
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q +FVR+G V +++Q H L + E + L + VVA T +
Sbjct: 571 EALEEQGFTEFVRVGTESGVREDMQDHRLESRG--DPEARARELREAPVVAATTASCGSR 628
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE---------- 1114
+L + +FDV ++DEAGQ T P +L L A +FVLVGDH QLPP+VQS +
Sbjct: 629 VLRETEFDVALVDEAGQLTEPATLAALALADRFVLVGDHQQLPPVVQSADTASDGTSASD 688
Query: 1115 ----ARENG----------------------MEISLFRRLSEEHPQAISALQSQYRMCQG 1148
AR +G + SLF RL++EHP A L +QYRM Q
Sbjct: 689 DSAAARSDGGHADVQQPIEPSPSGGSGRAADLSRSLFERLADEHPDASVLLDTQYRMAQR 748
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL-NPCR-PVIFVNTDMLPA 1206
I S+ Y L S +A VSDLS+ +AL +P R V FV+ D
Sbjct: 749 IQAYSSQEFYDGALRPASGAVAAQ--HVSDLSTVD---ADALPDPLRNRVAFVDPDGTA- 802
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIH 1266
+ NP E I ++ + V+ + ++IG+I P+ +QA IR + +V +
Sbjct: 803 ------RGNTNPAEVTAITELVERAVEAGVPREEIGVIAPFRAQAAAIRR--EIPAVTVD 854
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
T+D++QG K+ ++VSFV + + S + D R+NVALTRAKK L++VG L+
Sbjct: 855 TVDRFQGSAKEVVIVSFVATG----DLDSPIFEDHRRVNVALTRAKKALVLVGDENALA 909
>gi|448666614|ref|ZP_21685259.1| DNA helicase [Haloarcula amylolytica JCM 13557]
gi|445771745|gb|EMA22801.1| DNA helicase [Haloarcula amylolytica JCM 13557]
Length = 930
Score = 218 bits (554), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 146/404 (36%), Positives = 202/404 (50%), Gaps = 49/404 (12%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM------------------- 986
N Q A+ + A+D+AL+ G PGTGKT T+ V+AL+
Sbjct: 538 NAAQNEAVQLAVGAEDFALVHGPPGTGKTYTLARMVRALVEGAGQRPAEQASGEQGDPRD 597
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
RG +LL+++TN AVDNLL L+ Q D VR+G V +++QK+ L E
Sbjct: 598 RGDRVLLSAFTNRAVDNLLEALEDQGYTDIVRVGTKSGVREDMQKYRLETSGDPG--ECA 655
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
RL +VVA T L ++FDV ++DEAGQ T P +L A +FVLVGDH Q
Sbjct: 656 SRLQSAQVVAATTATCGGSTLQTQEFDVAVVDEAGQLTEPGTLAATTLADRFVLVGDHQQ 715
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
LPP+VQS + + SLF RL + HP A L QYRM Q I ++ Y +L
Sbjct: 716 LPPVVQS---EDETLTTSLFERLIDAHPDAGVMLDRQYRMAQHIQAFASREFYDGQLRPA 772
Query: 1166 SDEIANAKIKVSD---LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-NPVEA 1221
+ E+A ++ D +S WL++ V FV+ D Q N NP EA
Sbjct: 773 TGEVAAQRLDDLDGVSTASLPEWLRDR------VAFVDPD--------GSQVGNTNPDEA 818
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILV 1281
IA I + DIG+I PY +Q I L V + T+D++QG K+ I++
Sbjct: 819 DRIADIVASYRSAGVPADDIGVIAPYRAQVAEISKRL--PDVTVDTVDRFQGSSKEVIVI 876
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
SFV + S + D+ RINVALTRAKK L++VG L+
Sbjct: 877 SFVATG----TLDSPIFEDYRRINVALTRAKKALVLVGDGDALA 916
Score = 52.8 bits (125), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 116/298 (38%), Gaps = 57/298 (19%)
Query: 401 SGEERAVHLWEDWFH--TVIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVS 454
+GE V LW W VI G + V E+ + + VG + L+V PD LV
Sbjct: 39 AGEPTTVTLWGKWTENAAVIETGMEIAVYNPDEREYRGEQQYSVGGDAT-LVVQPDFLVD 97
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + A CPR L +L +E + + GT++H++F L E+
Sbjct: 98 VTDIRAWVQCPRMYYL-RKLDGAEHAYPLVKGTVVHEVFGDLLRGRDLDTAIEEQVDAAG 156
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
L + G +++ + + + W+ Q T T ++ S
Sbjct: 157 LDIGL-----LGREADEVAGDVRDHASAIQGWL-----QQGTLTETDEW---------RS 197
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E+T I E ++G+KG DA R GM P+E KTGK + + +
Sbjct: 198 EMTLISE-----RFGMKGRADAVRR-----------GM--PVELKTGKNTKREPRFQDKI 239
Query: 635 QVILYTLLMSERYL-------KHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y L++ ER D+G L Y T+ V R++ G + EF+
Sbjct: 240 QATAYALMLGERAAGAGSAVDAAPDTGTLLY-----TKNAAVDRNEESGDLSPAKEFS 292
>gi|76802113|ref|YP_327121.1| helicase [Natronomonas pharaonis DSM 2160]
gi|76557978|emb|CAI49563.1| ATP-dependent DNA helicase Dna2 [Natronomonas pharaonis DSM 2160]
Length = 883
Score = 217 bits (553), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 141/398 (35%), Positives = 216/398 (54%), Gaps = 31/398 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + L A+D+ALI G PGTGKT T+ V+AL+ RG +LL+++TN AVDN +
Sbjct: 512 NESQNEAVNRALAAEDFALIHGPPGTGKTYTLAQTVQALVARGDRVLLSAFTNRAVDNAI 571
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L++Q D +R G V ++Q + E L +VVA T +
Sbjct: 572 EALEAQGFTDVLRWGSESGVRDDMQSYRFD--RTGDPRERAAALRDAQVVAATTAACGSR 629
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L ++FDV ++DEAGQ T P + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 630 ALKQQQFDVAVIDEAGQLTEPGTFLATNRADRFVLVGDHEQLPPVVRA----ENDLQTSL 685
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN---AKIKVSDLSS 1181
F +L +++P A L QYRM Q I ++ Y +L + E+A+ A + D+S+
Sbjct: 686 FEQLIDDYPDAAVMLDRQYRMSQRIQYFASREFYDGQLRPANAEVASQRLADLDGVDVST 745
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
L++A++ FV+ P A + NP EA +A I + ++ DI
Sbjct: 746 LPSALRDAVS------FVD----PGGSADGN---TNPTEADRVADIVSAYLDAGVDPDDI 792
Query: 1242 GIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
G+I P+ +Q A L R + V + T+D++QG K+ I+VSFV + E +S + D
Sbjct: 793 GVIAPFRAQVAELSRR---IDEVTVDTVDRFQGSSKEVIIVSFVATGE----LSSPIFED 845
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
+ R+NVALTRAKK L++VG L VP + ++ G
Sbjct: 846 YRRVNVALTRAKKALVLVGDATALRSVPFYERMLEWAG 883
>gi|448452871|ref|ZP_21593544.1| DNA replication factor Dna2 [Halorubrum litoreum JCM 13561]
gi|445808422|gb|EMA58492.1| DNA replication factor Dna2 [Halorubrum litoreum JCM 13561]
Length = 898
Score = 217 bits (552), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 260/978 (26%), Positives = 416/978 (42%), Gaps = 162/978 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ M+ A V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLR---GMELEASVADRVA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G +++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETDEVEDEVRRNAAAVEGWLAQ--------------GTLADEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
T I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FTLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R ++F +++ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAER----DYFDRFYTAL----EEERRETHAEYRKLWE------QTPAE 389
Query: 803 NASDGDSLIG----AAIPTKDMDCTLRS---GDYVILSTESDRLAVAS-----------G 844
A+D +LI A D LR+ GD V E D +A+AS G
Sbjct: 390 RAADDRALIDLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
ITE+ + V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITELGKDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHD 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ R+ ++ P F + D +YI + S N+ A+ + A+D A
Sbjct: 490 AVLKGEPDRKDVLFGRREPEFRDAADRPADAPGAYIDNNASQNE----AVELAVDAEDLA 545
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHE 1022
LI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G
Sbjct: 546 LIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDVLRVGTET 605
Query: 1023 VVHKEIQKHCL---SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
V ++Q L N + E L VVA T + ++ + +FDV ++DEA
Sbjct: 606 GVRGDMQDVRLVQRGEPNAKAAE-----LRDTPVVAATTAACGSRVMRECEFDVALVDEA 660
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L
Sbjct: 661 SQLTEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIERYPDASVML 716
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--CRPVI 1197
QYRM Q I ++A Y L + E+A + +DL P +AL P V
Sbjct: 717 DRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPELTGGVG 770
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
FV+ D + N EA +A + V ++ D+G+I P+ +Q I
Sbjct: 771 FVDPD-------GERDGNRNVREAERVAAVVDAYVAAGVDPDDVGVIAPFRAQVAEIGRR 823
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
V+ + T+D++QG K+ ILVSFV + + + D R+NVALTRAKK+L +
Sbjct: 824 TDVT---VDTVDRFQGSSKEVILVSFVATG----DLDGPIFEDHRRVNVALTRAKKQLTI 876
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG L P +++
Sbjct: 877 VGDADALGSDPFYARMLD 894
>gi|392410914|ref|YP_006447521.1| Flavivirus DEAD domain/DNA replication factor Dna2 [Desulfomonile
tiedjei DSM 6799]
gi|390624050|gb|AFM25257.1| Flavivirus DEAD domain/DNA replication factor Dna2 [Desulfomonile
tiedjei DSM 6799]
Length = 990
Score = 216 bits (551), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 144/414 (34%), Positives = 225/414 (54%), Gaps = 36/414 (8%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q A+ + L + + LI G PGTGKT + ++ L RG +L+ TN A+D
Sbjct: 582 SLNERQESAVQEALGCQTFHLIHGPPGTGKTRVLARLIRKCLERGERVLVACPTNVALDR 641
Query: 1004 LLIKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSV-----------EEIKKRLDQV 1051
LL+ L + +F+RIG V KE + N ++ + KKR+ +
Sbjct: 642 LLLALIDLDVRNFLRIGGRFNVSKEFVRALELTHNTTALFQELASKEHDFKAFKKRVTET 701
Query: 1052 KVVAVTCLGIT-NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL- 1109
++V T T +P+ +KFD ++DEAGQ P +LGP+ A KF+L GDH QLPP+
Sbjct: 702 QLVGATAYQCTAHPVFLRQKFDRVVVDEAGQLDEPSTLGPISMAPKFILGGDHLQLPPVV 761
Query: 1110 -VQSTEARENG--MEISLFRRLSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
VQ+ + G +E SLF RL +E Q +S+L+ QYRM I + + L Y L
Sbjct: 762 KVQNQDPTSEGALLERSLFERLFDEADRQRVSSLEIQYRMNTEIQNIPSRLFYQGLLK-P 820
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIA 1225
S E A ++K+ +S P + ++P RPV+FV+ D +A+ P EA +
Sbjct: 821 SQEAATRRLKLDLTNSRDPRVNRIIDPERPVVFVDIDGAENSKAR-------PEEAEIAC 873
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLS-----VSSVEIHTIDKYQGRDKDCIL 1280
+IT+ LV + + +IGIITPY +Q +LIR L+ +SS+ T+D +QG +++ I+
Sbjct: 874 RITETLVNSGMAPHEIGIITPYRAQQSLIRRKLASGGSHISSLSADTVDSFQGGEREVII 933
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+S RS + ++ L D R+NV+L+RA+ KLI++G L + PL L+
Sbjct: 934 LSLARS-----DSVTTFLADKKRLNVSLSRARSKLILLGHGPVLREHPLFAELL 982
Score = 42.0 bits (97), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 45/220 (20%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRSVLDERLKCS-ERSISALLGTLLHQIFQAGLMK-EIP 502
L++ P +VS T + +C R + D R + E G L+H +F+ L + P
Sbjct: 96 LVLEPCRVVSVTEAVEAAACIRSA--DVRFRVGPEEPFWMAKGKLIHTLFEHLLARLGEP 153
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA-----IPKMLNWIILFKDSQDLN 557
+ + +E R L + L + IH +EA + +W+ N
Sbjct: 154 SERTFQEAFRKALPSLVSVLPGSDIK---IHLKSLEAEARTHFSNIKSWL-------KRN 203
Query: 558 TPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLE 617
+P+ D+ + ++ + ++GLKG DA +R E N +L E
Sbjct: 204 SPSFDYAEVEMDRMSV-------------RWGLKGRADAILR-------REDNSTVL--E 241
Query: 618 FKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLY 657
K+GK+P +H Q+ Y+L+ SE ++ + +LY
Sbjct: 242 LKSGKVPVD----DHLLQLCAYSLIFSENSPRNSEGYILY 277
>gi|312376914|gb|EFR23870.1| hypothetical protein AND_11944 [Anopheles darlingi]
Length = 715
Score = 216 bits (549), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 243/468 (51%), Gaps = 74/468 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
++LN Q+ A++K + Y L+ G+PGTGKT T+V ++ L G +ILLTS T+SAVD
Sbjct: 225 QNLNRHQKIAVLKAAATESYCLLKGLPGTGKTQTIVGIIRILFALGKTILLTSNTHSAVD 284
Query: 1003 NLLIKLKS-QSIDFVRIGRHEVVHKEIQ--KHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
N+L +L S + + F+R+G E + I+ + A ++ E++ K D+ K+VAVTC
Sbjct: 285 NVLKRLASLEELKFIRLGTLERIDPAIRFSSAVVMAEQCDTPEKLAKLYDEFKIVAVTCQ 344
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G +PL+ +KFD CI+DEA Q + PL+ +F+LVGD QLPP+V+S EAR G
Sbjct: 345 GAAHPLIAQRKFDYCIVDEATQVFQSSIIRPLLQCKRFLLVGDPEQLPPVVKSNEARAVG 404
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL +E I L +QYRM + + +L+N Y +L CG+D +AN +K+ L
Sbjct: 405 GDESLFHRLDQEGAYCI--LPTQYRMNRVLTKLANDFTYDGKLVCGNDVVANNTLKLPQL 462
Query: 1180 SS------CSPWLKEALNPCRPVIFVNTD------MLPAYEAKDHQTLN----------- 1216
S+ WL + ++ + V D + +++ D Q N
Sbjct: 463 STLRQMYEVERWLLKTISNQIDLSAVVLDTGYTGQLNDSFQLSDDQHFNLGHERNSKGFL 522
Query: 1217 ---NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR------------------ 1255
N E L I L++ ++ K IGI+ P+ +Q +LIR
Sbjct: 523 NCINLAEVALTIYICGALLRAGVDSKSIGIMAPFRAQVDLIRHHMQGLLQKHKSTRLPLS 582
Query: 1256 ---------------HSLSVSSVEIHTIDKYQGRDKDCILV---SFVRSSEN---PRNCT 1294
HSL +EI+T+D++QG+DK + S + +E+ P
Sbjct: 583 GAVQSPIKPDKSMEAHSLDECDIEINTVDQFQGKDKKTATMASDSVKQEAEDIVQPSAMN 642
Query: 1295 SS-LLGDWHRINVALTRAKKKLIMVGSCRTL-SKVPLLKL--LINKVG 1338
S+ +L D R+ VA+TRA+ KLI++G + L + P KL +I K+G
Sbjct: 643 SNEILFDKRRLTVAITRAQVKLIVLGDRQCLDAYTPFSKLFKVIPKIG 690
Score = 67.4 bits (163), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 89/185 (48%), Gaps = 24/185 (12%)
Query: 485 LGTLLHQIFQAGLMKEIPTMKFLEEYARL----VLQKN-IESLYACGVNENDIHKTL--- 536
+GTL+H +FQ L LE+ R+ + N + +LYA G++ +D +
Sbjct: 32 IGTLVHSVFQQCLTDN--NCCSLEDIRRIADSWIKSPNMVSTLYAYGISSDDALTAMSPY 89
Query: 537 VEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDA 596
E I K L ++ KD + +F KI + DIEE W + G+KG ID
Sbjct: 90 FEEIDKFLRKYLINKDKRREIAVEPEF--------KIQSIQDIEENIWCHQLGIKGKIDV 141
Query: 597 SIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKH-IDSGL 655
++ V + + I+PLE KTG+ S EH Q++LY ++M+ + H + GL
Sbjct: 142 TVSVVRSDGKGDPVPEIMPLELKTGR---ASYSFEHVGQLVLYEMMMN--LVGHRVGGGL 196
Query: 656 LYYLQ 660
L YL+
Sbjct: 197 LLYLR 201
>gi|448518588|ref|ZP_21617665.1| DNA replication factor Dna2 [Halorubrum distributum JCM 10118]
gi|445705169|gb|ELZ57073.1| DNA replication factor Dna2 [Halorubrum distributum JCM 10118]
Length = 898
Score = 216 bits (549), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 255/975 (26%), Positives = 413/975 (42%), Gaps = 156/975 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ M+ A V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLR---GMELEASVADRVA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G +++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETDEVEDEVRRNAAAVEGWLAQ--------------GTLADEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
T I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FTLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R ++F +++ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAER----DYFDRFYTAL----EEERRETHAEYRKLWE------QTPAE 389
Query: 803 NASDGDSLIG----AAIPTKDMDCTLRS---GDYVILSTESDRLAVAS-----------G 844
A+D +LI A D LR+ GD V E D +A+AS G
Sbjct: 390 RAADDRALIDLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
ITE+ + V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITELGKDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHD 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ R+ ++ P F + D +YI + S N+ A+ + A+D A
Sbjct: 490 AVLKGEPDRKDVLFGRREPEFRDAADRPADAPGAYIDNNASQNE----AVELAVDAEDLA 545
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHE 1022
LI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G
Sbjct: 546 LIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDVLRVGTET 605
Query: 1023 VVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
V ++Q L + + + R V G + ++ + +FDV ++DEA Q
Sbjct: 606 GVRGDMQDVRLVQRGEPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVALVDEASQL 663
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L Q
Sbjct: 664 TEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIERYPDASVMLDRQ 719
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--CRPVIFVN 1200
YRM Q I ++A Y L + E+A + +DL P +AL P V FV+
Sbjct: 720 YRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPELTGGVGFVD 773
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV 1260
D + N EA + + V ++ D+G+I P+ +Q I V
Sbjct: 774 PD-------GERDGNRNVREAERVTAVVDAYVAAGVDPDDVGVIAPFRAQVAEIGRRTDV 826
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+ + T+D++QG K+ ILVSFV + + + D R+NVALTRAKK+L +VG
Sbjct: 827 T---VDTVDRFQGSSKEVILVSFVATG----DLDGPIFEDHRRVNVALTRAKKQLTIVGD 879
Query: 1321 CRTLSKVPLLKLLIN 1335
L P +++
Sbjct: 880 ADALGSDPFYARMLD 894
>gi|169236231|ref|YP_001689431.1| helicase [Halobacterium salinarum R1]
gi|167727297|emb|CAP14083.1| ATP-dependent DNA helicase Dna2 [Halobacterium salinarum R1]
Length = 878
Score = 216 bits (549), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 253/981 (25%), Positives = 410/981 (41%), Gaps = 174/981 (17%)
Query: 394 LRLLNEQSGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
+R+ + E V LW W T + G + V +D G +++++V P+
Sbjct: 28 VRVRPDPGAEPVPVSLWGKWTETATYLDAGMELAVHDATED-GAGYATAASSWVVVEPEF 86
Query: 452 LVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYA 511
+V T + + CPR L+ +L GT++H++F
Sbjct: 87 VVDVTDIRSFVQCPRLYYLN-KLSGLPLKYPVTKGTIVHEVF-----------------G 128
Query: 512 RLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKL 571
L+ +++E+ A V+E + L L + ++ D S L
Sbjct: 129 DLLRGRDLEASVAQRVDEAGLELGL------------LGRSRAEVEADVRDNASAIEGWL 176
Query: 572 KISEVTDIEEMAWAPKY-------GLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIP 624
+ +TD +E W +Y G+KG DA R GM P+E KTGK
Sbjct: 177 QQGRLTDEDE--WRSEYTLVSERFGIKGRCDAIRR-----------GM--PVELKTGKNT 221
Query: 625 NGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
N + + Q Y L++ E + D+G L Y T+ V RS+ G + EF
Sbjct: 222 NREPRFHDKVQAACYALMLDEHGVP-ADTGTLLY-----TKNAAVDRSEASGDLSPAKEF 275
Query: 685 A------------NDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFL 732
+ + + A PP Y + +C F+ + +
Sbjct: 276 SIGRGFLEFVVRERNHLAALEASDGPPT--GYEADAKCD---YCFEQDTCMVVSGRLDQE 330
Query: 733 RHWDRLIDLEAKEMQVVKNEIW----CSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRF 788
R+ D E + +E++ RG+ + + + + S + + + D+R
Sbjct: 331 SKAGRIGDPVPAEERAYFDELYDAIEAERGAIHDEY-----RKLWEQSPDERAA--DDRA 383
Query: 789 VYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGL--I 846
V P+ DG + A P +R GD V L+++ D +A + + +
Sbjct: 384 VVGL----SPAEQTELPDGRWRLTATRPGSAA-SKIREGDRV-LASDGDPVAGRAEMARV 437
Query: 847 TEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQS 906
+ V V+ +P+ L R+D S M L L+S
Sbjct: 438 ERLDADRVEVTTDEPVSL----------------CRLDVYPSELSVDRMLTALHDAVLKS 481
Query: 907 AQSSQLRR--MIVDLEAPRFDSGSVFSQDPALSYIWSEKSL---NDDQRRAIIKVLTAKD 961
Q RR ++ D +PRF+ G + L ND Q A+ + L A+D
Sbjct: 482 DQ----RRTDLLFDRASPRFEGG--------------DHDLIPNNDAQNAAVNRALNAED 523
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS-IDFVRIGR 1020
+AL+ G PGTGKT T+ V+A + RG +L++++TN AVDN L L+ Q D VR+G
Sbjct: 524 FALVHGPPGTGKTYTIATLVQAFVARGDRVLVSAFTNRAVDNALDALRQQGHEDIVRVGT 583
Query: 1021 HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
V ++Q L E L VVA T + +L + +FDV ++DEA
Sbjct: 584 ETGVRADMQDLRLD--RSGDPGERAAALRSAPVVAATTATCGSRILRELEFDVVLVDEAS 641
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q T P +L + ++FVLVGDH QLPP+V+S + SLF RL E +P+A L
Sbjct: 642 QLTEPDTLAAINRGARFVLVGDHEQLPPVVRSG----GRLSKSLFERLHETYPEASVMLD 697
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP----V 1196
QYRM Q I S+ Y +L S E+A ++ +D+ ++P V
Sbjct: 698 QQYRMSQRIQAFSSREFYDGQLRPASSEVAGQRL--TDV---------GVDPGGAVHGGV 746
Query: 1197 IFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
F + +P + +P EA +A + V ++ +IG+I P+ +Q I
Sbjct: 747 TFYD---VPGTD----DAHVDPAEADRVADVVTAYVDAGLDPGEIGVIAPFRAQVAEIGR 799
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVALTRAKKK 1314
+ + V + T+D++QG K+ I+VSFV E P + D R+NVAL+RAKK
Sbjct: 800 R-TPAGVAVDTVDRFQGSSKEVIVVSFVARGTLEGP------IFEDHRRVNVALSRAKKS 852
Query: 1315 LIMVGSCRTLSKVPLLKLLIN 1335
L++VG R L PL +I+
Sbjct: 853 LVLVGDERALRSEPLYDRMID 873
>gi|448507880|ref|ZP_21615180.1| DNA replication factor Dna2 [Halorubrum distributum JCM 9100]
gi|445697817|gb|ELZ49874.1| DNA replication factor Dna2 [Halorubrum distributum JCM 9100]
Length = 898
Score = 215 bits (548), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 255/975 (26%), Positives = 413/975 (42%), Gaps = 156/975 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHADPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ M+ A V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLR---GMELEASVADRVA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G +++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETDEVEDEVRRNAAAVEGWLAQ--------------GTLADEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
T I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FTLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R ++F +++ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAER----DYFDRFYTAL----EEERRETHAEYRKLWE------QTPAE 389
Query: 803 NASDGDSLIG----AAIPTKDMDCTLRS---GDYVILSTESDRLAVAS-----------G 844
A+D +LI A D LR+ GD V E D +A+AS G
Sbjct: 390 RAADDRALIDLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
ITE+ + V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITELGKDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHD 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ R+ ++ P F + D +YI + S N+ A+ + A+D A
Sbjct: 490 AVLKGEPDRKDVLFGRREPEFRDAADRPADAPGAYIDNNASQNE----AVELAVDAEDLA 545
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHE 1022
LI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G
Sbjct: 546 LIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDVLRVGTET 605
Query: 1023 VVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
V ++Q L + + + R V G + ++ + +FDV ++DEA Q
Sbjct: 606 GVRGDMQDVRLVQRGEPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVALVDEASQL 663
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L Q
Sbjct: 664 TEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIERYPDASVMLDRQ 719
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--CRPVIFVN 1200
YRM Q I ++A Y L + E+A + +DL P +AL P V FV+
Sbjct: 720 YRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPELTGGVGFVD 773
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV 1260
D + N EA + + V ++ D+G+I P+ +Q I V
Sbjct: 774 PD-------GERDGNRNVREAERVTAVVDAYVAAGVDPDDVGVIAPFRAQVAEIGRRTDV 826
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+ + T+D++QG K+ ILVSFV + + + D R+NVALTRAKK+L +VG
Sbjct: 827 T---VDTVDRFQGSSKEVILVSFVATG----DLDGPIFEDHRRVNVALTRAKKQLTIVGD 879
Query: 1321 CRTLSKVPLLKLLIN 1335
L P +++
Sbjct: 880 ADALGSDPFYARMLD 894
>gi|335438999|ref|ZP_08561724.1| DNA replication factor Dna2 [Halorhabdus tiamatea SARL4B]
gi|334889306|gb|EGM27594.1| DNA replication factor Dna2 [Halorhabdus tiamatea SARL4B]
Length = 902
Score = 215 bits (547), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 206/392 (52%), Gaps = 35/392 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + + A+D+ALI G PGTGKT T+ V AL+ RG +LL+++TN AVDN +
Sbjct: 521 NPAQDRAVRRAVGAEDFALIHGPPGTGKTYTLATLVDALVERGERVLLSAFTNRAVDNAV 580
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L Q ++ VR+G V +++Q L +E L VVA T +
Sbjct: 581 EALLEQGVEGVVRMGTETGVREDLQHVRLDPA--GDPDERAAELTDAPVVAATTATCGSR 638
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA---RENGME 1121
++ ++ FDV ++DEAGQ T P +L + A +FVLVGDH QLPP+V++ + RE +
Sbjct: 639 IMREQDFDVAVIDEAGQLTEPGALAAVARAERFVLVGDHRQLPPVVRAADEVRDREGAAD 698
Query: 1122 I--SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP A L QYRM Q I S+ Y +L + EIA + +DL
Sbjct: 699 LSQSLFERLIDAHPDAGVLLDRQYRMAQRIQAYSSTEFYDGQLRPATGEIAGQTL--ADL 756
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIE 1237
P R V F++ D Q + NP EA +A+ + + ++
Sbjct: 757 DGVDPAALPTHLQGR-VTFLD---------PDGQAVGNTNPDEAAAVAETVESYLTAGVD 806
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
D+G+I PY +Q I + V + T+D++QG K+ +LVSFV T SL
Sbjct: 807 PGDVGVIAPYRAQVAEIGQRVP-DGVTVDTVDRFQGSSKEVVLVSFV--------ATGSL 857
Query: 1298 LG----DWHRINVALTRAKKKLIMVGSCRTLS 1325
G D+ RINVALTRAK+ L+++G LS
Sbjct: 858 DGPIFEDYRRINVALTRAKRALVLIGDAEALS 889
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 118/285 (41%), Gaps = 41/285 (14%)
Query: 407 VHLWEDWFHT--VIAPGDTVNVIG----EFDDQGKCDVGRENNFLIVHPDVLVSGTRVAA 460
V LW W T ++ G V V E+ + + G E+ ++V PD +V T V +
Sbjct: 42 VTLWGKWTETADILEAGMDVAVYDAEEREYRGETQYTTG-EDAMVVVEPDFIVDVTDVRS 100
Query: 461 SFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIE 520
CPR L+ +L + + + GT++H++F L E A + L+ +
Sbjct: 101 WVQCPRMYYLN-KLSGTPLAYPVVKGTIVHEVFGDLLRGRDVEDAVAERVAEVGLELGLL 159
Query: 521 SLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVTDIE 580
A V E+ + AI L L Q PT DG + SE T I
Sbjct: 160 GRDAETVREDALDH--ASAIEGWLQQGHLTDGGQTTFGPT-----DGEWR---SEQTLIS 209
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYT 640
+ +YGLKG DA R GM P+E KTGK N + + + Q Y
Sbjct: 210 Q-----RYGLKGRADAVRR-----------GM--PVELKTGKNTNREPRFQDKIQAAAYA 251
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
L++ E + ++G L Y T+ V+R++ G + EF+
Sbjct: 252 LVLGEHGEEPPNTGTLLY-----TKNAAVERTEAGGDLSPAKEFS 291
>gi|345005401|ref|YP_004808254.1| CRISPR-associated protein Cas4 [halophilic archaeon DL31]
gi|344321027|gb|AEN05881.1| CRISPR-associated protein Cas4 [halophilic archaeon DL31]
Length = 925
Score = 213 bits (542), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 213/416 (51%), Gaps = 47/416 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ A+++AL+ G PGTGKT T+ V+AL+ +G +LL+++TN AVDN L
Sbjct: 525 NDAQNEAVNLATRAEEFALVHGPPGTGKTYTIARTVRALVEQGNRVLLSAFTNRAVDNAL 584
Query: 1006 IKLKSQ----------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
++ Q S D VR G V ++Q L + E I + L
Sbjct: 585 EAVRDQGFEDSAERSSAGSRTVSGDAVRFGTESGVRADMQDLRLERAG-DPGERISE-LK 642
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
Q +VA T + ++ +++FDV I+DEA Q T P +L + A +FVLVGDH QLPP+
Sbjct: 643 QAPLVAATTASCGSRIMREERFDVAIVDEASQLTEPATLAAINLADRFVLVGDHEQLPPV 702
Query: 1110 VQS------TEARENGMEI----SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
V++ T RE G ++ SLF RL ++ P A L QYRM Q I S+ Y
Sbjct: 703 VRAEGGDSWTPGREGGEDVDLATSLFERLHKQAPAASVMLDRQYRMAQRIQAFSSREFYD 762
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
+L + E+A +I DL P L EAL PV FV+ D NP
Sbjct: 763 GQLRPATPEVAAQQI--GDLPGVDPSKLPEALRD--PVAFVDPD-------GQRVGNTNP 811
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
EA +A++ + + + +DIG+I P+ +Q I + + + T+D++QG K+
Sbjct: 812 TEADRVAELVAQFREAGVAVEDIGVIAPFRAQVAEISRRTNAT---VDTVDRFQGSSKEV 868
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
I+VSFV + + + + D R+NVALTRAKK L++VG L P + L+
Sbjct: 869 IIVSFVATG----DLSGPIYDDPRRMNVALTRAKKSLVLVGDADALGAEPFYQRLL 920
Score = 48.1 bits (113), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 97/251 (38%), Gaps = 58/251 (23%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEI 501
++++++ P LV T V + CPR L+ +L + GT++H++F ++
Sbjct: 79 DSWVVLEPAFLVDVTDVRSWVQCPRMYYLN-KLSGVPLKYPVVKGTIVHEVF-----GDL 132
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
+ LEE + + L A G + + + + W LN T+
Sbjct: 133 LRGRGLEESIDQRVSEAGLELGALGYDREEAEDEVRRNAAAIEGW---------LNQGTL 183
Query: 562 DFGSDGLKKLKISEVTDIEEMAW-------APKYGLKGMIDASIRVKIESKRNEINGMIL 614
EE +W +P +G+KG DA R GM
Sbjct: 184 -----------------TEEDSWRSEYTLISPTFGIKGRADALRR-----------GM-- 213
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
P+E KTGK + + + Q Y LL+ ER + D+G L Y T+ + R D
Sbjct: 214 PVELKTGKNTKREPRFQDKMQAACYALLLEERGV-DADTGTLLY-----TKNTALDRGDE 267
Query: 675 VGLIMRRNEFA 685
G + EF+
Sbjct: 268 TGDLSPAKEFS 278
>gi|15790495|ref|NP_280319.1| DNA helicase [Halobacterium sp. NRC-1]
gi|10580995|gb|AAG19799.1| DNA helicase [Halobacterium sp. NRC-1]
Length = 821
Score = 213 bits (541), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 242/931 (25%), Positives = 393/931 (42%), Gaps = 171/931 (18%)
Query: 442 NNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEI 501
+++++V P+ +V T + + CPR L+ +L GT++H++F
Sbjct: 20 SSWVVVEPEFVVDVTDIRSFVQCPRLYYLN-KLSGLPLKYPVTKGTIVHEVF-------- 70
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTV 561
L+ +++E+ A V+E + L L + ++
Sbjct: 71 ---------GDLLRGRDLEASVAQRVDEAGLELGL------------LGRSRAEVEADVR 109
Query: 562 DFGSDGLKKLKISEVTDIEEMAWAPKY-------GLKGMIDASIRVKIESKRNEINGMIL 614
D S L+ +TD +E W +Y G+KG DA R GM
Sbjct: 110 DNASAIEGWLQQGRLTDEDE--WRSEYTLVSERFGIKGRCDAIRR-----------GM-- 154
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
P+E KTGK N + + Q Y L++ E + D+G L Y T+ V RS+
Sbjct: 155 PVELKTGKNTNREPRFHDKVQAACYALMLDEHGVP-ADTGTLLY-----TKNAAVDRSEA 208
Query: 675 VGLIMRRNEFA------------NDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIY 722
G + EF+ + + A PP Y + +C F+
Sbjct: 209 SGDLSPAKEFSIGRGFLEFVVRERNHLAALEASDGPPT--GYEADAKCD---YCFEQDTC 263
Query: 723 HLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW----CSRGSGGNHFTGCLSSIVLDASNE 778
+ + R+ D E + +E++ RG+ + + + + S +
Sbjct: 264 MVVSGRLDQESKAGRIGDPVPAEERAYFDELYDAIEAERGAIHDEY-----RKLWEQSPD 318
Query: 779 HQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDR 838
+ + D+R V P+ DG + A P +R GD V L+++ D
Sbjct: 319 ERAA--DDRAVVGL----SPAEQTELPDGRWRLTATRPGSAA-SKIREGDRV-LASDGDP 370
Query: 839 LAVASGL--ITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMR 896
+A + + + + V V+ +P+ L R+D S M
Sbjct: 371 VAGRAEMARVERLDADRVEVTTDEPVSL----------------CRLDVYPSELSVDRML 414
Query: 897 YNLVQLFLQSAQSSQLRR--MIVDLEAPRFDSGSVFSQDPALSYIWSEKSL---NDDQRR 951
L L+S Q RR ++ D +PRF+ G + L ND Q
Sbjct: 415 TALHDAVLKSDQ----RRTDLLFDRASPRFEGG--------------DHDLIPNNDAQNA 456
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ + L A+D+AL+ G PGTGKT T+ V+A + RG +L++++TN AVDN L L+ Q
Sbjct: 457 AVNRALNAEDFALVHGPPGTGKTYTIATLVQAFVARGDRVLVSAFTNRAVDNALDALRQQ 516
Query: 1012 S-IDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKK 1070
D VR+G V ++Q L E L VVA T + +L + +
Sbjct: 517 GHEDIVRVGTETGVRADMQDLRLD--RSGDPGERAAALRSAPVVAATTATCGSRILRELE 574
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T P +L + ++FVLVGDH QLPP+V+S + SLF RL E
Sbjct: 575 FDVVLVDEASQLTEPDTLAAINRGARFVLVGDHEQLPPVVRSG----GRLSKSLFERLHE 630
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
+P+A L QYRM Q I S+ Y +L S E+A ++ +D+ +
Sbjct: 631 TYPEASVMLDQQYRMSQRIQAFSSREFYDGQLRPASSEVAGQRL--TDV---------GV 679
Query: 1191 NPCRP----VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+P V F + +P + +P EA +A + V ++ +IG+I P
Sbjct: 680 DPGGAVHGGVTFYD---VPGTD----DAHVDPAEADRVADVVTAYVDAGLDPGEIGVIAP 732
Query: 1247 YNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRI 1304
+ +Q I + + V + T+D++QG K+ I+VSFV E P + D R+
Sbjct: 733 FRAQVAEIGRR-TPAGVAVDTVDRFQGSSKEVIVVSFVARGTLEGP------IFEDHRRV 785
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
NVAL+RAKK L++VG R L PL +I+
Sbjct: 786 NVALSRAKKSLVLVGDERALRSEPLYDRMID 816
>gi|448490622|ref|ZP_21608080.1| DNA replication factor Dna2 [Halorubrum californiensis DSM 19288]
gi|445693740|gb|ELZ45882.1| DNA replication factor Dna2 [Halorubrum californiensis DSM 19288]
Length = 905
Score = 213 bits (541), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 254/980 (25%), Positives = 411/980 (41%), Gaps = 159/980 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ + +E+ V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGVPLNYPVVKGTIVHEVF-GDLLRGMELEASVEDR---VA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G ++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETAEVEDEVRRNAAAVEGWLAQ--------------GTLSDEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
+ I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FSLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A + + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRGLNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R ++F ++ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAER----DYFDRFYVAL----EEERRETHAEYRKLWE------QTPEE 389
Query: 803 NASDGDSLIG----------------AAIPTKDMDCTLRSGDYVILSTESDRLAVAS--G 844
A+D +LIG A D LR GD V L+++ D ++ + G
Sbjct: 390 RAADDRALIGLEPVAQTEIDDARWELRARKPDDAVSKLREGD-VALASDDDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
IT++ V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITQLGSDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHG 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDS------GSVFSQDPAL-SYIWSEKSLNDDQRRAIIKV 956
+ R+ +I P F GS + DP +YI ND Q A+
Sbjct: 490 AVLKGDPDRKGVIFGRREPEFRDPTERPPGSPGTDDPDTDAYI----DNNDAQNEAVELA 545
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
+ A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V
Sbjct: 546 VDAEDCALIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDEV 605
Query: 1017 -RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
R+G V +++ L + + + R V G + ++ + +FDV +
Sbjct: 606 LRVGTETGVREDMLDVRLVQRGEPNAKAAELREAPVVAATTAACG--SRVMRECEFDVAL 663
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL EE+P A
Sbjct: 664 VDEASQLTEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIEEYPDA 719
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
L QYRM Q I ++ Y L + E+A + +DL L L C
Sbjct: 720 SVMLDRQYRMSQRIQAFASTEFYDGALRPATPEVAGQTL--ADLGVDPDALAPDLTGC-- 775
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
V FV+ D + N EA +A I V +E DIG+I P+ +Q I
Sbjct: 776 VGFVDPD-------GERDGNRNVREAERVAAIVDAYVAAGVEPDDIGVIAPFRAQVAEIG 828
Query: 1256 HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
V+ + T+D++QG K+ I+VS V + + + D R+NVALTRAKK+L
Sbjct: 829 RRTDVT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFEDHRRMNVALTRAKKQL 881
Query: 1316 IMVGSCRTLSKVPLLKLLIN 1335
+VG L P +++
Sbjct: 882 TLVGDADALGTDPFYARMLD 901
>gi|448592491|ref|ZP_21651598.1| DNA helicase [Haloferax elongans ATCC BAA-1513]
gi|445731496|gb|ELZ83080.1| DNA helicase [Haloferax elongans ATCC BAA-1513]
Length = 884
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 138/391 (35%), Positives = 201/391 (51%), Gaps = 25/391 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NEKQDEAVSLAVDADDVALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTETGVREDMQDVRLSRSGDPNT--LAGALHDAPVVAATTATCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FDV ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDVALVDEASQLTEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++A Y L + E+A + D+ +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATGEVAAQHLHDLDVDATD- 746
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L E + PV FV+ D NP EA +A+I + +DIG+I
Sbjct: 747 -LPEVI--ADPVSFVDPDGRRVGN-------TNPTEADRVAEIVAAYESAGVAPEDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I V+ + T+D++QG K+ I+VSFV + + L D RI
Sbjct: 797 APFRAQVAEISRRTDVT---VDTVDRFQGSSKEVIIVSFVATG----DLDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYGRMLQ 880
>gi|448578437|ref|ZP_21643872.1| DNA helicase [Haloferax larsenii JCM 13917]
gi|445726978|gb|ELZ78594.1| DNA helicase [Haloferax larsenii JCM 13917]
Length = 884
Score = 211 bits (537), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 139/392 (35%), Positives = 208/392 (53%), Gaps = 27/392 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NEKQDEAVSLAVDAEDVALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLS-AMNINSVEEIKKRLDQVKVVAVTCLGITN 1063
L+ Q D VR+G V +++Q LS + + N+ + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTETGVREDMQDVRLSRSGDPNT---LAGALHDAPVVAATTATCGS 630
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
++ ++ FDV ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ S
Sbjct: 631 RVMREQSFDVALVDEASQLTEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTS 686
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
LF+RL E +P+A L QYRM Q I ++A Y L + +A ++ D+ +
Sbjct: 687 LFQRLIETYPEASVMLDRQYRMSQRIQAFASAEFYDGALRPATGPVAAQHLRDLDVDAAD 746
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L +AL PV FV+ P + NP EA +A+I + +DIG+
Sbjct: 747 --LPDAL--ADPVSFVD----PGGRRVGN---TNPTEADRVAEIVAAYEAAGVAPEDIGV 795
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
I P+ +Q I V+ + T+D++QG K+ I+VSFV + + L D R
Sbjct: 796 IAPFRAQVAEISRRTDVT---VDTVDRFQGSSKEVIIVSFVATG----DLDGPLFEDHRR 848
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
INVALTRAKK L +VG L P ++
Sbjct: 849 INVALTRAKKALCLVGDADALESDPFYDRMLQ 880
>gi|348565147|ref|XP_003468365.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cavia porcellus]
Length = 988
Score = 211 bits (536), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 172/581 (29%), Positives = 284/581 (48%), Gaps = 86/581 (14%)
Query: 823 TLRSGDYVIL-STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HE 879
+ SGD V L T ++ +A+G++T I++ VSV+F + S D L
Sbjct: 82 SFTSGDIVGLYDTANEGRQLATGILTRITQKSVSVAF---------DESHDFQLTLDREN 132
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+R+ K ++ ++ LV L S +S L ++ P S + P L +
Sbjct: 133 FYRLLKLANDVTYKRLKKALVTLKKYHSGPASSLIEVLFGGSDP-----SPAQEIPPLKF 187
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ +L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 188 YNT--ALDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQAVKQGLKVLCCAPSN 245
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVKV 1053
AVDNL+ +L + + +R+G + + IQ+H L A+ S V +I+K +DQ+ V
Sbjct: 246 VAVDNLVERLALRKLRILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADIRKDIDQIFV 305
Query: 1054 -------------------------------------VAVTCLGITN---------PLLT 1067
A + + TN LL
Sbjct: 306 KNKKTQEKKDKSNFRSEIKQLRKELKEREEAAMVESLTAASVVLATNTGASPDGPLKLLP 365
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE GQ PL+ A K +L GDH QLPP S +A + G+ +SL R
Sbjct: 366 ESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHQAAQEGLSLSLMER 425
Query: 1128 LSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+EEH + + L QYRM Q IM ++ +YG +L+ S +A ++ DL +
Sbjct: 426 LAEEHGDKVVRTLTVQYRMHQAIMHWASEAMYGGQLTAHSS-VAGQLLR--DLPGVTATE 482
Query: 1187 KEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ + P++ V+T + E +D Q+ NP E L++ Q LV ++ DI +I
Sbjct: 483 ETGI----PLLLVDTASCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVI 538
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
TPYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+ R L +
Sbjct: 539 TPYNLQVDLLRQSLEHKHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDR 595
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + +V RT++ P LK L++ V + +
Sbjct: 596 RINVAVTRARRHVALVCDSRTVNNHPFLKTLVDYVTQHGEV 636
>gi|448618409|ref|ZP_21666646.1| DNA helicase [Haloferax mediterranei ATCC 33500]
gi|445746780|gb|ELZ98238.1| DNA helicase [Haloferax mediterranei ATCC 33500]
Length = 884
Score = 210 bits (535), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 200/396 (50%), Gaps = 35/396 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NEAQDEAVSLAIDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q + VR+G V +++ LS + + L VVA T +
Sbjct: 574 EALRDQGFESIVRVGTESGVREDMLDVRLSRSGDPNT--LASALHDAPVVAATTATCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FDV ++DEA Q T P +L A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDVALVDEASQLTEPGTLAAANLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA-----NAKIKVSDL 1179
F+RL E HP A L QYRM Q I ++A Y L + E+A + I V+DL
Sbjct: 688 FQRLIESHPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATGEVAAQHLRDLGIGVADL 747
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
+ PV FV+ D NPVEA +A+I ++
Sbjct: 748 PDET---------ADPVSFVDPDGRRVGN-------TNPVEADRVAEIVAAYEAAGVDAD 791
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
DIG+I P+ +Q I V+ + T+D++QG K+ I+VSFV + + L
Sbjct: 792 DIGVIAPFRAQVAEISRRTDVT---VDTVDRFQGSSKEVIIVSFVATG----DLDGPLFE 844
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D RINVALTRAKK L +VG L P ++
Sbjct: 845 DHRRINVALTRAKKALCLVGDADALESDPFYDRMLQ 880
>gi|389848202|ref|YP_006350441.1| DNA helicase [Haloferax mediterranei ATCC 33500]
gi|388245508|gb|AFK20454.1| DNA helicase [Haloferax mediterranei ATCC 33500]
Length = 908
Score = 210 bits (534), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 200/396 (50%), Gaps = 35/396 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 538 NEAQDEAVSLAIDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 597
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q + VR+G V +++ LS + + L VVA T +
Sbjct: 598 EALRDQGFESIVRVGTESGVREDMLDVRLSRSGDPNT--LASALHDAPVVAATTATCGSR 655
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FDV ++DEA Q T P +L A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 656 VMREQSFDVALVDEASQLTEPGTLAAANLADRFVLVGDHKQLPPVVRA----ENDLQTSL 711
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA-----NAKIKVSDL 1179
F+RL E HP A L QYRM Q I ++A Y L + E+A + I V+DL
Sbjct: 712 FQRLIESHPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATGEVAAQHLRDLGIGVADL 771
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
+ PV FV+ D NPVEA +A+I ++
Sbjct: 772 PDET---------ADPVSFVDPDGRRVGN-------TNPVEADRVAEIVAAYEAAGVDAD 815
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
DIG+I P+ +Q I V+ + T+D++QG K+ I+VSFV + + L
Sbjct: 816 DIGVIAPFRAQVAEISRRTDVT---VDTVDRFQGSSKEVIIVSFVATG----DLDGPLFE 868
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D RINVALTRAKK L +VG L P ++
Sbjct: 869 DHRRINVALTRAKKALCLVGDADALESDPFYDRMLQ 904
>gi|168705200|ref|ZP_02737477.1| DNA-binding protein SMUBP-2 [Gemmata obscuriglobus UQM 2246]
Length = 766
Score = 209 bits (533), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 151/460 (32%), Positives = 224/460 (48%), Gaps = 66/460 (14%)
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
S +LN+ QR A+ L A D+A+I G PGTGKT+T+V ++ L+ RG +L + +N A
Sbjct: 311 SPSTLNEPQRDAVAFALAAPDFAIIHGPPGTGKTTTVVEFIRKLVARGDKVLACAPSNHA 370
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL--------------------------- 1033
VDNLL KL VR+G V E++ +
Sbjct: 371 VDNLLEKLLGVGELPVRLGHPARVMPELRARAIDILAEKHPDARQARKVAREAFALFRQA 430
Query: 1034 -------------SAMNINSVEEI-----------KKRLDQVKVVAVTCLGITNPLLTDK 1069
+A+ + E + ++ LD+ +VV T G+ + LL +
Sbjct: 431 DKWTREKPQPGEKAALRKEAREMLTEVRRLEASATERVLDEARVVCATLTGLDSQLLGQR 490
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
+FDV ++DEA Q+T P + PL+ A+K VL GDH QLPP V S EA E G+ +SL RL
Sbjct: 491 RFDVVVIDEACQSTEPAAWVPLLRANKVVLAGDHCQLPPTVLSPEAAERGLSVSLMERLV 550
Query: 1130 EEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ P A L Q+RM +M SN Y +L +A+ + L ++
Sbjct: 551 RQFGPGASRLLTVQHRMHAAVMGFSNGEFYDSQL------VAHESVAAHLLCHLPGVARD 604
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGKDIGIITP 1246
L PV F++T E + T + N EA L K + L+ I IG+ITP
Sbjct: 605 PLTET-PVQFIDTAGASYDEELEEDTGSRFNAQEATLAVKKVRALLALGIAPSQIGLITP 663
Query: 1247 YNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
Y +Q L+R L+ V +EI ++D +QGR+K+ I+VS VRS+ L D R N
Sbjct: 664 YRAQVRLLREKLADVPGLEIDSVDGFQGREKEAIVVSLVRSNN---EGEIGFLSDTRRTN 720
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
VA TRA++KL+++G TL+ P + ++ EQ G LN
Sbjct: 721 VAFTRARRKLLVIGDSATLASDPFYQRMLTYF-EQIGALN 759
>gi|448377755|ref|ZP_21560451.1| DNA replication factor Dna2 [Halovivax asiaticus JCM 14624]
gi|445655699|gb|ELZ08544.1| DNA replication factor Dna2 [Halovivax asiaticus JCM 14624]
Length = 920
Score = 209 bits (533), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 208/395 (52%), Gaps = 28/395 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + A+D ALI G PGTGKT T+ +V A++ RG ILL+++TN AVDN L
Sbjct: 545 NAAQDEAVRKAVGARDCALIHGPPGTGKTYTIARSVDAMVERGERILLSAFTNRAVDNAL 604
Query: 1006 IKLKSQSID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
L ID R+G V ++Q L +E + L+ ++VA T
Sbjct: 605 EALLDAGIDPDRIARVGTESGVRSDLQH--LRLEREGDPDERVRALEDAQIVAATTATCG 662
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH+QLPP+VQ+ EN +
Sbjct: 663 SRIMKEQSFDVALVDEAAQLTEPGTYAAINLAERFVLVGDHHQLPPVVQA----ENELVE 718
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
SLF RL E +P A L QYRM Q I + Y RL + +A+ + DL
Sbjct: 719 SLFERLVETYPDAGVMLDRQYRMNQRIQAFPSREFYDGRLRPATPAVASRTL--DDLDGV 776
Query: 1183 SPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
S + AL R PV FV+ +P D + + EA IA + + ++ +D
Sbjct: 777 S---RSALPADRRDPVTFVD---VPG----DGERHTDAEEAARIADLIETYEAAGLDRED 826
Query: 1241 IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
IG+I P+ +Q + I + + V + T+D++QG ++ I+VSFV S + + D
Sbjct: 827 IGVIAPFRAQVSEIERRVP-ADVTVDTVDRFQGSSQEVIVVSFVASG----DLDGPIFED 881
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ RINV LTR K+ L++VG L P+ + +++
Sbjct: 882 YRRINVGLTRPKRALVLVGDAEALESDPVYRRMLD 916
>gi|399576817|ref|ZP_10770572.1| DNA/RNA helicase, superfamily i [Halogranum salarium B-1]
gi|399238261|gb|EJN59190.1| DNA/RNA helicase, superfamily i [Halogranum salarium B-1]
Length = 886
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/418 (33%), Positives = 218/418 (52%), Gaps = 43/418 (10%)
Query: 922 PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV 981
P+F++G +YI + ND Q A+ + A+D ALI G PGTGKT T+ +
Sbjct: 502 PKFETGE-------QTYIDN----NDSQNAAVNLAVNAEDCALIHGPPGTGKTYTIARTI 550
Query: 982 KALLMRGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINS 1040
+AL+ G +LL+++TN AVDN L L+ Q + VR+G V +++Q + +
Sbjct: 551 RALVDDGNRVLLSAFTNRAVDNALEALRDQGYERIVRVGTKTGVREDMQD-----LRLEQ 605
Query: 1041 VEEIKKR---LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKF 1097
E R L +VVA T + ++ +++FDV ++DEA Q T P +L A++F
Sbjct: 606 RGEPNDRVAELAHAQVVAATTSTCGSRVMREQEFDVALVDEASQLTEPGTLAATNLANRF 665
Query: 1098 VLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALI 1157
VLVGDH QLPP+V++ EN + SLF+RL E +P A L QYRM Q I S+
Sbjct: 666 VLVGDHQQLPPVVRA----ENDLTTSLFQRLIERYPDASVMLDRQYRMAQRIQAFSSTEF 721
Query: 1158 YGDRLSCGSDEIANAKIKVSDLSSCSP-WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN 1216
Y +L + E+A ++ ++LS P L AL V FV+ +
Sbjct: 722 YDGQLRPATGEVAAQRL--ANLSGVDPSALPAALQDV--VSFVDPEGTRVGN-------T 770
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDK 1276
NP EA +A + Q + DIG+I P+ +Q I + V+ + T+D++QG K
Sbjct: 771 NPTEADRVADVVQSFRDAGVPADDIGVIAPFRAQVAEIGRRVDVT---VDTVDRFQGSAK 827
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+ I+VSFV + + + D+ R+NVALTRAKK L++VG L+ P ++
Sbjct: 828 EVIVVSFVATG----SLDEPIFEDYRRLNVALTRAKKALVLVGDPTALASDPFYARML 881
>gi|448425801|ref|ZP_21582973.1| DNA replication factor Dna2 [Halorubrum terrestre JCM 10247]
gi|445680216|gb|ELZ32666.1| DNA replication factor Dna2 [Halorubrum terrestre JCM 10247]
Length = 898
Score = 209 bits (531), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 256/975 (26%), Positives = 414/975 (42%), Gaps = 156/975 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ M+ A V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLR---GMELEASVADRVA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G +++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETDEVEDEVRRNAAAVEGWLAQ--------------GTLADEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
T I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FTLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R ++F +++ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAER----DYFDRFYTAL----EEERRETHAEYRKLWE------QTPAE 389
Query: 803 NASDGDSLIG----AAIPTKDMDCTLRS---GDYVILSTESDRLAVAS-----------G 844
A+D +LI A D LR+ GD V E D +A+AS G
Sbjct: 390 RAADDRALIDLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
ITE+ + V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITELGKDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHD 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ R+ ++ P F + D +YI + S N+ A+ + A+D A
Sbjct: 490 AVLKGEPDRKDVLFGRREPEFRDAADRPADAPGAYIDNNASQNE----AVELAVDAEDLA 545
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHE 1022
LI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G
Sbjct: 546 LIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDVLRVGTET 605
Query: 1023 VVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
V ++Q L + + + R V G + ++ + +FDV ++DEA Q
Sbjct: 606 GVRGDMQDVRLVQRGEPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVALVDEASQL 663
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L Q
Sbjct: 664 TEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIERYPDASVMLDRQ 719
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--CRPVIFVN 1200
YRM Q I ++A Y L + E+A + +DL P +AL P V FV+
Sbjct: 720 YRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPELTGGVGFVD 773
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV 1260
D + N EA +A + V ++ D+G+I P+ +Q I V
Sbjct: 774 PD-------GERDGNRNVREAERVAAVVDAYVAAGVDPDDVGVIAPFRAQVAEIGRRTDV 826
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+ + T+D++QG K+ ILVSFV + + + D R+NVALTRAKK+L +VG
Sbjct: 827 T---VDTVDRFQGSSKEVILVSFVATG----DLDGPIFEDHRRVNVALTRAKKQLTIVGD 879
Query: 1321 CRTLSKVPLLKLLIN 1335
L P +++
Sbjct: 880 AAALGSDPFYARMLD 894
>gi|448485068|ref|ZP_21606434.1| DNA replication factor Dna2 [Halorubrum arcis JCM 13916]
gi|445818761|gb|EMA68611.1| DNA replication factor Dna2 [Halorubrum arcis JCM 13916]
Length = 898
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 258/975 (26%), Positives = 413/975 (42%), Gaps = 156/975 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ M+ A V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLR---GMELEASVADRVA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G +++ + + W+ G+ + SE
Sbjct: 151 EAGLE-LGLLGYETDEVEDEVRRNAAAVEGWLAQ--------------GTLADEDTWRSE 195
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
T I +P +GLKG DA R P+E KTGK + + Q
Sbjct: 196 FTLI-----SPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDTCMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K QV R +T VL+ E ++++ + R ++ +P
Sbjct: 344 SKAGQVGTPVPDAERDYFDRFYT------VLE--EERRETHAEYRKLWE------QTPAE 389
Query: 803 NASDGDSLIG----AAIPTKDMDCTLRS---GDYVILSTESDRLAVAS-----------G 844
A+D +LI A D LR+ GD V E D +A+AS G
Sbjct: 390 RAADDRALIDLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHAELG 448
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
ITE+ + V V +P+ E+ R+D + SV R +L L
Sbjct: 449 RITELGKDEVVVETDEPV----------------ELRRLDV--YPSEISVDR-SLTALHD 489
Query: 905 QSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ R+ ++ P F + D +YI + S N+ A+ + A+D A
Sbjct: 490 AVLKGEPDRKDVLFGRREPEFRDAADRPADAPGAYIDNNASQNE----AVELAVDAEDLA 545
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHE 1022
LI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G
Sbjct: 546 LIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDVLRVGTET 605
Query: 1023 VVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
V ++Q L + + + R V G + ++ + +FDV ++DEA Q
Sbjct: 606 GVRGDMQDVRLVQRGEPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVALVDEASQL 663
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
T P + + A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L Q
Sbjct: 664 TEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIERYPDASVMLDRQ 719
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--CRPVIFVN 1200
YRM Q I ++A Y L + E+A + +DL P +AL P V FV+
Sbjct: 720 YRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPELTGGVGFVD 773
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV 1260
D + N EA +A + V ++ D+G+I P+ +Q I V
Sbjct: 774 PD-------GERDGNRNVREAERVAAVVDAYVAAGVDPDDVGVIAPFRAQVAEIGRRTDV 826
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+ + T+D++QG K+ ILVSFV + + + D R+NVALTRAKK+L +VG
Sbjct: 827 T---VDTVDRFQGSSKEVILVSFVATG----DLDGPIFEDHRRVNVALTRAKKQLTIVGD 879
Query: 1321 CRTLSKVPLLKLLIN 1335
L P +++
Sbjct: 880 ADALGSDPFYARMLD 894
>gi|451848025|gb|EMD61331.1| hypothetical protein COCSADRAFT_122838, partial [Cochliobolus
sativus ND90Pr]
Length = 971
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 212/411 (51%), Gaps = 37/411 (9%)
Query: 370 FLVLEVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGE 429
+LV V E + D + P KVL + E++ +A+ L + WF T G V+VIGE
Sbjct: 561 YLVKRVDESSYTTD-RGYQMPEKVLMVEEEKTKLFKAIILRQAWFDTPCTAGSFVHVIGE 619
Query: 430 FDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALL-GTL 488
F G+C V NN LI+HPD L+S T VA SF C RR+VL +R+K + R+ + +L GTL
Sbjct: 620 FTSGGQCVVDDHNNMLILHPDHLISSTVVADSFGCLRRAVLQDRVKATSRANAPMLYGTL 679
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH++FQ + FL + +L ++E++ D+ + + +P++ W
Sbjct: 680 LHELFQEAMKANKWDTTFLLQTIEKLLPSHLEAILEINSTCEDVKEHMSSKLPELQAWAK 739
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+F ++ V + + I+++ D+EE W+P YGLKG IDA+++V + + E
Sbjct: 740 IFVCAEPQADAVVRERNGRQCTMSINKLLDVEEHVWSPMYGLKGNIDATVQVTMRDDQGE 799
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ +P E KTGK S+ H AQ LY LL+S RY +I G+LYYL++ +
Sbjct: 800 -RTLTVPFEVKTGK---NSSNAAHVAQTALYNLLLSNRYDVNIAYGILYYLETSDISRIP 855
Query: 669 VQRSDLVGLIMRRNEFA---NDIIKASTTQQLPPMLRAYGGNKEC--------------S 711
R+D++ +I++RNE A D I +LPP+L+ ++C
Sbjct: 856 AIRNDIIHMIIKRNELACYVRDRI------ELPPVLKEDFKCQKCYAQEACFLYHDLVEE 909
Query: 712 GLGNM--------FDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW 754
G G+M +D + L ++H F++ WD L+ E +M + E+W
Sbjct: 910 GKGDMLNKKAKERYDELVAPLQSSHREFMKKWDTLLTKEETDMMKFRRELW 960
>gi|448345669|ref|ZP_21534558.1| DNA replication factor Dna2 [Natrinema altunense JCM 12890]
gi|445633602|gb|ELY86789.1| DNA replication factor Dna2 [Natrinema altunense JCM 12890]
Length = 911
Score = 208 bits (529), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 210/401 (52%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ K + A+D+ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 533 NDAQNEAVQKAVGAEDFALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 592
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q D VR+G V E++ + L ++ L++ +VVA T
Sbjct: 593 EALLEQLEDVIDEDRVVRVGSESGVSDEMEPYRLE--RAGEPDDRVAELEEAQVVAATTS 650
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FD ++DEAGQ T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 651 TCGSRVMKEQSFDAALVDEAGQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----END 706
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL E +P A L QYRM Q I ++ Y +L + E+A + DL
Sbjct: 707 LTESLFERLVERYPDAGVMLDRQYRMNQRIQVFASTEFYDGQLRPATPEVAGRTL--DDL 764
Query: 1180 SSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S L + L+ PV FV+ + D + EA IA + + ++
Sbjct: 765 EGVSRDVLPDTLSD--PVSFVDVE-------GDRSQYTDGEEAARIADLIERYEDAGLDR 815
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+IG+I P+ +Q + I + V + T+D++QG ++ I+VSF T SL
Sbjct: 816 SEIGVIAPFRAQVSEISSRVP-DDVTVDTVDRFQGSSQEVIIVSF--------TATGSLE 866
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 867 GPIFEDYRRINVALTRPKRALVLVGDAAALASDPVYERMLE 907
Score = 43.9 bits (102), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 48/287 (16%)
Query: 403 EERAVHLWEDWFHT--VIAPGDTVNVIGEFDD--QGKCDVGRE-NNFLIVHPDVLVSGTR 457
E V LW W + ++ PG + V + QG+ +++++V P LVS T
Sbjct: 58 ETTTVTLWNKWTESADLLEPGMELLVTNAKAEEYQGETQYATTGDSYVVVEPSFLVSVTS 117
Query: 458 VAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
+ CPR L+ +L + + GTL+H++F ++ + LE+ +++
Sbjct: 118 IRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-----GDLLRGRDLEDSIAARVEE 171
Query: 518 NIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVT 577
L G + + + + E + W L +D DG +
Sbjct: 172 RGLQLGLLGETADAVAEDVRENATAIEGW---------LQQGRLDEAEDGWRS------- 215
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
E++ + +G++G DA R P+E KTGK + + + Q
Sbjct: 216 --EQLLISETFGIRGRADAVRRGA-------------PVELKTGKNLKKEPRFKDKVQAA 260
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
Y LL+ E + +D G L Y T+ ++ R++ G + EF
Sbjct: 261 CYALLLEE-HGGDVDIGTLLY-----TKNSVLDRNEETGDLNPAKEF 301
>gi|435848041|ref|YP_007310291.1| DNA/RNA helicase, superfamily I [Natronococcus occultus SP4]
gi|433674309|gb|AGB38501.1| DNA/RNA helicase, superfamily I [Natronococcus occultus SP4]
Length = 932
Score = 207 bits (527), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 209/408 (51%), Gaps = 41/408 (10%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN-- 1003
ND Q A+ + A+D ALI G PGTGKT T+ AV+A++ RG +LL+++TN AVDN
Sbjct: 544 NDAQNDAVEMAVGARDCALIHGPPGTGKTYTIARAVRAMVDRGERVLLSAFTNRAVDNVL 603
Query: 1004 --LLIKLKSQSID--FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
+L +L S D VR+G V +++Q + L E L+ +VVA T
Sbjct: 604 EAVLEQLDSAGADDRIVRVGSESGVREDMQPYRLE--RAGDPETRLAELEDAQVVAATTA 661
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ------ST 1113
+ ++ ++ FD ++DEA Q T P + A +FVLVGDH QLPP+VQ S
Sbjct: 662 TCGSRIMKEQSFDAALVDEAAQLTEPGTFAATNLADRFVLVGDHEQLPPVVQAEGGTGSD 721
Query: 1114 EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
E R + SLF RL + HP A L QYRM Q I ++ Y +L E+A
Sbjct: 722 EPRAADLTESLFERLVDCHPDAGVMLDRQYRMNQRIQAFASREFYDGQLRPAEPEVAGR- 780
Query: 1174 IKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
V DL S ++AL PV FV+ E + Q + EA +A++ +
Sbjct: 781 -TVDDLEGVS---RDALPATLRDPVAFVDV------EGESSQ-YTDEAEAARVAELIEAY 829
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
++ DIG+I P+ +Q + I + + V + T+D++QG K+ I+VSF
Sbjct: 830 EDAGLDRADIGVIAPFRAQVSTISSHVP-ADVAVDTVDRFQGSSKELIIVSF-------- 880
Query: 1292 NCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
T SL G D+ RINVALTR K+ L++VG R LS P+ ++
Sbjct: 881 TATGSLEGPIFEDYRRINVALTRPKRALVLVGDSRALSSDPVYGRMLE 928
>gi|433638976|ref|YP_007284736.1| DNA/RNA helicase, superfamily I [Halovivax ruber XH-70]
gi|433290780|gb|AGB16603.1| DNA/RNA helicase, superfamily I [Halovivax ruber XH-70]
Length = 920
Score = 207 bits (527), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 207/395 (52%), Gaps = 28/395 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + A+D ALI G PGTGKT T+ +V A++ RG ILL+++TN AVDN L
Sbjct: 545 NAAQDEAVRKAVGARDCALIHGPPGTGKTYTIARSVDAMVERGERILLSAFTNRAVDNAL 604
Query: 1006 IKLKSQSID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGIT 1062
L ID R+G V ++Q L ++ + L+ ++VA T
Sbjct: 605 EALLDAGIDPDRIARVGTESGVRPDLQH--LRLEREGDPDDRVRALEDAQIVAATTATCG 662
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH+QLPP+VQ+ EN +
Sbjct: 663 SRIMKEQSFDVALVDEAAQLTEPGTYAAINLAERFVLVGDHHQLPPVVQA----ENELVE 718
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
SLF RL E +P A L QYRM Q I + Y RL + +A+ + DL
Sbjct: 719 SLFERLVETYPDAGVMLDRQYRMNQRIQAFPSREFYDGRLRPATPAVASRTL--DDLDGV 776
Query: 1183 SPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
S + AL R PV F++ +P D + + EA IA + + ++ D
Sbjct: 777 S---RSALPADRRDPVTFID---VPG----DEERHTDAEEAARIADLIETYEAAGLDRDD 826
Query: 1241 IGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
IG+I P+ +Q + I + + V + T+D++QG ++ I+VSFV S + + D
Sbjct: 827 IGVIAPFRAQVSEIERRVP-ADVTVDTVDRFQGSSQEVIVVSFVASG----DLDGPIFED 881
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ RINV LTR K+ L++VG L P+ + +++
Sbjct: 882 YRRINVGLTRPKRALVLVGDAEALESDPVYRRMLD 916
>gi|448321866|ref|ZP_21511341.1| DNA replication factor Dna2 [Natronococcus amylolyticus DSM 10524]
gi|445602918|gb|ELY56889.1| DNA replication factor Dna2 [Natronococcus amylolyticus DSM 10524]
Length = 919
Score = 207 bits (526), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 152/486 (31%), Positives = 239/486 (49%), Gaps = 60/486 (12%)
Query: 875 SLLHEVWRIDKDEIMTS----FSVMRYN-----------LVQLFLQSAQSSQLRRMIVDL 919
S L + R+D+DE++ + V R + LV L + S+ R+ ++
Sbjct: 465 SELARIERLDEDEVVLTADEPVEVTRLDVYPSELTTDRLLVALHDTLLKGSERRKDVLFG 524
Query: 920 EA-PRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
A P FD +P ++I + N Q A+ K + A+D ALI G PGTGKT T+
Sbjct: 525 RAEPEFD-------EPEETFIGN----NAAQDEAVRKAVGARDCALIHGPPGTGKTYTIA 573
Query: 979 HAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ------SIDFVRIGRHEVVHKEIQKHC 1032
A++A++ RG +LL+++TN AVDN L L Q VR+G V +++ +
Sbjct: 574 RAIRAMVERGERVLLSAFTNRAVDNALEALLEQLEGVIEEDRIVRVGSESGVREDMAPYR 633
Query: 1033 LSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM 1092
L EE L+ +VVA T + ++ ++ FD ++DEA Q T P + +
Sbjct: 634 LE--RAGDPEERLAELENAQVVAATTATCGSRIMKEQSFDAALVDEAAQLTEPGTFAAIN 691
Query: 1093 FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
A +FVLVGDH QLPP+V++ EN + SLF RL E HP+A L QYRM Q I
Sbjct: 692 LAERFVLVGDHEQLPPVVRA----ENELTESLFERLVELHPEAGVMLDRQYRMNQRIQAF 747
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR---PVIFVNTDMLPAYEA 1209
++ Y +L E+A + DL S ++ L P PV FV+ +
Sbjct: 748 ASREFYDGKLRPAEPEVAARTL--DDLEGVS---RDDL-PAEFRDPVAFVDVE------- 794
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTID 1269
D + + +EA IA++ ++ D+G+I P+ +Q + I + V + T+D
Sbjct: 795 GDDERYTDSLEAARIAELIAAYEAAGVDPADVGVIAPFRAQVSEISRHVP-EGVAVDTVD 853
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
++QG K+ I+VSF + + D+ RINVALTR K+ L++VG LS P+
Sbjct: 854 RFQGSSKEVIIVSFTATG----TLEGPIFEDYRRINVALTRPKRALVLVGDSGALSSDPV 909
Query: 1330 LKLLIN 1335
++
Sbjct: 910 YGRMLE 915
Score = 47.4 bits (111), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 130/323 (40%), Gaps = 49/323 (15%)
Query: 407 VHLWEDWFHT--VIAPGDTVNVI-GEFDD-QGKCDVGRE-NNFLIVHPDVLVSGTRVAAS 461
V LW W + ++ PG + V E D+ QG+ +++++V P LV+ T +
Sbjct: 52 VTLWNKWTESAELLEPGMELLVTDAEIDEYQGETRYKTTGDSYVVVEPSFLVNVTAIRNW 111
Query: 462 FSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKNIES 521
CPR L+ +L + + GTL+H++F L++ + LEE +++
Sbjct: 112 TECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-GDLLR----GRELEESIDARVEERGLQ 165
Query: 522 LYACGVNENDIHKTLVEAIPKMLNWIILFK-DSQDLNTPTVDFGSDGLKKLKISEVTDIE 580
L G + + + + + + W+ + +D D K S + E
Sbjct: 166 LGLLGEDPESVAEDVRQNASAIEGWLEQGRLTEEDRAATAADNSERAFSPAKSSWRS--E 223
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYT 640
++ + +G++G DA R P+E KTGK + + + Q Y
Sbjct: 224 QLLISETFGIRGRADAIRRGA-------------PVELKTGKNLKKEPRFKDKVQAACYA 270
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA-------------ND 687
LL+ E + +D+G L Y T+ + R++ G + EF+ N+
Sbjct: 271 LLLEE-HGGDVDTGTLLY-----TKNSALDRNEETGDLTPAKEFSMGAGLLKYVVRLRNE 324
Query: 688 IIKASTTQQLPPMLRAYGGNKEC 710
I A +P Y GN +C
Sbjct: 325 IAAAEVAGDVPT---GYEGNAKC 344
>gi|395851782|ref|XP_003798431.1| PREDICTED: DNA-binding protein SMUBP-2 [Otolemur garnettii]
Length = 991
Score = 206 bits (525), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 272/541 (50%), Gaps = 60/541 (11%)
Query: 823 TLRSGDYVIL-STESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLL 877
+ SGD V L T S+ +A+G++T I++ +V+F + L L NS
Sbjct: 114 SFTSGDIVGLYDTASEGSQLATGILTRITQKSATVAFDESQDFQLSLDRENS-------- 165
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+R+ K ++ ++ L+ L S +S L ++ AP S S+ +
Sbjct: 166 ---YRLLKLANDVTYKRLKKALIALKKYHSGPASLLIEVLFSASAP-----SPASEIGLV 217
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L +
Sbjct: 218 TFCNA--SLDSSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAP 275
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV 1051
+N AVDNL+ +L +R+G + + IQ++ L A+ S V EI+K +DQV
Sbjct: 276 SNIAVDNLVERLAQCKQRILRLGHPSRILEPIQQYSLDAVLARSDGAQIVAEIRKDIDQV 335
Query: 1052 KVVAVTCLGITNP------------LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
V C+ +T P LL + FDV ++DE Q PL+ A K +L
Sbjct: 336 FV----CVLVTGPLACGASSDGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCIL 391
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIY 1158
GDH QLPP + S +A G+ SL RL+EEH A+ L QYRM Q IM ++ +Y
Sbjct: 392 AGDHQQLPPTIISHKAALAGLSRSLMERLAEEHGASAVRTLTVQYRMHQAIMRWASEAMY 451
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLN 1216
+L+ +A ++ DL P + P++ V+T + E +D Q+
Sbjct: 452 HGQLT-AHPSVAGHLLR--DL----PGVAATEETSIPLLLVDTAGCGLFELEEEDDQSRG 504
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGR 1274
NP E L+ Q LV ++ DI +ITPYN Q +L+R SL +EI ++D +QGR
Sbjct: 505 NPGEVRLVTLHVQALVDAGVQASDIAVITPYNLQVDLLRQSLVRRHPQLEIKSVDGFQGR 564
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+K+ +++SFVRS+ R L + RINVA+TRA++ + ++ T+S LK L+
Sbjct: 565 EKEAVILSFVRSN---RKGEVGFLAEDRRINVAVTRARRHVAVICDSHTISNHTFLKTLV 621
Query: 1335 N 1335
Sbjct: 622 E 622
>gi|448410070|ref|ZP_21575019.1| DNA replication factor Dna2 [Halosimplex carlsbadense 2-9-1]
gi|445672350|gb|ELZ24926.1| DNA replication factor Dna2 [Halosimplex carlsbadense 2-9-1]
Length = 914
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 205/398 (51%), Gaps = 38/398 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + +D ALI G PGTGKT T+ H V+AL+ R +LL+++TN AVDN L
Sbjct: 524 NDAQNEAVELAVGCEDCALIHGPPGTGKTYTLAHIVQALVDRDERVLLSAFTNRAVDNAL 583
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L Q DFVR+G V ++Q + L +E L +VVA T +
Sbjct: 584 EALVEQGFTDFVRVGTESGVRADMQDYRLE--RAGDPDERVAELRDAQVVAATTATCGSR 641
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE-------ARE 1117
++ ++ FD ++DEAGQ T P +L A +FVLVGDH QLPP+VQ+ E +
Sbjct: 642 IMREQDFDAAVVDEAGQLTEPGTLAATNLAERFVLVGDHQQLPPVVQADEPDTADLPTGD 701
Query: 1118 NG-------MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
+G + SLF+RL E +P+A L QYRM Q I ++ Y +L + E+A
Sbjct: 702 DGNPAPGATLSRSLFQRLIERYPEASVMLDRQYRMAQRIQAFASREFYDGQLRPATGEVA 761
Query: 1171 N---AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
+++ D+ + L++ V FV+ D + NPVEA +A+
Sbjct: 762 GQHLSQLDGVDVDALPVHLRDQ------VAFVDPDGT-------ARGNTNPVEAETVAET 808
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ + +IG+I P+ +Q I + +V + T+D++QG K+ I++SFV +
Sbjct: 809 VAAYREAGVPAGEIGVIAPFRAQVAEIGKHVP-DAVAVDTVDRFQGSSKEVIVISFVATG 867
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
+ S + D+ R+NV LTRAKK L++VG L
Sbjct: 868 ----SLDSPIFEDYRRVNVGLTRAKKALVLVGDADALG 901
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 48/289 (16%)
Query: 402 GEERAVHLWEDWFHTV--IAPGDTVNVIG--EFDDQGKCDVGRE-NNFLIVHPDVLVSGT 456
GE V LW W T + G + V E + +G+ ++ ++V PD LV T
Sbjct: 37 GEPTTVTLWNKWTETATYLEAGMELAVTDPEEREYRGEQQFSTTGDSMVVVEPDFLVDVT 96
Query: 457 RVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ 516
V + CPR L+ ++ + + GT++H++F L++ + ++E V +
Sbjct: 97 DVRSWVQCPRMYYLN-KIGGVPNAYPVVKGTIVHEVF-GDLLRGRDLDESIDER---VEE 151
Query: 517 KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEV 576
+E L G + +++ + + + + W+ Q T ++ SE+
Sbjct: 152 AGLE-LGMLGRSADEVREEVRQNASAIEGWL-----QQGTLTDQDEW---------RSEM 196
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
T + E YGLKG DA R GM P+E KTGK + + Q
Sbjct: 197 TLVSET-----YGLKGRADAVRR-----------GM--PVELKTGKNTKREPRFHDKVQA 238
Query: 637 ILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Y L++ ER + D+G L Y T+ V+R++ G + EF+
Sbjct: 239 TCYALILGERRGEPPDTGTLLY-----TKNAAVERNEESGDLSPAKEFS 282
>gi|195164399|ref|XP_002023035.1| GL16389 [Drosophila persimilis]
gi|194105097|gb|EDW27140.1| GL16389 [Drosophila persimilis]
Length = 930
Score = 206 bits (524), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 198/715 (27%), Positives = 335/715 (46%), Gaps = 104/715 (14%)
Query: 413 WFHTVIAPGDTVNVIGEFD-DQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
W + GD V+++ ++ Q + +E+ F + +PD LVSGT V S C R++VL
Sbjct: 115 WNMCDMKKGDIVSLLAKWQPSQNVYVIDKEDGFCVTNPDFLVSGTTVMGSLFCRRKTVLQ 174
Query: 472 ERLK-CSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQKN--IESLYACGVN 528
ER + + ++GTL+H++FQ + ++ T ++ +LQ +SLYA +
Sbjct: 175 ERFRGLHWNNRVMIIGTLVHELFQRVVSEQHYTRSHVKTILNYMLQSPSLAQSLYAGDLT 234
Query: 529 ENDIHKTLVEAIPKMLNWIILFKDSQDLN-TPT----VDFGSDGLKKLKISEVTDIEEMA 583
E+++ + + + ++ I+ F L TP V+F + +I + + EE
Sbjct: 235 EDEV----INDLQRFVDPIVRFAKQYVLGETPVIPSPVNF------RGRIERIENTEENL 284
Query: 584 WAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLM 643
W P+ GLKG +D S+ V + +PLE KTG+ SMEH Q+ILY ++
Sbjct: 285 WVPQLGLKGKVDVSVSVTTANDP-------IPLELKTGR---STFSMEHTGQLILYQMMH 334
Query: 644 SERYLKHIDSGLLYYLQSDQTQGVMVQ-----RSD----LVGLIMRRNEFANDII----- 689
S ++ SGLL YL+ + + V Q RSD G + + + + +
Sbjct: 335 SALGVE-TRSGLLLYLRENMMREVFRQAQRDARSDHDAQRSGKYLVKEDIEDLYLPEPIH 393
Query: 690 --KASTTQQLPPMLRAYGGNKECSGLGNMFDSH---------IYHLTTAHCSFLRHWDRL 738
A T + + +Y LG DSH + HL F HW +
Sbjct: 394 HHSACTQCEYRTLCASYAKWDNILRLG---DSHSMKILMPTLLEHLADEDQEFFHHWLGI 450
Query: 739 IDLEAKEMQVV--KNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV--YHFVR 794
+ LE K + ++ IW ++ + L S ++ D RF R
Sbjct: 451 LALEDKHSRASFKQHSIWTDDPVSRQQQGRAIAQLKLYPSQLALET--DGRFEQNLELAR 508
Query: 795 QHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHV 854
+ PS L+ S D G+YV++STES R+AVASG+I + +
Sbjct: 509 EVDPSIQLHLSGFDV-----------------GEYVVISTES-RMAVASGIIVSLECRRL 550
Query: 855 SVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY-NLVQLFLQSAQSSQLR 913
+V+ + L+ E + +DK + T FS Y NL L + ++ QLR
Sbjct: 551 TVALDRDLK----------PQYAKETFIMDKHDSQT-FSTFNYTNLGMLLAPTLRAKQLR 599
Query: 914 RMIVDLEAPR-FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTG 972
+IV L+ P FDS L + + LN Q A++ L++ + LI G+PGTG
Sbjct: 600 SIIVALDPPLPFDSLPDIILTEGLHIL---QYLNKQQNEAVMHCLSSNTHFLIKGLPGTG 656
Query: 973 KTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
KT T+V V+ L + S+L+T++T+SAVDNL+ +L + + +R+G+ ++ +++
Sbjct: 657 KTQTLVALVRMLHLLNLSVLITAHTHSAVDNLMNRLMAYGLPMLRLGQSARINDCLEE-- 714
Query: 1033 LSAMNIN----SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
+S N+ +V+ + + L+ +V VTCLG + + ++ FD CI+DEA Q T
Sbjct: 715 ISEANVTRRCRTVDSLTRVLETPAIVGVTCLGTGHAVFRNRTFDYCIVDEATQVT 769
Score = 71.2 bits (173), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH--SLSVSSVEIHTIDK 1270
Q N E ++ + +L E + +G+I PY +Q L+R S VE +T+D+
Sbjct: 767 QVTPNTCEVGVVMNLLLQLQLAEYDLSTVGVIAPYRAQVELLRRLGGRLDSRVEFNTVDQ 826
Query: 1271 YQGRDKDCILVSFVRSSENP---RNCTSS-LLGDWHRINVALTRAKKKLIMVGSCRTL 1324
YQGRDK+ I+ S ++ +P + C ++ +L D R+ VA+TRAK+KLI++G L
Sbjct: 827 YQGRDKNIIIYSCTKTGRDPTEKKRCRAAEILEDKRRLTVAITRAKQKLIILGDVTCL 884
>gi|448611940|ref|ZP_21662370.1| DNA helicase [Haloferax mucosum ATCC BAA-1512]
gi|445742701|gb|ELZ94195.1| DNA helicase [Haloferax mucosum ATCC BAA-1512]
Length = 884
Score = 206 bits (523), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/396 (34%), Positives = 200/396 (50%), Gaps = 35/396 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NEGQDEAVSLAIDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++ LS + + L VVA T +
Sbjct: 574 EALRDQGFEDVVRVGTETGVREDMLDVRLS--RSGDPDTLAGTLHDAPVVAATTATCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FDV ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDVALVDEASQLTEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA-----NAKIKVSDL 1179
F+RL E +P+A L QYRM Q I ++ Y L + +A + I V DL
Sbjct: 688 FQRLIETYPEASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHPRDLGIDVRDL 747
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
P L+ PV F++ D NP EA +A I ++
Sbjct: 748 ---PPELES------PVAFIDPDGRRVGN-------TNPTEADRVADIVAAYETAGVDAD 791
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
DIG+I P+ +Q I V+ + T+D++QG K+ I+VSFV + + L
Sbjct: 792 DIGVIAPFRAQVAEISRRTDVT---VDTVDRFQGSSKEVIVVSFVATG----DLDGPLFE 844
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D RINVALTRAKK L +VG L P L++
Sbjct: 845 DHRRINVALTRAKKALCLVGDAAALESDPFYDRLLD 880
>gi|448303283|ref|ZP_21493232.1| DNA replication factor Dna2 [Natronorubrum sulfidifaciens JCM 14089]
gi|445593068|gb|ELY47246.1| DNA replication factor Dna2 [Natronorubrum sulfidifaciens JCM 14089]
Length = 939
Score = 206 bits (523), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 211/411 (51%), Gaps = 47/411 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 551 NAAQNEAVTKAVGARDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 610
Query: 1006 IKLKSQ----------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
L Q + VR+G + ++++ + L E+ L
Sbjct: 611 EALLEQLEDGVESQTERSGDGEGVSVVRVGSESGIREDMEPYRLE--RSGDPEDRVAELQ 668
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+VVA T + ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+
Sbjct: 669 NAQVVAATTATCGSRVMKEQAFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPV 728
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V++ EN + SLF RL + HP+A L QYRM Q I ++ Y L E+
Sbjct: 729 VRA----ENDLTESLFERLIDCHPEAGVMLDRQYRMNQRIQAFASKEFYDGELRPAEPEV 784
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
A + DL+ S ++AL P R PV FV+ + D + EA IA++
Sbjct: 785 AGRTL--DDLAGVS---RDALPPERRDPVTFVDVE-------GDGGQYTDSEEAARIAEL 832
Query: 1228 TQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRS 1286
+ + +E +IG+I P+ +Q + L RH V + T+D++QG ++ I++SF +
Sbjct: 833 IETYERAGLERSEIGVIAPFRAQVSELSRH--VPDDVTVDTVDRFQGSSQEVIIISFTAT 890
Query: 1287 S--ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
E P + D+ RINVALTR K+ L++VG LS P+ ++
Sbjct: 891 GTLEGP------IFEDYRRINVALTRPKRALVLVGDPAALSSDPVYARMLE 935
Score = 42.0 bits (97), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 49/287 (17%)
Query: 403 EERAVHLWEDWFHTV--IAPGDTVNVIGEFDD--QGKCDVGRE-NNFLIVHPDVLVSGTR 457
E V LW W + + PG V V ++ QG+ +++++V P LV+ T
Sbjct: 61 ETTTVTLWNKWAESADYLEPGLEVLVTDAKEETYQGETQYATTGDSYVVVEPSFLVNVTA 120
Query: 458 VAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
+ CPR L+ +L + + GTL+H++F L+ +
Sbjct: 121 IRNWVQCPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-----------------GDLLRGR 162
Query: 518 NIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVT 577
++E V+E + L+ P+ + ++ ++ T + G +L +
Sbjct: 163 DLEESIDARVDERGLELGLLGETPEAVA-----EEVRENATAIEGWLEQG--RLTEEDSW 215
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
E++ + +G++G DA R P+E KTGK + + + Q
Sbjct: 216 RSEQLLISETFGIRGRADAIRRGS-------------PVELKTGKNLKKEPRFKDKVQAA 262
Query: 638 LYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
Y LL+ E + +D G L Y T+ + R++ G + EF
Sbjct: 263 CYALLLEE-HGGDVDHGTLLY-----TKNSALDRNEETGDLTPAKEF 303
>gi|448317312|ref|ZP_21506868.1| DNA replication factor Dna2 [Natronococcus jeotgali DSM 18795]
gi|445603832|gb|ELY57785.1| DNA replication factor Dna2 [Natronococcus jeotgali DSM 18795]
Length = 920
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 205/398 (51%), Gaps = 31/398 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ K + A+D ALI G PGTGKT T+ AV+A++ RG +LL+++TN AVDN L
Sbjct: 542 NDAQDEAVRKAVGARDCALIHGPPGTGKTHTIARAVRAMVERGERVLLSAFTNRAVDNAL 601
Query: 1006 IKLKSQ---SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
+ Q +ID VR+G V ++++ + L +E L+ +VVA T
Sbjct: 602 EAVLEQLGDAIDEHRVVRVGSESGVREDMEPYRLE--RAGDPDERLAELEDARVVAATTA 659
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FD ++DEA Q T P + A +FVLVGDH QLPP+V++ EN
Sbjct: 660 TCGSRVMKEQSFDAALVDEAAQLTEPGTFAATNLAERFVLVGDHEQLPPVVRA----ENE 715
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP A L QYRM Q I + Y L E+A + DL
Sbjct: 716 LTESLFERLVDLHPDAGVMLDRQYRMNQRIQAFPSREFYDGTLRPAEPEVAGRTL--DDL 773
Query: 1180 SSCSPWLKEAL--NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
S +EAL + PV FV+ + D + EA +A++ ++
Sbjct: 774 EGVS---REALPADLRDPVAFVDVE-------GDGSRYTDSEEAARVAELIDAYEAAGVD 823
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DIG+I P+ +Q + + S V + T+D++QG ++ I+VSF + +
Sbjct: 824 RADIGVIAPFRAQVSEL-SSRVPPEVAVDTVDRFQGSSEEVIVVSFTATG----TLEGPI 878
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D+ RINVALTR K+ L++VG R LS P+ ++
Sbjct: 879 FEDYRRINVALTRPKRALVLVGDSRALSADPVYGRMLE 916
>gi|283779091|ref|YP_003369846.1| AAA ATPase [Pirellula staleyi DSM 6068]
gi|283437544|gb|ADB15986.1| AAA ATPase [Pirellula staleyi DSM 6068]
Length = 639
Score = 205 bits (522), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 232/478 (48%), Gaps = 79/478 (16%)
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
++S + QLR ++ AP+F F D AL + Q+ + L+A+D+A
Sbjct: 158 VESGRIKQLRDSLLGETAPKFREVKNFVADAAL---------DPSQQEGVKLALSAEDFA 208
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR--- 1020
I G PGTGKT+T+V ++ L+ RGA +L T+ +N AVD+LL KL + +R+G
Sbjct: 209 CIHGPPGTGKTTTLVAVIRQLVARGAKVLATAPSNLAVDHLLEKLHLAGVRVLRLGHPAR 268
Query: 1021 ------HEVVHKEIQKHCLSAMNINSVEE------------------------------- 1043
H V+ ++++ H A+ V +
Sbjct: 269 VQESLHHLVLDEQVENHPDVAVARKLVRDALRLKDRAAKFTRAKPPPGYKQELRAEAREL 328
Query: 1044 -----------IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM 1092
++ LD VV T GI +L D++FDV ++DEA Q T P L+
Sbjct: 329 FSDARRIEAGVVRYLLDSADVVLATLTGIDATVLEDRRFDVAVIDEAAQATEPACWPALL 388
Query: 1093 FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIME 1151
A + +L GD +QLPP + S EA G+ SL RL E IS L QYRM Q IM
Sbjct: 389 RADRVILAGDPFQLPPTIISPEAARGGLARSLMERLLETSTTTISHRLAVQYRMHQSIMA 448
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK- 1210
S+A Y L+ + + A +SDLS +P + + + F++T Y+ +
Sbjct: 449 FSSAEFYEQGLTA---DPSVASHLLSDLSEVTPTDRTSTA----LEFIDTAG-AGYDERA 500
Query: 1211 --DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTI 1268
++ NP EA L+ K+ L + + I II+PY +Q L+R L + +++ TI
Sbjct: 501 GSSQESRENPQEAELVVKLALALRDAGVAAEAIAIISPYAAQVRLLRRLLDGTLIDVDTI 560
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSL--LGDWHRINVALTRAKKKLIMVGSCRTL 1324
D +QGR+ + +++S VRS N T + L D R+NVA+TRA++KLI++G T+
Sbjct: 561 DGFQGRESEAVIISLVRS-----NATGEIGFLADVRRMNVAITRARRKLIIIGDSATI 613
>gi|351709407|gb|EHB12326.1| DNA-binding protein SMUBP-2 [Heterocephalus glaber]
Length = 982
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 277/573 (48%), Gaps = 86/573 (15%)
Query: 823 TLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HE 879
+ SGD V L ++ +A+G++T I++ VSV+F + S D L
Sbjct: 82 SFTSGDIVGLYDSANEGGQLATGILTRITQRSVSVAF---------DESHDFHLTLDREN 132
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
++R+ K ++ ++ LV L S +S L ++ AP S + L++
Sbjct: 133 LYRLLKLANDVTYKRLKKALVALKKYHSGPASPLIEVLFGGSAP-----SPAQKISPLTF 187
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ +L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 188 YNT--TLDPSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEVILQTVKQGLKVLCCAPSN 245
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV-- 1051
AVDNL+ +L +R+G + + IQ+HCL A+ S V +I+K +DQV
Sbjct: 246 IAVDNLVERLARCKQRILRLGHPARLLESIQQHCLDAVLSRSDSAQIVADIRKDIDQVFV 305
Query: 1052 ----------------------------------------KVVAVTCLGITN----PLLT 1067
VV T G + LL
Sbjct: 306 KNKKTQDKKDKSNFRNEIKLLRKELKEREEAAMVESLTEASVVLATNTGASADGPLKLLP 365
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE GQ PL+ A K +L GDH QLPP S +A + G+ +SL R
Sbjct: 366 ESYFDVVVIDECGQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAAQEGLSLSLMER 425
Query: 1128 LSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+EEH + + L QYRM Q IM ++ +Y +L+ + + + DL +
Sbjct: 426 LAEEHGDRVVRTLTVQYRMHQAIMRWASEAMYRGQLTAHPSVVGHL---LRDLPGVAATE 482
Query: 1187 KEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ + P++ V+T + E +D Q+ NP E L++ Q LV ++ DI +I
Sbjct: 483 ETGI----PLLLVDTASCGLFELEEEDEQSRGNPGEVRLVSMHIQALVDAGVQAGDIAVI 538
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
TPYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+ R L +
Sbjct: 539 TPYNLQVDLLRQSLGHKHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEER 595
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RINVA+TRA++ + ++ RT++ P LK L++
Sbjct: 596 RINVAVTRARRHVAVICDSRTVNTHPFLKTLVD 628
>gi|448329415|ref|ZP_21518714.1| DNA replication factor Dna2 [Natrinema versiforme JCM 10478]
gi|445613921|gb|ELY67607.1| DNA replication factor Dna2 [Natrinema versiforme JCM 10478]
Length = 912
Score = 204 bits (520), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/401 (33%), Positives = 209/401 (52%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 534 NERQNEAVTKAVGAEDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 593
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q D VR+G + +++ + L E+ L +VVA T
Sbjct: 594 EALLEQLDDVIDEDRVVRVGSESGIRDDMEPYRLE--RAGDPEDRVATLQNSQVVAATTS 651
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ +++FD ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 652 TCGSRIMKEQQFDAALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----END 707
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL E HP+A L QYRM Q I ++ Y RL + ++A+ + DL
Sbjct: 708 LTESLFERLVELHPEAGVMLDRQYRMNQRIQVFASTEFYDGRLRPATPDVASRNL--DDL 765
Query: 1180 SSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S L E L PV FV+ + D + EA IA++ + +E
Sbjct: 766 EGVSRDGLPETLRD--PVSFVDVE-------GDRSRYTDSEEAARIAELIKTYEAAGLER 816
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+IG+I P+ +Q + I + V + T+D++QG ++ I+VSF T SL
Sbjct: 817 SEIGVIAPFRAQVSEISKHVP-DDVAVDTVDRFQGSSQEVIIVSF--------TATGSLE 867
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 868 GPIFEDYRRINVALTRPKRALVLVGDSSALASDPVYERMLE 908
Score = 40.8 bits (94), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 116/291 (39%), Gaps = 49/291 (16%)
Query: 400 QSGEERAVHLWEDWFHT--VIAPGDTVNVIG--EFDDQGKCDVGREN-NFLIVHPDVLVS 454
+S E V LW W + ++ G + V E + QG+ ++++V P LVS
Sbjct: 57 ESRETTTVTLWNKWTESAELLEQGMELLVTNAKEEEYQGETQYATTGESYVVVEPSFLVS 116
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLV 514
T + CPR L+ +L + + GTL+H++F ++ + LEE
Sbjct: 117 VTSIRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-----GDLLRGRDLEESIDAR 170
Query: 515 LQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKIS 574
+++ L G + + + + E + W+ Q T + S+ +L IS
Sbjct: 171 VEERGLQLGLLGETPDAVKEEIRENAKAIEGWL-----EQGRLTEEDSWRSE---QLLIS 222
Query: 575 EVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRA 634
E +G++G DA R P+E KTGK + + +
Sbjct: 223 ET-----------FGIRGRADAVRRGA-------------PVELKTGKNLKKEPRFKDKV 258
Query: 635 QVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA 685
Q Y LL+ E + +D G L Y T+ + R++ G + EF+
Sbjct: 259 QAACYALLLEE-HGGDVDIGTLLY-----TKNSALDRNEETGDLTPAKEFS 303
>gi|448369174|ref|ZP_21555941.1| helicase [Natrialba aegyptia DSM 13077]
gi|445651717|gb|ELZ04625.1| helicase [Natrialba aegyptia DSM 13077]
Length = 960
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 210/419 (50%), Gaps = 56/419 (13%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ K + A D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 565 NDAQDEAVRKAVGADDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 624
Query: 1006 IKLKSQSID-------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTC 1058
L Q +D VR+G V +++Q + L E L +VVA T
Sbjct: 625 EALLDQ-LDGVIEEERIVRVGSESGVREDMQPYRLD--RAGEPGERAATLQNAQVVAATT 681
Query: 1059 LGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST----- 1113
+ ++ +++FD ++DEA Q T P + + A +FVLVGDH QLPP+VQS
Sbjct: 682 ATCGSRVMKEQRFDAALVDEAAQLTEPGTHAAINLADRFVLVGDHEQLPPVVQSEGGTRR 741
Query: 1114 --------EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
E R + SLF RL + +P+A L QYRM Q I ++ Y +L
Sbjct: 742 VSSGANGDEPRAADLTESLFERLVDRYPEAGVMLTKQYRMNQRIQAFASQEFYDGKLRPA 801
Query: 1166 SDEIANAKIKVSDLSSCS-----PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVE 1220
+ ++A + DLS + P L++A V FV+ D D + E
Sbjct: 802 TGDVAGRTL--DDLSGVAREDLPPELRDA------VTFVDVD-------GDGSRYTDGEE 846
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCIL 1280
A IA++ +E ++ DIG+I P+ +Q + + + V + T+D++QG ++ I+
Sbjct: 847 AARIAEMVEEYRAAGLDAADIGVIAPFRAQVSELSKHVP-EEVAVDTVDRFQGSSQEVII 905
Query: 1281 VSFVRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
VSF T SL G D+ RINVALTR K+ L++VG L+ P+ ++
Sbjct: 906 VSF--------TATDSLEGPIFEDYRRINVALTRPKRALVLVGDANALATDPVYSRMLE 956
Score = 44.3 bits (103), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 130/318 (40%), Gaps = 31/318 (9%)
Query: 374 EVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHT--VIAPGDTVNVIGEFD 431
+V+ P D + ++ L ++ + + LW W + ++ PG + V +
Sbjct: 41 DVTATTSPFDAAETETDGGTLSDGAARAADPTTITLWNKWTESAELLEPGMELLVTDAEE 100
Query: 432 DQGKCD---VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTL 488
D+ + + +++++V P V+ T + + CPR L+ +L + + GTL
Sbjct: 101 DEFRGEQRYATTGDSYVVVAPSFHVNVTAIRSWVECPRLYYLN-KLSGVPLNYPVVKGTL 159
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
+H++F ++ + LEE +++ L G + + + + E + W+
Sbjct: 160 VHEVF-----GDLLRGRDLEESIDARVEERGLELGLLGETADAVAEDVRENATAIEGWLE 214
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVT-DIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
+ + + V D +E + E++ + +G++G DA R
Sbjct: 215 QGRLTAENEETAVTADDDSEAAFTPAESSWRSEQLLISETFGIRGRADAVRRGA------ 268
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
P+E KTGK + + + Q Y LL+ E + +D+G L Y T+
Sbjct: 269 -------PVELKTGKNLKKEPRFKDKVQAACYALLLEE-HGGDVDTGTLLY-----TKNS 315
Query: 668 MVQRSDLVGLIMRRNEFA 685
+ R++ G + EF+
Sbjct: 316 ALDRNEETGDLTPAKEFS 333
>gi|448356664|ref|ZP_21545391.1| helicase [Natrialba chahannaoensis JCM 10990]
gi|445652776|gb|ELZ05659.1| helicase [Natrialba chahannaoensis JCM 10990]
Length = 988
Score = 204 bits (519), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/398 (33%), Positives = 208/398 (52%), Gaps = 31/398 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + A+DYALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 609 NEAQDEAVRTAVGAEDYALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 668
Query: 1006 IKLKSQ---SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q ID +R+G V +++Q + S + L +VVA T
Sbjct: 669 EALLDQLEGVIDEERIIRVGSESGVREDMQPYRFDRSGDPS--DRAAALQNAQVVAATTA 726
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 727 TCGSRVMKEQAFDVALVDEAAQLTEPGTFAAVNLADRFVLVGDHEQLPPVVRA----END 782
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL E HP+A L QYRM Q I ++ Y +L + E+A + DL
Sbjct: 783 LTESLFERLVELHPEAGVMLTQQYRMNQRIQAFASQEFYDGKLRPANGEVAGRTL--DDL 840
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
S S +E L P + A E + + + EA IA + ++ ++
Sbjct: 841 SGVS---REEL----PASLRDAVSFVAVEGEASR-YTDSAEAVRIADLIEDYCTAGLDPS 892
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSL 1297
DIG+I P+ +Q + I + SV + T+D++QG ++ I+VSF + E P +
Sbjct: 893 DIGVIAPFRAQVSEISRHVP-ESVAVDTVDRFQGSSQEVIIVSFTATGTLEGP------I 945
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D+ RINVALTR K+ L++VG L P+ ++
Sbjct: 946 FDDYRRINVALTRPKRALVLVGDPNALETDPVYARMLE 983
>gi|417405556|gb|JAA49487.1| Putative dna replication helicase [Desmodus rotundus]
Length = 1000
Score = 204 bits (518), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 282/580 (48%), Gaps = 87/580 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD-SLLHE-V 880
+L SGD V L E +LA +G++T I++ V+V+F + S D SL HE
Sbjct: 82 SLSSGDIVGLYGEGGQLA--TGVLTRITQKSVTVAF---------DQSCDFQLSLDHENS 130
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQ-SSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+ K ++ ++ L+ L A +S L ++ AP S + Q PA
Sbjct: 131 YRLLKLANDVTYKRLKTALIDLRKHRASPASSLIEVLFGDAAP---SPASDIQAPA---- 183
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ SL+ Q+ A++ L+ ++ A+I G PGTGKT+T+V + + RG +L + +N
Sbjct: 184 FYNPSLDASQQEAVLFALSQRELAIIHGPPGTGKTTTVVEIILQAVERGLKVLCCAPSNV 243
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV--- 1051
AVDNL+ L +R+G + + IQ+HCL A + V +I++ +DQV
Sbjct: 244 AVDNLVEALARCGRRVLRLGHPARLLESIQQHCLDAALSRGDSTQIVADIRRDIDQVLVK 303
Query: 1052 ---------------------------------------KVVAVTCLGITNP----LLTD 1068
V+ T G ++ LL D
Sbjct: 304 LKKTQDKREKSNFRNEVKLLRKELKEREEAATLESLRSADVILATNTGASSDGPLRLLPD 363
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FD+ ++DE Q PL+ ASK +L GDH QLPP V S +A + G+ +SL RL
Sbjct: 364 DFFDMVVVDECAQALEASCWVPLLKASKCILAGDHKQLPPTVVSPKAAQEGLSLSLMERL 423
Query: 1129 SEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+ + + L QYRM + IM+ ++ +Y +L+ + A+ + DL + +
Sbjct: 424 AGQCGAGVLRTLTVQYRMHRAIMQWASEALYEGQLTA---HPSVAERLLRDLPGVAATEE 480
Query: 1188 EALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L P++ V+T L E +D Q+ NP E L++ Q LV + DI +IT
Sbjct: 481 TGL----PLLLVDTAGCGLSELEQEDDQSRGNPGEVRLVSLHVQALVDAGVRASDIAVIT 536
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 537 PYNLQVDLLRQSLTHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 593
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + ++ RT+S P LK L++ E +
Sbjct: 594 INVAVTRARRHVAVICDSRTVSNHPFLKTLVDYFTEHGEV 633
>gi|354610755|ref|ZP_09028711.1| AAA ATPase [Halobacterium sp. DL1]
gi|353195575|gb|EHB61077.1| AAA ATPase [Halobacterium sp. DL1]
Length = 913
Score = 203 bits (517), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 207/398 (52%), Gaps = 21/398 (5%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ + L A+D+AL+ G PGTGKT T+ ++A + RG +LL+++TN AVDN L
Sbjct: 524 NEAQNAAVSRALNAEDFALVHGPPGTGKTYTIATLIQAFVERGDRVLLSAFTNRAVDNAL 583
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V ++++ L+ + E + L+ VVA T +
Sbjct: 584 EALREQGYEDIVRVGTSTGVREDMEDLRLNQSGDPA--ERARALESADVVAATTSTSGSR 641
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ +++FDV ++DEA Q T P +L + +FVLVGDH QLPP+V+S + SL
Sbjct: 642 VMREQEFDVVLVDEASQLTEPDTLAAINRGERFVLVGDHEQLPPVVRSG----GRLSESL 697
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS- 1183
F+RL E +P+A L QYRM Q I S+ Y +L + E+A + + +
Sbjct: 698 FQRLVETNPEAAVMLDQQYRMSQRIQAFSSDEFYDGQLRPATAEVAGQTLADLGIETGGA 757
Query: 1184 -----PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
P + R + E D ++ PVEA + I +E V ++
Sbjct: 758 VRNGVPASDASGGSSRKHSVRDGVSFHDVEGTDDAHVD-PVEAERVGDIVREYVDAGLDP 816
Query: 1239 KDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
D+G+I P+ +Q A + RH V + T+D++QG K+ I+VSFV + +
Sbjct: 817 ADVGVIAPFRAQVAEIGRHV--PDGVSVDTVDRFQGSSKEVIVVSFVATG----TLDGPI 870
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D R+NVALTRAKK L++VG L PL +++
Sbjct: 871 FEDHRRVNVALTRAKKSLVLVGDETALRSEPLYDRMVD 908
>gi|448332339|ref|ZP_21521583.1| DNA replication factor Dna2 [Natrinema pellirubrum DSM 15624]
gi|445627443|gb|ELY80767.1| DNA replication factor Dna2 [Natrinema pellirubrum DSM 15624]
Length = 954
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 211/418 (50%), Gaps = 56/418 (13%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 561 NERQNEAVRKAVGAEDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 620
Query: 1006 IKLKSQ---------------------SIDFVRIGRHEVVHKEIQKHCLSAMN--INSVE 1042
L Q ++D VR+G V E++ + L + V
Sbjct: 621 EALLEQLEDVIDEDSVASETQRSGDGEAVDVVRVGSESGVSDEMEPYRLERAGEPADRVA 680
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
E L+ +VVA T + ++ ++ FD ++DEA Q T P + + A +FVLVGD
Sbjct: 681 E----LEDAQVVAATTATCGSRIMKEQAFDAALVDEAAQLTEPGTCAAINLAERFVLVGD 736
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
H QLPP+V++ EN + SLF RL E +P A L QYRM Q I ++ Y +L
Sbjct: 737 HEQLPPVVRA----ENDLTESLFERLVERYPDAGVMLDRQYRMNQRIQVFASTEFYDGQL 792
Query: 1163 SCGSDEIANAKIKVSDLSSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
+ E+A + DL S L E L+ PV FV+ + D + EA
Sbjct: 793 RPATPEVAGRTL--DDLEGVSRDALPETLSD--PVSFVDVE-------GDRSQYTDSEEA 841
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILV 1281
IA + + +E DIG+I P+ +Q + I ++ V + T+D++QG ++ I+V
Sbjct: 842 ERIADLIERYEAAGLERSDIGVIAPFRAQVSEISSTVP-DDVTVDTVDRFQGSSQEVIIV 900
Query: 1282 SFVRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
SF T SL G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 901 SF--------TATGSLEGPIFEDYRRINVALTRPKRALVLVGDSSALASDPVYERMLE 950
Score = 45.4 bits (106), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 55/322 (17%)
Query: 402 GEERAVHLWEDWFHT--VIAPGDTVNVIG--EFDDQGKCDVGREN-NFLIVHPDVLVSGT 456
G E V LW W + ++ PG + V E + QG+ ++++V P LVS T
Sbjct: 86 GRETTVTLWNKWTESAELLEPGMELVVTNAKEEEYQGETQYKTTGESYVVVEPSFLVSVT 145
Query: 457 RVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ 516
+ CPR L+ +L + + GTL+H++F L++ + LEE ++
Sbjct: 146 SIRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-GDLLR----GRDLEESIDARVE 199
Query: 517 KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEV 576
+ L G + + + + E + W+ Q T + S+ +L ISE
Sbjct: 200 ERGLQLGLLGETPDAVKEEIRENAKAIEGWL-----EQGRLTEEDSWRSE---QLLISET 251
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
+G++G DA R P+E KTGK + + + Q
Sbjct: 252 -----------FGIRGRADAVRRGA-------------PVELKTGKNLKKEPRFKDKVQA 287
Query: 637 ILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVMVQRSDLV---GLIMRRNEFANDI 688
Y LL+ E + +D G L Y L ++ G + + GL+ N+I
Sbjct: 288 ACYALLLEE-HGGDVDIGTLLYTKNSALDRNEETGDLTPAKEFTMGDGLLKYVVRLRNEI 346
Query: 689 IKASTTQQLPPMLRAYGGNKEC 710
T+ ++P Y + +C
Sbjct: 347 AAKETSGEIPT---GYEADAKC 365
>gi|433590254|ref|YP_007279750.1| DNA/RNA helicase, superfamily I [Natrinema pellirubrum DSM 15624]
gi|433305034|gb|AGB30846.1| DNA/RNA helicase, superfamily I [Natrinema pellirubrum DSM 15624]
Length = 925
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/418 (33%), Positives = 211/418 (50%), Gaps = 56/418 (13%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 532 NERQNEAVRKAVGAEDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 591
Query: 1006 IKLKSQ---------------------SIDFVRIGRHEVVHKEIQKHCLSAMN--INSVE 1042
L Q ++D VR+G V E++ + L + V
Sbjct: 592 EALLEQLEDVIDEDSVASETQRSGDGEAVDVVRVGSESGVSDEMEPYRLERAGEPADRVA 651
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGD 1102
E L+ +VVA T + ++ ++ FD ++DEA Q T P + + A +FVLVGD
Sbjct: 652 E----LEDAQVVAATTATCGSRIMKEQAFDAALVDEAAQLTEPGTCAAINLAERFVLVGD 707
Query: 1103 HYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
H QLPP+V++ EN + SLF RL E +P A L QYRM Q I ++ Y +L
Sbjct: 708 HEQLPPVVRA----ENDLTESLFERLVERYPDAGVMLDRQYRMNQRIQVFASTEFYDGQL 763
Query: 1163 SCGSDEIANAKIKVSDLSSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA 1221
+ E+A + DL S L E L+ PV FV+ + D + EA
Sbjct: 764 RPATPEVAGRTL--DDLEGVSRDALPETLSD--PVSFVDVE-------GDRSQYTDSEEA 812
Query: 1222 CLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILV 1281
IA + + +E DIG+I P+ +Q + I ++ V + T+D++QG ++ I+V
Sbjct: 813 ERIADLIERYEAAGLERSDIGVIAPFRAQVSEISSTVP-DDVTVDTVDRFQGSSQEVIIV 871
Query: 1282 SFVRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
SF T SL G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 872 SF--------TATGSLEGPIFEDYRRINVALTRPKRALVLVGDSSALASDPVYERMLE 921
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 127/322 (39%), Gaps = 55/322 (17%)
Query: 402 GEERAVHLWEDWFHT--VIAPGDTVNVIG--EFDDQGKCDVGREN-NFLIVHPDVLVSGT 456
G E V LW W + ++ PG + V E + QG+ ++++V P LVS T
Sbjct: 57 GRETTVTLWNKWTESAELLEPGMELVVTNAKEEEYQGETQYKTTGESYVVVEPSFLVSVT 116
Query: 457 RVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ 516
+ CPR L+ +L + + GTL+H++F L++ + LEE ++
Sbjct: 117 SIRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-GDLLR----GRDLEESIDARVE 170
Query: 517 KNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEV 576
+ L G + + + + E + W+ Q T + S+ +L ISE
Sbjct: 171 ERGLQLGLLGETPDAVKEEIRENAKAIEGWL-----EQGRLTEEDSWRSE---QLLISET 222
Query: 577 TDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQV 636
+G++G DA R P+E KTGK + + + Q
Sbjct: 223 -----------FGIRGRADAVRRGA-------------PVELKTGKNLKKEPRFKDKVQA 258
Query: 637 ILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVMVQRSDLV---GLIMRRNEFANDI 688
Y LL+ E + +D G L Y L ++ G + + GL+ N+I
Sbjct: 259 ACYALLLEE-HGGDVDIGTLLYTKNSALDRNEETGDLTPAKEFTMGDGLLKYVVRLRNEI 317
Query: 689 IKASTTQQLPPMLRAYGGNKEC 710
T+ ++P Y + +C
Sbjct: 318 AAKETSGEIPT---GYEADAKC 336
>gi|444911444|ref|ZP_21231619.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
gi|444718202|gb|ELW59018.1| Superfamily I DNA/RNA helicase [Cystobacter fuscus DSM 2262]
Length = 640
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 162/562 (28%), Positives = 255/562 (45%), Gaps = 92/562 (16%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE-VWRIDKDEIMTSFSVMRYNLV 900
A L+T + V ++F + +HE + R+D+ ++ MR L
Sbjct: 96 ARALVTRATATRVQLAFDR-----------SPPPFIHEGLLRLDRVPNDVTYERMRAGLS 144
Query: 901 QL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
++ L + R +++ E PRFDS L + LN +Q A+ + L A
Sbjct: 145 RVKALDKGLGRRKREVLLGNEPPRFDS---------LREFTPSRPLNPEQHDAVARALAA 195
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
+D+ L+ G PGTGK++ + + +G +L + +N+AVD+LL + + VR+G
Sbjct: 196 EDFFLVHGPPGTGKSTVLAEVAAQAVAQGQRLLCAAASNAAVDHLLDLCLDKGLRAVRVG 255
Query: 1020 RHEVVHKEIQKHCL------------------SAMNI---------------------NS 1040
V +Q+H L A ++ S
Sbjct: 256 HPARVTPRLQEHTLDLIVEDHPDRVLSRELFDEAFSLLGYARRQRTQGRSRERFSNARAS 315
Query: 1041 VEEIKKRLDQVK---------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
E K LD+ + VV VT + + +L ++FD+ ++DEA Q+T P
Sbjct: 316 TTEAKGMLDEARALERKAVRNVLERAQVVCVTLASLDSGVLAHEEFDLALLDEAAQSTEP 375
Query: 1086 VSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS-ALQSQYR 1144
++L + A K VL GD QLPP + S EA + G+ +SLF RL +H + L+ QYR
Sbjct: 376 LALLGFLRAPKVVLAGDPQQLPPTILSPEAAKAGLAVSLFERLLADHGDGVKRMLREQYR 435
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT--D 1202
M IM + +YG L A+ + L+ P EA PV++++T
Sbjct: 436 MNTAIMTFPSKEMYGGELR------AHPSVAGRTLADVLP--PEAQGDFPPVLYLDTAGK 487
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS 1262
+ KD +L N EA LI +EL+ I +++ +ITPY +QA+ +R + S
Sbjct: 488 GFEEEQEKDTGSLFNTGEADLIVARVKELLAAGIAPRELAVITPYRAQAHALRERVEPLS 547
Query: 1263 --VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
VE+ T+D +QGR+KD ILVS VRS+ L D R+NVALTRA++ L +VG
Sbjct: 548 PDVEVDTVDAFQGREKDAILVSLVRSNS---EGQIGFLSDLRRMNVALTRARRHLFVVGD 604
Query: 1321 CRTLSKVPLLKLLINKVGEQSG 1342
TLS I E +G
Sbjct: 605 SATLSGHAFYARFIESTQEGAG 626
>gi|448341327|ref|ZP_21530289.1| DNA replication factor Dna2 [Natrinema gari JCM 14663]
gi|445628374|gb|ELY81682.1| DNA replication factor Dna2 [Natrinema gari JCM 14663]
Length = 921
Score = 203 bits (516), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 213/412 (51%), Gaps = 49/412 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K ++A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 533 NERQNEAVTKAVSAEDCALIHGPPGTGKTYTIARAIRAMVDRGERVLLSAFTNRAVDNAL 592
Query: 1006 IKLKSQ----------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
+ Q ++D VR+G + +++ + L E+ L
Sbjct: 593 AAVLEQLEDGDASQTQGTGDGNAVDIVRVGSESGIRDDMEPYRLE--RAGDPEDRAAELR 650
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+VVA T + ++ +++FDV ++DEA Q T P + + A +FVLVGDH QLPP+
Sbjct: 651 NAQVVAATTSTCGSRVMKEQEFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPV 710
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V++ EN + SLF RL E +P A L QYRM Q I ++ Y +L + +
Sbjct: 711 VRA----ENDLTESLFERLVERYPGAGVMLDRQYRMNQRIQVFASNEFYDGQLRPATPAV 766
Query: 1170 ANAKIKVSDLSSCSPWLKEAL-NPCR-PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
A + DL+ S ++AL P R PV F++ + D + EA IA +
Sbjct: 767 AARTL--DDLAGVS---RDALPEPLRDPVSFIDVE-------GDRGQYTDSEEAARIAAL 814
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ ++ DIG+I P+ +Q + I + V + T+D++QG ++ I+VSF
Sbjct: 815 IETYEDAGLDRTDIGVIAPFRAQVSEISAHVP-DDVAVDTVDRFQGSSQNVIIVSF---- 869
Query: 1288 ENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
T SL G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 870 ----TATGSLEGPIFEDYRRINVALTRPKRALVLVGDAAALASEPVYERMLE 917
>gi|448500080|ref|ZP_21611559.1| DNA replication factor Dna2 [Halorubrum coriense DSM 10284]
gi|445696802|gb|ELZ48881.1| DNA replication factor Dna2 [Halorubrum coriense DSM 10284]
Length = 898
Score = 203 bits (516), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 250/982 (25%), Positives = 407/982 (41%), Gaps = 170/982 (17%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V LW W T PG + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTLWGKWTETAEHAEPGMELLVTDPEEDEYRGETGYATSDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L++ + +EE V
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-GDLLRGMELEASVEER---VA 150
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
+ +E L G ++ + + W+ ++
Sbjct: 151 EAGLE-LGLLGYETAEVEDEVRRNAAAVEGWL--------------------------AQ 183
Query: 576 VTDIEEMAW-------APKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQS 628
T +E W +P +GLKG DA R P+E KTGK +
Sbjct: 184 GTLADEDTWRSEFSLISPTFGLKGRADALRRGT-------------PVELKTGKNTKREP 230
Query: 629 SMEHRAQVILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVG 676
+ Q Y L++ ER + D G L Y L ++ G + V R L
Sbjct: 231 RFHDKVQAACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEF 289
Query: 677 LIMRRNEFANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHW 735
++ RN A +A + P + Y + CS Y C +
Sbjct: 290 VVRERNALAAMEWRALDDPGERPTVPTGYEADATCS----------YCFEQDACMVVSG- 338
Query: 736 DRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQ 795
+D E+K Q+ R ++F ++ E ++++ + R ++
Sbjct: 339 --RLDQESKAGQIGTPIPDAER----DYFDRFYVAL----EEERRETHAEYRKLWE---- 384
Query: 796 HMPSPNLNASDGDSLIG----------------AAIPTKDMDCTLRSGDYVILSTESDRL 839
+P A+D +LIG A D LR GD V L+++ D +
Sbjct: 385 --QTPEERAADDRALIGLEPVAQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPV 441
Query: 840 AVAS--GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
A + G IT + V V +P+ E+ R+D + SV R
Sbjct: 442 AGHAELGRITALGGDEVVVETDEPV----------------ELRRLDV--YPSEISVDR- 482
Query: 898 NLVQLFLQSAQSSQLRRMIV-DLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
+L L + R+ +V P F + D +YI N Q A+
Sbjct: 483 SLTALHDAVLKGDPDRKDVVFGRRDPEFRDPADRPVDAPETYI----DNNAAQNEAVSLA 538
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
+ A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V
Sbjct: 539 VDAEDCALIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDDV 598
Query: 1017 -RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
R+G V +++ L + + + R V G + ++ + +FDV +
Sbjct: 599 LRVGTETGVRDDMRDVRLVQRGEPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVAL 656
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q T P + + A +FVLVGDH QLPP+V++ EN + SLF+RL E +P A
Sbjct: 657 VDEASQLTEPGTHAAINLADRFVLVGDHEQLPPVVRA----ENDLTTSLFQRLIEAYPDA 712
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--C 1193
L QYRM Q I ++A Y L + E+A + +DL P +AL P
Sbjct: 713 SVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPDLT 766
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
V FV+ P E ++ + EA +A I V ++ DIG+I P+ +Q
Sbjct: 767 GGVGFVD----PGGERDGNRNVR---EAERVAAIVDAYVAAGVDPDDIGVIAPFRAQVAE 819
Query: 1254 IRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
I + + T+D++QG K+ I+VS V + + + D R+NVALTRAKK
Sbjct: 820 IGRRTDAT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFEDHRRMNVALTRAKK 872
Query: 1314 KLIMVGSCRTLSKVPLLKLLIN 1335
+L +VG L P +++
Sbjct: 873 QLTLVGDADALGTDPFYARMLD 894
>gi|448338500|ref|ZP_21527547.1| DNA replication factor Dna2 [Natrinema pallidum DSM 3751]
gi|445622814|gb|ELY76259.1| DNA replication factor Dna2 [Natrinema pallidum DSM 3751]
Length = 911
Score = 202 bits (515), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 216/416 (51%), Gaps = 43/416 (10%)
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+DP ++I + N+ Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +
Sbjct: 523 EDPEETFIDN----NERQNEAVTKAVGARDCALIHGPPGTGKTYTIARAIRAMVERGERV 578
Query: 992 LLTSYTNSAVDNLLIKLKSQ---SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
LL+++TN AVDN L L Q ID VR+G + +++ + L E+
Sbjct: 579 LLSAFTNRAVDNALEALLDQLAGVIDEERVVRVGSESGIRNDMEPYRLE--RAGDPEDRA 636
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
L +VVA T + ++ ++ FDV ++DEA Q T P + + A +FVLVGDH Q
Sbjct: 637 AELRNAQVVAATTSTCGSRVMKEQAFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQ 696
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
LPP+V++ EN + SLF RL +P+A L QYRM Q I ++ Y +L
Sbjct: 697 LPPVVRA----ENDLTESLFERLVGRYPEAGVMLDRQYRMNQRIQAFASTEFYDGQLRPA 752
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEAL-NPCR-PVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
+ +A + DL+ S ++AL P R PV FV+ + D + EA
Sbjct: 753 TPTVAARTL--DDLAGVS---RDALPEPLRDPVSFVDVE-------GDRGRYTDSEEAAR 800
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSF 1283
IA + + ++ DIG+I P+ +Q + I + V + T+D++QG ++ I+VSF
Sbjct: 801 IAALIETYEDAGLDRADIGVIAPFRAQVSEISAHVP-DDVAVDTVDRFQGSSQEVIIVSF 859
Query: 1284 VRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
T SL G D+ RINVALTR K+ L++VG L P+ + ++
Sbjct: 860 --------TATGSLEGPIFEDYRRINVALTRPKRALVLVGDAAALGSDPVYERMLE 907
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 116/289 (40%), Gaps = 52/289 (17%)
Query: 403 EERAVHLWEDWFHT--VIAPGDTVNVIG----EFDDQGK-CDVGRENNFLIVHPDVLVSG 455
E V LW W + ++ PG V V E+D + + G +++++V P LVS
Sbjct: 58 ETTTVTLWNKWTESADLLEPGMDVLVTNAKEEEYDGETQYATTG--DSYVVVEPSFLVSV 115
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + CPR L+ +L + + GTL+H++F ++ + LE+ +
Sbjct: 116 TSIRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-----GDLLRGRDLEDSIAARV 169
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
++ L G + + + + E + W L +D DG +
Sbjct: 170 EERGLQLGLLGETADAVAEDVRENATAIEGW---------LQQGRLDESEDGWRS----- 215
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
E++ + +G++G DA R P+E KTGK + + + Q
Sbjct: 216 ----EQLLISETFGIRGRADAVRRGA-------------PVELKTGKNLKKEPRFKDKVQ 258
Query: 636 VILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEF 684
Y LL+ E + +D G L Y T+ ++ R++ G + EF
Sbjct: 259 AACYALLLEE-HGGDVDIGTLLY-----TKNSVLDRNEETGDLNPAKEF 301
>gi|73983575|ref|XP_540807.2| PREDICTED: DNA-binding protein SMUBP-2 [Canis lupus familiaris]
Length = 1010
Score = 202 bits (515), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 173/580 (29%), Positives = 279/580 (48%), Gaps = 85/580 (14%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSF--SKPLRLPGRNSSSDADSLLHEV 880
+ SGD V L E ++LA +G++T I++ V+V+F S +L S D D
Sbjct: 82 SFTSGDIVGLYDEGNQLA--TGILTRITQRSVTVAFDASHDFQL-----SLDRDR--ERA 132
Query: 881 WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+ K ++ ++ L+ L S +S L ++ AP S + +P L
Sbjct: 133 YRLLKLANDITYKRLKKALITLKKYHSGPASSLIEVLFGGSAPSPASNT----EPPL--- 185
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 186 FCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNI 245
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV--- 1051
AVDNL+ +L +R+G + + IQ+H L A+ N V +I+K +DQ
Sbjct: 246 AVDNLVERLARCKQKILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFVN 305
Query: 1052 ---------------------------------------KVVAVTCLGITN----PLLTD 1068
VV T G ++ LL D
Sbjct: 306 NRQTQDRREKSSVWNEVKLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPD 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL RL
Sbjct: 366 THFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERL 425
Query: 1129 SEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+EEH + + L QYRM Q IM ++ +Y +L+ +A ++ DL + +
Sbjct: 426 AEEHGARVVRTLTVQYRMHQAIMRWASEALYHGQLTA-HPSVAGHLLR--DLPGVAATEE 482
Query: 1188 EALNPCRPVIFVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T +E + D Q+ NP E L++ Q LV ++ DI +IT
Sbjct: 483 TGI----PLLLVDTAGCGLFELEDDDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVIT 538
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 539 PYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 595
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT+S LK L++ E +
Sbjct: 596 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVDHFTEHGEV 635
>gi|397773773|ref|YP_006541319.1| DNA replication factor Dna2 [Natrinema sp. J7-2]
gi|397682866|gb|AFO57243.1| DNA replication factor Dna2 [Natrinema sp. J7-2]
Length = 921
Score = 202 bits (514), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/412 (32%), Positives = 212/412 (51%), Gaps = 49/412 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 533 NERQNEAVTKAVGAEDCALIHGPPGTGKTYTIARAIRAMVDRGERVLLSAFTNRAVDNAL 592
Query: 1006 IKLKSQ----------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
+ Q ++D VR+G + +++ + L E+ L
Sbjct: 593 AAVLEQLEDGDASQTQGTGDGNAVDIVRVGSESGIRDDMEPYRLE--RAGDPEDRAAELR 650
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+VVA T + ++ +++FDV ++DEA Q T P + + A +FVLVGDH QLPP+
Sbjct: 651 NAQVVAATTSTCGSRVMKEQEFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPV 710
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V++ EN + SLF RL E +P A L QYRM Q I ++ Y +L + +
Sbjct: 711 VRA----ENDLTESLFERLVERYPGAGVMLDRQYRMNQRIQVFASNEFYDGQLRPATPAV 766
Query: 1170 ANAKIKVSDLSSCSPWLKEAL-NPCR-PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
A + DL+ S ++AL P R PV F++ + D + EA IA +
Sbjct: 767 AARTL--DDLAGVS---RDALPEPLRDPVSFIDVE-------GDRGQYTDSEEAARIATL 814
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ ++ DIG+I P+ +Q + I + V + T+D++QG ++ I+VSF
Sbjct: 815 IETYEDAGLDRTDIGVIAPFRAQVSEISAHVP-DDVAVDTVDRFQGSSQNVIIVSF---- 869
Query: 1288 ENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
T SL G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 870 ----TATGSLEGPIFEDYRRINVALTRPKRALVLVGDAAALASEPVYERMLE 917
>gi|448348645|ref|ZP_21537493.1| helicase [Natrialba taiwanensis DSM 12281]
gi|445642306|gb|ELY95374.1| helicase [Natrialba taiwanensis DSM 12281]
Length = 975
Score = 202 bits (513), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/433 (31%), Positives = 210/433 (48%), Gaps = 69/433 (15%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ K + A D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 565 NDAQDEAVRKAVGADDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 624
Query: 1006 IKLKSQ---------------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
L Q ++D VR+G V +++Q + L E
Sbjct: 625 EALLDQLDGEIGEDSVASPAQRNGDGEAVDVVRVGSESGVREDMQPYRLD--RAGDPGER 682
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
L +VVA T + ++ +++FD ++DEA Q T P + + A +FVLVGDH
Sbjct: 683 AATLQNAQVVAATTATCGSRVMKEQRFDAALVDEAAQLTEPGTHAAINLADRFVLVGDHE 742
Query: 1105 QLPPLVQST-------------EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIME 1151
QLPP+VQS E R + SLF RL + +P+A L QYRM Q I
Sbjct: 743 QLPPVVQSEGGTRRVSSGANGDEPRAADLTESLFERLVDRYPEAGVMLTKQYRMNQRIQA 802
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLSSCS-----PWLKEALNPCRPVIFVNTDMLPA 1206
++ Y +L S ++A + DLS + L++A V FV+ D
Sbjct: 803 FASQEFYDGKLRPASGDVAGRTL--DDLSGVTRDDLPTELRDA------VTFVDVD---- 850
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIH 1266
D + EA IA++ +E ++ DIG+I P+ +Q + + + V +
Sbjct: 851 ---GDGSRYTDSEEAARIAEMVEEYRAAGLDAADIGVIAPFRAQVSELSKHVP-DEVAVD 906
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCR 1322
T+D++QG ++ I+VSF T SL G D+ RINVALTR K+ L++VG
Sbjct: 907 TVDRFQGSSQEVIIVSF--------TATDSLEGPIFEDYRRINVALTRPKRALVLVGDAN 958
Query: 1323 TLSKVPLLKLLIN 1335
L+ P+ ++
Sbjct: 959 ALATDPVYSRMLE 971
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 128/318 (40%), Gaps = 31/318 (9%)
Query: 374 EVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHT--VIAPGDTVNVIGEFD 431
+V+ P D + ++ L + + + LW W + ++ PG + V +
Sbjct: 41 DVTTTTSPFDAAETETDGGTLSDGGAHAADPTTITLWNKWTESAELLEPGMELLVTNAEE 100
Query: 432 DQGKCD---VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTL 488
D+ + + +++++V P V+ T + CPR L+ +L + + GTL
Sbjct: 101 DEFRGEQQYATTGDSYVVVAPSFHVNVTAIRNWVECPRLYYLN-KLSGVPLNYPVVKGTL 159
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
+H++F ++ + LEE +++ L G + + + + E + W+
Sbjct: 160 VHEVF-----GDLLRGRDLEESIDARVEERGLELGLLGETADAVAEDVRENATAIEGWLE 214
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVT-DIEEMAWAPKYGLKGMIDASIRVKIESKRN 607
+ + + G D +E + E++ + +G++G DA R
Sbjct: 215 QGRLTAENEETAATAGDDSEAAFTPAESSWRSEQLLISETFGIRGRADAVRRGA------ 268
Query: 608 EINGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
P+E KTGK + + + Q Y LL+ E + +D+G L Y T+
Sbjct: 269 -------PVELKTGKNLKKEPRFKDKVQAACYALLLEE-HGGDVDTGTLLY-----TKNS 315
Query: 668 MVQRSDLVGLIMRRNEFA 685
+ R++ G + EF+
Sbjct: 316 ALDRNEETGDLTPAKEFS 333
>gi|448399360|ref|ZP_21570657.1| DNA replication factor Dna2 [Haloterrigena limicola JCM 13563]
gi|445668981|gb|ELZ21597.1| DNA replication factor Dna2 [Haloterrigena limicola JCM 13563]
Length = 912
Score = 202 bits (513), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 135/400 (33%), Positives = 214/400 (53%), Gaps = 37/400 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N +Q A+ K + AKD ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 534 NRNQNEAVTKAVGAKDCALIHGPPGTGKTYTIAQAIRAMVERGERVLLSAFTNRAVDNAL 593
Query: 1006 ---IKLKSQSID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
++ + ID VRIG V +++ + L ++ +L +VVA T
Sbjct: 594 EATLEQLTAVIDDDQVVRIGSESGVREDMAPYRLE--RAGDPDDRVAKLQNAQVVAATTA 651
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 652 TCGSRVMKEQTFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----ENE 707
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + +P A L QYRM Q I ++ Y +L + +A+ + DL
Sbjct: 708 LSESLFERLVDLYPDAGVMLDRQYRMNQRIQAFASTEFYDGQLRPATSPVASRTL--DDL 765
Query: 1180 SSCSPWLKEALNPCR---PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEI 1236
S ++AL P R PV FVN + D + EA IA + + +
Sbjct: 766 EGVS---RDAL-PERLQDPVSFVNIE-------GDRSQYTDSEEAARIADLIESYEAAGL 814
Query: 1237 EGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCT 1294
E +IG+I P+ +Q + I + + V + T+D++QG ++ I+VSF + E P
Sbjct: 815 ERSEIGVIAPFRAQVSEISNHVP-DDVAVDTVDRFQGSSQEVIIVSFTATGTLEGP---- 869
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+ D+ RINVALTR K+ L++VG + L+ P+ + ++
Sbjct: 870 --IFEDYRRINVALTRPKRALVLVGDAQALASDPVYERML 907
Score = 45.1 bits (105), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 403 EERAVHLWEDWFHT--VIAPGDTVNVIGEFDDQGKCDVGRE---NNFLIVHPDVLVSGTR 457
E V LW W + ++ PG + V +++ + + +++++V P LVS T
Sbjct: 60 ETTTVTLWNKWTESAALLEPGMELLVTNAKEEEFRGETQYATTGDSYVVVEPSFLVSVTS 119
Query: 458 VAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQK 517
+ CPR L+ +L + + GTL+H++F ++ + LEE +++
Sbjct: 120 IRNWVECPRLYYLN-KLSGVPLNYPVVKGTLVHEVF-----GDLLRGRDLEESIDARIEE 173
Query: 518 NIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISEVT 577
L G + + + E + W+ + ++D N + ++L ISE
Sbjct: 174 RGLQLGLLGETPEAVVEDVRENAKAIEGWLEQGRLTEDDNWRS--------EQLLISET- 224
Query: 578 DIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVI 637
+G++G DA R P+E KTGK + + + Q
Sbjct: 225 ----------FGIRGRADAIRRGA-------------PVELKTGKNLKKEPRFKDKVQAA 261
Query: 638 LYTLLMSERYLKHIDSGLLYYLQS 661
Y LL+ E + +D+G L Y ++
Sbjct: 262 CYALLLEE-HGGDVDTGTLLYTKN 284
>gi|448306534|ref|ZP_21496438.1| DNA replication factor Dna2 [Natronorubrum bangense JCM 10635]
gi|445597832|gb|ELY51904.1| DNA replication factor Dna2 [Natronorubrum bangense JCM 10635]
Length = 939
Score = 201 bits (512), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 209/411 (50%), Gaps = 47/411 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 551 NAAQNEAVTKAVGARDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 610
Query: 1006 IKLKSQ----------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
L Q + VR+G + ++++ + L E+ L
Sbjct: 611 EALLEQLEDGVGSQTQRSGDGEGVSVVRVGSESGIREDMEPYRLE--RSGDPEDRVAELQ 668
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+VVA T + ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+
Sbjct: 669 NAQVVAATTATCGSRVMKEQAFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPV 728
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V++ EN + SLF RL + HP+A L QYRM Q I ++ Y L E+
Sbjct: 729 VRA----ENDLTESLFERLIDCHPEAGVMLDRQYRMNQRIQAFASREFYDGELRPAEPEV 784
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
A + +DL + ++AL P PV FV+ + D + EA IA +
Sbjct: 785 AGRTL--NDLEGVA---RDALPPALQDPVTFVDVE-------GDGGQYTDSEEAARIADL 832
Query: 1228 TQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRS 1286
++ +E +IG+I P+ +Q + L RH V + T+D++QG ++ I++SF +
Sbjct: 833 IEQYEAAGLERSEIGVIAPFRAQVSELSRH--VPDDVTVDTVDRFQGSSQEVIIISFTAT 890
Query: 1287 S--ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
E P + D+ RINVALTR K+ L++VG LS P+ ++
Sbjct: 891 GTLEGP------IFEDYRRINVALTRPKRALVLVGDPAALSSDPVYARMLE 935
>gi|448353256|ref|ZP_21542033.1| helicase [Natrialba hulunbeirensis JCM 10989]
gi|445640833|gb|ELY93919.1| helicase [Natrialba hulunbeirensis JCM 10989]
Length = 973
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/398 (33%), Positives = 204/398 (51%), Gaps = 31/398 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N+ Q A+ K + A D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 595 NEAQDEAVRKAVGAADCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 654
Query: 1006 IKLKSQ---SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q ID +R+G V +++Q + + L +VVA T
Sbjct: 655 EALLDQLEGVIDEERIIRVGSESGVREDMQPYRFD--RSGDPGDRAAALQNAQVVAATTA 712
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 713 TCGSRVMKEQAFDVALVDEAAQLTEPGTFAAVNLADRFVLVGDHEQLPPVVRA----END 768
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL E HP+A L QYRM Q I ++ Y +L E+A + DL
Sbjct: 769 LTESLFERLVELHPEAGVMLTQQYRMNQRIQAFASQEFYDGKLRPADGEVAGRTL--DDL 826
Query: 1180 SSCSPWLKEAL--NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
+ S +E L N V FV + D + EA IA + ++ ++
Sbjct: 827 TGVS---REDLPANIRDAVSFVAVE-------GDGSRYTDSTEAARIADLIEDYRAAGLD 876
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DIG+I P+ +Q + I + +V + T+D++QG ++ I+VSF + R +
Sbjct: 877 PSDIGVIAPFRAQVSEISRHVP-EAVAVDTVDRFQGSSQEVIIVSFTAT----RTLEGPI 931
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D+ RINVALTR K+ L++VG L P+ ++
Sbjct: 932 FDDYRRINVALTRPKRALVLVGDPNALETDPVYARMLE 969
>gi|448300390|ref|ZP_21490392.1| DNA replication factor Dna2 [Natronorubrum tibetense GA33]
gi|445586119|gb|ELY40405.1| DNA replication factor Dna2 [Natronorubrum tibetense GA33]
Length = 912
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 203/401 (50%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K ++A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 534 NAAQNEAVTKAVSAQDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 593
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q D VR+G V +++Q + L E+ L +VVA T
Sbjct: 594 EALLEQLDDVIDEDRVVRVGSESGVREDMQSYRLE--RSGDPEDRLAELQNAQVVAATTA 651
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FD ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 652 TCGSRVMKEQAFDAALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----END 707
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP A L QYRM Q I ++ Y L EIA + DL
Sbjct: 708 LTESLFERLVDLHPDAGVMLDRQYRMNQRIQAFASREFYDGELRPAEPEIAARTL--DDL 765
Query: 1180 SSCSPWLKEALNPCR-PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S E + R PV FV+ + D + EA IA + + I
Sbjct: 766 EGVS--RAELPDELRDPVAFVDVE-------GDGSQYTDGEEAARIADLVETYEAAGINR 816
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
DIG+I P+ +Q + I + V + T+D++QG ++ I+VSF T SL
Sbjct: 817 TDIGVIAPFRAQVSEITSHVP-DDVSVDTVDRFQGSSQEIIIVSF--------TATGSLE 867
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 868 GPIFEDYRRINVALTRPKRALVLVGDSGALATDPVYERMLE 908
>gi|110668823|ref|YP_658634.1| DNA2-like DNA replication helicase [Haloquadratum walsbyi DSM 16790]
gi|109626570|emb|CAJ53034.1| ATP-dependent DNA helicase Dna2 [Haloquadratum walsbyi DSM 16790]
Length = 940
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 215/438 (49%), Gaps = 59/438 (13%)
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
FS +YI S ND Q RA+ + + A+D+ALI G PGTGKT T+ + L+ RG
Sbjct: 524 FSNRADETYIPS----NDAQNRAVKRAVNAEDFALIHGPPGTGKTYTIAQLLSVLVARGD 579
Query: 990 SILLTSYTNSAVDNLLIKLKSQSID-----FVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
+LL+++TN AVDN L ++ +D VR+G + + +Q L + S
Sbjct: 580 RVLLSAFTNRAVDNALTAVRDPDVDVSDESIVRVGTNAGIDDSMQDIKLD--DTGSPAAC 637
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
+ VVA T + ++ ++ FDV ++DEA Q T P +L + A + VLVGDH
Sbjct: 638 ATAVQSASVVAATTATCGSRVMREQSFDVAVIDEASQLTEPNTLAAVALADRVVLVGDHQ 697
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPP+V++ + ++ SLF RL E HP+A L QYRM Q I S+ Y L
Sbjct: 698 QLPPVVRA----DTDLQTSLFERLIETHPEASVLLDRQYRMAQRIQAFSSQKFYDGELRP 753
Query: 1165 GSDEIANAK-IKVSDLSSCSPWL----------KEALNPCR---------------PVIF 1198
+ +A + + D + P ++ L+ + PV+F
Sbjct: 754 ATRTVATQRPADLLDETPTGPATDGGDGYRQQKQQRLDAHQDDQTQTHTLPAHLRDPVVF 813
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
++ D +D T N EA IA I + I+ DIG+I P+ +Q I
Sbjct: 814 IDPDG-----TRDGNT--NLTEADRIADIVTTYINAGIDPSDIGVIAPFRAQVAAISQRT 866
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
SV+ + T+D++QG K+ I++SFV ++ E P + D R+NVA+TRA+K L+
Sbjct: 867 SVT---VDTVDRFQGSAKEIIIISFVATNSLEEP------IFEDTRRVNVAITRARKGLV 917
Query: 1317 MVGSCRTLSKVPLLKLLI 1334
+VG LS P L+
Sbjct: 918 LVGDTAALSSDPFYATLL 935
>gi|448460383|ref|ZP_21597208.1| DNA replication factor Dna2 [Halorubrum lipolyticum DSM 21995]
gi|445807124|gb|EMA57210.1| DNA replication factor Dna2 [Halorubrum lipolyticum DSM 21995]
Length = 910
Score = 201 bits (510), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/406 (34%), Positives = 211/406 (51%), Gaps = 29/406 (7%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
DP+ +YI ND Q A+ + A+D ALI G PGTGKT T+ A++AL+ G
Sbjct: 529 GDDPSDAYI----DNNDAQNEAVQLAVDAEDCALIHGPPGTGKTYTIARAIRALVAGGNR 584
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLD 1049
+LL+++TN AVDN L L+ Q D V R+G V ++Q L + + + R
Sbjct: 585 VLLSAFTNRAVDNALEALRDQGFDDVLRVGTETGVRGDMQDVRLVQRGDPNAKAAELRDA 644
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
V G + +L + +FDV ++DEA Q T P + + A +FVLVGDH QLPP+
Sbjct: 645 PVVAATTAACG--SRVLRECEFDVALVDEASQLTEPGTHAAINRADRFVLVGDHEQLPPV 702
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
V++ EN + +SLF+RL E++P A L QYRM Q I ++A Y L + E+
Sbjct: 703 VRA----ENDLRMSLFQRLIEKYPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEV 758
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
A ++ DL L + L V FV+ D +D N EA +A+I
Sbjct: 759 AGQTLR--DLGVDPAALPDGL--AGGVSFVDPDG-----TRDGN--RNVREAERVAEIVD 807
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V ++ DIG+I P+ +Q I SV+ + T+D++QG K+ I+VS V +
Sbjct: 808 AYVAAGVDPDDIGVIAPFRAQVAEIGRRTSVT---VDTVDRFQGSSKEVIVVSLVATG-- 862
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ + D R+NVALTRAKK+L +VG L+ P + L++
Sbjct: 863 --DLDGPIFEDHRRMNVALTRAKKQLTLVGDADALASEPFYERLLD 906
>gi|281208251|gb|EFA82429.1| hypothetical protein PPL_04854 [Polysphondylium pallidum PN500]
Length = 799
Score = 200 bits (509), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 265/548 (48%), Gaps = 86/548 (15%)
Query: 827 GDYVILSTESDRL--AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEV--WR 882
GD VI+S + V G++ E+S + VS P + D S+ WR
Sbjct: 237 GDPVIISRHNPLYDDVVFEGILLEVSGSAIKVSIKLPPQQQQLQQQKDNTSIFRNTKPWR 296
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
+D + + Q +++ P DS + S P ++E
Sbjct: 297 LDYGKTI--------------------EQACSQYINVFKPNSDSDADVSIPPD----FNE 332
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL--------------LMRG 988
+N QR AI+ + + +LI G PGTGK++T ++ V+ L +
Sbjct: 333 WRMNSSQRNAILSSVKRR-VSLIQGPPGTGKSATAINLVRLLCHIKEKLSANDPGGVAAS 391
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIG-----RHEVVHKEIQKHCLSAM------- 1036
IL+TSYTN+ VDNLL L ++ +R+G R ++++ + H A+
Sbjct: 392 QKILVTSYTNTGVDNLLDGLLKYNVKVLRLGHTSSVRPDLLNATLDHHLSEAIKQYEKSP 451
Query: 1037 -----NINSVEEIKKR--LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
NI ++E K L QV V+ TC+ +P+LT+++F + I+DEA Q T P L
Sbjct: 452 NYNPANIANIERDTKSKLLSQVNVICTTCIASGHPILTNERFSIVIVDEASQATEPAILV 511
Query: 1090 PLMFAS-KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PL+ S + L GD QL P + + EA + G+ I LF+RL+ + + L+ QYRM
Sbjct: 512 PLLKQSEQLFLFGDQNQLSPTIFTKEAEDGGLSIGLFQRLANDITPFL--LEEQYRMHSK 569
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
++E N IY +L G D+ K + W +E C P+ FVN ++ +
Sbjct: 570 LLEFPNKYIYDGKLKTGIDD------KDRQIPRGFDWPREQ---C-PIAFVN--VVGKED 617
Query: 1209 AKDHQTLNNPVEACLIAKITQELVK--NEIEGKDIGIITPYNSQANLIRHSLSVSSVE-- 1264
++ +N P EA I +I + +VK ++ GIITPY+SQA LI + L +
Sbjct: 618 INNYSYMNMP-EAKEIVRILKAMVKENQDLTTDSFGIITPYSSQAKLICNLLRPDFRKLP 676
Query: 1265 -IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
+ T+D +QGR+K+ ILVS VRS+ R L DW R+NV+LTRAK+ +I+VG+ +T
Sbjct: 677 TVATVDSFQGREKEIILVSTVRSNLGGR---VGFLNDWRRLNVSLTRAKRGMIIVGNKQT 733
Query: 1324 LSKVPLLK 1331
L P K
Sbjct: 734 LESCPCEK 741
>gi|403301188|ref|XP_003941279.1| PREDICTED: DNA-binding protein SMUBP-2 [Saimiri boliviensis
boliviensis]
Length = 969
Score = 200 bits (509), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 277/546 (50%), Gaps = 55/546 (10%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ +R L L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYKRLRKALTALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--CLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNVAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIV 293
Query: 1042 EEIKKRLDQVKV-----VAVTCLGITNP--LLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
+I+K +DQV V V V C P LL + F + ++DE Q PL+ A
Sbjct: 294 ADIRKDIDQVFVGVVASVHVGCASGDGPLKLLPEGHFGMVVIDECAQALEASCWIPLLQA 353
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ-AISALQSQYRMCQGIMELS 1153
K +L GDH QLPP V S A G+ +SL RL++E+ + + L QYRM Q IM +
Sbjct: 354 GKCILAGDHKQLPPTVISHRAALAGLSLSLMERLADEYGERVVRTLTVQYRMHQAIMRWA 413
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKD 1211
+ +Y +L+ +A ++ DL P + P++ V+T + E +D
Sbjct: 414 SEAMYLRQLT-AHPSVAGHLLR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEED 466
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTID 1269
Q+ NP E L++ Q LV + +DI +++PYN Q +L+R SL+ +EI ++D
Sbjct: 467 EQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLAHRYPELEIKSVD 526
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
+QGR+K+ +++SFVRS+ R L + RINVA+TRA++ + ++ RT++
Sbjct: 527 GFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAF 583
Query: 1330 LKLLIN 1335
LK L+
Sbjct: 584 LKTLVE 589
>gi|448622876|ref|ZP_21669525.1| ATP-dependent DNA helicase Dna2 [Haloferax denitrificans ATCC 35960]
gi|445753384|gb|EMA04801.1| ATP-dependent DNA helicase Dna2 [Haloferax denitrificans ATCC 35960]
Length = 884
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 201/391 (51%), Gaps = 27/391 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALRDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NPVEA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPVEADRVAEVVAAYEAAGVDTDDIGVI 796
Query: 1245 TPYNSQ-ANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
P+ +Q A + R + ++ + T+D++QG K+ I+VSFV + E L D R
Sbjct: 797 APFRAQVAEISRRTDAI----VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRR 848
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
INVALTRAKK L +VG L P ++
Sbjct: 849 INVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|385804339|ref|YP_005840739.1| helicase [Haloquadratum walsbyi C23]
gi|339729831|emb|CCC41114.1| ATP-dependent DNA helicase Dna2 [Haloquadratum walsbyi C23]
Length = 940
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 215/439 (48%), Gaps = 59/439 (13%)
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
FS +YI S ND Q RA+ + + A+D+ALI G PGTGKT T+ + L+ RG
Sbjct: 523 TFSNRADETYIPS----NDAQNRAVKRAVNAEDFALIHGPPGTGKTYTIAQLLSVLVARG 578
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSID-----FVRIGRHEVVHKEIQKHCLSAMNINSVEE 1043
+LL+++TN AVDN L ++ +D VR+G + + +Q L + S
Sbjct: 579 DRVLLSAFTNRAVDNALTAVRDPDVDVSDESIVRVGTNAGIDDSMQDVKLD--DTGSPAA 636
Query: 1044 IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDH 1103
L VVA T + ++ ++ FD+ ++DEA Q T P +L + A + VLVGDH
Sbjct: 637 CATALQSASVVAATTATCGSRVMREQSFDIAVIDEASQLTEPNTLAAVALADRVVLVGDH 696
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLS 1163
QLPP+V++ + ++ SLF RL + HP+A L QYRM Q I S+ Y L
Sbjct: 697 QQLPPVVRA----DTDLQTSLFERLIDTHPEASVLLDRQYRMAQRIQAFSSQKFYDGELR 752
Query: 1164 CGSDEIANAK-IKVSDLSSCSPWL----------KEALNPCR---------------PVI 1197
+ +A + + D + P ++ L+ + PV+
Sbjct: 753 PATRTVATQRPTDLLDETPTGPATDGGDSYRQQKQQRLDAHQNDQTETHTLPAHLRDPVV 812
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
F++ D +D T N EA IA I + ++ DIG+I P+ +Q I
Sbjct: 813 FIDPDG-----TRDGNT--NLTEADRIADIVTTYIDAGVDPSDIGVIAPFRAQVAAISQR 865
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVALTRAKKKL 1315
SV+ + T+D++QG K+ I++SFV ++ E P + D R+NVA+TRA+K L
Sbjct: 866 TSVT---VDTVDRFQGSAKEIIIISFVATNSLEEP------IFEDTRRVNVAITRARKGL 916
Query: 1316 IMVGSCRTLSKVPLLKLLI 1334
++VG LS P L+
Sbjct: 917 VLVGDTAALSSDPFYATLL 935
>gi|448546345|ref|ZP_21626509.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-646]
gi|448548332|ref|ZP_21627599.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-645]
gi|448557526|ref|ZP_21632715.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-644]
gi|445702798|gb|ELZ54738.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-646]
gi|445714083|gb|ELZ65850.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-644]
gi|445714427|gb|ELZ66189.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. ATCC BAA-645]
Length = 884
Score = 200 bits (508), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 196/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVGDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + L VVA T +
Sbjct: 574 EALRDQGFDDIVRVGTESGVREDMQDVRLS--RSGDPNALAAALRDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NPVEA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--AGQVAFVDPDGRCVGN-------TNPVEADRVAEVVAAYEAAGVDADDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + E L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|448583272|ref|ZP_21646628.1| ATP-dependent DNA helicase Dna2 [Haloferax gibbonsii ATCC 33959]
gi|445729501|gb|ELZ81096.1| ATP-dependent DNA helicase Dna2 [Haloferax gibbonsii ATCC 33959]
Length = 884
Score = 199 bits (507), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 199/390 (51%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALHDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQKSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A+ ++ DL+ +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVASQHLR--DLAVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NP+EA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPIEADRVAEVVAAYEAAGVDADDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + + L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATG----DLDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|448717221|ref|ZP_21702676.1| DNA replication factor Dna2 [Halobiforma nitratireducens JCM 10879]
gi|445786025|gb|EMA36801.1| DNA replication factor Dna2 [Halobiforma nitratireducens JCM 10879]
Length = 968
Score = 199 bits (507), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/399 (34%), Positives = 202/399 (50%), Gaps = 33/399 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D+ LI G PGTGKT T+ AV+A++ RG +LL+++TN AVDN+L
Sbjct: 590 NDAQNEAVRMAIGADDFTLIHGPPGTGKTYTIARAVRAMVERGERVLLSAFTNRAVDNVL 649
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q D VR+G V ++++ + L ++ L +VVA T
Sbjct: 650 EALLEQLDDVIDEDRIVRVGSESGVREDMEPYRLE--RAGDPDDRLAELQNAQVVAATTA 707
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + A +FVLVGDH QLPP+V++ EN
Sbjct: 708 TCGSRVMKEQSFDVALVDEAAQLTEPGTHAATNLADRFVLVGDHEQLPPVVRA----END 763
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + +P+A L QYRM Q I ++ Y +L E A A V DL
Sbjct: 764 LTESLFERLVDRYPEAGVMLDRQYRMNQRIQAFASREFYDGQLRPA--EPAVAARTVDDL 821
Query: 1180 SSCS-PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
S L E L PV FV D D + EA IA++ +E
Sbjct: 822 EGVSRDSLPEGLRD--PVSFVPVD-------GDDGRYTDSEEATRIAELVDAYEAAGLER 872
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS--ENPRNCTSS 1296
+IG+I P+ +Q + I + SV + T+D++QG ++ I+VSF + E P
Sbjct: 873 TEIGVIAPFRAQVSEISKRVP-ESVAVDTVDRFQGSSQEVIIVSFTATGRLEGP------ 925
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ D+ RINVALTR K+ L +VG L P+ ++
Sbjct: 926 IFEDYRRINVALTRPKRALTLVGDPSALESDPVYDRMLE 964
>gi|440894224|gb|ELR46730.1| DNA-binding protein SMUBP-2 [Bos grunniens mutus]
Length = 981
Score = 199 bits (507), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 275/577 (47%), Gaps = 87/577 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--VWRI 883
SGD V L ES +LA +G++T I++ V+V+F + S D+ L + +R+
Sbjct: 85 SGDIVGLYDESGQLA--TGILTRITQKAVTVAF---------DESHDSQLSLDQEHSYRL 133
Query: 884 DKDEIMTSFSVMRYNLVQLFLQSAQ-SSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
K ++ ++ L+ L A +S L ++ P S S+ P L++
Sbjct: 134 LKLANDVTYKRLKKALISLKKHHAGPASSLIEVLFGASDP-----SPPSETPPLTFC--N 186
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + RG+ +L + +N AVD
Sbjct: 187 PALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVD 246
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV------ 1051
NL+ +L +R+G + IQ+H L A+ S V +I++ +DQ
Sbjct: 247 NLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRRDIDQAWAKNRK 306
Query: 1052 ------------------------------------KVVAVTCLGITN----PLLTDKKF 1071
VV T G + LL D F
Sbjct: 307 TQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAANVVLATNTGASADGPLKLLPDSHF 366
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D+ ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL+E
Sbjct: 367 DMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAER 426
Query: 1132 H-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
H A+ L QYRM Q I ++ +Y +L+ +A ++ DL P +
Sbjct: 427 HGAGALRMLTVQYRMHQAIARWASEALYHGQLTA-HPSVAGHLLR--DL----PGVAATE 479
Query: 1191 NPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P++ V+T L E D Q+ NP E L++ Q LV + DI +ITPYN
Sbjct: 480 ETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVSLHVQALVDAGVRAADIAVITPYN 539
Query: 1249 SQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q +L+R SL+ + +EI ++D +QGR+K+ +++SFVRS+ R L + RINV
Sbjct: 540 LQVDLLRQSLAHRLPELEIRSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINV 596
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
A+TRA++ + +V RT+S LK L+ + E +
Sbjct: 597 AVTRARRHVAVVCDSRTVSNHAFLKTLVGYLTEHGEV 633
>gi|426252598|ref|XP_004019993.1| PREDICTED: DNA-binding protein SMUBP-2 [Ovis aries]
Length = 874
Score = 199 bits (506), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 170/577 (29%), Positives = 275/577 (47%), Gaps = 87/577 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--VWRI 883
SGD V L ES +LA +G++T I++ V+V+F + S D+ L + +R+
Sbjct: 74 SGDIVGLYDESGQLA--TGILTRITQKAVTVAF---------DESHDSQLSLDQEHSYRL 122
Query: 884 DKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
K ++ ++ L+ L S +S L ++ P S S+ P L++
Sbjct: 123 LKLANDVTYKRLKKALISLKKYHSGPASSLIEVLFGTADP-----SPPSEMPPLTFC--N 175
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + RG+ +L + +N AVD
Sbjct: 176 PALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVD 235
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV------ 1051
NL+ +L +R+G + IQ+H L A+ S V +I++ +DQ
Sbjct: 236 NLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDGARIVADIRRDIDQAWAKNRK 295
Query: 1052 -------------------------------KVVAVTCLGITN---------PLLTDKKF 1071
+ A + + TN LL D F
Sbjct: 296 TQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAASVILATNTGASADGPLKLLPDGHF 355
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
DV ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL+E
Sbjct: 356 DVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAER 415
Query: 1132 H-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
H A+ L QYRM Q I ++ +Y +L+ +A ++ DL P +
Sbjct: 416 HGAGAVRMLTVQYRMHQAIARWASEALYHGQLTA-HPSVAGHLLR--DL----PGVAATE 468
Query: 1191 NPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P++ V+T L E D Q+ NP E L+ Q LV + DI +ITPYN
Sbjct: 469 ETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVITPYN 528
Query: 1249 SQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q +L+R +L+ +EI ++D +QGR+K+ +++SFVRS+ R L + RINV
Sbjct: 529 LQVDLLRQNLAHRHPELEIRSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINV 585
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
A+TRA++ + +V RT+S LK L++ + E +
Sbjct: 586 AVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEV 622
>gi|433432523|ref|ZP_20407773.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. BAB2207]
gi|432193527|gb|ELK50247.1| ATP-dependent DNA helicase Dna2 [Haloferax sp. BAB2207]
Length = 884
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 196/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFDDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALRDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NP EA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPTEADRVAEVVAAYEAAGVDADDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + E L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|301787841|ref|XP_002929345.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Ailuropoda melanoleuca]
Length = 995
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 170/580 (29%), Positives = 278/580 (47%), Gaps = 87/580 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HEV 880
+ SGD V L E +LA +G++T I++ V+V+F + S D L +
Sbjct: 82 SFTSGDIVGLYDEGSQLA--TGILTRITQRSVTVAF---------DESHDFQLSLDREQS 130
Query: 881 WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+ K ++ ++ LV L S +S L ++ AP S + Q P +
Sbjct: 131 YRLLKLANDVTYKRLKKALVTLKKYHSGPASSLIEVLFGGSAP---SPASEIQPP----L 183
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 184 FCNASLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAPSNI 243
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV--- 1051
AVDNL+ +L +R+G + + IQ+H L A+ N V +I+K +DQ
Sbjct: 244 AVDNLVERLARCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQAFAK 303
Query: 1052 ---------------------------------------KVVAVTCLGITN----PLLTD 1068
VV T G ++ LL D
Sbjct: 304 NRQTQDKREKSSVWSEIKLLRKELKEREEAAMLESLTSAAVVLATNTGASSDGPLKLLPD 363
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL RL
Sbjct: 364 SHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERL 423
Query: 1129 SEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+EEH + + L QYRM + IM+ ++ +Y +L+ +A ++ DL + +
Sbjct: 424 AEEHGARVVRTLTVQYRMHRAIMQWASDALYHGQLTA-HPSVAGHLLR--DLPGVAATEE 480
Query: 1188 EALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T + E +D Q+ NP E L++ Q LV ++ DI +IT
Sbjct: 481 TGI----PLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHIQALVDAGVQASDIAVIT 536
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 537 PYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 593
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT++ LK L++ E +
Sbjct: 594 INVAVTRARRHVAVVCDSRTVNNHAFLKTLVDHFTEHGEV 633
>gi|429192023|ref|YP_007177701.1| DNA/RNA helicase [Natronobacterium gregoryi SP2]
gi|448324733|ref|ZP_21514145.1| DNA replication factor Dna2 [Natronobacterium gregoryi SP2]
gi|429136241|gb|AFZ73252.1| DNA/RNA helicase, superfamily I [Natronobacterium gregoryi SP2]
gi|445617696|gb|ELY71289.1| DNA replication factor Dna2 [Natronobacterium gregoryi SP2]
Length = 891
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 212/401 (52%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+AL+ G PGTGKT T+ AV+A++ RG +LL+++TN AVDN+L
Sbjct: 513 NDAQNEAVRMAVGAEDFALVHGPPGTGKTYTIARAVRAMVERGERVLLSAFTNRAVDNVL 572
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q D VR+G V +++Q + L + + K L +VVA T
Sbjct: 573 EALLEQLADIVDPDRIVRVGSESGVREDMQPYRLERSG-EPADRVGK-LQAAQVVAATTA 630
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 631 TCGSRVMKEQSFDVALVDEAAQLTEPGTYAAVNLADRFVLVGDHEQLPPVVRA----END 686
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP+A L QYRM Q I ++ Y RL E+A+ ++ DL
Sbjct: 687 LTESLFERLVDRHPEAGVMLDRQYRMNQRIQAFASQEFYDGRLRPAEPEVASRTLE--DL 744
Query: 1180 SSCSPW-LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
+ + L E L PV F + D + EA IA++ + + +E
Sbjct: 745 AGVARTDLPEHLQD--PVSFAPVE-------GDGSQYTDSEEAARIAELVEAYEEAGLER 795
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
DIGII P+ +Q + I + + +V + T+D++QG ++ I+VSF T SL
Sbjct: 796 TDIGIIAPFRAQVSEISNHVP-DAVTVDTVDRFQGSSQEVIVVSF--------TATGSLE 846
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D RINVALTR K+ L++VG L P+ + ++
Sbjct: 847 GPIFEDHRRINVALTRPKRGLVLVGDPAALESDPVYRRMLE 887
>gi|409721325|ref|ZP_11269526.1| DNA replication factor Dna2 [Halococcus hamelinensis 100A6]
Length = 911
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 200/407 (49%), Gaps = 46/407 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + A D AL+ G PGTGKT T+ ++AL+ RG +LL+ +TN AVDN L
Sbjct: 511 NPAQNRAVRLAVGADDCALVHGPPGTGKTYTIARTIQALVERGERVLLSGFTNRAVDNAL 570
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q + FVR+G V ++Q L E + L+ VVA T +
Sbjct: 571 EALREQGFEEFVRVGTEHGVRADMQGFRLETRG--DPEARARELEDAPVVAATTASCGSR 628
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEI- 1122
++ ++ FDV ++DEAGQ T P +L + A +FVLVGDH QLPP+VQ+ +A E+ +EI
Sbjct: 629 VMREESFDVALVDEAGQLTEPATLAAVTLADRFVLVGDHQQLPPVVQAADAADESDIEIE 688
Query: 1123 -----------------------SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
SLF RL + HP A L +QYRM Q I ++ Y
Sbjct: 689 STTDPASARSDGGVATDAADLSRSLFERLVDAHPDASVLLDTQYRMAQRIQAFPSSEFYD 748
Query: 1160 DRLSCGSDEIANAKIKVSDLSSC-SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
L S ++A + +DL L E L V FV+ D + NP
Sbjct: 749 GALRPASPDVATQHL--TDLPGVDDDALPEHLRDR--VAFVDPDGT-------ARGNTNP 797
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
E + + V + D+G+I P+ +QA V V + T+D++QG K+
Sbjct: 798 TEVERVGETVDAFVAAGLAPDDVGVIAPFRAQAAA--IRRRVPDVTVDTVDRFQGSAKEV 855
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
I+VSFV + S + D R+NVALTRAKK L++VG L+
Sbjct: 856 IVVSFVATG----TLDSPVFEDPRRVNVALTRAKKALVLVGDREALT 898
>gi|336253852|ref|YP_004596959.1| DNA replication factor Dna2 [Halopiger xanaduensis SH-6]
gi|335337841|gb|AEH37080.1| DNA replication factor Dna2 [Halopiger xanaduensis SH-6]
Length = 918
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/401 (34%), Positives = 206/401 (51%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + AKD ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 540 NARQNEAVTKAVGAKDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 599
Query: 1006 IKLKSQ---SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q ID VR+G V +++ + L E+ L +VVA T
Sbjct: 600 EALLEQLEGVIDEDRIVRVGSESGVRDDMEPYRLE--RAGDPEDRLAELQNAQVVAATTA 657
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FD ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 658 TCGSRIMKEQSFDAALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----END 713
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP+A L QYRM Q I ++ Y +L E A A ++DL
Sbjct: 714 LSESLFERLVDLHPEAGVMLDRQYRMNQRIQAFASREFYDGKLRPA--EPAVAARTLNDL 771
Query: 1180 SSCSPW-LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
+ L E L PV FV+ + D + EA IA++ + +E
Sbjct: 772 EGVARADLPENLRD--PVSFVDVE-------GDGSRYTDGEEAARIAELIEAYEAAGLER 822
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+IG+I P+ +Q + I + V + T+D++QG ++ I+VSF T SL
Sbjct: 823 SEIGVIAPFRAQVSEISAHVP-DDVAVDTVDRFQGSSQEVIIVSF--------TATGSLE 873
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D+ RINVALTR K+ L++VG L+ P+ ++
Sbjct: 874 GPIFEDYRRINVALTRPKRALVLVGDSNALATDPVYGRMLE 914
>gi|448602305|ref|ZP_21656361.1| ATP-dependent DNA helicase Dna2 [Haloferax sulfurifontis ATCC
BAA-897]
gi|445747820|gb|ELZ99274.1| ATP-dependent DNA helicase Dna2 [Haloferax sulfurifontis ATCC
BAA-897]
Length = 884
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 136/390 (34%), Positives = 197/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALHDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQQSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NPVEA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVSFVDPDGRRVGN-------TNPVEADRVAEVVAAYEAAGVDTDDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + E L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|448721676|ref|ZP_21704219.1| DNA replication factor Dna2 [Halococcus hamelinensis 100A6]
gi|445790748|gb|EMA41398.1| DNA replication factor Dna2 [Halococcus hamelinensis 100A6]
Length = 900
Score = 199 bits (505), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 200/407 (49%), Gaps = 46/407 (11%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q RA+ + A D AL+ G PGTGKT T+ ++AL+ RG +LL+ +TN AVDN L
Sbjct: 500 NPAQNRAVRLAVGADDCALVHGPPGTGKTYTIARTIQALVERGERVLLSGFTNRAVDNAL 559
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q + FVR+G V ++Q L E + L+ VVA T +
Sbjct: 560 EALREQGFEEFVRVGTEHGVRADMQGFRLETRG--DPEARARELEDAPVVAATTASCGSR 617
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEI- 1122
++ ++ FDV ++DEAGQ T P +L + A +FVLVGDH QLPP+VQ+ +A E+ +EI
Sbjct: 618 VMREESFDVALVDEAGQLTEPATLAAVTLADRFVLVGDHQQLPPVVQAADAADESDIEIE 677
Query: 1123 -----------------------SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYG 1159
SLF RL + HP A L +QYRM Q I ++ Y
Sbjct: 678 STTDPASARSDGGVATDAADLSRSLFERLVDAHPDASVLLDTQYRMAQRIQAFPSSEFYD 737
Query: 1160 DRLSCGSDEIANAKIKVSDLSSC-SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
L S ++A + +DL L E L V FV+ D + NP
Sbjct: 738 GALRPASPDVATQHL--TDLPGVDDDALPEHLRDR--VAFVDPDGT-------ARGNTNP 786
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
E + + V + D+G+I P+ +QA V V + T+D++QG K+
Sbjct: 787 TEVERVGETVDAFVAAGLAPDDVGVIAPFRAQAAA--IRRRVPDVTVDTVDRFQGSAKEV 844
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
I+VSFV + S + D R+NVALTRAKK L++VG L+
Sbjct: 845 IVVSFVATG----TLDSPVFEDPRRVNVALTRAKKALVLVGDREALT 887
>gi|383621633|ref|ZP_09948039.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
gi|448702263|ref|ZP_21699917.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
gi|445777633|gb|EMA28594.1| DNA replication factor Dna2 [Halobiforma lacisalsi AJ5]
Length = 942
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 135/401 (33%), Positives = 204/401 (50%), Gaps = 37/401 (9%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D ALI G PGTGKT T+ AV+A++ RG +LL+++TN AVDN+L
Sbjct: 564 NDAQNEAVRMAVGAEDVALIHGPPGTGKTYTIARAVRAMVERGERVLLSAFTNRAVDNVL 623
Query: 1006 IKLKSQSID------FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L D VR+G V ++++ + L E+ L +VVA T
Sbjct: 624 EALLEGLEDVIDEDRIVRVGSESGVREDMEPYRLE--RAGDPEDRLAELQNAQVVAATTA 681
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 682 TCGSRVMKEQSFDVALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRA----END 737
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI-KVSD 1178
+ SLF RL + HP+A L QYRM Q I ++ Y +L E+A + + D
Sbjct: 738 LTESLFERLVDLHPEAGVMLDRQYRMNQRIQAFASQEFYDGKLRPAEPEVAARTLDDLED 797
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
++ L E L PV FV + D + EA IA + +E
Sbjct: 798 VARAD--LPENLQD--PVSFVGVE-------GDGGRYTDGEEAARIADLIDAYEAAGLER 846
Query: 1239 KDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+IG+I P+ +Q + I + V + T+D++QG ++ I+VSF T SL
Sbjct: 847 SEIGVIAPFRAQVSEISKRVP-DDVAVDTVDRFQGSSQEVIVVSF--------TATGSLE 897
Query: 1299 G----DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
G D+ RINVALTR K+ L++VG L P+ + ++
Sbjct: 898 GPIFEDYRRINVALTRPKRALVLVGDPAALETDPVYERMLE 938
>gi|358419774|ref|XP_003584325.1| PREDICTED: DNA-binding protein SMUBP-2 [Bos taurus]
gi|359081357|ref|XP_003588118.1| PREDICTED: DNA-binding protein SMUBP-2 [Bos taurus]
Length = 981
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 275/577 (47%), Gaps = 87/577 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE--VWRI 883
SGD V L ES +LA +G++T I++ V+V+F + S D+ L + +R+
Sbjct: 85 SGDIVGLYDESGQLA--TGILTRITQKAVTVAF---------DESHDSQLSLDQEHSYRL 133
Query: 884 DKDEIMTSFSVMRYNLVQLFLQSAQ-SSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
K ++ ++ L+ L A +S L ++ P S S+ P L++
Sbjct: 134 LKLANDVTYKRLKKALISLKKHHAGPASSLIEVLFGASDP-----SPPSEMPPLTFC--N 186
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + RG+ +L + +N AVD
Sbjct: 187 PALDASQQEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKRGSKVLCCAPSNVAVD 246
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV------ 1051
NL+ +L +R+G + IQ+H L A+ S V +I++ +DQ
Sbjct: 247 NLVERLAQWKQRILRLGHPARLLDSIQQHSLDAVLARSDSARIVADIRRDIDQAWAKNRK 306
Query: 1052 ------------------------------------KVVAVTCLGITN----PLLTDKKF 1071
VV T G + LL D F
Sbjct: 307 TQDKREKSNFRDEIKLLRKELKDREEAAMLESLAAASVVLATNTGASADGPLKLLPDSHF 366
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D+ ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL+E
Sbjct: 367 DMVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSLSLMERLAER 426
Query: 1132 H-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
H A+ L QYRM Q I ++ +Y +L+ +A ++ DL P +
Sbjct: 427 HGAGALRMLTVQYRMHQAIARWASEALYHGQLTA-HPSVAGHLLR--DL----PGVAATE 479
Query: 1191 NPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P++ V+T L E D Q+ NP E L+ Q LV + DI +ITPYN
Sbjct: 480 ETGVPLLLVDTAGCGLLELEEDDEQSKGNPGEVRLVGLHVQALVDAGVRAADIAVITPYN 539
Query: 1249 SQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q +L+R SL+ + +EI ++D +QGR+K+ +++SFVRS+ R L + RINV
Sbjct: 540 LQVDLLRQSLAHRLPELEIRSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINV 596
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
A+TRA++ + +V RT+S LK L++ + E +
Sbjct: 597 AVTRARRHVAVVCDSRTVSNHAFLKTLVDYLTEHGEV 633
>gi|449131912|ref|ZP_21768086.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
gi|448888721|gb|EMB19023.1| DNA-binding protein SMUBP-2 [Rhodopirellula europaea 6C]
Length = 734
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 231/481 (48%), Gaps = 74/481 (15%)
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQ--DPA-----LSYIWSEKSLNDDQRRAIIKVLTA 959
+S +LR +++ ++ PR D + + DP L+ I LN QR A+ + A
Sbjct: 237 GRSGKLRDVLLGIKTPRVDGNPIDTHEIDPESFQFELNDIDFRTELNPPQRDAVAFAMMA 296
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
D A+I G PGTGKT+T+ + + RG +L + +N+AVDNLL +L + VR+G
Sbjct: 297 DDVAIIHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVG 356
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
V + +Q+H L A+ ++++++ LDQ+
Sbjct: 357 HPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIRAGGGRERKQRSELF 416
Query: 1052 ------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
V T I LL+D+ FD+ ++DE+ Q T P
Sbjct: 417 NEAGRLRGMIRSQERGIVRSVIDRADVICTTTTIDEELLSDQSFDLVVVDESCQCTEPGM 476
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMC 1146
++ A + +L GDH QLPP V S +A + GM SL +RL + + I L QYRM
Sbjct: 477 WQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDSLMQRLVHRYGERIYRRLTVQYRMN 536
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IM S+ Y L IA+A +K L P ++E P++ ++T
Sbjct: 537 ESIMRFSSDHFYDSTL------IADASVKRHRLCDL-PNVEENDFTTEPLLLIDT-AGAG 588
Query: 1207 YEAK---DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV 1263
YE + D Q+ N EA +I ++ ++L + G I +I PY +Q +R L + +
Sbjct: 589 YEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQVRNLRMRLDLDGI 648
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI T+D +QGR+K+ +L++ RS NP + L D R NVALTRAK+KLI+VG T
Sbjct: 649 EIDTVDGFQGREKEVVLITMTRS--NP-DGEIGFLSDQRRSNVALTRAKRKLIVVGDSAT 705
Query: 1324 L 1324
L
Sbjct: 706 L 706
>gi|448565322|ref|ZP_21636189.1| ATP-dependent DNA helicase Dna2 [Haloferax prahovense DSM 18310]
gi|445715066|gb|ELZ66822.1| ATP-dependent DNA helicase Dna2 [Haloferax prahovense DSM 18310]
Length = 884
Score = 198 bits (504), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 198/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFEDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALHDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQKSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A+ ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVASQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NP+EA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPIEADRVAEVVAAYEAAGVDTDDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + + L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATG----DLDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|421612070|ref|ZP_16053189.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
gi|408497130|gb|EKK01670.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH28]
Length = 734
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 230/481 (47%), Gaps = 74/481 (15%)
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQDP-------ALSYIWSEKSLNDDQRRAIIKVLTA 959
+S +LR +++ ++ PR D + + D L+ I LN QR A+ + A
Sbjct: 237 GRSGKLRDVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMA 296
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
D A+I G PGTGKT+T+ + + RG +L + +N+AVDNLL +L + VR+G
Sbjct: 297 DDVAIIHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVG 356
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
V + +Q+H L A+ ++++++ LDQ+
Sbjct: 357 HPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIRAGGGRERKQRSELF 416
Query: 1052 ------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
V T I LL+D+ FD+ ++DE+ Q T P
Sbjct: 417 NEAGRLRGMIRSQERGIVRSVIDRADVICTTTTIDEELLSDQSFDLVVVDESCQCTEPGM 476
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMC 1146
++ A + +L GDH QLPP V S +A + GM SL +RL + + I L QYRM
Sbjct: 477 WQAILRADRLILAGDHCQLPPTVLSDDAAKIGMRDSLMQRLVHRYGERIYRRLTVQYRMN 536
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IM S+ Y L IA+A +K L P ++E P++ ++T
Sbjct: 537 ESIMRFSSDHFYDSTL------IADASVKRHRLCDL-PNVEENDFTTEPLLLIDT-AGAG 588
Query: 1207 YEAK---DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV 1263
YE + D Q+ N EA +I ++ ++L + G I +I PY +Q +R L + +
Sbjct: 589 YEEELEPDGQSKLNYGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQVRNLRMRLDLDGI 648
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI T+D +QGR+K+ +L++ RS NP + L D R NVALTRAK+KLI+VG T
Sbjct: 649 EIDTVDGFQGREKEVVLITMTRS--NP-DGEIGFLSDQRRSNVALTRAKRKLIVVGDSAT 705
Query: 1324 L 1324
L
Sbjct: 706 L 706
>gi|289580739|ref|YP_003479205.1| helicase [Natrialba magadii ATCC 43099]
gi|448284404|ref|ZP_21475664.1| helicase [Natrialba magadii ATCC 43099]
gi|289530292|gb|ADD04643.1| helicase [Natrialba magadii ATCC 43099]
gi|445570739|gb|ELY25298.1| helicase [Natrialba magadii ATCC 43099]
Length = 986
Score = 198 bits (503), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/426 (33%), Positives = 218/426 (51%), Gaps = 48/426 (11%)
Query: 920 EAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
E P FDS P +I + N+ Q A+ K + A+D ALI G PGTGKT T+
Sbjct: 593 EEPEFDS-------PDEVFIDN----NEAQDEAVRKAVGAEDCALIHGPPGTGKTYTIAR 641
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQ---SID---FVRIGRHEVVHKEIQKHCL 1033
A++A++ RG +LL+++TN AVDN L L Q ID VR+G V +++Q +
Sbjct: 642 AIRAMVERGERVLLSAFTNRAVDNALEALLDQLEGVIDEDRIVRVGSESGVREDMQPYRF 701
Query: 1034 SAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
+ L +VVA T + ++ ++ FDV ++DEA Q T P + +
Sbjct: 702 D--RSGDPGDRAAALQNAQVVAATTATCGSRVMKEQAFDVALVDEAAQLTEPGTFAAVNL 759
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A +FVLVGDH QLPP+V++ EN + SLF RL E HP+A L QYRM Q I +
Sbjct: 760 ADRFVLVGDHEQLPPVVRA----ENDLTESLFERLVELHPEAGVMLTQQYRMNQRIQAFA 815
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR---PVIFVNTDMLPAYEAK 1210
+ Y +L + +A + DL+ S +E L P R V FV A E +
Sbjct: 816 SQEFYDGKLRPANGAVAGRTL--DDLAGVS---REDL-PTRIRDAVSFV------AVEGE 863
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDK 1270
+ + EA IA + ++ ++ DIG+I P+ +Q + I + +V + T+D+
Sbjct: 864 SSR-YTDSAEATRIADLIEDYRAAGLDPSDIGVIAPFRAQVSEISRHVP-EAVAVDTVDR 921
Query: 1271 YQGRDKDCILVSFVRSS--ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
+QG ++ I+VSF + E P + D+ RINVALTR K+ L++VG L P
Sbjct: 922 FQGSSQEVIIVSFTATGTLEGP------IFDDYRRINVALTRPKRALVLVGDPNALETDP 975
Query: 1329 LLKLLI 1334
+ ++
Sbjct: 976 VYARML 981
>gi|440713093|ref|ZP_20893698.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
gi|436442112|gb|ELP35280.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SWK14]
Length = 735
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 148/481 (30%), Positives = 229/481 (47%), Gaps = 74/481 (15%)
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQDP-------ALSYIWSEKSLNDDQRRAIIKVLTA 959
+S +LR +++ ++ PR D + + D L+ I LN QR A+ + A
Sbjct: 238 GRSGKLRDVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMA 297
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
D A+I G PGTGKT+T+ + + RG +L + +N+AVDNLL +L + VR+G
Sbjct: 298 DDVAIIHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVCLMPNVVRVG 357
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
V + +Q+H L A+ ++++++ LDQ+
Sbjct: 358 HPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELF 417
Query: 1052 ------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
V T I LL+D+ FDV ++DE+ Q T P
Sbjct: 418 NEAGRLRGMIRSQERSIVRAVIDRADVICTTTTIDEELLSDQSFDVVVVDESCQCTEPGM 477
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMC 1146
++ A + +L GDH QLPP V S +A GM SL +RL + + I L QYRM
Sbjct: 478 WQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMN 537
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IM S+ Y L IA+A +K L P ++E P++ ++T
Sbjct: 538 ESIMRFSSDHFYDGTL------IADASVKRHLLCDL-PNVEENDFTSEPLLLIDT-AGAG 589
Query: 1207 YEAK---DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV 1263
YE + D Q+ N EA +I ++ ++L + G I +I PY +Q +R L + +
Sbjct: 590 YEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQVRNLRMRLDLDGI 649
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI T+D +QGR+K+ +L++ RS NP + L D R NVALTRAK+KLI+VG T
Sbjct: 650 EIDTVDGFQGREKEVVLITMTRS--NP-DGEIGFLSDQRRSNVALTRAKRKLIVVGDSAT 706
Query: 1324 L 1324
L
Sbjct: 707 L 707
>gi|448568233|ref|ZP_21637810.1| ATP-dependent DNA helicase Dna2 [Haloferax lucentense DSM 14919]
gi|448600826|ref|ZP_21656205.1| ATP-dependent DNA helicase Dna2 [Haloferax alexandrinus JCM 10717]
gi|445727183|gb|ELZ78797.1| ATP-dependent DNA helicase Dna2 [Haloferax lucentense DSM 14919]
gi|445734839|gb|ELZ86395.1| ATP-dependent DNA helicase Dna2 [Haloferax alexandrinus JCM 10717]
Length = 884
Score = 197 bits (501), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 135/390 (34%), Positives = 196/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTYTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D VR+G V +++Q LS + + L VVA T +
Sbjct: 574 EALRDQGFDDIVRVGTESGVREDMQDVRLSRSGDPNA--LAAALRDAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASKEFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NP EA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPTEADRVAEVVAAYEAAGVDIDDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + E L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|156394071|ref|XP_001636650.1| predicted protein [Nematostella vectensis]
gi|156223755|gb|EDO44587.1| predicted protein [Nematostella vectensis]
Length = 314
Score = 197 bits (501), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 173/298 (58%), Gaps = 22/298 (7%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFD-DQGKCDV-GRENNFLIVHP 449
KVLR+ E E+ V+L EDW T + PGD V+V G FD + G C + NN++IVHP
Sbjct: 15 KVLRVFEETVSHEKYVYLREDWEGTDVEPGDIVHVTGVFDINSGVCILDNTANNYIIVHP 74
Query: 450 DVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEE 509
D L+SGT +A + C RRS+L+ER + + + + L+GTLLH +F + + L
Sbjct: 75 DTLISGTTIAGATRCLRRSILNERFRTEDANEAMLMGTLLHDLFDRAMKSNDFSHDALLC 134
Query: 510 YARLVLQK--NIESLYACGVNENDIHKTLVEAIPKMLNWIILFK-DSQDLNTPTVDF--- 563
+ +L++ ++ Y G+ E D + E +P W + D D + T+D+
Sbjct: 135 AVQGLLEQFTYLDGFYGLGMTECDALNKVKELLPAFSEWAWRYVCDLPDPDLSTMDYKDG 194
Query: 564 ----GSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIE----SKR------NEI 609
G + + +S++ DIEE W+P++GLKG +DA++ VKI+ S+R N +
Sbjct: 195 SCDTGGTEMPSVCVSQLRDIEENVWSPRFGLKGKVDATVEVKIDRRPMSRRHRPGMDNHL 254
Query: 610 NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGV 667
+PLE KTGK+ + S+EHRAQVILYTLL+S+RY ID+GLLYY++S T GV
Sbjct: 255 TTASVPLELKTGKLFSKLGSVEHRAQVILYTLLLSDRYRHGIDTGLLYYMKSGHTIGV 312
>gi|87311458|ref|ZP_01093578.1| DNA-binding protein [Blastopirellula marina DSM 3645]
gi|87285870|gb|EAQ77784.1| DNA-binding protein [Blastopirellula marina DSM 3645]
Length = 687
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/506 (28%), Positives = 244/506 (48%), Gaps = 82/506 (16%)
Query: 880 VWRIDKDEIMTSFS---VMRYNLVQLFLQSA-----QSSQLRRMIVDLEAPRFDSGSVFS 931
+W ++D++ + S + R + L++A ++++LR ++++L++P FD
Sbjct: 178 LWEGEEDKLSVAISTDEIARKRQERAMLKAASACGSRTAELRDVLLELQSPSFDE----- 232
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+D +L+ LN Q+ A+ L+A+D+++I G PGTGKT T+ V+A + RG +
Sbjct: 233 RDESLA----SPQLNASQQAAVQLALSARDFSIIHGPPGTGKTITLAEIVRAAVARGEKV 288
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--------------- 1036
L + +N AVDNL+ + + + VR+G V + + L A+
Sbjct: 289 LACAPSNLAVDNLVERFWACGLKAVRLGHPARVSESLHDALLEALVREHPDAKLAEKLVS 348
Query: 1037 ---------------------NINSVEEIKKRLDQVKVVA------------VTCLGIT- 1062
+ +E ++ LD + V C +T
Sbjct: 349 EAKTLFRKADRFTRSKPAPGEKRSLRDEARELLDDAARIQQQTLERLLDDAPVVCCTLTG 408
Query: 1063 --NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGM 1120
+ LL ++FD+ ++DEA QTT P P+ + + V+ GDH QLPP + S EA G
Sbjct: 409 VDDDLLGARRFDLAVIDEACQTTEPACWIPVSRSQRLVIAGDHCQLPPTIVSREAEAAGF 468
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
+S+ RL +PQA L+ QYRM IME S+ Y L +D A ++
Sbjct: 469 GVSMLERLIARYPQAAQRLELQYRMHAHIMEFSSLEFYDGALL--ADPSVEAHSLTDLIA 526
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAK-DHQTLNNPVEACLIAKITQELVKNEIEGK 1239
+ W K PV F +T E + D + NP EA L+ + +L+ E+ +
Sbjct: 527 ADELWAK-------PVQFFDTAGADYQEEQDDSSSRTNPREAELVVRKVNQLIALEMPPE 579
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
I +I+PY +Q L+R SL VE ++D +QGR+++ ++ S VRS+E L
Sbjct: 580 QIAVISPYAAQVRLLRESLP-GGVECDSVDGFQGREQEVVICSLVRSNEKGE---IGFLA 635
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLS 1325
D R+NVA+TRAK+KLI++G T+
Sbjct: 636 DVRRMNVAMTRAKRKLIVIGDSSTIG 661
>gi|448313636|ref|ZP_21503349.1| DNA replication factor Dna2 [Natronolimnobius innermongolicus JCM
12255]
gi|445597569|gb|ELY51643.1| DNA replication factor Dna2 [Natronolimnobius innermongolicus JCM
12255]
Length = 924
Score = 197 bits (500), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 201/400 (50%), Gaps = 33/400 (8%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
N Q A+ K + A+D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 544 NAAQNEAVTKAVGARDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 603
Query: 1006 IKLKSQ-----SID---FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVT 1057
+ Q ID VR+G V +++ + L E+ L +VVA T
Sbjct: 604 EAVLEQLEERGEIDADRVVRVGSESGVRDDMEPYRLE--RAGDPEDRLAELQNAQVVAAT 661
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
+ ++ ++ FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ E
Sbjct: 662 TATCGSRVMKEQAFDVALVDEAAQLTEPGTHAAINLADRFVLVGDHEQLPPVVRA----E 717
Query: 1118 NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS 1177
N + SLF RL E HP A L QYRM Q I ++ Y L E+A +
Sbjct: 718 NDLTESLFERLIELHPDAGVMLDRQYRMNQRIQAFASREFYDGALRPAEPEVAARTL--D 775
Query: 1178 DLSSCSPWLKEALNPC--RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE 1235
DL + ++AL PV FV+ + D + EA IA + +
Sbjct: 776 DLEGVT---RDALPAALRDPVAFVDVE-------GDGGQYTDSEEAAEIADLIETYEAAG 825
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
+E +IGII P+ +Q + I + V + T+D++QG ++ I+VSF +
Sbjct: 826 LERSEIGIIAPFRAQVSEISTHVP-DDVAVDTVDRFQGSSQELIVVSFTATG----TLEG 880
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ D+ RINVALTR K+ L++VG L P+ ++
Sbjct: 881 PIFEDYRRINVALTRPKRALVLVGDASALGSDPVYGRMLE 920
>gi|417303798|ref|ZP_12090840.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
gi|327539896|gb|EGF26498.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica WH47]
Length = 735
Score = 196 bits (499), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 146/481 (30%), Positives = 228/481 (47%), Gaps = 74/481 (15%)
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQDP-------ALSYIWSEKSLNDDQRRAIIKVLTA 959
+S +LR +++ ++ PR D + + D L I LN QR A+ + A
Sbjct: 238 GRSGKLRDVLLGIKTPRVDGNPIDTHDIDPESFQFELKDIDFRTELNPPQRDAVAFAMMA 297
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
D A+I G PGTGKT+T+ + + RG +L + +N+AVDNLL +L + +R+G
Sbjct: 298 DDVAIIHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVIRVG 357
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
V + +Q+H L A+ ++++++ LDQ+
Sbjct: 358 HPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELF 417
Query: 1052 ------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
V T I LL+D+ FD+ ++DE+ Q T P
Sbjct: 418 NEAGRLRGMIRSQERSIVRAVIDRADVICTTTTIDEELLSDQSFDLVVVDESCQCTEPGM 477
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMC 1146
++ A + +L GDH QLPP V S +A GM SL +RL + + I L QYRM
Sbjct: 478 WQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMN 537
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IM S+ Y L IA+A +K L P ++E P++ ++T
Sbjct: 538 ESIMRFSSDHFYDGTL------IADASVKRHLLCDL-PNVEENDFTSEPLLLIDT-AGAG 589
Query: 1207 YEAK---DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV 1263
YE + D Q+ N EA +I ++ ++L + G I +I PY +Q +R L + +
Sbjct: 590 YEEELEPDGQSKLNHGEAKVILQLVKQLADMGVTGDQIAVIAPYAAQVRNLRMRLDLDGI 649
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI T+D +QGR+K+ +L++ RS NP + L D R NVALTRAK+KLI+VG T
Sbjct: 650 EIDTVDGFQGREKEVVLITMTRS--NP-DGEIGFLSDQRRSNVALTRAKRKLIVVGDSAT 706
Query: 1324 L 1324
L
Sbjct: 707 L 707
>gi|32471647|ref|NP_864640.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
gi|32397018|emb|CAD72321.1| DNA-binding protein SMUBP-2 [Rhodopirellula baltica SH 1]
Length = 763
Score = 196 bits (498), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/481 (30%), Positives = 229/481 (47%), Gaps = 74/481 (15%)
Query: 907 AQSSQLRRMIVDLEAPRFDSGSVFSQDP-------ALSYIWSEKSLNDDQRRAIIKVLTA 959
+S +LR +++ ++ PR D + + D L+ I LN QR A+ + A
Sbjct: 266 GRSGKLRDVLLGIKTPRVDGNPIDTHDIDPESFQFELNDIDFRTELNPPQRDAVAFAMMA 325
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
D A+I G PGTGKT+T+ + + RG +L + +N+AVDNLL +L + VR+G
Sbjct: 326 DDVAIIHGPPGTGKTTTIAEIIAQSVERGERVLACAASNTAVDNLLERLVRLMPNVVRVG 385
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
V + +Q+H L A+ ++++++ LDQ+
Sbjct: 386 HPARVFESLQEHTLDALVESDPTSTVIKDLRRELDQILREANRPIREGGGRERKQRAELF 445
Query: 1052 ------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
V T I LL+D+ FD+ ++DE+ Q T P
Sbjct: 446 NEAGRLRGMIRSQERSIVRAVIDRADVICTTTTIDEELLSDQSFDLVVVDESCQCTEPGM 505
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMC 1146
++ A + +L GDH QLPP V S +A GM SL +RL + + I L QYRM
Sbjct: 506 WQAILRADRLILAGDHCQLPPTVLSDDAARIGMRDSLMQRLVHRYGEKIYRRLTVQYRMN 565
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IM S+ Y L IA+A +K L P ++E P++ ++T
Sbjct: 566 ESIMRFSSDHFYDGTL------IADASVKRHLLCDL-PNVEENDFTSEPLLLIDT-AGAG 617
Query: 1207 YEAK---DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV 1263
YE + D Q+ N EA +I ++ ++L + G I +I PY +Q +R L + +
Sbjct: 618 YEEELEPDGQSKLNHGEAKVILQLVKQLADLGVTGDQIAVIAPYAAQVRNLRMRLDLDGI 677
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI T+D +QGR+K+ +L++ RS NP + L D R NVALTRAK+KLI+VG T
Sbjct: 678 EIDTVDGFQGREKEVVLITMTRS--NP-DGEIGFLSDQRRSNVALTRAKRKLIVVGDSAT 734
Query: 1324 L 1324
L
Sbjct: 735 L 735
>gi|383458482|ref|YP_005372471.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
gi|380730970|gb|AFE06972.1| putative DNA helicase [Corallococcus coralloides DSM 2259]
Length = 653
Score = 195 bits (496), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 229/502 (45%), Gaps = 85/502 (16%)
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+ Q R +++ E PRFD+ F+ + LN +Q+ A ++ L A+D+
Sbjct: 161 MDKGQERHKREVLLGNEPPRFDNTKDFT---------PTRPLNPEQQDAAMRALAAEDFF 211
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
L+ G PGTGK++ + + RG +L T+ +N+AVD+LL Q + +R+G
Sbjct: 212 LVHGPPGTGKSTVLAEVAAQAVARGERLLCTAASNAAVDHLLELCLEQGLRAIRVGHPAR 271
Query: 1024 VHKEIQKHCL------------------SAMNI---------------------NSVEEI 1044
V +Q+H L A ++ +S E
Sbjct: 272 VAARLQEHTLDIVVEEHPDRVVSRDLFDEAFDLFGYARRQRSQGRSRERFSNARSSTAEA 331
Query: 1045 KKRLDQVK---------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
K +D+ + VV VT + + +L ++FD ++DEA Q T P++L
Sbjct: 332 KDLMDEARKLEKKAVKAVLARADVVCVTLASLGSGVLAGEEFDRALLDEATQATEPLALL 391
Query: 1090 PLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQG 1148
+ A K VL GD QLPP V S EA + G+ SLF RL ++H + L+ QYRM
Sbjct: 392 GFLRAPKVVLAGDPQQLPPTVLSQEAAKAGLGTSLFERLLQDHGDEVKRMLREQYRMNAA 451
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
IM + +YG L A+ + LSS A PV++++T A +
Sbjct: 452 IMAFPSKEMYGGELR------AHPSVADRTLSSVLDSGSGAEVDAPPVLYLDT----AGK 501
Query: 1209 AKDHQ------TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-- 1260
D + +L NP EA + ++L+ + +++ +I PY++QA +R +L
Sbjct: 502 GFDEEVEPTTHSLLNPGEATYVIARVRQLLSLGLAPREVAVIAPYSAQARHLREALEAVH 561
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
VE+ T+D +QGR+KD ILVS RS+ L D R+NVALTRA++ L +VG
Sbjct: 562 PEVEVDTVDAFQGREKDAILVSMTRSNS---EGQLGFLNDLRRMNVALTRARRHLFVVGD 618
Query: 1321 CRTLSKVPLLKLLINKVGEQSG 1342
TLS P I G
Sbjct: 619 SATLSSHPFYARFIEGTQTDGG 640
>gi|194218569|ref|XP_001917022.1| PREDICTED: DNA-binding protein SMUBP-2 [Equus caballus]
Length = 1004
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 173/573 (30%), Positives = 278/573 (48%), Gaps = 86/573 (15%)
Query: 823 TLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD-SLLHEV 880
+ SGD V L ++ + +A+G++T I++ VSV+F + S D SL E
Sbjct: 102 SFTSGDIVGLYDAANEGSQLATGILTRITQKSVSVAF---------DESHDCQLSLDRES 152
Query: 881 -WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+R+ K ++ + L+ L S +S L ++ AP S S+ L++
Sbjct: 153 SYRLLKLANDVTYKRQKKALITLRKYHSGPASSLIEVLFGASAP-----SPASEIGPLTF 207
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + ++ +G +L + +N
Sbjct: 208 CNA--SLDASQKEAVKFALSQKELAVIHGPPGTGKTTTVVEVILQVVKQGLKVLCCAPSN 265
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-- 1051
AVDNL+ +L +R+G + + IQ+H L A+ N V +I+K +DQV
Sbjct: 266 IAVDNLVERLAQCKQRILRLGHPARLLESIQQHSLDAVLARSDNAQIVADIRKDIDQVFV 325
Query: 1052 ----------------------------------------KVVAVTCLGIT--NPL--LT 1067
VV T G + PL L
Sbjct: 326 KNKKIQEKQEKSNFRSEIKLLRKELKEREEAAMLESLTSADVVLATNTGASPDGPLKLLP 385
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
D FDV ++DE Q PL+ A K VL GDH QLPP + S +A G+ +SL R
Sbjct: 386 DGYFDVVVIDECAQALEASCWIPLLKARKCVLAGDHKQLPPTIVSHKAALAGLSLSLMER 445
Query: 1128 LSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L +E+ + + L QYRM Q IM+ ++ +Y +L+ +A ++ DL P +
Sbjct: 446 LDQEYGARVVRTLTVQYRMHQAIMQWASEALYAGQLT-AHPSVAGHLLR--DL----PGV 498
Query: 1187 KEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
P++ V+T + E +D Q+ NP E L+A Q LV + DI +I
Sbjct: 499 AATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVALHVQALVDAGVCASDIAVI 558
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
TPYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L +
Sbjct: 559 TPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDR 615
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RINVA+TRA++ + +V RT++ LK L++
Sbjct: 616 RINVAVTRARRHVAVVCDSRTVNNHAFLKTLLD 648
>gi|448437348|ref|ZP_21587374.1| DNA replication factor Dna2 [Halorubrum tebenquichense DSM 14210]
gi|445681285|gb|ELZ33720.1| DNA replication factor Dna2 [Halorubrum tebenquichense DSM 14210]
Length = 906
Score = 194 bits (494), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 255/984 (25%), Positives = 413/984 (41%), Gaps = 166/984 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+GE V LW W T G + V +D+ + +VG + +++++ PD LV
Sbjct: 36 AGEPVDVTLWGKWTETAEHAETGMELLVTETEEDEYRGEVGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L+
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-----------------GDLLR 137
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
++E+ A V+E + L L + + + G L +
Sbjct: 138 GVDLEASIADRVDEAGLELGL-------LGYEREEVEDEVRRNAAAVEGWLAQGTLSDED 190
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
E +P +GLKG DA R P+E KTGK + + Q
Sbjct: 191 TWRSEFTLISPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDACMVVSG---RLDQE 343
Query: 743 AKEMQV---VKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPS 799
+K Q+ V +E R ++F ++I E ++++ + R ++ +
Sbjct: 344 SKAGQIGTPVPDE---ER----DYFDRFYTAI----EEERRETHAEYRKLWE------QT 386
Query: 800 PNLNASDGDSLIG----------------AAIPTKDMDCTLRSGDYVILSTESDRLAVAS 843
P A+D +LIG A D LR GD V L+++ D ++ +
Sbjct: 387 PEERAADDRALIGLEPAGQTEIDDARWELRARKPGDAVSKLREGD-VALASDGDPVSGHA 445
Query: 844 --GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
G I E+ V V +P+ E+ R+D + SV R +L
Sbjct: 446 ELGRIVELGGDEVVVEADEPV----------------ELRRLDV--YPSEISVDR-SLTA 486
Query: 902 LFLQSAQSSQLRR-MIVDLEAPRF------DSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
L + ++ R+ ++ P F +GS DP + + ND Q A+
Sbjct: 487 LHDAVLKGNEARKDVLFGRREPAFRDPADRSTGSPGPADPDAPEAYIDN--NDAQNEAVE 544
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
+ A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D
Sbjct: 545 LAVDAEDCALIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFD 604
Query: 1015 FV-RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
V R+G V +++ L + + + R V G + +L + +FDV
Sbjct: 605 DVLRVGTETGVRDDMRDVRLVQRGDPNAKAAELRDAPVVAATTAACG--SRVLRECEFDV 662
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
++DEA Q T P + + A +FVLVGDH QLPP+V++ EN + SLF RL + +P
Sbjct: 663 ALVDEASQLTEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLSTSLFERLIDAYP 718
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP- 1192
+A L QYRM Q I ++A Y L + E+A + +DL P +AL P
Sbjct: 719 EASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADL-GVDP---DALAPE 772
Query: 1193 -CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
V FV+ PA E ++ + EA +A + V ++ DIG+I P+ +Q
Sbjct: 773 LTGGVGFVD----PAGERDGNRNVR---EAERVAAVVDAYVAAGVDPDDIGVIAPFRAQV 825
Query: 1252 NLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
I V+ + T+D++QG K+ I+VS V + + + D R+NVALTRA
Sbjct: 826 AEIGRRTDVT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFEDHRRVNVALTRA 878
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLIN 1335
KK+L +VG L P L+
Sbjct: 879 KKQLTIVGDADALGFDPFYARLLE 902
>gi|284166179|ref|YP_003404458.1| DNA replication factor Dna2 [Haloterrigena turkmenica DSM 5511]
gi|284015834|gb|ADB61785.1| DNA replication factor Dna2 [Haloterrigena turkmenica DSM 5511]
Length = 902
Score = 194 bits (493), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 204/398 (51%), Gaps = 31/398 (7%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D+ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 524 NDAQDEAVRLAVGAEDFALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 583
Query: 1006 IKLKSQ------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
L Q VR+G V ++++ + L E+ L+ +VVA T
Sbjct: 584 QALLEQLDDVVDDERVVRVGSESGVREDMEPYRLE--RAGDPEDRVAELENAQVVAATTA 641
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
+ ++ ++ FD ++DEA Q T P + A +FVLVGDH QLPP+V++ EN
Sbjct: 642 TCGSRIMKEQSFDAALVDEAAQLTEPGTHAATNLAERFVLVGDHEQLPPVVRA----END 697
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+ SLF RL + HP A L QYRM Q I ++ Y +L E+A + DL
Sbjct: 698 LTESLFERLVDLHPDAGVMLDRQYRMNQRIQAFASNEFYDGQLRPAEPEVAARTL--DDL 755
Query: 1180 SSCSPWLKEAL--NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
+ +EAL + PV FV+ + D + EA IA + + +E
Sbjct: 756 EGVA---REALPADLRDPVAFVDVE-------GDGGQYTDSQEAARIADLIETYEAAGLE 805
Query: 1238 GKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DIG+I P+ +Q + I + V + T+D++QG ++ I+VSF + +
Sbjct: 806 RSDIGVIAPFRAQVSEISKHVP-DEVAVDTVDRFQGSSQEVIIVSFTATG----TLEGPI 860
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D+ RINVALTR K+ L++VG L+ P+ + ++
Sbjct: 861 FEDYRRINVALTRPKRALVLVGDSNALATDPVYERMLE 898
>gi|448361846|ref|ZP_21550459.1| helicase [Natrialba asiatica DSM 12278]
gi|445649526|gb|ELZ02463.1| helicase [Natrialba asiatica DSM 12278]
Length = 957
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/429 (31%), Positives = 205/429 (47%), Gaps = 61/429 (14%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ K + A D ALI G PGTGKT T+ A++A++ RG +LL+++TN AVDN L
Sbjct: 547 NDAQDEAVRKAVGADDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNAL 606
Query: 1006 IKLKSQ---------------------SIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
L Q ++D VR+G V +++Q + L E
Sbjct: 607 EALLDQLEGEIGEDSVASPAQRNGDGEAVDVVRVGSESGVREDMQPYRLD--RAGEPGER 664
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
L +VVA T + ++ +++FD ++DEA Q T P + + A FVLVGDH
Sbjct: 665 AATLQNAQVVAATTATCGSRVMKEQRFDAALVDEAAQLTEPGTHAAINLADWFVLVGDHE 724
Query: 1105 QLPPLVQST-------------EARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIME 1151
QLPP+VQS E R + SLF RL + +P A L QYRM Q I
Sbjct: 725 QLPPVVQSEGRTRRVSSGANGDEPRAADLTESLFERLVDLYPGAGVMLTKQYRMNQRIQA 784
Query: 1152 LSNALIYGDRLSCGSDEIANAKIKVSDLSSCS-PWLKEALNPCRPVIFVNTDMLPAYEAK 1210
++ Y L + ++A + DLS + L L V FV+ D
Sbjct: 785 FASQEFYDGELRPATGDVAGRTL--DDLSGVTRDDLPTELRGA--VTFVDVD-------G 833
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDK 1270
D + EA IA++ +E + DIG+I P+ +Q + + + + V + T+D+
Sbjct: 834 DGSRYTDSEEAARIAEMVEEFRAAGLSPADIGVIAPFRAQVSELSKHVP-AEVAVDTVDR 892
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLG----DWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QG ++ I+VSF T SL G D+ RINVALTR K+ L++VG L+
Sbjct: 893 FQGSSQEVIIVSF--------TATDSLEGPIFDDYRRINVALTRPKRALVLVGDANALAT 944
Query: 1327 VPLLKLLIN 1335
P+ ++
Sbjct: 945 DPVYSRMLE 953
Score = 45.4 bits (106), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/317 (19%), Positives = 130/317 (41%), Gaps = 32/317 (10%)
Query: 374 EVSEKNRPADPVDAKSPYKVLRLLNEQSGEERAVHLWEDWFHT--VIAPGDTVNVIGEFD 431
+V+ P D V+ ++ L ++ + + LW W + ++ PG + V +
Sbjct: 26 DVTATTSPFDAVETETDGGTLSDGAARAADSTTITLWNKWTESAELLEPGMELLVTDAEE 85
Query: 432 DQGKCD---VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERLKCSERSISALLGTL 488
D+ + + +++++V P V+ T + CPR L+ +L + + GTL
Sbjct: 86 DEFRGEQRYATTGDSYVVVAPSFHVNVTAIRNWVECPRLYYLN-KLSGVPLNYPVVKGTL 144
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
+H++F ++ + LEE +++ L G + + + + E + W+
Sbjct: 145 VHEVF-----GDLLRGRDLEESIDARVEERGLELGLLGETADAVAEDVRENAKAIEGWLE 199
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
+ +++ D + S + E++ + +G++G DA R
Sbjct: 200 QGRLTEEERATAADNSERAFTPAESSWRS--EQLLISETFGIRGRADAIRRGA------- 250
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
P+E KTGK + + + Q Y LL+ E + +D+G L Y T+
Sbjct: 251 ------PVELKTGKNLKKEPRFKDKVQAACYALLLEE-HGGDVDTGTLLY-----TKNSA 298
Query: 669 VQRSDLVGLIMRRNEFA 685
+ R++ G + EF+
Sbjct: 299 LDRNEETGDLTPAKEFS 315
>gi|292656885|ref|YP_003536782.1| ATP-dependent DNA helicase Dna2 [Haloferax volcanii DS2]
gi|448290886|ref|ZP_21482031.1| ATP-dependent DNA helicase Dna2 [Haloferax volcanii DS2]
gi|291372654|gb|ADE04881.1| ATP-dependent DNA helicase Dna2 [Haloferax volcanii DS2]
gi|445577939|gb|ELY32359.1| ATP-dependent DNA helicase Dna2 [Haloferax volcanii DS2]
Length = 884
Score = 194 bits (492), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 195/390 (50%), Gaps = 25/390 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L
Sbjct: 514 NDAQDDAVRLAVDADDLALIHGPPGTGKTHTIARTIRALVEDGNRVLLSAFTNRAVDNAL 573
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q + VR+G V +++Q LS + L VVA T +
Sbjct: 574 EALRDQGFENIVRVGTESGVREDMQDVRLS--RSGDPNALAAALRNAPVVAATTASCGSR 631
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
++ ++ FD ++DEA Q T P +L + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 632 VMREQSFDAALVDEASQITEPGTLAAVNLADRFVLVGDHKQLPPVVRA----ENDLQTSL 687
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++ Y L + +A ++ DL +
Sbjct: 688 FQRLIETYPDASVMLDRQYRMSQRIQAFASREFYDGALRPATGAVAAQHLR--DLGVDTA 745
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L L V FV+ D NP EA +A++ ++ DIG+I
Sbjct: 746 DLPAEL--ADQVAFVDPDGRRVGN-------TNPTEADRVAEVVAAYEAAGVDADDIGVI 796
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I + + T+D++QG K+ I+VSFV + E L D RI
Sbjct: 797 APFRAQVAEISRRTDAT---VDTVDRFQGSSKEVIVVSFVATGE----LDGPLFEDHRRI 849
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAKK L +VG L P ++
Sbjct: 850 NVALTRAKKALCLVGDADALESDPFYDRML 879
>gi|432091028|gb|ELK24240.1| DNA-binding protein SMUBP-2 [Myotis davidii]
Length = 948
Score = 194 bits (492), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 265/545 (48%), Gaps = 71/545 (13%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
+ SGD V L+ E +LA +G++T I++ V+V+F + DS L
Sbjct: 321 SFSSGDVVGLNDEGGQLA--TGVLTRITQKSVTVAFDQ-----------SCDSQL----- 362
Query: 883 IDKDEIMTSFSVMR-YNLVQLFLQSAQSSQLRRMIVDLE----APRFDSGSVFSQDPALS 937
SF Y L++L +L++ ++ L+ P F V D A S
Sbjct: 363 --------SFDQQNSYRLLKL-ANDVTYKRLKKALIALKKYHTGPAFSLIEVLFGDAAPS 413
Query: 938 YIWSEKS-------LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
++ L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G
Sbjct: 414 PAGDTRAPTFYNAALDASQQEAVSFALAQKELAIIHGPPGTGKTTTVVEFILQAVKQGCK 473
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
+L + +N AVDNL+ R+ + +Q+H L A+ S V +I+
Sbjct: 474 VLCCAPSNIAVDNLVXXXXXXXXHPARL------LEAVQQHSLDAVLARSDGAQIVADIR 527
Query: 1046 KRLDQVKVVAVTCLGITNPL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDH 1103
+ +DQV V A PL L D FDV ++DE Q PL+ A K VL GDH
Sbjct: 528 RDIDQVSVRASP----DGPLKLLPDGYFDVVVIDECAQALEASCWVPLLKARKCVLAGDH 583
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEE-HPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLPP + S +A G+ +SL RL++ A+ L QYRM + IM+ ++ +Y +L
Sbjct: 584 KQLPPTIVSPKAALAGLSLSLMERLAQGCCAGAVRTLTVQYRMHRAIMQWASEALYRGQL 643
Query: 1163 SCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVE 1220
+ + A+ + DL + + L P++ V+T L E ++ Q+ NP E
Sbjct: 644 TA---HPSVAEHLLRDLPGVAATEETGL----PLLLVDTAGCGLSELEEEEDQSKGNPGE 696
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDC 1278
L++ Q LV + DI +ITPYN Q +L+R SL+ +EI ++D +QGR+K+
Sbjct: 697 VRLVSLHVQALVDAGVPASDIAVITPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEA 756
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
+++SFVRS+ R L + RINVA+TRA++ + +V RT+S LK L++
Sbjct: 757 VVLSFVRSN---RRGEVGFLAEDRRINVAITRARRHVAIVCDSRTVSSHAFLKTLVDYFA 813
Query: 1339 EQSGI 1343
E +
Sbjct: 814 EHGEV 818
>gi|427781487|gb|JAA56195.1| Putative dna replication helicase [Rhipicephalus pulchellus]
Length = 773
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 172/646 (26%), Positives = 301/646 (46%), Gaps = 123/646 (19%)
Query: 767 CLSSIVLDASNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCTL 824
C++ +VLD + H Y R V F H P P+ S+GD ++G
Sbjct: 65 CITKLVLDCA--HTGLY--GRTVCKFRSCHHGAPLPSHGFSNGD-IVG------------ 107
Query: 825 RSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
V++++++ R + SG+++ ++ +++++F + GR++ D + + ++
Sbjct: 108 -----VVVASDAAREVICSGVVSSVAPANITLAFDE-----GRDTLDADDGRVFNLLKLA 157
Query: 885 KD----------EIMTSFSVMRY-NLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
D E + +RY NL+++ + + EAP SQ
Sbjct: 158 NDVTYRRLKRTLEKLRKTREIRYSNLIEILFGTVSPT---------EAP-----ISASQK 203
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P +S K+L++ Q+ A+ L K+ A+I G PGTGKT+T+V + +G+ +L+
Sbjct: 204 P---IEFSNKALDESQQEAVAFSLRQKELAIIHGPPGTGKTTTLVEVILQCSKQGSKVLV 260
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRL 1048
+ +N AVDNL+ +L S+ VR+G + I +H L A+ S + +I+K +
Sbjct: 261 CAPSNVAVDNLVERLLCTSLKVVRLGHPARLLPAIARHSLDAILARSDDFAIIGDIRKEI 320
Query: 1049 DQ--------------------------------------------VKVVAVTCLGITNP 1064
D+ V + +T P
Sbjct: 321 DELMSSSSKSKAKDKGYQMRGKLSELRKELKDRERRAIGRILASADVVLSTLTTASDDGP 380
Query: 1065 L--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
L L + F V ++DE Q L+ A K +L GDH QLPP + S A + G+E+
Sbjct: 381 LKNLPEGHFQVAVIDECSQALEVACWMALLRAPKCILAGDHLQLPPTIVSEAAAKGGLEV 440
Query: 1123 SLFRRLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+L R H +A + L +QYRM + IM S+ +YG RL +A+A + L
Sbjct: 441 TLMERALRLHGEAVVRMLVTQYRMHELIMRWSSDRLYGGRL------LAHASVAAHLLRD 494
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYE--AKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
P +++ + P++ ++T E D ++ N EA L+A + LV + +
Sbjct: 495 L-PGVEDNDDTALPLLLIDTAGCGMVELDTPDDESKGNEGEADLVAIHVERLVSSGVPAS 553
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
+I +I+PYN Q LIR LS +EI ++D +QGR+K+ +++SFVRS++ T
Sbjct: 554 EIAVISPYNLQVELIRLRLSAQHPGLEIRSVDGFQGREKEAVVMSFVRSNDTG---TVGF 610
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
L + RINVA+TRA++ L +V T+S+ LK L++ +G + +
Sbjct: 611 LAEDRRINVAVTRARRHLAVVCDSTTMSRHDFLKSLVDYIGNEGEV 656
>gi|427779915|gb|JAA55409.1| Putative dna replication helicase [Rhipicephalus pulchellus]
Length = 733
Score = 193 bits (491), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 172/646 (26%), Positives = 301/646 (46%), Gaps = 123/646 (19%)
Query: 767 CLSSIVLDASNEHQKSYRDNRFVYHFVRQH--MPSPNLNASDGDSLIGAAIPTKDMDCTL 824
C++ +VLD + H Y R V F H P P+ S+GD ++G
Sbjct: 65 CITKLVLDCA--HTGLY--GRTVCKFRSCHHGAPLPSHGFSNGD-IVG------------ 107
Query: 825 RSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
V++++++ R + SG+++ ++ +++++F + GR++ D + + ++
Sbjct: 108 -----VVVASDAAREVICSGVVSSVAPANITLAFDE-----GRDTLDADDGRVFNLLKLA 157
Query: 885 KD----------EIMTSFSVMRY-NLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
D E + +RY NL+++ + + EAP SQ
Sbjct: 158 NDVTYRRLKRTLEKLRKTREIRYSNLIEILFGTVSPT---------EAP-----ISASQK 203
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P +S K+L++ Q+ A+ L K+ A+I G PGTGKT+T+V + +G+ +L+
Sbjct: 204 P---IEFSNKALDESQQEAVAFSLRQKELAIIHGPPGTGKTTTLVEVILQCSKQGSKVLV 260
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRL 1048
+ +N AVDNL+ +L S+ VR+G + I +H L A+ S + +I+K +
Sbjct: 261 CAPSNVAVDNLVERLLCTSLKVVRLGHPARLLPAIARHSLDAILARSDDFAIIGDIRKEI 320
Query: 1049 DQ--------------------------------------------VKVVAVTCLGITNP 1064
D+ V + +T P
Sbjct: 321 DELMSSSSKSKAKDKGYQMRGKLSELRKELKDRERRAIGRILASADVVLSTLTTASDDGP 380
Query: 1065 L--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
L L + F V ++DE Q L+ A K +L GDH QLPP + S A + G+E+
Sbjct: 381 LKNLPEGHFQVAVIDECSQALEVACWMALLRAPKCILAGDHLQLPPTIVSEAAAKGGLEV 440
Query: 1123 SLFRRLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+L R H +A + L +QYRM + IM S+ +YG RL +A+A + L
Sbjct: 441 TLMERALRLHGEAVVRMLVTQYRMHELIMRWSSDRLYGGRL------LAHASVAAHLLRD 494
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYE--AKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
P +++ + P++ ++T E D ++ N EA L+A + LV + +
Sbjct: 495 L-PGVEDNDDTALPLLLIDTAGCGMVELDTPDDESKGNEGEADLVAIHVERLVSSGVPAS 553
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
+I +I+PYN Q LIR LS +EI ++D +QGR+K+ +++SFVRS++ T
Sbjct: 554 EIAVISPYNLQVELIRLRLSAQHPGLEIRSVDGFQGREKEAVVMSFVRSNDTG---TVGF 610
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
L + RINVA+TRA++ L +V T+S+ LK L++ +G + +
Sbjct: 611 LAEDRRINVAVTRARRHLAVVCDSTTMSRHDFLKSLVDYIGNEGEV 656
>gi|449503996|ref|XP_004174557.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
[Taeniopygia guttata]
Length = 1002
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 155/559 (27%), Positives = 268/559 (47%), Gaps = 83/559 (14%)
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE-VWRIDKDEIMTSFSVMRYNL 899
+ +G++T ++ V+V+ +P R+ D HE +R+ K +++ ++ L
Sbjct: 109 LCTGVVTRVTPKAVTVALEEP-----RDGELAVD---HEHSFRLLKLANDVTYNRLKRAL 160
Query: 900 VQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
L + +S L ++ APR F + L + SL++ QR A+ L
Sbjct: 161 TALKQYRGGPASDLIDVLFFASAPR-----AFPETKPLEFF--NASLDESQREAVSFSLA 213
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
++ A+I G PGTGKT+T+V + + +G +L + +N AVDNL+ +L +R+
Sbjct: 214 QRELAIIHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPSNVAVDNLVERLAGCRARLLRL 273
Query: 1019 GRHEVVHKEIQKHCLSAM---------------NINSV---------------------- 1041
G + + IQ+H L A+ +I+
Sbjct: 274 GHPARLLQPIQQHSLDAVLARGDCARLVADIRRDIDQAWVRGPAPQDKGERSHFLGEIKT 333
Query: 1042 --EEIKKR--------LDQVKVVAVTCLGITN----PLLTDKKFDVCIMDEAGQTTLPVS 1087
+E+K+R L Q VV T G ++ LL + FD+ ++DE Q
Sbjct: 334 LRKELKEREEAAMTAALSQASVVLATNTGASSDGPLKLLPETHFDLVVIDECAQALEASC 393
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ-AISALQSQYRMC 1146
PL+ A K +L GDH QLPP + S A G+ +SL RL+ + + A+ L QYRM
Sbjct: 394 WIPLLKAPKCILAGDHKQLPPTIISHRAAAEGLSLSLMERLAGHYGERAVRMLTVQYRMH 453
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ IME +++ +YG RLS + A+ + DL P + + P++ ++T
Sbjct: 454 RHIMEWASSELYGGRLSA---HPSVAQHLLRDL----PGVSDTEETSIPLLLIDTAGCGL 506
Query: 1207 Y--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--S 1262
+ E +D Q+ NP E L+ Q LV ++ KDI ++ PYN Q +++R L
Sbjct: 507 FELEVEDEQSKGNPGEVQLVGMHIQALVDAGVKAKDIAVVAPYNLQVDMLRQHLCHRHPE 566
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCR 1322
+EI ++D +QGR+K+ +++SFVRS+ R L + RINVA+TRA++++ +V
Sbjct: 567 LEIRSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEERRINVAVTRARRQVAVVCDSH 623
Query: 1323 TLSKVPLLKLLINKVGEQS 1341
T+ P L+ L++ + +
Sbjct: 624 TVGSRPFLRRLLDHLAQHG 642
>gi|325104103|ref|YP_004273757.1| ATPase AAA [Pedobacter saltans DSM 12145]
gi|324972951|gb|ADY51935.1| AAA ATPase [Pedobacter saltans DSM 12145]
Length = 629
Score = 193 bits (490), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 138/481 (28%), Positives = 237/481 (49%), Gaps = 93/481 (19%)
Query: 910 SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMP 969
++L +++ +E P F + A YI S LND Q +A+ +L A++ A++ G P
Sbjct: 152 NRLIKVLTGVEKP-------FFKKEASGYISSR--LNDSQNQAVNSILAAQELAILHGPP 202
Query: 970 GTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI 1028
GTGKT+T+V A+ AL M+ G IL+T+ +N+AVD L +KL + ++ +RIG V +++
Sbjct: 203 GTGKTTTLVEAISALYMQSGKQILVTAPSNTAVDLLTLKLAEKGVNVIRIGNPIRVSQKL 262
Query: 1029 QKHCLSAMNIN------SVEEIKKR----------------------------------- 1047
++ L IN ++++KK+
Sbjct: 263 EELTLD-YKINQHQYNKEIKQLKKQAAEYRNMAHKYKRSFGKLEREQRKALFDEAHKLLK 321
Query: 1048 -------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
L++ +V+ T +G+ N + D+ +D+ ++DEA Q P P++ +
Sbjct: 322 QVEQTESFISEDLLNKAQVITATLVGVNNYAIKDRDYDIVVIDEAAQALEPACWIPVLRS 381
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
K + GDH QLPP V+S EA + G+ +L + HP+A+S L +QYRM + I + +
Sbjct: 382 RKVIFAGDHLQLPPTVKSKEAEKLGLSSTLLEKNMGFHPEAVSLLTTQYRMNKEINDYPS 441
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT 1214
+Y +L +A K+ D+ PV FV+T E + +
Sbjct: 442 IELYESKLHADRS-VATRKLDQKDI---------------PVEFVDTAGCSFDEKINGTS 485
Query: 1215 LNNPVEACLIAKITQELVKNEIEGK-DIGIITPYNSQANLIRHSLS--------VSSVEI 1265
+ NP EA K L++N + K + +I+PY Q L++ + ++ ++I
Sbjct: 486 VYNPEEANFTLKHLTGLLQNHNKAKYSVAVISPYKQQVELLKELIEDWEDLKPFLAQIDI 545
Query: 1266 HTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
+TID +QG+++D + +S RS N N L D R+NVA+TRA+ KL+++G TLS
Sbjct: 546 NTIDSFQGQERDIVYISLTRS--NSENAI-GFLSDIRRMNVAITRARMKLVVIGDSGTLS 602
Query: 1326 K 1326
K
Sbjct: 603 K 603
>gi|167536549|ref|XP_001749946.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771661|gb|EDQ85325.1| predicted protein [Monosiga brevicollis MX1]
Length = 1034
Score = 192 bits (489), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 149/446 (33%), Positives = 223/446 (50%), Gaps = 56/446 (12%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
DP LS++ LND QR A+ L ++ +LI G PGTGKT+T+V + + +G +L
Sbjct: 205 DPELSFV--NPGLNDSQRAAVRFALLSQGISLIHGPPGTGKTTTVVELIHQCVRQGLKVL 262
Query: 993 LTSYTNSAVDNLLIKL-----KSQSIDFVRIGRHEVVH-------------KEIQKHCLS 1034
+ + +N A+DN+ +KL + ++D V + R +V K +QK S
Sbjct: 263 VAAPSNMAIDNIALKLAQTKVQEHALDAV-LERSDVAEVTQGIREDITQAVKGLQKGPRS 321
Query: 1035 AMNINSVE------EIK----KRLDQVKVVAVTCLGITNPL--------LTDKKFDVCIM 1076
A ++ E E++ K + QV A LG T + L + FDV I+
Sbjct: 322 ARRGHAAELKTLRKELREYQHKGITQVLRAAQVVLGTTTTVSASGSLKHLPKEHFDVVIV 381
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR-LSEEHPQA 1135
DEAGQ L+ A K VL GDH+QLPP V S EA + G+ +L R LS +
Sbjct: 382 DEAGQALEVACWSALIHARKMVLAGDHWQLPPTVTSKEAAKQGLAYTLLERVLSVCGGET 441
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
+ L +QYRM I S++ Y RL A+A + L+ + L P
Sbjct: 442 VCMLDTQYRMHACIQGWSSSQFYESRLR------ADASVMGHTLAMLPNVQADELTEV-P 494
Query: 1196 VIFVNTDMLPAYEA--KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
+ FV+T YEA +D + N EA ++ Q+LV+ + +IG+ITPYN Q
Sbjct: 495 LHFVDTSGCSLYEAVGEDDLSKYNTAEAAIVVHHVQQLVELGVPPSEIGVITPYNMQVET 554
Query: 1254 IRHSLS----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
IR L S +E+ ++D +QGR+K+ I +S VRS NP +C L D+ R+NVA+T
Sbjct: 555 IRGRLREAGLSSEIEVLSVDGFQGREKEAICISMVRS--NP-DCNIGFLSDFRRMNVAVT 611
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RA++ +VG RT+S L L +
Sbjct: 612 RARRHCFLVGDSRTISAETHLAALTD 637
>gi|328849166|gb|EGF98352.1| hypothetical protein MELLADRAFT_113623 [Melampsora larici-populina
98AG31]
Length = 1172
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 177/684 (25%), Positives = 295/684 (43%), Gaps = 140/684 (20%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVIGEFD------DQGKCDVGRE--NNFLIVHPDVLVS 454
E R + L +DW +++ D +N++ D DQ R + +I+ P +L++
Sbjct: 263 EIRRLLLCDDWAESLVELNDELNLVSLPDSPPIQLDQELITFSRSEPGHLVILIPSLLIN 322
Query: 455 GTRVAASFSCPRRSVLDERLKCSERSI--SALLGTLLHQIFQAGLMKE------------ 500
T V+ + SCPRR VL++R+K S I + + GT++H++ Q+ L+
Sbjct: 323 TTAVSTAPSCPRRGVLNDRIKSSHNDIGEAVIRGTIVHEVIQSLLLPTEDMISEDGYQQT 382
Query: 501 -------IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW---IIL- 549
P K L+E AR +++ L + + E + ++ +W IL
Sbjct: 383 STHPQALWPMTKILKE-ARKACVRHVGDLLMINQTVDQGFSMVSEHLKELPSWSKKYILQ 441
Query: 550 ------FKDSQD--LNTPTVDFGSDGLK-KLKISEVTDIEEMAWAPKYGLKGMIDASIRV 600
FK +D L P + D + K+ ++ + DIEE W+PKYGLKG IDA++
Sbjct: 442 NNQGKNFKLQKDAHLFDPRSNVRQDEARPKISLTAIHDIEEEIWSPKYGLKGKIDATVEA 501
Query: 601 KIESKRNEINGM-----------ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLK 649
I + ++ + PLE KTG+ PNG +EH AQ +LYTLLMS+RY +
Sbjct: 502 AIIEEPKKVGFFFNKELFTQECNVFPLEIKTGRKPNG---VEHTAQTMLYTLLMSDRYNQ 558
Query: 650 HIDSGLLYYLQSDQTQGV----------MVQRSDLVGLIMRRNEFANDII----KASTTQ 695
++ +GLL+Y ++ V ++ R+ L I +R D++ ++S
Sbjct: 559 NVPAGLLFYTSINEITRVRAVKAELRQLIIARNHLASYIHKRAIDPEDVMLPPTQSSGND 618
Query: 696 QLP---------PML------------------RAYG------------GNKEC------ 710
++P P L R Y G E
Sbjct: 619 EMPSSPHFDGDLPALDIERTLLPEPIDDAQTCSRCYAVDSCMLYRKTIEGEDEIPSRRGL 678
Query: 711 SGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIW----CSRGSGGNHFTG 766
L +++ H+T H +F W+ LI LE +E+ K EIW R + G F
Sbjct: 679 EALQSIYRDKTEHITPNHSTFFTKWESLISLEERELGKFKKEIWELTADKRQAKGRAFAN 738
Query: 767 CLSSIVLDASNEHQKSYRDN---RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKD-MDC 822
D + + R N R+ Y F+ + + + + +PT+ +
Sbjct: 739 MEIDESFDDIRWLKTTKRGNTIHRYTYCFMSSTSSVSSQSPKKSRASLSQVVPTQSLLSG 798
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPG--------RNSSSDAD 874
+ GD V++S E ++LA+A G I ++S + + + + G S D
Sbjct: 799 QMSVGDPVVISIEGEKLAIAKGFICDLSPYRIVIGLDHRVENIGPVSIGSMIPKSYKQDD 858
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFD-SGSVFSQD 933
+RIDKDE+M +R N+ QLF + R ++VDL AP F+ + +F D
Sbjct: 859 QKPKIFYRIDKDELMAGMGRIRDNIAQLFYTHGDYKR-RELVVDLRAPVFEPTPDIFGTD 917
Query: 934 PALSYIWSEKSLNDDQRRAIIKVL 957
P ++ LN+DQR AI KV+
Sbjct: 918 PRFAH------LNEDQRDAICKVI 935
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 98/160 (61%), Gaps = 3/160 (1%)
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
WLK+ L+ R V+FV+TD + A E+ + N VEA L+ +I L++ + +IG+I
Sbjct: 937 WLKDILSDERKVVFVDTDKIDAQESITGSLVQNKVEAQLVVQIVNALLRGGVPASEIGVI 996
Query: 1245 TPYNSQANLIRHSLS-VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
TPY Q L+ + L SVEI T DK QGRDK CI+++ VR++E+ LL DW R
Sbjct: 997 TPYRQQIKLLNYLLEHAPSVEIITADKSQGRDKSCIIMTMVRNNEH--GSVGELLKDWRR 1054
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INV LTR+++KLI++GS +TL +L +N V + I
Sbjct: 1055 INVCLTRSREKLIILGSFKTLKSSEILNEFLNLVEAKKWI 1094
>gi|448474949|ref|ZP_21602714.1| DNA replication factor Dna2 [Halorubrum aidingense JCM 13560]
gi|445816941|gb|EMA66823.1| DNA replication factor Dna2 [Halorubrum aidingense JCM 13560]
Length = 897
Score = 192 bits (489), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 211/427 (49%), Gaps = 29/427 (6%)
Query: 909 SSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGM 968
S + + ++ + P F + D +YI ND Q A+ + A+D ALI G
Sbjct: 494 SERRKDVLFERREPEFRDAADRPADAPDAYI----DNNDAQNAAVELAVDAEDCALIHGP 549
Query: 969 PGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV-RIGRHEVVHKE 1027
PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D V R+G V +
Sbjct: 550 PGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFDEVLRVGTKTGVRAD 609
Query: 1028 IQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
+Q L + + + R V G + ++ + +FDV ++DEA Q T P +
Sbjct: 610 MQDVRLVQRGDPNAKAAELRDAPVVAATTAACG--SRVMRECEFDVALVDEASQLTEPGT 667
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQ 1147
+ A +FVLVGDH QLPP+V++ EN ++ SLF+RL E +P A L QYRM Q
Sbjct: 668 HAAINLADRFVLVGDHEQLPPVVRA----ENDLQTSLFQRLIEAYPDASVMLDRQYRMSQ 723
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
I ++A Y L + E+A + DL L + L V FV+ D
Sbjct: 724 RIQAFASAEFYDGALRPATPEVAGQTL--GDLGVDPADLPDGL--AGGVSFVDPDG---- 775
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHT 1267
+D N EA +A+I V ++ D+G+I P+ +Q I V+ + T
Sbjct: 776 -TRDGN--RNVREAERVAEIVDAYVAAGVDPDDVGVIAPFRAQVAEIGRRTDVT---VDT 829
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKV 1327
+D++QG K+ I+VS V S + D R+NVALTRAKK+L +VG L
Sbjct: 830 VDRFQGSSKEVIVVSLVASG----GLDGPIFEDHRRMNVALTRAKKQLTLVGDADALGSD 885
Query: 1328 PLLKLLI 1334
P + L+
Sbjct: 886 PFYERLL 892
>gi|387790987|ref|YP_006256052.1| ATPase [Solitalea canadensis DSM 3403]
gi|379653820|gb|AFD06876.1| Putative ATPase (DUF699) [Solitalea canadensis DSM 3403]
Length = 642
Score = 192 bits (487), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 141/475 (29%), Positives = 233/475 (49%), Gaps = 89/475 (18%)
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
Y + LN Q A+ +L A D A++ G PGTGKT+T V A+K + ++ +L+T+ +
Sbjct: 176 YTSESQQLNTSQNSAVHNILNANDVAIVHGPPGTGKTTTFVEAIKQVTLKEKQVLVTAPS 235
Query: 998 NSAVDNLLIKLKSQSIDFVRIG-------------------RHEVVH--KEIQKHCLSAM 1036
N+AVD L +L +Q ++ VRIG +HE + K I+K
Sbjct: 236 NTAVDLLCERLSAQGLNVVRIGHPARVGDHLADLVIDNKISQHEYFNDIKSIRKKAEEFR 295
Query: 1037 NIN-------SVEEIKKR-------------------------LDQVKVVAVTCLGITNP 1064
N+ EE ++R L + +V+A T +G N
Sbjct: 296 NMAFKYKRNFGKEESRQRQLLFNEARSLKQEAIKLEDYIVSDILSEAQVIACTLVGSNNS 355
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+L D++F +DEA Q P P+M A + ++ GDH QLPP V+S EA + G+ ++L
Sbjct: 356 VLRDRQFKTVFIDEAAQALEPACWIPIMKAQRVIMAGDHCQLPPTVKSYEAGKQGLNVTL 415
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F ++ E + + L+ QYRM + IME SN Y +L+ + +AN K+
Sbjct: 416 FEKVIERQ-KVDTLLEVQYRMNKAIMEFSNQQFYRGKLTA-FETVANRKL---------- 463
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYE-AKDHQTLNNPVEACLIAKITQELVK------NEIE 1237
+KE N P++F++T E ++ ++ +NP E L+ + ++ NE+
Sbjct: 464 -VKEDEN---PLLFIDTAGCGFNERTENGRSASNPEEGNLLMNYLNDYLQQLTNYDNEVM 519
Query: 1238 GK--DIGIITPYNSQANLIRHSL----SVSS----VEIHTIDKYQGRDKDCILVSFVRSS 1287
K +G+I+PY +Q + + L +++S + +T+D +QG++ D I +S VRS+
Sbjct: 520 DKIRRVGVISPYKAQVSFLTEQLENFETLASLGKKISFNTVDGFQGQECDLIAISLVRSN 579
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
E L D R+NVA+TRAKKKL+++G TLS P ++ V S
Sbjct: 580 EKNE---IGFLADTRRMNVAITRAKKKLLIIGDSATLSSHPFYASFLDHVQNNSA 631
>gi|406836754|ref|ZP_11096348.1| AAA ATPase [Schlesneria paludicola DSM 18645]
Length = 628
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 264/565 (46%), Gaps = 99/565 (17%)
Query: 824 LRSGDYVILSTE-SDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
LRSG V+LS + +D G++T R ++V S + ++ D L+ R
Sbjct: 75 LRSGMPVVLSVQQADNRTGWRGIVTWRDRDSIAVVLSD-------SPETEVDRPLY---R 124
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRM--IVDLEAPRFDSGSVFSQDPALSYI- 939
+D M + V R Q S LRR+ I A R + + P +
Sbjct: 125 LD----MAADDVARER---------QRSALRRIGEIDRGRALRLKQAVLGKEPPEFDAVP 171
Query: 940 -WSE-KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
WS L++ Q+ A+ L+A+ A+I G PGTGKT+T+V ++ + RG +L + +
Sbjct: 172 DWSPLAQLDESQQAAVSHALSAQHLAVIHGPPGTGKTTTVVELIRQAVRRGEKVLACAAS 231
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN-------------------- 1037
N AVDNLL +L +RIG V E+++H L M
Sbjct: 232 NLAVDNLLERLVIARERVIRIGHPARVLPELREHTLDVMVESHPDLKLAREWTKEAWSLR 291
Query: 1038 --------------------------INSVEEIKKRL-----DQVKVVAVTCLGITNPLL 1066
+ E++ RL D +VV T G+ + +L
Sbjct: 292 RQAGKFTRTAPPPGARRDARDEAKRLLRDARELESRLVEYLLDSAQVVCATLTGLNDEIL 351
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+++FD+ ++DEA Q+T P PL+ + + VL GDH QLPP + S +AR G ++S+
Sbjct: 352 GERQFDLVVIDEAAQSTEPPCWIPLLRSKRLVLAGDHCQLPPTIISHDARREGFQVSMME 411
Query: 1127 RLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL I+ L +QYRM IM+ S+ Y L + A+ +++DL P
Sbjct: 412 RLVSRWGDLIARRLDTQYRMHDRIMQFSSDEFYDSSLISANSVRAH---RLADL----PH 464
Query: 1186 LKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ + + F +T D + E + ++ NP EA + EL+ + +I
Sbjct: 465 VTDGELTQSSIRFFDTAGSDCVEQAEV-EGESRTNPGEAEFVVIKVNELLAAGVRPTEIA 523
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL--LGD 1300
+ITPY++QA L+R ++ + VEI T+D +QGR+K+ +++S VRS N L L D
Sbjct: 524 VITPYSAQARLLRTLIAEAGVEIDTVDGFQGREKEAVVISLVRS-----NAKGELGFLTD 578
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLS 1325
R+NVALTRA++ L++ G TL+
Sbjct: 579 TRRMNVALTRARRHLMVFGDSATLA 603
>gi|336397671|ref|ZP_08578471.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
gi|336067407|gb|EGN56041.1| AAA ATPase [Prevotella multisaccharivorax DSM 17128]
Length = 642
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 226/470 (48%), Gaps = 93/470 (19%)
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
+S+ W LN+ Q RA+ +VL AKD A++ G PGTGKT+T+V A+ LMR + +L+ +
Sbjct: 188 MSFPW----LNETQERAVNEVLRAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVLVCA 243
Query: 996 YTNSAVDNLLIKLKSQSIDFVRIGRHEVVH---------KEIQKH----CLSAMNINSVE 1042
+N AVD + KL + I+ +RIG V+ + + H L A+ ++
Sbjct: 244 QSNMAVDWICEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHPDYSQLWAIR-KAIR 302
Query: 1043 EIKKR------------------------------LDQVKVVAVTCLGITNPLLTDKKFD 1072
E+++R + +V+A T +G N LL +KF
Sbjct: 303 ELRRRKKGRDDNFHQKLERLKSRATELEIRINAELFGEARVIASTLVGSANRLLEGQKFG 362
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q P+ S+ +L GDH QLPP V+S A + G+ +L R+ E
Sbjct: 363 TLFIDEAAQALEAACWIPIRRVSRVILAGDHCQLPPTVKSIAALKGGLGKTLMERIVENK 422
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
P+ ++ L QYRM + IM S+ YG R+ + + I LN
Sbjct: 423 PECVTLLGVQYRMNEEIMRFSSDWFYGGRVRTAPEILQRKSI---------------LNL 467
Query: 1193 CRPVIFVNT---DMLPAYEAKDHQTLN------NPVEACL--------IAKITQELVKNE 1235
RP+++++T +M P + Q + N EA L KI +E + +
Sbjct: 468 DRPILWLDTGQIEMGPDEPSNKEQFIGESFGRVNKGEAELTLSSLQAYFTKIGKERILD- 526
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSS 1287
E D+G+I+PY +Q +R + + ++T+D +QG+++D IL+S VR++
Sbjct: 527 -ERIDVGVISPYRAQVQYLRSLVRKREFFKPYRRLITVNTVDGFQGQERDIILISMVRAN 585
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
E N L D R+NVA+TRA+ KLI++G +TL++ P K L V
Sbjct: 586 E---NGEIGFLHDLRRMNVAITRARMKLIILGDVQTLARHPFYKKLWEYV 632
>gi|109105146|ref|XP_001117732.1| PREDICTED: DNA-binding protein SMUBP-2-like [Macaca mulatta]
Length = 920
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKTLIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SSASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLT-AHPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTASCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|448534652|ref|ZP_21621810.1| DNA replication factor Dna2 [Halorubrum hochstenium ATCC 700873]
gi|445704263|gb|ELZ56180.1| DNA replication factor Dna2 [Halorubrum hochstenium ATCC 700873]
Length = 906
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 249/984 (25%), Positives = 408/984 (41%), Gaps = 166/984 (16%)
Query: 401 SGEERAVHLWEDWFHTV--IAPGDTVNVIGEFDDQGKCDVG---RENNFLIVHPDVLVSG 455
+G+ V +W W T G + V +D+ + + G + +++++ PD LV
Sbjct: 36 AGDPVDVTVWGKWTETAEHAETGMELLVTDAEEDEYRGETGYATTDESWVVLEPDFLVDV 95
Query: 456 TRVAASFSCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVL 515
T + + CPR L+ +L + + GT++H++F L+
Sbjct: 96 TGIRSWVQCPRMYYLN-KLSGIPLNYPVVKGTIVHEVF-----------------GDLLR 137
Query: 516 QKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKKLKISE 575
++E+ A V+E + L L + + + G L +
Sbjct: 138 GVDLEASIADRVDEAGLELGL-------LGYEREEVEDEVRRNAAAVEGWLAQGTLSDED 190
Query: 576 VTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQ 635
E +P +GLKG DA R P+E KTGK + + Q
Sbjct: 191 TWRSEYTLISPTFGLKGRADALRRGT-------------PVELKTGKNTKREPRFHDKVQ 237
Query: 636 VILYTLLMSERYLKHIDSGLLYY-----LQSDQTQGVM-------VQRSDLVGLIMRRNE 683
Y L++ ER + D G L Y L ++ G + V R L ++ RN
Sbjct: 238 AACYALMLDERGVDP-DIGTLLYTKNTALDRNEESGDLAPAKEFTVGRGFLEFVVRERNA 296
Query: 684 FANDIIKA-STTQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLE 742
A +A + + P + Y + CS Y C + +D E
Sbjct: 297 LAAMEWRALNDPGERPTVPTGYEADATCS----------YCFEQDACMVVSG---RLDQE 343
Query: 743 AKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNL 802
+K Q+ R ++F ++ E ++++ + R ++ +P
Sbjct: 344 SKAGQIGTPVPDAER----DYFDRFYVAL----EEERRETHAEYRKLWE------QTPEE 389
Query: 803 NASDGDSLIG-----------------AAIPTKDMDCTLRSGDYVILSTESDRLAVAS-- 843
A+D +LIG A P + + LR GD V L+ + D ++ +
Sbjct: 390 RAADDRALIGLEPAGQAEIDDARWELRARKPGEAV-SKLREGD-VALANDGDPVSGHAEL 447
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G I E+ V V +P+ E+ R+D + SV R +L L
Sbjct: 448 GRIVELGGDEVVVEADEPV----------------ELRRLDV--YPSEISVDR-SLTALH 488
Query: 904 LQSAQSSQLRR-MIVDLEAPRFD------SGSVFSQDPAL--SYIWSEKSLNDDQRRAII 954
+ S+ R+ ++ P F +GS DP +YI + ND Q A+
Sbjct: 489 DAVLKGSESRKDVLFGRREPAFRDPADRPAGSPGGGDPDAPDAYIGN----NDAQNEAVE 544
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
+ A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN AVDN L L+ Q D
Sbjct: 545 LAVDAEDCALIHGPPGTGKTYTIARTIRALVAEGNRVLLSAFTNRAVDNALEALRDQGFD 604
Query: 1015 FV-RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
V R+G V +++ L + + + R V G + ++ + +FDV
Sbjct: 605 EVLRVGTETGVRDDMRDVRLVQRGDPNAKAAELRDAPVVAATTAACG--SRVMRECEFDV 662
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
++DEA Q T P + + A +FVLVGDH QLPP+V++ EN + SLF RL + +P
Sbjct: 663 ALVDEASQLTEPGTHAAINLADRFVLVGDHEQLPPVVRA----ENDLSTSLFERLIDAYP 718
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP- 1192
+A L QYRM Q I ++A Y L + E+A + +DL + EAL P
Sbjct: 719 EASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTL--ADLGVDA----EALAPE 772
Query: 1193 -CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
V FV+ D + N EA +A + V ++ DIG+I P+ +Q
Sbjct: 773 LTGGVGFVDPD-------GERDGNRNVREAERVAAVVDAYVAAGVDPDDIGVIAPFRAQV 825
Query: 1252 NLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
I V+ + T+D++QG K+ I+VS V + + + D R+NVALTRA
Sbjct: 826 AEIGRRTDVT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFEDHRRVNVALTRA 878
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLIN 1335
KK+L +VG L P ++
Sbjct: 879 KKQLTIVGDADALGSDPFYARMLE 902
>gi|222480116|ref|YP_002566353.1| DNA replication factor Dna2 [Halorubrum lacusprofundi ATCC 49239]
gi|222453018|gb|ACM57283.1| DNA replication factor Dna2 [Halorubrum lacusprofundi ATCC 49239]
Length = 901
Score = 191 bits (484), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 162/516 (31%), Positives = 249/516 (48%), Gaps = 52/516 (10%)
Query: 824 LRSGDYVILSTESDRLAVAS--GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW 881
LR GD V L+++ D + G IT +S V V +P+ E+
Sbjct: 430 LREGD-VALASDGDPVTGHGELGRITALSEDEVVVETDEPV----------------ELR 472
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRR-MIVDLEAPRFDSGSVFSQDPALSYIW 940
R+D + SV R +L L + S+ R+ ++ P F + D +YI
Sbjct: 473 RLDV--YPSEISVDR-SLTALHDAILKGSEARKDVLFGRREPEFRDAADRPADAPEAYID 529
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ S N+ A+ + A+D ALI G PGTGKT T+ ++AL+ G +LL+++TN A
Sbjct: 530 NNASQNE----AVSLAVDAEDGALIHGPPGTGKTYTIARTIRALVEEGNRVLLSAFTNRA 585
Query: 1001 VDNLLIKLKSQSIDFV-RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCL 1059
VDN L L+ Q D V R+G V ++Q L + + + R V
Sbjct: 586 VDNALEALRDQGFDEVLRVGSETGVRDDMQDVRLVQRGDPNAKAAELRDAPVVAATTAAC 645
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G + +L + +FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN
Sbjct: 646 G--SRVLRECEFDVALVDEASQLTEPGTHAAINRADRFVLVGDHEQLPPVVRA----END 699
Query: 1120 MEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
++ SLF+RL EE+P A L QYRM Q I ++A Y L + E+A ++ DL
Sbjct: 700 LQTSLFQRLIEEYPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTLR--DL 757
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
L + L V F + D +D N EA +A+I V ++
Sbjct: 758 GVDPADLPDGL--AGGVDFDDPDG-----TRDGN--RNVREAERVAEIVDAYVAAGVDPD 808
Query: 1240 DIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
DIG+I P+ +Q I +V+ + T+D++QG K+ I+VS V + + +
Sbjct: 809 DIGVIAPFRAQVAEIGRRTAVT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFE 861
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
D R+NVALTRAKK+L +VG L+ P ++
Sbjct: 862 DHRRMNVALTRAKKQLTLVGDDDALASEPFYARMLE 897
>gi|387542852|gb|AFJ72053.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 991
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLT-AHPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|383418089|gb|AFH32258.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 991
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLT-AHPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|355751887|gb|EHH56007.1| DNA-binding protein SMUBP-2 [Macaca fascicularis]
Length = 921
Score = 190 bits (482), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLT-AHPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|380791299|gb|AFE67525.1| DNA-binding protein SMUBP-2, partial [Macaca mulatta]
Length = 784
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 168/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTA-HPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|108758058|ref|YP_634107.1| DNA helicase [Myxococcus xanthus DK 1622]
gi|108461938|gb|ABF87123.1| putative DNA helicase [Myxococcus xanthus DK 1622]
Length = 639
Score = 190 bits (482), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 157/594 (26%), Positives = 265/594 (44%), Gaps = 106/594 (17%)
Query: 815 IPTKDMDCTLRSGDYV-ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDA 873
+PT+ L +GD V +L ++ A LI+ + + ++F +
Sbjct: 73 LPTR-----LHNGDLVAVLPRRAEVKEPARALISRATATRIQLAFDR-----------SP 116
Query: 874 DSLLHE-VWRIDKDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFS 931
+HE + R+D ++ +R L ++ L R +++ E PRFD F
Sbjct: 117 PPYVHEGLLRLDVVPNDVTYDRLRAGLQRIKALDKGAERHKREVVLGNEPPRFDKPREFE 176
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ LN +Q+ A + L A+D+ L+ G PGTGK++ + + G +
Sbjct: 177 ---------PTRPLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEVAAQAVADGKRL 227
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS----------------- 1034
L T+ +N+AVD+LL + + +R+G V +Q+H L
Sbjct: 228 LCTAASNAAVDHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRAVSRDLFD 287
Query: 1035 ----------------------AMNINSVEEIKKRLDQVK---------------VVAVT 1057
A S E K LD+ + V+ VT
Sbjct: 288 EAFSLLGYARRQRNQGRSRERFANARASTTEAKGMLDEARALERKAVKSVLANADVICVT 347
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
+ + +L+ ++FD+ ++DEA Q T P++L + A + +L GD QLPP V S EA +
Sbjct: 348 LSSLDSGVLSGQQFDLALLDEATQATEPLALLGFLRAPRVILAGDPQQLPPTVLSQEAAK 407
Query: 1118 NGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
G+ +SLF RL ++H + + L+ QYRM IM+ + +YG L A +
Sbjct: 408 AGLGVSLFERLLKDHGEGVKRMLREQYRMNARIMDFPSREMYGGEL--------RAHPSI 459
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ------TLNNPVEACLIAKITQE 1230
+D + + A PV++++T A + D + +L NP EA L+ +
Sbjct: 460 ADRTLDAVLTPGADVDAPPVLYLDT----AGKGFDEEVEPTTRSLFNPGEAGLVEARVRA 515
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKDCILVSFVRSSE 1288
L+ + +++ +ITPY++QA+ +R + S VE+ T+D +QGR+KD I+VS RS+
Sbjct: 516 LLAAGLAPRELAVITPYSAQAHQLRERIEALSPEVEVDTVDAFQGREKDAIIVSLTRSNS 575
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
L D R+NVALTRA++ L +VG TLS P + G
Sbjct: 576 ---EGQLGFLTDLRRMNVALTRARRHLFVVGDSATLSGHPFYARFVEGTQTHGG 626
>gi|405355805|ref|ZP_11024917.1| hypothetical protein A176_1051 [Chondromyces apiculatus DSM 436]
gi|397091077|gb|EJJ21904.1| hypothetical protein A176_1051 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 639
Score = 189 bits (481), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 145/494 (29%), Positives = 227/494 (45%), Gaps = 89/494 (18%)
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTG 972
R +++ E PRFD F +P + LN +Q+ A + L ++D+ L+ G PGTG
Sbjct: 158 REVLLGNEPPRFDKPREF--EPT-------RPLNPEQQDATARALASEDFFLVHGPPGTG 208
Query: 973 KTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
K++ + + G +L T+ +N+AVD+LL + + VR+G V +Q+H
Sbjct: 209 KSTVLAEIAAQAVADGQRLLCTAASNAAVDHLLDLCLDKGLRAVRVGHPARVAARLQEHT 268
Query: 1033 LS---------------------------------------AMNINSVEEIKKRLDQVK- 1052
L A S E K LD+ +
Sbjct: 269 LDIVVESHPDRVVSRELFDEAYSLLGYARRQRNQGRSRERFANARASTSEAKGMLDEARA 328
Query: 1053 --------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
V+ VT + + +L+ +KFD+ ++DEA Q T P++L + A + +
Sbjct: 329 LERKAVKAVLANADVICVTLSSLDSGVLSGEKFDLALLDEATQATEPLALLGFLRAPRVI 388
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALI 1157
L GD QLPP V S EA + G+ +SLF RL ++H + + L+ QYRM IM + +
Sbjct: 389 LAGDPQQLPPTVLSQEAAKAGLGVSLFERLLKDHGEGVKRMLREQYRMNARIMAFPSREM 448
Query: 1158 YGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP-----CRPVIFVNTDMLPAYEAKDH 1212
Y L A V+D + L E L P PV+F++T E +
Sbjct: 449 YAGEL--------RAHPSVADRA-----LAEVLTPGADVDAPPVLFLDTAGKGFEEEVEP 495
Query: 1213 QT--LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTI 1268
T L NP EA L+ + L+ + +++ +ITPY++QA+ +R + S VE+ T+
Sbjct: 496 TTRSLFNPGEAGLVEARVRALLAAGLSPRELAVITPYSAQAHRLRERIEALSPDVEVDTV 555
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
D +QGR+KD I+VS RS+ L D R+NVALTRA++ L +VG TLS
Sbjct: 556 DAFQGREKDAIIVSLTRSNG---EGQLGFLNDLRRMNVALTRARRHLFVVGDSATLSGHA 612
Query: 1329 LLKLLINKVGEQSG 1342
+ E G
Sbjct: 613 FYARFVEGTQEHGG 626
>gi|355566218|gb|EHH22597.1| DNA-binding protein SMUBP-2 [Macaca mulatta]
Length = 921
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 282/585 (48%), Gaps = 94/585 (16%)
Query: 813 AAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPGR 867
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 76 AALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRE 131
Query: 868 NSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDS 926
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 132 NS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP---- 176
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S S+ L++ + SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 -SPASEIHPLTFFNT--SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVK 233
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSV 1041
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ + V
Sbjct: 234 QGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVAWSDSAQIV 293
Query: 1042 EEIKKRLDQV------------------------------------------KVVAVTCL 1059
+I+K +DQV VV T
Sbjct: 294 ADIRKDIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNT 353
Query: 1060 GITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP V S +A
Sbjct: 354 GASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKA 413
Query: 1116 RENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
G+ +SL RL+EE+ +A+ L QYRM Q IM ++ +Y +L+ +A +
Sbjct: 414 ALAGLSLSLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLT-AHPSVAGHLL 472
Query: 1175 KVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELV 1232
+ DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 473 R--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALV 526
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +D+ +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 527 DAGVPARDVAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN--- 583
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|406858745|gb|EKD11835.1| DNA-binding protein SMUBP-2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 690
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 173/622 (27%), Positives = 276/622 (44%), Gaps = 114/622 (18%)
Query: 813 AAIPTKDMDCTL-----RSGDYVILSTESDRLAV-----------ASGLITEISRFHVSV 856
A+ +KD D L R+GD V++S + A A G+IT+++R V V
Sbjct: 77 ASKKSKDGDGELPEHGIRTGDIVVVSEQPAGSAKKREVREMEEKGARGVITKVTRGAVWV 136
Query: 857 SFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMI 916
+ + D +W + +T + NL+ L ++ + S +++
Sbjct: 137 AL---------DGEEDDVPGAKRMWIVKLANDVT-YKRQTLNLL-LKMKPDEYSGFVQVL 185
Query: 917 VDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTST 976
L +P SG + D W + SLND Q+ AI L +++ ALI G PGTGKT T
Sbjct: 186 FGLGSPSPVSGDLSGGDRG-RLEWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHT 244
Query: 977 MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
++ + +L + +L+ +N +VDN++ +L I VR+G + + H L +
Sbjct: 245 LIELILQMLKQNLRVLVCGPSNISVDNIVERLAPHKIPIVRLGHPARLLPSVLNHSLDVL 304
Query: 1037 NINS-----VEEIKKRLDQ----------------------------------------- 1050
S V++++K +D
Sbjct: 305 TQTSEAAAIVKDVRKEMDTKQASIKKTKSGRERKAIYGDLKELRKEFRERERKCIGSLIK 364
Query: 1051 -VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
KVV T G D+ FDV I+DEA Q PL+ ASK VL GDH QLPP
Sbjct: 365 GSKVVLATLHGAGGFQTKDEVFDVVIIDEASQALEAQCWVPLLRASKVVLAGDHLQLPPT 424
Query: 1110 VQS------------TEARENGM--EISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSN 1154
+++ TE GM E +LF RL H AI L +QYRM + IM +
Sbjct: 425 IKTLNSKTKKSKAVETEGIIKGMTLETTLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPS 484
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT 1214
+Y +L IA +K L + E + +P+IF +T E + +
Sbjct: 485 DELYESKL------IAADGVKTRILKELPYEVAETEDTTKPLIFYDTQGGDFPEKNEEEE 538
Query: 1215 LN-------------NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--S 1259
++ N +EA L+ + Q LV +E +DI +ITPYN+Q LI+ S+ +
Sbjct: 539 VDKKAGKGMMGDSKSNEMEAALVRQHVQSLVDAGVEPEDIAVITPYNAQLALIKSSIKEA 598
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+E+ ++D +QGR+K+ ++VS VRS+ + LG+ R+NVA+TR K+ L+++G
Sbjct: 599 FPGIELGSVDGFQGREKEAVIVSLVRSNSDKE---VGFLGEKRRLNVAMTRPKRSLVVIG 655
Query: 1320 SCRTLSKVPLLKLLINKVGEQS 1341
TL LK + + E S
Sbjct: 656 DSETLQGNKFLKRWMEFLEEHS 677
>gi|392864335|gb|EAS34834.2| DNA helicase [Coccidioides immitis RS]
Length = 738
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 268/585 (45%), Gaps = 103/585 (17%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T+I V V+F + R PG+ A L ++W + +T + M+ +V++
Sbjct: 156 GVVTKIGERSVWVAFDERGR-PGKQDDDGAAGLWGQKLWLVKLANDIT-YRRMKQTMVRM 213
Query: 903 -FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ ++ S R++ P S +S +L +I + SLND Q+ AI L +++
Sbjct: 214 EKMAESEHSSFMRVLFGHTTP---SPPDWSSASSLDFI--DPSLNDSQKEAIRFALASRE 268
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
ALI G PGTGKT T++ + LL R IL+ +N +VDN++ +L I VRIG
Sbjct: 269 IALIHGPPGTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHP 328
Query: 1022 EVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ-------------------------- 1050
+ + H L A+ S V+++++ +D+
Sbjct: 329 ARLLSSVVDHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRK 388
Query: 1051 ----------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
KVV T G L ++KFDV ++DEA Q PL+ A
Sbjct: 389 EFREREARCVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSA 448
Query: 1095 SKFVLVGDHYQLPPLVQST---------------EARENG-------------MEISLFR 1126
SK +L GDH QLPP ++ST A ++G +E +LF
Sbjct: 449 SKAILAGDHLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLSITSLETTLFD 508
Query: 1127 RLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H P L +QYRM + IM + +Y +L IA +K L
Sbjct: 509 RLLSLHGPTIKRMLTTQYRMHEKIMSFPSCELYESKL------IAADHVKARLLKDLPCD 562
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTL------NNPVEACLIAKITQELVKNEIEGK 1239
+++ + C P++F +T E + L +N +EA ++A+ Q L+ + +
Sbjct: 563 IQDTDDTCEPLVFYDTQGGEFPERIEDGELLLADSKSNDLEAAVVARHVQNLIAAGLREE 622
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DI +ITPYN+Q L+ L +EI ++D +QGR+K+ ++VS VRS+
Sbjct: 623 DIAVITPYNAQVALLAQLLRERHPGLEIGSVDGFQGREKEAVVVSLVRSNAERE---VGF 679
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLLINKVGEQS 1341
LG+ R+NVA+TR +K L + G T+S+ P LK ++ + E S
Sbjct: 680 LGEKRRLNVAMTRPRKHLCVCGDSETISRGSPFLKRWMDYLEENS 724
>gi|325294544|ref|YP_004281058.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064992|gb|ADY72999.1| DNA helicase [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 721
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 165/296 (55%), Gaps = 11/296 (3%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T + + LL FDV ++DE Q P +L P+M A KF + GDH QLPP V S
Sbjct: 430 VVISTNSMVKSELLEGFHFDVAVIDEGSQQVEPSTLIPIMKADKFYIAGDHKQLPPTVTS 489
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EA+E +E +LF RL H + S LQ QYRM + IME N Y +L ++ + N
Sbjct: 490 EEAKE--LEKTLFERLINSHSELSSMLQVQYRMNEKIMEFPNREFYEGKLRA-AEIVKNH 546
Query: 1173 KIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDH--QTLNNPVEACLIAKITQE 1230
+ DL + KE LNP P+ F++T + AYE + + N EA + I +E
Sbjct: 547 TLADFDLKEPEKF-KEILNPSEPLAFLDTSDINAYEFQPEGSTSYENYEEAKIAISIAEE 605
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSE 1288
L K ++ KDIGIITPY +Q LI+ L VE++++D +QGR+K+ I++SFVRS++
Sbjct: 606 LCKIGVDKKDIGIITPYAAQVKLIKQLLLEKDLKVEVNSVDGFQGREKEVIIISFVRSND 665
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
L D R+NVA+TR K+KLI +G+ TLS + K I + E+ L
Sbjct: 666 ---EGEIGFLKDLRRLNVAITRPKRKLIAIGNAETLSNHEVYKRFIENIKEKGTFL 718
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K LN Q A+ + L AKD+ LI G PGTGKTST+ + L+ RG +L T+ +N A
Sbjct: 237 DKRLNKTQINAVKQALGAKDFYLIHGPPGTGKTSTITELIVQLVKRGNKVLATADSNIAA 296
Query: 1002 DNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAVTC 1058
DN+L+ L K + VRIG V +E++K + + ++IK+ ++V+ +
Sbjct: 297 DNILLNLSKYSELKLVRIGHPARVLEELEKFSIYTLYEEHEKTQKIKEGWERVRELIEKR 356
Query: 1059 LGITNPL 1065
T PL
Sbjct: 357 EQFTKPL 363
>gi|118600271|gb|AAH25299.1| IGHMBP2 protein [Homo sapiens]
Length = 868
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 280/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|375146785|ref|YP_005009226.1| ATPase AAA [Niastella koreensis GR20-10]
gi|361060831|gb|AEV99822.1| ATPase AAA [Niastella koreensis GR20-10]
Length = 633
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 215/451 (47%), Gaps = 87/451 (19%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVD 1002
+LN Q+ A+ K+L A D A++ G PGTGKT+T+V A+KA++ + IL+ + +N+AVD
Sbjct: 177 NLNSSQQAAVNKILQANDLAIVHGPPGTGKTTTLVQAIKAMIKKDNQQILVVAPSNTAVD 236
Query: 1003 NLLIKLKSQSIDFVRIG------------------------------------------- 1019
L KL + ++ +R+G
Sbjct: 237 LLSEKLSDEGLNVLRVGNPARVSERLLSLTLDYKMADHPHTKEIKRLKKQASAFMDMAHK 296
Query: 1020 --RHEVVHKEIQKHCLSAMNINSVEE--------IKKRLDQVKVVAVTCLGITNPLLTDK 1069
RH + Q+ L A N ++E IK + + +V+ T LG + + +
Sbjct: 297 YKRHFGKAERDQRKALFAEARNIMKEVDNSEQYIIKDLVAKAQVITATLLGSNHYTVRNL 356
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF+ ++DEAGQ P P++ A K VL GDH QLPP V+S EA +NG+ +L +
Sbjct: 357 KFNTVVIDEAGQALEPACWVPILKAQKVVLAGDHCQLPPTVKSAEAAQNGLATTLLEKCV 416
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
HP+A L+ QYRM + IM S++ Y DRL A+A + L S
Sbjct: 417 ALHPEAEVLLEEQYRMHEMIMGYSSSTFYDDRLK------AHASVARHVLFSND------ 464
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN------EIEGKDIGI 1243
P++FV+T E + + NP EA + + +LV + I I
Sbjct: 465 ----NPLVFVDTAGCGFDEKTEQTSTYNPEEAAFLFRHLTQLVSSLDSHYKPENFPSIAI 520
Query: 1244 ITPYNSQANLIRHSLSVS--------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I+PY Q + ++ S + I+TID +QG+++D + +S RS NP N
Sbjct: 521 ISPYKQQIDTLKQQFLSSPALQAYGHKIAINTIDSFQGQERDIVYISMTRS--NPDNRI- 577
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L D R+NVA+TRA+KKL+++G TLS+
Sbjct: 578 GFLSDIRRMNVAMTRARKKLVVIGDSATLSQ 608
>gi|119392094|ref|NP_002171.2| DNA-binding protein SMUBP-2 [Homo sapiens]
gi|317373494|sp|P38935.3|SMBP2_HUMAN RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName: Full=Glial
factor 1; Short=GF-1; AltName: Full=Immunoglobulin
mu-binding protein 2
gi|908917|gb|AAA70430.1| DNA helicase [Homo sapiens]
Length = 993
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 280/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|448465899|ref|ZP_21598947.1| DNA replication factor Dna2 [Halorubrum kocurii JCM 14978]
gi|445814837|gb|EMA64794.1| DNA replication factor Dna2 [Halorubrum kocurii JCM 14978]
Length = 898
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 199/391 (50%), Gaps = 25/391 (6%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLL 1005
ND Q A+ + A+D ALI G PGTGKT T+ A++AL+ G +LL+++TN AVDN L
Sbjct: 528 NDAQNEAVQLAVDAEDCALIHGPPGTGKTYTIARAIRALVAEGNRVLLSAFTNRAVDNAL 587
Query: 1006 IKLKSQSIDFV-RIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L+ Q D V R+G V ++Q L + + + R V G +
Sbjct: 588 EALRDQGFDDVLRVGTKTGVRGDMQDVRLVQRGDPNAKAAELRDAPVVAATTAACG--SR 645
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+L + +FDV ++DEA Q T P + + A +FVLVGDH QLPP+V++ EN ++ SL
Sbjct: 646 VLRECEFDVALVDEASQLTEPGTHAAINRADRFVLVGDHEQLPPVVRA----ENDLQTSL 701
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F+RL E +P A L QYRM Q I ++A Y L + E+A ++ DL
Sbjct: 702 FQRLIEAYPDASVMLDRQYRMSQRIQAFASAEFYDGALRPATPEVAGQTLR--DLRVDPA 759
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
L E L + ++D N EA +A++ + ++ D+G+I
Sbjct: 760 DLPEGLAG-------GVSSVDPGGSRDGN--RNVREAERVAEVVDAYLAAGVDPDDVGVI 810
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
P+ +Q I +V+ + T+D++QG K+ I+VS V + + + D R+
Sbjct: 811 APFRAQVAEIGRRTAVT---VDTVDRFQGSSKEVIVVSLVATG----DLDGPIFEDHRRM 863
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
NVALTRAKK+L +VG L P L++
Sbjct: 864 NVALTRAKKQLTLVGDAGALGSDPFYARLLD 894
>gi|303313437|ref|XP_003066730.1| hypothetical protein CPC735_059550 [Coccidioides posadasii C735 delta
SOWgp]
gi|240106392|gb|EER24585.1| hypothetical protein CPC735_059550 [Coccidioides posadasii C735 delta
SOWgp]
Length = 738
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 164/585 (28%), Positives = 268/585 (45%), Gaps = 103/585 (17%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T+I V V+F + R PG+ A L ++W + +T + M+ +V++
Sbjct: 156 GVVTKIGERSVWVAFDERGR-PGKQDDEGAAGLWGQKLWLVKLANDIT-YRRMKQTMVRM 213
Query: 903 -FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ ++ S R++ P S +S +L +I + SLND Q+ AI L +++
Sbjct: 214 EKMAESEHSSFMRVLFGHTTP---SPPDWSSASSLDFI--DPSLNDSQKEAIRFALASRE 268
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
ALI G PGTGKT T++ + LL R IL+ +N +VDN++ +L I VRIG
Sbjct: 269 IALIHGPPGTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHP 328
Query: 1022 EVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ-------------------------- 1050
+ + H L A+ S V+++++ +D+
Sbjct: 329 ARLLSSVVDHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRK 388
Query: 1051 ----------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
KVV T G L ++KFDV ++DEA Q PL+ A
Sbjct: 389 EFREREARCVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSA 448
Query: 1095 SKFVLVGDHYQLPPLVQST---------------EARENG-------------MEISLFR 1126
SK +L GDH QLPP ++ST A ++G +E +LF
Sbjct: 449 SKAILAGDHLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLPITSLETTLFD 508
Query: 1127 RLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H P L +QYRM + IM + +Y +L IA +K L
Sbjct: 509 RLLSLHGPTIKRMLTTQYRMHEKIMSFPSCELYESKL------IAADHVKARLLKDLPCD 562
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTL------NNPVEACLIAKITQELVKNEIEGK 1239
+++ + C P++F +T E + L +N +EA ++A+ Q L+ + +
Sbjct: 563 IQDTDDTCEPLVFYDTQGGEFPERIEDGELLLADSKSNGLEAAIVARHVQNLIAAGLREE 622
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DI +ITPYN+Q L+ L +EI ++D +QGR+K+ ++VS VRS+
Sbjct: 623 DIAVITPYNAQVALLAQLLRERHPGLEIGSVDGFQGREKEAVVVSLVRSNAERE---VGF 679
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLLINKVGEQS 1341
LG+ R+NVA+TR ++ L + G T+S+ P LK ++ + E S
Sbjct: 680 LGEKRRLNVAMTRPRRHLCVCGDSETISRGSPFLKRWMDYLEENS 724
>gi|328875613|gb|EGG23977.1| AN1-type zinc finger-containing protein [Dictyostelium fasciculatum]
Length = 1035
Score = 188 bits (477), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 166/593 (27%), Positives = 273/593 (46%), Gaps = 107/593 (18%)
Query: 827 GDYVILSTESDR--LAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
GD V + T + +++SG++ + RF +++SF + +D +S V+ ID
Sbjct: 105 GDIVGIRTTKSKPGQSLSSGVVYRVDRFRITISFDEY----DEELMADWESF---VFAID 157
Query: 885 KDEIMTSFSVMRYNLVQLFLQS-AQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEK 943
K ++ MR L L A S I + + R +P S ++
Sbjct: 158 KLSNDVTYRKMREALESLRSDRIASGSGGGTTITNQVSSRILDVVFNGAEPHQSATYTSS 217
Query: 944 S-----------------LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S LN Q +A+ L + D ALI G PGTGKT+T+V + +
Sbjct: 218 SENNNNNNNTTLKPITSKLNQTQIKAVEFALGSSDIALIHGPPGTGKTTTVVEFIVQCVR 277
Query: 987 RGASILLTSYTNSAVDNLLIKLKS-QSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
RG +L + +N AVDN+L KL + I+ R+G + + + K+ L NS
Sbjct: 278 RGQRVLACAPSNLAVDNMLEKLIAVNGINPTRVGHPARIMEGLSKYTLDHKTKNSEEAEV 337
Query: 1041 -------------------------------VEEIKKRL--------DQV----KVVAVT 1057
+++++K L +QV KVV T
Sbjct: 338 VRGLRKEIADLLKETKSKGTDRDRRRVIGSTIKDLRKDLRSREVVLVEQVIKNSKVVLST 397
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
C G + L FD+ ++DEAGQ + + VL GDH QLPP + S +A +
Sbjct: 398 CTGAADYSLRHHDFDIVVIDEAGQALEASCWIAIRKGRRLVLAGDHQQLPPTIHSDDAAK 457
Query: 1118 NGMEISLFRRLSEEHPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
+G+ ++LF RL + IS L S QYRM Q IM S+ Y + +DE
Sbjct: 458 DGLSVTLFERLIRIYGDKISRLLSIQYRMNQSIMNWSSKEFYNSEMH--ADE-------- 507
Query: 1177 SDLSSCSPWLKEALNPCR---------PVIFVNT---DMLPAYEAKD--HQTLNNPVEAC 1222
S + L + LNP + P++ ++T DM + E + Q+ +N EA
Sbjct: 508 ----SVASHLLQGLNPEKIKTTPTTTCPIVLIDTSGCDMEESMEDEIGVDQSKSNIGEAR 563
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVS 1282
++A ++L+++ + +IGII+PYN Q ++ + +EI T+D +QGR+K+ I++S
Sbjct: 564 VVATYVKKLLQHGVLESNIGIISPYNGQVKCLKAVIESKQIEIGTVDGFQGREKEVIIIS 623
Query: 1283 FVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
VRS+ P N L + R NVA+TRA++++++V C T+S P LK +++
Sbjct: 624 MVRSNPPPHNV--GFLKEDRRTNVAITRARRQVVIVADCLTISSYPFLKRMVD 674
>gi|395218587|ref|ZP_10402229.1| ATPase AAA [Pontibacter sp. BAB1700]
gi|394454278|gb|EJF08968.1| ATPase AAA [Pontibacter sp. BAB1700]
Length = 645
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 237/525 (45%), Gaps = 98/525 (18%)
Query: 888 IMTSFSVMRYNLVQLFLQSAQSS------QLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
I +F + Y +++ L+ Q + +LR +++ ++ F D L I
Sbjct: 127 IELTFDEISYREMEIALKKVQEANGTRLAELRDIMLGVKPATF-------TDEKLEEI-- 177
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+ LN+ Q A+ K+ A+D A+I G PGTGKT+T+V A+ L +L+T+ +N+AV
Sbjct: 178 -QVLNESQNEAVQKIAQARDVAIIHGPPGTGKTTTLVQAILHTLKSQKRLLVTAPSNTAV 236
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----------NINSVEEIKKR--- 1047
D L KL ++ ++ +RIG V + +H L A N+ E KR
Sbjct: 237 DLLTEKLANEGVNVIRIGNPSRVSDVLLEHTLDAQVMAHRAYKDLKNLRKTAEEYKRMAY 296
Query: 1048 ---------------------------------------LDQVKVVAVTCLGITNPLLTD 1068
LD V+V+ T +G N +
Sbjct: 297 QFKRKFGHQERAQRQLYKSESHRLLDEADNVEHYITDDLLDNVQVITCTLVGAANKAIRH 356
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+D +DEA Q P P+ ++ VL GDH QLPP ++S A + G+ ++LF +
Sbjct: 357 LTYDTVFIDEAAQALEPACWIPISRTNRVVLAGDHCQLPPTIKSLVADKGGLSVTLFEKC 416
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
P+ L++QYRM IM+ SN YG L +A+ + ++L S
Sbjct: 417 INRQPEVSVMLKTQYRMHHHIMQFSNQQFYGGEL------VAHESVHSAELHGYSTIFA- 469
Query: 1189 ALNPCRPVIFVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKN----EIEGKDIG 1242
P V F++T EA+ + Q+ NP E L+ L+K+ E+ IG
Sbjct: 470 ---PDMAVEFIDTAGCGYNEAEMPETQSSANPEEGDLLINHLSNLLKDYDEEEVAPLKIG 526
Query: 1243 IITPYNSQANLIR---------HSL-SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+I PY +Q N ++ H L + I T+D +QG+++D I +S VRS+E
Sbjct: 527 VIAPYRAQINYLQDKVEHTPRLHELHQKRQLSIGTVDSFQGQERDIICMSLVRSNERGE- 585
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
L D R+NVA+TRA++KLI+VG TLS P LI V
Sbjct: 586 --IGFLADERRMNVAMTRARRKLIIVGDSSTLSTNPFFAELIAYV 628
>gi|320036315|gb|EFW18254.1| DNA helicase [Coccidioides posadasii str. Silveira]
Length = 738
Score = 187 bits (475), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 165/585 (28%), Positives = 269/585 (45%), Gaps = 103/585 (17%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T+I V V+F + R PG+ A L ++W + +T + M+ +V++
Sbjct: 156 GVVTKIGERSVWVAFDERGR-PGKQDDEGAAGLWGQKLWLVKLANDIT-YRRMKQTMVRM 213
Query: 903 -FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ ++ S R++ P S +S +L +I + SLND Q+ AI L +++
Sbjct: 214 EKMAESEHSSFMRVLFGHTTP---SPPDWSSASSLDFI--DPSLNDSQKEAIRFALASRE 268
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
ALI G PGTGKT T++ + LL R IL+ +N +VDN++ +L I VRIG
Sbjct: 269 IALIHGPPGTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHP 328
Query: 1022 EVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ-------------------------- 1050
+ + H L A+ S V+++++ +D+
Sbjct: 329 ARLLSSVVDHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRK 388
Query: 1051 ----------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
KVV T G L +KFDV ++DEA Q PL+ A
Sbjct: 389 EFREREARCVDHLVTESKVVLATLHGAGGHQLKSQKFDVVLIDEASQALEAQCWVPLLSA 448
Query: 1095 SKFVLVGDHYQLPPLVQST---------------EARENG-------------MEISLFR 1126
SK +L GDH QLPP ++ST A ++G +E +LF
Sbjct: 449 SKAILAGDHLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLPITSLETTLFD 508
Query: 1127 RLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H P L +QYRM + IM + +Y +L IA +K L
Sbjct: 509 RLLSLHGPTIKRMLTTQYRMHEKIMSFPSCELYESKL------IAADHVKARLLKDLPCD 562
Query: 1186 LKEALNPCRPVIFVNTDMLPAYE-AKDHQTL-----NNPVEACLIAKITQELVKNEIEGK 1239
+++ + C P++F +T E +D + L +N +EA ++A+ Q L+ + +
Sbjct: 563 IQDTDDTCEPLVFYDTQGGEFPERIEDGELLLADSKSNGLEAAIVARHVQNLIAAGLREE 622
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DI +ITPYN+Q L+ L +EI ++D +QGR+K+ ++VS VRS+
Sbjct: 623 DIAVITPYNAQVALLAQLLRERHPGLEIGSVDGFQGREKEAVVVSLVRSNAERE---VGF 679
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLKLLINKVGEQS 1341
LG+ R+NVA+TR ++ L + G T+S+ P LK ++ + E S
Sbjct: 680 LGEKRRLNVAMTRPRRHLCVCGDSETISRGSPFLKRWMDYLEENS 724
>gi|347827230|emb|CCD42927.1| similar to DNA helicase [Botryotinia fuckeliana]
Length = 703
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 234/501 (46%), Gaps = 91/501 (18%)
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+Q A+ S R++ L +P V + W + SLND Q+ AI L + + A
Sbjct: 188 MQEAEYSNFVRVLFGLSSP----SPVPENLENVDIEWLDPSLNDSQKHAIKFALASTEMA 243
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
LI G PGTGKT T++ + +L R +L+ +N +VDN++ +L + VR+G
Sbjct: 244 LIHGPPGTGKTHTLIELILQMLKRNLRVLVCGPSNISVDNIVERLAPHKVPIVRLGHPAR 303
Query: 1024 VHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------------- 1050
+ + H L + S V++++K +D
Sbjct: 304 LLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKTKSGKERKAIYGDLKELRKEF 363
Query: 1051 --------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
KVV T G L D+KFDV I+DEA Q PL+ ASK
Sbjct: 364 RERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVVIIDEASQALEAQCWVPLLSASK 423
Query: 1097 FVLVGDHYQLPPLVQS-------------TEARENGM--EISLFRRLSEEHPQAISA-LQ 1140
VL GDH QLPP ++S TE GM E +LF RL + H I L
Sbjct: 424 VVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGMTLETTLFDRLLKLHGAGIKVMLT 483
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYRM + IM + +Y +L +A +K L+ ++E + P+IF +
Sbjct: 484 TQYRMHEKIMRFPSDELYESKL------VAAEAVKARLLTELPYDVEETEDTIEPLIFFD 537
Query: 1201 T--DMLPAYEAKDH-----------QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
T D P +++ ++ +N +EA L+ + Q LV ++ +DI ++TPY
Sbjct: 538 TQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRHVQNLVDAGLKPEDIAVVTPY 597
Query: 1248 NSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
N+Q L+ S+ + +E+ ++D +QGR+K+ I+VS VRS+ + R LG+ R+N
Sbjct: 598 NAQLALMSRSMKEAFPGIELGSVDGFQGREKEAIIVSLVRSN-SEREV--GFLGEKRRLN 654
Query: 1306 VALTRAKKKLIMVGSCRTLSK 1326
VA+TR ++ L ++G T+S+
Sbjct: 655 VAMTRPRRSLTIIGDSETVSR 675
>gi|115372685|ref|ZP_01459992.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823878|ref|YP_003956236.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115370406|gb|EAU69334.1| superfamily I DNA/RNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396950|gb|ADO74409.1| DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 159/586 (27%), Positives = 267/586 (45%), Gaps = 100/586 (17%)
Query: 813 AAIPTKDMDCTLRSGDYV-ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
A PT+ + +GD V ++ ++ A L++ +R + ++F +
Sbjct: 71 APFPTR-----IHNGDSVAVMPRRAEVKEPAQALVSRATRTRLQLAFDR----------- 114
Query: 872 DADSLLHE-VWRIDKDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSV 929
LHE + R+D ++ MR L ++ L + R +++ E PRF+ S
Sbjct: 115 SPPPFLHEGLLRLDVVPNDVTYERMRAGLARVKALDKGVERRRREVLLGNEPPRFEKPS- 173
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
P+ + LN +Q A+ + L A+D+ L+ G PGTGK++ + + RG
Sbjct: 174 -DAPPS-------RPLNPEQADAVSRALAAEDFFLVHGPPGTGKSTVLAEVAVQAVARGE 225
Query: 990 SILLTSYTNSAVDNLL--------------------IKLKSQSIDFVRIGRH--EVVHKE 1027
+L T+ +N+AVD+LL + + ++D V + H V+ +E
Sbjct: 226 RLLCTAASNAAVDHLLELCLEQGLRAIRVGHPARVAPRFQEHTLDIV-VEEHPDRVLSRE 284
Query: 1028 IQKHCLSAMNINSVEEIKKR---------------------------------LDQVKVV 1054
+ S + + R L++ +V+
Sbjct: 285 LFDEAFSLFGYARRQRTQGRSRERFSNARSSTAEAKGLMDDARALERKAVRAVLERAQVI 344
Query: 1055 AVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
VT + + +L ++FD ++DEA Q T P++L + A K VL GD QLPP V S E
Sbjct: 345 CVTLASLGSGVLAHEEFDRALIDEATQATEPLTLLGFLRAPKLVLAGDPQQLPPTVLSQE 404
Query: 1115 ARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A + G+ +SLF RL ++H + + L+ QYRM IM+ + +YG L A+
Sbjct: 405 AAKAGLGVSLFERLLQDHGEGVKRMLREQYRMNARIMDFPSREMYGGALR------AHPS 458
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT--LNNPVEACLIAKITQEL 1231
+ L+ E P PV+F++T E ++ T L NP EA LI + L
Sbjct: 459 VAERTLAPVLSPGAELDAP--PVLFLDTAGKGFEEQEEESTHSLFNPGEADLILARVKAL 516
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKDCILVSFVRSSEN 1289
+ + +++ +I PY++QA +R + + S VE+ T+D +QGR+KD ILVS RS+
Sbjct: 517 LAAGLSPRELAVIAPYSAQAFHLRERVEILSPDVEVDTVDAFQGREKDAILVSLTRSNA- 575
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ L D R+NVA+TRA++ L +VG TLS P I
Sbjct: 576 --DGNLGFLTDLRRMNVAMTRARRHLFVVGDSATLSGHPFYARFIE 619
>gi|332663425|ref|YP_004446213.1| ATPase AAA [Haliscomenobacter hydrossis DSM 1100]
gi|332332239|gb|AEE49340.1| AAA ATPase [Haliscomenobacter hydrossis DSM 1100]
Length = 634
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 222/446 (49%), Gaps = 84/446 (18%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN Q A+ ++L A+D A+I G PGTGKT+T+V A+K L R ++L+T+ +N+AVD
Sbjct: 182 ALNPSQNLAVNQILAAQDVAVIHGPPGTGKTTTLVQAIKLLAEREKTVLVTAPSNTAVDL 241
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS--------AMNINSVE------------- 1042
L KL + VRIG + + I +H L + N+ V+
Sbjct: 242 LSEKLAELDLRVVRIGNISRIDESILRHTLEYQISQHPDSKNVKKVKIQAADYRRQANRL 301
Query: 1043 ---------EIKKRL-----------------------DQVKVVAVTCLGITNPLLTDKK 1070
E +KRL D+ +V+ T +G +P+L +K
Sbjct: 302 RSKRGYEAYEERKRLEQEASELSAWANSLEQRLVDMILDEAQVITCTLVGAAHPVLDQRK 361
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
F I+DEA Q P + P+ ASK VL GD +QLPP V+S EA + G I++ +
Sbjct: 362 FRTAIVDEAAQALEPATWIPITKASKLVLTGDPFQLPPTVKSQEAAKKGFNITMIEKCL- 420
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
+ Q ++ L QYRM +GIM SN Y + L + E+ + ++ D+++ +
Sbjct: 421 KRLQQVNLLNIQYRMNEGIMGFSNRQFYNNEL-MAAPEVKDHRL---DIAADA------- 469
Query: 1191 NPCRPVIFVNTDMLPAYEAKDH---QTLNNPVEACLIAKITQELVKNEIEG--KDIGIIT 1245
PVIF++T ++ K H Q+ NP E ++ + ++ + +E I II+
Sbjct: 470 ----PVIFIDTAGC-GFDEKVHHAYQSKYNPEEFQVLREHLYQIAEAFLEKIPPSIAIIS 524
Query: 1246 PYNSQANLIRHSLSVS------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
PY QA + L + I+TID +QG++KD + +S VRS NP+ L
Sbjct: 525 PYREQALHMEDELKDDPMVRKLDLTINTIDGFQGQEKDLVFISLVRS--NPKGEI-GFLS 581
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLS 1325
D+ R+NVA+TRA+K+LI+VG T+
Sbjct: 582 DYRRMNVAMTRARKQLIIVGDSATIG 607
>gi|440789574|gb|ELR10880.1| putative DNA helicase [Acanthamoeba castellanii str. Neff]
Length = 1656
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 215/441 (48%), Gaps = 79/441 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL--LMRG-ASILLTSYTNSAV 1001
LN+ QR+ I +LT K L+ G PGTGKT+ +H +K L L RG A IL T+ TN AV
Sbjct: 329 LNESQRKVITTILTRK-LTLVQGPPGTGKTTLAIHLMKLLVHLCRGHAPILCTADTNVAV 387
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM------------------------- 1036
DNLL L + VR+GR + +E++ L A+
Sbjct: 388 DNLLEGLADSGVRAVRVGRPVKIREELRDLSLEALMQEHAANNKLDALRQELAGLSHGKT 447
Query: 1037 ----------------NINSVEEI--KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
NI +E+ L + V+ TC+G + LL + F + I+DE
Sbjct: 448 PEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHDLLASRAFPIVILDE 507
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P SL L+ S+ VL+GDHYQLPP V S EA++ G+ SLF R+ +
Sbjct: 508 STQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAMGIEPY- 566
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM I E + YG ++ G +A + + ++ W E P+
Sbjct: 567 MLEIQYRMHPIISEFPSVHFYGGKIKDGI--VAAQRPSPTGIA----WPSEG----NPIA 616
Query: 1198 FVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEG--KDIGIITPYNSQ--- 1250
FVN D YE + D + N E + ++ + G KDIG+ITPYN Q
Sbjct: 617 FVNVD---GYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKH 673
Query: 1251 -ANLIRHSLSVSSVE------IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
A+L ++ E I+++D YQGR+K+ I+ + VRS N R L DW R
Sbjct: 674 LADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRS--NSRGDV-GFLRDWRR 730
Query: 1304 INVALTRAKKKLIMVGSCRTL 1324
+NVALTRA++ L++VG+ RTL
Sbjct: 731 LNVALTRARRGLLVVGNRRTL 751
>gi|335281378|ref|XP_003122472.2| PREDICTED: DNA-binding protein SMUBP-2 [Sus scrofa]
Length = 987
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 170/580 (29%), Positives = 275/580 (47%), Gaps = 93/580 (16%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HEVWRI 883
SGD V L E +LA +G++T I++ V+V+ ++S D L +R+
Sbjct: 85 SGDIVGLYDEDSQLA--TGVLTRITQKLVTVAL---------DASHDFQLSLDRERSYRL 133
Query: 884 DKDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
K ++ ++ L L S +S L ++ AP S S P L++ +
Sbjct: 134 LKLANDVTYKRLKKALTTLQKYHSGPASALIEVLFGASAP-----SPASDIPPLTFYNT- 187
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + +G+ +L + +N AVD
Sbjct: 188 -ALDASQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGSKVLCCAPSNVAVD 246
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV------ 1051
NL+ +L VR+G + + IQ+H L A+ S V +I++ +DQV
Sbjct: 247 NLVERLARWKQRIVRLGHPARLLESIQQHSLDAVLARSDGARVVADIRRDIDQVLGKTKK 306
Query: 1052 ------------------------------------KVVAVTCLGITN----PLLTDKKF 1071
+VV T G ++ LL D F
Sbjct: 307 TQDKREKSHFRDEIKLLRKELKEREEAAMLESLTAARVVLATNAGASSDGPLKLLPDGHF 366
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
DV ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL EE
Sbjct: 367 DVVVIDECAQALEASCWVPLLKARKCILAGDHKQLPPTIISHKAALAGLALSLMERLVEE 426
Query: 1132 HPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK---VSDLSSCSPWLK 1187
+ L QYRM Q I + ++ +Y RL+ A+A + + DL + +
Sbjct: 427 RGAGVLRMLTVQYRMHQAIAQWASEALYHGRLT------AHASVAGHLLRDLPGVAATEE 480
Query: 1188 EALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T + E +D Q+ NP E L+ Q LV + D+ +IT
Sbjct: 481 TGI----PLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVRLHVQALVDAGVPAGDVAVIT 536
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 537 PYNLQVDLLRQSLAQRHPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRR 593
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT+S LK L+ E +
Sbjct: 594 INVAVTRARRHVAVVCDSRTVSNHAFLKTLVAYFAEHGEV 633
>gi|440794946|gb|ELR16091.1| hypothetical protein ACA1_224920 [Acanthamoeba castellanii str. Neff]
Length = 1615
Score = 187 bits (474), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 215/441 (48%), Gaps = 79/441 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL--LMRG-ASILLTSYTNSAV 1001
LN+ QR+ I +LT K L+ G PGTGKT+ +H +K L L RG A IL T+ TN AV
Sbjct: 328 LNESQRKVITTILTRK-LTLVQGPPGTGKTTLAIHLMKLLVHLCRGHAPILCTADTNVAV 386
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM------------------------- 1036
DNLL L + VR+GR + +E++ L A+
Sbjct: 387 DNLLEGLADSGVRAVRVGRPVKIREELRDLSLEALMQEHAANNKLDALRQELAGLSHGKT 446
Query: 1037 ----------------NINSVEEI--KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
NI +E+ L + V+ TC+G + LL + F + I+DE
Sbjct: 447 PEERAAAKREGVTLHQNIRRLEDYIHNDVLGKADVICATCIGAGHDLLASRAFPIVILDE 506
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P SL L+ S+ VL+GDHYQLPP V S EA++ G+ SLF R+ +
Sbjct: 507 STQATEPASLCALVHNSQHVVLLGDHYQLPPTVTSPEAQQGGLSESLFARMIAMGIEPY- 565
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM I E + YG ++ G +A + + ++ W E P+
Sbjct: 566 MLEIQYRMHPIISEFPSVHFYGGKIKDGI--VAAQRPSPTGIA----WPSEG----NPIA 615
Query: 1198 FVNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEG--KDIGIITPYNSQ--- 1250
FVN D YE + D + N E + ++ + G KDIG+ITPYN Q
Sbjct: 616 FVNVD---GYEKQSTDGYSWFNSAEGEAVFQLVSAFDQRSDVGDVKDIGVITPYNGQVKH 672
Query: 1251 -ANLIRHSLSVSSVE------IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
A+L ++ E I+++D YQGR+K+ I+ + VRS N R L DW R
Sbjct: 673 LADLFSRRGGMNKNEKWHKLNINSVDGYQGREKEVIIFTAVRS--NSRGDV-GFLRDWRR 729
Query: 1304 INVALTRAKKKLIMVGSCRTL 1324
+NVALTRA++ L++VG+ RTL
Sbjct: 730 LNVALTRARRGLLVVGNRRTL 750
>gi|189069122|dbj|BAG35460.1| unnamed protein product [Homo sapiens]
Length = 993
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|62089469|gb|AAH00290.1| IGHMBP2 protein, partial [Homo sapiens]
Length = 868
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|119595135|gb|EAW74729.1| immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|154311776|ref|XP_001555217.1| hypothetical protein BC1G_06347 [Botryotinia fuckeliana B05.10]
Length = 675
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 146/501 (29%), Positives = 234/501 (46%), Gaps = 91/501 (18%)
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
+Q A+ S R++ L +P V + W + SLND Q+ AI L + + A
Sbjct: 188 MQEAEYSNFVRVLFGLSSP----SPVPENLENVDIEWLDPSLNDSQKHAIKFALASTEMA 243
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
LI G PGTGKT T++ + +L R +L+ +N +VDN++ +L + VR+G
Sbjct: 244 LIHGPPGTGKTHTLIELILQMLKRNLRVLVCGPSNISVDNIVERLAPHKVPIVRLGHPAR 303
Query: 1024 VHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------------- 1050
+ + H L + S V++++K +D
Sbjct: 304 LLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQASIKKTKSGKERKAIYGDLKELRKEF 363
Query: 1051 --------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
KVV T G L D+KFDV I+DEA Q PL+ ASK
Sbjct: 364 RERERKCVNTLVGGSKVVLATLHGAGGFQLRDEKFDVVIIDEASQALEAQCWVPLLSASK 423
Query: 1097 FVLVGDHYQLPPLVQS-------------TEARENGM--EISLFRRLSEEHPQAISA-LQ 1140
VL GDH QLPP ++S TE GM E +LF RL + H I L
Sbjct: 424 VVLAGDHLQLPPTIKSLNFKTKTKSQDTETEGIIKGMTLETTLFDRLLKLHGAGIKVMLT 483
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
+QYRM + IM + +Y +L +A +K L+ ++E + P+IF +
Sbjct: 484 TQYRMHEKIMRFPSDELYESKL------VAAEAVKARLLTELPYDVEETEDTIEPLIFFD 537
Query: 1201 T--DMLPAYEAKDH-----------QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
T D P +++ ++ +N +EA L+ + Q LV ++ +DI ++TPY
Sbjct: 538 TQGDDFPEKSEEENVDKKAGKGMLGESKSNEMEAVLVRRHVQNLVDAGLKPEDIAVVTPY 597
Query: 1248 NSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
N+Q L+ S+ + +E+ ++D +QGR+K+ I+VS VRS+ + R LG+ R+N
Sbjct: 598 NAQLALMSRSMKEAFPGIELGSVDGFQGREKEAIIVSLVRSN-SEREV--GFLGEKRRLN 654
Query: 1306 VALTRAKKKLIMVGSCRTLSK 1326
VA+TR ++ L ++G T+S+
Sbjct: 655 VAMTRPRRSLTIIGDSETVSR 675
>gi|401881567|gb|EJT45865.1| hypothetical protein A1Q1_05671 [Trichosporon asahii var. asahii CBS
2479]
Length = 1018
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 140/454 (30%), Positives = 215/454 (47%), Gaps = 82/454 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA---SILLTSYTNSAV 1001
LN Q RAI +L+ + +L+ G PGTGKT +V +K L +L+ ++TN AV
Sbjct: 534 LNPSQTRAIAMMLSER-LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHTNVAV 592
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM------------NINSVEEIK---- 1045
DNL+ LK+Q ++ VR G + V ++ H L A NS E ++
Sbjct: 593 DNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNRARNSKESLQAELS 652
Query: 1046 -------------------------KRLDQVKV------VAVTCLGITNPLLTDKKFDVC 1074
KRL Q +V V TCL T+ +L F
Sbjct: 653 ENLAGPQREAKQKEIGKLNGRIYLLKRLLQAEVLHEADVVCTTCLSATSRVLEVIDFPFV 712
Query: 1075 IMDEAGQTTLPVSLGPLMFAS-KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
+DEA T P+S+ PL S + ++GDH QLPP++ S A++ G+ SLF RL E
Sbjct: 713 FLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERLIHEQA 772
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
L +QYRM I S+ Y +L G+ + + ++ + +L +
Sbjct: 773 VPSIMLDTQYRMHPSIAAFSSEAFYNGQLRDGT--VVDGQVDPVLHPPTTAFLLPDGDSS 830
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN--EIEGKDIGIITPYNSQA 1251
+ + F+N D E+ ++++ N EA + I +L+ + +++G DIG+I PY++Q
Sbjct: 831 KSLTFLNHDF---PESPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYSAQI 887
Query: 1252 NLIRHSLS--------------------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
LI L+ + +EI T+D ++GR+K I+ S VRS+
Sbjct: 888 RLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNT--- 944
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
LGDW R+NV LTRAK+ LIM+GS RTLS
Sbjct: 945 GGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|85397213|gb|AAI05091.1| Immunoglobulin mu binding protein 2 [Homo sapiens]
gi|85397939|gb|AAI05089.1| Immunoglobulin mu binding protein 2 [Homo sapiens]
Length = 993
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|406696583|gb|EKC99865.1| hypothetical protein A1Q2_05830 [Trichosporon asahii var. asahii CBS
8904]
Length = 1018
Score = 186 bits (472), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 214/454 (47%), Gaps = 82/454 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA---SILLTSYTNSAV 1001
LN Q RAI +L+ + +L+ G PGTGKT +V +K L +L+ ++TN AV
Sbjct: 534 LNPSQTRAIAMMLSER-LSLVQGPPGTGKTRVIVETIKLLKQHWQIPHPVLVCAHTNVAV 592
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM------------NINSVEEI----- 1044
DNL+ LK+Q ++ VR G + V ++ H L A NS E +
Sbjct: 593 DNLVEGLKTQGVNAVRFGSPDRVSPRVEAHTLEARIEQHPAYPVLNRARNSKESLQAELS 652
Query: 1045 -------------------------KKRLD-----QVKVVAVTCLGITNPLLTDKKFDVC 1074
K+RL + VV TCL T+ +L F
Sbjct: 653 ENLAGPQREAKQKEIGKLNGRIYLLKRRLQAEVLHEADVVCTTCLSATSRVLEVIDFPFV 712
Query: 1075 IMDEAGQTTLPVSLGPLMFAS-KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
+DEA T P+S+ PL S + ++GDH QLPP++ S A++ G+ SLF RL E
Sbjct: 713 FLDEASMATEPLSIVPLTKGSAQVAIIGDHKQLPPVIVSEAAQQGGLGTSLFERLIHEQA 772
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
L +QYRM I S+ Y +L G+ + + ++ + +L +
Sbjct: 773 VPSIMLDTQYRMHPSIAAFSSEAFYNGQLKDGT--VVDGQVDPVLHPPTTAFLLPDGDSS 830
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN--EIEGKDIGIITPYNSQA 1251
+ + F+N D E+ ++++ N EA + I +L+ + +++G DIG+I PY++Q
Sbjct: 831 KSLTFLNHDF---PESPQNRSIANHHEAGRVCDIVADLLASNPDLKGADIGVIAPYSAQI 887
Query: 1252 NLIRHSLS--------------------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
LI L+ + +EI T+D ++GR+K I+ S VRS+
Sbjct: 888 RLITEFLTIDERRQRAFRQWLGPERAREIEDIEIRTVDGFEGREKSVIIFSTVRSNT--- 944
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
LGDW R+NV LTRAK+ LIM+GS RTLS
Sbjct: 945 GGFLGFLGDWRRLNVGLTRAKRALIMLGSLRTLS 978
>gi|375084259|ref|ZP_09731266.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
gi|374741144|gb|EHR77575.1| DNA helicase, UvrD/REP family protein [Thermococcus litoralis DSM
5473]
Length = 656
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 166/294 (56%), Gaps = 12/294 (4%)
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPP 1108
D+ V+ T + D +FDV I+DEA Q T+P L P+ A +FVL GDH QLPP
Sbjct: 355 DKTDVILSTNSSAALEFIRDVEFDVAIIDEASQATIPSVLIPIAKAKRFVLAGDHKQLPP 414
Query: 1109 LVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS-- 1166
+ S EA+E + +LF +L + +P+ L+ QYRM + +ME + Y ++
Sbjct: 415 TILSEEAKE--LSETLFEKLIDLYPEKAKMLEIQYRMNEKLMEFPSREFYNGKIKADESV 472
Query: 1167 DEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT-DMLPAYE--AKDHQTLNNPVEACL 1223
I A +KV + PW L P++FV+T + +E K + NP+EA L
Sbjct: 473 KNITLADLKVREPFFGEPW-DSILKREEPLVFVDTAERRDKWERQRKGSTSRENPLEALL 531
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSF 1283
+ +I ++L + ++ + IGIITPY+ Q +LIR SL +E+HT+D YQGR+K+ I++SF
Sbjct: 532 VKEIVEKLFRMGVKEEWIGIITPYDDQVDLIR-SLVGEEIEVHTVDGYQGREKEVIVLSF 590
Query: 1284 VRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
VRS+ + L D R+NVALTRAK+KLI +G TLS P K + V
Sbjct: 591 VRSN---KEDELGFLTDLRRLNVALTRAKRKLIAIGDSETLSTHPTYKRFLEFV 641
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K+LN QR+AI L ++D+ LI G GTGKT T+ + + RG+ +L T+ +N AV
Sbjct: 168 DKNLNPTQRKAINLALGSEDFFLIHGPFGTGKTRTLAELILQEVKRGSKVLATAESNVAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
DNL+ +L + + VR+G V K +++ L A + S E ++
Sbjct: 228 DNLVERLWGK-VKLVRLGHPSRVSKHLKESTL-AFQVESHERYRR 270
>gi|442323516|ref|YP_007363537.1| DNA helicase [Myxococcus stipitatus DSM 14675]
gi|441491158|gb|AGC47853.1| DNA helicase [Myxococcus stipitatus DSM 14675]
Length = 637
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 227/493 (46%), Gaps = 87/493 (17%)
Query: 913 RRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTG 972
R +++ E PR D F +P + LN +Q A+ + L A+D+ L+ G PGTG
Sbjct: 158 REVLLGNEPPRTDKPRDF--EPG-------RPLNPEQLDAVGRALAAEDFFLVHGPPGTG 208
Query: 973 KTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHC 1032
K++ + + RG +L T+ +N+AVD+LL Q + VR+G V +Q+H
Sbjct: 209 KSTVLAEVAAQAVARGQRLLCTAASNAAVDHLLDLCLGQGLRAVRVGHPARVAARLQEHT 268
Query: 1033 L------------------SAMNI---------------------NSVEEIKKRLDQVK- 1052
L A ++ S E K LD+ +
Sbjct: 269 LDIVVEEHPDRVVSRELFDEAFSLLGYARRQRTQGRSRARFSNARASTTEAKAMLDEARA 328
Query: 1053 --------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV 1098
VV VT + + +L+ ++FD+ ++DEA Q T P++L + A +
Sbjct: 329 LERKAVRSVLATADVVCVTLASLDSGVLSGEQFDLALLDEATQATEPLALLGFLRAPIVI 388
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALI 1157
L GD QLPP V S +A G+ +SLF RL +H + L QYRM IM+ + +
Sbjct: 389 LAGDPQQLPPTVLSQDAARAGLAVSLFERLLADHGDGVKRMLLEQYRMNTRIMDFPSREM 448
Query: 1158 YGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ---- 1213
YG +L A+ + L+ P E P PV+F++T A + D +
Sbjct: 449 YGGQLR------AHPSVADRTLADVLPPGTEVDAP--PVLFLDT----AGKGFDEEVEPT 496
Query: 1214 --TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTID 1269
+L N EA LI + L+ + +++ +ITPY++QA+ +R L VE+ T+D
Sbjct: 497 TRSLFNTGEADLIEARVRALLALGLSQRELAVITPYSAQAHRLRERLESFAPDVEVDTMD 556
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
+QGR+KD +LVS RS+ L D R+NVALTRA++ L +VG TLS P
Sbjct: 557 AFQGREKDAVLVSLTRSNS---EGQVGFLNDLRRMNVALTRARRHLFVVGDSATLSGHPF 613
Query: 1330 LKLLINKVGEQSG 1342
I + G
Sbjct: 614 YARFIEESQAHGG 626
>gi|431910166|gb|ELK13239.1| DNA-binding protein SMUBP-2 [Pteropus alecto]
Length = 984
Score = 186 bits (472), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 167/577 (28%), Positives = 272/577 (47%), Gaps = 87/577 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HEVWRI 883
SGD V L E +LA +G++T +++ V+V+F + S D L + +R+
Sbjct: 85 SGDIVGLYDEGGQLA--TGVLTRVTQKSVTVAF---------DESHDFQLSLDQEKSYRL 133
Query: 884 DKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSE 942
K ++ ++ L+ L S +S L ++ AP S S+ P I +
Sbjct: 134 LKLANDVTYKRLKRALITLKKYHSGPASSLIEVLFGGRAP-----SPASEIPPPVLINA- 187
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G +L + +N+AVD
Sbjct: 188 -SLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIIVQAVKQGCKVLCCAPSNTAVD 246
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL--------SAMNI---------------- 1038
NLL +L + +R+G + +Q+HCL SA I
Sbjct: 247 NLLERLARCGLRVLRLGHPARLLGSVQQHCLDEVLARGDSAPIIADIRRDIYQALVKNKK 306
Query: 1039 -----------NSVEEIKKRLDQ------------VKVVAVTCLGITN----PLLTDKKF 1071
N V+ ++K L + V T G ++ LL D F
Sbjct: 307 TQDKRERSDLRNEVKLLRKELREREEAAMLQSLTAADAVLATNTGASDDGPLKLLPDSYF 366
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D+ ++DE Q PL+ A K +L GDH QLPP S +A G+ +SL RL+E
Sbjct: 367 DMVVIDECSQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEA 426
Query: 1132 HPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
+ + L QYRM Q IM+ ++ +Y +L+ +A ++ DL + + +
Sbjct: 427 YGAGTVRTLTVQYRMHQAIMQWASEALYHGQLTA-HPSVAGHLLR--DLPGVAATEETGI 483
Query: 1191 NPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P++ V+T L E Q+ NP E L+ Q LV + DI +I+PYN
Sbjct: 484 ----PLLLVDTAGCGLLEQEGDGDQSKGNPGEVRLVGLHVQALVDAGVRASDIAVISPYN 539
Query: 1249 SQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q +L+R SLS +EI ++D +QGR+K+ +++SFVRS+ R L + RINV
Sbjct: 540 LQVDLLRQSLSHKHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRRINV 596
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
A+TRA++ + +V RT+S L+ L+ E + +
Sbjct: 597 AVTRARRHVALVCDSRTVSNHAFLQTLVAYFTEHAEV 633
>gi|332837111|ref|XP_508608.3| PREDICTED: DNA-binding protein SMUBP-2 [Pan troglodytes]
gi|410247290|gb|JAA11612.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
gi|410295562|gb|JAA26381.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
gi|410335665|gb|JAA36779.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
Length = 1001
Score = 186 bits (472), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 79 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 134
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 135 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 180
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 181 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 236
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 237 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 296
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 297 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 356
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 357 TGASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 416
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S +A
Sbjct: 417 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSS-VAGHL 475
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
++ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 476 LR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 529
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 530 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 587
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 588 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 632
>gi|284161290|ref|YP_003399913.1| DNA helicase [Archaeoglobus profundus DSM 5631]
gi|284011287|gb|ADB57240.1| DNA helicase [Archaeoglobus profundus DSM 5631]
Length = 636
Score = 186 bits (471), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 114/288 (39%), Positives = 168/288 (58%), Gaps = 22/288 (7%)
Query: 1042 EEIKKR-LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
EEI + +++ +VV T + D FDV ++DEA Q+T+P L P+ A KFVL
Sbjct: 345 EEIAREVIEEAEVVLATN---STAFTIDINFDVAVIDEATQSTIPSVLIPINKAEKFVLA 401
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDH QLPP V E + +LF L E++P+ L+ QYRM + +ME N YG
Sbjct: 402 GDHKQLPPTVLKAEE----LSKTLFEMLIEKYPEHSKMLEIQYRMNEKLMEFPNKEFYGG 457
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNN 1217
+L + + N I ++DL S E +NP +IF++T P + K + N
Sbjct: 458 KLKA-DESVRN--ITLADLRVESE--DEIVNPRNVLIFLDTSKCPDRFERQRKGSTSREN 512
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKD 1277
P+EA ++ KI ++LV+ ++ + IG+ITPY Q +L+R + VE++T+D YQGR+K+
Sbjct: 513 PLEAKIVTKIVKKLVRAGVKREWIGVITPYEDQVDLLRRMI---DVEVNTVDGYQGREKE 569
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
I++SFVRS+ R L D R+NVALTRAK+KLIMVG +TLS
Sbjct: 570 VIIISFVRSN---RRGEIGFLEDLRRLNVALTRAKRKLIMVGDSKTLS 614
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 917 VDLEAPRFDSGSVFSQDPALSYIW-SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS 975
V L+A +F G +P +Y ++ LN+ QR A+ L + D+ LI G GTGKT
Sbjct: 143 VALKALKFALGLEKPDEPEKAYFEPVDERLNESQREAVALALGSNDFFLIHGPFGTGKTR 202
Query: 976 TMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG---RHEVVHKEIQKHC 1032
T+ V+ + RG +L T+ +N AVDNL+ +L+ ++ VR+G R ++ +
Sbjct: 203 TLAEIVRQEVKRGRKVLATAESNIAVDNLVEQLR--DLNIVRLGHPSRTQLKSTTLSAKV 260
Query: 1033 LSAMNINSVEEIKKRLDQV 1051
+ VEE++ R +++
Sbjct: 261 VGHERYKDVEELRSRAERL 279
>gi|410220680|gb|JAA07559.1| immunoglobulin mu binding protein 2 [Pan troglodytes]
Length = 997
Score = 186 bits (471), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S +A
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSS-VAGHL 471
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
++ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 472 LR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|397517199|ref|XP_003828806.1| PREDICTED: DNA-binding protein SMUBP-2 [Pan paniscus]
Length = 1001
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 279/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 79 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 134
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 135 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 180
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 181 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 236
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 237 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 296
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 297 VADIRKDIDQVFVKNKKTQNKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 356
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 357 TGASADGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 416
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S +A
Sbjct: 417 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSS-VAGHL 475
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
++ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 476 LR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 529
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 530 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 587
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 588 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 632
>gi|406855654|pdb|4B3F|X Chain X, Crystal Structure Of 1ghmbp2 Helicase
Length = 646
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 168/586 (28%), Positives = 280/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 73 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 128
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 129 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 174
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 175 --SPASEIHPLTFFNT--CLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAV 230
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 231 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 290
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 291 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 350
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 351 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 410
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+
Sbjct: 411 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVAR 467
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T L E +D Q+ NP E L++ Q L
Sbjct: 468 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 523
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 524 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 581
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 582 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 626
>gi|330995988|ref|ZP_08319882.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
gi|329573985|gb|EGG55563.1| putative DNA helicase [Paraprevotella xylaniphila YIT 11841]
Length = 659
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/465 (29%), Positives = 216/465 (46%), Gaps = 78/465 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ +VL AKD ++ G PGTGKT+T+V A+ L R + +L+ + +N AVD +
Sbjct: 195 LNPTQETAVNEVLRAKDVMIVHGPPGTGKTTTLVEAIYETLHRESQVLVCAQSNMAVDWI 254
Query: 1005 LIKLKSQSIDFVRIGR-------------------------------------------- 1020
KL + + +RIG
Sbjct: 255 SEKLTDRGVAVLRIGNPSRVNDKMLSFTYERRFEAHPSYPSLWAIRKAIRDLYAHRPSSG 314
Query: 1021 HEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E H++I + A + + + ++ +V+A T G N +L KKF +DEA
Sbjct: 315 REAFHQKIARLRDRATELE-IAINESLFNETRVIACTLTGSANRVLAGKKFSTLFIDEAA 373
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q + A + +L GDH QLPP V+ EA + G++ +L ++ P A+S L+
Sbjct: 374 QALEASCWIAIQKAGRVILAGDHRQLPPTVKCPEAMKGGLDRTLMETIAARQPSAVSLLR 433
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSD---------EIANAKIKVSDLSSCSPWLKEALN 1191
+QYRM IM S+ Y ++ + + I +D +P+L E
Sbjct: 434 TQYRMNDAIMHFSSECFYDGKVESAPEVKYRGILDWDTPMEWIDTADEEQTAPYLTE--E 491
Query: 1192 PCRPVIFVN--TDMLPAYEAK---DHQTLNNPVEACLIAKIT----QELVKNEI--EGKD 1240
P PV T +P +E D + +NP EA L I Q++ K I E D
Sbjct: 492 PSNPVSAPAPPTAGIPDFEETRNPDSTSRSNPEEARLTLNILKAYFQKIGKERILAERID 551
Query: 1241 IGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
G+I+PY Q L+R L + + ++T+D +QG+++D IL+S VRS+EN +
Sbjct: 552 TGLISPYKGQVQLLRTLLRRDAFFKPYRHLLSVNTVDGFQGQERDVILISLVRSNENGQ- 610
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
L D R+NVA+TRA+ KLI+VG+ TL + P KL+ + +
Sbjct: 611 --IGFLHDLRRMNVAITRARMKLILVGNSHTLCRTPFYKLMYSYI 653
>gi|119191656|ref|XP_001246434.1| hypothetical protein CIMG_00205 [Coccidioides immitis RS]
Length = 708
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 161/569 (28%), Positives = 262/569 (46%), Gaps = 102/569 (17%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T+I V V+F + R PG+ A L ++W + +T + M+ +V++
Sbjct: 156 GVVTKIGERSVWVAFDERGR-PGKQDDDGAAGLWGQKLWLVKLANDIT-YRRMKQTMVRM 213
Query: 903 -FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
+ ++ S R++ P S +S +L +I + SLND Q+ AI L +++
Sbjct: 214 EKMAESEHSSFMRVLFGHTTP---SPPDWSSASSLDFI--DPSLNDSQKEAIRFALASRE 268
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
ALI G PGTGKT T++ + LL R IL+ +N +VDN++ +L I VRIG
Sbjct: 269 IALIHGPPGTGKTHTLIELILQLLRRNLRILVCGPSNISVDNIVERLAPHKIPLVRIGHP 328
Query: 1022 EVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ-------------------------- 1050
+ + H L A+ S V+++++ +D+
Sbjct: 329 ARLLSSVVDHSLEALTQTSDAAAIVKDVRREIDEKQASIRKTRSGRERREIYKDLKELRK 388
Query: 1051 ----------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
KVV T G L ++KFDV ++DEA Q PL+ A
Sbjct: 389 EFREREARCVDHLVTESKVVLATLHGAGGHQLKNQKFDVVLIDEASQALEAQCWVPLLSA 448
Query: 1095 SKFVLVGDHYQLPPLVQST---------------EARENG-------------MEISLFR 1126
SK +L GDH QLPP ++ST A ++G +E +LF
Sbjct: 449 SKAILAGDHLQLPPTIKSTTTNTPSGSSRKLKSSNAIQSGADDLTISSLSITSLETTLFD 508
Query: 1127 RLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H P L +QYRM + IM + +Y +L IA +K L
Sbjct: 509 RLLSLHGPTIKRMLTTQYRMHEKIMSFPSCELYESKL------IAADHVKARLLKDLPCD 562
Query: 1186 LKEALNPCRPVIFVNTDMLPAYE-AKDHQTL-----NNPVEACLIAKITQELVKNEIEGK 1239
+++ + C P++F +T E +D + L +N +EA ++A+ Q L+ + +
Sbjct: 563 IQDTDDTCEPLVFYDTQGGEFPERIEDGELLLADSKSNDLEAAVVARHVQNLIAAGLREE 622
Query: 1240 DIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
DI +ITPYN+Q L+ L +EI ++D +QGR+K+ ++VS VRS+
Sbjct: 623 DIAVITPYNAQVALLAQLLRERHPGLEIGSVDGFQGREKEAVVVSLVRSNAERE---VGF 679
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
LG+ R+NVA+TR +K L + G T+S+
Sbjct: 680 LGEKRRLNVAMTRPRKHLCVCGDSETISR 708
>gi|338532930|ref|YP_004666264.1| putative DNA helicase [Myxococcus fulvus HW-1]
gi|337259026|gb|AEI65186.1| putative DNA helicase [Myxococcus fulvus HW-1]
Length = 639
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 155/590 (26%), Positives = 262/590 (44%), Gaps = 98/590 (16%)
Query: 815 IPTKDMDCTLRSGDYV-ILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDA 873
+PT+ L +GD V +L ++ A LI+ + + ++F +
Sbjct: 73 LPTR-----LHNGDLVAVLPRRAEVKEPARALISRATSTRIQLAFDR-----------SP 116
Query: 874 DSLLHE-VWRIDKDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFS 931
+HE + R+D ++ +R L ++ L R +++ E PR+D
Sbjct: 117 PPYVHEGLLRLDVVPNDVTYDRLRAGLQRIKALDKGAERHRREVLLGNEPPRYDKPR--- 173
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ + LN +Q+ A + L A+D+ L+ G PGTGK++ + + G +
Sbjct: 174 ------ELEPTRPLNPEQQDATARALAAEDFFLVHGPPGTGKSTVLAEIAAQAVADGKRL 227
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS----------------- 1034
L T+ +N+AVD+LL + + +R+G V +Q+H L
Sbjct: 228 LCTAASNAAVDHLLDLCLDKGLRAIRVGHPARVAARLQEHTLDIVVESHPDRGVSRDLFD 287
Query: 1035 ----------------------AMNINSVEEIKKRLDQVK---------------VVAVT 1057
A S E K LD+ + V+ VT
Sbjct: 288 EAYSLLGYARRQRTQGRSRERFANARASTSEAKGMLDEARALERKAVRSVLANADVICVT 347
Query: 1058 CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
+ + +L ++FD+ ++DEA Q T P++L + A + +L GD QLPP V S EA +
Sbjct: 348 LSSLDSGVLAGEQFDLALLDEATQATEPLALLGFLRAPRVILAGDPQQLPPTVLSQEAAK 407
Query: 1118 NGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
G+ +SLF RL ++H + + L+ QYRM IM+ + +YG L A V
Sbjct: 408 AGLGVSLFERLLKDHGEGVKRMLREQYRMNARIMDFPSREMYGGEL--------RAHPSV 459
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT--LNNPVEACLIAKITQELVKN 1234
+D + + A PV++++T E + T L NP EA L+ + L+
Sbjct: 460 ADRTLDAVLTPGADVDAPPVLYLDTAGKGFEEEVEPTTKSLFNPGEAGLVEARVRALLAA 519
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+ +++ +ITPY++QA+ +R + S VE+ T+D +QGR+KD ++VS RS+
Sbjct: 520 GLSPRELAVITPYSAQAHQLRERIEALSPEVEVDTVDAFQGREKDAVIVSLTRSNS---E 576
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
L D R+NVALTRA++ L +VG TLS P + G
Sbjct: 577 GQLGFLTDLRRMNVALTRARRHLFVVGDSATLSGHPFYTRFVEGTQAHGG 626
>gi|401776|gb|AAA53082.1| DNA-binding protein [Homo sapiens]
Length = 993
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 164/586 (27%), Positives = 280/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINS 1040
+G +L + +N AVDNL+ +L +R+G + + +Q+H L A+ + +
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESVQQHSLDAVLARSDSAQN 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL + FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +++ S + A+
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQVTAHS---SVAR 469
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
+ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 470 HLLRDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|448440118|ref|ZP_21588366.1| DNA replication factor Dna2 [Halorubrum saccharovorum DSM 1137]
gi|445690635|gb|ELZ42845.1| DNA replication factor Dna2 [Halorubrum saccharovorum DSM 1137]
Length = 906
Score = 185 bits (469), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/411 (33%), Positives = 210/411 (51%), Gaps = 27/411 (6%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G+ S DP + + N Q A+ + A+D ALI G PGTGKT T+ ++AL+
Sbjct: 518 AGAPGSDDPDAPDAYIDN--NAAQNEAVGLAVDAEDCALIHGPPGTGKTYTIARTIRALV 575
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
G +LL+++TN AVDN L L+ Q D +R+G V ++Q L + +
Sbjct: 576 EEGNRVLLSAFTNRAVDNALEALRDQGFEDVLRVGTETGVRGDMQDVRLVQRGDPNAKAA 635
Query: 1045 KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHY 1104
+ R V G + +L + +FDV ++DEA Q T P + + A +FVLVGDH
Sbjct: 636 ELRDAPVVAATTAACG--SRVLRECEFDVAVVDEASQLTEPGTHAAINRADRFVLVGDHE 693
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPP+V++ EN ++ SLF+RL EE+P A L QYRM Q I ++A Y L
Sbjct: 694 QLPPVVRA----ENDLQTSLFQRLIEEYPDASVMLDRQYRMSQRIQAFASAEFYDGALRP 749
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
+ E+A ++ DL L E L V FV+ + ++D N EA +
Sbjct: 750 ATPEVAGQTLR--DLGVDPADLPEGL--AGGVSFVDPNG-----SRDGN--RNVREAERV 798
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFV 1284
A + V ++ DIG+I P+ +Q I SV+ + T+D++QG K+ I+VS V
Sbjct: 799 AAVVDAYVAAGVDPDDIGVIAPFRAQVAEIGRRTSVT---VDTVDRFQGSSKEVIVVSLV 855
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ + + D R+NVALTRAKK+L +VG L+ P L++
Sbjct: 856 ATG----DLDGPIFEDHRRMNVALTRAKKQLTLVGDADALASEPFYARLLD 902
>gi|406855655|pdb|4B3G|A Chain A, Crystal Structure Of Ighmbp2 Helicase In Complex With Rna
gi|406855656|pdb|4B3G|B Chain B, Crystal Structure Of Ighmbp2 Helicase In Complex With Rna
Length = 646
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/583 (28%), Positives = 280/583 (48%), Gaps = 88/583 (15%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKPLRLPGRNSS 870
AA+P+ + SGD V L ++ + +A+G++T +++ V+V+F + S
Sbjct: 73 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE--------SH 120
Query: 871 SDADSLLHE-VWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGS 928
SL E +R+ K ++ ++ L+ L S +S L ++ AP S
Sbjct: 121 DFQQSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP-----S 175
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
S+ L++ + L+ Q+ A++ L+ K+ A+I G PGTGKT+T+V + + +G
Sbjct: 176 PASEIHPLTFFNT--CLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG 233
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
+L + +N AVDNL+ +L +R+G + + IQ+H L A+ S V +
Sbjct: 234 LKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVAD 293
Query: 1044 IKKRLDQV------------------------------------------KVVAVTCLGI 1061
I+K +DQV VV T G
Sbjct: 294 IRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGA 353
Query: 1062 TN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE 1117
+ LL + FDV ++DE Q PL+ A K +L GDH QLPP S +A
Sbjct: 354 SADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAAL 413
Query: 1118 NGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S + A+ +
Sbjct: 414 AGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHS---SVARHLL 470
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKN 1234
DL P + P++ V+T + E +D Q+ NP E L++ Q LV
Sbjct: 471 RDL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDA 526
Query: 1235 EIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+ +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+ R
Sbjct: 527 GVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN---RK 583
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 GEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 626
>gi|315231815|ref|YP_004072251.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
gi|315184843|gb|ADT85028.1| ATP-dependent helicase-like protein [Thermococcus barophilus MP]
Length = 652
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 168/308 (54%), Gaps = 11/308 (3%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E I++ + + VV T + D FDV ++DEA Q T+P L P+ A KF+L G
Sbjct: 348 EIIREVISKADVVLSTNSSAALDFIKDINFDVAVVDEASQATIPSVLIPIAKAKKFILAG 407
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
DH QLPP + S EA+E + +LF +L + +P L+ QYRM + +ME + Y R
Sbjct: 408 DHKQLPPTILSEEAKE--LSETLFEKLIKLYPSKAKMLEIQYRMNERLMEFPSREFYNGR 465
Query: 1162 LSC--GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP-AYEAKDHQTLN-- 1216
+ G I + + PW LNP P++FV+T P +E + +L+
Sbjct: 466 IKAYDGVKNITLLDLGIRVFHFGEPW-DSILNPKEPLVFVDTSKHPEKWERQRKGSLSRE 524
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDK 1276
NP+EA L+ +I + L++ I + IG+ITPY+ Q +LI + +E+ T+D YQGR+K
Sbjct: 525 NPLEAKLVKEIVKRLLRMGIRPESIGVITPYDDQRDLISSLIENDEIEVKTVDGYQGREK 584
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
+ I++SFVRS+ + L D R+NV+LTRAK+KLI +G TL P K +
Sbjct: 585 EVIILSFVRSN---KKGELGFLTDLRRLNVSLTRAKRKLIAIGDSETLGAHPTYKRFVEF 641
Query: 1337 VGEQSGIL 1344
V ++ +
Sbjct: 642 VKKKGAFI 649
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 17/182 (9%)
Query: 882 RIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWS 941
RID +F NL +L S Q R + LE P+ + + +
Sbjct: 119 RIDLYANDVTFKRQMENLERL---SKSGKQALRFALGLEKPK--------ESVEVEFKPF 167
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K LN+ QR+A+ L +D+ LI G GTGKT T+ + + RG +L T+ +N AV
Sbjct: 168 DKQLNESQRKAVSFALGGEDFFLIHGPFGTGKTRTLAEVILQEVKRGKKVLATAESNVAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVKVVAV 1056
DNL+ +L + + VR+G V K +++ L+ V+E++ + +++ ++
Sbjct: 228 DNLVERLWGK-VKLVRLGHPSRVSKHLKESTLAYQVETHEKFRRVKELRSKAERLAMLRD 286
Query: 1057 TC 1058
C
Sbjct: 287 QC 288
>gi|332878015|ref|ZP_08445745.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|357047737|ref|ZP_09109335.1| putative DNA helicase [Paraprevotella clara YIT 11840]
gi|332683977|gb|EGJ56844.1| putative DNA helicase [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|355529425|gb|EHG98859.1| putative DNA helicase [Paraprevotella clara YIT 11840]
Length = 659
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/478 (30%), Positives = 223/478 (46%), Gaps = 87/478 (18%)
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
FS P + + W LN Q A+ +VL AKD ++ G PGTGKT+T+V A+ L R +
Sbjct: 185 FSFQP-IRFPW----LNPTQETAVNEVLRAKDVMIVHGPPGTGKTTTLVEAIYETLHRES 239
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEI-----QKHCLSAMNINSVEEI 1044
+L+ + +N AVD + KL + + +R+G V+ ++ ++ + + S+ I
Sbjct: 240 QVLVCAQSNMAVDWISEKLTDRGVAVLRVGNPSRVNDKMLSFTYERRFKAHPSYPSLWAI 299
Query: 1045 KKRL--------------------------------------DQVKVVAVTCLGITNPLL 1066
+K + ++ +V+A T G N +L
Sbjct: 300 RKAIRDLYARRPSSGREAFHQKVARLRDRATELEIAINESLFNEARVIACTLAGSANRVL 359
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
KKF +DEA Q + + +L GDH QLPP V+ EA + G++ +L
Sbjct: 360 AGKKFPTLFIDEAAQALEASCWIAIQKVGRVILAGDHRQLPPTVKCPEALKGGLDRTLME 419
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD---------EIANAKIKVS 1177
++ HP A+S L++QYRM IM S+ Y ++ + + I +
Sbjct: 420 TIAARHPSAVSLLRTQYRMNDVIMRFSSECFYDGKVESAPEVKYRGILDWDTPMEWIDTA 479
Query: 1178 DLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDH-QTLN-------NPVEACLIAKIT- 1228
D +P+L E P V LPA E D +T N NP EA L I
Sbjct: 480 DEEQTAPYLTE-----EPSGAVCAPALPAVEVPDFGETRNPDSTSRSNPEEARLTLNILK 534
Query: 1229 ---QELVKNEI--EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRD 1275
Q++ K I E D GII+PY Q L+R L + + ++T+D +QG++
Sbjct: 535 AYFQKIGKERILAERIDTGIISPYKGQVQLLRALLRRDAFFKPYRHLLSVNTVDGFQGQE 594
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
+D IL+S VRS+EN + L D R+NVA+TRA+ KLI+VG+ TL + P KLL
Sbjct: 595 RDVILISLVRSNENGQ---IGFLHDLRRMNVAITRARMKLILVGNSHTLCRTPFYKLL 649
>gi|218261116|ref|ZP_03476067.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii DSM
18315]
gi|218224216|gb|EEC96866.1| hypothetical protein PRABACTJOHN_01731 [Parabacteroides johnsonii DSM
18315]
Length = 638
Score = 183 bits (465), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 65/455 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL AKD +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 249
Query: 1005 LIKLKSQSIDFVRIG------------------------------------------RHE 1022
KL + I +RIG R
Sbjct: 250 SEKLVDRGIHVLRIGNPTRVNDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRRKS 309
Query: 1023 VVHKEIQKHCLSAMNINSVE-EIK---KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
KE ++ LS + + E E+K + D+ +VVA T +G N +LT++ F +DE
Sbjct: 310 HSEKETGRNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 369
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L +++++ P+ +S
Sbjct: 370 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKPETVSL 429
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L++QYRM + IM + Y D L + E+ + I + + WL A C
Sbjct: 430 LKTQYRMNESIMRFPSRWFYRDELQ-SAPEVKHRGI--LEFDTPVVWLDTA--DCHFEED 484
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
TD + KD TL I KI +E V + E D G+I+PY SQ IR +
Sbjct: 485 QLTDSMSRIN-KDEATLLVSTLQKYIEKIGKERVLD--ESIDFGLISPYKSQVQYIRGLV 541
Query: 1259 SVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
+ + +HT+D +QG+++D I++S VR+++ R LGD R+NVA+TR
Sbjct: 542 KRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGR---IGFLGDLRRMNVAITR 598
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
A+ KL+++G TL++ K L + E +++
Sbjct: 599 ARMKLMILGDAPTLTRHAFYKELYEYIRENGQVVS 633
>gi|149276566|ref|ZP_01882710.1| DNA helicase [Pedobacter sp. BAL39]
gi|149233086|gb|EDM38461.1| DNA helicase [Pedobacter sp. BAL39]
Length = 634
Score = 183 bits (465), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/459 (28%), Positives = 225/459 (49%), Gaps = 87/459 (18%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVD 1002
SLN Q+ A+ K+L+A A++ G PGTGKT+T+V AVKAL + IL+ + +N+AVD
Sbjct: 177 SLNVMQQLAVDKILSADHLAIVHGPPGTGKTTTLVQAVKALSKQDHQQILVAAPSNTAVD 236
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVK----- 1052
L KL Q ++ +RIG V + + L + + + +KK+ ++ K
Sbjct: 237 LLTEKLAEQGLNVLRIGNPSRVSERLMSLTLDSRMAEHPEMKQAKALKKQANEYKNMAHK 296
Query: 1053 -------------------------------------------VVAVTCLGITNPLLTDK 1069
V+A T +G + +
Sbjct: 297 YKRNFGKAEKEQRKALFDEAHKIMKEVGNIEQYVSDDIISKADVIAATLVGANHHTIRKL 356
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
K+ I+DEAGQ P P++ + K + GDH QL P ++S EA + G+ +L ++
Sbjct: 357 KYKTVIIDEAGQALEPACWIPIIKSEKVIFAGDHCQLSPTIKSNEAAKKGLSNTLMEKMV 416
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
++P+++ L+ QYRM + IME S+ + Y +L D +A + D
Sbjct: 417 NQYPESVVLLEEQYRMNRSIMEYSSEVFYQGKLKA-HDSVATHLLYDDD----------- 464
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAK----ITQEL-VKNEIEG-KDIGI 1243
+P++F++T E + +++NP EA ++K + QEL ++ IE + I
Sbjct: 465 ----KPLLFIDTAGASFEEKTEGHSISNPDEASFVSKQLETLVQELSLRYSIEDFPTVAI 520
Query: 1244 ITPYNSQ----ANLIRHSLSV----SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I+PY Q L++HS + S + ++TID +QG+++D +++S VRS++
Sbjct: 521 ISPYKQQIVHIKELLQHSPDIDKFKSKISVNTIDSFQGQERDVVVISMVRSND---EGII 577
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
L D R+NVA+TRA+KKLI++G TL ++P + I
Sbjct: 578 GFLADIRRMNVAMTRARKKLIVIGDSATLCRLPFYENFI 616
>gi|423344038|ref|ZP_17321751.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
gi|409213558|gb|EKN06575.1| hypothetical protein HMPREF1077_03181 [Parabacteroides johnsonii
CL02T12C29]
Length = 637
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 134/455 (29%), Positives = 219/455 (48%), Gaps = 65/455 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL AKD +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIG------------------------------------------RHE 1022
KL + I +RIG R
Sbjct: 249 SEKLVDRGIHVLRIGNPTRVNDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRRKS 308
Query: 1023 VVHKEIQKHCLSAMNINSVE-EIK---KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
KE ++ LS + + E E+K + D+ +VVA T +G N +LT++ F +DE
Sbjct: 309 HSEKETVRNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 368
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L +++++ P+ +S
Sbjct: 369 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKPETVSL 428
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L++QYRM + IM + Y D L + E+ + I + + WL A C
Sbjct: 429 LKTQYRMNESIMRFPSRWFYRDELQS-APEVKHRGI--LEFDTPVVWLDTA--DCHFEED 483
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
TD + KD TL I KI +E V + E D G+I+PY SQ IR +
Sbjct: 484 QLTDSMSRIN-KDEATLLVSTLQKYIEKIGKERVLD--ESIDFGLISPYKSQVQYIRGLV 540
Query: 1259 SVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
+ + +HT+D +QG+++D I++S VR+++ R LGD R+NVA+TR
Sbjct: 541 KRNVFFKPFRRLITVHTVDGFQGQERDVIMISLVRANDKGR---IGFLGDLRRMNVAITR 597
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
A+ KL+++G TL++ K L + E +++
Sbjct: 598 ARMKLMILGDAPTLTRHAFYKELYEYIRENGQVVS 632
>gi|403341854|gb|EJY70244.1| DNA-binding protein SMUBP-2 [Oxytricha trifallax]
Length = 1044
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 161/578 (27%), Positives = 265/578 (45%), Gaps = 121/578 (20%)
Query: 869 SSSDA-DSLLHEVWRIDKDEIMTSFSVM----------------------RYNLVQLFLQ 905
S +DA D + V+R+ +D+I+ SF M R L+
Sbjct: 90 SQTDASDRVEGIVYRVTQDQIVVSFKEMHDFEGMRQPLALVILANEVTHKRCKEALEILK 149
Query: 906 SAQSSQLRRMI---VDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
+ Q +RMI +++ P+ + + +D + Y + LN+ Q+ AI K LT+ D
Sbjct: 150 NYTQRQNQRMIEVLFEIQEPQVQHDTEYLKD--MKYF--NQGLNESQQTAIEKCLTSTDV 205
Query: 963 ALILGMPGTGKTSTMVHAV-KALLMRGASILLTSYTNSAVDNLLIKLKSQS--IDFVRIG 1019
++I G PGTGKT+T+V + +++ + A I+ + +N AVDN++ +L + + ++ VRIG
Sbjct: 206 SMIHGPPGTGKTTTVVELILQSVEKQKAKIMACAPSNIAVDNIIERLYASNPKLNIVRIG 265
Query: 1020 RHEVVHKEIQKHCLSAM----------------NINSVEE-------------------- 1043
+ + +Q+ CL A+ IN + +
Sbjct: 266 HPARLMESVQQFCLDALISKRTDYGKQTNEIRRMINKLNQKLQRTKSKTERKDIYGEYKM 325
Query: 1044 IKKRLDQVKV---------VAVTCLGIT-----------NPLLTDKKFDVCIMDEAGQTT 1083
+KK L Q++ V C +T N + D FD+ ++DE Q+
Sbjct: 326 LKKDLKQIEQNHINDIFMRADVICCTLTSAGDKTLTRFINNNMQDSLFDMLVIDECAQSI 385
Query: 1084 LPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P P+ FA K V+ GDH QL V+S EA G+ +SLF R+ + + + L QY
Sbjct: 386 EPACWIPIKFAKKLVMAGDHKQLDATVKSDEASRKGLSLSLFERVMKFKNKISTMLDEQY 445
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM + IM+ SN +Y L D +K + +E L P++ ++T
Sbjct: 446 RMNEKIMKWSNQAMYDGNLKAHED------VKNRLMVDLYAQSQEEL-MLSPLLLIDTAG 498
Query: 1204 LPAYEAKDHQTLN----NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS 1259
YE D Q+ N N E L+ ++ +ELV I DIG+ITPYN+Q N I+ ++
Sbjct: 499 ALMYEGIDEQSENESKYNNGECDLVIQLLKELVTMGIRKSDIGVITPYNAQVNQIKKAIR 558
Query: 1260 VSS------------------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ +E+ T+D +QGR+K+ I++S VRS NP+ L +
Sbjct: 559 GAEELHTHVEIGQIPQRGGERIEVSTVDGFQGREKEVIIISMVRS--NPKG-EIGFLSNE 615
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
R+NVA+TRAK+ ++ T+S+ LK LI E
Sbjct: 616 RRMNVAVTRAKRLCAIIADSGTVSRNNFLKDLIQYFKE 653
>gi|2498040|sp|Q60560.1|SMBP2_MESAU RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Immunoglobulin mu-binding protein 2; AltName:
Full=Insulin II gene enhancer-binding protein; AltName:
Full=RIPE3B-binding complex 3B2 p110 subunit; Short=RIP-1
gi|290919|gb|AAB00104.1| insulin II gene enhancer-binding protein [Mesocricetus auratus]
Length = 989
Score = 183 bits (464), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 163/582 (28%), Positives = 272/582 (46%), Gaps = 89/582 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V+V+F + L L N+
Sbjct: 82 SFTSGDIVGLYDANESSQLATGVLTRITQKSVTVAFDESHDFQLNLDRENT--------- 132
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+ K ++ ++ L+ L S +S L +++ +P S ++ P +
Sbjct: 133 --YRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDVLLGGSSP-----SPTTEIPPFT 185
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G IL + +
Sbjct: 186 FYNT--ALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKILCCAPS 243
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV- 1051
N AVDNL+ +L +R+G + + Q+H L A+ N V +I+K +DQV
Sbjct: 244 NVAVDNLVERLALCKKRILRLGHPARLLESAQQHSLDAVLARSDNAQIVADIRKDIDQVF 303
Query: 1052 -----------------------------------------KVVAVTCLGITN----PLL 1066
VV T G ++ LL
Sbjct: 304 GKNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLL 363
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL
Sbjct: 364 PENHFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTISHKAALAGLSRSLME 423
Query: 1127 RLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL E+H A+ L QYRM Q I ++ +Y +L+ +A +K DL P
Sbjct: 424 RLVEKHGAGAVRMLTVQYRMHQAITRWASEAMYHGQLT-AHPSVAGHLLK--DL----PG 476
Query: 1186 LKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ + P++ ++T L + +D Q+ NP E L+ Q LV + DI +
Sbjct: 477 VADTEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAV 536
Query: 1244 ITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
I PYN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L +
Sbjct: 537 IAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAED 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ RT++ LK L++ E +
Sbjct: 594 RRINVAVTRARRHVAVICDSRTVNNHAFLKTLVDYFTEHGEV 635
>gi|354502665|ref|XP_003513404.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cricetulus griseus]
gi|344257739|gb|EGW13843.1| DNA-binding protein SMUBP-2 [Cricetulus griseus]
Length = 987
Score = 182 bits (463), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 161/579 (27%), Positives = 272/579 (46%), Gaps = 89/579 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLHEVW 881
SGD V L ++ +A+G++T I++ V+V+F + L L N+ +
Sbjct: 85 SGDIVGLYDANESSQLATGVLTRITQKSVTVAFDESHDFQLNLDRENT-----------Y 133
Query: 882 RIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+ K ++ ++ L+ L +S L +++ P S ++ P+L++
Sbjct: 134 RLLKLANDVTYKRLKKALMTLKKYHCGPASSLIDVLLGGSTP-----SPTTEIPSLTFYN 188
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N A
Sbjct: 189 T--ALDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIA 246
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV---- 1051
VDNL+ +L +R+G + + +Q+H L A+ N V +I+K +DQV
Sbjct: 247 VDNLVERLAMCKKRILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRKDIDQVFGKN 306
Query: 1052 --------------------------------------KVVAVTCLGITN----PLLTDK 1069
VV T G ++ LL +
Sbjct: 307 KKTQDKREKSNFRNEIKLLRKELKEREEAATVQSLTAADVVLATNTGASSDGPLKLLPEN 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL RL+
Sbjct: 367 HFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTISHKAALAGLSRSLMERLA 426
Query: 1130 EEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H + L QYRM Q I ++ +Y +L+ +A +K DL P + +
Sbjct: 427 EKHGAGVVRMLTVQYRMHQAITRWASEAMYHGQLT-AHPSVAGHLLK--DL----PGVAD 479
Query: 1189 ALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L + +D Q+ NP E L+ Q LV + DI +I P
Sbjct: 480 TEETSVPLLLIDTAGCGLLELDEEDSQSKGNPGEVRLVTLHIQALVDAGVHAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSSKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ RT++ LK L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSRTVNNHTFLKTLVDYFTEHGEV 635
>gi|303283432|ref|XP_003061007.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
gi|226457358|gb|EEH54657.1| tRNA-splicing endonuclease positive effector [Micromonas pusilla
CCMP1545]
Length = 1099
Score = 182 bits (463), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 145/432 (33%), Positives = 210/432 (48%), Gaps = 54/432 (12%)
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
F SG+V DP KSLN+ QR A+ LT + L+ G PGTGKT T V VK
Sbjct: 550 FASGAV---DPI------AKSLNESQRNALRSALTNR-LTLVQGPPGTGKTYTSVAIVKG 599
Query: 984 LL-MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-NINSV 1041
LL M +L TS +N+AVDNL+ + + VR+GR E V E+ K+ L M N +
Sbjct: 600 LLAMNRGPVLCTSDSNTAVDNLVQGMADARMRVVRVGRSEAVRPELLKYVLERMFNDRTG 659
Query: 1042 EEI----KKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS-K 1096
E ++ L Q VV TC G + +L F ++DEA Q T P SL PL +
Sbjct: 660 PERSLAQQRALRQADVVCCTCSGAGSDMLEKFNFSAVLLDEASQVTEPSSLVPLSKGCHQ 719
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
VLVGDH QLPP V +A G+ SLF RL+ + L Q+RM + +
Sbjct: 720 LVLVGDHKQLPPTVTCRDAGNAGLSTSLFDRLANMGVKP-KLLDVQFRMHPALSRFPSDA 778
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQ 1213
Y R+ G+ +A + S + W + P+ FV + AY + +
Sbjct: 779 FYDGRVKSGT--LARDRPAPSGFA----WPNAGV----PIAFVPVGVPGVSGAYGGHERR 828
Query: 1214 TLN----NPVEACLIAKITQELVK---NEIEGKDIGIITPYNSQANLIRHSL-------- 1258
N N EA ++ + L++ E+E +D+G++TPY +Q IR L
Sbjct: 829 EGNGSFVNQREADVVVDVLSRLLRAGGGELEPRDVGVVTPYAAQVRHIRRQLRNRGIQTG 888
Query: 1259 -----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
VE+ ++D YQGR+K+ ++VS VRS++ T + D R NV LTRAK+
Sbjct: 889 IDRETGKPGVEVSSVDGYQGREKEVMVVSTVRSND---RGTMGFVSDARRCNVTLTRAKR 945
Query: 1314 KLIMVGSCRTLS 1325
+++ G TL+
Sbjct: 946 GVVVCGDPNTLA 957
>gi|220931020|ref|YP_002507928.1| putative DNA helicase [Halothermothrix orenii H 168]
gi|219992330|gb|ACL68933.1| putative DNA helicase [Halothermothrix orenii H 168]
Length = 754
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 182/309 (58%), Gaps = 11/309 (3%)
Query: 1038 INSVEE--IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
INS+EE ++ L+ VV T + LL +F++ ++DEA Q T P +L PL+ A
Sbjct: 443 INSLEERAVRDLLNSADVVCSTNSTAGSELLEGWEFELVVIDEATQATEPGALIPLIKAQ 502
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL-SEEHPQAISALQSQYRMCQGIMELSN 1154
K VL+GDH QLPP V S +A + G+ SLF RL S + S L+ QYRM IME SN
Sbjct: 503 KAVLIGDHKQLPPTVLSQKADKQGLSKSLFERLYSLYGDKYCSLLEIQYRMNDLIMEFSN 562
Query: 1155 ALIYGDRLSCGSDEIANAKIK--VSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK-- 1210
+ YG RL + E+ N ++ ++S + ++ +P PV+F++T + A E
Sbjct: 563 SHFYGGRLKS-APEVRNHTLRDLGIEISEGKCFTEKGFDPDNPVVFLDTSNMEARERSLP 621
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDK 1270
+ + +NPVEA ++ + E +K +E + I +ITPY Q +L+ H ++EI+T+D
Sbjct: 622 NSDSYDNPVEAEIVLDLVGEALKLGLEQRHIAVITPYKDQVDLLNHLSRFENLEINTVDG 681
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
+QGR+K+ +++S VRS+++ RN L D R+NVA+TR K+KLI++G T+S +
Sbjct: 682 FQGREKEVVMISLVRSNKH-RNI--GFLRDLRRLNVAITRPKRKLIIIGDSNTISGHEVY 738
Query: 1331 KLLINKVGE 1339
L++ V E
Sbjct: 739 SSLVDYVRE 747
Score = 74.3 bits (181), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 38/313 (12%)
Query: 722 YHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQK 781
+ T +++ + L++LE KE ++ ++EI R SG + + L +E
Sbjct: 84 HRYTKKVSNYVNKFKELVELERKE-EMERHEIEIKRLSGEERQKNGRAILHLRGRDEG-- 140
Query: 782 SYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESD-RLA 840
+ N+++ FVRQ G +P + ++ GD V++S + +
Sbjct: 141 TGLGNKYIVKFVRQWQ--------------GEKLP----ETEIKVGDLVMISKHNPLDSS 182
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
+ + E + + ++V F K + + R+D +F M L
Sbjct: 183 NPTATVVEKTNYSITVVFDK----------KPPSFIYKKGLRMDLYVNDITFQRMLSALD 232
Query: 901 QLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAK 960
Q+ ++R +++ ++ P + + ++P + W LN Q+ A+ K + A+
Sbjct: 233 QIRRAKGNLGRIRNILLGIKKPGW-----YRREPEIIE-WVNDDLNLSQKNAVKKAIQAR 286
Query: 961 DYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR 1020
D LI G PGTGKT T V V + G +L T+ +N AVDNL+ +L ++ +R+G
Sbjct: 287 DIYLIQGPPGTGKTVTAVEVVNQAVKSGKRVLATAESNVAVDNLVERLVGYGLNVIRVGH 346
Query: 1021 HEVVHKEIQKHCL 1033
V +++H L
Sbjct: 347 PFRVTPLLREHTL 359
>gi|198274180|ref|ZP_03206712.1| hypothetical protein BACPLE_00320 [Bacteroides plebeius DSM 17135]
gi|198272855|gb|EDY97124.1| putative DNA helicase [Bacteroides plebeius DSM 17135]
Length = 630
Score = 182 bits (461), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 225/471 (47%), Gaps = 84/471 (17%)
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
S FS P + + W LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R
Sbjct: 180 STFSFQP-VRFPW----LNATQDEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAIYETLHR 234
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV-------- 1023
+L+ + +N AVD + KL + + +RIG R E
Sbjct: 235 ENQVLVCAQSNMAVDWISEKLVDRGVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLW 294
Query: 1024 -VHKEIQKHCLSAMNINSVEEIKKRLDQVK-------------------VVAVTCLGITN 1063
+ K I++ + N E I+++++ +K V+A T +G N
Sbjct: 295 SIRKAIRELYTRSRKGNDRESIRQKINSLKDRATELEIRINESLFSEARVIACTLVGSAN 354
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
LLT +KF +DEA Q PL A + + GDH QLPP V++ EA G+ +
Sbjct: 355 RLLTGQKFGTVFIDEAAQALEAACWIPLRKADRVIWAGDHCQLPPTVKNPEALRAGLGHT 414
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
L + + + P+ +S L+ QYRM IM S+ YG L + +K +
Sbjct: 415 LMQAIVKNKPEVVSLLKVQYRMNDEIMRFSSDWFYGGMLQSAPE------VKYRSI---- 464
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVK----NEI 1236
L+ P+ +VNT+ + E +++ +N P I ++ + + K +
Sbjct: 465 ------LDFDTPIEWVNTEGMDCNEEFVGENYGRINKPEAELSIGQLKEYITKIGRERFL 518
Query: 1237 EGK-DIGIITPYNSQANLIRHSLSV--------SSVEIHTIDKYQGRDKDCILVSFVRSS 1287
E + D+G+I+PY +Q +R + S + I+T+D +QG+++D IL+S VR++
Sbjct: 519 EERIDVGLISPYKAQVQYLRQLVRKDAFFKPYRSLITINTVDGFQGQERDVILISLVRAN 578
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
E+ + L D R+NVA+TRA+ KLI++G TL+K K L VG
Sbjct: 579 EDGQ---IGFLNDLRRMNVAITRARMKLIILGDASTLTKHAFYKKLYEYVG 626
>gi|42490896|gb|AAH66215.1| Ighmbp2 protein, partial [Mus musculus]
Length = 866
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 270/579 (46%), Gaps = 89/579 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLHEVW 881
SGD V L ++ +A+G++T I++ V+V+F + L L N+ +
Sbjct: 85 SGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT-----------Y 133
Query: 882 RIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+ K ++ ++ L+ L S +S L +++ P S + P LS+
Sbjct: 134 RLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLSFYN 188
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N A
Sbjct: 189 T--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIA 246
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV---- 1051
VDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 247 VDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKN 306
Query: 1052 --------------------------------------KVVAVTCLGITN----PLLTDK 1069
VV T G ++ LL +
Sbjct: 307 KKTQDKREKGNFRSEIKLLRRELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPED 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL RL+
Sbjct: 367 YFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTASHRAALAGLSRSLMERLA 426
Query: 1130 EEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H + L QYRM Q IM ++ +Y +L+ +A +K DL P + +
Sbjct: 427 EKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTS-HPSVAGHLLK--DL----PGVTD 479
Query: 1189 ALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I P
Sbjct: 480 TEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVIAP 539
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L + RI
Sbjct: 540 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAEDRRI 596
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 597 NVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|20093510|ref|NP_613357.1| superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
gi|19886342|gb|AAM01287.1| Superfamily I DNA/RNA helicase [Methanopyrus kandleri AV19]
Length = 698
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 165/290 (56%), Gaps = 16/290 (5%)
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L D +FDV ++DE Q T P +L P+ A +F++ GDH QLPP + S EA+ + +L
Sbjct: 390 FLEDIEFDVAVVDEGSQATEPSALIPISRAKRFIMAGDHKQLPPTILSEEAQPE-LSRTL 448
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA--KIKVSDLSSC 1182
F RL E+HP+ L+ QYRM + IME N Y +L S + + V D
Sbjct: 449 FERLIEKHPKLSRMLRVQYRMHENIMEFPNREFYNGKLEAHSSVRRHTLEDLGVGDPEVG 508
Query: 1183 SPWLKEALNPCRPVIFVNTD-----MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIE 1237
PW + L+P P+ FV+T + ++ NP+EA ++A ++++LV+ +
Sbjct: 509 RPW-ADVLHPKEPLGFVDTSRLPERLRRERRRPGSKSRENPMEAAIVAFLSEQLVRQGLS 567
Query: 1238 GKDIGIITPYNSQANLIRHS---LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
+D+ +I+PY+ Q +LI S L + VE++T+D +QGR+K+ ++VSFVRS NP+
Sbjct: 568 QEDLAVISPYDDQVDLISKSLDELGLGDVEVNTVDGFQGREKEAVIVSFVRS--NPKGEV 625
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
L D R+NVA+TR ++KLI +G TLS P + I V ++SG L
Sbjct: 626 -GFLRDMRRLNVAITRPRRKLICIGDSGTLSSHPTYRRFIEHV-KRSGAL 673
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
+K++D + GD V++S + +G + E ++ ++V+F P P + +
Sbjct: 79 SKEIDTQISVGDLVLVSRGDPLKSDLTGTVVEKTKRSITVAFDSP---PPKWAVGKG--- 132
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
RID +F M L ++ + +LR I+ L+ P S +
Sbjct: 133 ----IRIDLYANDVTFQRMMEALERIRHAEGRLRELRNTIIGLKNP--------SDAEPI 180
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSY 996
+ + LN QR A+ L A D+ LI G PGTGKT T+ + + RG +L T+
Sbjct: 181 DVDFVDTDLNYSQREAVEHALGAPDFFLIHGPPGTGKTRTITEVIVQEVRRGNKVLATAE 240
Query: 997 TNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+N A DN+L L + ++ VR+G V K++++ LSA+
Sbjct: 241 SNVAADNILEYLVERGVEAVRVGHPARVSKKLKERTLSAI 280
>gi|410974756|ref|XP_003993808.1| PREDICTED: DNA-binding protein SMUBP-2 [Felis catus]
Length = 957
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 169/580 (29%), Positives = 273/580 (47%), Gaps = 87/580 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL--HEV 880
+ SGD V L E +LA +G++T I + V+V+F + S D L
Sbjct: 73 SFTSGDIVGLYDEGGQLA--TGILTRIMQRSVTVAF---------DESHDFQLSLDRERA 121
Query: 881 WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+ K ++ ++ L+ L S +S L ++ P S + +Q P
Sbjct: 122 YRLLKLANDVTYKRLKKALITLKKYHSGPASSLIEVVFGGSPP---SPASETQPPP---- 174
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + RG +L + +N
Sbjct: 175 FCNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRRGLKVLCCAPSNV 234
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV--- 1051
AVDNL +L +R+G + + IQ+H L A+ S V +I+K +DQ
Sbjct: 235 AVDNLAERLARCQQKVLRLGHPARLLECIQQHSLDAVLARSDSAQIVADIRKDIDQAFLK 294
Query: 1052 ---------------------------------------KVVAVTCLGIT--NPL--LTD 1068
VV T G + PL L D
Sbjct: 295 NRQTQDKREKSSFWNEIKLLRKELKEREEAAMLESLRSAAVVLATNTGASPDGPLKLLPD 354
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FDV ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL RL
Sbjct: 355 GHFDVVVIDECAQALEASCWIPLLKAGKCILAGDHKQLPPTIVSPKAAAAGLALSLMERL 414
Query: 1129 -SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+E+ + L QYRM + IM+ ++ +Y RL+ +A ++ DL + +
Sbjct: 415 VAEQGASVVRTLTVQYRMHRAIMQWASEALYHGRLT-AHPSVAGHLLR--DLPGVAATEE 471
Query: 1188 EALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P++ V+T + E +D Q+ NP E L++ Q LV+ + DI +IT
Sbjct: 472 TGI----PLLLVDTAGCGLFELEEEDDQSKGNPGEVRLVSLHVQALVEAGVRASDIAVIT 527
Query: 1246 PYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+ R L + R
Sbjct: 528 PYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSN---RKGEVGFLAEDRR 584
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + +V RT++ LK L++ E +
Sbjct: 585 INVAVTRARRHVAVVCDSRTVNNHAFLKTLVDHFTEHGEV 624
>gi|328866870|gb|EGG15253.1| hypothetical protein DFA_10087 [Dictyostelium fasciculatum]
Length = 854
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/505 (29%), Positives = 239/505 (47%), Gaps = 80/505 (15%)
Query: 881 WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI- 939
WRID + T+ M + L + S+ + + + D+ G A YI
Sbjct: 216 WRID---LGTNLITMERMMKALTMVSSDKALYQTKLADIIFGHLKPGKTLEDTCATEYIP 272
Query: 940 -----------------WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK 982
+ +LN Q+ AI K + + +LI G PGTGK++T ++ ++
Sbjct: 273 FQTKESPLKFKDMFPMDYKTWNLNPSQKDAIEKSICRR-ASLIQGPPGTGKSTTAIYLLR 331
Query: 983 ALLMRGAS------ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL--- 1033
L+ R S IL TS+TN+ VDNLL L ++ +R+G V +E++ L
Sbjct: 332 LLVHRKQSGKSNVKILATSFTNTGVDNLLEGLLKAGVNVLRLGDANKVREELRCATLEYR 391
Query: 1034 -----------------------SAMNINSVEEIKKRL-DQVKVVAVTCLGITNPLLTDK 1069
S+ + S EIK RL + V+ TC+G + +L D+
Sbjct: 392 MEEELNRWDSSAKRSNQGSKPGSSSYYMQSEREIKSRLISEADVICSTCIGSGHEMLMDE 451
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFAS-KFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
KF + ++DEA Q T P L PL+ +S + L GD QL P++ S +A E G+ IS+F RL
Sbjct: 452 KFQIIVVDEATQATEPAILIPLLKSSEQMYLFGDQNQLAPIILSHKAIEGGLNISMFDRL 511
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ L +QYRM I + Y L+ G+++ +N KI + W +
Sbjct: 512 FKSGLTPF-LLNTQYRMHSSISDFPRHHFYNGLLNNGTND-SNLKIPIG-----IKWPQI 564
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE--IEGKDIGIITP 1246
PV+F+ D+ E H +L N EA + ++ + L++N+ + +IGIITP
Sbjct: 565 DF----PVVFI--DISNGREEIKHHSLYNNEEAVAVVQVAESLLENDESLFRNNIGIITP 618
Query: 1247 YNSQANLIRHSLS------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
Y++Q I S + + T+D YQGR+ D I+ S VRS+ L D
Sbjct: 619 YHAQVKHINQVFSNDKSWRGAQPSVATVDSYQGREMDVIIFSTVRSNT---KGNIGFLKD 675
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLS 1325
W R+NV++TRAK+ L+++G+ T++
Sbjct: 676 WRRLNVSITRAKRGLVVIGNFGTIN 700
>gi|74214996|dbj|BAE33491.1| unnamed protein product [Mus musculus]
Length = 993
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 271/582 (46%), Gaps = 89/582 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V+V+F + L L N+
Sbjct: 82 SFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT--------- 132
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+ K ++ ++ L+ L S +S L +++ P S + P LS
Sbjct: 133 --YRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLS 185
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +
Sbjct: 186 FYNT--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPS 243
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV- 1051
N AVDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 244 NIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVF 303
Query: 1052 -----------------------------------------KVVAVTCLGITN----PLL 1066
VV T G ++ LL
Sbjct: 304 GKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLL 363
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL
Sbjct: 364 PEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLME 423
Query: 1127 RLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL+E+H + L QYRM Q IM ++ +Y +L+ +A +K DL P
Sbjct: 424 RLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLT-SHPSVAGHLLK--DL----PG 476
Query: 1186 LKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ + P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +
Sbjct: 477 VTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPSEVRLVTLHIQALVDAGVQAGDIAV 536
Query: 1244 ITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
I PYN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L +
Sbjct: 537 IAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAED 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 594 RRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|341582257|ref|YP_004762749.1| DNA helicase [Thermococcus sp. 4557]
gi|340809915|gb|AEK73072.1| DNA helicase, putative [Thermococcus sp. 4557]
Length = 710
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 167/283 (59%), Gaps = 18/283 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L P+ A +FVL GDH QLPP + S +A+E G +LF L E
Sbjct: 380 YDVAIIDEATQATIPSVLIPINRAKRFVLAGDHKQLPPTILSEKAKELGN--TLFEGLIE 437
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-----W 1185
+P L QYRM + +ME + YG R+ DE A I ++DL SP W
Sbjct: 438 RYPGKSEMLTVQYRMNERLMEFPSREFYGGRIEA--DESIRA-ITLADLGVKSPACDGLW 494
Query: 1186 LKEALNPCRPVIFVNTDMLP-AYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
E L P ++FV+T +E + + ++ NP+EA L+ ++ ++L++ + + IG
Sbjct: 495 -NEVLRPENVLVFVDTSGREDRFERQRYGSESRENPLEARLVKEVVEKLLELGLNPEWIG 553
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+ITPY+ Q +LIR SL VE+ T+D YQGR+K+ I++SFVRS+ R L D
Sbjct: 554 VITPYDDQRDLIR-SLLPEEVEVKTVDGYQGREKEVIVLSFVRSN---RKGELGFLKDLR 609
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NV+LTRAK+KLI++G TLS P K L+ V E+ +++
Sbjct: 610 RLNVSLTRAKRKLILIGDSSTLSVHPTYKRLVEFVSERETVVD 652
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%)
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ AL + ++SLN QRRA+ K L + D+ LI G GTGKT T+ ++ + RG +
Sbjct: 160 ESEALEFTPFDRSLNASQRRAVAKALGSPDFFLIHGPFGTGKTRTLAELIRQEVERGNRV 219
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
L T+ +N AVDNL+ +L + VR+G V + + + L+ +
Sbjct: 220 LATAESNVAVDNLVERLVDSGLKVVRVGHPSRVSRSLHETTLAYL 264
>gi|426369511|ref|XP_004051731.1| PREDICTED: DNA-binding protein SMUBP-2 [Gorilla gorilla gorilla]
Length = 997
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 167/586 (28%), Positives = 276/586 (47%), Gaps = 94/586 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVILSTESDRLA-VASGLITEISRFHVSVSFSKP----LRLPG 866
AA+P+ + SGD V L ++ + +A+G++T +++ V V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAANEGSQLATGILTRVTQKSVMVAFDESHDFQLSLDR 130
Query: 867 RNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFD 925
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 131 ENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP--- 176
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + +
Sbjct: 177 --SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAV 232
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS----- 1040
+G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 233 KQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQI 292
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
V +I+K +DQV VV T
Sbjct: 293 VADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATN 352
Query: 1059 LGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G + LL FDV ++DE Q PL+ A K +L GDH QLPP S +
Sbjct: 353 TGASADGPLKLLPKSHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHK 412
Query: 1115 ARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ S +A
Sbjct: 413 AALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSS-VAGHL 471
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQEL 1231
++ DL P + P++ V+T + E +D Q+ NP E L++ Q L
Sbjct: 472 LR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQAL 525
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
V + +DI +I+PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 526 VDAGVLARDIAVISPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN-- 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ T++ LK L+
Sbjct: 584 -RKGEVGFLAEDRRINVAVTRARRHVAIICDSHTVNNHAFLKTLVE 628
>gi|74191771|dbj|BAE32841.1| unnamed protein product [Mus musculus]
Length = 1066
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/579 (28%), Positives = 270/579 (46%), Gaps = 89/579 (15%)
Query: 826 SGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLHEVW 881
SGD V L ++ +A+G++T I++ V+V+F + L L N+ +
Sbjct: 158 SGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT-----------Y 206
Query: 882 RIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
R+ K ++ ++ L+ L S +S L +++ P S + P LS+
Sbjct: 207 RLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLSFYN 261
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N A
Sbjct: 262 T--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIA 319
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV---- 1051
VDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 320 VDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVFGKN 379
Query: 1052 --------------------------------------KVVAVTCLGITN----PLLTDK 1069
VV T G ++ LL +
Sbjct: 380 KKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLLPED 439
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL RL+
Sbjct: 440 YFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLMERLA 499
Query: 1130 EEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E+H + L QYRM Q IM ++ +Y +L+ +A +K DL P + +
Sbjct: 500 EKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLT-SHPSVAGHLLK--DL----PGVTD 552
Query: 1189 ALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I P
Sbjct: 553 TEETRVPLLLIDTAGCGLLELEEEDSQSKGNPSEVRLVTLHIQALVDAGVQAGDIAVIAP 612
Query: 1247 YNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
YN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L + RI
Sbjct: 613 YNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAEDRRI 669
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
NVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 670 NVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 708
>gi|313674250|ref|YP_004052246.1| DNA helicase [Marivirga tractuosa DSM 4126]
gi|312940948|gb|ADR20138.1| DNA helicase [Marivirga tractuosa DSM 4126]
Length = 655
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/353 (35%), Positives = 190/353 (53%), Gaps = 28/353 (7%)
Query: 1002 DNLLIKLKS--------QSIDFVRIGRHEVVHKEIQKHC--LSAMNINSVEEIKKRLDQV 1051
DN +I+L S QS ++ + + ++I K+ A+ ++++E I L+Q
Sbjct: 311 DNKIIQLASSKKPYRGIQSAKLRKMAKWIKIQQQINKNYEQAQALQLSAIESI---LEQS 367
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
V+ T + LL D FDV +DEA Q+T P +L PL+ K+VL GDH QLPP V+
Sbjct: 368 PVICATNSSAGSELLKDIIFDVVCIDEATQSTEPEALIPLVKGRKWVLAGDHQQLPPTVK 427
Query: 1112 STEARENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
S+EA + + ISLF R +E P S L QYRM Q IM SN Y +L +
Sbjct: 428 SSEASD--LSISLFERFQKELPANRSNILTIQYRMHQEIMRFSNENFYQKKLKAHP---S 482
Query: 1171 NAKIKVSDLSSCSPW------LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
AK ++DL P+ L++ + V+FV + + D + N E L
Sbjct: 483 VAKHSLADLPGFDPFPYVNPALEKVVQSSPAVVFVPCEQGVEEQLADSHSWFNKAEIALT 542
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFV 1284
+IT L+ + + +DIGII+PY+ Q + ++ L VEI +ID +QGR+K+ I++S V
Sbjct: 543 KEITDALLSSRLFPEDIGIISPYDQQVSRLKSDLKDYHVEIKSIDGFQGREKEVIIISLV 602
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
RS+ L D+ R+NVALTRAK+KLI++GS TL P+ K LI K+
Sbjct: 603 RSN---LKEDIGFLRDYRRLNVALTRAKRKLIIIGSPFTLQSNPIYKSLIKKI 652
Score = 65.9 bits (159), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ +++LN Q+ I + L D LI G PGTGKT+T+ + +K+L G +L+T+ +N+
Sbjct: 175 FQQQNLNSKQQEIINQALVTNDIFLIHGPPGTGKTTTLSYLIKSLFEGGKKVLVTAPSNT 234
Query: 1000 AVDNLLIKLKSQSIDFVRIG 1019
AVDN+L KL++ I RIG
Sbjct: 235 AVDNILEKLQNLEIPSTRIG 254
>gi|153945808|ref|NP_033238.2| DNA-binding protein SMUBP-2 [Mus musculus]
gi|74149012|dbj|BAE32174.1| unnamed protein product [Mus musculus]
gi|148700981|gb|EDL32928.1| immunoglobulin mu binding protein 2 [Mus musculus]
gi|189442115|gb|AAI67242.1| Immunoglobulin mu binding protein 2 [synthetic construct]
Length = 993
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 271/582 (46%), Gaps = 89/582 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V+V+F + L L N+
Sbjct: 82 SFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT--------- 132
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+ K ++ ++ L+ L S +S L +++ P S + P LS
Sbjct: 133 --YRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLS 185
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +
Sbjct: 186 FYNT--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPS 243
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV- 1051
N AVDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 244 NIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVF 303
Query: 1052 -----------------------------------------KVVAVTCLGITN----PLL 1066
VV T G ++ LL
Sbjct: 304 GKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLL 363
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL
Sbjct: 364 PEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLME 423
Query: 1127 RLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL+E+H + L QYRM Q IM ++ +Y +L+ +A +K DL P
Sbjct: 424 RLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLT-SHPSVAGHLLK--DL----PG 476
Query: 1186 LKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ + P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +
Sbjct: 477 VTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAV 536
Query: 1244 ITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
I PYN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L +
Sbjct: 537 IAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAED 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 594 RRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|423345058|ref|ZP_17322747.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
gi|409222844|gb|EKN15781.1| hypothetical protein HMPREF1060_00419 [Parabacteroides merdae
CL03T12C32]
Length = 639
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 220/465 (47%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL AKD +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIGRHEVVH--------------------------------------- 1025
KL + I +RIG ++
Sbjct: 249 SEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKS 308
Query: 1026 ---KEIQKHCLSAMNINSVE-EIK---KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
KE ++ LS + + E E+K + D+ +VVA T +G N +LT++ F +DE
Sbjct: 309 HGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 368
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L +++++ P+ +S
Sbjct: 369 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKPETVSL 428
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L++QYRM + IM + Y D L E+ + I D PV++
Sbjct: 429 LKTQYRMNEDIMRFPSRWFYHDELQSAP-EVKHRGILEFDT---------------PVVW 472
Query: 1199 VNTDMLPAYEAK--DHQTLNNPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
++T E + D + N EA L I KI +E V + E D G+I+PY
Sbjct: 473 LDTADCHFEEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLD--ESIDFGLISPYK 530
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
SQ IR + + + HT+D +QG+++D I++S VR+++ R LGD
Sbjct: 531 SQVQYIRGLIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGR---IGFLGD 587
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ K L + E ++
Sbjct: 588 LRRMNVAITRARMKLMILGDAPTLTRHAFYKELYEYIWENGQVIT 632
>gi|395741719|ref|XP_002820935.2| PREDICTED: DNA2-like helicase-like, partial [Pongo abelii]
Length = 628
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 260/554 (46%), Gaps = 86/554 (15%)
Query: 412 DWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
DW + PGD +++ G+ + ++ +LI++PD+L+SGT +A+S C RR+VL
Sbjct: 115 DWCSVPVEPGDIIHLEGDCTSDTWI-IDKDFGYLILYPDMLISGTSIASSIRCMRRAVLS 173
Query: 472 ERLKCSERSI-SALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVN 528
E + S+ + L+GT+LH++FQ + K L+E A +Q ++++ +Y ++
Sbjct: 174 ETFRSSDPATRQMLIGTVLHEVFQKAINNSFAPEK-LQELAFQTIQEIRHLKEMYRLNLS 232
Query: 529 ENDIHKTLVEAIPKMLNWIILF---KDSQDLNTPTVDFGSDGLK-----KLKISEVTDIE 580
+++I + + + +P W F S D + SD K +++ + DIE
Sbjct: 233 QDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPMDIE 292
Query: 581 EMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVILYT 640
E W+P++GLKG ID ++ VKI + + I+PLE KTGK N S+EHR+QV+LYT
Sbjct: 293 ESIWSPRFGLKGKIDVTVGVKIH-RGYKTKYKIMPLELKTGKESN---SIEHRSQVVLYT 348
Query: 641 LLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKASTTQQ 696
LL ER ++GLL YL++ Q V D L+ RN+ A + I K++T Q+
Sbjct: 349 LLSQERRADP-EAGLLLYLKTGQMYPVPANHLDKRELLKLRNQMAFSLFHRISKSATRQK 407
Query: 697 -----LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLTTAH 728
LP ++ K CS +GN + HL H
Sbjct: 408 TQLASLPQIIEEEKTCKYCSQIGNCALYSRAVEQQMDGSSVPIVMLPKIEEETQHLKQTH 467
Query: 729 CSFLRHWDRLIDLEAKEMQVVKNE--IWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDN 786
+ W ++ LE++ KN IW S C+ +++ EH K D
Sbjct: 468 LEYFSLWCLMLTLESQSKDNKKNHQNIWLMPASEMEKSGSCIGNLI---RMEHVKIVCDG 524
Query: 787 RFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRL-AVASGL 845
+++++F +H AIP + L +GD VI+S E L A++ G
Sbjct: 525 QYLHNFQHKH----------------GAIPVTN----LMAGDRVIVSGEERSLFALSRGY 564
Query: 846 ITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQ 905
+ EI+ V+ L RN S +S L +R+D++E + NL +L
Sbjct: 565 VKEINMTTVTC-------LLDRNWSVLPESTL---FRLDQEEKNCDIDIPLGNLSKLMEN 614
Query: 906 SAQSSQLRRMIVDL 919
+ S +LR +I+D
Sbjct: 615 TFVSKKLRDLIIDF 628
>gi|74210936|dbj|BAE25072.1| unnamed protein product [Mus musculus]
Length = 860
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 271/582 (46%), Gaps = 89/582 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V+V+F + L L N+
Sbjct: 82 SFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT--------- 132
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+ K ++ ++ L+ L S +S L +++ P S + P LS
Sbjct: 133 --YRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLS 185
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +
Sbjct: 186 FYNT--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPS 243
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV- 1051
N AVDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 244 NIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVF 303
Query: 1052 -----------------------------------------KVVAVTCLGITN----PLL 1066
VV T G ++ LL
Sbjct: 304 GKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLL 363
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL
Sbjct: 364 PEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLME 423
Query: 1127 RLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL+E+H + L QYRM Q IM ++ +Y +L+ +A +K DL P
Sbjct: 424 RLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQLTS-HPSVAGHLLK--DL----PG 476
Query: 1186 LKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ + P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +
Sbjct: 477 VTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAV 536
Query: 1244 ITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
I PYN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L +
Sbjct: 537 IAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAED 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 594 RRINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|423723542|ref|ZP_17697691.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
gi|409241252|gb|EKN34022.1| hypothetical protein HMPREF1078_01678 [Parabacteroides merdae
CL09T00C40]
Length = 639
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 220/465 (47%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL AKD +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 189 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIGRHEVVH--------------------------------------- 1025
KL + I +RIG ++
Sbjct: 249 SEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKS 308
Query: 1026 ---KEIQKHCLSAMNINSVE-EIK---KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
KE ++ LS + + E E+K + D+ +VVA T +G N +LT++ F +DE
Sbjct: 309 HGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 368
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L +++++ P+ +S
Sbjct: 369 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKPETVSL 428
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L++QYRM + IM + Y D L E+ + I D PV++
Sbjct: 429 LKTQYRMNEDIMRFPSRWFYHDELQSAP-EVKHRGILEFDT---------------PVVW 472
Query: 1199 VNTDMLPAYEAK--DHQTLNNPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
++T E + D + N EA L I KI +E V + E D G+I+PY
Sbjct: 473 LDTADCHFEEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLD--ESIDFGLISPYK 530
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
SQ IR + + + HT+D +QG+++D I++S VR+++ R LGD
Sbjct: 531 SQVQYIRGLIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGR---IGFLGD 587
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ K L + E ++
Sbjct: 588 LRRMNVAITRARMKLMILGDAPTLTRHAFYKELYEYIWENGQVIT 632
>gi|409099302|ref|ZP_11219326.1| ATPase AAA [Pedobacter agri PB92]
Length = 637
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 215/454 (47%), Gaps = 89/454 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN+ Q++A+ K++TA A++ G PGTGKT+T+VHA+K+L IL+ + +N+AVD
Sbjct: 181 LNESQQQAVHKIVTANHLAIVHGPPGTGKTTTLVHAIKSLTKHYDQKILVVAPSNTAVDL 240
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVK------ 1052
L KL ++ ++ +RIG V + L ++ SV+ +KK+ ++ K
Sbjct: 241 LTEKLAAEGLNVIRIGNPARVSDRLLASTLEHKMADHPDMKSVKSLKKQANEFKNMAHKY 300
Query: 1053 ------------------------------------------VVAVTCLGITNPLLTDKK 1070
++ T +G + + + K
Sbjct: 301 KRSFGKAERDQRKALFDEAHKIGKEVEKTEQYIMDNLFSKAQIITATLVGANHYTVRNLK 360
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++ ++DEAGQ P P++ A K VL GDH+QL P ++S+EA NG+ +L +
Sbjct: 361 YNTVVIDEAGQALEPACWIPILKAEKVVLAGDHFQLSPTIKSSEAGRNGLSKTLLEKSVS 420
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
HP+++ L QYRM + IM S+ + Y +L +A + D
Sbjct: 421 LHPESVVLLNEQYRMHESIMGYSSQVFYNSQLHA-HHAVARHLVFADD------------ 467
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD-------IGI 1243
P+ F++T E D + NP EA + L++ E+E K+ I I
Sbjct: 468 ---EPLAFIDTAGCSFDEKLDGTSTTNPDEATFLVTHLSALIQ-ELESKETIVDFPSIAI 523
Query: 1244 ITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
++PY Q +++ + + + ++TID +QG+++D + +S RS+ + +
Sbjct: 524 VSPYKQQVQIVKMLVEENELLMAHQDKISVNTIDSFQGQERDVVYISLTRSNA---DGSI 580
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
L D R+NVA+TRA+KKL+++G TLSK
Sbjct: 581 GFLADTRRMNVAMTRARKKLVVIGDSATLSKAKF 614
>gi|326505658|dbj|BAJ95500.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 152/516 (29%), Positives = 244/516 (47%), Gaps = 78/516 (15%)
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLF--LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDP 934
L+ R++K ++ M+ L+QL +Q+ S+ L ++ F S
Sbjct: 137 LNSPLRLEKLANEVTYRRMKDALIQLSKGIQAGPSANLVPVL-------FGENSPMRSKD 189
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
A+ + K+L+D Q+ AI K L ++D L+ G PGTGKT+T++ + + RGA IL
Sbjct: 190 AVKFSPFNKNLDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGAKILAC 249
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIG------------------------------RHEVV 1024
+ +N AVDN++ +L VR+G R E+
Sbjct: 250 AASNIAVDNIVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEM- 308
Query: 1025 HKEIQKHCLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPL 1065
K + L A + N+ +I+K L D +K VV T G ++
Sbjct: 309 -KVLNSKLLKAKDRNTKRDIRKELKTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKK 367
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
+ FD+ I+DEA Q L+ ++ VL GDH QLPP +QS EA + GM +LF
Sbjct: 368 IAGISFDLVIIDEAAQALEVACWIALLKGARCVLAGDHLQLPPTIQSVEAEKKGMGKTLF 427
Query: 1126 RRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL+E + I S L QYRM + IM S+ +Y +++ S + + ++ S
Sbjct: 428 ERLTEGYGDEITSMLTVQYRMHELIMNWSSKELYSNKIKAHSSVAGHMLYDLEGVNKSS- 486
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ P +I V+T E KD + T+N A IA + LV++ + DIG
Sbjct: 487 ----STEPT--IILVDTTGCDMEEVKDEEESTMNEGEAAVSIAH-AKLLVESGVRASDIG 539
Query: 1243 IITPYNSQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
IITPY++Q ++ + +EI T+D +QGR+K+ I++S VRS++ L
Sbjct: 540 IITPYSAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNQKKE---VGFL 596
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+++ +V T+S LK L+
Sbjct: 597 SDHRRMNVAVTRARRQCCVVCDAETVSSDRFLKRLV 632
>gi|410908195|ref|XP_003967576.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Takifugu rubripes]
Length = 998
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 159/554 (28%), Positives = 262/554 (47%), Gaps = 82/554 (14%)
Query: 841 VASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLV 900
V +G++T +S+ VSV+F G + +DA L+ + ++ D ++ M+ L
Sbjct: 100 VGTGIVTRVSQASVSVAFDDTK--DGISFDTDA---LYNLLKLAND---VTYKRMKKALN 151
Query: 901 QL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTA 959
+L + + L ++ P S FSQ + K+L+D QR A+ LT
Sbjct: 152 ELNSYSNGPAGNLINVLFGETKP-----SCFSQSNETEFF--NKNLDDSQREAVTFALTQ 204
Query: 960 KDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
+D A+I G PGTGKT+T+V + + +G +L + +N AVDNL+ +L I +R+G
Sbjct: 205 RDLAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCAPSNVAVDNLVERLAQCKIKVLRLG 264
Query: 1020 RHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV----------------------- 1051
+ + IQKH L A+ N + + +I+K +D+
Sbjct: 265 HPARLLESIQKHSLDAIIAQSSNADIISDIRKDIDKAFVGLKKMHNKGERASFKREITEL 324
Query: 1052 -------------------KVVAVTCLGITN--PL--LTDKKFDVCIMDEAGQTTLPVSL 1088
VV T G + PL L + FD ++DE Q
Sbjct: 325 RKELKSRETTAITQILKSADVVLSTNTGACDDGPLKFLPAEHFDWVVIDECAQALESSCW 384
Query: 1089 GPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA-ISALQSQYRMCQ 1147
L+ A K VL GD+ QLPP ++S +A G+ +SL RL + + + L QYRM
Sbjct: 385 IALLRARKCVLAGDYKQLPPTIKSQKAAVKGLSVSLMERLIQMYGDTVVRMLTVQYRMNG 444
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD--MLP 1205
IME ++ +Y +L+ S ++ + DL P + ++ ++T L
Sbjct: 445 AIMEWASDQMYQGKLTAHSSVESHL---LKDL----PGVACVEETSTSMLLIDTAGCGLN 497
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SV 1263
E D Q+ N E ++A + L + ++ KDI +I PYN Q +L+R LSV ++
Sbjct: 498 EMEVADEQSKGNEGEVDIVALHIKALTEAGLKAKDIAVIAPYNLQVDLLRQRLSVRHPAL 557
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI ++D +QGR+K+ +++S VRS+ R L + RINVA+TRA++ + +V RT
Sbjct: 558 EIKSVDGFQGREKEAVVLSLVRSN---RKGEVGFLAEDRRINVAVTRARRHIAIVCDTRT 614
Query: 1324 LSKVPLLKLLINKV 1337
+ LK LI+ V
Sbjct: 615 VQNHAFLKSLIDHV 628
>gi|154492784|ref|ZP_02032410.1| hypothetical protein PARMER_02423 [Parabacteroides merdae ATCC 43184]
gi|154087089|gb|EDN86134.1| putative DNA helicase [Parabacteroides merdae ATCC 43184]
Length = 640
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 220/465 (47%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL AKD +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 190 LNLSQEEAVNHVLAAKDVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 249
Query: 1005 LIKLKSQSIDFVRIGRHEVVH--------------------------------------- 1025
KL + I +RIG ++
Sbjct: 250 SEKLVDRGIHVLRIGNPTRINDKMLSFTYERRFESHPDYAELWGIRKAIREIQSNLRKKS 309
Query: 1026 ---KEIQKHCLSAMNINSVE-EIK---KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
KE ++ LS + + E E+K + D+ +VVA T +G N +LT++ F +DE
Sbjct: 310 HGEKETARNRLSRLRFRATELEVKIDTELFDEARVVACTLVGSANRVLTNRNFTTLFIDE 369
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L +++++ P+ +S
Sbjct: 370 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAARGGLDHTLMQKITDRKPETVSL 429
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L++QYRM + IM + Y D L E+ + I D PV++
Sbjct: 430 LKTQYRMNEDIMRFPSRWFYHDELQSAP-EVKHRGILEFDT---------------PVVW 473
Query: 1199 VNTDMLPAYEAK--DHQTLNNPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
++T E + D + N EA L I KI +E V + E D G+I+PY
Sbjct: 474 LDTADCHFEEDRLDDSMSRINRDEATLLVSTLQKYIEKIGKERVLD--ESIDFGLISPYK 531
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
SQ IR + + + HT+D +QG+++D I++S VR+++ R LGD
Sbjct: 532 SQVQYIRGLIKRDTFFKPFRRLITAHTVDGFQGQERDVIMISLVRANDKGR---IGFLGD 588
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ K L + E ++
Sbjct: 589 LRRMNVAITRARMKLMILGDAPTLTRHAFYKELYEYIWENGQVIT 633
>gi|311746247|ref|ZP_07720032.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
gi|126576477|gb|EAZ80755.1| DNA-binding protein SMUBP-2 [Algoriphagus sp. PR1]
Length = 642
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 146/527 (27%), Positives = 242/527 (45%), Gaps = 104/527 (19%)
Query: 890 TSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDD 948
S+ M + L ++ ++ + +L+ +++ +AP+F+ + + +P +LN
Sbjct: 137 ASYREMEFALKKMMSEENKRVEELKHVLLGEKAPQFND-TPYKSNP---------NLNFS 186
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
Q +A + AKD A++ G PGTGKT+T++ A++ + G SIL+++ +N+AVD L+ KL
Sbjct: 187 QNQACQLISNAKDVAVVHGPPGTGKTTTLIEAIEQAVTAGQSILVSAPSNAAVDLLVEKL 246
Query: 1009 KSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQ------------- 1050
Q I+ +R+G V ++I L A + +++++K DQ
Sbjct: 247 IDQGIETLRLGHPARVEEKILNQTLDAKTAFHSSYRDLKKLRKETDQYLKLAKQYKRKFG 306
Query: 1051 -----------------------------------VKVVAVTCLGITNPLLTDKKFDVCI 1075
KV A T +G ++ L +FDV
Sbjct: 307 PEERAQRKLMYAEVSRLREASKSLEEYIQYDIFQKTKVFASTLVGASSYSLKGMEFDVVF 366
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q + P++ A K V GDH QLPP ++S +A + G+ +LF ++ QA
Sbjct: 367 IDEAAQGLEAATWIPILKAKKVVFAGDHCQLPPTIKSYQAAQEGLAETLFEKVIARKSQA 426
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
LQ QYRM + IM SN Y L N K+ P + L
Sbjct: 427 SQMLQVQYRMPEVIMGFSNEQFYKGELQAAE----NTKL------HTFPGEDQQLE---- 472
Query: 1196 VIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN------EIEGKDIGIITPY 1247
+++T + K+ ++L+ NP EA + E++ + EG IG+I PY
Sbjct: 473 --WIDTAGAGYNDQKEAESLSTCNPEEAAFACRYLNEMIVRIGIGNFKQEGWTIGLIAPY 530
Query: 1248 NSQANLIRHSLSVSSVE------------IHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
+Q L+R SL E I T+D +QG+++D +L+S RS+E
Sbjct: 531 GAQVRLLR-SLIFEGFEYPNLKAFSDLITIDTVDGFQGQERDLMLISLTRSNEKGE---I 586
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
L D R+NVALTRAK+KL++VG TL+ P L+ + +G
Sbjct: 587 GFLADERRMNVALTRAKRKLVLVGDSSTLALNPFFDQLLQYFEKNNG 633
>gi|343415926|emb|CCD20512.1| hypothetical protein, conserved (fragment) [Trypanosoma vivax Y486]
Length = 794
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 211/446 (47%), Gaps = 62/446 (13%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAV 1001
K LN+ Q+ A +K + + LI G PGTGKTST V ++ LL+R + +L+ + +N+AV
Sbjct: 344 KGLNESQQ-AAVKAALSNAFTLIQGPPGTGKTSTSVQIIRQLLLRKKTRVLVCAPSNAAV 402
Query: 1002 DNLLIKLKSQSIDFVRI----------GR--------HEVVH--------KEIQKHCLSA 1035
D+L + IDF+R+ GR E++ ++I K L +
Sbjct: 403 DHLSESMYKNKIDFIRVQPRYREENDSGRPYTLGSRVREIMEAMPLNRKKRDIVKRALES 462
Query: 1036 MNINSVEE----------IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
++ E+ +KK L + +VVA TC+G + L K D ++DEA Q T P
Sbjct: 463 GRLSEEEKQLCQKLEDRAVKKILAETRVVACTCIGAGSRWLRGFKADFVLIDEASQATEP 522
Query: 1086 VSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
+L PL K V LVGDH QL P+V S A + G SLF RL+ + I+ L QYR
Sbjct: 523 ETLVPLFRGEKQVALVGDHRQLGPVVLSNVAGKKGFARSLFERLAGAGSE-ITQLNLQYR 581
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML 1204
I S+ YG + + + D S PW NP +P++F + +
Sbjct: 582 THPFIYRFSSMAFYGGTV------LDGVPAEKRDASGIFPW----PNPEKPMLFYDCSGV 631
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL------ 1258
LN I+ + L + ++GII+PY +Q +R L
Sbjct: 632 EEVGDSGASFLNEAEARATISVVDAVLESGAVRPDEVGIISPYRAQCEYMRERLLQWGTA 691
Query: 1259 ---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
VEI T+D YQGR+K+ I++S VR++E T +GD R+NV+LTRA++ L
Sbjct: 692 GKDIYEKVEISTVDAYQGREKEIIILSCVRNNEER---TVGFIGDERRLNVSLTRARRGL 748
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQS 1341
I +G L L+ +GE S
Sbjct: 749 IAIGKAEALRGDKCWSKLLLYMGEHS 774
>gi|71122324|gb|AAH99790.1| Ighmbp2 protein [Rattus norvegicus]
Length = 869
Score = 180 bits (456), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 270/581 (46%), Gaps = 87/581 (14%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V V+F + L L N+ +
Sbjct: 82 SFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENT--------Y 133
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ ++ D +T + + L S +S L +++ P S ++ P L++
Sbjct: 134 RLLKLAND--VTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTP-----SPATEIPPLTF 186
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 187 Y--NTTLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN 244
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-- 1051
AVDNL+ +L +R+G + + +Q+H L A+ N V +I++ +DQV
Sbjct: 245 IAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFG 304
Query: 1052 ----------------------------------------KVVAVTCLGITN----PLLT 1067
VV T G + LL
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLP 364
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL R
Sbjct: 365 EDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMER 424
Query: 1128 LSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+E+H A + L QYRM Q I ++ +Y +L+ +A +K DL P +
Sbjct: 425 LAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLTA-HPSVAGHLLK--DL----PGV 477
Query: 1187 KEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PYN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L +
Sbjct: 538 APYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDR 594
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 595 RINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|13928794|ref|NP_113774.1| DNA-binding protein SMUBP-2 [Rattus norvegicus]
gi|81917357|sp|Q9EQN5.1|SMBP2_RAT RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Antifreeze enhancer-binding protein ortholog;
Short=AEP
gi|11066349|gb|AAG28561.1|AF199411_1 antifreeze-enhancer binding protein AEP [Rattus norvegicus]
Length = 988
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 271/581 (46%), Gaps = 87/581 (14%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V V+F + L L N+ +
Sbjct: 82 SFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENT--------Y 133
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ ++ D +T + + L S +S L +++ P S ++ P L++
Sbjct: 134 RLLKLAND--VTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTP-----SPATEIPPLTF 186
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 187 YNT--TLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN 244
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-- 1051
AVDNL+ +L +R+G + + +Q+H L A+ N V +I++ +DQV
Sbjct: 245 IAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFG 304
Query: 1052 ----------------------------------------KVVAVTCLGITN----PLLT 1067
VV T G + LL
Sbjct: 305 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLP 364
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL R
Sbjct: 365 EDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMER 424
Query: 1128 LSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+E+H A + L QYRM Q I ++ +Y +L+ +A +K DL P +
Sbjct: 425 LAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLT-AHPSVAGHLLK--DL----PGV 477
Query: 1187 KEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I
Sbjct: 478 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 537
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PYN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L +
Sbjct: 538 APYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDR 594
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 595 RINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 635
>gi|327402000|ref|YP_004342839.1| DNA helicase [Archaeoglobus veneficus SNP6]
gi|327317508|gb|AEA48124.1| DNA helicase [Archaeoglobus veneficus SNP6]
Length = 664
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/281 (38%), Positives = 159/281 (56%), Gaps = 16/281 (5%)
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
+VV T L+ D +FDV ++DEA Q T+P L P+ +FVL GDH QLPP V
Sbjct: 358 QVVLATNSSAALELIKDVEFDVAVIDEASQATIPSVLIPISKTRRFVLAGDHKQLPPTVL 417
Query: 1112 STEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
S EA E + +LF +L E +P+ L+ QYRM + +ME + YG RL D + N
Sbjct: 418 SQEAAE--LSETLFEKLIEAYPENSKMLEVQYRMNKKLMEFPSREFYGGRLKA-DDSVRN 474
Query: 1172 AKIKVSDLSSCSP---WLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIA 1225
I ++DL P + E L P++F++T + K + N +EA +I
Sbjct: 475 --ITLADLGVKEPKFGFWNEVLG-SEPLVFIDTSKCADRWERQRKGSPSRENELEARIIK 531
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLI-RHSLSVSSVEIHTIDKYQGRDKDCILVSFV 1284
++ + L+K ++ IG+ITPY+ Q +LI R+ + +E+ T+D YQGR+KD I++SFV
Sbjct: 532 ELVERLLKIGVKAGQIGVITPYDDQVDLIKRYIKGIEEIEVKTVDGYQGREKDVIIISFV 591
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
RS+E L D R+NV+LTRA++KLI +G TLS
Sbjct: 592 RSNE---RGEVGFLDDLRRLNVSLTRARRKLIAIGDTETLS 629
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 912 LRRMIVDLE--------APRFDSGSVFSQDP-ALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
L+RMI +LE RF G + P A+++ + LN+ QR A+ L ++D+
Sbjct: 129 LKRMIENLEKLSESGKRTLRFLLGIERPRKPKAVNFEPFDNKLNESQREAVSLALGSRDF 188
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG 1019
LI G GTGKT T+ + + RG +L T+ +N AVDNL+ +L + + VR+G
Sbjct: 189 FLIHGPFGTGKTRTLTELILQEVKRGNKVLATAESNVAVDNLVERLAGK-VRLVRLG 244
>gi|152990986|ref|YP_001356708.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
gi|151422847|dbj|BAF70351.1| DNA/RNA helicase [Nitratiruptor sp. SB155-2]
Length = 726
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 167/286 (58%), Gaps = 23/286 (8%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
++ VV T I + +L + FDV ++DE Q +P +L P+M A++F++ GDH QLP
Sbjct: 423 IENADVVLSTNGMIMSDMLKNFHFDVAVIDEGSQQIIPSTLIPIMHANRFIIAGDHKQLP 482
Query: 1108 PLV--QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
P V S E +E SLF +L ++P+ S L+ QYRM + IM+ SN Y +L
Sbjct: 483 PTVVSDSKELKE-----SLFEKLIIQYPKNASMLRIQYRMHEKIMQFSNEQFYEGKL--- 534
Query: 1166 SDEIANAKIK---VSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE--AKDHQTLNNPVE 1220
IA+A +K + D P EA+ C P++FV+T + A E A+ + N E
Sbjct: 535 ---IADASVKHHTICDFELKEPKRFEAILGCEPLVFVDTKGVEAKEMLAQRSTSYENEKE 591
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKDC 1278
A +++ +++EL+ ++ +DIGII+PY +Q I+ + +E+ T+D +QGR+K+
Sbjct: 592 AKIVSALSEELLSMGLKTEDIGIISPYAAQVKRIKKLVETDERIIEVKTVDGFQGREKEV 651
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
I++SFVRS+EN + L D R+NVA+TRAK+KLI +G TL
Sbjct: 652 IIISFVRSNENGK---IGFLKDLRRLNVAITRAKRKLICIGDASTL 694
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 22/237 (9%)
Query: 820 MDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE 879
+D + SGD V++S + +G ++E+ + ++V+F + P + D
Sbjct: 134 IDTEIGSGDIVLISRGEPLKSDVTGTVSEVRKNFITVAFEEK---PPKWVYGDG------ 184
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
RID +F M NL LQ A Q RRM F G ++P
Sbjct: 185 -IRIDLYINDVTFKRMEENL--HLLQHATGVQ-RRM------RNFALGIWEPKEPKKQSF 234
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
LN+ Q A+ K L ++ + LI G PGTGKTST++ + + RG +L T+ +N+
Sbjct: 235 EVVTKLNESQNEAVQKALGSEVF-LIHGPPGTGKTSTLIELILQEVKRGNKVLATADSNT 293
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSV--EEIKKRLDQVKVV 1054
AVDN+L +L S I VRIG + E+++ + A S+ E IKK +++ V+
Sbjct: 294 AVDNMLQRLASHDISLVRIGHPARILYELEEFSIHAKYEKSLEAEAIKKGWEEIGVL 350
>gi|435853073|ref|YP_007314392.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
gi|433669484|gb|AGB40299.1| DNA helicase, putative [Halobacteroides halobius DSM 5150]
Length = 750
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 180/313 (57%), Gaps = 20/313 (6%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E + + +++ +VV T + +L ++ FD+ ++DEA Q+T P +L P++ ++K +LVG
Sbjct: 445 EAVTELIEEAEVVCTTNSTAGSEVLAEQNFDLLLIDEATQSTEPAALIPVVKSNKVILVG 504
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGD 1160
DH QLPP + + EA G+ SLF RL E H I L QYRM Q IM S++ Y
Sbjct: 505 DHKQLPPTILNEEAARKGLSKSLFERLLEVHGAKIKEILNVQYRMNQAIMNFSSSQFYDQ 564
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR-------PVIFVNTDML--PAYEAKD 1211
+L +A K+K +++ + L + +P V+F++T + P Y D
Sbjct: 565 QL------VAAKKVKEWNITDLNIQLPKGNSPAEKVLKIKDAVVFLDTSGMSAPEYTKGD 618
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKY 1271
+L N +EA L+++I + V +I+ ++ +ITPY Q +LI+ + + VE++T+D +
Sbjct: 619 STSLQNRIEAELVSEIINQTVNTKIDLSEVAVITPYKDQVDLIKQLIKLEEVEVNTVDGF 678
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
QGR+K+ +++S VRS++ L D R+NV+LTRAKKKLI++G T++ +
Sbjct: 679 QGREKELVILSLVRSNQQD---NIGFLRDIRRLNVSLTRAKKKLIILGDSSTITSHETYQ 735
Query: 1332 LLINKVGEQSGIL 1344
L+ + E++G L
Sbjct: 736 SLVEYI-EKNGYL 747
Score = 66.2 bits (160), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
F+Q P + Y K LND QR+A+ L AKD+ L+ G PGTGKT T + ++
Sbjct: 250 FNQLPKIDYY--NKDLNDSQRQAVRSALAAKDFFLVHGPPGTGKTMTSIEILQQEAGE-K 306
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
+IL T+ +N+AVDNL+ +L ++ + +R+G V+ ++++ L
Sbjct: 307 NILATADSNTAVDNLVERLVARGVKVLRVGHPARVNSLVREYTL 350
>gi|242399980|ref|YP_002995405.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
gi|242266374|gb|ACS91056.1| DNA helicase, UvrD/REP family [Thermococcus sibiricus MM 739]
Length = 716
Score = 179 bits (455), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 164/292 (56%), Gaps = 11/292 (3%)
Query: 1051 VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV 1110
V VV T + D +FDV I+DEA Q T+P L P+ A +FVL GDH QLPP +
Sbjct: 416 VDVVLSTNSSAALEFIKDAEFDVAIIDEASQATIPSVLIPIAKARRFVLAGDHKQLPPTI 475
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC-GS-DE 1168
S EAR + +LF +L E +P L+ QYRM Q +ME + Y ++ GS +
Sbjct: 476 LSEEAR--ALSETLFEKLIELYPFKAKMLEIQYRMNQLLMEFPSREFYNGKIKADGSVKD 533
Query: 1169 IANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT-DMLPAYEA--KDHQTLNNPVEACLIA 1225
I A +KV + PW L P+IFV+T + +E K + NP+EA L+
Sbjct: 534 ITLADLKVREPFFGEPW-DSILKREEPLIFVDTSNRTDKWERQRKGSTSRENPLEALLVR 592
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVR 1285
+I + L++ I+ + IGIITPY+ Q + IR + +EIHT+D YQGR+K+ I++S VR
Sbjct: 593 EIVERLLRMGIKKEWIGIITPYDDQVDSIRSIIQDDEIEIHTVDGYQGREKEIIILSLVR 652
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
S+ + L D R+NV++TRAK+KL+++G TL K LI+ V
Sbjct: 653 SN---KKGELGFLMDLRRLNVSITRAKRKLVVIGDSETLVNHETYKRLIHFV 701
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+++LN Q+ A+ L ++D+ LI G GTGKT T+V + + RG IL T+ +N AV
Sbjct: 227 DRNLNQSQKEAVSYALGSEDFFLIHGPFGTGKTRTLVELIVQEVKRGNKILATAESNVAV 286
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKK 1046
DNL+ +L + + VR+G V +++ L A + S E +K
Sbjct: 287 DNLVERLWGK-VKLVRLGHPSRVSVHLKESTL-AFQVESHERYRK 329
>gi|410028927|ref|ZP_11278763.1| type III restriction enzyme, res subunit [Marinilabilia sp. AK2]
Length = 642
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 141/471 (29%), Positives = 216/471 (45%), Gaps = 93/471 (19%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
++LN Q+ A+ V +AKD A+I G PGTGKT+T+VHAV L +L+ + +N+AVD
Sbjct: 181 ENLNPSQQEALGLVASAKDVAIIHGPPGTGKTTTLVHAVSYSLEHNKQVLVCAPSNAAVD 240
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-------------------------- 1036
L+ KL+ + + +RIG V I L A
Sbjct: 241 LLVEKLRERGLSTLRIGHPARVEDHILSQTLDAKVALHDSYKDLKRLKKKADEFRKLGQK 300
Query: 1037 ---NINSVEEIKKR------------------------LDQVKVVAVTCLGITNPLLTDK 1069
+ E I+KR Q +V A T +G +N L
Sbjct: 301 YKRSFGPEERIQKRRLFDEVNRLKDEGEHLEEYIQYDIFQQTQVFATTLVGASNSALKGM 360
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF + +DEA Q + P+ A V+ GDH+QLPP ++S EA NG+ +LF ++
Sbjct: 361 KFPLVFIDEAAQGLEAATWIPIQKAQAVVMAGDHFQLPPTIKSYEAAMNGLSETLFEKVI 420
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ P A LQ QYRM + IM SN + Y N + +D +S K
Sbjct: 421 KRQPLASKMLQLQYRMPELIMGFSNQMFY------------NHGLIAADNTS-----KHY 463
Query: 1190 LNPCRPVI-FVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN------EIEGKD 1240
L+ PV+ FV+T EA + ++L+ N EA + ++L+K + +G +
Sbjct: 464 LSEEEPVLEFVDTAGSGFLEAVEEESLSTFNQEEANFALQCLEDLLKRTGIAKMKEKGWN 523
Query: 1241 IGIITPYNSQANLIRHSLSVSS-----------VEIHTIDKYQGRDKDCILVSFVRSSEN 1289
IG+I PY +Q + L S + I +ID +QG+++D IL+S VRS+
Sbjct: 524 IGVIAPYRAQVRKLNELLFESYAFPNLRSFSELLTIDSIDGFQGQERDIILISLVRSNAK 583
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L D R+NV LTRAK+KL+++G TL P + + + E+
Sbjct: 584 GE---IGFLADIRRMNVGLTRAKRKLVVIGDSATLGSHPFYRSFFDYIEEK 631
>gi|389852292|ref|YP_006354526.1| DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
gi|388249598|gb|AFK22451.1| putative DNA2-NAM7 helicase family protein [Pyrococcus sp. ST04]
Length = 633
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 167/284 (58%), Gaps = 20/284 (7%)
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
K+DV I+DEA Q+T+P L PL +F+L GDH QLPP + S EA+E + +LF L
Sbjct: 349 KYDVAIVDEATQSTIPSILIPLNKVDRFILAGDHKQLPPTILSLEAQE--LSKTLFEGLI 406
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVSDLSSCSPW 1185
E +P L QYRM + IME + YG ++ S + +A+ IK+ + W
Sbjct: 407 ERYPWKSEMLTIQYRMNERIMEFPSKEFYGGKIKAHESVKNITLADLGIKIEE----ENW 462
Query: 1186 LKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
KE L+P ++F++T L + + ++ NP+EA ++AKI ++L+ ++ + IG
Sbjct: 463 -KEVLDPKTVLVFIDTSKLENKWERQRRGSESRENPLEAKIVAKIVKKLLNAGVKPEWIG 521
Query: 1243 IITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ITPY+ Q +LI S+SV VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 522 VITPYDDQRDLI--SMSVPEEVEVKTVDGYQGREKEVIILSFVRSN---KKGEIGFLKDL 576
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NV+LTRAK+KLIMVG TLS K +I V + I+
Sbjct: 577 RRLNVSLTRAKRKLIMVGDSSTLSSHETYKRMIEHVRKYGRIIE 620
Score = 69.3 bits (168), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+KSLN Q++AI + L ++D+ LI G GTGKT +V ++ + RG +L T+ +N AV
Sbjct: 140 DKSLNSAQKKAISRALGSEDFFLIHGPFGTGKTRALVELIRQEIKRGNKVLATAESNVAV 199
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DNL+ +L + + VR+G V +E+ + L+ +
Sbjct: 200 DNLVERLAREGVKIVRVGHPSRVSRELHETTLAYL 234
>gi|149061856|gb|EDM12279.1| immunoglobulin mu binding protein 2, isoform CRA_a [Rattus
norvegicus]
Length = 1003
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 271/581 (46%), Gaps = 87/581 (14%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V V+F + L L N+ +
Sbjct: 97 SFTSGDIVGLYDTNESSQLATGVLTRITQKSVIVAFDESHDFQLNLDRENT--------Y 148
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ ++ D +T + + L S +S L +++ P S ++ P L++
Sbjct: 149 RLLKLAND--VTYKRLKKALLTLKKYHSGPASSLIDVLLGGSTP-----SPATEIPPLTF 201
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +N
Sbjct: 202 YNT--TLDPSQKEAVSFALAQKEVAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN 259
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-- 1051
AVDNL+ +L +R+G + + +Q+H L A+ N V +I++ +DQV
Sbjct: 260 IAVDNLVERLALCKKQILRLGHPARLLESVQQHSLDAVLARSDNAQIVADIRRDIDQVFG 319
Query: 1052 ----------------------------------------KVVAVTCLGITN----PLLT 1067
VV T G + LL
Sbjct: 320 KNKKTQDKREKSNFRNEIKLLRKELKEREEAAIVQSLSAADVVLATNTGASTDGPLKLLP 379
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FDV ++DE Q PL+ A K +L GDH QLPP S +A G+ SL R
Sbjct: 380 EDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHKQLPPTTVSHKAALAGLSRSLMER 439
Query: 1128 LSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L+E+H A + L QYRM Q I ++ +Y +L+ +A +K DL P +
Sbjct: 440 LAEKHGAAVVRMLAVQYRMHQAITRWASEAMYHGQLT-AHPSVAGHLLK--DL----PGV 492
Query: 1187 KEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +I
Sbjct: 493 ADTEETSVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAVI 552
Query: 1245 TPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PYN Q +L+R SLS +EI ++D +QGR+K+ ++++FVRS+ R L +
Sbjct: 553 APYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVILTFVRSN---RKGEVGFLAEDR 609
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ LK L++ E +
Sbjct: 610 RINVAVTRARRHVAVICDSHTVNNHAFLKTLVDYFTEHGEV 650
>gi|357060587|ref|ZP_09121355.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
gi|355375892|gb|EHG23160.1| hypothetical protein HMPREF9332_00912 [Alloprevotella rava F0323]
Length = 640
Score = 179 bits (455), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/448 (29%), Positives = 212/448 (47%), Gaps = 67/448 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ VL A+D ++ G PGTGKT+T+V A+ ++ R +++ + +N AVD +
Sbjct: 182 LNASQEQAVNDVLAARDLMIVHGPPGTGKTTTLVEAIMEVMRREPQVMVCAQSNMAVDWI 241
Query: 1005 LIKLKSQSIDFVRIG--------------------------------------------R 1020
+L + + +RIG R
Sbjct: 242 SEQLADRGVSVLRIGNPSRVTDKMLSFTYERRFESHPDYSTLWSIRRTIRQLYATPRKGR 301
Query: 1021 HEVVHKEIQKHCLSAMNINSVEEIKKR---LDQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
E H++I + A + E++ R DQ +VVA T +G N LL F +D
Sbjct: 302 SESFHQKITRLRERADEL----ELRIRNALFDQSRVVACTLVGSANQLLQGIHFHTLFID 357
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q P L +FVL GDH QLPP ++S AR G++ +L L+E HP+A+
Sbjct: 358 EAAQALEPACWIALRKCDRFVLAGDHCQLPPTIKSNAARYGGLDKTLMETLAETHPEAVR 417
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L QYRM + +M S+ Y +L + E+++ I ++D+ W+ A
Sbjct: 418 LLTVQYRMNEALMRFSSEWFYEGKLQ-AAPEVSHRGI-MADMDEPLVWVDTAGEDSEGQE 475
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEI--EGKDIGIITPYNSQANLIR 1255
+ + A + ++ A LI T+ + + + E DIGII+PY +Q +R
Sbjct: 476 DFHEQFIGASYGRINKAEARLTLATLI-DYTERIGRQRLLEERIDIGIISPYKAQVQYLR 534
Query: 1256 HSLSVS--------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
L + S+ I+T+D +QG+++D ILVS VR++E L D R+NVA
Sbjct: 535 ALLKKNAYLRPLRKSITINTVDAFQGQERDVILVSLVRANETGE---IGFLNDLRRMNVA 591
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+TRA+ KLI++G+ TL + K L +
Sbjct: 592 ITRARMKLIILGASTTLCRHKFYKKLYD 619
>gi|156061925|ref|XP_001596885.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980]
gi|154700509|gb|EDO00248.1| hypothetical protein SS1G_03108 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 702
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 215/465 (46%), Gaps = 87/465 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W + SLND Q+ AI L +K+ ALI G PGTGKT T++ + +L +G +L+ +N
Sbjct: 219 WVDLSLNDSQKHAIRFALASKEIALIHGPPGTGKTHTLIELILQMLKQGLRVLVCGPSNI 278
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L + +R+G + + H L + S V++++K +D
Sbjct: 279 SVDNIVERLAPHKVPILRLGHPARLLPSVVNHSLDVLTQTSEAAAIVQDVRKEMDTKQAS 338
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L D+ FD
Sbjct: 339 IKKTKSGRERKAIYGDLKELRKEFRERERKCVNTLVKGSKVVLATLHGAGGYQLRDENFD 398
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS-------------TEARENG 1119
V I+DEA Q PL+ A K VL GDH QLPP ++S TE+ G
Sbjct: 399 VVIIDEASQALEAQCWVPLLSAGKVVLAGDHLQLPPTIKSLNSKTKTNPQSTETESIIKG 458
Query: 1120 M--EISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
M E +LF RL + H I L +QYRM IM + +Y +L +A +K
Sbjct: 459 MTLETTLFDRLLKLHGIRIKVMLTTQYRMHDKIMRFPSDELYESKL------VAAEAVKA 512
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN-------------NPVEACL 1223
L+ ++E + P+IF +T E + + ++ N +EA L
Sbjct: 513 RLLTELPYDVEETEDTIEPLIFFDTQGGDFPEKSEEEGVDKKAGKGMLGESKSNEMEAAL 572
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILV 1281
+ + Q LV ++ +DI ++TPYN+Q L+ S+ +E+ ++D +QGR+K+ I+V
Sbjct: 573 VRRHVQNLVDAGLKPEDIAVVTPYNAQLALMARSMKQVFPGIELGSVDGFQGREKEAIIV 632
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
S VRS+ LG+ R+NVA+TR ++ L ++G T+S+
Sbjct: 633 SLVRSNS---EYEVGFLGEKRRLNVAMTRPRRSLTVIGDSETVSR 674
>gi|169777529|ref|XP_001823230.1| DNA polymerase alpha-associated DNA helicase A [Aspergillus oryzae
RIB40]
gi|83771967|dbj|BAE62097.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 720
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 157/575 (27%), Positives = 261/575 (45%), Gaps = 114/575 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T + V V+F + G S + D + E+W ++ D ++ MR
Sbjct: 141 GVVTRVGERSVWVAFGQQ---GGGGRSKEDDEAIEELWGKKLWLIKLAND---VTYRRMR 194
Query: 897 YNLVQL--FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
+ ++ ++S + +R D G+V + +++ SLND Q+ AI
Sbjct: 195 QTMEKMGKIIESDYTHFMRVAFGHTTPLPPDYGAVGDVE------FNDPSLNDSQKEAIR 248
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
L ++D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L + +
Sbjct: 249 FALASRDIALIHGPPGTGKTHTLIELILQMVQRKLRVLVCGPSNISVDNIVERLAPKKVP 308
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ------------------- 1050
VRIG + + +H L + S V +++K +DQ
Sbjct: 309 VVRIGHPARLLPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVASIRKTRFGREKRAIYQ 368
Query: 1051 -----------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
VV T G L ++KFDV I+DEA Q
Sbjct: 369 DLKELRREFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQC 428
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEAR---------------ENG------MEISLFR 1126
L+ ASK VL GDH QLPP V+ST+ + +NG +E ++F
Sbjct: 429 WISLLSASKVVLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFD 488
Query: 1127 RLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H ++I L +QYRM + IM + +Y +L G +K L
Sbjct: 489 RLLSLHGESIKRMLTTQYRMHETIMRFPSDELYESKLMAGD------AVKARLLKDLPYD 542
Query: 1186 LKEALNPCRPVIFVNT---DMLPAYEAKD--------HQTLNNPVEACLIAKITQELVKN 1234
++E + P++F +T D E K+ ++ +N +EA ++AK LV++
Sbjct: 543 VEETDDTKEPLVFWDTQGGDFPEKTEDKEVGQKEALLGESKSNEMEAMVVAKHVDNLVQS 602
Query: 1235 EIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRS-SENPR 1291
++ +DI +ITPYN Q ++ L +E+ ++D +QGR+K+ ++VS VRS SEN
Sbjct: 603 GLKPEDIAVITPYNGQLAILSQMLREKYPGIELGSVDGFQGREKEAVVVSLVRSNSEN-- 660
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 661 --EVGFLGEKRRLNVAMTRPKRHLCVCGDSETISK 693
>gi|391871546|gb|EIT80706.1| DNA helicase [Aspergillus oryzae 3.042]
Length = 728
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 157/575 (27%), Positives = 261/575 (45%), Gaps = 114/575 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T + V V+F + G S + D + E+W ++ D ++ MR
Sbjct: 149 GVVTRVGERSVWVAFGQQ---GGGGRSKEDDEAIEELWGKKLWLIKLAND---VTYRRMR 202
Query: 897 YNLVQL--FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
+ ++ ++S + +R D G+V + +++ SLND Q+ AI
Sbjct: 203 QTMEKMGKIIESDYTHFMRVAFGHTTPLPPDYGAVGDVE------FNDPSLNDSQKEAIR 256
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
L ++D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L + +
Sbjct: 257 FALASRDIALIHGPPGTGKTHTLIELILQMVQRKLRVLVCGPSNISVDNIVERLAPKKVP 316
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ------------------- 1050
VRIG + + +H L + S V +++K +DQ
Sbjct: 317 VVRIGHPARLLPSVLEHSLEVLTHTSDAASIVRDVRKEIDQKVASIRKTRFGREKRAIYQ 376
Query: 1051 -----------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
VV T G L ++KFDV I+DEA Q
Sbjct: 377 DLKELRREFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQC 436
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEAR---------------ENG------MEISLFR 1126
L+ ASK VL GDH QLPP V+ST+ + +NG +E ++F
Sbjct: 437 WISLLSASKVVLAGDHLQLPPTVKSTDQKSKDVKAGKVDTVNDGDNGVLGKMSLETTMFD 496
Query: 1127 RLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL H ++I L +QYRM + IM + +Y +L G +K L
Sbjct: 497 RLLSLHGESIKRMLTTQYRMHETIMRFPSDELYESKLMAGD------AVKARLLKDLPYD 550
Query: 1186 LKEALNPCRPVIFVNT---DMLPAYEAKD--------HQTLNNPVEACLIAKITQELVKN 1234
++E + P++F +T D E K+ ++ +N +EA ++AK LV++
Sbjct: 551 VEETDDTKEPLVFWDTQGGDFPEKTEDKEVGQKEALLGESKSNEMEAMVVAKHVDNLVQS 610
Query: 1235 EIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRS-SENPR 1291
++ +DI +ITPYN Q ++ L +E+ ++D +QGR+K+ ++VS VRS SEN
Sbjct: 611 GLKPEDIAVITPYNGQLAILSQMLREKYPGIELGSVDGFQGREKEAVVVSLVRSNSEN-- 668
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 669 --EVGFLGEKRRLNVAMTRPKRHLCVCGDSETISK 701
>gi|262381717|ref|ZP_06074855.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|423336431|ref|ZP_17314178.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
gi|262296894|gb|EEY84824.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|409240906|gb|EKN33680.1| hypothetical protein HMPREF1059_00130 [Parabacteroides distasonis
CL09T03C24]
Length = 640
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 219/465 (47%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH---------------CLSAMNINS 1040
KL + I+ +RIG ++ + + H S M S
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSNMRKKS 307
Query: 1041 VEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
EE I+ RL D+ +VVA T +G N ++ ++ F +DE
Sbjct: 308 REERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNRHFTTLFIDE 367
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 368 AAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHAKPETVSL 427
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y + L + +++ P+++
Sbjct: 428 LKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIVW 471
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
+T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 472 FDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--ENIDFGLISPYK 529
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+Q IR + + + +HT+D +QG+++D IL+S VR++E+ + L D
Sbjct: 530 AQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGK---IGFLND 586
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ K L N + ++ I+
Sbjct: 587 LRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|281203712|gb|EFA77908.1| AN1-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 988
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 224/455 (49%), Gaps = 78/455 (17%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K LN Q AI L++ + ALI G PGTGKT+T+V + + G +L +N +VD
Sbjct: 204 KKLNQPQIEAIEFALSSNEIALIHGPPGTGKTTTVVEFIVQVCKGGGRVLACGPSNLSVD 263
Query: 1003 NLLIKLKS--QSIDFVRIG----------RHEVVHK-----------EIQKHCLSAMN-- 1037
N+L +L ++ RIG +H + HK EI+ + M
Sbjct: 264 NILERLLEFKDIVNPTRIGHPARILSGLTKHTLDHKTKNGQDAQILKEIKIEIATLMKQL 323
Query: 1038 -------------INSVEEIKKRL--------DQV----KVVAVTCLGITNPLLTD-KKF 1071
N++ +++K L DQV V+ T G + +L+ + F
Sbjct: 324 KDGQVEKGARRSVYNTIRDLRKDLKNREFSLVDQVIRNSNVILSTNTGAADYVLSRCEPF 383
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
D I+DEA Q P+ K +L GDH QLPP + S +A+ +G+E ++F RL +
Sbjct: 384 DWVIIDEAAQALEASCWIPISRGKKLLLAGDHQQLPPTIHSEQAKSDGLETTMFERLIQL 443
Query: 1132 HPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIAN-------AKIKVSDLSSCS 1183
+ + IS L S QYRM Q IM S+ Y R+ + +AN K +V+ ++C
Sbjct: 444 YQENISRLLSVQYRMNQEIMRWSSDEFYHGRM-LADNSVANHLLLERSTKNRVATTTTC- 501
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKD--HQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
P++ ++T L E+ D Q+ N EA ++ K ++L++ +E I
Sbjct: 502 -----------PLMLIDTSGLDMEESADDESQSKFNVGEADIVVKYIEKLLRYGVEQSSI 550
Query: 1242 GIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
G+ITPYN Q ++ LS S +EI T+D +QGR+K+ +++S VRS+ P N L
Sbjct: 551 GVITPYNGQVKQLKMVLSNRFSDIEIGTVDGFQGREKEVVIISTVRSNAAPHNV--GFLA 608
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
+ R+NVA+TRAK+++ +V TLS P L ++
Sbjct: 609 EERRMNVAITRAKRQVTLVSDTDTLSSNPFLARMV 643
>gi|326426430|gb|EGD72000.1| hypothetical protein PTSG_00016 [Salpingoeca sp. ATCC 50818]
Length = 1132
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 222/455 (48%), Gaps = 72/455 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
KSLN Q A+ L D A+I G PGTGKT+T+V + L+ RG +L+ + +N AVD
Sbjct: 190 KSLNASQLGAVAFALQRPDIAVIHGPPGTGKTTTVVELILQLVKRGQKVLVAAASNMAVD 249
Query: 1003 NLLIKLKSQSIDFVRIGR-----HEV--------------------VHKEI--------- 1028
NL+ +L + + + VRIG H V +++EI
Sbjct: 250 NLVERLIAFNANVVRIGHPSRLLHSVKDHSLDSLLSSSEDMDIVRGIYEEIADIRNKRPS 309
Query: 1029 -QKHCLSAMNINSVEEIK-----------KRLDQVKVVAVTCLGITNPL--------LTD 1068
++ A + +IK + L Q+ A G T + +
Sbjct: 310 KRQPGARAAQFQAQRDIKDLRRDAQSRESRLLRQMLTSADVVCGTTTTVCPTGVLKNIPK 369
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FDV ++DEAGQ P + +M A + VL GDH+QLPP V S A +G+ I+L R
Sbjct: 370 EHFDVAVVDEAGQALEPAAWAAVMQAPRCVLAGDHFQLPPTVMSAAAVASGLPITLLERA 429
Query: 1129 SEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+++ L +QYRM I S+A +Y +L +D++A + L + +
Sbjct: 430 VNMFGDSVTRMLDTQYRMHAAIQSWSSAHLYNSQLHP-ADQVA------AHLLTQLDGVT 482
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P+++V+T A+E+ ++ N EA ++ + L+ ++ KDIG+IT
Sbjct: 483 DTETTRVPLVYVDTAGSGAHESSGEDDISKCNEGEAMIVVEHVSSLLSAGVQPKDIGVIT 542
Query: 1246 PYNSQANLIR-----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
PYN Q +R HS S VE+ ++D +QGR+K+ I++S VRS++ L D
Sbjct: 543 PYNLQVEKVRGLLSAHSGDASGVEVSSVDGFQGREKEAIVISLVRSNDER---IVGFLRD 599
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ RINVA+TRA++ L +VG T++ + L+N
Sbjct: 600 FRRINVAVTRARRHLCIVGDSNTITADEHMDSLVN 634
>gi|301310190|ref|ZP_07216129.1| DNA helicase [Bacteroides sp. 20_3]
gi|300831764|gb|EFK62395.1| DNA helicase [Bacteroides sp. 20_3]
Length = 640
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 219/465 (47%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH---------------CLSAMNINS 1040
KL + I+ +RIG ++ + + H S M S
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSNMRKKS 307
Query: 1041 VEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
EE I+ RL D+ +VVA T +G N ++ ++ F +DE
Sbjct: 308 REERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRIMMNRHFTTLFIDE 367
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 368 AAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHAKPETVSL 427
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y + L + +++ P+++
Sbjct: 428 LKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIVW 471
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
+T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 472 FDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--ENIDFGLISPYK 529
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+Q IR + + + +HT+D +QG+++D IL+S VR++E+ + L D
Sbjct: 530 AQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGK---IGFLND 586
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ K L N + ++ I+
Sbjct: 587 LRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKIIT 631
>gi|298375719|ref|ZP_06985676.1| DNA helicase [Bacteroides sp. 3_1_19]
gi|298268219|gb|EFI09875.1| DNA helicase [Bacteroides sp. 3_1_19]
Length = 640
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 233/501 (46%), Gaps = 95/501 (18%)
Query: 908 QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILG 967
Q S LR +++ E PR +F + + W LN Q A+ KVL AK +++ G
Sbjct: 161 QLSHLRDVLLGQEKPR--QRELF----PIRFPW----LNRSQEEAVNKVLGAKQVSIVHG 210
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVH-- 1025
PGTGKT+T+V A+ L R +++ + +N+AVD + KL + I+ +RIG ++
Sbjct: 211 PPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCISEKLVDRGINVLRIGNPTRINDK 270
Query: 1026 -------KEIQKH---------------CLSAMNINSVEE---IKKRL------------ 1048
+ + H S M S EE I+ RL
Sbjct: 271 MLSFTYERRFESHPDYPELWSIRKAVRDIQSNMRKKSREERDTIRNRLSRLKFRATELEV 330
Query: 1049 -------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
D+ +VVA T +G N ++ ++ F +DEA Q + A + +L G
Sbjct: 331 KIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDEAAQALEAACWIAIGKADRVILAG 390
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDR 1161
DH+QLPP ++ EA G+ +L ++++ P+ +S L+ QYRM + IM S+ Y +
Sbjct: 391 DHHQLPPTIKCIEAEREGLGRTLMQKIAHTKPETVSLLKIQYRMHEDIMRFSSQWFYHNE 450
Query: 1162 LSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPV 1219
L + +++ P+++ +T E +T++ N
Sbjct: 451 LESAPEVSGRGILRLDT----------------PIVWFDTSECDFTENTREETMSRVNRQ 494
Query: 1220 EACL--------IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--------V 1263
EA L I KI++E V E D G+I+PY +Q IR + + +
Sbjct: 495 EAELLVEQSRSYIQKISKERVLE--ENIDFGLISPYKAQVQYIRKLIKQDAFFKPLRRLI 552
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
+HT+D +QG+++D IL+S VR++E+ + L D R+NVA+TRA+ KL+++G T
Sbjct: 553 TVHTVDGFQGQERDVILISLVRANEDGK---IGFLNDLRRMNVAITRARMKLMILGDAST 609
Query: 1324 LSKVPLLKLLINKVGEQSGIL 1344
L++ L N + ++ I+
Sbjct: 610 LTRHAFYNELYNYISQRGKII 630
>gi|150007774|ref|YP_001302517.1| helicase [Parabacteroides distasonis ATCC 8503]
gi|149936198|gb|ABR42895.1| putative helicase [Parabacteroides distasonis ATCC 8503]
Length = 640
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 220/465 (47%), Gaps = 87/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + I+ +RIG R E + K I + S M
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAI-RDIQSNMRKK 306
Query: 1040 SVEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
S EE I+ RL D+ +VVA T +G N ++ ++ F +D
Sbjct: 307 SREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFID 366
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 367 EAAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHTKPETVS 426
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM + IM S+ Y + L + +++ P++
Sbjct: 427 LLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIV 470
Query: 1198 FVNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPY 1247
+ +T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 471 WFDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--ENIDFGLISPY 528
Query: 1248 NSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+Q IR + + + +HT+D +QG+++D IL+S VR++E+ + L
Sbjct: 529 KAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGK---IGFLN 585
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVA+TRA+ KL+++G TL++ K L N + ++ I+
Sbjct: 586 DLRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|358375281|dbj|GAA91865.1| DNA helicase [Aspergillus kawachii IFO 4308]
Length = 733
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 217/466 (46%), Gaps = 88/466 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+++ +LND Q+ AI L A++ ALI G PGTGKT T++ + ++ R +L+ +N
Sbjct: 250 FTDPTLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIELIVQMVQRKQRVLVCGPSNI 309
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK-- 1052
+VDN++ +L + + VRIG + + H L + S V +++K +DQ +
Sbjct: 310 SVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTSEAAEIVRDVRKEIDQKQAS 369
Query: 1053 ----------------------------------------VVAVTCLGITNPLLTDKKFD 1072
VV T G L ++KFD
Sbjct: 370 IRKTRSARERRAIYDDLRELRREFRERENKCVENLVRESSVVLATLHGAGGHQLKNQKFD 429
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST------------EARENG- 1119
V I+DEA Q PL+ ASK VL GDH QLPP V+ST + +ENG
Sbjct: 430 VVIIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKSTKDDVRKMKAKEEDKKENGE 489
Query: 1120 ------MEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
+E +LF RL H I L +QYRM + IM+ + +Y +L +A
Sbjct: 490 LLDNVSLETTLFDRLLSMHGPGIKRMLTTQYRMHEKIMQFPSDELYDSKL------MAAD 543
Query: 1173 KIKVSDLSSCSPWLKEALNPCRPVIFVNT----------DMLPAYEAKDHQTLNNPVEAC 1222
+K L ++E + P++F +T D +A + +N +EA
Sbjct: 544 TVKARLLKDLPYEVEETDDTKEPLVFWDTQGGDFPEKTEDADLGKKAHLGDSKSNDMEAL 603
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCIL 1280
++++ LV I +DI +ITPYN Q ++ L S+E+ ++D +QGR+K+ ++
Sbjct: 604 VVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLREKYPSIELGSVDGFQGREKEAVV 663
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
VS VRS+ LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 664 VSLVRSNSEHE---VGFLGERRRLNVAMTRPKRHLCICGDSETISK 706
>gi|392396283|ref|YP_006432884.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
gi|390527361|gb|AFM03091.1| DNA/RNA helicase, superfamily I [Flexibacter litoralis DSM 6794]
Length = 661
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 217/465 (46%), Gaps = 97/465 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A+ +L A+D A+I G PGTGKT+T+V A+ L I++ + +N+AVD L
Sbjct: 196 LNESQKNAVQNILRAQDIAIIHGPPGTGKTTTLVAAIVETLKNERQIMVCAPSNTAVDWL 255
Query: 1005 LIKLKSQSIDFVRIG---------RHEVVHKEIQKH---CLSAMNINSVEEIKKR----- 1047
KL +Q++ R+G H + +I+KH + E+++++
Sbjct: 256 TEKLNAQNVKVTRLGHPARVSDTLEHLTLDGKIEKHPDYKYYKSLLKQSEQMRRKALKFK 315
Query: 1048 ------------------------------------LDQVKVVAVTCLGITNPLLTDKKF 1071
L+ +V+A T G N +L + F
Sbjct: 316 RNFGKQERSERQHMLRDAKRLKQDALKLEEYISKHVLEHSQVLACTLAGSANYMLNHRTF 375
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
+DEA Q + P++ A++ ++ GDH QLPP ++S EA ++G+E +LF ++ +
Sbjct: 376 STLFIDEAAQALEGATWIPILKANRVIMAGDHQQLPPTIKSFEAAKSGLENTLFEKIIKN 435
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
HPQ + L QYRM + IME SN Y L E + +L+
Sbjct: 436 HPQTANMLSVQYRMNEQIMEFSNQKFYNGNLKAF--ETNKNHVLYQNLA----------- 482
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIA------------KITQELVKNEIE 1237
PV FV+T E ++ +TL+ NP EA L+ KI + ++N E
Sbjct: 483 ---PVEFVDTAGCGFSEMQNEETLSRYNPEEAKLVVSHLQVLFEEILLKIDNKEIENSKE 539
Query: 1238 GKD---IGIITPYNSQANLIRHSLSVSSV--------EIHTIDKYQGRDKDCILVSFVRS 1286
D +G+++ Y +Q L+R + + V IHT+D +QG++++ + +S VRS
Sbjct: 540 FIDNFSVGVLSTYKAQVYLLRDLIRKNEVLSNYSNQITIHTVDGFQGQEREVMYISLVRS 599
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLK 1331
+E L D+ R NVA+TRAKK+L++ G TL K
Sbjct: 600 NEKGE---IGFLKDFRRFNVAITRAKKRLVVFGDSATLGSDEFYK 641
>gi|730752|sp|P40694.1|SMBP2_MOUSE RecName: Full=DNA-binding protein SMUBP-2; AltName:
Full=ATP-dependent helicase IGHMBP2; AltName:
Full=Cardiac transcription factor 1; Short=CATF1;
AltName: Full=Immunoglobulin mu-binding protein 2
gi|293806|gb|AAA40143.1| DNA-binding protein [Mus musculus]
Length = 993
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 162/582 (27%), Positives = 270/582 (46%), Gaps = 89/582 (15%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ SGD V L ++ +A+G++T I++ V+V+F + L L N+
Sbjct: 82 SFTSGDIVGLYDTNENSQLATGVLTRITQKSVTVAFDESHDLQLNLDRENT--------- 132
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+R+ K ++ ++ L+ L S +S L +++ P S + P LS
Sbjct: 133 --YRLLKLANDVTYKRLKKALMTLKKYHSGPASSLIDILLGSSTP-----SPAMEIPPLS 185
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + +L+ Q+ A+ L K+ A+I G PGTGKT+T+V + + +G +L + +
Sbjct: 186 FYNT--TLDLSQKEAVSFALAQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPS 243
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV- 1051
N AVDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQV
Sbjct: 244 NIAVDNLVERLALCKKRILRLGHPARLLESVQHHSLDAVLARSDNAQIVADIRRDIDQVF 303
Query: 1052 -----------------------------------------KVVAVTCLGITN----PLL 1066
VV T G ++ LL
Sbjct: 304 GKNKKTQDKREKGNFRSEIKLLRKELKEREEAAIVQSLTAADVVLATNTGASSDGPLKLL 363
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
+ FDV ++DE Q PL+ A K +L GDH QLPP S A G+ SL
Sbjct: 364 PEDYFDVVVVDECAQALEASCWIPLLKAPKCILAGDHRQLPPTTVSHRAALAGLSRSLME 423
Query: 1127 RLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL+E+H + L QYRM Q IM ++ +Y + + +A +K DL P
Sbjct: 424 RLAEKHGAGVVRMLTVQYRMHQAIMCWASEAMYHGQFT-SHPSVAGHLLK--DL----PG 476
Query: 1186 LKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ + P++ ++T L E +D Q+ NP E L+ Q LV ++ DI +
Sbjct: 477 VTDTEETRVPLLLIDTAGCGLLELEEEDSQSKGNPGEVRLVTLHIQALVDAGVQAGDIAV 536
Query: 1244 ITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
I PYN Q +L+R SLS +EI ++D +QGR+K+ +L++FVRS+ R L +
Sbjct: 537 IAPYNLQVDLLRQSLSNKHPELEIKSVDGFQGREKEAVLLTFVRSN---RKGEVGFLAED 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
RINVA+TRA++ + ++ T++ L+ L++ E +
Sbjct: 594 RRINVAVTRARRHVAVICDSHTVNNHAFLETLVDYFTEHGEV 635
>gi|423331731|ref|ZP_17309515.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
gi|409229572|gb|EKN22444.1| hypothetical protein HMPREF1075_01528 [Parabacteroides distasonis
CL03T12C09]
Length = 640
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/465 (28%), Positives = 220/465 (47%), Gaps = 87/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + I+ +RIG R E + K I + S M
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAI-RDIQSNMRKK 306
Query: 1040 SVEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
S EE I+ RL D+ +VVA T +G N ++ ++ F +D
Sbjct: 307 SREERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFID 366
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 367 EAAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHTKPETVS 426
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM + IM S+ Y + L + +++ P++
Sbjct: 427 LLKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIV 470
Query: 1198 FVNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPY 1247
+ +T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 471 WFDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--ENIDFGLISPY 528
Query: 1248 NSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+Q IR + + + +HT+D +QG+++D IL+S VR++E+ + L
Sbjct: 529 KAQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGK---IGFLN 585
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVA+TRA+ KL+++G TL++ K L N + ++ I+
Sbjct: 586 DLRRMNVAITRARMKLMILGDASTLTRHAFYKELYNYISQRGKII 630
>gi|120952590|ref|NP_001038365.1| DNA-binding protein SMUBP-2 [Danio rerio]
Length = 997
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 233/469 (49%), Gaps = 76/469 (16%)
Query: 930 FSQDPALSYIWS----EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+SQ LS++++ L+D Q+ A+ ++ KD A+I G PGTGKT+T+V + +
Sbjct: 171 YSQPGILSHLYALEFNNTKLDDSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQAV 230
Query: 986 MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINS 1040
+ +L + +N AVDNL+ +L + +R+G + + IQKH L A+ N N
Sbjct: 231 KQQQKVLCCAPSNVAVDNLVERLAKNKVKVLRLGHPARLLESIQKHSLDAVLAHSDNTNI 290
Query: 1041 VEEIKKRLDQV------------------------------------------KVVAVTC 1058
+ +I+K +D+ V+ T
Sbjct: 291 ISDIRKDMDKAFNEIKKARDKGQRSNLRREIGELRRELRTREETAISQILKRADVILATN 350
Query: 1059 LGITN--PL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE 1114
G ++ PL L + FD+ ++DE Q L+ A K +L GD+ QLPP ++S
Sbjct: 351 TGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQS 410
Query: 1115 ARENGMEISLFRRLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
A G+ +SL RL +++ + + L +QYRM IM+ ++ +Y +L IA+
Sbjct: 411 AASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKL------IAHPS 464
Query: 1174 IK---VSDLSSCSPWLKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKIT 1228
++ + DL+ + + + P++ V+T L E D Q+ N E ++A
Sbjct: 465 VEKHLLRDLAGVADVEETRI----PLLLVDTAGCGLNEMENTDEQSKGNQGEVDIVALHI 520
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRS 1286
+ L + ++ KDI II PYN Q +L+R LS + +EI ++D +QGR+K+ +++S VRS
Sbjct: 521 KALTEAGVQVKDIAIIAPYNLQVDLLRQKLSHKYAELEIKSVDGFQGREKEAVVLSLVRS 580
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ R L + RINVA+TRA+++L++V +T+ LK L++
Sbjct: 581 N---RKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVD 626
>gi|358338526|dbj|GAA56936.1| DNA replication ATP-dependent helicase Dna2, partial [Clonorchis
sinensis]
Length = 1630
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 214/436 (49%), Gaps = 58/436 (13%)
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+++R+D+ + + N+V L + + LR +I+D P F + S+
Sbjct: 948 DLFRLDRYVSSKAVQLNLSNMVGLMQRGSTGDYLRSLIIDGAKPSFTA--TLSKHVVTGI 1005
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ LN Q+ A+++VL A Y LI G PGTGKT T+ ++ L+ G +L+ ++T+
Sbjct: 1006 RGILRHLNTCQKTAVLRVLMANHYVLIKGYPGTGKTETLASLLRVLIRLGQKVLVVAHTH 1065
Query: 999 SAVDNLLIKL-KSQSIDFVRIGRHEVVHKEI----------QKHCLSAMNINSVEEIKKR 1047
SAVDNLL++L KS +R+G + V+ E+ Q+ S + + I++
Sbjct: 1066 SAVDNLLVRLFKSGEQKILRLGSTDRVNPELLACTFEHMLHQQTKSSGSTTDPIAFIRQC 1125
Query: 1048 LDQVKVVAVTCL------GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA------- 1094
L+ VV T L G +P L +FD+ ++DEA Q LP S+G L+
Sbjct: 1126 LEDSAVVGCTALAASGGSGAQHPALCRTRFDLILVDEASQLLLPTSIGALLCLRSMDEST 1185
Query: 1095 ---SKFVLVGDHYQLPPLVQSTEARENGMEISLFRR-LSEEHPQAIS----------ALQ 1140
S+FVLVGD +QLPPLVQS EAR+ G++ SLF L+ P+++S AL
Sbjct: 1186 DRRSRFVLVGDPHQLPPLVQSNEARKAGLDRSLFTHLLAMNEPESVSPVSTKSGCVVALN 1245
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAK------------IKVSDLSSCSPWLKE 1188
QYRM I+ L+N L Y + + IAN ++V D WL
Sbjct: 1246 LQYRMNSPILRLANELSYSNAMKAVDASIANGTLADRLTRSVEQLVRVPDTGKIPSWLTR 1305
Query: 1189 ALNPC--RPVIFVNTDMLPA---YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
A++ +F++T + Y D + +NP EA L+ + L+ + +D+G+
Sbjct: 1306 AVSAQLEDAALFLDTSQWHSPEEYRGMDLK-FSNPTEAKLVVFLLNLLIMRGLLPEDVGV 1364
Query: 1244 ITPYNSQANLIRHSLS 1259
I P+ SQ L+R L+
Sbjct: 1365 IAPHRSQVGLLRRLLT 1380
Score = 101 bits (251), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 166/376 (44%), Gaps = 84/376 (22%)
Query: 406 AVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGR------ENN-------------FLI 446
+V L W T + GDT++++ G C R +NN LI
Sbjct: 389 SVDLLGSWCDTQLRTGDTIHIV---PSSGSCSGQRTHLSIGDNNPASVISSSDHIPTVLI 445
Query: 447 VHPDVLVSGTRVAASFSCPRRSVLDE----------RLKCSERSISA----LLGTLLHQI 492
HPD L+SGT++ +SF C RR+V++E + C++ S L+G+ +H++
Sbjct: 446 QHPDFLLSGTKLVSSFFCERRTVIEEFWSSFEDAAVEINCTDDRASPGRVMLIGSFVHEL 505
Query: 493 FQAGLMKEIPTMKFLEEYARLVLQK--NIESLYACGVNENDIHKTLVEAIPKMLNWIILF 550
Q ++ PT + +L + +I +Y CGV +++ +L + K+L+WI
Sbjct: 506 LQKLVVTPKPTKNPASQLISSILYRPDSILQMYGCGVEIDEMRSSLDPYVTKVLHWI--- 562
Query: 551 KDSQDLNTPTVDFGSDGLKKLK--ISEVTDIEEMAWAPKYGLKGMIDASIRVKI---ESK 605
+LN G+ + +V ++EE W+ K+G+KG ID S+ + E+
Sbjct: 563 ----ELNCCNFSTGTCSCTSTYPILHKVVNVEENFWSTKFGIKGRIDLSVLGHLPHPETP 618
Query: 606 RNEINGM-ILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGL--------- 655
+ ++P+E KTG+ S+EH+ QV+LY L++ +RY SGL
Sbjct: 619 HTRDKRLSLIPIELKTGR---PSYSIEHKGQVLLYLLMLLDRYGPTYTSGLPELISTANA 675
Query: 656 --LYYLQSDQTQ--------GVMVQRSD-LVGLIMRRNEFANDIIK----------ASTT 694
L YLQ D G+++ ++D GL+ RN + + A
Sbjct: 676 GWLVYLQDDNITPDNRKPHPGLVLPQADSFRGLLQTRNRLVTHLWRLICSLLNGNIADPA 735
Query: 695 QQLPPMLRAYGGNKEC 710
+PPM R + C
Sbjct: 736 SWMPPMPRPTKQLRSC 751
>gi|159464225|ref|XP_001690342.1| hypothetical protein CHLREDRAFT_127992 [Chlamydomonas reinhardtii]
gi|158279842|gb|EDP05601.1| predicted protein [Chlamydomonas reinhardtii]
Length = 640
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 215/446 (48%), Gaps = 62/446 (13%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
L+D QR+A+ L+AKD AL+ G PGTGKT+ +V + + RG+ +L S +N AVDN
Sbjct: 185 GLDDSQRQAVTLALSAKDLALVHGPPGTGKTTAVVEIILQEVARGSRVLAASASNIAVDN 244
Query: 1004 LLIKL--KSQSIDFVRIGRHE-----VVHKEIQKHCL----SAMNINSVEEIK------- 1045
L+ +L + + VR+G V+ ++ H L SA+ + EIK
Sbjct: 245 LVERLVRANPKLKLVRMGHPARLLPAVLDSSLEAHVLRSDNSALARDCRAEIKSINARLL 304
Query: 1046 -----------------KRLDQ----------------VKVVAVTCLGITNPLLTDKKFD 1072
+RL + +VV T G+++ L + FD
Sbjct: 305 KLGPRDRAERRELRGDLRRLGKEERQRQEAAVAEVIKGAQVVCCTLTGVSHRQLDKELFD 364
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
V ++DEA Q + G L+ A + VL GDH QLPP V S EA G+ +LF RL
Sbjct: 365 VAVVDEAAQALEAATWGALLRARRAVLAGDHLQLPPTVVSDEAARLGLARTLFERLQTSV 424
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
P A + L QYRM + IM+ S+ +Y +L+ + A+ + D+ +
Sbjct: 425 PTASAMLTVQYRMNKAIMQWSSDELYHGKLTA---HPSVAEHTLRDMPPDA-AAGAPGAG 480
Query: 1193 CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
C+ + EA + + NP EA + LV+ I + IGIITPYN+Q
Sbjct: 481 CKGMDTAGCGFEEQQEA-EGSSYANPGEAKAVMAHVARLVRIGIPPQHIGIITPYNAQVA 539
Query: 1253 LIRHSLSVS---SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
L++ + S ++EI ++D +QGR+K+ ILVS VRS++ L D R+NVA+T
Sbjct: 540 LLKELRAQSVGGALEISSVDGFQGREKEAILVSMVRSND---GGGVGFLSDRRRMNVAVT 596
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RA++ + T+S+ LK L+
Sbjct: 597 RARRHCAVFCDSETVSQDGFLKRLVE 622
>gi|70988781|ref|XP_749245.1| DNA helicase [Aspergillus fumigatus Af293]
gi|66846876|gb|EAL87207.1| DNA helicase, putative [Aspergillus fumigatus Af293]
Length = 730
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 154/577 (26%), Positives = 261/577 (45%), Gaps = 115/577 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T + + ++F + G S + D + E+W ++ D +F M
Sbjct: 148 GVVTRVGERSIWIAFGQ---RGGSGRSKEDDEAIEELWGKKLWLIKLAND---VTFRRMN 201
Query: 897 YNLVQLF-LQSAQSSQLRRMIVDLEAP-RFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
+ ++ + ++ S R+ AP + D G++ L ++ + +LND Q+ AI
Sbjct: 202 QTMEKMAKMTDSEYSHFMRVAFGHTAPMQPDYGAI----GPLEFV--DPTLNDSQKEAIR 255
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
L A+D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L +
Sbjct: 256 FALAARDVALIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNISVDNIVERLAPNGVP 315
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK----------------- 1052
VRIG + + +H L + S +++++K +D+ +
Sbjct: 316 VVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASIRKTRTGRERRAIYD 375
Query: 1053 -------------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
VV T G L ++KFDV ++DEA Q
Sbjct: 376 DLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQALEAQC 435
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQST----------------EARENGMEI--------S 1123
PL+ ASK VL GDH QLPP V+S+ +A N EI +
Sbjct: 436 WIPLLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASANSAEIIGDFSLETT 495
Query: 1124 LFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
LF RL H I L +QYRM + IM+ + +Y +L +A +K L
Sbjct: 496 LFDRLLSLHGPGIKRMLTTQYRMHEKIMQFPSDELYESKL------VAAETVKSRLLKDL 549
Query: 1183 SPWLKEALNPCRPVIFVNT-----------DMLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
++E + P++F +T D + EA ++ +N +EA ++AK Q L
Sbjct: 550 PYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQNL 609
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
++ ++ +DI ITPYN Q +L+ L +E+ ++D +QGR+K+ ++VS VRS+
Sbjct: 610 IQAGVKPEDIACITPYNGQLSLLSSMLREKYPGLELGSVDGFQGREKEAVVVSLVRSNSE 669
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 670 HE---VGFLGEKRRLNVAMTRPKRHLCICGDSETISK 703
>gi|159128659|gb|EDP53773.1| DNA helicase, putative [Aspergillus fumigatus A1163]
Length = 730
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 154/577 (26%), Positives = 261/577 (45%), Gaps = 115/577 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T + + ++F + G S + D + E+W ++ D +F M
Sbjct: 148 GVVTRVGERSIWIAFGQ---RGGSGRSKEDDEAIEELWGKKLWLIKLAND---VTFRRMN 201
Query: 897 YNLVQLF-LQSAQSSQLRRMIVDLEAP-RFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
+ ++ + ++ S R+ AP + D G++ L ++ + +LND Q+ AI
Sbjct: 202 QTMEKMAKMTDSEYSHFMRVAFGHTAPMQPDYGAI----GPLEFV--DPTLNDSQKEAIR 255
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
L A+D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L +
Sbjct: 256 FALAARDVALIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNISVDNIVERLAPNGVP 315
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK----------------- 1052
VRIG + + +H L + S +++++K +D+ +
Sbjct: 316 VVRIGHPARLLPSVLEHSLEVLTHTSEAAAIIKDVRKEIDEKQASIRKTRTGRERRAIYD 375
Query: 1053 -------------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
VV T G L ++KFDV ++DEA Q
Sbjct: 376 DLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQALEAQC 435
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQST----------------EARENGMEI--------S 1123
PL+ ASK VL GDH QLPP V+S+ +A N EI +
Sbjct: 436 WIPLLSASKVVLAGDHLQLPPTVKSSVDKLKNTKKKEKSDTKDASANSAEIIGDFSLETT 495
Query: 1124 LFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
LF RL H I L +QYRM + IM+ + +Y +L +A +K L
Sbjct: 496 LFDRLLSLHGPGIKRMLTTQYRMHEKIMQFPSDELYESKL------VAAEAVKSRLLKDL 549
Query: 1183 SPWLKEALNPCRPVIFVNT-----------DMLPAYEAKDHQTLNNPVEACLIAKITQEL 1231
++E + P++F +T D + EA ++ +N +EA ++AK Q L
Sbjct: 550 PYEVEETDDTREPIVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHVQNL 609
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
++ ++ +DI ITPYN Q +L+ L +E+ ++D +QGR+K+ ++VS VRS+
Sbjct: 610 IQAGVKPEDIACITPYNGQLSLLSSMLREKYPGLELGSVDGFQGREKEAVVVSLVRSNSE 669
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 670 HE---VGFLGEKRRLNVAMTRPKRHLCICGDSETISK 703
>gi|150020793|ref|YP_001306147.1| putative DNA helicase [Thermosipho melanesiensis BI429]
gi|149793314|gb|ABR30762.1| putative DNA helicase [Thermosipho melanesiensis BI429]
Length = 643
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 162/280 (57%), Gaps = 16/280 (5%)
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+L D +FDV ++DEA Q+T+P L PL KFVL GDH QLPP + S +A+E + +L
Sbjct: 367 ILKDYEFDVVVVDEATQSTIPSVLIPLSKGKKFVLAGDHKQLPPTILSEKAKE--LSTTL 424
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L +++PQ L+ QYRM + +ME N Y + L G + N +K + +P
Sbjct: 425 FEMLIKKYPQKSEILKIQYRMNERLMEFPNKEFYNNLLISG---VKNITLKDLNFKGKTP 481
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEA--KDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
N +IF++T L YE KD + N +EA +I I + + + + IG
Sbjct: 482 ----LTNYENVLIFIDTSCLENYEEQRKDSTSYINKLEANVIKNIVESFINEGAKREWIG 537
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+I+PY+ Q LIR S + ++++T+D +QGR+K+ IL+SFVRS+ +N L D
Sbjct: 538 VISPYDDQVELIR-SFDL-KIDVNTVDGFQGREKEIILISFVRSN---KNGELGFLNDLR 592
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R+NV+LTRAK+KLI++G+ TL K K LIN + + G
Sbjct: 593 RLNVSLTRAKRKLILIGNSNTLIKNQTYKRLINFIKKGYG 632
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+ Q+ AI K L ++D++LI G GTGKT T+ + +G IL+T+ +N AVDN
Sbjct: 166 NLNEYQKLAISKALKSEDFSLIHGPFGTGKTRTLAEYILQEAKKGKKILVTADSNLAVDN 225
Query: 1004 LLIKLKSQSIDFVRIG 1019
L+ +L S+SI VRIG
Sbjct: 226 LVERL-SESISHVRIG 240
>gi|242038955|ref|XP_002466872.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
gi|241920726|gb|EER93870.1| hypothetical protein SORBIDRAFT_01g015520 [Sorghum bicolor]
Length = 650
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 217/448 (48%), Gaps = 69/448 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K+L+D Q+ AI K L ++D L+ G PGTGKT+T++ + + RG+ IL + +N AVD
Sbjct: 198 KNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIAVD 257
Query: 1003 NLLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHC 1032
N++ +L VR+G R E+ K +
Sbjct: 258 NIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEM--KVLNSKL 315
Query: 1033 LSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDV 1073
L A + N+ +I+K L D +K VV T G ++ L FD+
Sbjct: 316 LKAKDRNTKRDIRKELRALAKEERKRQQLAVTDVLKNADVVLTTLTGASSKKLNGITFDL 375
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
++DEA Q L+ + +L GDH QLPP +QS EA + GM +LF RL+E +
Sbjct: 376 VVIDEAAQALEVACWIALLKGPRCILAGDHLQLPPTIQSVEAEKKGMGKTLFERLTEAYG 435
Query: 1134 QAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
+ I S L QYRM + IM S+ +Y +++ S + + +++ S + P
Sbjct: 436 EEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSS-----STEP 490
Query: 1193 CRPVIFVNTDMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
+I ++T E KD + T+N A IA + LV++ + DIGIITPY++Q
Sbjct: 491 T--IILIDTTGCDMEEVKDEEESTMNEGEAAVSIAH-AKLLVESGVNASDIGIITPYSAQ 547
Query: 1251 ANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
++ + +EI T+D +QGR+K+ I++S VRS+ L D R+NV
Sbjct: 548 VTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDHRRMNV 604
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
A+TRA+++ +V T+S LK L+
Sbjct: 605 AVTRARRQCCLVCDVETVSNDRFLKRLV 632
>gi|357509763|ref|XP_003625170.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
gi|355500185|gb|AES81388.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
Length = 645
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 141/449 (31%), Positives = 218/449 (48%), Gaps = 71/449 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K+L+ Q+ AI K L++K+ L+ G PGTGKT+T+V + + RG+ IL + +N AVD
Sbjct: 193 KNLDYSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 252
Query: 1003 NLLIKLKSQSIDFVRIGRH-----EVVHKEIQKHCLSAMNI------------------- 1038
N++ +L + VRIG +VV + L N
Sbjct: 253 NIVERLVPHRVKLVRIGHPARLLPQVVDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLK 312
Query: 1039 ----NSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVCI 1075
N+ EI+K L D +K V+ T +G ++ L + FD+ I
Sbjct: 313 TKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTSDVILTTLIGASSKKLGNTSFDLVI 372
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q PL+ ++ +L GDH QLPP +QS EA + G+ +LF RL+E +
Sbjct: 373 IDEAAQALEVACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAELYGDE 432
Query: 1136 I-SALQSQYRMCQGIMELSNALIYGDRL---SCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ S L QYRM Q IM+ S+ +Y ++ +C + + V SS P L
Sbjct: 433 VTSMLTVQYRMHQLIMDWSSKELYNSKVKAHACVASHMLYDLEGVKKTSSTEPTL----- 487
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+ ++T E KD + TLN +A + LV++ + DIGIITPY +
Sbjct: 488 -----LLIDTAGCDMEEKKDEEDSTLNEGESEVAMAH-AKRLVQSGVLPSDIGIITPYAA 541
Query: 1250 QANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
Q L++ S+ +EI T+D +QGR+K+ I++S VRS+ L D R+N
Sbjct: 542 QVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDRRRMN 598
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
VA+TRA+++ +V T+S LK LI
Sbjct: 599 VAVTRARRQCCIVCDTETVSSDGFLKRLI 627
>gi|212526278|ref|XP_002143296.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210072694|gb|EEA26781.1| DNA helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 713
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 226/490 (46%), Gaps = 103/490 (21%)
Query: 921 APRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
+P +D+ G+V DP +LND Q+ AI L +K+ ALI G PGTGKT T++
Sbjct: 216 SPDYDAIGTVDFIDP---------TLNDSQKEAIRFALASKEIALIHGPPGTGKTHTLIE 266
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN 1039
+ + R IL+ +N +VDN++ +L + VR+G + + H L +
Sbjct: 267 LILQMTRRDMRILVCGPSNVSVDNIVERLTPHKVPIVRVGHPARLLPSVLDHSLEVLTQT 326
Query: 1040 S-----VEEIKKRLDQ------------------------------------------VK 1052
S V +++K +D+ K
Sbjct: 327 SEAAEIVRDVRKEIDEKQASIRKTRNGRERREIYGDLKELRKEFRERESKCVENLVTGSK 386
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T G L ++KFDV I+DEA Q PL+ AS+ VL GDH QLPP ++S
Sbjct: 387 VVLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLTASRAVLAGDHLQLPPTIKS 446
Query: 1113 T-------------EAREN--------GMEISLFRRLSEEH-PQAISALQSQYRMCQGIM 1150
T EA ++ +E ++F RL H P L +QYRM + IM
Sbjct: 447 TNIDAKKISKSKAKEAEKDSSESLKGVSLEKTMFDRLLALHGPSIKRMLTTQYRMHEKIM 506
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT--DMLPAYE 1208
+ + +Y +L IA +K L ++E + P++F++T D P +
Sbjct: 507 QFPSNELYEGKL------IAADSVKGRLLKDLPYGVEETDDTKEPLVFIDTQGDDFPE-K 559
Query: 1209 AKDHQTL----------NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
A+D T +N +EA + + + L+ + +DI ++TPYN+Q LI SL
Sbjct: 560 AEDEDTAVKGGPISESKSNEMEARIAIRHVEGLIDAGVRPEDIAVVTPYNAQVALIAQSL 619
Query: 1259 --SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+EI ++D +QGR+K+ I+VS VRS+E LG+ R+NVA+TR K+ L
Sbjct: 620 KEKYPGIEIGSVDGFQGREKEAIVVSLVRSNEKHE---VGFLGEKRRLNVAMTRPKRHLC 676
Query: 1317 MVGSCRTLSK 1326
+ G T+SK
Sbjct: 677 VCGDSETISK 686
>gi|332249730|ref|XP_003274011.1| PREDICTED: DNA-binding protein SMUBP-2 [Nomascus leucogenys]
Length = 1002
Score = 177 bits (449), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 167/588 (28%), Positives = 276/588 (46%), Gaps = 98/588 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVIL---STESDRLAVASGLITEISRFHVSVSFSKP----LRL 864
AA+P+ + SGD V L ++ES +LA +G++T +++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAASESSQLA--TGILTRVTQKSVTVAFDESHDFQLSL 128
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPR 923
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 129 DRENS-----------YRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAP- 176
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGK
Sbjct: 177 ----SPASEIHPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKPWFDYEVNDQ 230
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS--- 1040
+L G+ +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 231 ILTCGSQVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSA 290
Query: 1041 --VEEIKKRLDQV------------------------------------------KVVAV 1056
V +I+K +DQV VV
Sbjct: 291 QIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLA 350
Query: 1057 TCLGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
T G ++ LL + FDV ++DE Q PL+ A K +L GDH QLPP S
Sbjct: 351 TNTGASDDGPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVS 410
Query: 1113 TEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
+A G+ +SL RL+EE+ + + L QYRM Q IM ++ +Y +L+ +A
Sbjct: 411 HKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLT-AHPSVAG 469
Query: 1172 AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQ 1229
++ DL P + P++ V+T + E +D Q+ NP E L++ Q
Sbjct: 470 HLLR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQ 523
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
LV + +DI +++PYN Q +L+R SL +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 524 ALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSN 583
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ RT++ LK L+
Sbjct: 584 ---RKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVE 628
>gi|357121239|ref|XP_003562328.1| PREDICTED: DNA-binding protein SMUBP-2-like [Brachypodium distachyon]
Length = 652
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 149/515 (28%), Positives = 242/515 (46%), Gaps = 76/515 (14%)
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQL--FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDP 934
L+ R++K ++ M+ L+QL +Q+ S+ L ++ F S
Sbjct: 139 LNSPLRLEKLANEVTYRRMKDALIQLSKAIQTGPSANLVPVL-------FGENSPLCSKD 191
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
A+ + K+L+D Q+ AI K L ++D L+ G PGTGKT+T++ + + RG+ IL
Sbjct: 192 AVKFSPFNKNLDDSQKDAISKALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILAC 251
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIG------------------------------RHEVV 1024
+ +N AVDN++ +L VR+G R E+
Sbjct: 252 AASNIAVDNIVERLSQYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEM- 310
Query: 1025 HKEIQKHCLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPL 1065
K + L A + N+ +I+K L D +K VV T G ++
Sbjct: 311 -KVLNSKLLKAKDRNTKRDIRKELKTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKK 369
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
L FD+ I+DEA Q L+ + VL GDH QLPP +QS EA + GM +LF
Sbjct: 370 LDGITFDLVIIDEAAQALEVACWIALLKGPRCVLAGDHLQLPPTIQSVEAEKKGMGKTLF 429
Query: 1126 RRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL+E + I S L QYRM + IM S+ +Y +++ S + + +++ S
Sbjct: 430 ERLTEGYGDKITSMLTIQYRMHELIMNWSSKELYNNKIKAHSSVAGHMLYDLENVNRSS- 488
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ P +I ++T E KD ++ N EA + + LV++ + DIGI
Sbjct: 489 ----STEPT--IILIDTTGCDMEEVKDEEESTMNEGEAAVSVAHAKLLVESGVLASDIGI 542
Query: 1244 ITPYNSQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
ITPY++Q ++ + +EI T+D +QGR+K+ I++S VRS+ L
Sbjct: 543 ITPYSAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLS 599
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+++ +V T+S LK L+
Sbjct: 600 DHRRMNVAVTRARRQCCIVCDAETVSNDKFLKRLV 634
>gi|441501354|ref|ZP_20983473.1| putative helicase [Fulvivirga imtechensis AK7]
gi|441434890|gb|ELR68315.1| putative helicase [Fulvivirga imtechensis AK7]
Length = 641
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 227/466 (48%), Gaps = 91/466 (19%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
LN+ Q +A+ VL+A D A+I G PGTGKT+T++ A+ L L+ + +N+AVD
Sbjct: 185 GLNESQNKALNLVLSATDVAIIHGPPGTGKTTTLIQAILETLKIEKQTLVCAPSNAAVDL 244
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKE---------IQKH----CLSAMNINSVE-------- 1042
L +L Q ++ +RIG V +E I KH L A+ + E
Sbjct: 245 LADRLGEQGVNVLRIGHPARVTEETLGKTLDVRITKHPDYKNLKALRKQAEEYRSMGKKY 304
Query: 1043 ---------EIKKRL-----------------------DQVKVVAVTCLGITNPLLTDKK 1070
E +KRL + +V+A T +G + +L
Sbjct: 305 KRHFGYAEREQRKRLLTEARALYDEADHLSFYITSDIIAKSQVIACTMVGANSAMLKGMH 364
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
F+ MDEA Q P S P++ A + + GDH QLPP ++S EA NG+EI+LF + +
Sbjct: 365 FNTVFMDEAAQALEPASWIPIIKADRVIFAGDHCQLPPTIKSFEAARNGLEITLFEKAIK 424
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
++ QA L+ QYRM IM S+ + Y +RL + +A+ KI D
Sbjct: 425 QN-QADVMLEEQYRMNMDIMNFSSRIFYKNRL-VANQTVAHWKIFEGD------------ 470
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEI-------EGKDI 1241
+ V F++T +E D +T++ N EA L+ + ++ ++ EI E + I
Sbjct: 471 ---QTVEFIDTAGCGFFEDVDPETMSSFNTEEAELLLRHFRQYIE-EIKALEKFEEVESI 526
Query: 1242 GIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
GII PY +Q +L++ + V+ + ++T+D +QG+++D I ++ VRS+E
Sbjct: 527 GIIAPYKAQVSLLQDLVQQSNFDEQLVNKLTVNTVDSFQGQERDIIYITLVRSNEKGE-- 584
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
L + R+NVA+TRA+KKL+++G T+ + ++ V E
Sbjct: 585 -IGFLANTRRMNVAITRARKKLVIIGDSATIGQNEFYSAFLDYVNE 629
>gi|255036839|ref|YP_003087460.1| type III restriction protein res subunit [Dyadobacter fermentans DSM
18053]
gi|254949595|gb|ACT94295.1| type III restriction protein res subunit [Dyadobacter fermentans DSM
18053]
Length = 636
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 237/515 (46%), Gaps = 106/515 (20%)
Query: 897 YNLVQLFLQSAQS-------SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQ 949
Y+ +Q L++A S L +++ +AP FD Y + LN Q
Sbjct: 133 YDEMQSALKTADSLGSSDKEGHLIKVLTGEKAPSFDKDI---------YPITLPKLNPSQ 183
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDNLLIKL 1008
+RA+ +L+A++ A++ G PGTGKT+T+V A+KAL+ + IL+ + +N+AVD L KL
Sbjct: 184 QRAVQNILSAQELAIVHGPPGTGKTTTLVQAIKALVKKDNRPILVVAPSNTAVDLLSEKL 243
Query: 1009 KSQSIDFVRIGRHEVVHKEIQKHCL-----SAMNINSVEEIKKR---------------- 1047
+ ++ +R+G V + + L S ++ ++ +KK+
Sbjct: 244 SEEGLNVLRVGNPVRVSERLTALTLDSKMSSHASVKDIKTLKKQANEYKNMAHKYKRHFG 303
Query: 1048 --------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVCI 1075
L + +VV T +G + + + K+ +
Sbjct: 304 KAERDQRKALFDEAHRIMKDVANMEQYIIDDLLTKTQVVTATLVGSNHFTVRNMKYRTVV 363
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEAGQ P P++ A K V GDH QLPP ++S EA + G+ +L + HP++
Sbjct: 364 IDEAGQALEPACWIPILKAEKVVFAGDHLQLPPTIKSEEAAKGGLSTTLLEKCVALHPES 423
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR- 1194
+ L+ QYRM + IM S+ + Y D+L + +A L P
Sbjct: 424 VVLLEEQYRMNEAIMGYSSKVFYHDKLKA-HESVAG----------------RVLFPGEA 466
Query: 1195 PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN--EIEGK-----DIGIITPY 1247
P+ FV+T + + + NP EA + K +L ++ K I II+PY
Sbjct: 467 PLAFVDTAGCGFDDKLEGTSSTNPEEAAFLFKHLTQLAAEFAKVNPKPESFPSIAIISPY 526
Query: 1248 NSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q N++++ L+ + + ++TID +QG+++D + +S R N L
Sbjct: 527 KEQINILKNLLAHAPHLQLYLDKIAVNTIDSFQGQERDVVYISMTR---NNIEGQIGFLA 583
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+KKL+++G TLS +P + I
Sbjct: 584 DIRRMNVAMTRARKKLVVIGDSATLSVLPFYENFI 618
>gi|436833526|ref|YP_007318742.1| AAA ATPase [Fibrella aestuarina BUZ 2]
gi|384064939|emb|CCG98149.1| AAA ATPase [Fibrella aestuarina BUZ 2]
Length = 632
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 214/453 (47%), Gaps = 87/453 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ K+L+A + A++ G PGTGKT+T++ A+KAL+ + +L+ + +N+AVD
Sbjct: 178 LNPSQVAAVHKILSANELAIVHGPPGTGKTTTLIQAIKALIKQDRQKLLVVAPSNTAVDL 237
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCL-----SAMNINSVEEIKKRLDQVK------ 1052
L KL + ++ +RIG V + + L + ++N+ +++KK+ ++ +
Sbjct: 238 LSEKLHDEGLNVLRIGNPARVSERLMALTLDHKVSTHPHMNAAKKLKKQANEFRTMAHKY 297
Query: 1053 ------------------------------------------VVAVTCLGITNPLLTDKK 1070
VV T +G N + D
Sbjct: 298 KRNFGKAEREQRKALFDEAHRLLKDVGQAEQYVIDDLIANAQVVTATLVGANNYTVRDLT 357
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+ ++DEAGQ P P++ A K VL GDH QLPP ++S EA NG+ +L +
Sbjct: 358 YHTVVIDEAGQALEPACWIPILKAQKVVLAGDHCQLPPTIKSAEAARNGLGTTLLEKCVA 417
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
HP+A++ L QYRM + IM S+ + Y +++ +A + D +
Sbjct: 418 LHPEAVTLLNEQYRMHEHIMGYSSQVFYDNQVKA-HPSVARHALFADDTA---------- 466
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG------II 1244
+ FV+T E D + NP EA L+ + +LV + + +G +I
Sbjct: 467 -----LAFVDTAGCGFDEKLDGTSSTNPDEAALLIRHLTQLVGDLSQRYSLGTFPTIAVI 521
Query: 1245 TPYNSQANLIRHSLSVS--------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
+PY Q N++ L S + ++TID +QG+++D + +S VRS+
Sbjct: 522 SPYKQQINVLTEQLKNSPELQPYSGHISVNTIDSFQGQERDIVYISLVRSNT---EGDIG 578
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
L D R+NVA+TRA+KKL++ G TL+ +P
Sbjct: 579 FLSDIRRMNVAMTRARKKLVIFGDSATLASLPF 611
>gi|66824331|ref|XP_645520.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60473615|gb|EAL71556.1| AN1-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 1024
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 153/563 (27%), Positives = 262/563 (46%), Gaps = 79/563 (14%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G++ ++ + ++F N+ D ++ IDK ++ +R +L +L
Sbjct: 127 GVVYKVDSRKIVIAFDDNYEDSDPNNRPMLDEYFQTLYSIDKLANDVTYKKIRESLDKLK 186
Query: 904 LQ------SAQSSQLRRMIVDLEAPRFDSGSVFSQ--DPALSYIWSEKSLNDDQRRAIIK 955
L ++++S + ++ D P ++ S F Q K LN Q+ AI+
Sbjct: 187 LNVNKRTGNSENSLINLLLNDGYQPS-NNNSYFQQINKEKFEQQLINKGLNQSQKEAILF 245
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS--- 1012
L++ D A I G PGTGKT+T+V + L+ G +L +N +VDN+L KL S
Sbjct: 246 SLSSNDVACIHGPPGTGKTTTVVEFIVQLIKSGKKVLACGPSNLSVDNMLEKLLEYSNSS 305
Query: 1013 ------IDFVRIGRHEVVHKEIQKHCLSAMNINS------------VEEIKKRLDQVK-- 1052
I+ RIG + ++ KH L NS ++ + K+L +VK
Sbjct: 306 SCNGFLINATRIGHPTRILPQLLKHTLDHKTKNSEGGQIIKGIKDEIKSLSKQLLKVKQH 365
Query: 1053 ---------------------------------VVAVTCLGITNPLLTD-KKFDVCIMDE 1078
V+ T G ++ L FD ++DE
Sbjct: 366 SERRVIQSSIKELRIDLKNREKSLIQQVINDSNVILSTNTGASDSSLKGIDNFDWVVIDE 425
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
Q P+ +K +L GDH QLPP + S EA + G+ I+LF R+ +++ +S
Sbjct: 426 CAQALEASCWIPIQKGNKLLLAGDHQQLPPTIHSMEAAKMGLSITLFERIIKQYGDQVSR 485
Query: 1139 LQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L + QYRM IM+ S+ Y ++ ++N + D SP ++ L P++
Sbjct: 486 LLNVQYRMNHKIMDWSSMEFYNSKM-IADKSVSNHLLVTGD----SPKIRNTLTTTCPLL 540
Query: 1198 FVNT---DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
++T DM + + + NN E ++ + ++L++ ++ DIG+ITPYN Q L+
Sbjct: 541 MIDTSGCDMEESQDDEGESKFNNG-EVIVVKRHIEKLIECGVKPNDIGVITPYNGQVKLL 599
Query: 1255 RHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+ LS SS+EI T+D +QGR+KD I++S VRS+ + + L D R NVA+TRA+
Sbjct: 600 KSYLSKKYSSMEIGTVDGFQGREKDVIIISMVRSNTDAPHKVGFLTED-RRTNVAITRAR 658
Query: 1313 KKLIMVGSCRTLSKVPLLKLLIN 1335
K +++V T+S LK +++
Sbjct: 659 KHVVVVCDTDTISSHEPLKRMVD 681
>gi|255013517|ref|ZP_05285643.1| putative helicase [Bacteroides sp. 2_1_7]
gi|410103629|ref|ZP_11298550.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
gi|409236358|gb|EKN29165.1| hypothetical protein HMPREF0999_02322 [Parabacteroides sp. D25]
Length = 640
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 218/464 (46%), Gaps = 85/464 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH---------------CLSAMNINS 1040
KL + I+ +RIG ++ + + H S M S
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSNMRKKS 307
Query: 1041 VEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
EE I+ RL D+ +VVA T +G N ++ ++ F +DE
Sbjct: 308 REERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDE 367
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 368 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHTKPETVSL 427
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y + L + +++ P+++
Sbjct: 428 LKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIVW 471
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
+T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 472 FDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--ENIDFGLISPYK 529
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+Q IR + + + IHT+D +QG+++D IL+S VR++E+ + L D
Sbjct: 530 AQVQYIRKLIKQDAFFKPLRRLITIHTVDGFQGQERDVILISLVRANEDGK---IGFLND 586
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
R+NVA+TRA+ KL+++G TL++ L N + ++ I+
Sbjct: 587 LRRMNVAITRARMKLMILGDASTLTRHAFYNELYNYISQRGKII 630
>gi|224029893|gb|ACN34022.1| unknown [Zea mays]
gi|414871609|tpg|DAA50166.1| TPA: hypothetical protein ZEAMMB73_963119 [Zea mays]
Length = 646
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 148/516 (28%), Positives = 247/516 (47%), Gaps = 78/516 (15%)
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQL--FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDP 934
L+ R++K ++ M+ L++L +Q+ + L ++ +AP + S+D
Sbjct: 133 LNSPLRLEKLANEVTYRRMKDALIELSKAVQTGPCANLVPVLFGEKAP------MRSKD- 185
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
A+ + K+L+D Q+ AI K L ++D L+ G PGTGKT+T++ + + RG+ IL
Sbjct: 186 AMKFSPFNKNLDDSQKEAISKALGSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILAC 245
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIG------------------------------RHEVV 1024
+ +N AVDN++ +L VR+G R E+
Sbjct: 246 AASNIAVDNIVERLARYRTKLVRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEM- 304
Query: 1025 HKEIQKHCLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPL 1065
K + L A + N+ +I+K L D +K VV T G ++
Sbjct: 305 -KVLNSKLLKAKDRNTKRDIRKELKTLAKEERKRQQLAVTDVLKNADVVLTTLTGASSKK 363
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
L FD+ ++DEA Q L+ + +L GDH QLPP +QS EA + GM +LF
Sbjct: 364 LNGITFDLVVIDEAAQALEVACWIALLKGPRCILAGDHLQLPPTIQSVEAEKKGMGKTLF 423
Query: 1126 RRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL+E + + I S L QYRM + IM S+ +Y +++ S + + +++ S
Sbjct: 424 ERLTEAYGEEITSMLTVQYRMHEHIMSWSSKELYNNKIKAHSSVAGHMLYDLEEVTRSS- 482
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ P ++ ++T E KD + T+N A IA + LV++ + DIG
Sbjct: 483 ----STEP--TIVLIDTTGCDMEEVKDEEESTMNEGEAAVSIAH-AKLLVESGVNASDIG 535
Query: 1243 IITPYNSQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
IITPY +Q ++ + +EI T+D +QGR+K+ I++S VRS+ L
Sbjct: 536 IITPYAAQVTCLKMMRNKDAKLKDLEISTVDGFQGREKEAIIISMVRSNSKKE---VGFL 592
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+++ +V T+S LK L+
Sbjct: 593 SDHRRMNVAVTRARRQCCLVCDVETVSSDRFLKRLV 628
>gi|256421450|ref|YP_003122103.1| ATPase AAA [Chitinophaga pinensis DSM 2588]
gi|256036358|gb|ACU59902.1| AAA ATPase [Chitinophaga pinensis DSM 2588]
Length = 635
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 222/466 (47%), Gaps = 87/466 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q+ A+ ++L A D A++ G PGTGKT+T+V A+KAL+ + IL+ + +N+AVD
Sbjct: 179 LNASQQHAVNRILAANDLAIVHGPPGTGKTTTLVQAIKALIKQDNKQILVVAPSNTAVDL 238
Query: 1004 LLIKLKSQSIDFVRIGR------------------------------------HEVVHK- 1026
L KL + ++ +R+G ++ HK
Sbjct: 239 LSEKLSEEGLNVLRVGNPARVSERLSSLTLDSRMTEHASMKEIKRLKKQANEFRDMAHKY 298
Query: 1027 --------EIQKHCL--SAMNI-NSVEEIKKR-----LDQVKVVAVTCLGITNPLLTDKK 1070
Q+ L A NI SVE ++ + + +++ T +G + + K
Sbjct: 299 KRNFGKAEREQRKALFDEARNIMKSVENTEQYIMDDLMAKAQIITATLVGANHYTVRKLK 358
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+ ++DEAGQ P P++ A K +L GDH QL P V+S EA G+ +L +
Sbjct: 359 YHTIVIDEAGQALEPACWIPILKAQKVILAGDHCQLSPTVKSDEAARKGLSTTLLEKCIA 418
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
HP+++ L+ QYRM + IM S+A+ Y D+L + +A + D+
Sbjct: 419 LHPESVVLLEEQYRMHEMIMGYSSAVFYADKLKAHAS-VAAHTLFPDDM----------- 466
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK------NEIEGKDIGII 1244
P+ FV+T E + + NP EA + K ++ V + I II
Sbjct: 467 ----PLSFVDTAGCGFDEKTEGTSTTNPEEAAFLFKHLRQFVTGLHTHYQPQQFPSIAII 522
Query: 1245 TPYNSQANLIRHS-LSVSSVE-------IHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
+PY Q ++++ LSV ++ ++TID +QG+++D + +S RS+ + +
Sbjct: 523 SPYKQQIHILKEQLLSVPELQAYGDRISVNTIDSFQGQERDIVYISMTRSNNDNK---IG 579
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
L D R+NVA+TRA+KKL+++G TLS++P I +Q+
Sbjct: 580 FLSDIRRMNVAMTRARKKLVIIGDSATLSQLPFYAGFIAYAEQQNA 625
>gi|115453945|ref|NP_001050573.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|50399951|gb|AAT76339.1| putative DNA helicase [Oryza sativa Japonica Group]
gi|108709563|gb|ABF97358.1| DNA helicase family protein, expressed [Oryza sativa Japonica Group]
gi|113549044|dbj|BAF12487.1| Os03g0586900 [Oryza sativa Japonica Group]
gi|215704640|dbj|BAG94268.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193224|gb|EEC75651.1| hypothetical protein OsI_12407 [Oryza sativa Indica Group]
gi|222625290|gb|EEE59422.1| hypothetical protein OsJ_11580 [Oryza sativa Japonica Group]
Length = 651
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 259/569 (45%), Gaps = 99/569 (17%)
Query: 840 AVASGLITEISRFHVSVSFSKPLRLP--GRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
A+ G++ + ++V+F +P G NS + L +EV ++ M+
Sbjct: 113 ALGQGVVYRLKDSSITVAFDD---IPEDGLNSPLRLEKLANEV----------TYRRMKD 159
Query: 898 NLVQLF--LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIK 955
LVQL +Q+ S+ L ++ E P S V P K+L++ Q+ AI K
Sbjct: 160 ALVQLSKGIQTGPSANLIPVLFG-ENPPMSSKDVAKFSPF------NKNLDESQKDAISK 212
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDF 1015
L ++D L+ G PGTGKT+T++ + + RG+ IL + +N AVDN++ +L
Sbjct: 213 ALRSRDVFLLHGPPGTGKTTTIIEIILQEVKRGSKILACAASNIAVDNIVERLSRYRTKL 272
Query: 1016 VRIG------------------------------RHEVVHKEIQKHCLSAMNINSVEEIK 1045
VR+G R E+ K + L A + N+ +I+
Sbjct: 273 VRLGHPARLLPQVLDSALDAQVLRADNSSLAGDIRKEM--KVLNSKLLKAKDKNTKRDIR 330
Query: 1046 KRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPV 1086
K L D +K VV T G ++ L FD+ I+DEA Q
Sbjct: 331 KELRTLAKEERKRQQLAVADVIKNADVVLSTLTGASSKKLDGITFDLVIIDEAAQALEMA 390
Query: 1087 SLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQYRM 1145
L+ + VL GDH QLPP +QS EA + GM +LF RL+E + Q S L QYRM
Sbjct: 391 CWIALLKGPRCVLAGDHLQLPPTIQSAEAEKKGMGKTLFERLTEAYGDQITSMLTIQYRM 450
Query: 1146 CQGIMELSNALIYGDRLSCGS---DEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD 1202
+ IM S+ +Y +++ S D + +V SS P +I ++T
Sbjct: 451 HELIMNWSSKELYNNKIKAHSSVADHMLYDIEEVKRSSSTEP----------TIILIDTT 500
Query: 1203 MLPAYEAKDHQ--TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR----H 1256
E KD + T+N A IA + LV++ + DIGIITPY +Q ++
Sbjct: 501 GCDMEEVKDEEESTMNEGEAAVSIAH-AKLLVESGVRASDIGIITPYAAQVTCLKMMRNK 559
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+ +EI T+D +QGR+K+ I++S VRS+ L D R+NVA+TRA+++
Sbjct: 560 DTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDHRRMNVAVTRARRQCC 616
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
+V T+S LK L+ E L+
Sbjct: 617 LVCDVETVSNDKFLKRLVEYFEENGEYLS 645
>gi|115433256|ref|XP_001216765.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189617|gb|EAU31317.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 701
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 216/480 (45%), Gaps = 86/480 (17%)
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
F + + P + + +++LND Q+ AI L A D ALI G PGTGKT T++ +
Sbjct: 204 FGHTTPLAPPPETNVDFEDETLNDSQKEAIRFALAAPDVALIHGPPGTGKTHTLIELIVQ 263
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS--- 1040
L+ RG +L+ +N +VDN++ +L + + VRIG + + H L + S
Sbjct: 264 LVRRGQRVLVCGPSNISVDNIVERLAPKEVSVVRIGHPARLLPSVLDHSLEVLTQTSEAA 323
Query: 1041 --VEEIKKRLDQ------------------------------------------VKVVAV 1056
V ++++ +D+ VV
Sbjct: 324 AIVRDVRREMDEKHASIRKTRFGREKRAIYQDIKELRREFREREARCVDNLVRGSSVVLA 383
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA- 1115
T G L ++KFDV ++DEA Q PL+ A K VL GDH QLPP V+S
Sbjct: 384 TLHGAGGHQLRNQKFDVVVIDEASQALEAQCWIPLLTAPKVVLAGDHLQLPPTVKSKAGD 443
Query: 1116 ---------------RENGMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYG 1159
R +E ++F RL H AI L +QYRM + IM + +Y
Sbjct: 444 APPQDGAAEGDADVVRGISLETTMFDRLLAMHGPAIKRMLTTQYRMHERIMRFPSDELYE 503
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT-----------DMLPAYE 1208
RL +A +K L ++E + PV+F +T + + E
Sbjct: 504 GRL------MAADAVKARLLKDLPYEVQETDDTREPVVFWDTQGGDFPEKTEDNEVGQKE 557
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIH 1266
A ++ +N +EA ++ K LV+ + +DI +ITPYN Q ++ L +E+
Sbjct: 558 ALLGESKSNEMEALVVGKHVDALVQAGVRPEDIAVITPYNGQLAVLSQMLREKYPGLELG 617
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
++D +QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L + G T+S+
Sbjct: 618 SVDGFQGREKEAVVVSLVRSNS---KHEVGFLGERRRLNVAMTRPKRHLCVCGDSETISR 674
>gi|14590762|ref|NP_142832.1| DNA-binding protein [Pyrococcus horikoshii OT3]
gi|3257320|dbj|BAA30003.1| 656aa long hypothetical DNA-binding protein [Pyrococcus horikoshii
OT3]
Length = 656
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 166/279 (59%), Gaps = 19/279 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L PL +F+L GDH QLPP + S EA+E + +LF L E
Sbjct: 378 YDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILSLEAQE--LSHTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL----SSCSPWL 1186
+P L QYRM + IME + Y R+ + + N I + DL ++ W
Sbjct: 436 RYPWKSEMLTIQYRMNERIMEFPSKEFYDGRI-VADERVKN--ITLGDLGIKVNATGIW- 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
++ L+P ++F++T ML + + ++ NP+EA +++KI ++L+++ ++ + IG+
Sbjct: 492 RDILDPSNVLVFIDTCMLDNRFERQRRGSESRENPLEAKIVSKIVEKLLESGVKAEMIGV 551
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI SL+V VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 552 ITPYDDQRDLI--SLNVPEEVEVKTVDGYQGREKEVIILSFVRSN---KVGEIGFLKDLR 606
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NV+LTRAK+KLIM+G TLS K LI V E+
Sbjct: 607 RLNVSLTRAKRKLIMIGDSSTLSSHETYKRLIEHVREKG 645
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
SQ +S+ +KSLN QR+AI K L ++D+ LI G GTGKT T+V ++ + RG
Sbjct: 157 SQGEEVSFEPFDKSLNSSQRKAIAKGLGSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNK 216
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+L T+ +N AVDNL+ +L + VR+G V + + + L+ +
Sbjct: 217 VLATAESNVAVDNLVERLAKDGVKIVRVGHPSRVSRHLHETTLAYL 262
>gi|315045920|ref|XP_003172335.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
gi|311342721|gb|EFR01924.1| DNA-binding protein SMUBP-2 [Arthroderma gypseum CBS 118893]
Length = 717
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 156/577 (27%), Positives = 261/577 (45%), Gaps = 105/577 (18%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T + + +F R G+ D L ++W + ++ + R N+ +
Sbjct: 135 GVVTRVGERAIWAAFGD--RGKGKQDEDGVDELWGRKLWLV---KLANDVTYRRMNMTMM 189
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDY 962
L+ Q S+ ++I L S F L ++ + SLN Q+ AI L +++
Sbjct: 190 KLEKMQESEYSQLIRVLFGHTTPSPLDFESVGQLEFM--DGSLNGSQKEAIRFALASREI 247
Query: 963 ALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHE 1022
ALI G PGTGKT T++ ++ L+ R +L+ +N +VDN++ +L SQ + VRIG
Sbjct: 248 ALIHGPPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLASQKVSLVRIGHPA 307
Query: 1023 VVHKEIQKHCLSAMNINS-----VEEIKKRLD---------------------------- 1049
+ + H L ++ S V++++K +D
Sbjct: 308 RLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDLKQASIRKTRNGRERRAIYGDLRELRKE 367
Query: 1050 --------------QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+VV T G L ++KFDV I+DEA Q PL+ AS
Sbjct: 368 FRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVIIDEASQAREAQCWIPLLSAS 427
Query: 1096 KFVLVGDHYQLPPLVQSTEARENG-------------------------MEISLFRRLSE 1130
K +L GDH QLPP ++S + + G +EI+LF RL
Sbjct: 428 KVILAGDHLQLPPTIKSRSSSKPGQNNSALWDKEDLDLTELSNKFDMRNLEITLFDRLLS 487
Query: 1131 EHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
H AI L +QYRM Q IM+ + +Y +L IA ++ L +++
Sbjct: 488 LHGTAIKRMLTTQYRMHQKIMDFPSGELYESKL------IAADAVRERLLKDLPYEIEDI 541
Query: 1190 LNPCRPVIFVNT---DML---PAYEAKDHQTL-----NNPVEACLIAKITQELVKNEIEG 1238
+ P++F +T D L P + ++L N +EA ++A+ + LV +
Sbjct: 542 DDTIEPLVFYDTQGGDFLEKSPDSTSISAKSLLVESKCNDMEAEVVARHVENLVSAGVRP 601
Query: 1239 KDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
+DI +ITPYN+Q L+ L ++E+ ++D +QGR+K+ ++VS VRS+ +
Sbjct: 602 EDIAVITPYNAQVALLSQLLKQKFPTLELGSVDGFQGREKEAVVVSLVRSNSDHE---VG 658
Query: 1297 LLGDWHRIN-VALTRAKKKLIMVGSCRTL-SKVPLLK 1331
LG+ R+N VA+TR ++ L + G T+ S P LK
Sbjct: 659 FLGEKRRLNAVAMTRPRRHLCICGDSETVGSGSPFLK 695
>gi|448305979|ref|ZP_21495900.1| hypothetical protein C495_16780 [Natronorubrum sulfidifaciens JCM
14089]
gi|445587204|gb|ELY41470.1| hypothetical protein C495_16780 [Natronorubrum sulfidifaciens JCM
14089]
Length = 743
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/404 (32%), Positives = 205/404 (50%), Gaps = 43/404 (10%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
E LND Q +A + +A I G PGTGKT T+ V+ + +G S+L+T+++N AV
Sbjct: 333 EIELNDYQYQAHLWADSANAVVCIHGPPGTGKTRTLTAYVRHAVEKGQSVLVTAHSNQAV 392
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQK--HCLSAMNI-----NSVEE---IKKRLDQV 1051
DNLL+ ++S + +H Q LS + NSV E + + L
Sbjct: 393 DNLLVGDSTRSS-----PEEDTLHAMAQDPDMDLSIARVGNNTRNSVVEANYVGRSLKAA 447
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQ 1111
V+A T G ++ +FDV ++DEA Q + P + L A K VL GDH QLPP
Sbjct: 448 DVIAATTSGASH--FDQNEFDVAVVDEATQASRPATAIALNCAQKLVLAGDHKQLPPYCA 505
Query: 1112 STEARENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
++ M ISLF L E + IS L+ QYRM + I N YG
Sbjct: 506 DESMQDEEMHISLFEYLLERYSDDISVLLRKQYRMNEEIAAFPNDAFYG----------- 554
Query: 1171 NAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
K+K +D C W ++ +P++ V+ D EA + +L N EA +AK +
Sbjct: 555 -GKLKTAD--RCRDW---TVDDLKPIMGVDIDGDEQREAHGN-SLYNIEEAEAVAKQVKL 607
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSLSV------SSVEIHTIDKYQGRDKDCILVSFV 1284
LV++ ++ DIG+IT Y+ Q + ++ + V++ TID +QG +++ I++SFV
Sbjct: 608 LVQSGLDPSDIGVITAYSGQVRKVIDRVNRLDIYDPTRVDVDTIDSFQGGEREAIIISFV 667
Query: 1285 RSSENPRNCTSSLLGDW-HRINVALTRAKKKLIMVGSCRTLSKV 1327
RS+E + + R+NVALTRA+K+L+++G+ TL V
Sbjct: 668 RSNEEGHSGFLEFPEEGPRRLNVALTRARKRLVLIGNWDTLGTV 711
>gi|340905007|gb|EGS17375.1| DNA polymerase alpha-associated DNA helicase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 890
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 219/474 (46%), Gaps = 86/474 (18%)
Query: 930 FSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
S+DP + I W +K+LND Q+ AI L +K+ ALI G PGTGKT T++ + LL R
Sbjct: 398 LSKDPEVGNIEWFDKTLNDSQKDAIRFALASKEIALIHGPPGTGKTHTLIELILQLLSRN 457
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
IL+ +N +VDN++ +L I +R+G + I + L + S V++
Sbjct: 458 LRILVCGPSNISVDNIVERLAPHQIPLIRLGHPARLLPSILPYSLDILTRTSDASAIVQD 517
Query: 1044 IKKRLDQV------------------------------------------KVVAVTCLGI 1061
I+ +D + KVV T G
Sbjct: 518 IRSEMDTLQSSIRKTRSGRERRAIYAQLKDLRKEYRERERRCVDELIKGSKVVLATLHGA 577
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS------TEA 1115
L ++FDV I+DEA Q L+ A K V GDH QLPP ++S A
Sbjct: 578 GGFQLRQEQFDVVIIDEASQALEAQCWVALLAAKKAVCAGDHLQLPPTIKSLNSSKGASA 637
Query: 1116 RENG--MEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
++ G +E +LF RL H I L +QYRM + IM + +Y +L +A
Sbjct: 638 KKGGPSLETTLFDRLLALHGSGIKRMLTTQYRMHEKIMRFPSDELYDGKL------VAAP 691
Query: 1173 KIKVSDLSSCSPWLKEALNPCRPVIFVNTDM--LPAYEAKD-----------------HQ 1213
++ L ++E P+IF++T P D +
Sbjct: 692 RVGDRLLKDLPYGVEETDETTEPLIFIDTQGGDFPEKNEDDSDQQDGSKKKLTKGMIYSE 751
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQ 1272
+ +N +EA L+ + ++LV+ ++ +DI ++TPYN+Q A L +E+ ++D +Q
Sbjct: 752 SKSNEMEAALVRQHVRKLVEAGVKAEDIAVVTPYNAQLAILAPLKDEFPGIELGSVDGFQ 811
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
GR+K+ ++VS VRS NP + LG+ R+NVA+TR K+ L ++G T+ K
Sbjct: 812 GREKEAVIVSLVRS--NP-DGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 862
>gi|357044126|ref|ZP_09105810.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
gi|355367676|gb|EHG15104.1| hypothetical protein HMPREF9138_02282 [Prevotella histicola F0411]
Length = 632
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 218/447 (48%), Gaps = 77/447 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +VL AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 191 LNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINEALMRESQVMVCAQSNMAVDWI 250
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH-----------CLSAMNIN----- 1039
KL + I+ +RIG V+ ++ + H + + N
Sbjct: 251 CEKLVDRGINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNNRKRGS 310
Query: 1040 -----SVEEIKKR------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++ +K R D+ +VVA T +G + ++ +KF +DEA Q
Sbjct: 311 ESYHQKMDRLKSRATELEIRINTELFDEARVVASTLVGANSRVMEGQKFTTLFIDEAAQA 370
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+ AS+ + GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 371 LEAACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVENKPEVVTLLKVQ 430
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD 1202
YRM + IM S+ Y ++ ++ +IK + L+ P+++++T
Sbjct: 431 YRMNEEIMRFSSDWFYHGQI------VSAPQIKYRGI----------LDYDNPMVWIDTS 474
Query: 1203 MLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNEI--EGKDIGIITPYNSQANLI 1254
+ E ++ N EA L K QE K I E D+G+I+PY +Q +
Sbjct: 475 DELSKEQFVGESFGRINKGEAELTLKTLQEYFMKIGKQRILDERIDVGVISPYRAQVQYL 534
Query: 1255 RHSLSV--------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
R + S + ++T+D +QG+++D IL+S VRS+E + L D R+NV
Sbjct: 535 RSLIKKREFFKPYRSLISVNTVDGFQGQERDVILISLVRSNEEGQ---IGFLNDLRRMNV 591
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
A+TRA+ KLI++G+ TL++ P K L
Sbjct: 592 AITRARMKLIILGNVATLTRHPFYKKL 618
>gi|256840040|ref|ZP_05545549.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256738970|gb|EEU52295.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 640
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 218/465 (46%), Gaps = 85/465 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AK +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 188 LNRSQEEAVNKVLGAKQVSIVHGPPGTGKTTTLVEAIYETLHRENQVIVCAQSNTAVDCI 247
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH---------------CLSAMNINS 1040
KL + I+ +RIG ++ + + H S M S
Sbjct: 248 SEKLVDRGINVLRIGNPTRINDKMLSFTYERRFESHPDYPELWSIRKAVRDIQSNMRKKS 307
Query: 1041 VEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
EE I+ RL D+ +VVA T +G N ++ ++ F +DE
Sbjct: 308 REERDTIRNRLSRLKFRATELEVKIDTELFDEARVVACTLVGSANRVMMNRHFTTLFIDE 367
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G+ +L ++++ P+ +S
Sbjct: 368 AAQALEAACWIAIGKADRVILAGDHHQLPPTIKCIEAEREGLGRTLMQKIAHTKPETVSL 427
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y + L + +++ P+++
Sbjct: 428 LKIQYRMHEDIMRFSSQWFYHNELESAPEVSGRGILRLDT----------------PIVW 471
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACL--------IAKITQELVKNEIEGKDIGIITPYN 1248
+T E +T++ N EA L I KI++E V E D G+I+PY
Sbjct: 472 FDTSECDFTENTREETMSRVNRQEAELLVEQLRSYIQKISKERVLE--EHIDFGLISPYK 529
Query: 1249 SQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+Q IR + + + +HT+D +QG+++D IL+S VR++E+ + L D
Sbjct: 530 AQVQYIRKLIKQDAFFKPLRRLITVHTVDGFQGQERDVILISLVRANEDGK---IGFLND 586
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+ KL+++G TL++ L N + ++ I+
Sbjct: 587 LRRMNVAITRARMKLMILGDASTLTRHAFYNELYNYISQRGKIIT 631
>gi|258573219|ref|XP_002540791.1| DNA helicase [Uncinocarpus reesii 1704]
gi|237901057|gb|EEP75458.1| DNA helicase [Uncinocarpus reesii 1704]
Length = 725
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 162/579 (27%), Positives = 255/579 (44%), Gaps = 121/579 (20%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRID--------KDEIMTSFSV 894
G++T + V ++F R PG+ ADSL ++W + + E MT
Sbjct: 153 GVVTRVGERSVWIAFDDRGR-PGKQDDEGADSLWGQKLWLVKLANDITHRRMEKMTESDH 211
Query: 895 MRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
R+ V LF + SS P + SGS ++ +I + SLND Q+ AI
Sbjct: 212 TRFMQV-LFGHTTPSS-----------PDWASGS------SIDFI--DPSLNDSQKAAIR 251
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
L + + ALI G PGTGKT T++ + L+ R IL+ +N +VDN++ +L I
Sbjct: 252 FALASHEIALIHGPPGTGKTHTLIELILQLVRRNLRILVCGPSNISVDNIVERLAPHKIP 311
Query: 1015 FVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ------------------- 1050
VRIG + + H L + S V+++++ ++Q
Sbjct: 312 LVRIGHPARLLSSVLDHSLEVLTQTSDSAAIVKDVRREIEQKQASIRKTRSGRERREIYK 371
Query: 1051 -----------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
KVV T G L ++KFDV ++DEA Q
Sbjct: 372 DLKELRKEFREREARCVDSLVTGSKVVLATLHGSGGHQLRNQKFDVVLIDEASQALEAQC 431
Query: 1088 LGPLMFASKFVLVGDHYQLPPLVQSTEARENG-------------------------MEI 1122
PL+ ASK +L GDH QLPP ++S + + +E
Sbjct: 432 WVPLLSASKAILAGDHLQLPPTIKSVTTKISSSAAKPKSFEEDHHADLSMSKLSIETLET 491
Query: 1123 SLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+LF RL H I L +QYRM + IM ++ +Y RL IA +K L
Sbjct: 492 TLFDRLLSLHGADIKRMLTTQYRMHEKIMSFPSSELYESRL------IAADHVKARLLRD 545
Query: 1182 CSPWLKEALNPCRPVIFVNT--DMLPAYEAKDHQTL----NNPVEACLIAKITQELVKNE 1235
+++ + P++F +T D P + L +N +E ++A+ L+
Sbjct: 546 LPYEVQDTDDTREPLVFYDTQGDEFPERTEEAELLLADSKSNDLEGAIVARHVGNLIAAG 605
Query: 1236 IEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
+ +DI +ITPYN+Q L+ L +EI ++D +QGR+K+ ++VS VRS NP
Sbjct: 606 VVEEDIAVITPYNAQVALLAQLLKEKYPGLEIGSVDGFQGREKEAVVVSLVRS--NPERE 663
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLK 1331
LG+ R+NVA+TR ++ L + G T+S+ P LK
Sbjct: 664 V-GFLGEKRRLNVAMTRPRRHLCVCGDSETISRGSPFLK 701
>gi|296218993|ref|XP_002755681.1| PREDICTED: DNA-binding protein SMUBP-2 [Callithrix jacchus]
Length = 1008
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 274/588 (46%), Gaps = 98/588 (16%)
Query: 812 GAAIPTKDMDCTLRSGDYVIL---STESDRLAVASGLITEISRFHVSVSFSKP----LRL 864
AA+P+ + SGD V L + E +LA +G++T ++ V+V+F + L L
Sbjct: 75 AAALPSN----SFTSGDIVGLYDAAHEGSQLA--TGILTRVTPRSVTVAFDESHDFQLSL 128
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPR 923
NS +R+ K ++ ++ L+ L S +S L ++ AP
Sbjct: 129 DRENS-----------YRLLKLANDVTYKRLKKALIALKKYHSGPASSLIEVLFGRSAP- 176
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
S S+ L++ + L+ Q+ A+ L+ K+ A+I G PGTGKT+T+V +
Sbjct: 177 ----SPASEIGPLTFFNT--CLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQ 230
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS--- 1040
+ +G +L + +N AVDNL+ +L +R+G + + IQ+H L A+ S
Sbjct: 231 AVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSA 290
Query: 1041 --VEEIKKRLDQV------------------------------------------KVVAV 1056
V +I+K +DQV VV
Sbjct: 291 QIVADIRKDIDQVFVRNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLA 350
Query: 1057 TCLGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
T G + LL + FD+ ++DE Q PL+ A + +L GDH QLPP S
Sbjct: 351 TNTGASADGPLKLLPEGHFDMVVIDECAQALEASCWIPLLQAGRCILAGDHKQLPPTTVS 410
Query: 1113 TEARENGMEISLFRRLSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
A G+ +SL RL+ E+ + L QYRM Q IM ++ +Y +L+ +A
Sbjct: 411 HRAALAGLSLSLMERLANEYGVSVVRTLTVQYRMHQAIMRWASEAMYLGQLTA-HPSVAG 469
Query: 1172 AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQ 1229
++ DL P + P++ V+T + E +D Q+ NP E L++ Q
Sbjct: 470 HLLR--DL----PGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQ 523
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSS 1287
LV + +DI +++PYN Q +L+R SL+ +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 524 ALVDAGVPARDIAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSN 583
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R L + RINVA+TRA++ + ++ T++ LK L+
Sbjct: 584 ---RKGEVGFLAEDRRINVAVTRARRHVAVICDSHTVNHHAFLKTLVE 628
>gi|301614127|ref|XP_002936547.1| PREDICTED: DNA-binding protein SMUBP-2-like, partial [Xenopus
(Silurana) tropicalis]
Length = 912
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 161/580 (27%), Positives = 275/580 (47%), Gaps = 84/580 (14%)
Query: 823 TLRSGDYVIL-STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHE-V 880
+L SGD V L S +A+G++ +++ V+V+F + SS+D+ +L E
Sbjct: 9 SLTSGDIVGLYEASSPNEQLATGIVAGVTQKVVNVAFDE--------SSNDSLNLGTECT 60
Query: 881 WRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+ K ++ ++ L L +S Q+S L ++ P S SV + +
Sbjct: 61 YRLLKLANDVTYKRIKRALTALGQYRSGQASSLIDVLFCSSEP---SHSVQKRQVEFFNL 117
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
SL+D Q+ A+ L ++ A+I G PGTGKT+T+V + + G +L + +N
Sbjct: 118 ----SLDDSQKEAVSFSLNQREVAVIHGPPGTGKTTTVVEIILQAVKEGLKVLCCAPSNV 173
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQ---- 1050
AVDNL+ +L +R+G + + +Q H L A+ N V +I++ +DQ
Sbjct: 174 AVDNLVERLSVFKEKILRLGHPARLLESLQHHSLDAVLARSDNAQIVADIRRDIDQTFAK 233
Query: 1051 --------------------------------------VKVVAVTCLG--ITNPL--LTD 1068
V+ T G + PL L +
Sbjct: 234 MKKLHGKQEKSGYRTEIKALRKELKEREEAAMVETLKRANVILATNTGASLDGPLKLLPE 293
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FD+ ++DE Q L+ A K +L GDH QLPP + S +A NG+ +SL R+
Sbjct: 294 DYFDLVVIDECAQALEASCWISLLQAKKCILAGDHKQLPPTIISHKAAANGLSLSLMERV 353
Query: 1129 SEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
+E++ + + L QYRM Q IM+ ++ +YG RL+ S ++ +K DL S +
Sbjct: 354 TEKYGEKVVKMLTVQYRMHQSIMQWASEALYGGRLTAHSS-VSQHLLK--DLPGVSVTEE 410
Query: 1188 EALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
++ P++ ++T + E +D Q+ NP E L+ Q L K ++ +DI +I
Sbjct: 411 TSI----PLLLIDTAHCGLFEMEVEDEQSKGNPGEVQLVDLHIQALTKAGVKPQDIAVIA 466
Query: 1246 PYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN Q +++R L +EI ++D +QGR+K+ +++SFVRS+ L + R
Sbjct: 467 PYNLQVDMLRQCLRQRYPDLEIKSVDGFQGREKEAVVLSFVRSNSKGE---VGFLAEDRR 523
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
INVA+TRA++ + ++ T+ LK LI E +
Sbjct: 524 INVAVTRARRHVAVICDSHTVGNHQFLKDLITYFSEHGEV 563
>gi|15679629|ref|NP_276746.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
gi|2622761|gb|AAB86107.1| transcriptional control factor (enhancer-binding protein)
[Methanothermobacter thermautotrophicus str. Delta H]
Length = 642
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 155/270 (57%), Gaps = 19/270 (7%)
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
+FDV I+DEA Q T+P L PL A +F+L GDH QLPP + S +A E +E +LF L
Sbjct: 362 RFDVAIVDEASQATIPSILIPLARAPRFILAGDHRQLPPTILSRDASE--LERTLFEELI 419
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVSDLSSCSPW 1185
+ HP L QYRM IME N Y R+ S I + V D C
Sbjct: 420 KRHPGRSRMLNCQYRMHPAIMEFPNREFYDGRIRAHPSLEDISIRDIIEDVPDSDIC--- 476
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEA--KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
+ L PV+F++T L E K ++ NP+EA L I++ L++ ++ ++IGI
Sbjct: 477 --QKLADPDPVLFIDTSGLDGCERRLKGSTSIQNPLEADLAVIISRSLMRMGVKPEEIGI 534
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q +LI S+ VE++++D +QGR+KD I++S VRS+ RN + L D R
Sbjct: 535 ITPYDDQVDLIS---SMIDVEVNSVDGFQGREKDVIIISMVRSN---RNGSIGFLKDLRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
+NV+LTRA++KLI++G RTLS P + L
Sbjct: 589 LNVSLTRARRKLIIIGDSRTLSAHPSYRRL 618
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ QR AI L ++D+ LI G GTGKT T+ ++ +MRG+ +L+T+ +N+AVDNL
Sbjct: 157 LNESQRDAIRMALGSEDFFLIHGPFGTGKTRTLHELIRQEVMRGSRVLVTAESNAAVDNL 216
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKV 1053
L + + VR+G + V +E + L+ N E K R Q K+
Sbjct: 217 LEGIAGH-VKCVRLGHPQRVSRENLRETLAYKIENHPEYSKVREYQEKI 264
>gi|215539488|gb|AAI71648.1| Ighmbp2l protein [Danio rerio]
Length = 993
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 231/471 (49%), Gaps = 74/471 (15%)
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKA 983
+ + S AL + + L+D Q+ A+ ++ KD A+I G PGTGKT+T+V +
Sbjct: 171 YSEPGILSHQYALEF--NNTKLDDSQKEAVSFAISQKDVAIIHGPPGTGKTTTVVEVILQ 228
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NI 1038
+ + +L + +N AVDNL+ +L + +R+G + + IQKH L A+ N
Sbjct: 229 AVKQQQKVLCCAPSNVAVDNLVERLAKNKVKVLRLGHPARLLESIQKHSLDAVLAHSDNT 288
Query: 1039 NSVEEIKKRLDQV------------------------------------------KVVAV 1056
N + +I+K +D+ V+
Sbjct: 289 NIISDIRKDMDKAFNEIKKARDKGQRSNLRREIGELRRELRTREETSISQILKRADVILA 348
Query: 1057 TCLGITN--PL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
T G ++ PL L + FD+ ++DE Q L+ A K +L GD+ QLPP ++S
Sbjct: 349 TNTGASDDGPLKHLPNDHFDLVVIDECAQALESSCWIALLKARKCILAGDYKQLPPTIKS 408
Query: 1113 TEARENGMEISLFRRLSEEHPQA-ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
A G+ +SL RL +++ + + L +QYRM IM+ ++ +Y +L IA+
Sbjct: 409 QSAASKGLSVSLMERLIKKYGDSVVRMLTTQYRMNSAIMQWASEQMYQGKL------IAH 462
Query: 1172 AKIK---VSDLSSCSPWLKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAK 1226
++ + DL+ + + + P++ V+T L E D Q+ N E ++A
Sbjct: 463 PSVEKHLLRDLAGVADVEETRI----PLLLVDTAGCGLNEMENTDEQSKGNQGEVDIVAL 518
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFV 1284
+ L + ++ KDI II PYN Q +L+R LS + +EI ++D +QGR+K+ +++S V
Sbjct: 519 HIKALTEAGVQVKDIAIIAPYNLQVDLLRQKLSHKYAELEIKSVDGFQGREKEAVVLSLV 578
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RS+ R L + RINVA+TRA+++L++V +T+ LK L++
Sbjct: 579 RSN---RKGEVGFLAEDRRINVAVTRARRQLVVVCDSQTVRNHDFLKSLVD 626
>gi|317037841|ref|XP_001402440.2| DNA helicase [Aspergillus niger CBS 513.88]
Length = 714
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 227/486 (46%), Gaps = 100/486 (20%)
Query: 922 PRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P +DS G++ DP +LND Q+ AI L A++ ALI G PGTGKT T++
Sbjct: 221 PDYDSIGALEFTDP---------TLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIEL 271
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
+ ++ R +L+ +N +VDN++ +L + + VRIG + + H L + S
Sbjct: 272 IVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTS 331
Query: 1041 -----VEEIKKRLDQVK------------------------------------------V 1053
V +++K +DQ + V
Sbjct: 332 EAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVENLVRESSV 391
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
V T G L ++KFDV I+DEA Q PL+ ASK VL GDH QLPP V+ST
Sbjct: 392 VLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKST 451
Query: 1114 ------------------EAREN-GMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELS 1153
E EN +E +LF RL H I L +QYRM + IM+
Sbjct: 452 KENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMHEKIMQFP 511
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-LKEALNPCRPVIFVNT----------D 1202
+ +Y +L +D + + +K DL P+ ++E + P++F +T D
Sbjct: 512 SDELYDSKL-MAADSVKDRLLK--DL----PYEVEETDDTKEPLVFWDTQGGDFPEKTED 564
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
+A ++ +N +EA ++++ LV I +DI +ITPYN Q ++ L
Sbjct: 565 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLREKY 624
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
S+E+ ++D +QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L + G
Sbjct: 625 PSIELGSVDGFQGREKEAVVVSLVRSNSEHE---VGFLGERRRLNVAMTRPKRHLCICGD 681
Query: 1321 CRTLSK 1326
T+SK
Sbjct: 682 SETISK 687
>gi|326919828|ref|XP_003206179.1| PREDICTED: DNA-binding protein SMUBP-2-like [Meleagris gallopavo]
Length = 980
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 214/448 (47%), Gaps = 66/448 (14%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SL+ QR A+ L K+ A++ G PGTGKT+T+V + + +G +L + +N AVDN
Sbjct: 187 SLDASQREAVSFSLAQKEVAIVHGPPGTGKTTTIVEIILQAVQQGLKVLCCAPSNVAVDN 246
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQV------- 1051
L+ +L +R+G + + IQ+H L A+ S V +++K +DQ
Sbjct: 247 LVERLAGYKARILRLGHPARLLEPIQQHSLDAVLARSDSAQIVADVRKDIDQAFAKSKKA 306
Query: 1052 -----------------------------------KVVAVTCLGITN----PLLTDKKFD 1072
+V T G ++ LL + FD
Sbjct: 307 QDKGERGHFLSEIKALRKELKEREETAMTAALTHASIVLATNTGASSDGPLKLLPENYFD 366
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+ ++DE Q PL+ A K +L GDH QLPP + S +A G+ +SL R+ E +
Sbjct: 367 LVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLMERVIERY 426
Query: 1133 PQ-AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ + L QYRM + IM+ +++ +YG RL+ +A +K DL P +
Sbjct: 427 GEKVVKMLTVQYRMHEAIMQWASSEMYGGRLT-AHPSVAQHLLK--DL----PGVTCTEE 479
Query: 1192 PCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P++ ++T L E +D Q+ NP E L Q LV ++ +DI ++ PYN
Sbjct: 480 TTIPLLLIDTAGCGLLELEVEDEQSKGNPGEVQLAGLHIQALVDAGVKARDIAVVAPYNL 539
Query: 1250 QANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q +++R L +EI ++D +QGR+K+ +++SFVRS+ R L + RINVA
Sbjct: 540 QVDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVA 596
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+TRA++ + ++ T+ L L+
Sbjct: 597 VTRARRHVAIICDSHTVGSQAFLGRLLE 624
>gi|358391418|gb|EHK40822.1| hypothetical protein TRIATDRAFT_226900 [Trichoderma atroviride IMI
206040]
Length = 687
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 264/595 (44%), Gaps = 112/595 (18%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
+R+GD V+++ + A A G++T + R V+V+ + D
Sbjct: 84 IRTGDIVLVAEQPAGSAKKREIKELEKKGARGVVTRVQRAAVNVAL---------DEGKD 134
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
VW + DE+ ++ M + +L + A+ S R++ L +P ++
Sbjct: 135 DVMFSGRVWMVKLADEV--TYRRMNQTMEKLQKMGEAEYSSFIRVLFGLSSPSPVPQNLS 192
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
+ D S W + +LND Q+ AI L +++ ALI G PGTGKT T++ + ++ R
Sbjct: 193 TSDEVGSIEWIDPTLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMIKRNQR 252
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
IL+ +N +VDN++ +L I +R+G + + H L + S V++++
Sbjct: 253 ILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVLNHSLDVLTQTSEAGAIVKDVR 312
Query: 1046 KRLDQ------------------------------------------VKVVAVTCLGITN 1063
+D KVV T G
Sbjct: 313 AEMDAKQASIKKTKSGKERKAIYTDLKELRKEYRERERRCVSNLVGGSKVVLATLHGAGG 372
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR------- 1116
L +++FDV I+DEA Q PL+ A K V GDH QLPP ++S ++
Sbjct: 373 FQLRNEQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTIKSLNSKVKALKVK 432
Query: 1117 --ENG--------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
++G +E +LF RL H P L +QYRM + IM + +YG L
Sbjct: 433 EGDDGTPVIRGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYGSEL--- 489
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDH---------- 1212
IA +K L ++ + P+IF++T D E D
Sbjct: 490 ---IAADAVKARLLKDLEYDVQGNEDTTEPLIFIDTQGGDFPERNEDDDKDGPKRGNLHG 546
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKY 1271
++ +N +EA L+ ++LV+ + +DI ++TPYN+Q A L +E+ ++D +
Sbjct: 547 ESKSNDMEAALVRLHVKQLVEAGVRPEDIAVVTPYNAQLAALATLKEKFPGIELGSVDGF 606
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+K+ ++VS VRS NP + LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 607 QGREKEAVIVSLVRS--NP-DGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKR 658
>gi|429849984|gb|ELA25306.1| DNA-binding protein smubp-2 [Colletotrichum gloeosporioides Nara gc5]
Length = 665
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 164/597 (27%), Positives = 262/597 (43%), Gaps = 115/597 (19%)
Query: 824 LRSGDYVILSTE----SDRLAV-------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR GD V+LS + + + V A G++T + V ++ + G+ +
Sbjct: 90 LRPGDIVLLSEQPAGNAKKREVKELESKGARGVVTRVRHESVGIAVDE-----GKGEERE 144
Query: 873 ADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQ---SAQSSQLRRMIVDLEAPRFDSGSV 929
D VW + ++ + R NL L+ A+ S R++ L +P S
Sbjct: 145 FDG---RVWVV---KVADDVTYRRMNLTMEKLEKMTEAEYSSFMRVLFGLSSPS-PVPSD 197
Query: 930 FSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+ D LS I W + SLND Q+ AI L +++ ALI G PGTGKT T++ + +L
Sbjct: 198 LASDSELSKIQWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMLKLD 257
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
IL+ +N +VDN++ +L I +R+G + + H L + S V++
Sbjct: 258 LRILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVVAHSLDVLTQTSEAGAIVKD 317
Query: 1044 IKKRLD------------------------------------------QVKVVAVTCLGI 1061
++ +D + KVV T G
Sbjct: 318 VRAEMDAKQASIKKTRNGRERRQIYGDLKELRKEFRERERRCVSNLVRESKVVLATLHGA 377
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS--------- 1112
L D++FDV I+DEA Q PL+ A K V GDH QLPP ++S
Sbjct: 378 GGHQLRDQQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTIKSLNSKVKKVL 437
Query: 1113 ----TEARENGM--EISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCG 1165
E + GM E +LF RL H +I L +QYRM + IM + +Y RL
Sbjct: 438 VEGAGEKQIKGMTLETTLFDRLLALHGSSIKRMLTTQYRMHEKIMRFPSDELYDGRL--- 494
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTL------- 1215
IA +K L +++ + P+IF++T D E D +
Sbjct: 495 ---IAAEAVKERLLKDLPYEVQDTEDTNEPLIFIDTQGGDYPEKSEDDDKDAVKKAKFSL 551
Query: 1216 -----NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTID 1269
+N +EA L+ + Q LV ++ +DI ++TPYN+Q A L +E+ ++D
Sbjct: 552 HGESKSNEMEAALVRQHAQSLVDAGVKPEDIAVVTPYNAQLAILAPLKEQFPGIELGSVD 611
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 612 GFQGREKEAVIVSLVRSNS---EGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVMR 665
>gi|265766889|ref|ZP_06094718.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253266|gb|EEZ24742.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 634
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 213/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA +NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWTAIRRADRVIFAGDHCQLPPTIKCIEAAQNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|350633858|gb|EHA22222.1| DNA helicase [Aspergillus niger ATCC 1015]
Length = 721
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 145/486 (29%), Positives = 227/486 (46%), Gaps = 100/486 (20%)
Query: 922 PRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P +DS G++ DP +LND Q+ AI L A++ ALI G PGTGKT T++
Sbjct: 228 PDYDSIGALEFTDP---------TLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIEL 278
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
+ ++ R +L+ +N +VDN++ +L + + VRIG + + H L + S
Sbjct: 279 IVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTS 338
Query: 1041 -----VEEIKKRLDQVK------------------------------------------V 1053
V +++K +DQ + V
Sbjct: 339 EAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVENLVRESSV 398
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
V T G L ++KFDV I+DEA Q PL+ ASK VL GDH QLPP V+ST
Sbjct: 399 VLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKST 458
Query: 1114 ------------------EAREN-GMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELS 1153
E EN +E +LF RL H I L +QYRM + IM+
Sbjct: 459 KENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMHEKIMQFP 518
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-LKEALNPCRPVIFVNT----------D 1202
+ +Y +L +D + + +K DL P+ ++E + P++F +T D
Sbjct: 519 SDELYDSKL-MAADSVKDRLLK--DL----PYEVEETDDTKEPLVFWDTQGGDFPEKTED 571
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
+A ++ +N +EA ++++ LV I +DI +ITPYN Q ++ L
Sbjct: 572 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLREKY 631
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
S+E+ ++D +QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L + G
Sbjct: 632 PSIELGSVDGFQGREKEAVVVSLVRSNSEHE---VGFLGERRRLNVAMTRPKRHLCICGD 688
Query: 1321 CRTLSK 1326
T+SK
Sbjct: 689 SETISK 694
>gi|255533226|ref|YP_003093598.1| DEAD/DEAH box helicase [Pedobacter heparinus DSM 2366]
gi|255346210|gb|ACU05536.1| DEAD-like helicase [Pedobacter heparinus DSM 2366]
Length = 636
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 227/493 (46%), Gaps = 96/493 (19%)
Query: 905 QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYAL 964
+ A + L +++ ++ P F V + LN Q+ A+ ++ A+ A+
Sbjct: 148 EQADNHHLIKILTGIDKPSFAEDVVH---------YPVAKLNKVQQLAVYHIVAAQQLAI 198
Query: 965 ILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
+ G PGTGKT+T+V AVK ++ + G IL+ + +N+AVD L KL + ++ +RIG
Sbjct: 199 VHGPPGTGKTTTLVQAVKTMIKQHGRQILVVAPSNTAVDLLSEKLADEGLNVLRIGNPVR 258
Query: 1024 VHKEIQKHCLSA-----MNINSVEEIKKR------------------------------- 1047
V +++ L + +I V+++KK+
Sbjct: 259 VSEKLFSLTLDSKMSAHASIKEVKDLKKQAAEYKKMAHKYKRNFGRAEKEQRKALFDEAH 318
Query: 1048 -----------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ + +VV T +G + + D+KFD ++DEAGQ P P
Sbjct: 319 KLMKAVAGAEQYIIEDLIGKAQVVTATLVGANHYTIKDRKFDTVVIDEAGQALEPACWIP 378
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
++ A K +L GDH QLPP ++S +A + G+ +L + HP A+ L+ QYRM IM
Sbjct: 379 ILKAQKVILAGDHCQLPPTIKSNDAAKAGLSTTLLEKCIALHPNAVVLLEEQYRMHTQIM 438
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
S+ + Y +L + +A + D ALN F++T E +
Sbjct: 439 AYSSKVFYEGKLKAHA-AVAGHLLFPGD---------TALN------FIDTAGCGFEEQR 482
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIE------GKDIGIITPYNSQANLIRH-------- 1256
+ ++ N EA + K +LV E IG+I+PY Q +++
Sbjct: 483 EGTSIYNSEEAVFLLKHLTQLVLKLAEVYVAENFPSIGVISPYKQQIYILKDLLLNHPVL 542
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
L + + ++TID +QG+++D + + RS+ L D R+NVA+TRA+KKL+
Sbjct: 543 QLYIEKISVNTIDSFQGQERDIVYIGMTRSN---NEGVIGFLSDIRRMNVAMTRARKKLV 599
Query: 1317 MVGSCRTLSKVPL 1329
++G TLS++P
Sbjct: 600 VIGDSATLSRLPF 612
>gi|403253185|ref|ZP_10919488.1| DNA helicase [Thermotoga sp. EMP]
gi|402811449|gb|EJX25935.1| DNA helicase [Thermotoga sp. EMP]
Length = 650
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 159/274 (58%), Gaps = 16/274 (5%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ KFVL GDH QLPP + S +A++ + +LF L
Sbjct: 377 FDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKD--LSRTLFEELIN 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP----WL 1186
+P+ S L +QYRM + +ME + Y +L ++E+ N I + DL P +
Sbjct: 435 RYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKA-AEEVKN--ITLFDLGVEIPNFGKFW 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L+P ++F++T P + KD + NP+EA ++ ++ ++L+ ++ IGI
Sbjct: 492 DVVLSPKNVLVFIDTKNRPDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGI 551
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q NLIR L + VE+H++D +QGR+K+ I++SFVRS+ +N L D R
Sbjct: 552 ITPYDDQVNLIRE-LIEAKVEVHSVDGFQGREKEVIIISFVRSN---KNGEIGFLEDLRR 607
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+NV+LTRAK+KLI G TLS P + + V
Sbjct: 608 LNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 60.8 bits (146), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V V+ RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYVRQEAARGRKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|397651076|ref|YP_006491657.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
gi|393188667|gb|AFN03365.1| dna2-nam7 helicase family protein [Pyrococcus furiosus COM1]
Length = 655
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 168/279 (60%), Gaps = 19/279 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L PL +F+L GDH QLPP + S EA+E + +LF L E
Sbjct: 378 YDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILSLEAQE--LSHTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVSDLSSCSPWL 1186
++P L QYRM + IME + Y R+ S + +A+ IKV ++ W
Sbjct: 436 KYPWKSEMLTIQYRMNERIMEFPSREFYDGRIVADESVKNITLADLGIKV---NASGIW- 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
++ L+P ++F++T ML + + ++ NP+EA +++KI ++L+++ ++ + +G+
Sbjct: 492 RDILDPNNVLVFIDTCMLENRFERQRRGSESRENPLEAKIVSKIVEKLLESGVKAEMMGV 551
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI SL+V VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 552 ITPYDDQRDLI--SLNVPEEVEVKTVDGYQGREKEVIILSFVRSN---KAGEIGFLKDLR 606
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NV+LTRAK+KLIM+G TLS + LI V E+
Sbjct: 607 RLNVSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKG 645
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
SQ +S+ +KSLN QR+AI K L ++D+ LI G GTGKT T+V ++ + RG
Sbjct: 157 SQGEEVSFEPFDKSLNPSQRKAIAKALGSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNK 216
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+L T+ +N AVDNL+ +L + VR+G V + + + L+ +
Sbjct: 217 VLATAESNVAVDNLVERLAKDGVKIVRVGHPSRVSRHLHETTLAYL 262
>gi|222099668|ref|YP_002534236.1| DNA helicase [Thermotoga neapolitana DSM 4359]
gi|221572058|gb|ACM22870.1| DNA helicase [Thermotoga neapolitana DSM 4359]
Length = 650
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 158/272 (58%), Gaps = 16/272 (5%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ KFVL GDH QLPP + S EAR+ + +LF L
Sbjct: 377 FDVVVVDEASQATIPSILIPISRGKKFVLAGDHKQLPPTILSEEARD--LSRTLFEELIR 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE-- 1188
+P+ L +QYRM + +ME + Y +L D + N I + DL SP +
Sbjct: 435 LYPEKSVLLDTQYRMNEILMEFPSREFYDGKLKA-DDSVKN--ITLLDLGVESPNFDKLW 491
Query: 1189 --ALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L+P ++FV+T P + KD + NP+EA L+ +I ++L+ ++ + IG+
Sbjct: 492 DVILSPKNVLVFVDTRNRPDRFERQRKDSPSRENPLEARLVKEIVEKLISMGVKEEWIGV 551
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q +L+R +L VE+H++D +QGR+K+ I++SFVRS+ +N L D R
Sbjct: 552 ITPYDDQVDLVR-TLLEEKVEVHSVDGFQGREKEVIIISFVRSN---KNGEIGFLEDLRR 607
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+NV+LTRAK+KLI +G TLS P + +
Sbjct: 608 LNVSLTRAKRKLIAIGDSSTLSVHPTYRRFVE 639
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ RG +L+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQETARGRKLLVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L S+ VRIG V +++ L+
Sbjct: 228 DNLVERLWG-SVSLVRIGHPSRVSPHLKESTLA 259
>gi|18976944|ref|NP_578301.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
gi|18892566|gb|AAL80696.1| dna2-nam7 helicase family protein [Pyrococcus furiosus DSM 3638]
Length = 655
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 168/279 (60%), Gaps = 19/279 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L PL +F+L GDH QLPP + S EA+E + +LF L E
Sbjct: 378 YDVAIIDEATQATIPSILIPLNKVDRFILAGDHKQLPPTILSLEAQE--LSHTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVSDLSSCSPWL 1186
++P L QYRM + IME + Y R+ S + +A+ IKV ++ W
Sbjct: 436 KYPWKSEMLTIQYRMNERIMEFPSREFYDGRIVADESVKNITLADLGIKV---NASGIW- 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
++ L+P ++F++T ML + + ++ NP+EA +++KI ++L+++ ++ + +G+
Sbjct: 492 RDILDPNNVLVFIDTCMLENRFERQRRGSESRENPLEAKIVSKIVEKLLESGVKAEMMGV 551
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI SL+V VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 552 ITPYDDQRDLI--SLNVPEEVEVKTVDGYQGREKEVIILSFVRSN---KAGEIGFLKDLR 606
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NV+LTRAK+KLIM+G TLS + LI V E+
Sbjct: 607 RLNVSLTRAKRKLIMIGDSSTLSSHETYRRLIEHVREKG 645
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 63/106 (59%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
SQ +S+ +KSLN QR+AI K L ++D+ LI G GTGKT T+V ++ + RG
Sbjct: 157 SQGEEVSFEPFDKSLNPSQRKAIAKALGSEDFFLIHGPFGTGKTRTLVELIRQEVKRGNK 216
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+L T+ +N AVDNL+ +L + VR+G V + + + L+ +
Sbjct: 217 VLATAESNVAVDNLVERLAKDGVKIVRVGHPSRVSRHLHETTLAYL 262
>gi|212693586|ref|ZP_03301714.1| hypothetical protein BACDOR_03103 [Bacteroides dorei DSM 17855]
gi|212663839|gb|EEB24413.1| putative DNA helicase [Bacteroides dorei DSM 17855]
Length = 630
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 223/455 (49%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSA---- 1035
KL + I +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGIPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGA 311
Query: 1036 ------MNINSVE----EIKKRLDQV-----KVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
+ INS++ E++ R+++ +V+A T + N +LT ++F +DEA
Sbjct: 312 ERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLTGRRFGTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + VL GDH QLPP ++ EA G++ +L + + + P+ +S L+
Sbjct: 372 QALEPACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQNKPETVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ +VN
Sbjct: 432 VQYRMNDEIMHFSSEWFYQGELKSAPE------VKYRGI----------LDYDTPIEWVN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMNCNEEFVGESFGRINKAEAALSISQLTHYI--NKIGKERFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E+ + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|406662219|ref|ZP_11070322.1| putative DNA helicase [Cecembia lonarensis LW9]
gi|405553902|gb|EKB49075.1| putative DNA helicase [Cecembia lonarensis LW9]
Length = 659
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 214/454 (47%), Gaps = 93/454 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q+ A+ V AKD A+I G PGTGKT+T+V AV L + A +L+ + +N+AVD L
Sbjct: 200 LNPSQQAALQLVSAAKDVAIIHGPPGTGKTTTLVQAVIGSLQQHAQVLVCAPSNAAVDLL 259
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA----------------------------- 1035
+ K++ + I +RIG V I L A
Sbjct: 260 VEKIREKGISTLRIGHPARVEDHILSQTLDAKITLHDSYKDLKKLKKKADEYRKLGQKYK 319
Query: 1036 MNINSVEEIKKR------------------------LDQVKVVAVTCLGITNPLLTDKKF 1071
+ S E ++++ Q +V A T +G +N +L KF
Sbjct: 320 RSFGSEERMQRKRLFDEANRLKDEAEHLEEYIMYDVFQQTQVFASTLVGASNSVLKGMKF 379
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
+ +DEA Q S P+ A K V+ GDH QLPP ++S EA + G+ +LF ++++
Sbjct: 380 PIVFIDEAAQGLEAASWIPIQKALKVVMAGDHCQLPPTIKSYEAAKAGLSETLFEKVTKR 439
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
PQ LQ QYRM + IM SN + Y + L + + S +L E
Sbjct: 440 QPQVTKMLQLQYRMPELIMGFSNKIFYQNELGAAKN-------------TESHFLSEG-- 484
Query: 1192 PCRPVI-FVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN----EIEGK--DIG 1242
PV+ F++T EA + ++L+ N EA + ++L+K +I+ K IG
Sbjct: 485 --EPVLEFIDTAGSGFVEAIEEESLSTFNQEEARFALQYLEDLLKRTGIAKIKEKRWTIG 542
Query: 1243 IITPYNSQA----NLIRHSLSVSSVE-------IHTIDKYQGRDKDCILVSFVRSSENPR 1291
+I PY +Q L+ S + ++ I +ID +QG+++D IL+S VRS+
Sbjct: 543 LIAPYRAQVRKFNELLFESYAFPNLRSFPELLTIDSIDGFQGQERDIILISLVRSNAKGE 602
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
L D R+NVALTRAK+KL+++G TLS
Sbjct: 603 ---IGFLADTRRMNVALTRAKRKLVVIGDSATLS 633
>gi|440750068|ref|ZP_20929312.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
gi|436481109|gb|ELP37290.1| dna-binding protein smubp-2 [Mariniradius saccharolyticus AK6]
Length = 642
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 212/468 (45%), Gaps = 93/468 (19%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+ LN+ Q +A+ V+ KD A+I G PGTGKT+T+V ++ L + +++T+ +N+AVD
Sbjct: 181 EGLNESQNQALGLVVATKDVAVIHGPPGTGKTTTLVASIVETLKSVSQVMVTAPSNAAVD 240
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA--------------------------- 1035
L+ KL +Q I +RIG V ++I L A
Sbjct: 241 LLVEKLVTQGIKTLRIGHPARVDEQILAQTLDAKIAQHESYKDLKRVKKSVDELRKLASK 300
Query: 1036 --MNINSVEEIKKR--LDQV----------------------KVVAVTCLGITNPLLTDK 1069
N E ++KR LD+V +VVA T +G + +L +
Sbjct: 301 YKRNYGQEERMQKRRMLDEVARARDEAAQLEDYIVYDIFQETQVVACTLVGAAHSMLDGR 360
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF V +DEA Q P P+ A K V+ GDH QLPP ++S EA + G+ +LF ++
Sbjct: 361 KFPVVFIDEAAQGLEPAVWIPVQKAQKVVMAGDHCQLPPTIKSYEAAQGGLAETLFEKVI 420
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ P A L QYRM + I S+ Y DL +
Sbjct: 421 KRKPSASHMLNVQYRMPELIAGFSSDFFYR-----------------RDLHAAPNTRYHF 463
Query: 1190 LNPCRPVI-FVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN------EIEGKD 1240
L+ PV+ F++T E + +T + NP EA + L+K + +
Sbjct: 464 LDEAEPVLEFIDTAGSGFAEQTEEETFSTFNPEEAKFCLGQLESLIKRIGIAKIKTAAWN 523
Query: 1241 IGIITPYNSQANLIRHSLSVSS-----------VEIHTIDKYQGRDKDCILVSFVRSSEN 1289
IG+I PY +Q L S + I +ID +QG+++D IL+S VRS N
Sbjct: 524 IGLIAPYKAQVRKFNELLFESYNYPNLRSFSELLTIDSIDGFQGQERDIILLSLVRS--N 581
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+N L D R+NVALTRAK+KLI+VG TLS P I+ V
Sbjct: 582 TKNEI-GFLSDTRRMNVALTRAKRKLIVVGDSATLSAHPFYHAYIDYV 628
>gi|345513474|ref|ZP_08792995.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
gi|229437375|gb|EEO47452.1| hypothetical protein BSEG_03593 [Bacteroides dorei 5_1_36/D4]
Length = 630
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSA---- 1035
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLFFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGA 311
Query: 1036 ------MNINSVE----EIKKRLDQV-----KVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
+ INS++ E++ R+++ +V+A T + N +LT ++F +DEA
Sbjct: 312 ERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLTGRRFGTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + VL GDH QLPP ++ EA G++ +L + + + P+ +S L+
Sbjct: 372 QALEPACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQNKPETVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ +VN
Sbjct: 432 VQYRMNDEIMHFSSEWFYQGELKSAPE------VKYRGI----------LDYDTPIEWVN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMNCNEEFVGESFGRINKAEAALSISQLTHYI--NKIGKERFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E+ + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|265755988|ref|ZP_06090455.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|423242331|ref|ZP_17223440.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei CL03T12C01]
gi|263234066|gb|EEZ19667.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|392639617|gb|EIY33433.1| hypothetical protein HMPREF1065_04063 [Bacteroides dorei CL03T12C01]
Length = 630
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSA---- 1035
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGA 311
Query: 1036 ------MNINSVE----EIKKRLDQV-----KVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
+ INS++ E++ R+++ +V+A T + N +LT ++F +DEA
Sbjct: 312 ERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLTGRRFGTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + VL GDH QLPP ++ EA G++ +L + + + P+ +S L+
Sbjct: 372 QALEPACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQNKPETVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ +VN
Sbjct: 432 VQYRMNDEIMHFSSEWFYQGELKSAPE------VKYRGI----------LDYDTPIEWVN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMNCNEEFVGESFGRINKAEAALSISQLTHYI--NKIGKERFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E+ + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|358377729|gb|EHK15412.1| hypothetical protein TRIVIDRAFT_184819 [Trichoderma virens Gv29-8]
Length = 690
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 156/595 (26%), Positives = 262/595 (44%), Gaps = 112/595 (18%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
+R+GD V+++ + A A G++T++ R V+V+ + D
Sbjct: 87 IRTGDIVLVAEQPAGSAKKREVKELERKGARGVVTKVQRAAVNVAL---------DEGKD 137
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
VW + DE+ ++ M + +L + A+ S R++ L +P +
Sbjct: 138 EVVFAGRVWMVKLADEV--TYRRMNQTMEKLQKMGEAEYSSFIRVLFGLSSPSPVPQDLT 195
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
+ D + W + +LND Q+ AI L +++ ALI G PGTGKT T++ + ++ R
Sbjct: 196 ASDEVGNIEWIDLTLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMIKRDQR 255
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
IL+ +N +VDN++ +L I +R+G + + H L + S V++++
Sbjct: 256 ILVCGPSNISVDNIVERLSPHKIPILRLGHPARLLPSVLNHSLDVLTQTSEAGAIVKDVR 315
Query: 1046 KRLDQ------------------------------------------VKVVAVTCLGITN 1063
+D KVV T G
Sbjct: 316 AEMDAKQASIKKTKSGKERKAIYTDLKELRKEYRERERRCVSNLVGGSKVVLATLHGAGG 375
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR------- 1116
L +++FDV I+DEA Q PL+ A K V GDH QLPP ++S ++
Sbjct: 376 FQLRNEQFDVVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTIKSLNSKVKVKSKG 435
Query: 1117 --ENG--------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
EN +E +LF RL H P L +QYRM + IM + +Y L
Sbjct: 436 GDENAAPVIRGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYDSEL--- 492
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDH---------- 1212
IA +K L ++ + PVIF++T D E D
Sbjct: 493 ---IAADAVKARLLKDLEYDVENNEDTTEPVIFIDTQGGDFPERNEDDDKENPKKGSLHG 549
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKY 1271
++ +N +EA L+ ++LV+ + +DI ++TPYN+Q A L +E+ ++D +
Sbjct: 550 ESKSNEMEAALVRLHVKQLVEAGVRPEDIAVVTPYNAQLAALASLKEKFPGIELGSVDGF 609
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+K+ ++VS VRS NP + LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 610 QGREKEAVIVSLVRS--NP-DGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKR 661
>gi|410099466|ref|ZP_11294437.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
gi|409218937|gb|EKN11903.1| hypothetical protein HMPREF1076_03615 [Parabacteroides goldsteinii
CL02T12C30]
Length = 647
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 217/447 (48%), Gaps = 87/447 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ VL+AK+ +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 190 LNTTQEEAVNHVLSAKEVSIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNTAVDWI 249
Query: 1005 LIKLKSQSIDFVRIGRHEVVH----------------------------KEIQ------- 1029
KL + I+ +RIG V+ +EIQ
Sbjct: 250 SEKLVDRGINVLRIGNPTRVNDKMLSFTYERRFESHPDYSELWGIRKAIREIQSSFRKKS 309
Query: 1030 -------KHCLSAMNINSVE-EIKKRLD---QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
++ LS + + E E++ D + +V+A T +G N +LT+ F +DE
Sbjct: 310 HSEKDTARNRLSRLRFRATELEVQIDADLFSEARVIACTLVGSANRVLTNHNFTTLFIDE 369
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH+QLPP ++ EA G++ +L ++++ P+ +S
Sbjct: 370 AAQALEAACWIAISKADRVILAGDHHQLPPTIKCIEATRGGLDRTLMQKVAAGKPETVSL 429
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y D L E+ I D PV++
Sbjct: 430 LKVQYRMHEDIMRFSSRWFYQDELQAAP-EVKYRGILAYDT---------------PVVW 473
Query: 1199 VNT-------DMLPAYEA----KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
+T D L ++ K+ + L ++A I KI++E V + E D G+I+PY
Sbjct: 474 FDTADCDFEEDQLSESQSRINKKEAELLVEQLQA-YIEKISKERVLD--ESIDFGLISPY 530
Query: 1248 NSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
SQ IR + +S + +HT+D +QG+++D I++S VR+++ L
Sbjct: 531 KSQVQYIRGLIKRNSFFKPFRKLITVHTVDGFQGQERDVIMISLVRAND---QGNIGFLN 587
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSK 1326
D R+NVA+TRA+ KLI++G TL+K
Sbjct: 588 DLRRMNVAITRARMKLIILGDASTLTK 614
>gi|342890168|gb|EGU89032.1| hypothetical protein FOXB_00444 [Fusarium oxysporum Fo5176]
Length = 1016
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 155/593 (26%), Positives = 263/593 (44%), Gaps = 110/593 (18%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR+GD V+++ + A A G++T +SR V+V+ + +
Sbjct: 415 LRTGDIVLVAEQPAGSAKKREVKDLEKKGARGVVTRVSRGWVAVAI---------DEGKE 465
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
VW + DE+ ++ M + + +L ++ ++ S R++ L +P + +
Sbjct: 466 EVGFSGRVWAVKLADEV--TYKRMNWAMEKLNKMKESEYSGFIRVLFGLSSPSPVAEDLS 523
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
+ W + +LND Q+ AI L +++ ALI G PGTGKT T++ + + G
Sbjct: 524 KDENVGDLEWFDPTLNDSQKNAIRFALLSREVALIHGPPGTGKTHTLIELILQMTKLGQR 583
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
IL+ +N +VDN++ +L I +R+G + + H L + S V++I+
Sbjct: 584 ILVCGPSNISVDNIVERLAPHKIPILRLGHPARLLPSVVDHSLDVLTQTSEAGAIVKDIR 643
Query: 1046 KRLDQ------------------------------------------VKVVAVTCLGITN 1063
+D KV+ T G
Sbjct: 644 TEMDTKQASIKKTKSGKERKAIYTDLKELRKEFRERERRCVSTLIGGSKVLLATLHGAGG 703
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-----EN 1118
L + +FDV I+DEA Q PL+ A K V GDH QLPP ++S+ A+ ++
Sbjct: 704 YQLRNDEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPPTIKSSNAKVKAPVKD 763
Query: 1119 G--------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
G +EI+LF RL H P L +QYRM + IM + +Y +L I
Sbjct: 764 GAAVTKGTTLEITLFDRLLALHGPSIKRMLTTQYRMHESIMRFPSDELYDSKL------I 817
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQT------------ 1214
A +K L +++ + PVIF++T D E D T
Sbjct: 818 AADAVKHRLLKDLEYEVQDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPRKGRAGLHGDS 877
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQG 1273
+N +EA L+ + ++LV + +DI ++TPYN+Q A L +E+ ++D +QG
Sbjct: 878 KSNEMEAALVQQHVRQLVGAGVRPEDIAVVTPYNAQLAILAPLKDKFPGIELGSVDGFQG 937
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
R+K+ ++VS VRS+ LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 938 REKEAVIVSLVRSNS---EGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVQR 987
>gi|326477246|gb|EGE01256.1| DNA-binding protein SMUBP-2 [Trichophyton equinum CBS 127.97]
Length = 716
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 161/587 (27%), Positives = 263/587 (44%), Gaps = 126/587 (21%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T + + +F R G+ D L ++W + +T + M + +L
Sbjct: 135 GVVTRVGERSIWAAFGD--RGKGKQDEDGVDELWGRKLWLVKLANDVT-YRRMNQTMAKL 191
Query: 903 -FLQSAQSSQLRRMIVDLEAPR---FDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
LQ ++ SQL R++ AP F+S G + DP SLND Q+ AI L
Sbjct: 192 EKLQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDP---------SLNDSQKEAIRFAL 242
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
+++ ALI G PGTGKT T++ ++ L+ R +L+ +N +VDN++ +L + VR
Sbjct: 243 ASREIALIHGPPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLALHKVPLVR 302
Query: 1018 IGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------- 1050
IG + + H L ++ S V++++K +D
Sbjct: 303 IGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLK 362
Query: 1051 --------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+VV T G L ++KFDV ++DEA Q P
Sbjct: 363 ELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIP 422
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEAREN-------------------------GMEISLF 1125
L+ AS+ VL GDH QLPP ++S + + +EI+LF
Sbjct: 423 LLPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDMRNLEITLF 482
Query: 1126 RRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL H I L +QYRM Q IM+ + +Y +L +D + +K DL P
Sbjct: 483 DRLLSLHGTGIKRMLTTQYRMHQKIMDFPSDELYESKL-IAADAVRERLLK--DL----P 535
Query: 1185 WLKEALNPCR-PVIFVNTD----------------MLPAYEAKDHQTLNNPVEACLIAKI 1227
+ E + R P++F +T P E+K N +EA ++A+
Sbjct: 536 YEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSPLVESK-----CNDMEAAVVARH 590
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
+ LV + +DI +ITPYN+Q L+ L ++E+ ++D +QGR+K+ ++VS VR
Sbjct: 591 VENLVSAGVRPEDIAVITPYNAQVALLSQLLKEKFPTLELGSVDGFQGREKEAVVVSLVR 650
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLK 1331
S+++ LG+ R+NVA+TR ++ L + G T+S P LK
Sbjct: 651 SNQDHE---VGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLK 694
>gi|121711100|ref|XP_001273166.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
gi|119401316|gb|EAW11740.1| DNA helicase, putative [Aspergillus clavatus NRRL 1]
Length = 760
Score = 174 bits (441), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 154/576 (26%), Positives = 252/576 (43%), Gaps = 111/576 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW--RIDKDEIMTSFSVMRYNLVQ 901
G++T + + ++F + R G S D D + E+W ++ ++ + R N
Sbjct: 148 GVVTRVGERSIWIAFGQ--RGGGGRSKED-DEAIEELWGKKLWLIKLANDVTYRRMNQTM 204
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW----SEKSLNDDQRRAIIKVL 957
+ S + R G P I ++ +LND Q+ AI L
Sbjct: 205 EKMSKMTDSDYTHFM------RVAFGHTTPMQPGYDAIGPIEITDPTLNDSQKEAIRFAL 258
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
++D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L + + VR
Sbjct: 259 ASRDVALIHGPPGTGKTHTLIELIIQMVKRKLRVLVCGPSNISVDNIVERLALKKVPIVR 318
Query: 1018 IGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK-------------------- 1052
IG + + +H L + S V++++K +D+ +
Sbjct: 319 IGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIRKTKSGRERRAIYGDLK 378
Query: 1053 ----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
VV T G L ++KFDV ++DEA Q
Sbjct: 379 ELRREYRDRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVVIDEASQALEAQCWIS 438
Query: 1091 LMFASKFVLVGDHYQLPPLVQST-----EARENG---------------------MEISL 1124
L+ ASK VL GDH QLPP V+ST A+ G +E ++
Sbjct: 439 LLSASKVVLAGDHLQLPPTVKSTVQKSKSAKTKGQSNTKSGSTDASDADIIGGVSLETTM 498
Query: 1125 FRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
F RL H I L +QYRM + IM+ + +Y RL IA +K+ L
Sbjct: 499 FDRLLALHGPGIKRMLTTQYRMHEKIMQFPSDELYESRL------IAADSVKLRLLKDLP 552
Query: 1184 PWLKEALNPCRPVIFVNT-----------DMLPAYEAKDHQTLNNPVEACLIAKITQELV 1232
++E + P++F +T D + EA ++ +N +EA ++ K L+
Sbjct: 553 YEVEETDDTKEPLVFWDTQGGDFPEKTEDDEIGKKEALLGESKSNEMEALVVVKHVDNLI 612
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
++ + +DI ITPYN Q L+ L +E+ ++D +QGR+K+ ++VS VRS NP
Sbjct: 613 QSGVRPEDIACITPYNGQLALLSSMLREKYPGLELGSVDGFQGREKEAVVVSLVRS--NP 670
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
N LG+ R+NVA+TR K+ L + G T+SK
Sbjct: 671 EN-EVGFLGEKRRLNVAMTRPKRHLCICGDAETISK 705
>gi|294877934|ref|XP_002768200.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC 50983]
gi|239870397|gb|EER00918.1| DNA-binding protein SMUBP-2, putative [Perkinsus marinus ATCC 50983]
Length = 970
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 142/480 (29%), Positives = 222/480 (46%), Gaps = 92/480 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ QRRA+ L A AL+ G PGTGKT+ +V + + R +L+ + +N AVDNL
Sbjct: 207 LNEVQRRAVRTCLDASPLALVHGPPGTGKTTVLVSYILEAIQRHQKLLVCAPSNVAVDNL 266
Query: 1005 LIKLKSQS--IDFVRIGRHEVVHKEIQKHCLSAM---------------NINS------- 1040
L ++ + + VRIG V K ++++ L A I+S
Sbjct: 267 LERVTAVGGISNVVRIGHPARVEKGLERYTLDAKLAQNDQQQLVGDIRKEIDSCLKKSKK 326
Query: 1041 -------------VEEIKKRL------------DQVKVVAVTCLGITNPLL--------- 1066
V E++K L Q VV TC L
Sbjct: 327 AKDRGARRAMQGEVRELRKELRSRERRAVSEVIQQSSVVFSTCAAAGGRTLARALENGCG 386
Query: 1067 --TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ + FDV ++DEA Q PL+ K VL GDH QL V S EA + G++ +L
Sbjct: 387 DASTRLFDVVVIDEAAQAIEAACWIPLLLGRKAVLAGDHKQLAATVLSEEAAKGGLQETL 446
Query: 1125 FRRLSE-----------EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
F RL E E P + L +QYRM + IM SNA YG L +A+
Sbjct: 447 FGRLMEMMEKSTIGEGREMPSVM--LTTQYRMNETIMGWSNAQFYGGHL------LASES 498
Query: 1174 IKVSDLSSCSP--WLKEALNPCRPVIFVNT--DMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
+K L + W + + RP+++++T D + E + ++ +N E L+AK
Sbjct: 499 VKSRTLQELTERIWADQEM-LSRPLLWIDTAVDWMHEDEVGEEESRSNSAEVALVAKYIS 557
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVE-----IHTIDKYQGRDKDCILVSFV 1284
L I+ +I+PYN Q LIR +L S+ E + ++D YQG++++ +++S V
Sbjct: 558 FLRAAGIKRDQTAVISPYNRQVGLIRDALKSSTGETDASFVSSVDSYQGQEQEVVVLSLV 617
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
RS++ L D+ R+NVA+TRAK++L++VG T+ +L L + E+ I+
Sbjct: 618 RSNDAGE---VGFLKDYRRLNVAVTRAKRQLVLVGDSETIGADDVLVTLYSYAAERGFII 674
>gi|189461769|ref|ZP_03010554.1| hypothetical protein BACCOP_02435 [Bacteroides coprocola DSM 17136]
gi|189431529|gb|EDV00514.1| putative DNA helicase [Bacteroides coprocola DSM 17136]
Length = 629
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 216/464 (46%), Gaps = 70/464 (15%)
Query: 927 GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S FS P L + W LN Q A+ KVL AKD A++ G PGTGKT+T+V V L
Sbjct: 178 ASTFSFHP-LRFPW----LNATQEEAMNKVLHAKDVAIVHGPPGTGKTTTLVEVVYETLH 232
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV------- 1023
R +L+ + +N AVD + KL + + +RIG R E
Sbjct: 233 RENQVLVCAQSNMAVDWISEKLVDRGVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQL 292
Query: 1024 --VHKEIQKHCLSAMNINSVEEIKKRLDQVK-------------------VVAVTCLGIT 1062
+ K I++ + E ++++++ +K V+A T +G
Sbjct: 293 WSIRKAIRELYARSRKGAEREAVRQKINSLKDRATELEIRINESLFSEARVIACTLVGSA 352
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
N LLT +KF +DEA Q P+ A + +L GDH QLPP V++ EA G+
Sbjct: 353 NRLLTGQKFGTLFIDEAAQALEAACWIPIRKADRVILAGDHCQLPPTVKAPEALRAGLGH 412
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
+L + + + P +S L+ QYRM IM S+ YG L + + + D +
Sbjct: 413 TLMQTIVKNKPDTVSLLKLQYRMNDEIMRFSSEWFYGGMLQSAPEVKYRS---ILDFDTP 469
Query: 1183 SPWLK-EALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
W+ E L+ I N + EA+ L+ I KI +E N E D+
Sbjct: 470 IEWINTEGLDCNEEFIGENYGRINKSEAE----LSIEQLKGYITKIGRERFLN--ERIDV 523
Query: 1242 GIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
G+I+PY +Q +R + ++ I+T+D +QG+++D IL+S VR++E +
Sbjct: 524 GMISPYKAQVQYLRRLVRNDAFFKPYRQAITINTVDGFQGQERDVILISLVRANEEGQ-- 581
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
L D R+NVA+TRA+ KLI++G TL++ K L +
Sbjct: 582 -IGFLNDLRRMNVAITRARMKLIILGDASTLTRHAFYKKLYTYI 624
>gi|237708745|ref|ZP_04539226.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|423228836|ref|ZP_17215242.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei CL02T00C15]
gi|423247648|ref|ZP_17228696.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei CL02T12C06]
gi|229457171|gb|EEO62892.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|392631541|gb|EIY25512.1| hypothetical protein HMPREF1064_04902 [Bacteroides dorei CL02T12C06]
gi|392635575|gb|EIY29474.1| hypothetical protein HMPREF1063_01062 [Bacteroides dorei CL02T00C15]
Length = 630
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 223/455 (49%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNSQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSA---- 1035
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPDYPQLWSIRKAIRELYSRSRKGA 311
Query: 1036 ------MNINSVE----EIKKRLDQV-----KVVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
+ INS++ E++ R+++ +V+A T + N +LT ++F +DEA
Sbjct: 312 ERENIRLKINSLKDRATELEIRINEALFSEARVIACTLVSSANRVLTGRRFGTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + VL GDH QLPP ++ EA G++ +L + + + P+ +S L+
Sbjct: 372 QALEPACWIAIRKADRIVLAGDHCQLPPTIKCVEAARGGLDQTLMQEIVQNKPETVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ +VN
Sbjct: 432 VQYRMNDEIMHFSSEWFYQGELKSAPE------VKYRGI----------LDYDTPIEWVN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMNYNEEFVGESFGRINKAEAALSISQLTHYI--NKIGKERFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E+ + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEDGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|15607027|ref|NP_214409.1| DNA helicase [Aquifex aeolicus VF5]
gi|2984278|gb|AAC07803.1| DNA helicase [Aquifex aeolicus VF5]
Length = 530
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 163/307 (53%), Gaps = 11/307 (3%)
Query: 1044 IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDH 1103
+ K L + +VV T + +L + FDV I+DEA Q T P L PL+ K ++ GDH
Sbjct: 229 VNKILSRAQVVCTTNSTAGSEVLQNLNFDVVIIDEATQATEPSCLIPLIKGKKLIMAGDH 288
Query: 1104 YQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRL 1162
QLPP V S EA+E + +LF RL + + + I L+ QYRM + IME SN + Y +L
Sbjct: 289 KQLPPTVLSQEAQE-ALSYTLFERLLDLYGEEIYEILRIQYRMNKKIMEFSNKMFYEGKL 347
Query: 1163 SCGSDEIANAKIK----VSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
+ N IK L K L P + V+F+N + + + N
Sbjct: 348 -IADKSVENHTIKDLINPEKLKEIPEPFKSVLEPEKVVVFINVRG-KEKQRRGSTSFYNE 405
Query: 1219 VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDC 1278
EA + KI + L+K + + IG+I+PY Q N + L VE+ T+D +QGR+K+
Sbjct: 406 EEAKVAVKIVEYLMKIGLRSEHIGVISPYEDQVNFLEELLKDFEVEVKTVDGFQGREKEV 465
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
I++SFVRS+E L D+ R+NVALTRA++KLI +G+ +TLS + K I V
Sbjct: 466 IIISFVRSNE---KGEIGFLKDYRRLNVALTRARRKLITLGNEKTLSSDEVYKQFIGYVK 522
Query: 1339 EQSGILN 1345
G +N
Sbjct: 523 SIGGYIN 529
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%)
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
L Y LN Q++A+ + L A+ LI G PGTGKT+T+V +K L G +L T
Sbjct: 39 VLVYKSGMTKLNAYQKKAVERALKAEKVFLIHGPPGTGKTTTLVECIKRLAQEGYKVLAT 98
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+ +N AVDNL+ +L +++ VR+G V K IQ+H L +
Sbjct: 99 ADSNVAVDNLVERLVRENVKVVRVGNPVRVLKTIQRHTLDYL 140
>gi|312144201|ref|YP_003995647.1| DNA helicase [Halanaerobium hydrogeniformans]
gi|311904852|gb|ADQ15293.1| DNA helicase [Halanaerobium hydrogeniformans]
Length = 749
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 165/290 (56%), Gaps = 13/290 (4%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E ++ L++ V+ T + + +L D F++ ++DEA Q+T P +L P A K VL+G
Sbjct: 444 EAVEDILNKADVICSTNITAGSEILKDFHFNLSVIDEATQSTQPATLIPYFMADKSVLIG 503
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHP-QAISALQSQYRMCQGIMELSNALIYGD 1160
DH QLPP V + +A + G+ SLF RLSE HP A+S L+ QYRM + IM S+ Y
Sbjct: 504 DHKQLPPTVINQQAAKGGLAKSLFERLSETHPTDALSTLKIQYRMNRKIMGFSSLNFYDG 563
Query: 1161 RLSCGSDEIANAKIKVSDLS----SCSPWLKEALNPCRPVIFVNTDMLPAYEA--KDHQT 1214
L + A+ + DL S + ++AL P P++F++T + A E K +
Sbjct: 564 SLRAAP---SVAQHNLGDLGVYPQSEKCFTEKALKPEYPMVFLDTKEMEASERSLKASNS 620
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGR 1274
+NPVE+ ++ I ++ +I +ITPY Q +L+ +++ +EI T+D +QGR
Sbjct: 621 YDNPVESEIVLDILDRAAMLSMDENNIAVITPYKDQVDLLNQHNNLTEIEIDTVDAFQGR 680
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+K+ ++ S VRS++ + L D R+NVALTRAK+K+I +G T+
Sbjct: 681 EKEMVVFSAVRSND---DANIGFLRDLRRLNVALTRAKRKIIFIGDSSTI 727
Score = 67.8 bits (164), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 930 FSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
F+ +SY + LN Q +AI L A+D+ LI G PGTGKT T V V + +G
Sbjct: 251 FTNTAKISY--NSDFLNQSQIKAIENSLAAEDFYLIQGPPGTGKTVTAVELVLEAVKKGN 308
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
+L T+ +N+AVDNLL L + ++ VR+G V+K+++K+ L
Sbjct: 309 KVLTTAGSNTAVDNLLELLIEKDLNVVRVGHPIRVNKKLRKNTL 352
>gi|255082057|ref|XP_002508247.1| predicted protein [Micromonas sp. RCC299]
gi|226523523|gb|ACO69505.1| predicted protein [Micromonas sp. RCC299]
Length = 1188
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 204/417 (48%), Gaps = 52/417 (12%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM-RGASILLTSYTNSAV 1001
KS D A+ + +T LI G PGTGKT T V V+ L R + IL TS +N AV
Sbjct: 655 KSQTDALEAALFQRVT-----LIQGPPGTGKTHTAVALVQMWLRNRTSPILCTSDSNIAV 709
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-------NINSVEE---IKKRLDQV 1051
DNL+ L + RIGR E V +++ + + ++ N++ ++ I L +
Sbjct: 710 DNLVDGLSRAGVRVARIGRPEAVRQDLMQFMVESIAGIEPGSNMSKDQQYQAINGVLRRA 769
Query: 1052 KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLPPLV 1110
+VV TC G + +L F C++DEA Q T P ++ PL S+ VL+GD QLPP +
Sbjct: 770 EVVCATCAGAGSDILERFSFQACLIDEATQATEPATVVPLTKGCSQVVLIGDQKQLPPTI 829
Query: 1111 QSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
S EA G+ SLF R+ +A L+ QYRM I + Y L G+ A
Sbjct: 830 ISREADAAGLGTSLFERMLARGIRAF-MLKVQYRMHPAIAAYPSKAFYSGALLSGTPPSA 888
Query: 1171 NAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
+P + P P+ FV D+ YE D + NPVEA + I ++
Sbjct: 889 RR----------APMGFDWPVPAVPLAFV--DVPDGYERSDGSSQTNPVEAQKVVNIVKK 936
Query: 1231 LVKN-EIEGKDIGIITPYNSQANLIRHSL------------------SVSSVEIHTIDKY 1271
L ++ +IGI+TPY++Q I+ L ++ ++E+ ++D +
Sbjct: 937 LAAGHDVIFGEIGIVTPYSAQVRAIKRLLNGNKPEVRSRFDAPADPNTLQALEVCSVDGF 996
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
QGR+K+ I+ R+ NP N L D R+NV LTRA++ LI++G+ TL + P
Sbjct: 997 QGREKEVIVFCCTRA--NP-NGNVGFLADPRRVNVMLTRARRGLIIIGNLGTLRRDP 1050
>gi|384249376|gb|EIE22858.1| hypothetical protein COCSUDRAFT_16037 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 173 bits (439), Expect = 5e-40, Method: Composition-based stats.
Identities = 115/323 (35%), Positives = 148/323 (45%), Gaps = 93/323 (28%)
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSL------------------------- 1088
V TCL + +PLL K FDVCIMDEAGQT LP +
Sbjct: 19 VGCTCLSVGHPLLVGKTFDVCIMDEAGQT-LPAFVFETSRPQDTIIMFQRLINPQRFVYI 77
Query: 1089 ----------GPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
L A F LVGDHYQLPPLVQ+ +A G+ SLFR L E HPQ + A
Sbjct: 78 LESDPSKLLRAALGLARSFCLVGDHYQLPPLVQNRDAAAGGLAQSLFRHLCEAHPQVLRA 137
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
+ S +K+ L+P R V++
Sbjct: 138 MLS--------------------------------------------VKQVLDPARRVLW 153
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
++TD +P E + N EA ++ +I + L + I IG+I+PY SQA RH
Sbjct: 154 LDTDGVPGPETRAADNTCNATEAAVVERIVEALADSGIPLDSIGVISPYRSQA---RHRC 210
Query: 1259 SVS--------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
S +E T+DK QGRDKD ++VS VRS N LL DW RINVALTR
Sbjct: 211 FFSGAAARGWAGLETLTVDKCQGRDKDAVIVSLVRS--NAERSAGKLLADWRRINVALTR 268
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLL 1333
K KL ++GS T++ VP+L L
Sbjct: 269 PKVKLAVIGSPATVASVPVLAAL 291
>gi|304313994|ref|YP_003849141.1| DNA helicase [Methanothermobacter marburgensis str. Marburg]
gi|302587453|gb|ADL57828.1| predicted DNA helicase [Methanothermobacter marburgensis str.
Marburg]
Length = 654
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 14/305 (4%)
Query: 1041 VEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
VE + + + +VV T + + KFDV I+DEA Q T+P L PL A +FVL
Sbjct: 345 VEIVDRIIRNSQVVLATNSSAALEYIDNVKFDVAIVDEASQATIPSILIPLSRAPRFVLA 404
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GDH QLPP + + EA E +E++LF L +P+ L QYRM IME N YG
Sbjct: 405 GDHRQLPPTILNPEASE--LEVTLFEELIGSYPENSWMLNCQYRMNPAIMEFPNREFYGG 462
Query: 1161 RLSC--GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA--KDHQTLN 1216
R+ +EI+ + +++ P K L PV+F++T + E K ++
Sbjct: 463 RIRAHPSLEEISVLDVISTEIPDSMPHRK--LAERDPVLFIDTSKVGRGERRLKGSTSIQ 520
Query: 1217 NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDK 1276
NP+EA L I L++ ++ ++IGIITPY+ Q +LI S++ VE++++D +QGR++
Sbjct: 521 NPLEADLAVIIAGALIRMGVKEEEIGIITPYDDQVDLIS---SMTGVEVNSVDGFQGRER 577
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
+ I++S VRS+ L D R+NV+LTRA++KLI++G TLS P + LI
Sbjct: 578 EVIIISMVRSNS---EGNIGFLRDLRRLNVSLTRARRKLIIIGDTGTLSSHPSYRRLIEY 634
Query: 1337 VGEQS 1341
+Q
Sbjct: 635 CRDQG 639
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN QR AI++ L + D+ LI G GTGKT T+ ++ + RG +L+T+ +N+AVDNL
Sbjct: 169 LNRSQREAIMRALGSDDFFLIHGPFGTGKTRTLHELIRQEVRRGNRVLVTAESNAAVDNL 228
Query: 1005 L 1005
L
Sbjct: 229 L 229
>gi|326800123|ref|YP_004317942.1| ATPase AAA [Sphingobacterium sp. 21]
gi|326550887|gb|ADZ79272.1| AAA ATPase [Sphingobacterium sp. 21]
Length = 630
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 210/457 (45%), Gaps = 86/457 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM-RGASILLTSYTNSAVDN 1003
LN +Q+ AI K+ +A D A+I G PGTGKT+T++ A K LL R +L+ + +N+AVD
Sbjct: 175 LNANQQLAIEKIRSANDIAIIHGPPGTGKTTTIIEACKVLLKERNCQLLVVAPSNTAVDL 234
Query: 1004 LLIKLKSQSIDFVRIGRH-----EVVHKEIQKHCLSAMNINSVEEIKKRLDQVK------ 1052
L +L I+ RIG E++H + + +I V++I+KR +Q +
Sbjct: 235 LTDQLLKAQINVTRIGSPSRVTPELLHATLDEQISQTSSIKEVKKIRKRANQFREMARRY 294
Query: 1053 ------------------------------------------VVAVTCLGITNPLLTDKK 1070
V+ T +G + + +
Sbjct: 295 KRNFGKEERIQRQTLFAEAAKLIKEADALEQYATESVIKNAQVITATLVGAGHYSIKNIC 354
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
F+ I+DEA Q P P++ A K +L GDH QLPP ++S A G++ +L +
Sbjct: 355 FEAVIIDEAAQALEPACWIPILKAKKLILAGDHQQLPPTIKSVSAANQGLKETLLEKCIH 414
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
+PQ+ LQ QYRM IM S+ Y L + +AN + +D
Sbjct: 415 LYPQSGVMLQEQYRMHTSIMSFSSQKFYQSSL-IAHNSVANTLLFPND------------ 461
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD------IGII 1244
+P+ F++T E D ++ N EA + L + + I II
Sbjct: 462 ---QPLQFIDTVGCGFDERDDEGSIYNLEEASFVLHYLSMLSTSLSQHYSPENYPRIAII 518
Query: 1245 TPYNSQANLIRH-------SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
+PY SQ + + S+ V I+TID +QG+++D +++S RS++ +
Sbjct: 519 SPYASQVDKFKALLEADPLSIYKDKVTINTIDGFQGQERDIVIISLTRSNQERK---IGF 575
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
L D R+NVA+TRAKKKL+MVG TLSK+P LI
Sbjct: 576 LSDIRRMNVAMTRAKKKLVMVGDSLTLSKLPFYADLI 612
>gi|320164041|gb|EFW40940.1| immunoglobulin mu binding protein 2 [Capsaspora owczarzaki ATCC
30864]
Length = 679
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 156/556 (28%), Positives = 259/556 (46%), Gaps = 82/556 (14%)
Query: 843 SGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQL 902
SG++ + S V+VS S+PL D LL V R+D T++ N++
Sbjct: 135 SGVVYKTSDARVTVSLSEPL----------PDYLLDCVLRLDMGANDTTYKRC-CNVISK 183
Query: 903 FLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKD 961
A SS +VD+ + S +F+ + A S I W LND QR A+ L A D
Sbjct: 184 LGLGAYSSLPCSHLVDVLFGQ--SKPLFTTEIAPSAISWLNPGLNDVQRSAVSFCLAASD 241
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGA---SILLTSYTNSAVDNLLIKL-KSQSIDFVR 1017
ALI G PGTGKT+T+V + ++MR IL +N +VDN++ +L S VR
Sbjct: 242 VALIHGPPGTGKTTTIVELINQIVMRHGPEVKILACGPSNVSVDNIVERLVASNKTSVVR 301
Query: 1018 IGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------- 1050
+G + + H L ++ S V +IK+ +D
Sbjct: 302 LGHPARMLPSVLAHSLESVMAASDAGKLVADIKREMDAATKKLARPIPRQERKELYNELK 361
Query: 1051 -----------------VKVVAVTCLGITNPLL-----TDKKFDVCIMDEAGQTTLPVSL 1088
++ VTC +T + + +D I+DEA Q+
Sbjct: 362 NLRKELKKRERDSVQQVLQSTQVTCCTLTGAMSKMIASSPINYDWVIIDEAPQSMEVHCW 421
Query: 1089 GPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQ 1147
++ + VL GDH QLPP + S A + G+ ++LF RL + + Q L QYRM
Sbjct: 422 MAILKGKRLVLAGDHKQLPPTILSDAAEKKGLSLTLFDRLIKAYGDQVTRMLTVQYRMNA 481
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
IM+ S+ +YG +L+ A+ ++ P +K+ + F++T Y
Sbjct: 482 KIMQWSSNEMYGGKLTSAPSVQAHLLCEL-------PRVKKTEETESALFFIDTTGCSLY 534
Query: 1208 --EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SV 1263
EA D ++ +N EA ++ + + L+ + +D+ +ITPYN+Q +R LSV +
Sbjct: 535 ETEAADDESKSNEGEADVVVQHVKRLLDAGVTERDMAVITPYNAQVGRLRSKLSVQYPQL 594
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI ++D +QGR+K+ +++S VRS++ L + R+NVA+TRA++ + ++G T
Sbjct: 595 EIGSVDGFQGREKEAVVISLVRSNDKRE---VGFLAEHRRLNVAITRARRHVCVIGDSDT 651
Query: 1324 LSKVPLLKLLINKVGE 1339
+S L L++ + E
Sbjct: 652 VSNDKFLGRLVDWLCE 667
>gi|296806473|ref|XP_002844046.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
gi|238845348|gb|EEQ35010.1| DNA-binding protein SMUBP-2 [Arthroderma otae CBS 113480]
Length = 720
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 156/586 (26%), Positives = 256/586 (43%), Gaps = 125/586 (21%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T + + +F R G+ D L ++W + ++ + R N +
Sbjct: 140 GVVTRVGERSIWAAFGD--RGKGKQDDDGVDELWGRKLWLV---KLANDVTYRRMNQTMM 194
Query: 903 FLQSAQSSQLRRMI-----------VDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRR 951
L+ + S+ ++I +DLE+ G + DP SLND QR
Sbjct: 195 KLEKMEESEYSQLIRVLFGHTTPSPLDLES----VGPLEFMDP---------SLNDSQRE 241
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
A+ L +++ ALI G PGTGKT T++ ++ L++R IL+ +N +VDN++ +L S
Sbjct: 242 AVRFALASREIALIHGPPGTGKTHTLIELIRQLVLRKKRILVCGPSNISVDNIVERLASH 301
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------- 1050
+ VRIG + + H L ++ S V++++K +D
Sbjct: 302 KVPLVRIGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDAKQASIRKTRNGRERRA 361
Query: 1051 --------------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
+VV T G L ++KFDV ++DEA Q
Sbjct: 362 IYGDLRELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQARE 421
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE------------------------NGM 1120
PL+ ASK +L GDH QLPP ++S + + +
Sbjct: 422 AQCWIPLLAASKVILAGDHLQLPPTIKSKVSSKPSEGNSVLRDQTDLDTNDLSKLDMRNL 481
Query: 1121 EISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
EI+LF RL H I L +QYRM Q IM+ + +Y +L IA +K L
Sbjct: 482 EITLFDRLLSLHGPGIKRMLTTQYRMHQMIMDFPSHELYESKL------IAAGAVKERLL 535
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDM--LPAYEAKDHQTLN---------NPVEACLIAKIT 1228
++E + P+IF +T P L N +EA ++A+
Sbjct: 536 KDLPYEVEETDDTREPLIFYDTQGGDFPEKSPDSTGILAKSVLVESKCNDMEAAVVARHV 595
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRS 1286
++LV + DI +ITPYN+Q L+ L ++E+ ++D +QGR+K+ ++VS VRS
Sbjct: 596 EKLVSAGVRPDDIAVITPYNAQVALLSQLLKEKFPTLELGSVDGFQGREKEAVVVSLVRS 655
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLK 1331
+ + LG+ R+NVA+TR ++ L + G T+S P LK
Sbjct: 656 N---LDHEVGFLGEKRRLNVAMTRPRRHLCVCGDSVTVSSGSPFLK 698
>gi|444510151|gb|ELV09486.1| DNA-binding protein SMUBP-2 [Tupaia chinensis]
Length = 882
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 261/536 (48%), Gaps = 68/536 (12%)
Query: 824 LRSGDYVIL-STESDRLAVASGLITEISRFHVSVSFSKP----LRLPGRNSSSDADSLLH 878
+ +GD V L ++ +A+G++T I++ V+V+F + L L NS +
Sbjct: 10 ISTGDIVGLYDAANEGKQLATGILTRITQKSVTVAFDESHDFQLNLGQENS--------Y 61
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
+ ++ D ++ ++S Q R+ E + D+G+ FS DP
Sbjct: 62 RLLKLANDVTYKRLKKEVQHIPVCIIRSCQCPFWRKYPGGREL-QADAGA-FSADP---L 116
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
+ SL+ Q+ A+ L+ K+ A+I G PGTGKT+T+V + + +G
Sbjct: 117 TFHNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQG---------- 166
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEV--VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAV 1056
+K K + +F R+E+ + KE+++ +AM EI L KVV
Sbjct: 167 -------LKDKKEKGNF----RNEIKLLRKELKEREEAAML-----EI---LTSAKVVLA 207
Query: 1057 TCLGITN----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
T G + LL + FD+ I+DE Q PL+ A K +L GDH QLPP + S
Sbjct: 208 TNTGASADGPLKLLPEGYFDLVIIDECAQALEASCWIPLLQARKCILAGDHKQLPPTIVS 267
Query: 1113 TEARENGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
A G+ +SL L EE+ +A+ L +QYRM Q IM+ ++ +Y +L+ +A
Sbjct: 268 HRAALAGLSLSLMEHLVEEYGAKAVRMLTTQYRMHQAIMQWASEAMYHGQLTA-HPSVAG 326
Query: 1172 AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY--EAKDHQTLNNPVEACLIAKITQ 1229
++ DL P + P++ V+T + E +D Q+ NP E L+ Q
Sbjct: 327 HLLR--DL----PGVATTEETGIPLLLVDTAGCGLFELEQEDDQSKGNPGEVRLVGLHIQ 380
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSS 1287
LV ++ DI +ITPYN Q +L+R SLS +EI ++D +QGR+K+ +++SFVRS+
Sbjct: 381 ALVDAGVQASDIAVITPYNLQVDLLRQSLSPRHPQLEIKSVDGFQGREKEAVILSFVRSN 440
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
R L + RINVA+TRA++ + +V T++ LK L++ E +
Sbjct: 441 ---RKGEVGFLAEDRRINVAITRARRHVAVVCDSHTVNNHAFLKTLVDYFTEHGEV 493
>gi|326471889|gb|EGD95898.1| DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 716
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 160/582 (27%), Positives = 264/582 (45%), Gaps = 116/582 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T + + +F R G+ D L ++W + +T + M + +L
Sbjct: 135 GVVTRVGERSIWAAFGD--RGKGKQDEDGVDELWGRKLWLVKLANDVT-YRRMNQTMAKL 191
Query: 903 -FLQSAQSSQLRRMIVDLEAPR---FDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
LQ ++ SQL R++ AP F+S G + DP SLND Q+ AI L
Sbjct: 192 EKLQESEHSQLIRVLFGHTAPSPLDFESVGPLEFMDP---------SLNDSQKEAIRFAL 242
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
+++ ALI G PGTGKT T++ ++ L+ R +L+ +N +VDN++ +L + VR
Sbjct: 243 ASREIALIHGPPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLALHKVPLVR 302
Query: 1018 IGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------- 1050
IG + + H L ++ S V++++K +D
Sbjct: 303 IGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLK 362
Query: 1051 --------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+VV T G L ++KFDV ++DEA Q P
Sbjct: 363 ELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIP 422
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEAREN-------------------------GMEISLF 1125
L+ AS+ VL GDH QLPP ++S + + +EI+LF
Sbjct: 423 LLPASRVVLAGDHLQLPPTIKSKSSSNSDQTNSALWDKEDLRFNELSNTFDMRNLEITLF 482
Query: 1126 RRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL H I L +QYRM Q IM+ + +Y +L +D + +K DL P
Sbjct: 483 DRLLSLHGTGIKRMLTTQYRMHQKIMDFPSDELYESKL-ISADAVRERLLK--DL----P 535
Query: 1185 WLKEALNPCR-PVIFVNT------DMLPAYEAKDHQTL-----NNPVEACLIAKITQELV 1232
+ E + R P++F +T + P ++L N +EA ++A+ + LV
Sbjct: 536 YEVEDTDDTREPLVFYDTQGGDFPEKSPDSNGISAKSLLVESKCNDMEAAVVARHVENLV 595
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +DI +ITPYN+Q L+ L ++E+ ++D +QGR+K+ ++VS VRS+++
Sbjct: 596 SAGVRPEDIAVITPYNAQVALLSQLLKEKFPTLELGSVDGFQGREKEAVVVSLVRSNQDH 655
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLK 1331
LG+ R+NVA+TR ++ L + G T+S P LK
Sbjct: 656 E---VGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLK 694
>gi|327304821|ref|XP_003237102.1| DNA helicase [Trichophyton rubrum CBS 118892]
gi|326460100|gb|EGD85553.1| DNA helicase [Trichophyton rubrum CBS 118892]
Length = 717
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 264/582 (45%), Gaps = 115/582 (19%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL-HEVWRIDKDEIMTSFSVMRYNLVQL 902
G++T + + +F R G+ D L ++W + +T + M + +L
Sbjct: 135 GVVTRVGERSIWAAFGD--RGKGKQDEDGVDELWGRKLWLVKLANDVT-YRRMNQTMAKL 191
Query: 903 -FLQSAQSSQLRRMIVDLEAP---RFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVL 957
LQ ++ SQL R++ P F+S G + DP SLND Q+ AI L
Sbjct: 192 EKLQESEHSQLIRVLFGHTTPLPLDFESVGPLEFMDP---------SLNDSQKEAIRFAL 242
Query: 958 TAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR 1017
+++ ALI G PGTGKT T++ ++ L+ R +L+ +N +VDN++ +L S + VR
Sbjct: 243 ASREIALIHGPPGTGKTHTLIELIRQLVQRKKRVLVCGPSNISVDNIVERLASHKVPLVR 302
Query: 1018 IGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---------------------- 1050
+G + + H L ++ S V++++K +D
Sbjct: 303 VGHPARLLSSVLDHSLEVLSQTSEAAAIVKDVRKEIDSKQASIRKTRNGRERRAIYGDLK 362
Query: 1051 --------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+VV T G L ++KFDV ++DEA Q P
Sbjct: 363 ELRKEFRERESKCVDNIVSGSQVVLGTLHGAGGHQLKNQKFDVVLIDEASQAREAQCWIP 422
Query: 1091 LMFASKFVLVGDHYQLPPLVQST-------------EAREN-------------GMEISL 1124
L+ AS+ VL GDH QLPP ++S + +E+ +EI+L
Sbjct: 423 LLPASRVVLAGDHLQLPPTIKSKSSSNLYQINSALWDKKEDLHFNELSNTFDMRNLEITL 482
Query: 1125 FRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
F RL H I L +QYRM Q IM+ + +Y +L IA ++ L
Sbjct: 483 FDRLLSLHGTGIKRMLTTQYRMHQKIMDFPSDELYESKL------IAADAVRERLLKDLH 536
Query: 1184 PWLKEALNPCRPVIFVNT---DML---PAYEAKDHQTL-----NNPVEACLIAKITQELV 1232
+++ + P++F +T D L P ++L N +EA ++A+ + LV
Sbjct: 537 YEVEDTDDTREPLVFYDTQGGDFLEKSPDSNGISAKSLLVESKCNDMEAAVVARHVENLV 596
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
+ +DI +ITPYN+Q L+ L ++E+ ++D +QGR+K+ ++VS VRS+++
Sbjct: 597 SAGVRPEDIAVITPYNAQVALLSQLLKEKFPTLELGSVDGFQGREKEAVVVSLVRSNQDH 656
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK-VPLLK 1331
LG+ R+NVA+TR ++ L + G T+S P LK
Sbjct: 657 E---VGFLGEKRRLNVAMTRPRRHLCICGDSETVSSGSPFLK 695
>gi|423251575|ref|ZP_17232588.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|423254898|ref|ZP_17235828.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
gi|392649760|gb|EIY43433.1| hypothetical protein HMPREF1066_03598 [Bacteroides fragilis
CL03T00C08]
gi|392653464|gb|EIY47120.1| hypothetical protein HMPREF1067_02472 [Bacteroides fragilis
CL03T12C07]
Length = 634
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAAHSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|374384247|ref|ZP_09641773.1| putative DNA helicase [Odoribacter laneus YIT 12061]
gi|373228854|gb|EHP51157.1| putative DNA helicase [Odoribacter laneus YIT 12061]
Length = 645
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 219/473 (46%), Gaps = 89/473 (18%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P L + W LND Q +A+ VL A+D A++ G PGTGKT+T+V A+ L + +L+
Sbjct: 183 PLLRFPW----LNDQQEKAVNHVLRAQDIAIVHGPPGTGKTTTLVEAIYETLHKENQVLV 238
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGR--------------------------------- 1020
+ +N AVD + KL + I +RIG
Sbjct: 239 CAQSNMAVDWISEKLVDRGIHVLRIGNPTRVNDKMLSFTYERRFEAHPDYPELWNIRKTI 298
Query: 1021 ------------HEVVHKEIQ--KHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLL 1066
E V+ +Q +H + + I +E+ + +V+A T +G N +L
Sbjct: 299 RELSPKLRKRETREAVYSRLQHLRHRATELEIKIEQEL---FGEARVIASTLVGSANKIL 355
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
K+F +DEA Q + + +L GDH QLPP +++ EA + G+ +L +
Sbjct: 356 EGKRFSTLFIDEAAQALEAACWIAIRKTDRVILAGDHCQLPPTIKNKEAAQQGLARTLMQ 415
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
++++ P A+S LQ QYRM + IM + Y + L A +++ ++
Sbjct: 416 KVAQRQPPAVSLLQIQYRMHEDIMHFPSRWFYHNCLQ------AAPEVRFRNI------- 462
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK----- 1239
L P+++ +T + E ++L+ N EA L+ + QE ++ E +
Sbjct: 463 ---LEYDSPIVWCDTQAYDSSEETAGESLSHLNRTEALLLLQQLQEYIQKIGETRILDEQ 519
Query: 1240 -DIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENP 1290
D G+I+PY +Q IR + + + I+T+D +QG+++D I +S VR++E
Sbjct: 520 IDFGLISPYKAQVRYIRQLMRKNPFFKPFSRLISINTVDGFQGQERDVIFISLVRANE-- 577
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
L D R+NVA+TRA+ KLI++G TL P K L + E+ I
Sbjct: 578 -AGNIGFLQDLRRMNVAITRARMKLILLGDALTLLHHPFYKALFEYIQEKGVI 629
>gi|400602498|gb|EJP70100.1| DNA helicase [Beauveria bassiana ARSEF 2860]
Length = 691
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 158/597 (26%), Positives = 261/597 (43%), Gaps = 116/597 (19%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR+GD V+++ + A A G++T++ + V + + D
Sbjct: 87 LRTGDIVLVADQPAGSAKKKEIQELEKKGARGVVTKVQKTSVFAAL---------DEGKD 137
Query: 873 ADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQ---SAQSSQLRRMIVDLEAPRFDSGSV 929
+ +VW + ++ + R NLV LQ A+ S R++ L +P
Sbjct: 138 EVAFGGKVWMV---KLADEVTYRRMNLVMEKLQKMSEAEYSGFIRVLFGLSSPS-PVPKD 193
Query: 930 FSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
S D LS I W + +LND Q+ AI L +++ ALI G PGTGKT T++ + L+
Sbjct: 194 LSADEELSKIEWFDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLIKLN 253
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
+L+ +N +VDN++ +L + +R+G + + H L A+ S V++
Sbjct: 254 KRVLVCGPSNISVDNIVERLSPHKVPILRLGHPARLLPSVVNHSLDALTQTSEAGAIVKD 313
Query: 1044 IKKRLD----------------QV--------------------------KVVAVTCLGI 1061
++ +D Q+ KVV T G
Sbjct: 314 VRAEMDAKQASIKKTKSGKERRQIYGDLRELRKEYRERERKCVSHLVGGSKVVLATLHGA 373
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS--------- 1112
L +KFDV I+DEA Q PL+ A+K V GDH QLPP ++S
Sbjct: 374 GGHQLRAEKFDVVIIDEASQALEAQCWVPLLSANKAVCAGDHLQLPPTIKSSNSAVSLKL 433
Query: 1113 ---TEARE---NGMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
TEA+ +E +LF RL H P L +QYRM + IM + +Y +L
Sbjct: 434 KDGTEAKPIKGQTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYESKL--- 490
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP------- 1218
+A + L + +++ + P+IF++T E + +NP
Sbjct: 491 ---VAAGAVNARLLKELAYEVEDNEDTNEPLIFIDTQGGDFPERSEEDDADNPKKGKVSL 547
Query: 1219 --------VEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTID 1269
+EA L+ + LV+ + +DI ++TPYN+Q A L +E+ ++D
Sbjct: 548 HGDSKSNEMEAALVQQHVSRLVEAGLRAEDIAVVTPYNAQLAVLAPLKEKFPGIELGSVD 607
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QGR+K+ I+VS VRS+ LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 608 GFQGREKEAIIVSLVRSNS---KGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKR 661
>gi|423270406|ref|ZP_17249377.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|423275362|ref|ZP_17254307.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
gi|392698330|gb|EIY91512.1| hypothetical protein HMPREF1079_02459 [Bacteroides fragilis
CL05T00C42]
gi|392702843|gb|EIY95988.1| hypothetical protein HMPREF1080_02960 [Bacteroides fragilis
CL05T12C13]
Length = 634
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|359405877|ref|ZP_09198604.1| putative DNA helicase [Prevotella stercorea DSM 18206]
gi|357557227|gb|EHJ38779.1| putative DNA helicase [Prevotella stercorea DSM 18206]
Length = 622
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/470 (27%), Positives = 218/470 (46%), Gaps = 92/470 (19%)
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
A+S W LN Q++A+ +VL AKD A++ G PGTGKT+T+V A+ L R + +L+
Sbjct: 180 AMSLPW----LNASQQQAVNEVLRAKDVAVVHGPPGTGKTTTLVEAIYETLRRESQVLVC 235
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIG----------------------------------- 1019
+ +N AVD + KL + ++ +RIG
Sbjct: 236 AQSNMAVDWIAEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEAHPDYPQLWSIRKAIR 295
Query: 1020 -------RHEVVHKEIQKHCLSAMNINSVEEIKKR---LDQVKVVAVTCLGITNPLLTDK 1069
R + H+++ + A I E++ R + +V+A T G N +L +
Sbjct: 296 ELRGERRRSDAWHQKMDRLKSRATEI----ELRIRASLFGEARVIACTLTGAANRVLEGE 351
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF +DEA Q + A + + GDH QLPP V+S A + G+ I+L R+
Sbjct: 352 KFSTLFIDEAAQALEAACWIAIRRAGRVIFAGDHCQLPPTVKSIMALKGGLGITLMERIV 411
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL--K 1187
+ P ++ L+ QYRM + IM S+ YG + +P + +
Sbjct: 412 KAKPDVVTLLKVQYRMNEQIMRFSSDWFYGGEV------------------QTAPGIERR 453
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNEI--EGK 1239
L+ RP+++V+T E + N EA L + Q+ K I E
Sbjct: 454 SILDYDRPMMWVDTSEAEGKEEFVGENFGRINRTEAELTLQTLQQYFEKIGKQRILDEHI 513
Query: 1240 DIGIITPYNSQANLIRHSLSVS--------SVEIHTIDKYQGRDKDCILVSFVRSSENPR 1291
D+GII+PY +Q L+ + S ++ ++T+D +QG+++D I++S VR+++
Sbjct: 514 DVGIISPYRAQVQLLHKMIRQSEFFRPYRRAISVNTVDGFQGQERDIIVISLVRNNDGK- 572
Query: 1292 NCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
L D R+NVA+TRA+ KLI++GS T++ P K L + Q+
Sbjct: 573 --EIGFLRDLRRMNVAITRARMKLIILGSAATMTAHPFYKKLYEWISGQA 620
>gi|336410631|ref|ZP_08591107.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
gi|335944206|gb|EGN06030.1| hypothetical protein HMPREF1018_03124 [Bacteroides sp. 2_1_56FAA]
Length = 634
Score = 173 bits (438), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|423285449|ref|ZP_17264331.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW 615]
gi|404578964|gb|EKA83682.1| hypothetical protein HMPREF1204_03869 [Bacteroides fragilis HMW 615]
Length = 634
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPSYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|53715040|ref|YP_101032.1| helicase [Bacteroides fragilis YCH46]
gi|52217905|dbj|BAD50498.1| putative helicase [Bacteroides fragilis YCH46]
Length = 634
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFIGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|60683002|ref|YP_213146.1| DNA-binding protein [Bacteroides fragilis NCTC 9343]
gi|60494436|emb|CAH09232.1| putative DNA-binding protein [Bacteroides fragilis NCTC 9343]
Length = 634
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|383116067|ref|ZP_09936820.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
gi|251945242|gb|EES85680.1| hypothetical protein BSHG_3112 [Bacteroides sp. 3_2_5]
Length = 634
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFIGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCSFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|375359786|ref|YP_005112558.1| putative DNA-binding protein [Bacteroides fragilis 638R]
gi|301164467|emb|CBW24025.1| putative DNA-binding protein [Bacteroides fragilis 638R]
Length = 634
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 212/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT ++F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGRRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFIGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|417780507|ref|ZP_12428268.1| AAA domain protein [Leptospira weilii str. 2006001853]
gi|410779216|gb|EKR63833.1| AAA domain protein [Leptospira weilii str. 2006001853]
Length = 637
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 218/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+ QR+A IK + ++D +I G PGTGKT+T+ + L+ G IL+++ T+SA D
Sbjct: 188 NLNESQRKAAIKAVLSEDVTIIHGPPGTGKTTTLTEIISQLVAEGKRILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESVSTRGIPVLRLGHPARISDAALHATLDYKLFHHPDGKLLSEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ VV T + +L ++
Sbjct: 308 KRNFGEKEKEERKNLFQEVKELKKTIRSMEKGLIDSLVSSHPVVVSTPVASARSVLEGRR 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P P++ + + +L GDH QLPP S + +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPP---SLFSEKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL+ G E ++S+ P+
Sbjct: 425 RLETSGRVFLLDTQYRMKDEISSFPSMEFYSNRLNSGRPEPE----RISNFPETFPF-GN 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L++N ++I +++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLLENNWSEEEITVLSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLISEKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L LI V ++
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFVEDK 625
>gi|431799922|ref|YP_007226826.1| type III restriction enzyme, res subunit [Echinicola vietnamensis DSM
17526]
gi|430790687|gb|AGA80816.1| Type III restriction enzyme, res subunit [Echinicola vietnamensis DSM
17526]
Length = 643
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 149/523 (28%), Positives = 233/523 (44%), Gaps = 104/523 (19%)
Query: 890 TSFSVMRYNLVQLFLQSAQS--SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLND 947
S+ M Y VQ +++ + QLR +++ E F G S + LN
Sbjct: 135 ASYREMEYA-VQQVIKAGEGRLGQLRNVLLGQEKASFVRGLPKSVEAP--------HLNH 185
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIK 1007
Q A+ VL A++ AL+ G PGTGKT+TMV A++ L +L+ + +N+AVD L+ K
Sbjct: 186 SQVEAVEMVLAAQEVALVHGPPGTGKTTTMVQAIEETLRSHRQVLVCAPSNAAVDLLVEK 245
Query: 1008 LKSQSIDFVRIGRHEVVHKEIQKHCLSA-----------------------------MNI 1038
L + + +RIG V E+ + L A N
Sbjct: 246 LLAIGLSTLRIGHPARVDDELLEQTLDAKIAQHSSFRDLKKLRKAAEEYRKLGRKYKRNF 305
Query: 1039 NSVEEIKKR------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ E +++ Q +V+A T +G +P+L F V
Sbjct: 306 GAAERQQRKQLFAEASKVKEAARHLEDYILYDVFQQNQVIATTLVGANHPVLKGMAFPVV 365
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ 1134
+DEA Q P + P++ A K V+ GDH QLPP ++S EA ++G+ +LF ++ + P+
Sbjct: 366 FIDEAAQGLEPATWIPVLKAQKIVMAGDHCQLPPTIKSYEAAKDGLSETLFEKVIQRQPE 425
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSC---------GSDEIANAKIKVSDLSSCSPW 1185
A L+ QYRM + IM S+ Y +L G DE A I +
Sbjct: 426 ASRMLRVQYRMPELIMRFSSEYFYHGQLEAAALTDEHFLGHDERVMAYIDTAGSGFGEHL 485
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
K++L+ +NTD EA+ + L+ KI K + IG+I+
Sbjct: 486 EKDSLSK------LNTD-----EAR----FGLGMLEKLVEKIGVSTFKE--KAFTIGVIS 528
Query: 1246 PYNSQANLIRHSLSVSS-----------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
PY +Q + + S V I TID +QG+++D +L+S VRS++
Sbjct: 529 PYKAQVKKLAELMEEGSEYENLRQLSDHVTIGTIDGFQGQERDVVLISMVRSND---EGE 585
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
L D R+NVALTRAK+KL++VG TLS P + ++ V
Sbjct: 586 IGFLADTRRMNVALTRAKRKLMVVGDSGTLSTHPFYQKFLDFV 628
>gi|343085505|ref|YP_004774800.1| ATPase AAA [Cyclobacterium marinum DSM 745]
gi|342354039|gb|AEL26569.1| AAA ATPase [Cyclobacterium marinum DSM 745]
Length = 641
Score = 172 bits (437), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 132/453 (29%), Positives = 212/453 (46%), Gaps = 92/453 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ + AKD A++ G PGTGKT+T++ A+ + +L+ + +N+AVD L
Sbjct: 183 LNAGQNKALELIEQAKDLAIVHGPPGTGKTTTLIQAIVSATQIYDQVLVCAPSNAAVDLL 242
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM---------------------------- 1036
+ ++ ++++ +RIG + +I + L A
Sbjct: 243 VERMGDENLEVLRIGHPARIDDKIIQRTLDAKILAHPSYKAYKKLRKEAEEYRRKANKFK 302
Query: 1037 -NINSVEEIKKR------------------------LDQVKVVAVTCLGITNPLLTDKKF 1071
N E K++ LD +V+A T +G + LL K F
Sbjct: 303 RNFGHAEREKRKMHYNEAGKCQAEARQLYDYMTHSILDSCQVIACTLVGAASNLLKGKTF 362
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
V +DEA Q P + P+M A K V GDH QLPP ++S EA + G++ +LF +
Sbjct: 363 QVVFLDEAAQGLEPATWIPIMKAQKVVFAGDHCQLPPTIKSREAAK-GLQNTLFEKAITN 421
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
P+A L QYRM + IM SN Y ++L IA A + L+ L
Sbjct: 422 QPEAAQILSVQYRMAEAIMGFSNIAFYNNKL------IAAANTQKHYLAEGEATLA---- 471
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTL--NNPVEACL----IAKITQELVKNEIEGK--DIGI 1243
F++T E KD +TL +N EA + + + + + KN E + +G+
Sbjct: 472 ------FIDTAGSGFLEFKDRETLSISNKEEAFMLLTLLKDLLKRIGKNNSENQAWQVGL 525
Query: 1244 ITPYNSQANLIRHSLSVSS-----------VEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
I PY++Q L++ +++ S + I T+D +QG+++D IL+S RS+E
Sbjct: 526 IAPYSAQVRLLKEMVAMDSEWIFLKQLDQNLTISTVDGFQGQERDIILISLTRSNEQGE- 584
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
L D R+NVALTRAK+KLI++G T+
Sbjct: 585 --IGFLADTRRMNVALTRAKRKLIVLGDSATIG 615
>gi|432328902|ref|YP_007247046.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
gi|432135611|gb|AGB04880.1| DNA helicase, putative [Aciduliprofundum sp. MAR08-339]
Length = 650
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 169/301 (56%), Gaps = 14/301 (4%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
LD V+ T +L D KFD ++DEA Q P L P++ ++ ++ GDH QLP
Sbjct: 354 LDNADVICTTNSTAGGEMLRDLKFDFVVIDEATQAVEPSCLIPMLKGTRILMAGDHKQLP 413
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL----S 1163
P V S +A+ ++++LF RL + +PQA L+ QYRM + IME + + Y L +
Sbjct: 414 PTVMSYDAK--ALQLTLFERLIKIYPQASITLRIQYRMNEKIMEFPSNMFYRGLLEAHRT 471
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACL 1223
IA+ I S +S +++ NP +IFV+ + + + + NP EA
Sbjct: 472 VKDRTIADVGIDPSRISE----MRDICNPEEVIIFVDLET-EEEQRRGSTSYQNPGEARC 526
Query: 1224 IAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSF 1283
+ +I L+K ++ K IGIITPY+ Q +L++ + +EI ++D +QGR+K+ I++SF
Sbjct: 527 VTRIVNCLLKIGLKEKHIGIITPYDDQVDLLKSIIPNEDLEIKSVDGFQGREKEVIVISF 586
Query: 1284 VRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
VR+++ L D R+NVA+TRAK+KLI+VG+ +TL P+ LI+ + + +
Sbjct: 587 VRAND---RGELGFLTDLRRLNVAITRAKRKLIIVGNSKTLRAHPVYDSLIDYIEHRGKV 643
Query: 1344 L 1344
L
Sbjct: 644 L 644
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ QRRA+ + + ++ + LI G PGTGKT+T+ + ++ RG +L T+ +N AVDNL
Sbjct: 172 LNEFQRRAVRRSIGSELF-LIHGPPGTGKTTTLAEGIVQMVRRGFKVLATADSNVAVDNL 230
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE-----EIKKRLDQVK 1052
+ KL + ++ VRIG + K I +H L + +E E+ +R+D ++
Sbjct: 231 VEKL-AHKVNVVRIGHPARISKSIIEHTLDYIVSRDIEYRKAMELWERIDGMR 282
>gi|452820756|gb|EME27794.1| endonuclease [Galdieria sulphuraria]
Length = 712
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 210/449 (46%), Gaps = 82/449 (18%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSA 1000
E N+ Q+ A L + LI G PGTGKT T+ + +L+ G + IL ++YT+ A
Sbjct: 262 ENDWNESQQTAWKNAL-ERRLTLIQGPPGTGKTKTLAKILASLVQLGRTPILASAYTHIA 320
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKR------------- 1047
DN+L +L+ +I +RIG+ +H+ + K+ L ++ I+KR
Sbjct: 321 TDNILDELERYNIPAIRIGKPANIHRNLWKYSLDSLLERDTRIIEKRENLKKAMERLAQP 380
Query: 1048 -------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
LD+ +V TC+G +L + F V +
Sbjct: 381 KRGKAIGLAHRDYSKSLGQLKQTEMIATKEILDKYPIVLSTCVGAGEEILKNISFQVVAI 440
Query: 1077 DEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
DEA Q+ P L P++ + +L GDHYQLPP + + EA E+G+ +SLF RL +
Sbjct: 441 DEATQSHEPGLLIPIIKGCEQLILAGDHYQLPPTILNPEAAESGLSVSLFERLVRSGVEP 500
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
L++QYRM I + Y L +S+ PW NP P
Sbjct: 501 Y-LLRTQYRMHPSIAAFPSQYFYHGLLHSAPC--------TQSISNYFPW----PNPQTP 547
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD-----------IGII 1244
+ F+ + + + + NP E+ ++ + ++V+N + ++ IGII
Sbjct: 548 IAFIPV-LGEEWVTEQGTSYCNPQESQVVIETISQIVENWMTAQNSNHTLQQSFPTIGII 606
Query: 1245 TPYNSQANLIRHSLS-------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
TPY Q I + +S VE+ T+D +QGR+KD I++S VRS NP +
Sbjct: 607 TPYAGQMRDIMDRMDRETSTEWLSYVEVKTVDGFQGREKDIIIISTVRS--NPSQ-SLGF 663
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L DW R+NVA+TR++ LI++G+ TLS+
Sbjct: 664 LQDWRRLNVAITRSRSGLIVIGNANTLSR 692
>gi|393785219|ref|ZP_10373372.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
gi|392662922|gb|EIY56477.1| hypothetical protein HMPREF1071_04240 [Bacteroides salyersiae
CL02T12C01]
Length = 634
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 216/456 (47%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEEAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVH----------------------------KEIQKHCLSAM 1036
KL + + +RIG V+ +EI H
Sbjct: 252 AEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFENHPAYTELWSVRKSIREISGHIRKG- 310
Query: 1037 NINSVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMD 1077
N + E ++ R+ +++ V+A T + + +L ++F +D
Sbjct: 311 NYSERESMRNRISRLRDRATELEILINEDLFSSARVIASTLVSSNHRILEGRRFSTLFID 370
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + A + + GDH QLPP ++ EA G++ +L ++ P ++S
Sbjct: 371 EAAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARGGLDQTLMEKVVTNKPVSVS 430
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM + IM + Y ++L + E+ + I L+ P++
Sbjct: 431 LLKVQYRMNEAIMRFPSEWFYNNQLE-SAPEVRHRGI---------------LDYDTPMV 474
Query: 1198 FVNTDMLPAYE---AKDHQTLNNPVEACLIAKI---TQELVKNEI--EGKDIGIITPYNS 1249
+++T L +E + +N P LI ++ Q + +N + E D G+I+PY +
Sbjct: 475 WIDTSELEFHEEFVGESFGRINKPEADLLIQELKNYIQRIGENRVFDERIDFGLISPYKA 534
Query: 1250 QANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R+ + SS + I+T+D +QG+++D I +S VR++EN + L D
Sbjct: 535 QVQYLRNKIKSSSFFRPFRELITINTVDGFQGQERDVIFISLVRANENGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G +TL++ K L+ V
Sbjct: 592 RRMNVAITRARMKLVILGEAQTLTRHAFYKKLMEYV 627
>gi|118368904|ref|XP_001017658.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila]
gi|89299425|gb|EAR97413.1| hypothetical protein TTHERM_00339940 [Tetrahymena thermophila SB210]
Length = 676
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/458 (29%), Positives = 222/458 (48%), Gaps = 85/458 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ +K LN++Q+ AI L+++ LI G PGTGKT T+ + + G +L + +N
Sbjct: 231 FYKKDLNEEQKDAINFCLSSQTIGLIHGPPGTGKTMTVCELIYQAVKMGLRVLACAGSNI 290
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS---------------AMNIN----- 1039
AVDN++ +L + +RIG + I + CL NIN
Sbjct: 291 AVDNMVERLAKTDLKVMRIGHPARMLPTIYEQCLDNKLRKTTCFKELKALKQNINKQLQK 350
Query: 1040 --------SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDK--- 1069
+EIKK L +++ VV T G + +
Sbjct: 351 LQKDISYGEKKEIKKLLTELRKEMREQEQLSIKEVIQDTQVVCCTNSGAADYIFKRDFGK 410
Query: 1070 -KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR- 1127
+FD+ ++DE Q P++ + VL GDH QLPP ++S + G+ ++LF R
Sbjct: 411 VEFDLVVIDECAQALELSCWIPILLGKRVVLAGDHKQLPPTIKS---KNQGLSVTLFDRV 467
Query: 1128 LSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVSDLSSC 1182
L E P+ +S L+ QYRM Q IME S+ +YG +L S + I I + + +
Sbjct: 468 LKEFQPENVSRLLKVQYRMNQQIMEWSSQYVYGGQLKAHESVATHSIGGESILLF-IDTA 526
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
+ E +N A D +++ +N EA L+ I +EL ++ K++
Sbjct: 527 GAKMGETINE---------------NANDKNKSKSNLGEADLVKIIFEELKLQGLQEKEV 571
Query: 1242 GIITPYNSQANLIR-----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
G+ITPYN+Q +LI+ ++++ VE+ T+D +QGR+K+CI++S VRS NP N
Sbjct: 572 GVITPYNAQVDLIKKLFENNNINTQQVEVSTVDGFQGREKECIIISMVRS--NPLN-QVG 628
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
L D+ R+NVA+TRA+K + ++G T+S L ++
Sbjct: 629 FLSDYRRMNVAVTRARKFVCLIGDSETVSSDKFLDEMV 666
>gi|373958634|ref|ZP_09618594.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
gi|373895234|gb|EHQ31131.1| ATPase AAA [Mucilaginibacter paludis DSM 18603]
Length = 636
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 234/504 (46%), Gaps = 97/504 (19%)
Query: 905 QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYAL 964
+ A +L +++ E P F + + P L+ LN Q+ A+ K+++A+D A+
Sbjct: 148 EKAGEGRLVKVLTGAEQPTFSAPLLL---PKLT------GLNPSQQAAVEKIVSAQDLAI 198
Query: 965 ILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEV 1023
+ G PGTGKT+T+V A+K+L+ +G +L+ + +N+AVD L KL + ++ +RIG
Sbjct: 199 VHGPPGTGKTTTLVQAIKSLISQGEKQLLVVAPSNTAVDLLSEKLAGEGLNVLRIGNPAR 258
Query: 1024 VH------------------KEIQKHCLSAMNINSVEEIKKR------------------ 1047
V K+I+K A ++ KR
Sbjct: 259 VSDRLMSLTLDSKMAEHGRMKDIKKLKKQAAEFKNMAHKYKRSFGKAERDQRKALFDEAH 318
Query: 1048 -----------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ + +V+ T +G + + +F+ ++DEAGQ P P
Sbjct: 319 KIMKDVGKTEQYIIDDLVGRAQVITATLVGSNHYTIRGLQFNTVVIDEAGQALEPACWIP 378
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
++ A K +L GDH+QL P ++S +A +G+ +L + HP+A+ L+ QYRM + IM
Sbjct: 379 ILKAQKVILAGDHFQLSPTIKSAKAAHDGLSNTLLEKCITLHPEAVVLLEEQYRMNEAIM 438
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
S+ + Y ++L A+A + L + P +V+T E
Sbjct: 439 TYSSQVFYQNKLQ------AHASVAQRLLFTADA----------PFSYVDTAGCGFDEKP 482
Query: 1211 DHQTLNNPVEACLIAKITQELVK--NEIEGKD----IGIITPYNSQANLIRH-------- 1256
+ ++ N EA + K ++LV NE + I I++PY Q L++
Sbjct: 483 EGTSMANAEEAGFLFKHLEKLVTELNEHYTTENFPTIAIVSPYKEQIRLLKDQQQHWPGL 542
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
L + ++TID +QG+++D + +S RS+ L D R+NVA+TRA+KKLI
Sbjct: 543 QLYQDKISVNTIDSFQGQERDIVYISMTRSNTKGE---IGFLSDIRRMNVAMTRARKKLI 599
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQ 1340
++G TL++ P +I K EQ
Sbjct: 600 IIGDSSTLAQAPFYADMI-KYAEQ 622
>gi|319903097|ref|YP_004162825.1| helicase [Bacteroides helcogenes P 36-108]
gi|319418128|gb|ADV45239.1| putative helicase [Bacteroides helcogenes P 36-108]
Length = 651
Score = 172 bits (435), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 147/564 (26%), Positives = 262/564 (46%), Gaps = 89/564 (15%)
Query: 842 ASGLITEISRFHVSVSFSKPLRL----PGRNSSSD---ADSLLHEVWRIDKDEIMTSFSV 894
A G IT ++ F +VS++ R+ PG + + AD+L +++ D+ T F
Sbjct: 95 ADGKITYMN-FTATVSYADEGRMVVVMPGTGAVMEVQAADNLGVQLY-FDETSYRTMFEA 152
Query: 895 MRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAII 954
+ L + + ++LR ++D S + F + + + W LN Q A+
Sbjct: 153 LEDTLRA---KGNRLAELRDTLLD------TSKAKFRELYPVRFPW----LNATQESAVN 199
Query: 955 KVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSID 1014
KVL +D A++ G PGTGKT+T+V A+ L R +++ + +N+AVD + KL + ++
Sbjct: 200 KVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHREPQVMVCAQSNTAVDWISEKLVDRGVN 259
Query: 1015 FVRIGRHEVVH---------KEIQKHCLSAM------------------NINSVEEIKKR 1047
+RIG V+ + + H L + + E ++ R
Sbjct: 260 VLRIGNPTRVNDKMLSFTYERRFESHSLYTELWSIRQELRQLQGKTRRGSYDEREGVRSR 319
Query: 1048 L-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
+ D V+A T +G + LL+ +F +DEA Q
Sbjct: 320 ISRLRDRATALELQINAELFDSAHVIASTLVGSNHRLLSGHRFGTLFIDEAAQALEAACW 379
Query: 1089 GPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
+ A + +L GDH QLPP V+ EA G+E +L ++ P A+S L+ QYRM +
Sbjct: 380 IAIRKADRVILAGDHCQLPPTVKCPEAARGGLERTLMETVAAAKPTAVSLLKMQYRMHED 439
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA-LNPCRPVIFVNTDMLPAY 1207
IM S+ Y L + E+ + I D C W+ + +N + +
Sbjct: 440 IMRFSSEWFYNGELKA-APEVRHRGILDWDTPIC--WIDTSEMNFKEEFVGETFGRINKE 496
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS----- 1262
EA L +EA ++ + +++ +I D G+I+PY +Q +R+ + S+
Sbjct: 497 EA---NLLLQELEAYILRIGGKRILEEQI---DFGLISPYKAQVQHLRNKIKTSAALRPY 550
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+ ++T+D +QG+++D I +S VR++E+ + L D R+NVA+TRA+ KL+++G
Sbjct: 551 RSLLTVNTVDGFQGQERDVIFISLVRANEDGQ---IGFLHDLRRMNVAITRARMKLVILG 607
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGI 1343
TL++ K L+ + EQ G+
Sbjct: 608 EADTLNRHAFYKKLMEYIKEQGGV 631
>gi|302345999|ref|YP_003814352.1| hypothetical protein HMPREF0659_A6297 [Prevotella melaninogenica ATCC
25845]
gi|302149083|gb|ADK95345.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845]
Length = 656
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 220/461 (47%), Gaps = 79/461 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +VL AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 196 LNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 255
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH-----------CLSAMNIN---SV 1041
KL + I+ +RIG V+ ++ + H + + N S
Sbjct: 256 CEKLVDRGINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNNRKKSS 315
Query: 1042 EEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
E +++D++K VVA T +G + ++ +KF +DEA Q
Sbjct: 316 ESYHQKMDRLKSRATELEIRINAELFGEARVVASTLVGANSRIMEGQKFTTLFIDEAAQA 375
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+ AS+ + GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 376 LEAACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVENKPEVVTLLKVQ 435
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--------------------SDE--IANAKIKVSDLS 1180
YRM + IM S+ YG ++ SDE +A+ + S+ +
Sbjct: 436 YRMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVASYDLTESEAN 495
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
S L FV + + + TL V+ KI ++ V N E D
Sbjct: 496 SAPSQLNNDRGNAFHEQFVGSSFGRINKGEAELTLKTLVD--YFTKIGKQRVLN--ERID 551
Query: 1241 IGIITPYNSQANLIRHSLSV--------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+G+I+PY +Q +R + S + ++T+D +QG+++D IL+S VRS+++ +
Sbjct: 552 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQ- 610
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
L D R+NVA+TRA+ KLI++G+ +T++K K L
Sbjct: 611 --IGFLRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKL 649
>gi|359689939|ref|ZP_09259940.1| DNA and RNA helicase [Leptospira licerasiae serovar Varillal str.
MMD0835]
gi|418748881|ref|ZP_13305173.1| AAA domain protein [Leptospira licerasiae str. MMD4847]
gi|418757762|ref|ZP_13313949.1| hypothetical protein LEP1GSC185_3128 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384115539|gb|EIE01797.1| hypothetical protein LEP1GSC185_3128 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404275950|gb|EJZ43264.1| AAA domain protein [Leptospira licerasiae str. MMD4847]
Length = 627
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 213/458 (46%), Gaps = 81/458 (17%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
++LND Q++A+ +L +D+ L+ G PGTGKT T+V A++ L G IL ++ TNSA D
Sbjct: 174 ETLNDSQKKAVSAILQTEDFVLVHGPPGTGKTKTIVEAIRILASEGKRILASAPTNSASD 233
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN-------------SVEEIKKRLD 1049
L+ L+ + +RIG ++ +I ++ L M +N V+E+ K+
Sbjct: 234 LLVESLEKLKVPVLRIGHPARMNPDILQNSLE-MKLNHSPESKLIERDRKEVQELLKKAR 292
Query: 1050 QVK-----------------------------------------VVAVTCLGITNPLLTD 1068
+ K V+ T G ++ LL +
Sbjct: 293 KYKRSFGKEEAEERRSLYKEADSLRKSIKERQKVLVRYLLESHPVIVCTHTGASSYLLHN 352
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
FD I+DE Q P S P++ A+KFV+ GD +QLPP V S + +++SL RL
Sbjct: 353 LDFDYAILDEGSQAIEPSSWIPILKANKFVIAGDPFQLPPTVISEDPL---LKVSLMERL 409
Query: 1129 --SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
+ + + + L +QYRM I N Y ++L G + +DL +P+
Sbjct: 410 LPAFQDKERVFLLDTQYRMTDPIQTFPNLKFYENKLKSGLE---------TDLREKTPF- 459
Query: 1187 KEALNPC-RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
++ P ++F+++ E +L NP EA I + ++ + + K + +++
Sbjct: 460 -DSGEPFGSSLVFLDSSGTDTAEENSEGSLGNPWEAEFTVNIVKRILDSGWDPKGLILLS 518
Query: 1246 PYNSQANLIRHSLS------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
PY Q L+R L S +E+ T+D +QGR+ D ++ S VRS+ L
Sbjct: 519 PYRYQRYLLRQKLEEILPEHSSQLEVETVDSFQGRESDAVVFSLVRSNS---EGQIGFLS 575
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+ R NV +TRAKK L+MVG TL + K L+ V
Sbjct: 576 ETRRWNVGMTRAKKLLVMVGDGSTLGQNDFFKDLLETV 613
>gi|356570496|ref|XP_003553421.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/465 (29%), Positives = 223/465 (47%), Gaps = 67/465 (14%)
Query: 936 LSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
+S+ K+L+ Q+ A+ K L++K+ L+ G PGTGKT+T+V + + RG+ IL +
Sbjct: 189 VSFTPFNKNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACA 248
Query: 996 YTNSAVDNLLIKLKSQSIDFVRIG------------------------------RHEVVH 1025
+N AVDN++ +L + VR+G R E+
Sbjct: 249 ASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEM-- 306
Query: 1026 KEIQKHCLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLL 1066
K + L + N+ ++I++ L D +K V+ T +G + L
Sbjct: 307 KALNGKLLKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKL 366
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
FD+ I+DEA Q PL+ S+ VL GDH QLPP +QS EA + G+ +LF
Sbjct: 367 DSTSFDLVIIDEAAQALEIACWIPLLKGSRCVLAGDHLQLPPTIQSVEAEKKGLGRTLFE 426
Query: 1127 RLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW 1185
RL+E + I S L QYRM + IM+ S+ +Y ++ A+ + DL
Sbjct: 427 RLAEVYGDEITSMLTVQYRMHELIMDWSSKELYNSKIKAHPSVTAHM---LYDLEG---- 479
Query: 1186 LKEALNPCRPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+K + ++ ++T E KD + + N EA + + LV++ + DIGII
Sbjct: 480 VKRTTSTEPTLLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVAHAKRLVQSGVIPSDIGII 539
Query: 1245 TPYNSQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
TPY +Q L++ + VEI T+D +QGR+K+ I++S VRS+ L D
Sbjct: 540 TPYAAQVVLLKMLKNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSD 596
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TR++++ +V T+S LK LI E L+
Sbjct: 597 HRRMNVAVTRSRRQCCLVSDTETVSGDGFLKRLIEYFEEHGEYLS 641
>gi|119173632|ref|XP_001239228.1| hypothetical protein CIMG_10250 [Coccidioides immitis RS]
Length = 779
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 151/268 (56%), Gaps = 5/268 (1%)
Query: 392 KVLRLLNEQSGEERAVHLWEDWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDV 451
KVL + E++ + RA+ L E WF G +++IGEFD G+C V NN +I+HPD
Sbjct: 516 KVLFVEEERTKQNRAITLRESWFDMPCKKGFYLHLIGEFDTTGQCIVDDANNMIILHPDY 575
Query: 452 LVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKEIPTMKFLEEY 510
L+S T VA SF+C RR+VL +R+K SE S + G +LH+IFQ + L
Sbjct: 576 LISATVVADSFTCQRRAVLQDRIKATSEASKPQVYGHILHEIFQEAMQANRWDFGCLRGL 635
Query: 511 ARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVDFGSDGLKK 570
L K +ESLY V+ + L IP + W +F + ++ ++ + +
Sbjct: 636 IDETLPKYLESLYEIQVDVPEAKAYLQAKIPALKAWAEVFLRCRPIHESIIEDRNGTKAR 695
Query: 571 LKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM 630
L I+++ ++EE W+P YGLKG +DA+++V ++ K E + +PLE KTG+ ++
Sbjct: 696 LCINKLLEVEEHIWSPMYGLKGNVDATVQVVLQDK-TEQKTLTVPLELKTGRNTTNET-- 752
Query: 631 EHRAQVILYTLLMSERYLKHIDSGLLYY 658
HRAQ LYTLL+S+RY + +LYY
Sbjct: 753 -HRAQTALYTLLLSDRYDIDVTLNILYY 779
>gi|302800219|ref|XP_002981867.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
gi|300150309|gb|EFJ16960.1| hypothetical protein SELMODRAFT_179218 [Selaginella moellendorffii]
Length = 643
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 218/444 (49%), Gaps = 63/444 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L++ Q +A+ L+A+D L+ G PGTGKT+ +V + + RG +L + +N AVDN+
Sbjct: 195 LDESQVKAVKMALSAQDVMLLHGPPGTGKTTAVVEIILQEVKRGLKVLACASSNIAVDNM 254
Query: 1005 LIKLKSQSIDFVRIGR---------------------HEVVHKEIQKHC-------LSAM 1036
+ +L + VR+G + + K+I+K L A
Sbjct: 255 VERLACHKVKVVRLGHPARLLPQVLDCALDAQVLKTDNSSLAKDIRKEISVLNAKILKAK 314
Query: 1037 NINSVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMD 1077
+ S +E+++ L Q+ VV T G + L FDV ++D
Sbjct: 315 DRKSRDELRRELRQLSKEERQRQQKAVTDVIQGASVVLTTLTGAMSAQLQKVDFDVVVLD 374
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP-QAI 1136
EA Q ++ + +L GDH QL P V S EA + G +LF RL+ + QA+
Sbjct: 375 EAAQALETACWIAILKGRRCLLAGDHLQLAPTVLSKEAEKQGFGTTLFERLAGLYASQAM 434
Query: 1137 SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV 1196
+ L QYRM + IM+ S+ +YG ++ + +A+ K+ D +P + L
Sbjct: 435 TMLTVQYRMHEHIMDWSSHELYGGKIQ-AHELVASRKLFELDGVKKTPATEHTL------ 487
Query: 1197 IFVNTDMLPAYEAKDH-QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
+ ++ E+KD ++ N EA + Q+LV++ ++ DIGI+TPY +Q N++R
Sbjct: 488 VLIDICGCDMEESKDETESSFNEGEARIAITHAQKLVESGVKAIDIGIVTPYAAQVNVLR 547
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
+ VEI TID +QGR+K+ +++S VRS++ L D R+NVA+TRA
Sbjct: 548 RMRNEEQRLLEVEISTIDGFQGREKEAMIISMVRSNDKKE---VGFLSDKRRMNVAVTRA 604
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLIN 1335
K++ ++ T+ K P LK L++
Sbjct: 605 KRQCCVICDSDTVGKDPFLKRLLD 628
>gi|423260347|ref|ZP_17241269.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|423266481|ref|ZP_17245483.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
gi|387775493|gb|EIK37600.1| hypothetical protein HMPREF1055_03546 [Bacteroides fragilis
CL07T00C01]
gi|392701058|gb|EIY94219.1| hypothetical protein HMPREF1056_03170 [Bacteroides fragilis
CL07T12C05]
Length = 634
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 211/456 (46%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEAAVNKVLCAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 252 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFEGHPAYTELWGIRKSIREMGNRMRKSS 311
Query: 1038 ----------INSVEEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
IN + E L+ +V+A T + + +LT +F +DE
Sbjct: 312 YSEREAARSRINHLRERATELEIQINEDLFSGARVIASTLVSSNHRILTGWRFTTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + + GDH QLPP ++ EA NG+E +L +++ + +S
Sbjct: 372 AAQALEAACWIAIRKADRVIFAGDHCQLPPTIKCIEAARNGLEQTLMEKVAANKQETVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM Q IM+ S+ Y L + E+ N I DL P+ +
Sbjct: 432 LKVQYRMHQSIMQFSSEWFYQGELQ-AAPEVTNRGILDLDL---------------PMSW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 476 IDTSEMEFHEEFVGESFGRINKP-EANLLLQELEAYIRKIGEKRVLEERIDFGLISPYKA 534
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R L S + IHT+D +QG+++D I +S VR++E+ + L D
Sbjct: 535 QVQYLRGKLKGCLFFRPFRSQITIHTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDL 591
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK K LI +
Sbjct: 592 RRMNVAITRARMKLVILGDAVTMSKHAFYKKLIGYI 627
>gi|310790786|gb|EFQ26319.1| hypothetical protein GLRG_01463 [Glomerella graminicola M1.001]
Length = 690
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 159/600 (26%), Positives = 263/600 (43%), Gaps = 120/600 (20%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR GD V++S + A A G++T + R + V+ + +
Sbjct: 85 LRPGDIVLVSEQPAGNAKKKEVKELESKGARGVVTRVRRETIGVAVD--------DGKGE 136
Query: 873 ADSLLHEVWRIDKDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVFS 931
VW + + +T F M + +L + ++ + R++ L +P S
Sbjct: 137 EREFAGRVWIVKVADDVT-FRRMNQTMEKLEKMTESEYTAFMRVLFGLSSP-----SPVP 190
Query: 932 QDPA----LSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
QD A LS I W + SLND Q+ AI L +++ ALI G PGTGKT T++ + L+
Sbjct: 191 QDLAADSELSKIQWIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLIK 250
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
IL+ +N +VDN++ +L I +R+G + + H L + S V
Sbjct: 251 LDLRILVCGPSNISVDNIVERLAPHKIPILRLGHPARLLPSVLAHSLDVLTQTSEAGAIV 310
Query: 1042 EEIKKRLD------------------------------------------QVKVVAVTCL 1059
++++ +D + KVV T
Sbjct: 311 KDVRAEMDAKQASIKKTRNGREKRQIYADLKELRKEFRERERRCVSNLIRESKVVLATLH 370
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR--- 1116
G L D++FD+ I+DEA Q PL+ A K V GDH QLPP ++S R
Sbjct: 371 GAGGHQLRDQRFDIVIIDEASQALEAQCWVPLLSAKKAVCAGDHLQLPPTIKSLNYRVKA 430
Query: 1117 ----ENG---------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRL 1162
E+G +E +LF RL H P L +QYRM + IM + +Y RL
Sbjct: 431 AAVSEDGAEKQIKSMTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYEGRL 490
Query: 1163 SCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTL---- 1215
IA ++ L +++ + P++F++T D E D +
Sbjct: 491 ------IAAEAVRGRLLKDLPYEVRDTEDTNEPLVFIDTQGGDYPEKNEDDDKDAIKKAK 544
Query: 1216 --------NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIH 1266
+N +EA L+ + Q+LV ++ +DI ++TPYN+Q A L + +E+
Sbjct: 545 FSLHGESKSNEMEAALVRQHAQKLVDAGVKPEDIAVVTPYNAQLAVLAPLKEQLPGIELG 604
Query: 1267 TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
++D +QGR+K+ ++VS VRS+ + LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 605 SVDGFQGREKEAVIVSLVRSNS---HGEVGFLGEQRRLNVAMTRPKRSLTVIGDSETVKR 661
>gi|449437623|ref|XP_004136591.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449501878|ref|XP_004161482.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 647
Score = 171 bits (433), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/444 (30%), Positives = 216/444 (48%), Gaps = 65/444 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L+ Q+ AI K L+ K+ L+ G PGTGKT+T+V + + RG+ IL + +N AVDN+
Sbjct: 197 LDHSQKDAISKALSGKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
Query: 1005 LIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCLS 1034
+ +L + VR+G R E+ K + L
Sbjct: 257 VERLVPHRVKLVRVGHPARLLPQVLESALDAQVLRGDNSSLANDIRKEM--KALNGKLLK 314
Query: 1035 AMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVCI 1075
A + N+ EI+K L D +K VV T G + L + FD+ I
Sbjct: 315 AKDRNTRREIQKELRTLSKEERNRQQLAVTDVIKNSDVVLTTLTGAFSRKLNNISFDLVI 374
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q L+ AS+ +L GDH QLPP +QS EA + G+ +LF RL+E +
Sbjct: 375 IDEAAQALEIACWIALLKASRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYGNE 434
Query: 1136 I-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR 1194
+ S L QYRM + IM+ S+ +Y ++ S A+ + D+ S + P
Sbjct: 435 VTSMLTVQYRMHELIMDWSSKELYDSKIKAHSSVAAHMLYDLEDVKKTS-----STEPTL 489
Query: 1195 PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI 1254
+I + + + ++ TLN EA + + L+++ ++ DIGIITPY +Q L+
Sbjct: 490 LLIDIAGCEMEERKDEEESTLNEG-EAEVAMAHAKRLIQSGVQPSDIGIITPYAAQVVLL 548
Query: 1255 RHSLS----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
+ S + +EI T+D +QGR+K+ I++S VRS+ L D R+NVA+TR
Sbjct: 549 KTLRSNDDKLKDIEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDRRRMNVAVTR 605
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLI 1334
A+++ +V T++ LK LI
Sbjct: 606 ARRQCCLVCDTDTVTYDAFLKRLI 629
>gi|412986744|emb|CCO15170.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 974
Score = 171 bits (432), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 198/403 (49%), Gaps = 37/403 (9%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVD 1002
+LN+ Q+RA+ L + +LI G PGTGKT T V V+ L+ G +L TS +N+AVD
Sbjct: 538 NLNESQQRAVSATLE-RRLSLIQGPPGTGKTHTSVAIVRGLIDIGRGPVLCTSDSNTAVD 596
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM------NINSVEEIKKRLDQVKVVAV 1056
NL+ L + VRIGR E V +++ + + M + E + + + V
Sbjct: 597 NLVEGLARAGVRVVRIGRTEAVRQDLAMYQIENMVPPGCTKHEAYEAQIRAVRYAQAVCC 656
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLPPLVQSTEA 1115
TC G + L F ++DEA Q T P+SL P+ + VLVGDH QLPP + S EA
Sbjct: 657 TCAGSGSDFLDRISFSAVMLDEASQVTEPMSLVPISRGCQQLVLVGDHKQLPPTILSREA 716
Query: 1116 RENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
G+ +S+F RL L +Q+RM + + + Y +L G+
Sbjct: 717 ELGGLTLSMFDRLVSLG-VVPYMLDTQFRMHPALGKFPSDAFYDKQLKNGTPRAMRP--- 772
Query: 1176 VSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI-AKITQELVKN 1234
+P P P+ ++ T A E D + +N EA L+ A + L
Sbjct: 773 -------TPIGFNWPQPNVPICYIPTHPTNAMENNDSNSYSNRAEAELVLAYLRGFLSAQ 825
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLSVS-------------SVEIHTIDKYQGRDKDCILV 1281
E+ KDIGI+TPY +Q L+R + + +E+ ++D +QGR+K+ ++V
Sbjct: 826 ELRPKDIGIVTPYAAQVRLLRQMIRRAGIQTGVDRNTGECGIEVSSVDGFQGREKELMIV 885
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
S VR++ N + + D R NV LTRA++ L+++G TL
Sbjct: 886 STVRANTNR---SLGFVSDPRRCNVTLTRARRGLVVIGHENTL 925
>gi|336274090|ref|XP_003351799.1| hypothetical protein SMAC_00344 [Sordaria macrospora k-hell]
gi|380096080|emb|CCC06127.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 712
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 221/475 (46%), Gaps = 90/475 (18%)
Query: 933 DPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
DP + I W + +LND Q+ AI L +++ ALI G PGTGKT T++ + LL R I
Sbjct: 217 DPEVGNIEWVDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRDLRI 276
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKK 1046
L+ +N +VDN++ +L + +R+G + + H L + S V++++
Sbjct: 277 LVCGPSNISVDNIVERLSPHKLPILRLGHPARLLPSVLSHSLDVLTTTSDAGAIVKDVRA 336
Query: 1047 RLD------------------------------------------QVKVVAVTCLGITNP 1064
+D + KVV T G
Sbjct: 337 EMDAKQASIRKTRNGRERRVVYTELKELRKEYRERERRCVSDLVGRSKVVLATLHGAGGY 396
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS--------TEAR 1116
L +++FDV I+DEA Q PL++A K VL GDH QLPP ++S + +
Sbjct: 397 HLKNEEFDVVIIDEASQALEAQCWVPLLWAKKAVLAGDHLQLPPTIKSLNSKASKGDQPK 456
Query: 1117 ENG--MEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
E G +E +LF RL H AI L +QYRM + IM + +Y +L +A
Sbjct: 457 ERGPTLETTLFDRLLALHGPAIKRMLTTQYRMHEKIMRFPSDELYESKL------VAAEH 510
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVN--------------------TDMLPAYEAKDH- 1212
++ L +++ + P++F++ TD A + H
Sbjct: 511 VRERLLKDLLYEVEDNDDTTEPLVFIDTQGGDFPEKNEEELDNNGSATDKKKAIKRSLHG 570
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTIDKY 1271
++ +N +EA L+ + + LV+ + +DI ++TPYN+Q +++ +E+ ++D +
Sbjct: 571 ESKSNEMEAALVKQHVRSLVEAGVRPEDIAVVTPYNAQLSILAPLKDEFPGIELGSVDGF 630
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+K+ ++ S VRS++ LG+ R+NVA+TR K+ L ++G T+ K
Sbjct: 631 QGREKEAVIFSLVRSND---EGAVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 682
>gi|346979330|gb|EGY22782.1| DNA-binding protein SMUBP-2 [Verticillium dahliae VdLs.17]
Length = 649
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/467 (27%), Positives = 214/467 (45%), Gaps = 89/467 (19%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W + SLND Q+ AI L +++ ALI G PGTGKT T++ + L+ R IL+ +N
Sbjct: 163 WIDPSLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQLVRRDQRILVCGPSNI 222
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L I +R+G + + H L + S V++++ +D
Sbjct: 223 SVDNIVERLAPHKIPIIRLGHPARLLPSVLAHSLDVLTHTSSAGAIVQDVRAEMDAKQAS 282
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L D+KFD
Sbjct: 283 LKKARTGRDRRAIYADLKDLRKEYRERERGCLRELVGGSKVVLATLHGAGGFQLRDEKFD 342
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN-------------- 1118
V I+DEA Q PL+ A+K V GDH QLPP ++S ++ N
Sbjct: 343 VVIIDEASQALEAQCWVPLLRANKVVCAGDHLQLPPTIKSLNSKTNMPKKKDEEEVPIVK 402
Query: 1119 GM--EISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
GM E +LF RL H P L +QYRM + IM + +Y RL +A +
Sbjct: 403 GMTLETTLFDRLLSLHGPSIKRMLITQYRMHEAIMRFPSDELYEGRL------VAAESVA 456
Query: 1176 VSDLSSCSPWLKEALNPCRPVIFVNTDM--LPAYEAKDH-------------QTLNNPVE 1220
L +++ + P++F++T P +D ++ +N +E
Sbjct: 457 TRLLKDMPYAVQDTEDTNEPLVFIDTQGGDFPEKSEEDSDDAAKKAKLSLNGESKSNEME 516
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTIDKYQGRDKDCI 1279
A ++ + ++LV+ I+ +DI ++TPYN+Q L+ + +E+ ++D +QGR+K+ +
Sbjct: 517 AAVVRQHARQLVEAGIKPEDIAVVTPYNAQLALLAPLKEELPGIELGSVDGFQGREKEAV 576
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+VS VRS+ + L + R+NVA+TR K+ L +VG T+ +
Sbjct: 577 IVSLVRSNG---DGEVGFLAEKRRLNVAMTRPKRSLTVVGDSETVKR 620
>gi|407927432|gb|EKG20325.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 686
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/466 (28%), Positives = 214/466 (45%), Gaps = 88/466 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W + SLND Q+ AI + +++ ALI G PGTGKT T++ + LL + +L+ +N
Sbjct: 202 WIDPSLNDSQKDAIRFAMASREVALIHGPPGTGKTHTLIELILQLLKQDLRLLVCGPSNI 261
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L + +R+G + + H L + S V++I+K +D
Sbjct: 262 SVDNIVERLAPHKVPIIRLGHPARLLPSVINHSLDVLTRTSDAAAIVQDIRKEMDAKQAS 321
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L D++FD
Sbjct: 322 IKKTRNGRERKAIYSEMRELRKDYRERERRCVDQLVKGSKVVLATLHGAGGYHLKDQQFD 381
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA--------------REN 1118
V I+DEA Q PL+ A K VL GDH QLPP ++S + +E
Sbjct: 382 VVIIDEASQALEAQCWVPLLSAKKVVLAGDHLQLPPTIKSLNSKTQKESETSDKAAQKER 441
Query: 1119 G----MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
G +E +LF RL H P L +QYRM + IM + +Y +L +A
Sbjct: 442 GKSVTLEQTLFDRLLALHGPSIKRMLTTQYRMHEKIMAFPSQELYESKL------VAAES 495
Query: 1174 IKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKD--------HQTLNNPVEAC 1222
+K L+ ++E + PV+F +T D E +D + +N +EA
Sbjct: 496 VKARLLADLPYEVQETEDTREPVVFWDTQGGDFPEKSEDEDTGKKSSLLGDSKSNEMEAA 555
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCIL 1280
L+ +LV+ + +DI ++TPYN+Q ++ L + +E+ ++D +QGR+K+ ++
Sbjct: 556 LVRLHVGKLVEAGVRAEDIAVVTPYNAQLAVLSQLLKEQFAGIELGSVDGFQGREKEAVV 615
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
VS VRS+ LG+ R+NVA+TR K+ L ++G T+ +
Sbjct: 616 VSLVRSNA---EHEVGFLGEKRRLNVAMTRPKRHLCVIGDSETVGR 658
>gi|297739693|emb|CBI29875.3| unnamed protein product [Vitis vinifera]
Length = 647
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 220/446 (49%), Gaps = 67/446 (15%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+L+ Q+ AI K L++K+ L+ G PGTGKT+T+V + + RGA IL + +N AVDN
Sbjct: 196 NLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDN 255
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
++ +L + VR+G R E+ K + L
Sbjct: 256 IVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEM--KALNGKLL 313
Query: 1034 SAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVC 1074
+ N+ +I+K L D +K VV T G + L + FD+
Sbjct: 314 KTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLV 373
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-P 1133
I+DEA Q L+ S+ +L GDH QLPP +QS EA + G+ +LF RL++ +
Sbjct: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGD 433
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+ +S L QYRM + IM S+ +Y +++ A+ +SDL +K++ +
Sbjct: 434 EVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHM---LSDLED----VKKSSSTE 486
Query: 1194 RPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
++ ++T E KD + + N EA + + LV + ++ DIGIITPY +Q
Sbjct: 487 STLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVV 546
Query: 1253 LIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
L++ + + +EI T+D +QGR+K+ I++S RS NP+ L D R+NVA+
Sbjct: 547 LLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARS--NPKK-EVGFLSDRRRMNVAV 603
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLI 1334
TRA+++ +V T++ LK LI
Sbjct: 604 TRARRQCCLVCDTETVTSDKFLKRLI 629
>gi|150004508|ref|YP_001299252.1| helicase [Bacteroides vulgatus ATCC 8482]
gi|149932932|gb|ABR39630.1| putative helicase [Bacteroides vulgatus ATCC 8482]
Length = 630
Score = 170 bits (431), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPIRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGA 311
Query: 1040 SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E I+++++ +K V+A T + N +LT +KF +DEA
Sbjct: 312 ERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILTGRKFSTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + +L GD+ QLPP ++ EA G++ +L + +++ P +S L+
Sbjct: 372 QALEPACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ ++N
Sbjct: 432 VQYRMNDEIMRFSSEWFYQGELKSAPE------VKYRSI----------LDYDTPIEWIN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMECNEEFVGESFGRINKEEAALSISQLTNYI--NKIGKDRFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|294778267|ref|ZP_06743693.1| putative DNA helicase [Bacteroides vulgatus PC510]
gi|294447895|gb|EFG16469.1| putative DNA helicase [Bacteroides vulgatus PC510]
Length = 630
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGA 311
Query: 1040 SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E I+++++ +K V+A T + N +LT +KF +DEA
Sbjct: 312 ERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILTGRKFSTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + +L GD+ QLPP ++ EA G++ +L + +++ P +S L+
Sbjct: 372 QALEPACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ ++N
Sbjct: 432 VQYRMNDEIMRFSSEWFYQGELKSAPE------VKYRSI----------LDYDTPIEWIN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMECNEEFVGESFGRINKEEAALSISQLTNYI--NKIGKDRFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|423312487|ref|ZP_17290424.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
gi|392688175|gb|EIY81464.1| hypothetical protein HMPREF1058_01036 [Bacteroides vulgatus
CL09T03C04]
Length = 630
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGA 311
Query: 1040 SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E I+++++ +K V+A T + N +LT +KF +DEA
Sbjct: 312 ERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILTGRKFSTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + +L GD+ QLPP ++ EA G++ +L + +++ P +S L+
Sbjct: 372 QALEPACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ ++N
Sbjct: 432 VQYRMNDEIMRFSSEWFYQGELKSAPE------VKYRSI----------LDYDTPIEWIN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMECNEEFVGESFGRINKEEAALSISQLTNYI--NKIGKDRFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|345518256|ref|ZP_08797710.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
gi|254835551|gb|EET15860.1| hypothetical protein BSFG_02007 [Bacteroides sp. 4_3_47FAA]
Length = 630
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGA 311
Query: 1040 SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E I+++++ +K V+A T + N +LT +KF +DEA
Sbjct: 312 ERENIRQKINSLKDRATELEIRVNEALFGEARVIACTLVSSANRILTGRKFSTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + +L GD+ QLPP ++ EA G++ +L + +++ P +S L+
Sbjct: 372 QALEPACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ ++N
Sbjct: 432 VQYRMNDEIMRFSSEWFYQGELKSAPE------VKYRSI----------LDYDTPIEWIN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMECNEEFVGESFGRINKEEAALSISQLTNYI--NKIGKDRFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|402220492|gb|EJU00563.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 868
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 219/491 (44%), Gaps = 113/491 (23%)
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR- 987
V DP L LN+ Q RA+ +L+ K +L+ G PGTGKT T++ A + L +
Sbjct: 342 VVEGDPVLD-------LNETQTRAVALMLS-KRLSLVQGPPGTGKTKTIIEAARLLKLHF 393
Query: 988 --GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHK-EIQKHCLSAMNI-----N 1039
+L+ +YTN AVDNL+ L + + +R+G E + ++ KH L
Sbjct: 394 EVPQPLLVATYTNVAVDNLVAGLAAAGLRPLRVGGEEYSQQPKLDKHRLEVKIAAHPLQK 453
Query: 1040 SVEEIKKRLD-------------------------------------------------- 1049
VE+++K +D
Sbjct: 454 EVEKLEKAIDKLSDRRREAIDAAKPSKNEERIERAKNTHKEHLLRLKMKKFAIRNAMIHD 513
Query: 1050 ---QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV-LVGDHYQ 1105
+ VV TCL N L F V +DEA +T P SL PLM S+ V L+GDH Q
Sbjct: 514 IVSKADVVCTTCLTSANTALNVIDFPVVFLDEASMSTEPASLIPLMKGSRHVALIGDHKQ 573
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
LPP++ S EA+ G+ SLF RL+EE L QYRM I +A Y L G
Sbjct: 574 LPPIITSAEAQAGGLSKSLFERLTEEGDTPSIMLDMQYRMHPSISRFPSAQFYNKTLRDG 633
Query: 1166 SDE--------IANAKIKVSDLSSCSPWL--KEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
+ + +A K + D S S KE L+ V+FV+ EAK ++
Sbjct: 634 TVDHAGKVRPSLAPPKSTLLDDESVSELQTEKERLS----VVFVDH---AGSEAKKDRSR 686
Query: 1216 NNPVEACLIAKITQELV--KNEIEGKDIGIITPYNSQANLI------------------- 1254
N EA ++ I +EL+ + G DIGII PY +Q L+
Sbjct: 687 INAGEAQMVCSIVEELLYCNPSMTGDDIGIIAPYVAQIRLLDRLLKHDQEQAERFKSTLG 746
Query: 1255 -RHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
L +S++E+ T+D ++GR+K+ I+ S VR+ NP+ L D R+NV LTRA++
Sbjct: 747 EHRGLQMSNIEVKTVDGFEGREKEVIIFSTVRN--NPQGAI-GFLADGRRLNVGLTRARR 803
Query: 1314 KLIMVGSCRTL 1324
L ++G+ TL
Sbjct: 804 ALFVLGNAGTL 814
>gi|319643934|ref|ZP_07998509.1| helicase [Bacteroides sp. 3_1_40A]
gi|317384458|gb|EFV65425.1| helicase [Bacteroides sp. 3_1_40A]
Length = 630
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 217/455 (47%), Gaps = 83/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A+ KV+ AKD A++ G PGTGKT+T+V A+ L R +++ + +N AVD +
Sbjct: 192 LNNTQEEAVNKVMHAKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVMVCAQSNMAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ +
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLAFTYERRFESHPDYPQLWSIRKAIRELYGRSRKGA 311
Query: 1040 SVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAG 1080
E I+++++ +K V+A T + N +LT +KF +DEA
Sbjct: 312 ERENIRQKINSLKDRATELEIRINEALFGEARVIACTLVSSANRILTGRKFSTLFIDEAA 371
Query: 1081 QTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQ 1140
Q P + A + +L GD+ QLPP ++ EA G++ +L + +++ P +S L+
Sbjct: 372 QALEPACWIAIRKADRVILAGDYCQLPPTIKCMEAARGGLDRTLMQEIADNKPDTVSLLK 431
Query: 1141 SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
QYRM IM S+ Y L + +K + L+ P+ ++N
Sbjct: 432 VQYRMNDEIMRFSSEWFYQGELKSAPE------VKYRSI----------LDYDTPIEWIN 475
Query: 1201 TDMLPAYEAKDHQTLN--NPVEACL-IAKITQELVKNEI-------EGKDIGIITPYNSQ 1250
T+ + E ++ N EA L I+++T + N+I E D+G+I+PY +Q
Sbjct: 476 TEGMECNEEFVGESFGRINKEEAALSISQLTNYI--NKIGKDRFLEERIDVGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + + + I+T+D +QG+++D IL+S VR++E + L D
Sbjct: 534 VQYLRQLIKRDAFFKPYRHLITINTVDGFQGQERDVILISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KLI++G TL+K P K L +
Sbjct: 591 RMNVAITRARMKLIILGDASTLTKHPFYKKLYEYI 625
>gi|225441756|ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
Length = 647
Score = 170 bits (430), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 220/446 (49%), Gaps = 67/446 (15%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+L+ Q+ AI K L++K+ L+ G PGTGKT+T+V + + RGA IL + +N AVDN
Sbjct: 196 NLDRSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDN 255
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
++ +L + VR+G R E+ K + L
Sbjct: 256 IVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEM--KALNGKLL 313
Query: 1034 SAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVC 1074
+ N+ +I+K L D +K VV T G + L + FD+
Sbjct: 314 KTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLV 373
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-P 1133
I+DEA Q L+ S+ +L GDH QLPP +QS EA + G+ +LF RL++ +
Sbjct: 374 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGD 433
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+ +S L QYRM + IM S+ +Y +++ A+ +SDL +K++ +
Sbjct: 434 EVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHM---LSDLED----VKKSSSTE 486
Query: 1194 RPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
++ ++T E KD + + N EA + + LV + ++ DIGIITPY +Q
Sbjct: 487 STLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVV 546
Query: 1253 LIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
L++ + + +EI T+D +QGR+K+ I++S RS NP+ L D R+NVA+
Sbjct: 547 LLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARS--NPKK-EVGFLSDRRRMNVAV 603
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLI 1334
TRA+++ +V T++ LK LI
Sbjct: 604 TRARRQCCLVCDTETVTSDKFLKRLI 629
>gi|402304960|ref|ZP_10824023.1| AAA domain protein [Prevotella sp. MSX73]
gi|400380746|gb|EJP33559.1| AAA domain protein [Prevotella sp. MSX73]
Length = 621
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 213/449 (47%), Gaps = 71/449 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +V+ AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 174 LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 233
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAMNI- 1038
KL + I+ +RIG R E + K I++
Sbjct: 234 CEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIRELRSRRRRGS 293
Query: 1039 ----NSVEEIKKR------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
+E +K R + +V+A T +G + LL +K+ +DEA Q
Sbjct: 294 GDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQKYATLFIDEAAQA 353
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P+ AS+ VL GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 354 LEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIVENKPEVVTLLKVQ 413
Query: 1143 YRMCQGIMELSNALIY-GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP--------- 1192
YRM + IM S+ Y G+ +S + +I + I D W +L P
Sbjct: 414 YRMNEQIMRFSSDWFYHGEVVS--APQIRHRGI--LDYDHPMEWKTNSLTPSPSSGEEGE 469
Query: 1193 CRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
FV++ + + TL E KI ++ + + E D+GII+PY +Q
Sbjct: 470 AAGESFVSSSFGRINKGEAELTLGTLEE--YFTKIGKQRILD--ERIDVGIISPYRAQVQ 525
Query: 1253 LIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+R + + ++T+D +QG+++D IL+S VRS++ + L D R+
Sbjct: 526 YLRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ---IGFLRDLRRM 582
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
NVA+TRA+ KLI++G TL + P K L
Sbjct: 583 NVAITRARMKLIILGDVSTLGRHPFYKKL 611
>gi|134078610|emb|CAK32628.1| unnamed protein product [Aspergillus niger]
Length = 723
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 145/488 (29%), Positives = 227/488 (46%), Gaps = 102/488 (20%)
Query: 922 PRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA 980
P +DS G++ DP +LND Q+ AI L A++ ALI G PGTGKT T++
Sbjct: 228 PDYDSIGALEFTDP---------TLNDSQKEAIRFALAAREIALIHGPPGTGKTHTLIEL 278
Query: 981 VKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
+ ++ R +L+ +N +VDN++ +L + + VRIG + + H L + S
Sbjct: 279 IVQMVQRKQRVLVCGPSNISVDNIVERLAPKKVPVVRIGHPARLLPSVLDHSLEVLTHTS 338
Query: 1041 -----VEEIKKRLDQVK------------------------------------------V 1053
V +++K +DQ + V
Sbjct: 339 EAAAIVRDVRKEIDQKQASIRKTRAARERRAIYDDLRELRREFRERENKCVENLVRESSV 398
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST 1113
V T G L ++KFDV I+DEA Q PL+ ASK VL GDH QLPP V+ST
Sbjct: 399 VLATLHGAGGHQLKNQKFDVVIIDEASQALEAQCWIPLLSASKVVLAGDHLQLPPTVKST 458
Query: 1114 ------------------EAREN-GMEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELS 1153
E EN +E +LF RL H I L +QYRM + IM+
Sbjct: 459 KENAKKAAKEKEDKKENGELLENVSLETTLFDRLLSMHGPGIKRMLTTQYRMHEKIMQFP 518
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-LKEALNPCRPVIFVNT----------D 1202
+ +Y +L +D + + +K DL P+ ++E + P++F +T D
Sbjct: 519 SDELYDSKL-MAADSVKDRLLK--DL----PYEVEETDDTKEPLVFWDTQGGDFPEKTED 571
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SV 1260
+A ++ +N +EA ++++ LV I +DI +ITPYN Q ++ L
Sbjct: 572 ADLGKKAHLGESKSNDMEALVVSRHVDALVDAGIHPEDIAVITPYNGQLAVLSQMLREKY 631
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN--VALTRAKKKLIMV 1318
S+E+ ++D +QGR+K+ ++VS VRS+ LG+ R+N VA+TR K+ L +
Sbjct: 632 PSIELGSVDGFQGREKEAVVVSLVRSNSEHE---VGFLGERRRLNALVAMTRPKRHLCIC 688
Query: 1319 GSCRTLSK 1326
G T+SK
Sbjct: 689 GDSETISK 696
>gi|340380524|ref|XP_003388772.1| PREDICTED: DNA-binding protein SMUBP-2-like [Amphimedon
queenslandica]
Length = 1025
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 162/600 (27%), Positives = 270/600 (45%), Gaps = 106/600 (17%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRL---AVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
+PT + C GD V + ++ L + SG++ + S H+ V+F + LP S
Sbjct: 73 LPTHSITC----GDIVGIFSKGQSLLPGQLVSGVVVKSSDVHLGVAFEE---LPEEVSLG 125
Query: 872 D----------ADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQS---AQSSQLRRMIVD 918
A+ + ++ + +++ + ++ +LV + Q+ S +D
Sbjct: 126 GLGDCLQVVKLANDITYKRMKRALNDLKSMDPILSSHLVDVLFQATPPGPSHSKWTYQLD 185
Query: 919 LEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMV 978
+FDS + + +SL+ Q+RA+ L+ D A+I G PGTGKT+T++
Sbjct: 186 QLQTQFDSSD---------FKFFNQSLDSSQKRAVFFALSRPDVAIIHGPPGTGKTTTVI 236
Query: 979 -HAVKALLMRGASILLTSYTNSAVDNLLIKLKSQS--IDFVRIGRHEV------------ 1023
+ ++ L +L + +N AVDNL+ +L + S + +R+G H
Sbjct: 237 EYILQETLTLNNKVLAVAPSNIAVDNLVERLAASSPKLKIIRLG-HPARLVQSVLQYSLD 295
Query: 1024 --------------VHKEIQKHCLSAMNINSVEEIKKRLDQVK----------------- 1052
V KE+ A N S E +K + K
Sbjct: 296 SILASTDGSDIVLDVRKEMSSAWSKAGNAKSSSERRKWHTEAKTLKKELIEREEKLVQQI 355
Query: 1053 -----VVAVTCLGIT--NPL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDH 1103
V+ T G T PL L FDV ++DE Q+ PL A K +L GDH
Sbjct: 356 LSGANVILATNTGATPTGPLKHLPIDHFDVVVIDECAQSLEASCWIPLSRAPKCILAGDH 415
Query: 1104 YQLPPLVQSTEARENGMEISLFRRL-SEEHPQAISALQSQYRMCQGIMELSNALIYGDRL 1162
QLPP + S +A +G+ ++L RL S Q + L +QYRM IM+ + +Y D L
Sbjct: 416 KQLPPTILSDKAARDGLAVTLMERLVSVYRDQVTTLLTTQYRMNHNIMKWPSQYLYEDSL 475
Query: 1163 SCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE--AKDHQTLNNPVE 1220
+ + +++ +K DL P + P++F++T YE ++ N E
Sbjct: 476 T-AHESVSHHLLK--DL----PTVTITTATTIPLLFIDTASCGLYELDTPSEESKGNEGE 528
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-----SVSSVEIHTIDKYQGRD 1275
A ++ +EL+ + DI II PY+ Q +IR L S VE+HT+D +QGR+
Sbjct: 529 AEIVLAHVKELIGAGVREGDIAIIAPYHLQVGMIRERLEANGISTGKVEVHTVDGFQGRE 588
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K+ +++SF RS+ + L + R NVA+TRA++ L MVG T+S+ P +K L+
Sbjct: 589 KEAVIISFTRSN---KKGEFGFLKEQRRTNVAVTRARRHLAMVGDSETISREPFIKGLLE 645
>gi|325280121|ref|YP_004252663.1| helicase [Odoribacter splanchnicus DSM 20712]
gi|324311930|gb|ADY32483.1| putative helicase [Odoribacter splanchnicus DSM 20712]
Length = 627
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 215/451 (47%), Gaps = 71/451 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +VL AK+ A++ G PGTGKT+T+V AV L R +++++ +N+AVD +
Sbjct: 188 LNASQEKAVNQVLCAKEVAVVHGPPGTGKTTTLVEAVYETLHRENQVMVSAQSNTAVDWI 247
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHC------- 1032
KL + I +RIG R E + K I++
Sbjct: 248 AEKLVDRGIPVLRIGNPTRVNDKMLAFTYERRFEAHSDYPELWQIRKTIREMTGRLRKSG 307
Query: 1033 ----------LSAMNINSVEEIKKRLD-----QVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
L+ + + + ++ R+D + +V+A T +G + +L K+F +D
Sbjct: 308 REDRERLHNQLTKLRVRATG-LEIRIDTELFTEARVIACTLVGAASRVLERKRFSSLFID 366
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + A + +L GDH QLPP ++ EA G+ +L ++ P+ +S
Sbjct: 367 EAAQAIEAACWIAISRADRVILAGDHCQLPPTIKCIEAARGGLGRTLLEKVVLHKPETVS 426
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA-LNPCRPV 1196
L+ QYRM + IM + Y D L + + D + W+ + L+
Sbjct: 427 LLKIQYRMHEDIMRFPSRWFYHDELEAAPEVKYRG---ILDFDTPVSWIDTSELDLQEKA 483
Query: 1197 IFVNTDMLPAYEAKDH-QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
+ T L EA+ + L N +E I +I +E + D G+I+PY +Q + +R
Sbjct: 484 VAEGTGRLNTGEAELLVRELKNYMERIGIRRILEEHI-------DFGVISPYRAQVHYLR 536
Query: 1256 HSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
H L + +HT+D +QG+++D I++S VR++E + L D R+NVA
Sbjct: 537 HLLKKEPFFRPCRRLITVHTVDGFQGQERDVIMISLVRANEKGQ---IGFLRDLRRMNVA 593
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
+TRA+ KL+++G TL++ P + L +G
Sbjct: 594 ITRARMKLLILGEAVTLTRHPFYRELYEYIG 624
>gi|308810357|ref|XP_003082487.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
gi|116060956|emb|CAL56344.1| tRNA-splicing endonuclease positive effector (SEN1) (ISS)
[Ostreococcus tauri]
Length = 1079
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 201/416 (48%), Gaps = 38/416 (9%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASI 991
D + I LN QR A+ K + LI G PGTGKT T V V+ +L G +
Sbjct: 620 DRVVDNITRNHGLNASQRDAM-KAALERRLTLIQGPPGTGKTHTSVAIVRGMLEIGHGPV 678
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL------SAMNINSVEEIK 1045
L TS +N+AVDN++ L ++ +R+GR E V ++ ++ + A + E
Sbjct: 679 LCTSDSNTAVDNMVEGLAKAGVNVIRLGRPEAVRPDLARYQIENAIPPGATKHEAYEAQL 738
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHY 1104
+ + + + TC G + L F ++DEA Q T P+SL PL + VLVGDH
Sbjct: 739 RAVRYAQAICATCSGAGSDFLDRINFSAVMLDEASQVTEPMSLVPLANGCQQLVLVGDHK 798
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPP V S EA GM +SLF RL+ + L +Q+RM I + Y +
Sbjct: 799 QLPPTVVSREAELAGMTLSLFDRLTRAGVKPY-LLDTQFRMHPAISHFPSHSFYNGLVKS 857
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
G+ AK + + P P P+ F T + E D+ + +N VEA +
Sbjct: 858 GTP----AKDRPAPKGFQWPI------PSVPIAFCPTPE-NSKETNDNLSYSNRVEAERV 906
Query: 1225 AKI-TQELVKNEIEGKDIGIITPYNSQANLIRHSL-------------SVSSVEIHTIDK 1270
+I L E+ +GI+TPY +Q LIR L + +E+ ++D
Sbjct: 907 LEILLGVLSAGELRPCHVGIVTPYAAQVKLIRSMLRQRGVRTGVDRDTGEAGIEVSSVDG 966
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
YQGR+K+ ++VS VR+ N N T + D R NV LTRA++ +I+VG TLSK
Sbjct: 967 YQGREKELMIVSTVRA--NDLN-TIGFVADARRCNVTLTRARRGVIVVGHASTLSK 1019
>gi|85014475|ref|XP_955733.1| DNA helicase [Encephalitozoon cuniculi GB-M1]
gi|19171427|emb|CAD27152.1| DNA REPLICATION HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 934
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 192/392 (48%), Gaps = 83/392 (21%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQR A+ L ++Y +I GMPGTGK++ + +K L +LL YTN A+ N+
Sbjct: 623 LNDDQRSALFLSLNCRNYRIIHGMPGTGKSTLICLLIKILAYLKKKVLLICYTNLALANI 682
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
KL I G+ EV K +VEE D++++V TC +P
Sbjct: 683 TKKL--NGIRIYAAGKEEVSFK-------------TVEEAGLFFDRIELVVGTCFSFADP 727
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ +++FD C++DE Q L ++L P+ + KFV+VGDH QL PL +S++ + +SL
Sbjct: 728 IYVNRQFDFCVIDEGSQMHLLLTLIPVSISKKFVIVGDHLQLKPLSRSSK----DLSLSL 783
Query: 1125 FRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
F L E+H S L++QYRM IM LSN L YG++L + K S
Sbjct: 784 FEHLLGEDH----SKLRTQYRMGSEIMRLSNTLFYGNQL--------RGEKKPS------ 825
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
V F++T E D +L + E C I
Sbjct: 826 -----------TVQFIDT------EGIDFMSLVSSFEKC-------------------TI 849
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ +N+Q LIR +S + T+D++QG + D ++V F S+ ++ R
Sbjct: 850 LCYFNAQVGLIREK---TSCAVETVDRFQGSEDDKVVVVFDPVSK------CEVMESNER 900
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+NVALTRA+K L++VGS + ++ +LK L++
Sbjct: 901 LNVALTRARKHLVLVGSRSKMMEIEILKRLMS 932
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 45/246 (18%)
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---KCSERSISALLGTLLHQIFQAGLMK 499
N+L+V D ++ T + S +C R ++ R+ K S I L+G ++H + + L++
Sbjct: 173 NYLLVEDDP-IAITTLCESLTCRNRHYVNSRIASIKFSHTDIRILVGVIVHSVMEKALIQ 231
Query: 500 EIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP 559
+ + FL A+ + +N+ ++ CGV+E + + K++ I LF++ +
Sbjct: 232 KSFALDFLIGQAKREISRNVILMHRCGVDE----RVALNETLKLIKNIYLFREQR----- 282
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
+V + E+ + + +KG DA G LE K
Sbjct: 283 --------------FDVVETEKRLMSLLFNIKGNADAV-------------GTDTVLEIK 315
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
+ + EHRAQV+LY L++ E+ + LYY+ + + V ++ ++ L+
Sbjct: 316 STR----SRRAEHRAQVMLYALMLKEKTGRDF-LPYLYYIPARELVEVKLKHQEIRSLLN 370
Query: 680 RRNEFA 685
RN A
Sbjct: 371 LRNRIA 376
>gi|315607147|ref|ZP_07882151.1| helicase [Prevotella buccae ATCC 33574]
gi|315251201|gb|EFU31186.1| helicase [Prevotella buccae ATCC 33574]
Length = 634
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 210/448 (46%), Gaps = 69/448 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +V+ AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 187 LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 246
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAMNI- 1038
KL + I+ +RIG R E + K I++
Sbjct: 247 CEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIRELRSRRRRGS 306
Query: 1039 ----NSVEEIKKR------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
+E +K R + +V+A T +G + LL +K+ +DEA Q
Sbjct: 307 GDYHQKLERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQKYATLFIDEAAQA 366
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P+ AS+ VL GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 367 LEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIVENKPEVVTLLKVQ 426
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP---------C 1193
YRM + IM S+ Y + + +I + I D W +L P
Sbjct: 427 YRMNEQIMRFSSDWFYHGEV-VSAPQIRHRGI--LDYDHPMEWKTNSLTPSPSSGEEGEA 483
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
FV++ + + TL E KI ++ + + E D+GII+PY +Q
Sbjct: 484 AGESFVSSSFGRINKGEAELTLGTLEE--YFTKIGKQRILD--ERIDVGIISPYRAQVQY 539
Query: 1254 IRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+R + + ++T+D +QG+++D IL+S VRS++ + L D R+N
Sbjct: 540 LRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ---IGFLRDLRRMN 596
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
VA+TRA+ KLI++G TL + P K L
Sbjct: 597 VAITRARMKLIILGDVSTLGRHPFYKKL 624
>gi|212225034|ref|YP_002308270.1| DNA helicase [Thermococcus onnurineus NA1]
gi|212009991|gb|ACJ17373.1| DNA helicase [Thermococcus onnurineus NA1]
Length = 660
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 152/260 (58%), Gaps = 12/260 (4%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L P+ A +FVL GDH QLPP + S +ARE + +LF L E
Sbjct: 378 YDVAIIDEATQATIPSVLIPINRAKRFVLAGDHRQLPPTILSEKARE--LSRTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSC--GSDEIANAKIKVSDLSSCSPWLKE 1188
+P+ + L QYRM + +ME N Y ++ G I + + + PW E
Sbjct: 436 RYPEDSAMLTVQYRMNERLMEFPNREFYDGKIKAAPGVKCITLTDLGIKCPNFGEPW-DE 494
Query: 1189 ALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L ++F++T P + + ++ NP+EA ++A+ ++L++ ++ + IG+IT
Sbjct: 495 ILKAGNVLVFIDTSKHPEKWERQRRGSESRENPLEARIVAETVEKLLEMGVKPEWIGVIT 554
Query: 1246 PYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
PY+ Q +LI SL +E+ T+D YQGR+K+ I++SFVRS+E L D R+N
Sbjct: 555 PYDDQRDLI-SSLVPEEIEVRTVDGYQGREKEVIILSFVRSNE---RGEVGFLKDLRRLN 610
Query: 1306 VALTRAKKKLIMVGSCRTLS 1325
V+LTRAK+KLI+VG TLS
Sbjct: 611 VSLTRAKRKLIVVGDSETLS 630
Score = 67.0 bits (162), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+KSLN QRRAI + L + ++ LI G GTGKT T+ ++ + RG +L T+ +N AV
Sbjct: 168 DKSLNASQRRAISQALGSPNFFLIHGPFGTGKTRTLAELIRQEVERGHKVLATAESNVAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DNL+ +L + VRIG V K + + L+ +
Sbjct: 228 DNLVERLAESGLKIVRIGHPSRVSKHLHETTLAYL 262
>gi|356504807|ref|XP_003521186.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 648
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 220/459 (47%), Gaps = 69/459 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K+L+ Q+ A+ K L++K+ L+ G PGTGKT+T+V + + RG+ IL + +N AVD
Sbjct: 196 KNLDHSQKEAVSKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVD 255
Query: 1003 NLLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHC 1032
N++ +L + VR+G R E+ K +
Sbjct: 256 NIVERLVPHRVKLVRVGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEM--KALNGKL 313
Query: 1033 LSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDV 1073
L + N+ ++I++ L D +K V+ T +G + L FD+
Sbjct: 314 LKTKDRNTRKDIQRELRTLSKEERKRQQLAVTDVLKSADVILTTLIGAFSKKLDSTSFDL 373
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
I+DEA Q P++ S+ +L GDH QLPP +QS EA + G+ +LF RL+E +
Sbjct: 374 VIIDEAAQALEIACWIPILKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLAEMYG 433
Query: 1134 QAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
I S L QYRM + IM+ S+ +Y ++ A+ + DL + N
Sbjct: 434 DEITSMLTIQYRMHELIMDWSSKELYNSKIKAHPSVTAHM---LYDLEGV-----KRTNS 485
Query: 1193 CRP-VIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
P ++ ++T E KD + + N EA + + LV++ + DIGIITPY +Q
Sbjct: 486 TEPTLLLIDTAGCDMEEKKDEEDSTFNEGEAEVTVTHAKRLVQSGVLPSDIGIITPYAAQ 545
Query: 1251 ANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
L++ + VEI T+D +QGR+K+ I++S VRS+ L D R+NV
Sbjct: 546 VVLLKMLKNKEDQLKDVEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDRRRMNV 602
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
A+TR++++ +V T+S LK LI E L+
Sbjct: 603 AVTRSRRQCCLVCDTETVSGDGFLKRLIEYFEEHGEYLS 641
>gi|15642780|ref|NP_227821.1| DNA helicase [Thermotoga maritima MSB8]
gi|4980488|gb|AAD35099.1|AE001689_5 DNA helicase, putative [Thermotoga maritima MSB8]
Length = 650
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 16/295 (5%)
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+ +VV T +L+ FDV ++DEA Q T+P L P+ KFVL GDH QLPP
Sbjct: 356 EAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPT 415
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+ S +A++ + +LF L +P+ S L +QYRM + +ME + Y +L ++++
Sbjct: 416 ILSEDAKD--LSRTLFEELITRYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKA-AEKV 472
Query: 1170 ANAKIKVSDLSSCSP----WLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEAC 1222
N I + DL P + L+P ++F++T + KD + NP+EA
Sbjct: 473 RN--ITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQ 530
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVS 1282
++ ++ ++L+ ++ IGIITPY+ Q NLIR L + VE+H++D +QGR+K+ I++S
Sbjct: 531 IVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRE-LIEAKVEVHSVDGFQGREKEVIIIS 589
Query: 1283 FVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
FVRS+ +N L D R+NV+LTRAK+KLI G TLS P + + V
Sbjct: 590 FVRSN---KNGEIGFLEDLRRLNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ + RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|374723515|gb|EHR75595.1| putative DNA helicase [uncultured marine group II euryarchaeote]
Length = 662
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 140/439 (31%), Positives = 205/439 (46%), Gaps = 73/439 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVD 1002
+LN QR A+ L + LI G PGTGKT T VH + AL+ G IL T+ +N AVD
Sbjct: 213 TLNPSQRAAVESALERR-LTLIQGPPGTGKTHTAVHLLSALVNIGRGPILATAESNVAVD 271
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-------------------------- 1036
NLL L + VRIGR V + +++ L A
Sbjct: 272 NLLEGLLELGVKAVRIGRPVKVREHLRQATLDAQIERHPLQEELRFVREQNDELRRSLSG 331
Query: 1037 ------------------NINSVEE--IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIM 1076
+ S+E I LD +V+ T +G+ + LL D++F V +M
Sbjct: 332 LKGKEKGMAHKDVNRNFKEMRSIEANMIASVLDGAEVICATTIGVGHKLLRDRRFPVVLM 391
Query: 1077 DEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
DEA Q + P +L P+ + VLVGDH QLPP V S A++ G+ SLF RL+E
Sbjct: 392 DEATQASEPSALVPITRGCRQLVLVGDHKQLPPTVISEAAQQGGLGQSLFERLTECGLDT 451
Query: 1136 ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP 1195
L +QYRM I E +A Y DRL G +D + +L + P
Sbjct: 452 -HMLTTQYRMHPTIREYPSARFYEDRLDDGCTP--------ADRPPAAGFLWPDWD--HP 500
Query: 1196 VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI- 1254
V FV D + + N A +++ + L ++ DIG+ITPY+ Q L+
Sbjct: 501 VAFVPIDGSEIVDEEGSSKSNLDEAAKVLSIVNGLLSAGDLTPADIGVITPYSGQVRLLV 560
Query: 1255 ---------RHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+ +EI ++D YQGR+K+ I+ S VR++E + L D R+N
Sbjct: 561 DLFEQAGGREEGAPYAGLEIKSVDGYQGREKEIIVFSAVRANE---HGEIGFLRDRRRLN 617
Query: 1306 VALTRAKKKLIMVGSCRTL 1324
VA+TRA++ LI++G+ +TL
Sbjct: 618 VAITRARRGLIVLGNTKTL 636
>gi|418045943|ref|ZP_12684037.1| DNA helicase, partial [Thermotoga maritima MSB8]
gi|351675496|gb|EHA58656.1| DNA helicase, partial [Thermotoga maritima MSB8]
Length = 642
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 166/295 (56%), Gaps = 16/295 (5%)
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL 1109
+ +VV T +L+ FDV ++DEA Q T+P L P+ KFVL GDH QLPP
Sbjct: 356 EAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPT 415
Query: 1110 VQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+ S +A++ + +LF L +P+ S L +QYRM + +ME + Y +L ++++
Sbjct: 416 ILSEDAKD--LSRTLFEELITRYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKA-AEKV 472
Query: 1170 ANAKIKVSDLSSCSP----WLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEAC 1222
N I + DL P + L+P ++F++T + KD + NP+EA
Sbjct: 473 RN--ITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQ 530
Query: 1223 LIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVS 1282
++ ++ ++L+ ++ IGIITPY+ Q NLIR L + VE+H++D +QGR+K+ I++S
Sbjct: 531 IVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRE-LIEAKVEVHSVDGFQGREKEVIIIS 589
Query: 1283 FVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
FVRS+ +N L D R+NV+LTRAK+KLI G TLS P + + V
Sbjct: 590 FVRSN---KNGEIGFLEDLRRLNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ + RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|288926626|ref|ZP_06420541.1| DNA helicase [Prevotella buccae D17]
gi|288336595|gb|EFC74966.1| DNA helicase [Prevotella buccae D17]
Length = 634
Score = 169 bits (428), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 209/448 (46%), Gaps = 69/448 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +V+ AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 187 LNPTQEQAVNEVMRAKDVAIVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 246
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAMNI- 1038
KL + I+ +RIG R E + K I++
Sbjct: 247 CEKLTDRGINVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLWAIRKTIRELRSRRRRGS 306
Query: 1039 ----NSVEEIKKR------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
+E +K R + +V+A T +G + LL +K+ +DEA Q
Sbjct: 307 GDYHQKMERLKSRAAEIEIRINSELFGEARVIASTLVGSAHRLLDGQKYATLFIDEAAQA 366
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P+ AS+ VL GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 367 LEAACWIPIRKASRVVLAGDHCQLPPTVKSIAALRAGLGKTLMERIVENKPEVVTLLKVQ 426
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP---------C 1193
YRM + IM S+ Y + + +I + I D W +L P
Sbjct: 427 YRMNEQIMRFSSDWFYHGEV-VSAPQIRHRGI--LDYDHPMEWKTNSLTPSPSSGEEGEA 483
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANL 1253
FV++ + + TL E KI + + +E D+GII+PY +Q
Sbjct: 484 AGESFVSSSFGRINKGEAELTLGTLEE--YFTKIGKRRILDE--RIDVGIISPYRAQVQY 539
Query: 1254 IRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+R + + ++T+D +QG+++D IL+S VRS++ + L D R+N
Sbjct: 540 LRQLIRKREFFKPYRQCITVNTVDGFQGQERDIILISLVRSNDEGQ---IGFLRDLRRMN 596
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
VA+TRA+ KLI++G TL + P K L
Sbjct: 597 VAITRARMKLIILGDVSTLGRHPFYKKL 624
>gi|148270052|ref|YP_001244512.1| putative DNA helicase [Thermotoga petrophila RKU-1]
gi|147735596|gb|ABQ46936.1| putative DNA helicase [Thermotoga petrophila RKU-1]
Length = 650
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 158/274 (57%), Gaps = 16/274 (5%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ KFVL GDH QLPP + S +A++ + +LF L
Sbjct: 377 FDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKD--LSRTLFEELIT 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP----WL 1186
+P+ S L +QYRM + +ME + Y +L ++++ N I + DL P +
Sbjct: 435 RYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKA-AEKVRN--ITLFDLGVEIPNFGKFW 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L+P ++F++T + KD + NP+EA ++ ++ ++L+ ++ IGI
Sbjct: 492 DVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGI 551
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q NLIR L + VE+H++D +QGR+K+ I++SFVRS+ +N L D R
Sbjct: 552 ITPYDDQVNLIRE-LIEAKVEVHSVDGFQGREKEVIIISFVRSN---KNGEIGFLEDLRR 607
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+NV+LTRAK+KLI G TLS P + + V
Sbjct: 608 LNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ + RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|390960972|ref|YP_006424806.1| DNA helicase [Thermococcus sp. CL1]
gi|390519280|gb|AFL95012.1| DNA helicase [Thermococcus sp. CL1]
Length = 660
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 161/283 (56%), Gaps = 18/283 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV ++DEA Q T+P L P+ A +FVL GDH QLPP + S +A+E G +LF L E
Sbjct: 382 YDVAVIDEATQATIPSVLIPINRARRFVLAGDHKQLPPTILSEKAKELGK--TLFEGLIE 439
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-----W 1185
+P+ L QYRM + +M + Y R+ DE + I + DL SP W
Sbjct: 440 RYPEKSEMLTVQYRMNERLMRFPSREFYDGRIEA--DESVRS-ITLVDLGVESPDEGDVW 496
Query: 1186 LKEALNPCRPVIFVNTDMLP-AYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
E L P ++F++T +E + + ++ NP+EA L+ + + L+K + + IG
Sbjct: 497 -AEVLKPGNVLVFIDTARRENRFERQRYGSESRENPLEARLVREAIERLLKLGVRSEWIG 555
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+ITPY+ Q +LI SL VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 556 VITPYDDQRDLI-SSLLPEEVEVKTVDGYQGREKEVIVLSFVRSN---KRGELGFLKDLR 611
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NV+LTRAK+KLI++G TLS K L+ V E+ +++
Sbjct: 612 RLNVSLTRAKRKLILIGDSSTLSAHATYKRLVEFVRERETVVD 654
Score = 67.4 bits (163), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+++LN QR+A+ + L + D+ LI G GTGKT T+V ++ + RG +L T+ +N AV
Sbjct: 172 DRNLNASQRKAVARALGSDDFFLIHGPFGTGKTRTLVELIRQEVARGNKVLATAESNVAV 231
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DNL+ +L + + VRIG V K + + L+ +
Sbjct: 232 DNLVERLANSGLKVVRIGHPSRVSKNLHETTLAYL 266
>gi|57640113|ref|YP_182591.1| UvrD/REP family DNA helicase [Thermococcus kodakarensis KOD1]
gi|57158437|dbj|BAD84367.1| DNA helicase, UvrD/REP family [Thermococcus kodakarensis KOD1]
Length = 661
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 178/330 (53%), Gaps = 19/330 (5%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTD-KKFDVCIMDEAGQT 1082
+++++QK A + E I + + Q V +T + D ++DV ++DEA Q
Sbjct: 337 INQQVQKTFDDARKLE--ERIAREIIQEADVVLTTNASAGLEVVDYGEYDVAVIDEATQA 394
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
T+P L P+ A +FVL GDH QLPP + S +A+E + +LF L E +P+ L Q
Sbjct: 395 TIPSVLIPINRAKRFVLAGDHKQLPPTILSEKAKE--LSKTLFEGLIERYPEKSEMLTVQ 452
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP----WLKEALNPCRPVIF 1198
YRM + +ME + Y ++ + + N I ++DL P + EAL P ++F
Sbjct: 453 YRMNERLMEFPSREFYDGKIKA-HESVKN--ITLADLGVSEPEFGNFWDEALKPENVLVF 509
Query: 1199 VNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR 1255
++T + + + NP+EA L+ + ++L++ ++ IG+ITPY+ Q +LI
Sbjct: 510 IDTSKREDRFERQRRGSDSRENPLEAKLVTETVEKLLEMGVKPDWIGVITPYDDQRDLI- 568
Query: 1256 HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
S+ +E+ T+D YQGR+K+ I++SFVRS+ R L D R+NV+LTRAK+KL
Sbjct: 569 SSMVGEDIEVKTVDGYQGREKEIIVLSFVRSN---RRGELGFLTDLRRLNVSLTRAKRKL 625
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
I VG TLS P + I V E+ +
Sbjct: 626 IAVGDSSTLSNHPTYRRFIEFVRERGTFIE 655
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+KSLN QR AI K L + D+ L+ G GTGKT T+V ++ + RG +L T+ +N AV
Sbjct: 173 DKSLNASQRGAIAKALGSGDFFLVHGPFGTGKTRTLVELIRQEVARGHKVLATAESNVAV 232
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DN++ +L + VRIG V K + + L+ +
Sbjct: 233 DNIVERLADSGLKVVRIGHPSRVSKALHETTLAYL 267
>gi|116328077|ref|YP_797797.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116120821|gb|ABJ78864.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 637
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 216/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q+ A+++ + ++D A+I G PGTGKT+T+ + ++ +L+++ T+SA D
Sbjct: 188 SLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIVAEEKKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKLLNEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L ++
Sbjct: 308 KRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHSVIVSTPVASARSVLEGRR 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P + P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS---EKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G K+S+ P+ ++
Sbjct: 425 RLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRP----GPEKISNFPKTFPF-RD 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L +N ++I I++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L +S +++ TID +QGR+ CI + FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L I + E+
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFIEEK 625
>gi|332159100|ref|YP_004424379.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
gi|331034563|gb|AEC52375.1| dna2-nam7 helicase family protein [Pyrococcus sp. NA2]
Length = 655
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 161/279 (57%), Gaps = 19/279 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L PL +F+L GDH QLPP + S EA+E + +LF L E
Sbjct: 378 YDVAIIDEATQATIPSILIPLNKVERFILAGDHKQLPPTILSLEAQE--LSRTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS----SCSPWL 1186
+P L QYRM + IME + YG R++ DE + I + DL S W
Sbjct: 436 RYPWKSEMLTVQYRMNERIMEFPSKEFYGGRIAA--DE-SVKDITLRDLGILVDSSDMW- 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
E L P ++F++T + + ++ NP+EA ++++I + L++ ++ + IGI
Sbjct: 492 AEILKPENVLVFIDTSKAENKWERQRRGSESRENPLEAKIVSEIVERLLRIGVKKEWIGI 551
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI SL+V VE+ T+D YQGR+K+ I++SFVRS+ + L D
Sbjct: 552 ITPYDDQRDLI--SLNVPEDVEVKTVDGYQGREKEVIILSFVRSN---KAGEIGFLKDLR 606
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NV+LTRA++KLI+VG TLS + LI + E+
Sbjct: 607 RLNVSLTRARRKLIIVGDSSTLSSHETYRRLIEFIKEKG 645
Score = 67.0 bits (162), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K+LN QRRAI K L + D+ LI G GTGKT T+V ++ + RG +L T+ +N AV
Sbjct: 168 DKNLNPSQRRAIGKALGSDDFFLIHGPFGTGKTRTLVELIRQEVKRGNKVLATAESNVAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + VR+G V + + + L+
Sbjct: 228 DNLVERLVDGGLKIVRVGHPSRVSRHLHETTLA 260
>gi|217076667|ref|YP_002334383.1| DNA helicase [Thermosipho africanus TCF52B]
gi|217036520|gb|ACJ75042.1| DNA helicase, putative [Thermosipho africanus TCF52B]
Length = 639
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 152/273 (55%), Gaps = 17/273 (6%)
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+L +FDV ++DEA QTT+P L PL KFVL GDH QLPP + S +A+E + I+L
Sbjct: 370 ILKGFEFDVVVIDEAAQTTIPSVLIPLSKGKKFVLAGDHKQLPPTIISEKAKE--LSITL 427
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L +++P L QYRM + IME N Y +L G I N +K
Sbjct: 428 FEILVDKYPHMKELLNIQYRMNEKIMEFPNKEFYNGKLKSG---IGNITLKDLGFEGSD- 483
Query: 1185 WLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
E P +IF++T + KD + N +EA ++ I ++ +K + + I
Sbjct: 484 ---EITKPENTIIFIDTKSRKNKTENQKKDSTSYFNELEANIVKDIVEKFLKLGLNREYI 540
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
G+ITPY+ Q +LI+ S ++ VE++T+D +QGR+K+ I++SFVRS++ L D
Sbjct: 541 GVITPYDDQVDLIK-SFNL-GVEVNTVDGFQGREKEVIIISFVRSNQRKE---LGFLTDL 595
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NV++TRAK+KLI +G TL P K I
Sbjct: 596 RRLNVSITRAKRKLICIGDSSTLENHPTYKKFI 628
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K+LN Q+ +I K L++K++ LI G GTGKT T+V + + RG +L+++ +N AV
Sbjct: 167 DKNLNYSQKLSISKALSSKNFFLIHGPFGTGKTRTLVEYILQEVKRGKKVLVSADSNMAV 226
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
DNL+ +L S+ + VRIG V K++ L
Sbjct: 227 DNLVERL-SEKVSHVRIGHPSRVSKKLLSSTL 257
>gi|410451573|ref|ZP_11305576.1| AAA domain protein [Leptospira sp. Fiocruz LV3954]
gi|410014617|gb|EKO76746.1| AAA domain protein [Leptospira sp. Fiocruz LV3954]
Length = 634
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 216/459 (47%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G IL+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G +S+ +S P E
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGR--------PMSERTSNFP---E 473
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L ++ L +N+ ++I I++PY
Sbjct: 474 TFPFGNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRLCILLQENDWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ C+L+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|359686101|ref|ZP_09256102.1| DNA and RNA helicase subunit [Leptospira santarosai str. 2000030832]
Length = 634
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 215/459 (46%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G IL+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G +S+ +S P E
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGR--------PMSERTSNFP---E 473
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L ++ L +N ++I I++PY
Sbjct: 474 TFPFGNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRLCILLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|85090568|ref|XP_958479.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
gi|28919845|gb|EAA29243.1| hypothetical protein NCU07395 [Neurospora crassa OR74A]
Length = 716
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 221/477 (46%), Gaps = 90/477 (18%)
Query: 930 FSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+ DP + I W + +LND Q+ AI L +++ ALI G PGTGKT T++ + LL R
Sbjct: 220 LTNDPEVGNIDWVDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLRRD 279
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
IL+ +N +VDN++ +L + +R+G + + H L + S V++
Sbjct: 280 LRILVCGPSNISVDNIVERLSPHKLPILRLGHPARLLPSVLSHSLDILTTTSDAGAIVKD 339
Query: 1044 IKKRLD------------------------------------------QVKVVAVTCLGI 1061
++ +D + KVV T G
Sbjct: 340 VRAEMDAKQASIRKTRNGRERRAIYAELKELRKEYRERERRCVSDLVGRSKVVLATLHGA 399
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS-------TE 1114
L +++FDV I+DEA Q PL++A K VL GDH QLPP ++S T+
Sbjct: 400 GGYQLKNEEFDVVIIDEASQALEAQCWVPLLWAKKAVLAGDHLQLPPTIKSLNSRAATTK 459
Query: 1115 ARENG--MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
++ G +E +LF RL H P L +QYRM + IM + +Y +L ++ +
Sbjct: 460 EKKEGQTLETTLFDRLLTLHGPSIKRMLTTQYRMHEKIMRFPSDELYESKL-VAAEHVRE 518
Query: 1172 AKIKVSDLSSCSPWLKEALN--PCRPVIFVN-------------------TDMLPAYEAK 1210
+K DL P+ N P+IF++ TD +
Sbjct: 519 RLLK--DL----PYEGVEANDDTTEPLIFIDTQGGDFPEKNEEELDGNGSTDKKKVIRSL 572
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTID 1269
++ +N +EA L+ + + L+K + DI ++TPYN+Q +++ +E+ ++D
Sbjct: 573 HGESKSNEMEAALVRQHVRGLIKAGVRPDDIAVVTPYNAQLSILAPLKDEFPGIELGSVD 632
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QGR+K+ ++VS VRS++ LG+ R+NVA+TR K+ L ++G T+ K
Sbjct: 633 GFQGREKEAVIVSLVRSND---EGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 686
>gi|255571556|ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2, putative [Ricinus communis]
Length = 644
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 148/523 (28%), Positives = 240/523 (45%), Gaps = 70/523 (13%)
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLF--LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDP 934
L+ R++K ++ MR L+QL +Q ++ L ++ P V
Sbjct: 131 LNSPLRLEKVANEVTYRRMREALIQLSKGVQRGPAADLVPVLFGERQPTMSKKGV----- 185
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
++ +L+ Q+ AI K L++KD L+ G PGTGKT+T+V + + RGA IL
Sbjct: 186 --TFTPFNSNLDHSQKDAISKALSSKDVFLLHGPPGTGKTTTVVEIILQEVKRGAKILAC 243
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGR-----HEVVHKEIQKHCLSAMNINSVEEIKKRL- 1048
+ +N AVDN++ +L + VR+G +V+ + L N + +I+K +
Sbjct: 244 AASNIAVDNIVERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLKGDNSSLANDIRKEMK 303
Query: 1049 --------------------------------------DQVK---VVAVTCLGITNPLLT 1067
D +K VV T G + L
Sbjct: 304 ALNGKLLKTKDKSTRRDIQKELRTLSKEERKRQQLAVTDVIKNADVVLTTLTGALSHKLD 363
Query: 1068 DKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRR 1127
+ FD+ I+DEA Q L+ S+ +L GDH QLPP +QS EA + G+ +LF R
Sbjct: 364 NTSFDLVIIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFER 423
Query: 1128 LSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
L++ + + S L QYRM + IM S+ +Y ++ A+ +SDL
Sbjct: 424 LADLYGDEVTSMLTVQYRMHELIMTWSSKELYNSKIKAHPSIAAHM---LSDLEGVKR-- 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
A P +I + + + ++ TLN EA + + LV+N ++ DIGIITP
Sbjct: 479 SSATEPTLLLIDIAGCDMEEKKDEEESTLNEG-EADVAVAHAKRLVENGVQASDIGIITP 537
Query: 1247 YNSQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
Y +Q L++ + + VEI T+D +QGR+K+ I++S VRS+ L D
Sbjct: 538 YAAQVVLLKILRSNEDKLKDVEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDRR 594
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
R+NVA+TRA+++ +V T++ LK LI E L+
Sbjct: 595 RMNVAVTRARRQCCLVCDTETVTSDGFLKRLIEYFEEHGEYLS 637
>gi|419759476|ref|ZP_14285775.1| DNA helicase [Thermosipho africanus H17ap60334]
gi|407515486|gb|EKF50231.1| DNA helicase [Thermosipho africanus H17ap60334]
Length = 639
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 152/273 (55%), Gaps = 17/273 (6%)
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+L +FDV ++DEA QTT+P L PL KFVL GDH QLPP + S +A+E + I+L
Sbjct: 370 ILKGFEFDVVVIDEAAQTTIPSVLIPLSKGKKFVLAGDHKQLPPTIISEKAKE--LSITL 427
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L +++P L QYRM + IME N Y +L G I N +K
Sbjct: 428 FEILVDKYPHMKELLNIQYRMNEKIMEFPNIEFYNGKLKSG---IGNITLKDLGFEGSD- 483
Query: 1185 WLKEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
E P +IF++T + KD + N +EA ++ I ++ +K + + I
Sbjct: 484 ---EITKPENTIIFIDTKSRKNKTENQKKDSTSYFNELEANIVKDIVEKFLKLGLNREYI 540
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
G+ITPY+ Q +LI+ S ++ VE++T+D +QGR+K+ I++SFVRS++ L D
Sbjct: 541 GVITPYDDQVDLIK-SFNL-GVEVNTVDGFQGREKEVIIISFVRSNQRKE---LGFLTDL 595
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NV++TRAK+KLI +G TL P K I
Sbjct: 596 RRLNVSITRAKRKLICIGDSSTLENHPTYKKFI 628
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K+LN Q+ +I K L++K++ LI G GTGKT T+V + + RG +L+++ +N AV
Sbjct: 167 DKNLNYSQKLSISKALSSKNFFLIHGPFGTGKTRTLVEYILQEVKRGKKVLVSADSNMAV 226
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL 1033
DNL+ +L S+ + VRIG V K++ L
Sbjct: 227 DNLVERL-SEKVSHVRIGHPSRVSKKLLSSTL 257
>gi|449330036|gb|AGE96301.1| DNA replication helicase [Encephalitozoon cuniculi]
Length = 934
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 191/392 (48%), Gaps = 83/392 (21%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQR A+ L ++Y +I GMPGTGK++ + +K L +LL YTN A+ N+
Sbjct: 623 LNDDQRSALFLSLNCRNYRIIHGMPGTGKSTLICLLIKILAYLKKKVLLICYTNLALANI 682
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
KL I G+ EV K +VEE D++++V TC +P
Sbjct: 683 TKKL--NGIRIYAAGKEEVSFK-------------TVEEAGLFFDRIELVVGTCFSFADP 727
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ +++FD C++DE Q L ++L P+ + KFV+VGDH QL PL +S++ + +SL
Sbjct: 728 IYVNRQFDFCVIDEGSQMHLLLTLIPVSISKKFVIVGDHLQLKPLSRSSK----DLSLSL 783
Query: 1125 FRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
F L E+H S L++QYRM IM LSN L YG +L + K S
Sbjct: 784 FEHLLGEDH----SKLRTQYRMGSEIMRLSNTLFYGHQL--------RGEKKPS------ 825
Query: 1184 PWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
V F++T E D +L + E C I
Sbjct: 826 -----------TVQFIDT------EGIDFMSLVSSFEKC-------------------TI 849
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ +N+Q LIR +S + T+D++QG + D ++V F S+ ++ R
Sbjct: 850 LCYFNAQVGLIREK---TSCAVETVDRFQGSEDDKVVVVFDPVSK------CEVMESNER 900
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+NVALTRA+K L++VGS + ++ +LK L++
Sbjct: 901 LNVALTRARKHLVLVGSRSKMMEIEILKRLMS 932
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 109/246 (44%), Gaps = 45/246 (18%)
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---KCSERSISALLGTLLHQIFQAGLMK 499
N+L+V D ++ T + S +C R ++ R+ K S I L+G ++H + + L++
Sbjct: 173 NYLLVEDDP-IAITTLCESLTCRNRHYVNSRIASIKFSHTDIRILVGVIVHSVMEKALIQ 231
Query: 500 EIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP 559
+ + FL A+ + +N+ ++ CGV+E + + K++ I LF++ +
Sbjct: 232 KSFALDFLIGQAKREISRNVILMHRCGVDE----RVALNETLKLIKNIYLFREQR----- 282
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
+V + E+ + + +KG DA G LE K
Sbjct: 283 --------------FDVVETEKRLMSLLFNIKGNADAV-------------GTDTVLEIK 315
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
+ + EHRAQV+LY L++ E+ + LYY+ + + V ++ ++ L+
Sbjct: 316 STR----SRRAEHRAQVMLYALMLKEKTGRDF-LPYLYYIPARELVEVKLKHQEIRSLLN 370
Query: 680 RRNEFA 685
RN A
Sbjct: 371 LRNRIA 376
>gi|114145750|ref|NP_001041463.1| zinc finger protein 2 [Ciona intestinalis]
gi|93003124|tpd|FAA00145.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 1048
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 162/589 (27%), Positives = 276/589 (46%), Gaps = 95/589 (16%)
Query: 824 LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRI 883
++GD V + + SG+++ S H+SV+F G DSL H +
Sbjct: 78 FKTGDIVGIDQVQSETS-GSGIVSHTSDKHISVAFE------GSEMRDTLDSLAHNRNSV 130
Query: 884 DKDEIM--TSFSVMRYNLVQLFLQSAQSSQ--LRRMIVDLEAPRFDSGSVFSQDPALSYI 939
++ ++ ++ L L S SQ + + D + +F+ L+++
Sbjct: 131 ALIKLANEVTYKRLKRALEDLKKYSDGPSQHLIEVLFGDTKPQQFNL-------QELTFV 183
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
++LN+ Q A+ L+ + A+I G PGTGKT+T+V + L+ G +L + +N
Sbjct: 184 --NQNLNECQHNAVKFALSQSELAIIHGPPGTGKTTTVVEVIAQLVKAGRKVLACAPSNV 241
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVV---------HKEIQKHCLSAM-------------- 1036
AVDNL+ KL S S+D V G+ +V KE+++ L A+
Sbjct: 242 AVDNLVEKLSSISVDKVSGGKMSIVRLGHPARMLEKEVKQLSLDALVSSSDAAAIVRDVR 301
Query: 1037 -NINSVE------------------------EIKKR--------LDQVKVVAVTCLGI-- 1061
+I +V+ E+K+R L V+ T +G
Sbjct: 302 SDIEAVQKSLSRCPDKGKRFSLRQERKLLFSELKQRENKALNEILSSADVILATNVGAHA 361
Query: 1062 TNPL--LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
PL L FD I+DE GQ+ L+ A + +L GDH QLPP + S +A NG
Sbjct: 362 KGPLQHLPHDYFDDVIIDECGQSLEAACWISLLRARRCILAGDHLQLPPTIISHKAAANG 421
Query: 1120 MEISLFRRL-SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
+ +L R+ + + +S L QYRM + IM ++ +Y +L+ AN K++
Sbjct: 422 LATTLLERMINLQGDSVVSMLTEQYRMHRDIMHWASKKMYDGKLT------ANCKVQCHL 475
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEI 1236
LS P + + P++ V+T YE++ ++++ N EA ++ Q LVK +
Sbjct: 476 LSDM-PGVDNTEDTRLPLLLVDTAGCEMYESESEESISKANTGEAMIVCSHVQTLVKAGV 534
Query: 1237 EGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
+ DI II+PYN Q +L+R SL ++EI ++D +QGR+K+ ++++ VRS+ +
Sbjct: 535 KESDIAIISPYNLQVDLLRQSLKEKHPNIEIKSVDGFQGREKEAVILTLVRSNLDRE--- 591
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
L D R+NVA+TRA++ L +V T+ +K LI+ + E I
Sbjct: 592 IGFLSDKRRLNVAVTRARRHLAVVCDSTTVCSDNFIKSLIDHITEHGDI 640
>gi|145505511|ref|XP_001438722.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405894|emb|CAK71325.1| unnamed protein product [Paramecium tetraurelia]
Length = 743
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 221/454 (48%), Gaps = 88/454 (19%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVK-ALLMRGASILLTSYTNSAV 1001
K LND Q+ A+ K + +LI G PGTGKT T+ +K A+L++ IL + +N AV
Sbjct: 214 KQLNDQQKIAVQKAMNQPHISLIHGPPGTGKTRTVCEYIKQAVLVQRHKILACANSNIAV 273
Query: 1002 DNLLIKLKSQS-IDFVRIGRHEVVHKEIQKHCLSAM---------------NINSVE--- 1042
DN++ ++++ S + RIG + +++ C+ + I +E
Sbjct: 274 DNMIERIQNISQLKVCRIGNPARMTDQVRYVCIDQLVKKTTSYAIMKTIKTEIQQIEKKL 333
Query: 1043 ---------EIKKRLDQVK-------------------VVAVTCLGITN----PLLTDKK 1070
E++ +L Q K V+ T +G L + K
Sbjct: 334 NRAERREAAELRDKLKQKKKEYFEQQQLAYEEAIQDCQVIFSTNVGSGQFQFQQLTKNIK 393
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DE Q+ P++ +K VL GDH QLPP V++ + G+E++LF R+
Sbjct: 394 FDVVVIDECAQSLEISCWIPILKGNKVVLAGDHCQLPPTVKT---KNTGLEMTLFERVEN 450
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
E I L QYRM + IM+ S+ Y L V+D + + + + +
Sbjct: 451 ELHVNI-LLTVQYRMNKSIMQWSSQEFYDGHL-------------VADQTVANRTVSDTI 496
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLN---------NPVEACLIAKITQELVKNEIEGKDI 1241
++FV+T YE + L N EA L+ I++EL+ ++ +DI
Sbjct: 497 -----LLFVDTSCCDFYEQQQESLLYFDDQNKSKYNVGEAGLVQIISEELINLGVQKQDI 551
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
GIITPYN+Q L++ ++ +EI T+D +QGR+KDCI++S VRS++ L +
Sbjct: 552 GIITPYNAQVQLLKSK--INDIEISTVDGFQGREKDCIIISMVRSNQMGE---VGFLCES 606
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R+NVA+TRAKK + ++G T+S LK LI+
Sbjct: 607 RRMNVAVTRAKKFVCLIGDSETVSNDAFLKRLID 640
>gi|170288736|ref|YP_001738974.1| DNA helicase [Thermotoga sp. RQ2]
gi|170176239|gb|ACB09291.1| DNA helicase [Thermotoga sp. RQ2]
Length = 650
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 157/274 (57%), Gaps = 16/274 (5%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ KFVL GDH QLPP + S +A++ + +LF L
Sbjct: 377 FDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKD--LSRTLFEELIT 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP----WL 1186
+P+ S L +QYRM + +M + Y +L ++E+ N I + DL P +
Sbjct: 435 RYPEKSSLLDTQYRMNELLMAFPSEEFYDGKLKA-AEEVRN--ITLFDLGVEIPNFGKFW 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L+P ++F++T + KD + NP+EA ++ ++ ++L+ ++ IGI
Sbjct: 492 DVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGI 551
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q NLIR L + VE+H++D +QGR+K+ I++SFVRS+ +N L D R
Sbjct: 552 ITPYDDQVNLIRE-LIEAKVEVHSVDGFQGREKEVIIISFVRSN---KNGEIGFLEDLRR 607
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+NV+LTRAK+KLI G TLS P + + V
Sbjct: 608 LNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ + RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|284038257|ref|YP_003388187.1| ATPase AAA [Spirosoma linguale DSM 74]
gi|283817550|gb|ADB39388.1| AAA ATPase [Spirosoma linguale DSM 74]
Length = 632
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 211/454 (46%), Gaps = 89/454 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K+LTA + A++ G PGTGKT+T+V A+KAL + +L+ + +N+AVD
Sbjct: 178 LNPSQVAAVGKILTANELAIVHGPPGTGKTTTLVQAIKALHKQDNKKLLVVAPSNTAVDL 237
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNINSVEEIK 1045
L KL + + +R+G H+V KE +K A ++
Sbjct: 238 LSEKLHDEGLSVLRVGNPARVSERLMALTLDHKVADHPAMKEARKLKKQANEFKNMAHKY 297
Query: 1046 KR-----------------------------------LDQVKVVAVTCLGITNPLLTDKK 1070
KR + + +V+ T +G + + +
Sbjct: 298 KRNFGKAERDQRKALFDEAHRIMKEVGNTEQYVIDDLVGKAQVITATLVGANHYTVRNLT 357
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+ ++DEAGQ P P++ A K VL GDH QL P ++S EA G+ +L + +
Sbjct: 358 YHTVVIDEAGQALEPACWIPILKAQKVVLAGDHCQLSPTIKSAEAARKGLSHTLLEKCIK 417
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSC-GSDEIANAKIKVSDLSSCSPWLKEA 1189
HP+A+S L QYRM + IM S+ + Y ++L GS +A + SD +
Sbjct: 418 LHPEAVSLLDEQYRMHEHIMGYSSQVFYKNKLKAHGS--VARHSLFDSDTA--------- 466
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN------EIEGKDIGI 1243
++FV+T E D + NP EA L+ K +LV + + I I
Sbjct: 467 ------LVFVDTAGCGFDEKLDGTSSTNPEEAALLMKHLTQLVTDLSTRYTKENFPTIAI 520
Query: 1244 ITPYNSQANLIRHSL--------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I+PY Q N+++ L + ++TID +QG+++D + +S RS+
Sbjct: 521 ISPYKQQINVLKDQLLHTPELQPYSDRISVNTIDSFQGQERDIVYISMTRSNA---EGEI 577
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
L D R+NVA+TRA+KKL++VG TL+ +P
Sbjct: 578 GFLSDIRRMNVAMTRARKKLVIVGDSATLAGLPF 611
>gi|440634913|gb|ELR04832.1| DNA helicase [Geomyces destructans 20631-21]
Length = 674
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 212/459 (46%), Gaps = 81/459 (17%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W + SLND Q+ AI L +++ ALI G PGTGKT T++ + L+ +L+ +N
Sbjct: 196 WIDTSLNDSQKDAIKFALASREVALIHGPPGTGKTHTLIELILQLVKLKLRVLVCGPSNI 255
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L + +R+G + + H L + S V +++K +D
Sbjct: 256 SVDNIVERLSPHKLPILRLGHPARLLPSVLNHSLDILTQTSDAAAIVRDVRKEMDSKQAS 315
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L ++FD
Sbjct: 316 LRKTKSGRERRGIYGELRELRKEFREREKKCVANLVMGSKVVLATLHGAGGFQLRGEQFD 375
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPL-------VQSTEARENGM--EIS 1123
V ++DEA Q PL+ A K VL GDH QLPP V+S E GM E +
Sbjct: 376 VVLIDEASQALEAQCWVPLLQADKVVLAGDHLQLPPTIKSLNSKVKSKEVIIKGMTLETT 435
Query: 1124 LFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
LF RL H + I L +QYRM + IM + +Y +L IA +K L+
Sbjct: 436 LFDRLLAMHGEGIKRMLTTQYRMHETIMRFPSDELYEGKL------IAAEAVKARLLTDL 489
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL-------------NNPVEACLIAKITQ 1229
+++ + P++F +T EA + + + +N +EA L+ +
Sbjct: 490 PYEVQDTEDTREPLVFWDTQGGDFPEASEEEGVSKKAGKGLMGESKSNEMEAVLVKLHVK 549
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
LVK ++ +DI ++TPYN+Q L+ L +E+ ++D +QGR+K+ I+VS VRS+
Sbjct: 550 NLVKAGVKPEDIAVVTPYNAQLALMSGPLKEEFPGIELGSVDGFQGREKEAIIVSLVRSN 609
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ LG+ R+NVA+TR ++ L ++G T++K
Sbjct: 610 G---DGEVGFLGEKRRLNVAMTRPRRHLCVIGDAETVAK 645
>gi|147846685|emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
Length = 649
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 219/446 (49%), Gaps = 67/446 (15%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+L+ Q+ I K L++K+ L+ G PGTGKT+T+V + + RGA IL + +N AVDN
Sbjct: 198 NLDRSQKDXISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGAKILACAASNIAVDN 257
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
++ +L + VR+G R E+ K + L
Sbjct: 258 IVERLVPYRVKLVRLGHPARLLPQVLESALDAQVLRGDNTGLANDIRKEM--KALNGKLL 315
Query: 1034 SAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFDVC 1074
+ N+ +I+K L D +K VV T G + L + FD+
Sbjct: 316 KTKDKNTRRDIRKELKTLSKEERKRQQLAVTDVIKNANVVLTTLTGAVSRKLENISFDLV 375
Query: 1075 IMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH-P 1133
I+DEA Q L+ S+ +L GDH QLPP +QS EA + G+ +LF RL++ +
Sbjct: 376 IIDEAAQALEIACWIALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGD 435
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+ +S L QYRM + IM S+ +Y +++ A+ +SDL +K++ +
Sbjct: 436 EVMSMLTVQYRMHELIMNWSSKELYNSKITAHPSVAAHM---LSDLED----VKKSSSTE 488
Query: 1194 RPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
++ ++T E KD + + N EA + + LV + ++ DIGIITPY +Q
Sbjct: 489 STLLLIDTAGCDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVV 548
Query: 1253 LIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
L++ + + +EI T+D +QGR+K+ I++S RS NP+ L D R+NVA+
Sbjct: 549 LLKMMKNNDDKLKDMEISTVDGFQGREKEAIIISMARS--NPKK-EVGFLSDRRRMNVAV 605
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLI 1334
TRA+++ +V T++ LK LI
Sbjct: 606 TRARRQCCLVCDTETVTSDKFLKRLI 631
>gi|418747088|ref|ZP_13303398.1| AAA domain protein [Leptospira santarosai str. CBC379]
gi|418755612|ref|ZP_13311809.1| AAA domain protein [Leptospira santarosai str. MOR084]
gi|409964074|gb|EKO31973.1| AAA domain protein [Leptospira santarosai str. MOR084]
gi|410791882|gb|EKR89827.1| AAA domain protein [Leptospira santarosai str. CBC379]
Length = 634
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G +L+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G +S+ +S P E
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGR--------PMSERTSNFP---E 473
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L ++ L +N ++I I++PY
Sbjct: 474 TFPFGNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRLCILLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|348505663|ref|XP_003440380.1| PREDICTED: DNA-binding protein SMUBP-2 [Oreochromis niloticus]
Length = 995
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/449 (29%), Positives = 216/449 (48%), Gaps = 64/449 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L+D QR A+ L+ ++ A+I G PGTGKT+T+V + + G +L + +N AVDNL
Sbjct: 190 LDDSQREAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKHGQKVLCCAPSNVAVDNL 249
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-------- 1051
+ +L +R+G + + IQKH L A+ N N + EI+K +D+
Sbjct: 250 VERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIAEIRKDIDKAFTGMKKEK 309
Query: 1052 --------------------------------KVVAVTCLGITN--PL--LTDKKFDVCI 1075
VV T G + PL L + FD +
Sbjct: 310 GERGNLKREIGELRKELKNRETAAIAQILKSADVVLSTNTGACDDGPLKFLPAEHFDWVV 369
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DE Q L+ A K +L GD+ QLPP ++S A G+ +SL RL + + +
Sbjct: 370 IDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQMAASKGLSLSLMERLIQMYGDS 429
Query: 1136 -ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR 1194
+ L QYRM IM+ ++ +Y RL+ S + + DL+ + ++E
Sbjct: 430 VVRMLTVQYRMNSAIMQWASKEMYQGRLTAHSSVEGHL---LKDLAGVA-CVEET---ST 482
Query: 1195 PVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
P++ ++T L E D Q+ N E ++ + L + ++ KDI +I PYN Q +
Sbjct: 483 PLLLIDTAGCGLSEMEVADEQSKGNTGEVDIVDLHIKALTEAGVKAKDIAVIAPYNLQVD 542
Query: 1253 LIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
L+R LS +EI ++D +QGR+K+ +++S VRS+ R L + RINVA+TR
Sbjct: 543 LLRQKLSAKHPELEIKSVDGFQGREKEAVVLSLVRSN---RKGEVGFLAEDRRINVAVTR 599
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
A++ + +V +T+ LK LI+ + E
Sbjct: 600 ARRHIAVVCDTQTVQNHGFLKSLIDHMTE 628
>gi|421110188|ref|ZP_15570689.1| AAA domain protein [Leptospira santarosai str. JET]
gi|410804373|gb|EKS10490.1| AAA domain protein [Leptospira santarosai str. JET]
Length = 634
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 215/459 (46%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G IL+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G +S+ +S P E
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGR--------PMSERTSNFP---E 473
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L ++ L +N ++I I++PY
Sbjct: 474 TFPFGNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRLCILLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ C+L+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|345884981|ref|ZP_08836376.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
gi|345042227|gb|EGW46333.1| hypothetical protein HMPREF0666_02552 [Prevotella sp. C561]
Length = 656
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 219/461 (47%), Gaps = 79/461 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +VL AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 196 LNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 255
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH-----------CLSAMNIN---SV 1041
KL + I+ +RIG V+ ++ + H + + N
Sbjct: 256 CEKLVDRGINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNNRKKGS 315
Query: 1042 EEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
E +++D++K VVA T +G + ++ +KF +DEA Q
Sbjct: 316 ESYHQKMDRLKSRATELEIRINAELFGEARVVASTLVGANSRIMEGQKFTTLFIDEAAQA 375
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+ AS+ + GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 376 LEAACWIAIRRASRIIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVENKPEVVTLLKVQ 435
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--------------------SDE--IANAKIKVSDLS 1180
YRM + IM S+ YG ++ SDE +A+ + S+ +
Sbjct: 436 YRMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVASYDLTESEAN 495
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
S L FV + + + TL V+ KI ++ V + E D
Sbjct: 496 SVPSQLSNDKENAFHEQFVGSSFGRINKGEAELTLKTLVD--YFTKIGKQRVLD--ERID 551
Query: 1241 IGIITPYNSQANLIRHSLSV--------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+G+I+PY +Q +R + S + ++T+D +QG+++D IL+S VRS+++ +
Sbjct: 552 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQ- 610
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
L D R+NVA+TRA+ KLI++G+ +T++K K L
Sbjct: 611 --IGFLRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKL 649
>gi|281412067|ref|YP_003346146.1| DNA helicase [Thermotoga naphthophila RKU-10]
gi|281373170|gb|ADA66732.1| DNA helicase [Thermotoga naphthophila RKU-10]
Length = 650
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 156/274 (56%), Gaps = 16/274 (5%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ KFVL GDH QLPP + S +A++ + +LF L
Sbjct: 377 FDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKD--LSRTLFEELIT 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP----WL 1186
+P+ S L +QYRM + +M + Y +L ++E+ N I + DL P +
Sbjct: 435 RYPEKSSLLDTQYRMNELLMAFPSEEFYDGKLKA-AEEVRN--ITLFDLGVEIPNFGKFW 491
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
L+P ++F++T + KD + NP+EA ++ ++ ++L+ ++ IGI
Sbjct: 492 DVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKENWIGI 551
Query: 1244 ITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
ITPY+ Q NLIR L VE+H++D +QGR+K+ I++SFVRS+ +N L D R
Sbjct: 552 ITPYDDQVNLIRE-LIEEKVEVHSVDGFQGREKEVIIISFVRSN---KNGEIGFLEDLRR 607
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
+NV+LTRAK+KLI G TLS P + + V
Sbjct: 608 LNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFV 641
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++ LN+ QR A+ L + D+ LI G GTGKT T+V ++ + RG IL+T+ +N AV
Sbjct: 168 DEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAV 227
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L + + VRIG V +++ L+
Sbjct: 228 DNLVERLWGK-VSLVRIGHPSRVSSHLKESTLA 259
>gi|239049136|ref|NP_001155054.1| immunoglobulin mu binding protein 2 [Nasonia vitripennis]
Length = 905
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 142/475 (29%), Positives = 224/475 (47%), Gaps = 75/475 (15%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
D GS+ +P L+ DQ+ A+ L + +A+I G PGTGKT+T++ + L
Sbjct: 188 DQGSINFYNPNLA---------KDQKSAVEFALKRRYFAIIQGPPGTGKTTTLIEIIVQL 238
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-------- 1036
G +L+ + TN AVDNL+I+L +R+G + KE K+ L +
Sbjct: 239 QKFGKKVLICAPTNVAVDNLVIRLGQTEAKPLRLGHPTRIAKEALKYSLDSYLERDDGFI 298
Query: 1037 -------NINSVE--------------------EIKKRL-----DQVKVVAVTCLGITNP 1064
+I +E E +KRL D +K +V + +
Sbjct: 299 ILKDIKKSIKDLETNIGNSGTKYAYKEVRELKKEYRKRLIRLTCDTLKKCSVILCTLNSA 358
Query: 1065 LLTDKK--------FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
D + FDV I+DEA Q + + A K +L GD QLPP+V EA
Sbjct: 359 SANDGQLQYIPRDHFDVLIVDEASQAMEASTWIAIPNAPKLILAGDINQLPPVVMCQEAT 418
Query: 1117 ENGMEISLFRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK 1175
+ G+ ISL R + + + L QYRM + IM S+ Y D L D + N +K
Sbjct: 419 KGGLNISLMERAIKKLNTDCYVRLMRQYRMNEKIMTWSSKKFYDDTLE-ADDLVKNHLLK 477
Query: 1176 VSDLSSCSPWLKEALN-PCRPVIFVNTDMLPAYE---AKDHQTLNNPVEACLIAKITQEL 1231
P +K+ + V++++T E + + N EA ++ K+ L
Sbjct: 478 ------HLPSVKQEDDLTSEAVVYIDTCGCECEEFNTGVEKASKGNLGEAVIVDKVVTNL 531
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKDCILVSFVRSSEN 1289
VK + KDIG ITPY Q + IR S + S VE+ T+D +QGR+K+ I++S VRS+E+
Sbjct: 532 VKVGLYHKDIGAITPYALQVDFIRRSFAAKSLNVEVSTVDGFQGREKEVIILSLVRSNED 591
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
+ D+ R+NVA+TRA++ LI++ T+ K L+ L+ + E +G+L
Sbjct: 592 KE---LGFVTDFRRLNVAVTRARRSLIVIADSETMEKDDLIVSLLKHI-EDNGLL 642
>gi|359726451|ref|ZP_09265147.1| DNA and RNA helicase subunit [Leptospira weilii str. 2006001855]
Length = 637
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 215/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+ QR+A IK + ++D +I G PGTGKT+T+ + L+ G IL+++ T+SA D
Sbjct: 188 NLNESQRKAAIKAVLSEDVTIIHGPPGTGKTTTLTEIISQLVAEGKRILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESVSTRGIPVLRLGHPARISDAALHATLDYKLFHHPDGKLLSEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ VV T + +L ++
Sbjct: 308 KRNFGEKEKEERKNLFQEVKELKKTIRSMEKGLIDSLVSFHPVVVSTPVASARSVLEGRQ 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P P++ + + +L GDH QLPP S + +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPP---SLFSEKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G ++S+ P+
Sbjct: 425 RLETSGRVFLLDTQYRMKDEISFFPSMEFYSNRLKSGRP----GPERISNFPETFPF-GN 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L +N ++I +++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLRENNWSEEEITVLSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLISEKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L LI V ++
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFVEDK 625
>gi|145348783|ref|XP_001418823.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579053|gb|ABO97116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 609
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 221/461 (47%), Gaps = 81/461 (17%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W +L+ QR AI L D+ALI G PGTGKT+ +V V + RG+ +L + +N
Sbjct: 151 WINTALDASQRGAIEHALRCVDFALIHGPPGTGKTTAVVEYVAQEVARGSRVLACTASNI 210
Query: 1000 AVDNL---LIKLK---SQSIDFVRIGRHEVV-----------------HKEIQKHCLSAM 1036
A+DNL L+K+K + VR+G + + ++ K C
Sbjct: 211 AIDNLVERLMKIKLPEGGEMRLVRVGHPARLLPSVLAASLEAQLLASDNSKLAKDCAKES 270
Query: 1037 NI------------NSVE--EIKKRL-------------------DQVKVVAVTCLGITN 1063
I + VE E++K L D +VV T G +
Sbjct: 271 KILRRKLLKLNDRKDRVERNEVRKELRVLAKEERNRQKAAMRDVVDGARVVCSTLSGALS 330
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
L + FDV ++DEA Q G ++ K VL GDH QLPP V S EA+ G+ +
Sbjct: 331 GTLKFQDFDVVVIDEAAQALEAACWGAVLKGKKTVLAGDHLQLPPTVISDEAQAKGLSDT 390
Query: 1124 LFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
LF+RL + + ++ L QYRM IM S+ +Y +L+ ++ +A +++ D
Sbjct: 391 LFQRLHDMYGDLVARMLTVQYRMHADIMTWSSEAMYQGKLTA-AESVATHRLR-GDGEDD 448
Query: 1183 SPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIAKITQELV-KNEIEG 1238
P L + ++T DM E +D ++ NP EA ++ ++ + LV ++++
Sbjct: 449 PPVL----------LLIDTAGCDMDERVE-EDGESKENPDEAAVVMEVVRRLVARHDVAV 497
Query: 1239 KDIGIITPYNSQANLIRH----SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
DIG+ITPYN Q ++R ++ ++E+ T+D +QGR+K+ I++S VRS+ +
Sbjct: 498 DDIGVITPYNGQVTVLRELRARDDALKNLEVSTVDGFQGREKEAIIISAVRSNASGE--- 554
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L D R+NVA+TRA+K ++ T+S L L+
Sbjct: 555 VGFLSDSRRMNVAVTRARKHCCLIIDSDTVSSDRFLATLVE 595
>gi|319789787|ref|YP_004151420.1| DNA helicase [Thermovibrio ammonificans HB-1]
gi|317114289|gb|ADU96779.1| DNA helicase [Thermovibrio ammonificans HB-1]
Length = 720
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 171/307 (55%), Gaps = 22/307 (7%)
Query: 1027 EIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPV 1086
+++ L M + EI + VV T + + LL FD ++DE Q P
Sbjct: 407 DVRIKALKEMETHIFREI---IADADVVISTNSMVKSELLEGFHFDSAVIDEGSQQVEPS 463
Query: 1087 SLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
+L P+ A++F + GDH QLPP V S EA+E +E +LF RL H + S L+ QYRM
Sbjct: 464 TLIPIARANRFFIAGDHKQLPPTVASEEAKE--LERTLFERLISTHGELSSMLRVQYRMN 521
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIK---VSDLSSCSPW-LKEALNPCRPVIFVNTD 1202
+ IME N Y +L +A ++K ++D + +P K+ L+P P+ F++T
Sbjct: 522 EKIMEFPNREFYEGKL------VAAPEVKERTLADFNLEAPRKFKKVLDPSVPLGFIDTS 575
Query: 1203 MLPAYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV 1260
+ AYE + + N EA + ++ EL + ++ ++IGIITPY +Q LI+ L+
Sbjct: 576 SINAYEFQPEGSTSYENYEEAKIAVEVALELHRMGLDRREIGIITPYAAQVKLIKQLLAE 635
Query: 1261 SS--VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
VE++++D +QGR+K+ I+VSFVRS++ L D R+NVA+TR ++KL+ +
Sbjct: 636 REFKVEVNSVDGFQGREKEAIIVSFVRSND---EGEIGFLKDLRRLNVAITRPRRKLVAI 692
Query: 1319 GSCRTLS 1325
G+ +TLS
Sbjct: 693 GNTKTLS 699
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 19/220 (8%)
Query: 818 KDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL 877
K ++ + +GD V++S + + G + I+ V+V+F R P + +
Sbjct: 131 KPIETEITTGDIVLVSKGNPLKSDLLGTVVRITEKTVTVAFDN--RPP--------NWVY 180
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
RID +F M NL +L S + +LR ++ L P F++ P
Sbjct: 181 KRGVRIDLYVNDVTFKRMEENLEELRHASGRQRELRNTVIGLREPEH-----FTEIP--- 232
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ + LN+ QR A+ + L + D+ LI G PGTGKTST+ + L+ RG ++ T+ +
Sbjct: 233 FEPVDSRLNETQRLAVSRALGSPDFFLIHGPPGTGKTSTITELIVQLVKRGEKVIATADS 292
Query: 998 NSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
N A DN+L+ L K + VRIG V +E+++ + A+
Sbjct: 293 NIAADNILLNLSKYPDLKLVRIGHPARVLEELERFSIYAL 332
>gi|432861602|ref|XP_004069646.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Oryzias latipes]
Length = 987
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 218/452 (48%), Gaps = 70/452 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L+D QR A++ L+ ++ A+I G PGTGKT+T+V + + +G +L + +N AVDNL
Sbjct: 188 LDDSQREAVMFALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCAPSNVAVDNL 247
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV-------- 1051
+ +L +R+G + + IQKH L A+ N N + +I+K +D+V
Sbjct: 248 VERLAQCKAKVLRLGHPARLLESIQKHSLDAILAQSDNANIIADIRKDIDKVLMGMKKEK 307
Query: 1052 --------------------------------KVVAVTCLGITN----PLLTDKKFDVCI 1075
VV T G + LL + FD +
Sbjct: 308 GERGNYKREIGELKKELKSREATAITQILKGADVVLSTNTGACDDGPLKLLPAEHFDWVV 367
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ- 1134
+DE Q L+ A K +L GD+ QLPP ++S A G+ +SL R+ + +
Sbjct: 368 IDECAQALESSCWIALLKARKCILAGDYKQLPPTIKSQAAASKGLSLSLMERVIQIYGDV 427
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIK---VSDLSSCSPWLKEALN 1191
+ L QYRM IME ++ +Y +L+ A+ ++ + DL+ + + +
Sbjct: 428 VVRMLTVQYRMNSAIMEWASKEMYQGKLT------AHCSVESHLLKDLTGVASVAETST- 480
Query: 1192 PCRPVIFVNT--DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
P++ ++T L E D Q+ N E ++ + L + ++ KDI +I PYN
Sbjct: 481 ---PLLLIDTAGSGLTEMEVTDEQSKGNQGEVDIVELHIKALTEAGVKAKDIAVIAPYNL 537
Query: 1250 QANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
Q +L+R LS +EI ++D +QGR+K+ +++S VRS+ R L + RINVA
Sbjct: 538 QVDLLRQRLSARHPELEIKSVDGFQGREKEAVVLSLVRSN---RKGEVGFLSEDRRINVA 594
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGE 1339
+TRA++ + +V +T+ LK L++ + E
Sbjct: 595 VTRARRHIAVVCDTQTVQNHAFLKSLVDHMTE 626
>gi|240102675|ref|YP_002958984.1| UvrD type DNA helicase [Thermococcus gammatolerans EJ3]
gi|239910229|gb|ACS33120.1| DNA helicase, putative [Thermococcus gammatolerans EJ3]
Length = 660
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 157/275 (57%), Gaps = 18/275 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q T+P L P+ A +FVL GDH QLPP + S A+E + +LF L E
Sbjct: 382 YDVAIIDEATQATIPSVLIPINRARRFVLAGDHKQLPPTILSERAKE--LSKTLFEGLIE 439
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-----W 1185
+P L QYRM + +ME + Y R+ + + N I ++DL P W
Sbjct: 440 RYPWKSEMLTVQYRMNERLMEFPSREFYNGRIKA-DESVRN--ITLADLGVELPKGDDVW 496
Query: 1186 LKEALNPCRPVIFVNTDMLP-AYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
E L P ++FV+T +E + + ++ NP+EA L+ + + L+K I+ + +G
Sbjct: 497 -AEVLKPENVLVFVDTAKREDRFERQRYGSESRENPLEARLVEEAVEGLLKLGIKPEWVG 555
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+ITPY+ Q +LI SL +E+ T+D YQGR+K+ I++SFVRS+ R L D
Sbjct: 556 VITPYDDQRDLI-SSLLPEEIEVKTVDGYQGREKEVIVLSFVRSN---RKGELGFLKDLR 611
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NV+LTRAK+KLI++G TLS P K L+ V
Sbjct: 612 RLNVSLTRAKRKLILIGDSSTLSSHPTYKRLVEFV 646
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
++SLN QRRAI + L + D+ LI G GTGKT T+V ++ + RG +L T+ +N AV
Sbjct: 172 DRSLNASQRRAIARALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGHRVLATAESNVAV 231
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DN++ +L + VR+G V K + + L+ +
Sbjct: 232 DNIVERLVDSGLKVVRVGHPSRVSKALHETTLAYL 266
>gi|456876620|gb|EMF91699.1| AAA domain protein [Leptospira santarosai str. ST188]
Length = 634
Score = 167 bits (424), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 214/459 (46%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G IL+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G +S+ +S P E
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGR--------PMSERTSNFP---E 473
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L + L +N ++I I++PY
Sbjct: 474 TFPFGNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRFCILLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ C+L+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCVLLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|223478666|ref|YP_002583052.1| DNA helicase [Thermococcus sp. AM4]
gi|214033892|gb|EEB74718.1| DNA helicase [Thermococcus sp. AM4]
Length = 660
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 159/278 (57%), Gaps = 18/278 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV ++DEA Q T+P L P+ A +FVL GDH QLPP + S +A+E + +LF L E
Sbjct: 382 YDVAVIDEATQATIPSVLIPINRARRFVLAGDHRQLPPTILSEKAKE--LSKTLFEGLIE 439
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP-----W 1185
+P L QYRM + +ME + Y R+ DE I ++DL SP W
Sbjct: 440 RYPGKSEMLTVQYRMNERLMEFPSREFYDGRIEA--DESVRG-ITLADLGVKSPEEGDAW 496
Query: 1186 LKEALNPCRPVIFVNT-DMLPAYEAKDH--QTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
K L P ++F++T +E + + ++ NP+EA L+ + + L+ ++ + IG
Sbjct: 497 AK-VLKPENVLVFIDTAGREDRFERQRYGSESRENPLEARLVKEAVEGLLSLGVKPEWIG 555
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+I+PY+ Q +LI SL +E+ T+D YQGR+K+ I++SFVRS+ R L D
Sbjct: 556 VISPYDDQRDLI-SSLLPEEIEVKTVDGYQGREKEVIVLSFVRSN---RKGELGFLKDLR 611
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
R+NV+LTRAK+KLI++G TLS P K L+ V E+
Sbjct: 612 RLNVSLTRAKRKLILIGDSSTLSSHPTYKRLVEFVRER 649
Score = 71.6 bits (174), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 58/95 (61%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+KSLN QRRAI K L + D+ LI G GTGKT T+V ++ + RG +L T+ +N AV
Sbjct: 172 DKSLNASQRRAIAKALGSPDFFLIHGPFGTGKTRTLVELIRQEVARGHRVLATAESNVAV 231
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
DNL+ +L + VR+G V K++ + L+ +
Sbjct: 232 DNLVERLVDSGLKVVRVGHPSRVSKKLHETTLAYL 266
>gi|167764772|ref|ZP_02436893.1| hypothetical protein BACSTE_03163 [Bacteroides stercoris ATCC 43183]
gi|167697441|gb|EDS14020.1| putative DNA helicase [Bacteroides stercoris ATCC 43183]
Length = 631
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 208/455 (45%), Gaps = 81/455 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D A++ G PGTGKT+T+V A+ L R +L+ + +N AVD +
Sbjct: 190 LNSTQESAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWI 249
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKHCL------------------SAMN 1037
KL + ++ +RIG V+ + + H L +
Sbjct: 250 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFENHPLYPELWSIRKELRLLGGKSRRGS 309
Query: 1038 INSVEEIKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ E I+ R+ D V+A T + + LL ++F +DE
Sbjct: 310 YDEREGIRNRMSRLRDRATTLEIQINSELFDSAHVIASTLVSSNHRLLNGRRFGTLFIDE 369
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + VL GDH QLPP ++ EA G+E +L ++ P A+S
Sbjct: 370 AAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVAGKPSAVSL 429
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ YG L + EI + I L+ PV +
Sbjct: 430 LKVQYRMHEDIMRFSSDWFYGGELEA-APEIRHRGI---------------LDWDTPVTW 473
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACLIAK----ITQELVKNEI--EGKDIGIITPYNSQ 1250
++T + E +T N EA L+ K Q + N I E D G+I+PY +Q
Sbjct: 474 LDTSEMDFKEEFVGETFGRINKEEAGLLLKELEAYIQRIGGNRILEERIDFGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + S+ + ++T+D +QG+++D I +S VR++E + L D
Sbjct: 534 VQYLRGKIKGSASLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G TLS K L+ V
Sbjct: 591 RMNVAITRARMKLVILGEAATLSHHAFYKKLLEYV 625
>gi|357061510|ref|ZP_09122260.1| hypothetical protein HMPREF9332_01818 [Alloprevotella rava F0323]
gi|355373882|gb|EHG21189.1| hypothetical protein HMPREF9332_01818 [Alloprevotella rava F0323]
Length = 1138
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 247/517 (47%), Gaps = 73/517 (14%)
Query: 867 RNSSSDADSLLHEV---WRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPR 923
R +DA+ L + W I+ D I +S+S + Y + FL + Q R +++ P
Sbjct: 623 RAPQTDANVFLRDADKHWAIEHDFIESSYSSL-YRGMHAFLSAPQER--RDLLLLQREPA 679
Query: 924 FDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTS----TMVH 979
D+ +L + N+ ++V A+D+ LI+G PGTGKTS T +H
Sbjct: 680 IDT--------SLQLCGDYGNFNE----LALRVKQAQDFFLIIGPPGTGKTSFGLMTTLH 727
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM--N 1037
+ALL ASILL SYTN AVD + KL + +DF+RIG + +++ LS+
Sbjct: 728 --EALLTPDASILLLSYTNRAVDEICSKLVDEKLDFIRIGNELSCPEVYRRYLLSSTVSE 785
Query: 1038 INSVEEIKKRL--DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
+ +E++K+R+ ++ V T L + L K FD+ I+DEA Q P +G L
Sbjct: 786 CSQLEQVKERIMSRRIFVGTTTALNTSMSLFRLKSFDLAIVDEASQILEPHLMGLLSAVK 845
Query: 1096 -------KFVLVGDHYQLPPLVQ--STEAR--ENGM--------EISLFRRL---SEEHP 1133
KFV +GDH QLP +VQ S E+R E+ + +SLF RL E P
Sbjct: 846 DNVPAIRKFVFIGDHKQLPAVVQQHSEESRVHESTLNDILLTDCRLSLFERLLKRYRERP 905
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+ + L+ Q RM I + N YG +L+ + + + + + + + + K+ L
Sbjct: 906 EMVFMLKRQGRMHHDIADFPNRTFYGGQLT--EVPLEHQQQPLPEAAPHADFFKKILTTQ 963
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKIT---QELVKNEIE-GKDIGIITPYNS 1249
R + F+ P K N EA LIA+ EL N + +G+I PY +
Sbjct: 964 R-IAFIAAPQPP----KSPSDKVNQTEADLIAEAVVKIYELTGNNFDVATTVGVIVPYRN 1018
Query: 1250 QANLIRHSL------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW-- 1301
Q IR+++ ++ + I T+++YQG +D IL F N + + +
Sbjct: 1019 QIATIRNTIDRYGIPALHDITIDTVERYQGSQRDYILYGFTIQQYYQLNFLTDTVFEEDG 1078
Query: 1302 ----HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
++NVA+TRA+K L++ G+ LS VP K L+
Sbjct: 1079 ALIDRKLNVAMTRARKHLLLFGNPDLLSAVPTFKELL 1115
>gi|418738959|ref|ZP_13295352.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|421094167|ref|ZP_15554887.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200801926]
gi|410362893|gb|EKP13926.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200801926]
gi|410745657|gb|EKQ98567.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|456887825|gb|EMF98838.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200701203]
Length = 637
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q+ A+++ + ++D A+I G PGTGKT+T+ + ++ +L+++ T+SA D
Sbjct: 188 SLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIVAEEKKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKLLNEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L ++
Sbjct: 308 KRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHSVIVSTPVASARSVLEGRR 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P + P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS---EKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G K+S+ P+ +
Sbjct: 425 RLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRP----GPEKISNFPKTFPF-GD 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L +N ++I I++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L +S +++ TID +QGR+ CI + FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L I + E+
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEK 625
>gi|333029146|ref|ZP_08457207.1| hypothetical protein Bcop_0005 [Bacteroides coprosuis DSM 18011]
gi|332739743|gb|EGJ70225.1| hypothetical protein Bcop_0005 [Bacteroides coprosuis DSM 18011]
Length = 1125
Score = 167 bits (422), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 142/440 (32%), Positives = 220/440 (50%), Gaps = 51/440 (11%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHA-VKALLMRGASILLTSYTNSA 1000
EK+ ND R + K L A+DY L++G PGTGKTS + + V+A + +ILL +YTN A
Sbjct: 689 EKAKND-LDRIVKKALAAQDYFLLVGPPGTGKTSFALRSMVEAFYEKEQTILLLAYTNQA 747
Query: 1001 VDNLLIKLK--SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKVVAV 1056
V+ + L SI ++RIG + + H L + + N+ ++ ++ +V
Sbjct: 748 VNEICKSLSRIEPSIHYIRIGSELSCEESYRGHLLETVLEDCNNRTAVRNKIYGCRVFVS 807
Query: 1057 TCLGITNP--LLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--------KFVLVGDHYQL 1106
T ++ + K+FDV I+DEA Q P LG L + KFVL+GDH QL
Sbjct: 808 TVASLSGKPEIFKLKRFDVAIVDEASQILEPQLLGLLSAKTPKGENGIGKFVLIGDHKQL 867
Query: 1107 PPLVQSTEARE-------NGMEI-----SLFRRLSE-EHPQAISALQSQYRMCQGIMELS 1153
P +VQ E N ++I +LF RL P++I L SQ RM I E +
Sbjct: 868 PAVVQQKEETSAIKDPSLNKLQIFNMRDALFERLYRLNAPKSIDWLTSQGRMHPEIAEFT 927
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRP-VIFVNTDMLPAYEAKDH 1212
N Y DRL+C + + + K V + S KE + V F+ D YE
Sbjct: 928 NHYFYQDRLTCLN--LPHQKEIVRPIVRLSVRPKEEVQDLEGRVTFIEAD----YEDCPE 981
Query: 1213 QTLNNPVEACLIAKITQELVKNEIE----GKDIGIITPYNSQANLIRHSLS------VSS 1262
N EA ++A I ++ + + K +GIITPY SQ LI+ +L +SS
Sbjct: 982 SYKINHSEAAIVAHIAHQVYEQLHDSFDANKTLGIITPYRSQIALIKSNLEQYGQEDLSS 1041
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL--GDWH---RINVALTRAKKKLIM 1317
V + T++++QG ++D I+ SF ++ + S++L GD ++NVALTRA+K+L +
Sbjct: 1042 VLVDTVERFQGSERDIIIYSFCVNAPYQLDFLSNILVEGDAQIDRKLNVALTRARKQLFL 1101
Query: 1318 VGSCRTLSKVPLLKLLINKV 1337
G L P+ K L++ +
Sbjct: 1102 TGVSSILKLNPIYKALLDYI 1121
>gi|418719080|ref|ZP_13278280.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. UI 09149]
gi|410744233|gb|EKQ92974.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. UI 09149]
Length = 637
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q+ A+++ + ++D A+I G PGTGKT+T+ + ++ +L+++ T+SA D
Sbjct: 188 SLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIVAEEKKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESISAKGISVLRLGHPARISDTALHTTLDYKLFHHSDGKLLNEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L ++
Sbjct: 308 KRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHSVIVSTPVASARSVLEGRR 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P + P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS---EKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G K+S+ P+ +
Sbjct: 425 RLETSGRVFMLDTQYRMRDEIASFPSMEFYSNRLKSGRP----GPEKISNFPKTFPF-GD 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L +N ++I I++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L +S +++ TID +QGR+ CI + FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L I + E+
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEK 625
>gi|385800522|ref|YP_005836926.1| DNA helicase [Halanaerobium praevalens DSM 2228]
gi|309389886|gb|ADO77766.1| DNA helicase [Halanaerobium praevalens DSM 2228]
Length = 749
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 176/313 (56%), Gaps = 21/313 (6%)
Query: 1040 SVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVL 1099
+VEE+ D V+ T + +L +++FD+ I+DEA Q T P +L P + A K +L
Sbjct: 445 AVEELITAAD---VICTTNITAGAEILENQQFDLSIIDEATQATQPAALIPYLKAKKTIL 501
Query: 1100 VGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIY 1158
+GD QLPP V + EA +NG++ISLF +L + + S+ L+ QYRM + IM S+ Y
Sbjct: 502 IGDQQQLPPTVVNQEAAKNGLKISLFEKLIKTYQNDFSSLLKIQYRMHRKIMGFSSIYFY 561
Query: 1159 GDRLSCGSDEIANAKIKVSDLS------SCSPWLKEALNPCRPVIFVNTDMLPAYEAK-- 1210
+ L +D + AK +SDL SC P ++L P++F++T + A E
Sbjct: 562 NNYLKA-ADSV--AKNTLSDLGFQLENKSCFP--DKSLKAEYPMVFLDTKEMKAEERSFA 616
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDK 1270
+ +NPVEA ++ + +K+ ++ ++I +I Y Q + I +VEI T+D
Sbjct: 617 GSNSYDNPVEAEIVLDLLDRALKSSLKEEEIAVIAAYKDQVDFINQHNKFKNVEIDTVDA 676
Query: 1271 YQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
+QGR+K+ I+ S VRS++ + L D R+NVALTRAK+K+I VG T+ K +
Sbjct: 677 FQGREKEMIIFSAVRSNQ---DNNIGFLRDLRRLNVALTRAKRKMIFVGDSSTICKYNVY 733
Query: 1331 KLLINKVGEQSGI 1343
+ L+ + ++SG
Sbjct: 734 EKLLKYI-KKSGF 745
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
++ N Q+ AI L AK LI G PGTGKT T V ++ + G +L T+ +N+AVD
Sbjct: 262 ENFNHSQKNAIKNSLQAKKLYLIQGPPGTGKTLTAVEIIQQAVKNGDKVLATADSNTAVD 321
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIK--KRLDQV 1051
NLL L + ++ +RIG V+K++++H L + + + +K K DQV
Sbjct: 322 NLLELLAANNLKVIRIGHPIRVNKKLREHTLDEIVLEHQDYLKAEKLRDQV 372
>gi|11498984|ref|NP_070217.1| DNA helicase [Archaeoglobus fulgidus DSM 4304]
gi|2649188|gb|AAB89860.1| DNA helicase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 648
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 157/271 (57%), Gaps = 24/271 (8%)
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
++ L ++ FD ++DEA Q T+P L P+ A KF+L GDH QLPP V E +
Sbjct: 362 SSAFLLEESFDTAVIDEASQATIPSVLIPINRARKFILAGDHRQLPPTVMKAEK----LS 417
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL----SCGSDEIANAKIKVS 1177
+LF +L E +P+ L QYRM + +ME + YG R+ SC + IA ++I
Sbjct: 418 ETLFEKLIELYPEKSQLLNVQYRMNEKLMEFPSREFYGGRIVAHESCTA--IALSQIAKR 475
Query: 1178 DLSSCSPWLKEALNPCRPVIFVNTDMLP-AYEAK--DHQTLNNPVEACLIAKITQELVKN 1234
+ + L+E L P++F++T +E K D + N +EA ++ +I EL+K
Sbjct: 476 E----AEKLREILGD-EPLVFIDTSKCKNRWEGKLADSTSRYNRLEAEIVTEIVTELLKM 530
Query: 1235 EIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
++ + IG+ITPY+ Q +L+R + VE+ ++D +QGR+K+ I++SFVRS+ R
Sbjct: 531 GLKKEQIGVITPYDDQVDLLREKV---DVEVSSVDGFQGREKEVIIISFVRSN---RKRE 584
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
L D R+NV+LTRA++KLIMVG TLS
Sbjct: 585 IGFLDDLRRLNVSLTRARRKLIMVGDSETLS 615
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q +A+ ++ D+ LI G GTGKT T+V V+ L+ RG +L+T+ +N+AVDN
Sbjct: 168 SLNRAQLKAVGCAVSTDDFFLIHGPFGTGKTRTVVEVVRQLVKRGERVLVTAESNTAVDN 227
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN-----SVEEIKKRLDQVK 1052
L+ L I VR+G V K +++H L+++ +N +EEIK ++++++
Sbjct: 228 LVELLSDMKI--VRLGHPSRVEKRLKEHTLASLVLNHPDYKRIEEIKGKIEEIE 279
>gi|398337026|ref|ZP_10521731.1| DNA and RNA helicase subunit [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 634
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/454 (29%), Positives = 208/454 (45%), Gaps = 83/454 (18%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D ++I G PGTGKT+T+ V ++ IL+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIIHGPPGTGKTTTLTEIVSQIVAEDRKILVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + + I +R+G R +VV EI K
Sbjct: 248 LVESISEKGIPVLRLGHPARISESALHSTLDYKLFHHPDGKLLSEYRRDVV--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTD 1068
V+E+KK + ++ V+ T + +L
Sbjct: 306 KFKRNFGEKEREERKNLFAEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASARGILEG 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P S P++ + + +L GDH QLPP + S +N +E++LF +
Sbjct: 366 RTFDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFS---EKNSLELTLFEKA 422
Query: 1129 SEEHPQAISA----LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
+E A+S L +QYRM I + Y D L G + A SD P
Sbjct: 423 AER--LAVSGRVFLLDTQYRMKDEIASFPSKEFYSDLLKPGRPQNERA----SDFPENFP 476
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+ K +++T + E +L NP EA L ++ L +N+ ++I I+
Sbjct: 477 FSKS-------FQWIDTAGTDSEEISVDDSLTNPYEADLQIQLCSLLRENDWPQEEITIL 529
Query: 1245 TPYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+PY +Q LI L S V I TID +QGR+ CIL+ FVRS+ R S L +
Sbjct: 530 SPYRAQVRLISEKLKEAGFSKVGISTIDSFQGRENRCILLGFVRSNSEGR---SGFLKES 586
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RINV +TRA+ L+ +G TLS+ P L LI
Sbjct: 587 RRINVGITRARDLLLCIGDSSTLSEDPFLSKLIR 620
>gi|242780461|ref|XP_002479600.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
gi|218719747|gb|EED19166.1| DNA helicase, putative [Talaromyces stipitatus ATCC 10500]
Length = 713
Score = 167 bits (422), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 143/503 (28%), Positives = 230/503 (45%), Gaps = 105/503 (20%)
Query: 921 APRFDS-GSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVH 979
+P +D+ G++ DP +LN Q+ AI L +K+ ALI G PGTGKT T++
Sbjct: 214 SPDYDAIGAIEFIDP---------TLNHSQKEAIRFALASKEIALIHGPPGTGKTHTLIE 264
Query: 980 AVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN 1039
+ ++ R IL+ +N +VDN++ +L + VR+G + + H L +
Sbjct: 265 LILQMIRRNMRILVCGPSNVSVDNIVERLAPHRVPIVRVGHPARLLSSVLDHSLEVLTQT 324
Query: 1040 S-----VEEIKKRLDQ------------------------------------------VK 1052
S V +++K +D+ K
Sbjct: 325 SEAAEIVRDVRKEIDEKQASIRKTRNGRERREIYGDLKELRKEFRERESKCVEDLVTGSK 384
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T G L ++KFDV I+DEA Q PL+ AS+ VL GDH QLPP ++S
Sbjct: 385 VVLATLHGAGGHRLKNQKFDVVIIDEASQALEAQCWIPLLTASRAVLAGDHLQLPPTIKS 444
Query: 1113 T--------------EAREN-------GMEI--SLFRRLSEEH-PQAISALQSQYRMCQG 1148
+ EA ++ G+ + ++F RL H P L +QYRM +
Sbjct: 445 SNIDSSKKTSKTKVKEAEKSSSLDSLQGVSLGQTMFDRLLALHGPSIKRMLTTQYRMHEK 504
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLP 1205
IM+ + +Y +L IA +K L +++ + P++F++T D
Sbjct: 505 IMQFPSNEMYEGKL------IAADSVKDRLLKDLPYGVEDTDDTKEPLVFIDTQGGDFPE 558
Query: 1206 AYEAKD--------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
E +D ++ +N +EA + + + L+ + +DI +ITPYN+Q LI
Sbjct: 559 KAEDEDATIKGGLLSESKSNEMEARVAIRHVEGLIDAGVRPEDIAVITPYNAQVALIAQC 618
Query: 1258 L--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
L +EI ++D +QGR+K+ I+VS VRS+E LG+ R+NVA+TR K+ L
Sbjct: 619 LREKYPGIEIGSVDGFQGREKEAIVVSLVRSNEKHE---VGFLGEKRRLNVAMTRPKRHL 675
Query: 1316 IMVGSCRTLSKVPLLKLLINKVG 1338
+ G T+SK K L N +G
Sbjct: 676 CVCGDSETISKGS--KFLKNWIG 696
>gi|116331470|ref|YP_801188.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116125159|gb|ABJ76430.1| DNA and RNA helicase subunit [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 637
Score = 166 bits (421), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q+ A+++ + ++D A+I G PGTGKT+T+ + ++ +L+++ T+SA D
Sbjct: 188 SLNPSQKNAVLRCVLSEDIAVIHGPPGTGKTTTLTEIISQIVAEEKKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESISAKGISVLRLGYPARISDTALHTTLDYKLFHHSDGKLLNEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L ++
Sbjct: 308 KRNFGEKEKEDRKNLFQEVKELKKTIRSMEKGLIDSLISSHSVIVSTPVASARSVLEGRR 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P + P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPATWIPILKSDRVILAGDHKQLPPTLFS---EKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G K+S+ P+ +
Sbjct: 425 RLETSGRVFMLDTQYRMKDEIASFPSMEFYSNRLKSGRP----GPEKISNFPKTFPF-GD 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L NP EA L ++ L +N ++I I++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVRLCTLLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L +S +++ TID +QGR+ CI + FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLQEAGLSKIQVSTIDSFQGRENRCIFLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRAK L+ +G TL + P L I + E+
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRFIRFMEEK 625
>gi|395545472|ref|XP_003774625.1| PREDICTED: DNA-binding protein SMUBP-2, partial [Sarcophilus
harrisii]
Length = 780
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 196/395 (49%), Gaps = 60/395 (15%)
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
+L + +N AVDNL+ +L +Q +R+G + IQ HCL A+ S V +I+
Sbjct: 1 VLCCAPSNVAVDNLVERLAAQKQKVLRLGHPARLLDAIQHHCLDAVLARSDQAQIVADIR 60
Query: 1046 KRLDQVK--VVAV--------------------------TCLGITNP------------L 1065
K +D+V+ V + LG+ +P L
Sbjct: 61 KDIDRVRGGVKGMKTLDKRDKSYGRNELKLLRKELRGLQNVLGLRDPFEPGASPDGPLKL 120
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLF 1125
L D FDV ++DE Q PL+ A K VL GDH QLPP + S +A G+ +SL
Sbjct: 121 LPDNYFDVVVIDECAQALEASCWIPLLKARKCVLAGDHQQLPPTIVSHQAASGGLALSLM 180
Query: 1126 RRLSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
RL +H + + L QYRM Q IM+ ++ +Y +L+ S +A +K DL P
Sbjct: 181 ERLIAKHGDKVVRMLTVQYRMHQAIMQWASDELYHGQLTAHSS-VAGHLLK--DLPGVVP 237
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEA--KDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ ++ P++ ++T +E +D Q+ NP E L++ Q LV + D+
Sbjct: 238 TEETSI----PLLLIDTAGCGLFELEDEDEQSRGNPGEVRLVSLHVQALVDAGVRVGDMA 293
Query: 1243 IITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+ITPYN Q +L+R LS +EI ++D +QGR+K+ +++SFVRS+ R L +
Sbjct: 294 VITPYNLQVDLLRQQLSPKYPELEIKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAE 350
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RINVA+TRA++ + +V RT+ LK L++
Sbjct: 351 DRRINVAVTRARRHVAVVCDSRTIGSDAFLKRLVD 385
>gi|422003681|ref|ZP_16350909.1| DNA and RNA helicase subunit [Leptospira santarosai serovar Shermani
str. LT 821]
gi|417257651|gb|EKT87048.1| DNA and RNA helicase subunit [Leptospira santarosai serovar Shermani
str. LT 821]
Length = 634
Score = 166 bits (421), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 213/459 (46%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLND Q+ A++ + ++D +++ G PGTGKT+T+ V L+ G +L+++ T+SA D
Sbjct: 188 SLNDSQKNAVLHCVLSEDVSIVHGPPGTGKTTTLTEIVNQLVEEGRKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH-------KEIQKHCLSAMN----- 1037
L+ + ++ I +R+G +++ H E +K +
Sbjct: 248 LVESISAKGISVLRLGHPARIGEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISRQAKKY 307
Query: 1038 ---------------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + + +L K
Sbjct: 308 KRNFGEKEREERRNLFQEVKELKKTIRSMEKGLIDSLISSHPVIVSTPVASSRSVLEGKT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P S P++ + + +L GDH QLPP + S N +E +LF + +E
Sbjct: 368 FDFCVLDESSQALEPASWIPILKSDRVILAGDHKQLPPTLFSD---RNSLETTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I S+ Y +RL G + S+ P+
Sbjct: 425 RLEFSNRVFLLDTQYRMKDEISSFSSMEFYSNRLKSGRP----MPERTSNFPETFPF--- 477
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E ++ NP EA L ++ L +N ++I I++PY
Sbjct: 478 ----GNAFQWIDTAGTDSEEVSMDDSIINPFEADLEVRLCILLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L + V++ TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLLSEKLREAGLFKVQVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRA+ L+ +G TL + P L LI + E+ G+
Sbjct: 591 VGMTRARDLLLCIGDSSTLLEDPFLSKLI-QFAEEKGVF 628
>gi|254167856|ref|ZP_04874705.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|197623147|gb|EDY35713.1| DNA helicase, putative [Aciduliprofundum boonei T469]
Length = 655
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 174/319 (54%), Gaps = 21/319 (6%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
+ + I+++ A + + IK+ L V+ T + LL D FD ++DEA Q+
Sbjct: 336 IQRRIEEYVKKAKKMEE-KVIKRVLKNADVICTTNSTAGSELLYDMDFDFVVIDEATQSI 394
Query: 1084 LPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P L P++ ++++ GDH QLPP + S +A+ ++++LF R + +P L+ QY
Sbjct: 395 EPSCLIPMIKGDRYIMAGDHRQLPPTIMSYKAK--ALQLTLFERFIKLYPHLSITLRVQY 452
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIK---VSDLSSCSPWLKEALNP-CRP---V 1196
RM + IM+ + L Y D L IA+ +K + DL + L+E + C P +
Sbjct: 453 RMNEKIMKFPSKLFYNDLL------IAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSII 506
Query: 1197 IFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
+F++ + + + N EA ++ L+K ++ K IGIITPY+ Q +L+R
Sbjct: 507 VFLDMQNCKEEKRRGSTSYYNECEAGMVKDTVDCLLKIGLKEKHIGIITPYDDQVDLLRS 566
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+ +EI ++D +QGR+KD I++SFVRS++ L D R+NVA+TRAK+KLI
Sbjct: 567 --MIEDIEIKSVDGFQGREKDVIIISFVRSND---KGDIGFLDDLRRLNVAITRAKRKLI 621
Query: 1317 MVGSCRTLSKVPLLKLLIN 1335
M+G+ +TLS + LI+
Sbjct: 622 MLGNAKTLSSNEVYAKLID 640
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+ LN+ Q++A+ + L + LI G PGTGKT+T+ + ++ +G +L T+ +N AVD
Sbjct: 175 RRLNNFQKKAV-ESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKKGYKVLATADSNVAVD 233
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE-----EIKKRLDQVK 1052
NL+ KL + ++ VR+G + K I +H L + +E EI +++D ++
Sbjct: 234 NLVEKL-AHKVNVVRVGHPARIGKSIIEHTLDYIVAQDIEYKKAMEIWEKIDNMR 287
>gi|124009432|ref|ZP_01694109.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
gi|123984980|gb|EAY24938.1| dna-binding protein smubp-2 [Microscilla marina ATCC 23134]
Length = 649
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 223/457 (48%), Gaps = 88/457 (19%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+ Q A+ +L A+D A+I G PGTGKT+TMV AVK L + +L+T+ +N+AVD
Sbjct: 182 TLNESQNEAVQNILRAQDVAIIHGPPGTGKTTTMVAAVKLTLQQEKQVLVTAPSNTAVDL 241
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVK------ 1052
L +L ++ + +R+G V++++ L + + +++I++ D+ K
Sbjct: 242 LTKRLLAKGVSVIRVGNPARVNEDLIPFSLESQIAQHPDYKLLKKIRRDADEYKKMAAKY 301
Query: 1053 ------------------------------------------VVAVTCLGITNPLLTDKK 1070
VV T +G N + ++
Sbjct: 302 KRNFGKEEREQRKLMFAEASKLKHEAYALEKYIVDSLLNNTQVVTATLVGSVNKFIRYRR 361
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
F +DEAGQ P PL+ + + V GDH QLPP ++S +A + G+ +LF ++ +
Sbjct: 362 FSTVFIDEAGQALEPACWIPLLKSERVVFAGDHCQLPPTIKSFDAAKGGLTETLFEQVIK 421
Query: 1131 EHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV-SDLSSCSPWLKE 1188
+ QA+ L++QYRM + IM+ SN Y L +D + N ++ +DL E
Sbjct: 422 K--QAVDVMLKTQYRMHEHIMQFSNKEFYQGEL-LAADTVVNHRLFAHADLQG------E 472
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN-EIEGKDI---- 1241
+N +PV F++T E +T + NP EA ++ K +L ++ D+
Sbjct: 473 MIN--QPVEFIDTAGCGFEEKTMAETGSKYNPDEAGILLKHWIQLATQLQLAEPDMLKEG 530
Query: 1242 ----GIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
GII+PY +Q ++ + +I++ID +QG+++D + +S VRS++
Sbjct: 531 WFSAGIISPYQAQVKHLKELFAEHPDLTEVAPWTDINSIDGFQGQERDVVYISMVRSNDK 590
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ L D R+NVALTRA+KKL+++G TL +
Sbjct: 591 GK---IGFLEDTRRMNVALTRARKKLVVIGDSGTLGQ 624
>gi|421099790|ref|ZP_15560434.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200901122]
gi|410797214|gb|EKR99329.1| type III restriction enzyme, res subunit [Leptospira borgpetersenii
str. 200901122]
Length = 637
Score = 166 bits (420), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 211/449 (46%), Gaps = 75/449 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN Q+ A+++ + ++D A+I G PGTGKT+T+ V L++ G +L+++ T+SA D
Sbjct: 188 SLNPSQKNAVLRCVFSEDIAVIHGPPGTGKTTTLTEIVSQLVVEGKKVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESISAKGISVLRLGHPARISEAVLNSTLDYKLFHHSDGKLLNEYRKDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L +
Sbjct: 308 KRNFGEKEKKERKNLFQEVKELKKMIRSMEKGLIDSLVSSHPVIISTPVASARSVLEGRT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P P++ + + +L GDH QLPP S + +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPP---SLFSEKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G E + S+ P+
Sbjct: 425 RLETSGRVFLLDTQYRMKDEISFFPSMEFYSNRLKSGRPEPE----RTSNFPETFPF--- 477
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+++T + E +L NP EA L ++ L +N+ ++I I++PY
Sbjct: 478 ----GNAFQWIDTAGTDSEEVAVDDSLTNPFEADLQVRLCILLQENDWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q L+ L +S +++ TID +QGR+ CIL FVRS+ R S L + RIN
Sbjct: 534 AQVRLVLEKLQEAGLSKIQVSTIDSFQGRENRCILFGFVRSNAEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
V +TRAK L+ +G TL + P L LI
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRLI 619
>gi|379729487|ref|YP_005321683.1| DNA helicase [Saprospira grandis str. Lewin]
gi|378575098|gb|AFC24099.1| DNA helicase [Saprospira grandis str. Lewin]
Length = 1127
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 243/992 (24%), Positives = 413/992 (41%), Gaps = 181/992 (18%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRS---VLDERLKCSERSISALLGTLLHQIFQAGLMKEI 501
+I+ PD LV T +A F S L ++ E S+ +LG + ++ L+ +
Sbjct: 223 IILEPDYLVDVTSIAECFQPQGASPYLFLLKKFSAYENSLPLMLGNIANRFL--DLLSKN 280
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW--IILFKDSQDLNTP 559
P + F EE+ +L ++ L + DI KT EA +N IIL
Sbjct: 281 PKLSFQEEFKKLF---SLNPLGFADFKDTDIRKTYHEAKNHFINLQHIIL---------- 327
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
+F G+++ +I +E ++ YG++G +D + E + L +E K
Sbjct: 328 -NEFPKQGIERERIL----LEPSFYSALYGIQGRLD------LWQPPVEGDDKALIVELK 376
Query: 620 TGK--IPNGQS-SMEHRAQVILYTLLMSERY-----LKHIDSGLLY----------YLQS 661
+GK +PN + + H Q +LY LL Y L HI L +
Sbjct: 377 SGKTFMPNKYNLNHNHYVQTLLYGLLTKSVYPSYKSLAHILYSKLQEKPLRLAPSTQFKE 436
Query: 662 DQT-----QGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKECSGLGNM 716
D+ Q VM++R L L + E + QL P + GL
Sbjct: 437 DEALALRNQMVMIERQ-LAQLDQKSLE------EYGLLHQLGPAIMPKASGYTARGLEE- 488
Query: 717 FDSHIYHLT-------TAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLS 769
F++ L+ A CSF + K +I G GN +
Sbjct: 489 FEACFSKLSELERRYFIAFCSF----------------IAKEQILAKTGVEGNERANGQA 532
Query: 770 SIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD--CTLRSG 827
+ L +++ +D HF N S+ D I T++ + R G
Sbjct: 533 GLWLS-----ERADKDE----HFELLAGLELLENNSEQDPPILRFKRTENTNPLANFRQG 583
Query: 828 DYVILSTESD------RLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW 881
D IL E + + G I++I+ + P + S S ++ + W
Sbjct: 584 DIAILYPEMGQDDNVLKHQIFKGSISQINAEELCFKLYSP-----QCSGSVFEA--AKSW 636
Query: 882 RIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIW 940
++ D + F+V +L + A+ R++++ AP+ S Q+ + +
Sbjct: 637 SLEHDMLDKGFTVQYQSLFKFMNFHPAK----RQLLLGQRAPQKSSAP---QNRS----F 685
Query: 941 SEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA--SILLTSYTN 998
+ L +DQ+R + K L A+DY L++G PGTGKT M+ + L R + +ILL +YTN
Sbjct: 686 MQPYLGEDQKRILNKALDAQDYFLLVGPPGTGKTKFMLAQMVEYLHRNSQENILLLAYTN 745
Query: 999 SAVDNLLIKLKSQSI-DFVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVA 1055
AVD + ++ I D++R+G + S + S ++++ +D+ +V
Sbjct: 746 RAVDEICEAIEEVGIHDYLRMGSRYSCDPRFEHRMFSVQTEALASRKDLRATIDKHRVFV 805
Query: 1056 VTCLGITN-PLLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV-QS 1112
T + N PLL K+F+ I+DEA Q P+ LG L +FVL+GDH QLP +V Q
Sbjct: 806 STVSSMLNRPLLLKLKQFNTVIIDEASQILEPMLLGLLPHFQRFVLIGDHKQLPAVVLQD 865
Query: 1113 TEARENGMEI-----------SLFRRLSEEHPQ-----AISALQSQYRMCQGIMELSNAL 1156
E E+ SLF RL E+ + LQ Q RM I +
Sbjct: 866 KEQSAVKDELLQSIGLRNRRNSLFERLFEQAQKEGWTHCYDQLQHQGRMHAEIARFPSQF 925
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV--------IFVNTDMLPAYE 1208
Y ++L +++ + + W ++ L P RP+ + +L
Sbjct: 926 FYDNKL-----------LELPEDNPIGDWQQQPL-PFRPMPQASALEQLLAQHRLLFIPS 973
Query: 1209 AKDHQ--TLNNPVEACLIAKIT---QELVKNEIEG---KDIGIITPYNSQANLIRHSLS- 1259
D+Q + N EA + ++ + L + + G +D+GIITP+ +Q IRH L+
Sbjct: 974 QSDYQGNSKTNEEEAIRVGELVHAFRNLYEQQGGGFAPEDLGIITPFRAQIAQIRHVLAQ 1033
Query: 1260 ----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH---RINVALTRAK 1312
I T+++YQG + IL+S + + SL D ++NVALTRA+
Sbjct: 1034 YNMGYEQCSIDTVERYQGGARKIILLSLAINMSHQLPAIVSLSDDEQVDRKLNVALTRAR 1093
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
++L+++G+ + L+ P L+ + E+ G
Sbjct: 1094 QQLVVLGNPKLLANDPRYAALMAWIKERGGYF 1125
>gi|337284021|ref|YP_004623495.1| DNA helicase [Pyrococcus yayanosii CH1]
gi|334899955|gb|AEH24223.1| DNA helicase [Pyrococcus yayanosii CH1]
Length = 656
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 158/281 (56%), Gaps = 14/281 (4%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FDV ++DEA Q T+P L P+ +F+L GDH QLPP + S EA + +LF L E
Sbjct: 377 FDVAVIDEATQATIPSILIPINRVERFILAGDHRQLPPTILSLEA--QALSKTLFEGLIE 434
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS--DEIANAKIKVSDLSSCSPWLKE 1188
+P+ + L QYRM + +M + Y ++ I A + V + PW E
Sbjct: 435 RYPEKSAMLNIQYRMNERLMAFPSREFYEGKIIADESVKNITLADLGVKEPGFSEPW-AE 493
Query: 1189 ALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
L P ++F++T + + ++ NP+EA ++A I +L++ ++ + IG+IT
Sbjct: 494 ILRPENVLVFIDTAHRHDKWERQRRGSESRENPLEAKIVATIVGKLIEMGVKPEWIGVIT 553
Query: 1246 PYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
PY+ Q +LI SL+V VE+ T+D YQGR+K+ I++S VRS+E L D R+
Sbjct: 554 PYDDQRDLI--SLNVPEDVEVKTVDGYQGREKEVIILSLVRSNE---RGEIGFLRDLRRL 608
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
NV+LTRAK+KLI+VG TLS P K L+ V E+ +++
Sbjct: 609 NVSLTRAKRKLIIVGDSATLSSHPTYKRLVEFVKEKGKLVD 649
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K LN Q++A+ L + D+ LI G GTGKT T+ ++ + RG +L T+ +N AV
Sbjct: 169 DKRLNASQKKAVSLALGSSDFFLIHGPFGTGKTRTLAELIRQEVKRGNKVLATAESNVAV 228
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS 1034
DNL+ +L ++ VRIG V K + + L+
Sbjct: 229 DNLVERL--AELNVVRIGHPSRVSKHLHETTLA 259
>gi|288803446|ref|ZP_06408878.1| DNA helicase [Prevotella melaninogenica D18]
gi|288334056|gb|EFC72499.1| DNA helicase [Prevotella melaninogenica D18]
Length = 638
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 218/461 (47%), Gaps = 79/461 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q +A+ +VL AKD A++ G PGTGKT+T+V A+ LMR + +++ + +N AVD +
Sbjct: 178 LNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRESQVMVCAQSNMAVDWI 237
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH-----------CLSAMNIN---SV 1041
KL + I+ +RIG V+ ++ + H + + N
Sbjct: 238 CEKLVDRGINVLRIGNPTRVNDKMLGFTYERKFEAHPDYPQLWSIRKAIRELRNNRKKGS 297
Query: 1042 EEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
E +++D++K VVA T +G + ++ + F +DEA Q
Sbjct: 298 ESYHQKMDRLKSRATELEIRINAALFGEARVVASTLVGANSRIMEGQNFTTLFIDEAAQA 357
Query: 1083 TLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
+ AS+ + GDH QLPP V+S A G+ +L R+ E P+ ++ L+ Q
Sbjct: 358 LEAACWIAIRRASRVIFAGDHCQLPPTVKSIAALRGGLGKTLMERIVENKPEVVTLLKVQ 417
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--------------------SDE--IANAKIKVSDLS 1180
YRM + IM S+ YG ++ SDE +A+ + S+ +
Sbjct: 418 YRMNEEIMRFSSDWFYGGQVETAPQIKYRGILDYDNPMVWIDTSDEAVVASYDLTESEAN 477
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
S L FV + + + TL V+ KI ++ V + E D
Sbjct: 478 SAPSQLDNDKENAFHEQFVGSSFGRINKGEAELTLKTLVD--YFTKIGKQRVLD--ERID 533
Query: 1241 IGIITPYNSQANLIRHSLSV--------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
+G+I+PY +Q +R + S + ++T+D +QG+++D IL+S VRS+++ +
Sbjct: 534 VGVISPYRAQVQYLRSLIKKRAFFKPYRSLISVNTVDGFQGQERDVILISLVRSNDDGQ- 592
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
L D R+NVA+TRA+ KLI++G+ +T++K K L
Sbjct: 593 --IGFLRDLRRMNVAITRARMKLIILGNVQTMTKHEFYKKL 631
>gi|345007371|ref|YP_004810223.1| AAA ATPase [halophilic archaeon DL31]
gi|344322997|gb|AEN07850.1| AAA ATPase [halophilic archaeon DL31]
Length = 793
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/411 (30%), Positives = 201/411 (48%), Gaps = 62/411 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q A L +K+ I G PGTGKT T+ + ++ G ++L+++++N AVDNL
Sbjct: 384 LNEYQAEAAELCLRSKEVYCIHGPPGTGKTRTLNAIARQVIAEGGTVLMSAHSNQAVDNL 443
Query: 1005 LI-----------------KLKSQSIDFV--RIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
L+ + ++++D R+G + K +QKH I
Sbjct: 444 LVGDSAPNAPDEGSLHALAQDPNETLDITISRVGTNSS-DKVVQKHY-----------IG 491
Query: 1046 KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
+ +V T + FD+ I+DEA Q ++P +L P A K +L GDH Q
Sbjct: 492 ESSSSANIVGATTSAAD--MFDAGSFDLAIVDEATQASIPATLVPYTCADKLILAGDHKQ 549
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSC 1164
LPP +STEA E + +SLF + E + I + L+ QYRM + I E + Y
Sbjct: 550 LPPY-KSTEAEERPIYVSLFEHMIETYDTGIQTMLRRQYRMNEQIAEFPSQAFY------ 602
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
N+ ++ +D ++ W + P+I +N D E+ + N EA ++
Sbjct: 603 ------NSSLETADRNTN--W---TVPGEPPLIGINID---GPESSSGTSKKNEREARVV 648
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSL------SVSSVEIHTIDKYQGRDKDC 1278
K + L + + DIGIITPY++Q I+ L + + I TID +QG +++
Sbjct: 649 TKRVKALAEKGVRMSDIGIITPYSAQIPTIKQHLHNHVEERTNRITIDTIDAFQGSEREA 708
Query: 1279 ILVSFVRSSENPRNCTSSLLGDW-HRINVALTRAKKKLIMVGSCRTLSKVP 1328
I++SFVRS++ + +L + R+NVALTRAKK L ++ TLS+ P
Sbjct: 709 IIISFVRSNDTGESGFLTLPDEGPRRLNVALTRAKKHLSIIADFETLSQTP 759
>gi|300773891|ref|ZP_07083760.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
gi|300760062|gb|EFK56889.1| DNA helicase [Sphingobacterium spiritivorum ATCC 33861]
Length = 634
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 215/458 (46%), Gaps = 85/458 (18%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA-SILLTSYTNSAVD 1002
LN+ Q +A+ +++ + ++ G PGTGKT+T+V +KALL + IL+T+ +N+AVD
Sbjct: 181 GLNEYQLKAVNQIIASPHLTIVHGPPGTGKTTTLVQGIKALLQKYPDQILVTAPSNTAVD 240
Query: 1003 NLLIKLKSQSIDFVRIGR--------HEV----------VHKEI---------------- 1028
L KL + VRIG HE+ + KE+
Sbjct: 241 LLTEKLHETGVKVVRIGNPVKVSEQLHELTLDGKLESHPMQKELKTIRKKADVFRDMAKK 300
Query: 1029 -----------QKHCL--SAMNI-NSVEEI-----KKRLDQVKVVAVTCLGITNPLLTDK 1069
QK L A N+ E+I K LDQ +V+ T +G + + D+
Sbjct: 301 YKRNFGKAERDQKKALFQEAKNLMKEAEQIAQYIQKDILDQAQVITATLVGSNHSAIQDR 360
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
+ +DEAGQ P P++ + K +L GDH QLPP ++S ++ +L +L
Sbjct: 361 TYAAVFIDEAGQALEPACWIPILKSDKLILAGDHLQLPPTIKSKDSSVRAFHETLMEKLV 420
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+P + L+ QYRM Q IM+ +A +Y + L IA ++ D
Sbjct: 421 HAYPSCVCLLRQQYRMHQDIMQYPSAALYNNTL-FAEPSIAQQELTPGD----------- 468
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEA-CLIAKITQELV-----KNEIEGKDIGI 1243
+F++T E ++ ++N EA LI +TQ L +N +IG+
Sbjct: 469 ----NAFLFIDTAGAGFDEVQEDTAISNIEEANFLIQHLTQYLAAFKKDENMSPFPNIGL 524
Query: 1244 ITPYNSQANLIRH-----SLSVS-SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
I+PY Q L++ + +S S++I TID +QG+++D I +S RS+ +
Sbjct: 525 ISPYRQQVLLLKELIRNDEMKISVSIQIQTIDGFQGQERDIIYISLTRSNAEGQ---IGF 581
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L + R+NVA+TRA+ KLI++G T+ + P +I
Sbjct: 582 LNEIRRMNVAMTRARYKLIIIGDSSTIGQHPFYAGMIQ 619
>gi|116180746|ref|XP_001220222.1| hypothetical protein CHGG_01001 [Chaetomium globosum CBS 148.51]
gi|88185298|gb|EAQ92766.1| hypothetical protein CHGG_01001 [Chaetomium globosum CBS 148.51]
Length = 615
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 141/535 (26%), Positives = 234/535 (43%), Gaps = 98/535 (18%)
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY 938
VW + + +T F M + +L ++ + S R++ L +P + + +
Sbjct: 61 VWIVKVADDVT-FRRMNATMERLAKMEEREYSAFVRVLFGLSSPSPVAADLTRDEEVGEI 119
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTN 998
W + +LND Q+ AI L +++ LI G PGTGKT T++ + LL R +L+ +N
Sbjct: 120 EWVDPTLNDSQKDAIRFALASREIGLIHGPPGTGKTHTLIELILQLLKRNLRVLVCGPSN 179
Query: 999 SAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ--- 1050
+VDN++ +L I +R+G + + H L + S V++++ +D
Sbjct: 180 ISVDNIVERLAPHKIPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIVKDVRAEMDAKQA 239
Query: 1051 ---------------------------------------VKVVAVTCLGITNPLLTDKKF 1071
KVV T G L ++F
Sbjct: 240 SIRKTRNARERRAIYADLKDLRKEYRERERRCVSSLVAGSKVVLATLHGAGGFQLRGEQF 299
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS---------------TEAR 1116
DV ++DEA Q PL+ ASK + GDH QLPP ++S T+
Sbjct: 300 DVVVIDEASQALEAQCWVPLLAASKAICAGDHLQLPPTIKSLNLKKKGSSKKGKDATDGE 359
Query: 1117 EN-----GMEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIA 1170
E +E +LF RL + H P L +QYRM + IM + +Y +L IA
Sbjct: 360 EGVVKGATLETTLFDRLLKLHGPSIKRMLTTQYRMHEKIMRFPSDELYERKL------IA 413
Query: 1171 NAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM--LPAYEAKDH---------------- 1212
+K L + + + P+IF++T P D
Sbjct: 414 ADAVKARLLKDLPYEVDDTDDTTEPLIFIDTQGGDFPEKNEDDQDASGGSKKLTKSSLYG 473
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKY 1271
+ +N +EA L+ + Q LV ++ +DI ++TPYN+Q A L + +E+ ++D +
Sbjct: 474 DSKSNEMEAALVRQHVQSLVDAGVKPEDIAVVTPYNAQLAVLAPLKEAFPGIELGSVDGF 533
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+K+ ++VS VRS NP + LG+ R+NVA+TR K+ L ++G T+ K
Sbjct: 534 QGREKEAVIVSLVRS--NP-DGEVGFLGEKRRLNVAMTRPKRSLTVIGDSETVKK 585
>gi|255939099|ref|XP_002560319.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584941|emb|CAP82980.1| Pc15g00940 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 716
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 159/578 (27%), Positives = 256/578 (44%), Gaps = 121/578 (20%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T V ++F R G S + D + E+W ++ D ++ MR
Sbjct: 136 GVVTRTGDRAVWIAFG---RQGGGGMSKEDDEAVGELWGKKVWAIKLAND---VTYRRMR 189
Query: 897 YNLVQLF-LQSAQSSQLRRMIVDLEAP-RFDS---GSVFSQDPALSYIWSEKSLNDDQRR 951
+ ++ + ++ S R+ P + D+ G V DP SLND Q+
Sbjct: 190 QTMEKMVKMSESEYSHFMRVAFGHTTPLQLDTEACGPVEFTDP---------SLNDSQKE 240
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
AI L ++D ALI G PGTGKT T++ + L+ R +L+ +N +VDN++ +L +
Sbjct: 241 AIQFALASRDIALIHGPPGTGKTHTLIELILQLVQRRKRVLVCGPSNVSVDNIVERLAPK 300
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK-------------- 1052
+ VRIG + + +H L + S V++I+K +D+ +
Sbjct: 301 KVPVVRIGHPARLLPSVLEHSLEVLTQTSDAGGIVKDIRKEIDEKQASIRKTRSGRERRG 360
Query: 1053 ----------------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
VV T G L ++KFDV I+DEA Q
Sbjct: 361 IYDDLKLLRKEFRERESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVIIDEASQALE 420
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQST-------------EAREN----------GME 1121
PL+ A K VL GDH QLPP V+ST E N +E
Sbjct: 421 AQCWIPLLGADKVVLAGDHLQLPPTVKSTGQNSKDQTSKGTEEKTGNNTDTETLKGVSLE 480
Query: 1122 ISLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
+LF RL H I L +QYRM + IM + +Y ++L SD + A++ + DL
Sbjct: 481 RTLFDRLLALHGPGIKRMLTTQYRMHEKIMRFPSDELYEEKL-MASDAV-KARLLI-DL- 536
Query: 1181 SCSPWLKEALNPCR-PVIFVNT----------DMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
P+ E + + P++F +T D + A + +N +EA ++A+
Sbjct: 537 ---PYEVEGTDDTQEPLVFWDTQGGDFPEKAEDEISQKGALLGDSKSNEMEAMVVARHVD 593
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
L+ I + I +ITPYN Q L+ L + +E+ ++D +QGR+K+ ++VS VRS+
Sbjct: 594 NLIDAGIRPESIAVITPYNGQLALLSRMLREKYAGLELGSVDGFQGREKEAVVVSLVRSN 653
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
LG+ R+NVA+TR K+ L + G T+S
Sbjct: 654 AEHE---VGFLGEKRRLNVAMTRPKRHLCICGDSETIS 688
>gi|410940949|ref|ZP_11372748.1| AAA domain protein [Leptospira noguchii str. 2006001870]
gi|410783508|gb|EKR72500.1| AAA domain protein [Leptospira noguchii str. 2006001870]
Length = 634
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 218/455 (47%), Gaps = 75/455 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A++ + ++D A+I G PGTGKT+T+ V+ L+ +L+++ TNSA D
Sbjct: 188 SLNESQKNAVLHCVLSQDVAVIHGPPGTGKTTTLTEIVRQLVAEEKKVLVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------ 1039
L+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 248 LVESISAKGIPVLRLGHPARVSEAAIHSTLDYKLFHHPDGKLLNEYKKDVIEISKQAKKF 307
Query: 1040 -----------------SVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
V+E+KK + ++ V+ T + +L ++
Sbjct: 308 KRNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHSVIVSTPVASARGVLENRT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P P++ + + +L GDH QLPP + S ++ +E +LF ++ E
Sbjct: 368 FDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFSEKS---FLEFTLFEKVIE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ + + L +QYRM I+ S+ Y L G E K + D P+
Sbjct: 425 RLKSYERVFLLDTQYRMKDEIVSFSSKEFYSGLLKSGRPE----KERFFDFPKTFPF--- 477
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
LN + + TD + E +++NP EA L +I L +N ++I I++PY
Sbjct: 478 -LNVFQWIDTAGTD---SEEVIVDDSISNPFEADLQVRICSLLKENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RIN
Sbjct: 534 AQVRLIAEKLRDAGLTKISVSTIDSFQGRENRCILLGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
V +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 591 VGMTRARDLLLCIGDSSTLSQDPFLWKLIRFAEEK 625
>gi|367044056|ref|XP_003652408.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
gi|346999670|gb|AEO66072.1| hypothetical protein THITE_2047968 [Thielavia terrestris NRRL 8126]
Length = 728
Score = 165 bits (418), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 157/610 (25%), Positives = 263/610 (43%), Gaps = 118/610 (19%)
Query: 824 LRSGDYVILST------------ESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSS 871
+R+GD V+LS E +R V G++T + V+V+ + + S
Sbjct: 100 IRTGDIVLLSEQPSGQARKREVRELERRGV-KGVVTRVGNAVVAVAVDEKAEDREGDGSG 158
Query: 872 DADSLL---HEVWRIDKDEIMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSG 927
+LL VW + + +T S M + +L + A+ S R++ L +P
Sbjct: 159 GVGALLSGEKRVWIVKVADDVTFRSRMNATMERLAKMGEAEYSPFIRVLFGLSSPSPVPA 218
Query: 928 SVFSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S+DP + I W + +LND Q+ AI L +++ ALI G PGTGKT T++ + LL
Sbjct: 219 D-LSRDPEVGEIEWVDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQLLK 277
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
R IL+ +N +VDN++ +L + +R+G + + H L + S V
Sbjct: 278 RNQRILVCGPSNISVDNIVERLAPHKVPLIRLGHPARLLPSVLNHSLDVLTRTSEAGAIV 337
Query: 1042 EEIKKRLDQ------------------------------------------VKVVAVTCL 1059
++++ +D KVV T
Sbjct: 338 KDVRAEMDAKQASIRKTRNAKERRAIYADLKELRKEYRERERRCVSDLVAGSKVVLATLH 397
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G L D++FDV I+DEA Q L+ A K + GDH QLPP ++S ++
Sbjct: 398 GSGGFQLRDEQFDVVIIDEASQALEAQCWVALLAAKKAICAGDHLQLPPTIKSLNSKMTK 457
Query: 1120 ----------------------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNAL 1156
+E +LF RL + H P L +QYRM + IM +
Sbjct: 458 PSSTKGKDAAAAADEPTIKGATLETTLFDRLLKLHGPSIKRMLTTQYRMHEKIMRFPSDE 517
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM--LPAYEAKDHQ- 1213
+Y +L IA +K L + + + P++F++T P + Q
Sbjct: 518 LYEGKL------IAADAVKARLLRDLPYEVADTDDTTEPLVFIDTQGGDFPEKNEDEQQD 571
Query: 1214 ----------------TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRH 1256
+ +N +EA L+ + + LV ++ +DI ++TPYN+Q A L
Sbjct: 572 AAGGGKKLTKSSLYGDSKSNEMEAALVRQHVRRLVDAGVKPEDIAVVTPYNAQLAILAPL 631
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+E+ ++D +QGR+K+ ++VS VRS+ + LG+ R+NVA+TR K+ L
Sbjct: 632 KEMFPGIELGSVDGFQGREKEAVIVSLVRSNA---DGEVGFLGEKRRLNVAMTRPKRSLT 688
Query: 1317 MVGSCRTLSK 1326
++G T+ K
Sbjct: 689 VIGDSETVKK 698
>gi|307102593|gb|EFN50864.1| hypothetical protein CHLNCDRAFT_59413 [Chlorella variabilis]
Length = 762
Score = 165 bits (418), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 209/443 (47%), Gaps = 70/443 (15%)
Query: 946 NDDQRRAIIKVLTAKDYALILGMPGTGKTST-------MVHAVKALLMR---GASILLTS 995
N+ Q RA+ LT + + L G PGTGKT T MV AV+ ++R +IL +
Sbjct: 320 NESQVRAVAASLT-RTFTLWQGPPGTGKTRTLLAFVEVMVRAVEGSVVRRHAQGAILAVA 378
Query: 996 YTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQ 1050
TN+A DNLL L ++ I VR+G+ V E++ CL A+ + ++ D
Sbjct: 379 DTNAAADNLLDGLLARGIRAVRVGQPAKVRPELRHACLEALVQSTPSGQRAARLRAGADV 438
Query: 1051 V--KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLP 1107
+VV TC G + L + F + ++DE Q T P SL PL+ ++ V+ GD QLP
Sbjct: 439 FLQQVVVATCNGAGDARLEAQCFRIVVLDECAQATEPSSLVPLVKGAQCVVMAGDQRQLP 498
Query: 1108 PLVQSTEARE-NGMEISLFRRLSEEHPQAISA--LQSQYRMCQGIMELSNALIYGDRLSC 1164
P V S A+E +++ LF RL E +S+ L+ QYRM I E + Y R+
Sbjct: 499 PTVVSERAKEMYHLDVPLFTRLLEG---GVSSRLLEVQYRMHPAISEFPSRHFYSGRVQS 555
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL--------- 1215
G + ++ PW NP PV+F+N E + Q L
Sbjct: 556 GVTQQDRPPVR------GVPW----TNPACPVLFINI-----AEGSEQQALAGNNRRGGS 600
Query: 1216 --------NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS------ 1261
+N EA + K Q +++ + + I +++PYN Q L+ LS +
Sbjct: 601 GDSSGASYSNSEEAEVAMKALQRVLQEDDSVQSIVLLSPYNGQVRLLTSLLSRAELPEGA 660
Query: 1262 ----SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+ + T+D YQGR+ D ++ S VRS+ R L D R+NVA+TRA++ LI+
Sbjct: 661 ADRCQITVSTVDGYQGRESDVVIFSTVRSNPAGR---VGFLSDERRLNVAITRARRGLIV 717
Query: 1318 VGSCRTLSKVPLLKLLINKVGEQ 1340
+G+ TL P + V EQ
Sbjct: 718 LGNQATLQHDPNWGAWMQWVAEQ 740
>gi|374586342|ref|ZP_09659434.1| AAA ATPase [Leptonema illini DSM 21528]
gi|373875203|gb|EHQ07197.1| AAA ATPase [Leptonema illini DSM 21528]
Length = 646
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/467 (28%), Positives = 217/467 (46%), Gaps = 80/467 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ +L D+A++ G PGTGKT+T+V A+ AL R S+L+ + TN+AVD L
Sbjct: 182 LNASQDEAVTGILNTPDFAVVHGPPGTGKTTTLVAAIAALYRREESVLVCAATNAAVDLL 241
Query: 1005 LIKLKSQSIDFVRIGRHEVVH------------------KEIQKHCLSAMNI-------- 1038
+KL Q I +RIG V+ K + K+ A +
Sbjct: 242 ALKLDEQGIPVLRIGHPARVYDAAQALTLEGRMESRSEAKLLAKYRAEAAQLFRQARRFR 301
Query: 1039 ----------------------NSVEEIKKR-----LDQVKVVAVTCLGITNPLLTDKKF 1071
++ E++K +++ VV T G ++P + +K+F
Sbjct: 302 RSFGAAERAERESLFAEYRALQKTIREMEKTALGDIIERTPVVCATLTGASHPSIREKRF 361
Query: 1072 DVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DEA Q P PL+ + ++ GDH QL PL++ + + +LF ++ E
Sbjct: 362 TTVVIDEATQALEPACYIPLLKNPERIIMAGDHQQLAPLIRLPA---SPLSETLFAKMIE 418
Query: 1131 EHPQA--ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
H + + L QYRM I+ SN Y RL + +++ + S L
Sbjct: 419 RHKDSGRVFFLNEQYRMQPVILGFSNQRFYEGRLVTHDSVLNRPPMRMKPEAEVS--LTG 476
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKD--HQTLNNPVEACLIAKITQELVK-NEIEGKDIGIIT 1245
+L +FV+T A E +D ++ N EA L+ +I + +++ E + + + +I
Sbjct: 477 SL------LFVDTAGSDATEEQDADSESRFNRFEAMLLVRIVERMLRLGEDDPESVALIA 530
Query: 1246 PYNSQANLIRHSLS-------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
PY +Q +L+R S ++E+ T+D +QG ++D I VSF R++E L
Sbjct: 531 PYRAQVDLLRSLCSDVATLPTGQAIEVDTVDSFQGAERDWIGVSFTRNNEE---AEIGFL 587
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
D R NVA+TRA+++LI+VG TLS P LI +S +
Sbjct: 588 KDLRRTNVAMTRARRRLILVGDSTTLSMHPFYADLIAYAQSESSYFS 634
>gi|282859892|ref|ZP_06268980.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|424899896|ref|ZP_18323438.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
gi|282587295|gb|EFB92512.1| putative DNA helicase [Prevotella bivia JCVIHMP010]
gi|388592096|gb|EIM32335.1| hypothetical protein PrebiDRAFT_0585 [Prevotella bivia DSM 20514]
Length = 637
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 213/455 (46%), Gaps = 78/455 (17%)
Query: 935 ALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLT 994
AL W LN Q +A+ +VL AKD A++ G PGTGKT+T+V A+ LMR +L+
Sbjct: 188 ALKLPW----LNPTQEKAVNEVLWAKDVAVVHGPPGTGKTTTLVEAINETLMRENQVLVC 243
Query: 995 SYTNSAVDNLLIKLKSQSIDFVRIGRHEVVH---------KEIQKHC------------- 1032
+ +N A+D + KL + I+ +RIG V+ + + H
Sbjct: 244 AQSNMAIDWISEKLVDRGINVLRIGNPTRVNDKMLGFTYERRFEAHSDYPQLWSLRKAIR 303
Query: 1033 -LSAMNINSVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFD 1072
L + +E ++LD++K VVA T + + ++ +KFD
Sbjct: 304 QLRSNRKRGLERFHEKLDRLKSRATELEIRINSELFSEARVVACTLVSANSRIMEGQKFD 363
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA Q P+ AS+ V GDH QLPP +++ A G+ +L R+ E
Sbjct: 364 TLFIDEAAQALEAACWIPIRRASRVVFAGDHCQLPPTIKNIAAMRAGLGKTLMERIVENK 423
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
P+ ++ L+ QYRM + IM S+ Y G E A S L P L L+
Sbjct: 424 PEVVTLLKVQYRMNEEIMRFSSDWFYH-----GEVESAPQIRYRSILDYDHPML--WLDT 476
Query: 1193 CRPVI----------FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ I FV + + TLN+ E KI ++ + + E D+G
Sbjct: 477 SKVDIGDDEVSFKEEFVGESFGRINKGEAELTLNSLQE--YFTKIGKQRILD--ESIDVG 532
Query: 1243 IITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
+I+PY +Q +R + + ++T+D +QG+++D IL+S VR+++ +
Sbjct: 533 VISPYRAQVQYLRKLIRKRKFFKPYRHLITVNTVDGFQGQERDVILISMVRANDEGQ--- 589
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
L D R+NVA+TRA+ KLI++G+ T++K P
Sbjct: 590 IGFLKDLRRMNVAITRARMKLIILGNAETMTKHPF 624
>gi|11191231|emb|CAC16347.1| putative helicase [Arabidopsis thaliana]
Length = 635
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 261/568 (45%), Gaps = 91/568 (16%)
Query: 828 DYVILSTESDRLA---VASGLITEISRFHVSVSFSKPLRLP--GRNSSSDADSLLHEVWR 882
D V+L L +A G++ + ++V F + +P G N+S + L +EV
Sbjct: 81 DVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDE---VPEEGLNTSLRLEKLANEV-- 135
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF-DSGSVFSQDPALSYIWS 941
++ M+ L+QL LR DL F + S+ S+
Sbjct: 136 --------TYRRMKDTLIQL-----SKGVLRGPASDLVPVLFGERQPSVSKKDVKSFTPF 182
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
K+L+ Q+ AI K L++KD L+ G PGTGKT+T+V V + RG+ IL + +N AV
Sbjct: 183 NKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAV 242
Query: 1002 DNLLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKH 1031
DN++ +L + VR+G R E+ K +
Sbjct: 243 DNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEM--KALNGK 300
Query: 1032 CLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFD 1072
L A + N+ I+K L D +K V+ T G L ++ FD
Sbjct: 301 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRTFD 360
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+ I+DE Q L+ S+ +L GDH QLPP +QS EA G+ +LF RL++ +
Sbjct: 361 LVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLY 420
Query: 1133 PQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
I S L QYRM + IM S+ +Y ++++ S ++ + +++ S EA
Sbjct: 421 GDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSST--EA-- 476
Query: 1192 PCRPVIFVNT-DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
++ V+T + + ++ N EA + + L+++ ++ DIGIITPY +Q
Sbjct: 477 ---TLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQ 533
Query: 1251 ANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
L+R + +EI T+D +QGR+K+ I++S VRS+ L D R+NV
Sbjct: 534 VMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLKDQRRMNV 590
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
A+TR++++ +V T+S LK +I
Sbjct: 591 AVTRSRRQCCIVCDTETVSSDAFLKRMI 618
>gi|338210831|ref|YP_004654880.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
gi|336304646|gb|AEI47748.1| type III restriction protein res subunit [Runella slithyformis DSM
19594]
Length = 636
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 216/465 (46%), Gaps = 87/465 (18%)
Query: 939 IWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYT 997
+S SLN Q+ A+ +L A + A++ G PGTGKT+T+V A+KAL+ +L+ + +
Sbjct: 176 FYSTPSLNPSQQSAVDSILRANELAVVHGPPGTGKTTTLVQAIKALVKTENQKVLVVAPS 235
Query: 998 NSAVDNLLIKLKSQSIDFV-------------------RIGRH----EVVHKEIQKHCLS 1034
N+AVD L KL + ++ + ++ H E + Q L
Sbjct: 236 NTAVDLLSEKLHEEGLNVLRVGNPARVTERLTALTLDSKMAEHPYMKEAKRLKKQAQELK 295
Query: 1035 AM----------------------------NINSVEE--IKKRLDQVKVVAVTCLGITNP 1064
AM + + E+ I L + +VV T +G +
Sbjct: 296 AMAHKYKRSFGKSERDQRKLLFVEAHRIMKEVGNTEQYIIDDLLVKAQVVTATLVGSNHY 355
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ + ++ ++DEAGQ P P++ A K +L GDH QL P ++S A + G+ +L
Sbjct: 356 TVREVRYHTVVIDEAGQALEPACWIPVLKAQKVILAGDHCQLSPTIKSEVAAKGGLSTTL 415
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
+ + HP+A++ L+ QYRM + IM S+ + Y +L + +A+ + D
Sbjct: 416 LEKCVDAHPEAVTLLEEQYRMNEQIMGYSSQIFYQHKLKAHAS-VAHRVLFTDD------ 468
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ------ELVKNEIEG 1238
+PV+F++T E + + NP EA L+ K E K +
Sbjct: 469 ---------KPVLFIDTAGCGFEEKLEGTSSTNPEEAALLLKHLGLLTAEWEAQKTDTSF 519
Query: 1239 KDIGIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENP 1290
I II PY Q +++ LS ++ + ++T+D +QG+++D + +S RS+
Sbjct: 520 PSIAIIAPYKQQIHVLAEQLSHVPELQPYLAHMAVNTVDSFQGQERDVVYISMTRSNS-- 577
Query: 1291 RNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ L D R+NVA+TRA+KKL++VG TL++ P I+
Sbjct: 578 -EGSIGFLADIRRMNVAMTRARKKLVVVGDSATLAQFPFYADFIS 621
>gi|421090780|ref|ZP_15551570.1| AAA domain protein [Leptospira kirschneri str. 200802841]
gi|410000366|gb|EKO50996.1| AAA domain protein [Leptospira kirschneri str. 200802841]
Length = 631
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 86/458 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ QR A++ + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQRNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------- 1039
+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 249 VESISARGISILRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFK 308
Query: 1040 ----------------SVEEIKKRLDQVKVVAVTCLGITNP------------LLTDKKF 1071
V+E+KK + +++ + L ++P +L ++ F
Sbjct: 309 RNFGEKEKEERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENRTF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 369 DFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNSLETTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L +QYRM + I+ + Y D L G E KE
Sbjct: 426 LESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPE------------------KEK 467
Query: 1190 LNPCRPVI----FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P + +++T + E + +++NP EA L ++ L +N+ ++I I++
Sbjct: 468 IPETFPFLNAFQWIDTAGTDSEEVIINDSISNPFEADLQVRLCFLLKENDWPEEEITILS 527
Query: 1246 PYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PY +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L +
Sbjct: 528 PYRAQVRLISEKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESR 584
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
RINV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 585 RINVGMTRARDLLLCIGDSSTLSQDPFLCKLIRFAEEK 622
>gi|18395518|ref|NP_565299.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|15027927|gb|AAK76494.1| putative helicase [Arabidopsis thaliana]
gi|20197343|gb|AAM15033.1| putative helicase [Arabidopsis thaliana]
gi|20197741|gb|AAD17447.2| putative helicase [Arabidopsis thaliana]
gi|20259169|gb|AAM14300.1| putative helicase [Arabidopsis thaliana]
gi|330250587|gb|AEC05681.1| putative DNA-binding protein [Arabidopsis thaliana]
Length = 639
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 261/568 (45%), Gaps = 91/568 (16%)
Query: 828 DYVILSTESDRLA---VASGLITEISRFHVSVSFSKPLRLP--GRNSSSDADSLLHEVWR 882
D V+L L +A G++ + ++V F + +P G N+S + L +EV
Sbjct: 85 DVVVLKLNKSDLGSSPLAQGVVYRLKDSSITVVFDE---VPEEGLNTSLRLEKLANEV-- 139
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF-DSGSVFSQDPALSYIWS 941
++ M+ L+QL LR DL F + S+ S+
Sbjct: 140 --------TYRRMKDTLIQL-----SKGVLRGPASDLVPVLFGERQPSVSKKDVKSFTPF 186
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
K+L+ Q+ AI K L++KD L+ G PGTGKT+T+V V + RG+ IL + +N AV
Sbjct: 187 NKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAV 246
Query: 1002 DNLLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKH 1031
DN++ +L + VR+G R E+ K +
Sbjct: 247 DNIVERLVPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEM--KALNGK 304
Query: 1032 CLSAMNINSVEEIKKRL----------------DQVK---VVAVTCLGITNPLLTDKKFD 1072
L A + N+ I+K L D +K V+ T G L ++ FD
Sbjct: 305 LLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKLDNRTFD 364
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+ I+DE Q L+ S+ +L GDH QLPP +QS EA G+ +LF RL++ +
Sbjct: 365 LVIIDEGAQALEVACWIALLKGSRCILAGDHLQLPPTIQSAEAERKGLGRTLFERLADLY 424
Query: 1133 PQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
I S L QYRM + IM S+ +Y ++++ S ++ + +++ S EA
Sbjct: 425 GDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLENVTKSSST--EA-- 480
Query: 1192 PCRPVIFVNT-DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
++ V+T + + ++ N EA + + L+++ ++ DIGIITPY +Q
Sbjct: 481 ---TLLLVDTAGCDMEEKKDEEESTYNEGEAEVAMAHAKRLMESGVQPSDIGIITPYAAQ 537
Query: 1251 ANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
L+R + +EI T+D +QGR+K+ I++S VRS+ L D R+NV
Sbjct: 538 VMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLKDQRRMNV 594
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
A+TR++++ +V T+S LK +I
Sbjct: 595 AVTRSRRQCCIVCDTETVSSDAFLKRMI 622
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 238/511 (46%), Gaps = 89/511 (17%)
Query: 888 IMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV-FSQDPALSYIWSEKSLN 946
+MT +S + L L A+ + R VD+ PR ++ SQD A+
Sbjct: 342 MMTDWSSLSAYLYFTILGRAEEAAKRFSEVDINLPRGRLSNLNSSQDTAV---------- 391
Query: 947 DDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDNLL 1005
R A+ LT LI G PGTGKTST V V + +R S IL+ + +N AVD L
Sbjct: 392 ---RTALRNPLT-----LIQGPPGTGKTSTSVAIVLEVNLRIRSQILVCAPSNVAVDQLA 443
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-VEEI------KKRLDQV------- 1051
++ + + VR+ H ++E+ + + ++S VEE +RL Q+
Sbjct: 444 ERISAAGLKTVRLHAH---YRELVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLELKLAG 500
Query: 1052 --------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
V+ TC+G + L +F ++DEA Q T P
Sbjct: 501 EVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQGTEP 560
Query: 1086 VSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
+L PL+ +K V LVGDH QL PLV S A G+ SLF RL +A+ L QYR
Sbjct: 561 ETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVR-LDVQYR 619
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML 1204
M + + Y L G E + D S PW +P RP+ F NT
Sbjct: 620 MHPALSLFPSDQFYEGTLQNGLTE------EQRDASRVFPWP----DPTRPIFFYNTTGS 669
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKN-EIEGKDIGIITPYNSQANLIRHSL----- 1258
A LN EA L +I +L+++ +++ DIG+ITPY Q + + L
Sbjct: 670 EELSANGSSYLNR-AEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGP 728
Query: 1259 ----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+ VE+ ++D +QGR+K+ I++S VRS N R ++ DW R+NV++TRAK+
Sbjct: 729 LPRTAYERVEVSSVDAFQGREKEFIILSCVRS--NHRQGIGFVV-DWRRLNVSITRAKRG 785
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LI++G+ + LS+ P L+ + E S +++
Sbjct: 786 LIIMGNVQLLSRYPAWHALLAHLMELSLVVD 816
>gi|224090282|ref|XP_002308965.1| predicted protein [Populus trichocarpa]
gi|222854941|gb|EEE92488.1| predicted protein [Populus trichocarpa]
Length = 647
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 216/461 (46%), Gaps = 77/461 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
L+ Q+ AI K L++K+ L+ G PGTGKT+T+V + + RG+ IL + +N AVDN+
Sbjct: 197 LDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAASNIAVDNI 256
Query: 1005 LIKLKSQSIDFVRIG------------------------------RHEV----------- 1023
+ +L + VR+G R E+
Sbjct: 257 VERLVPHRVKLVRLGHPARLLPQVLDSALDAQVLRGDNSALANDIRKEMKALNGKLLKTK 316
Query: 1024 ---VHKEIQKHCLSAMNINSVEEIKKR----LDQVK---VVAVTCLGITNPLLTDKKFDV 1073
++IQK + S EE K++ +D +K VV T G + L FD+
Sbjct: 317 DKSTRRDIQKE----LRTLSKEERKRQQLAVIDVIKNADVVLTTLTGAFSHKLNTTSFDL 372
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
I+DEA Q L+ S+ +L GDH QLPP +QS EA + G+ +LF RL++ +
Sbjct: 373 VIIDEAAQALEITCWLALLKGSRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLTDLYG 432
Query: 1134 QAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL---SSCSPWLKEA 1189
+ S L QYRM + IM S+ +Y ++ A+ + + SS P L
Sbjct: 433 DEVTSMLTVQYRMHELIMNWSSKELYNSKIKAHPSVAAHMLFDLEGVKRSSSTEPTL--- 489
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQ-TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+ V+ E KD + + N EA + + LV++ ++ DIGIITPY
Sbjct: 490 -------LLVDIAGCDMEEKKDEEDSTMNEGEAEVAVAHAKRLVQSGVQASDIGIITPYA 542
Query: 1249 SQANLIR----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+Q L+R + + +EI T+D +QGR+K+ I++S VRS+ L D R+
Sbjct: 543 AQVVLLRILKNNDDKLKDMEISTVDGFQGREKEAIIISMVRSNSKKE---VGFLSDHRRM 599
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
NVA+TRA+++ +V T+S LK LI E L+
Sbjct: 600 NVAVTRARRQCCLVCDTETVSGDGFLKRLIEHFEEHGEYLS 640
>gi|148643141|ref|YP_001273654.1| DNA2/NAM7 helicase family transcriptional regulator
[Methanobrevibacter smithii ATCC 35061]
gi|148552158|gb|ABQ87286.1| transcriptional regulator (enhancer-binding protein), DNA2/NAM7
helicase family [Methanobrevibacter smithii ATCC 35061]
Length = 658
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 154/269 (57%), Gaps = 28/269 (10%)
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF+V I+DEA Q T+P L PL A +F+L GDH QLPP + S +A + +E +LF L
Sbjct: 379 KFNVVIVDEASQATIPSILIPLSKARRFILAGDHKQLPPTIISKKA--HFLEKTLFEELI 436
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS-------DEIAN----AKIKVSD 1178
+++P S L QYRM +M+ N+ Y L S DEI + +++K SD
Sbjct: 437 KKYPNKASLLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINLDEIIDSEELSRLKESD 496
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEA---KDHQTLNNPVEACLIAKITQELVKNE 1235
+ K+ N +P++F++T L E KD +++ N EA + I + +
Sbjct: 497 VE------KQLHNNLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEAAIATSIAKFYLGTG 550
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I KDIGII+PY Q NLI+ + +E+ ++D +QGR+K+ I++S VRS+ +N
Sbjct: 551 INPKDIGIISPYADQVNLIQDKI---PIEVKSVDGFQGREKEIIIISTVRSN---KNGNI 604
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
L D R+NVA+TRAK+KLI++G+ TL
Sbjct: 605 GFLKDLRRLNVAITRAKRKLIVIGNKNTL 633
Score = 60.5 bits (145), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 119/256 (46%), Gaps = 33/256 (12%)
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
++ ++ + GD V++ST + +G + E + V+F K +
Sbjct: 64 SEKIETEISVGDMVLISTGYPLRSDLTGTVVEKGARFIKVAFEKSI----------PKWA 113
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
L + RID +F M NL+ L + + + S+ +DP
Sbjct: 114 LKKKVRIDLYANDVTFRRMEDNLLHLNTKGKNALEY---------------SLKKRDPKE 158
Query: 937 S----YI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ YI + +KSLN+ Q+ A+ + +++ LI G GTGKT T+V ++ + + +
Sbjct: 159 NKKEKYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQNNKV 218
Query: 992 LLTSYTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLS--AMNINSVEEIKKRL 1048
L+T+ +NSAVDN+L +L +++ + R+G + V KE + L+ A N +I K
Sbjct: 219 LVTAESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENITYSLAYKAENHQLTGKINKNY 278
Query: 1049 DQVKVVAVTCLGITNP 1064
+++ ++ T T P
Sbjct: 279 KRIEQISETRDRFTKP 294
>gi|313148991|ref|ZP_07811184.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|424664802|ref|ZP_18101838.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW 616]
gi|313137758|gb|EFR55118.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|404575335|gb|EKA80078.1| hypothetical protein HMPREF1205_00677 [Bacteroides fragilis HMW 616]
Length = 656
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 215/456 (47%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V AV L R +L+ + +N+AVD +
Sbjct: 214 LNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQVLVCAQSNTAVDWI 273
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQK--HCLSAMN 1037
KL + + +RIG R E + K I+ H +
Sbjct: 274 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDMGHHMRKGG 333
Query: 1038 INSVEEIKKRLDQVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ E + R+ ++K V+A T + + +LT + F +DE
Sbjct: 334 YSERESTRNRILRLKERATELEILINEDLFSSARVIASTLVSSNHRILTGRHFSSLFIDE 393
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH QLPP ++ EA +G++ +L ++ +A+S
Sbjct: 394 AAQALEAACWIAIRKADRVILAGDHCQLPPTIKCMEAARSGLDRTLMEKVVMNKQEAVSL 453
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM+ +A Y L + EI++ I D P+ +
Sbjct: 454 LKIQYRMHRSIMQFPSAWFYQGELE-AAPEISHRGILELDT---------------PINW 497
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 498 IDTSEMDFHEEFVGESFGRINKP-EANLLLQELENYIRKIGENRVAEECIDFGLISPYKA 556
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R+ + S + ++T+D +QG+++D I +S VR++EN + L D
Sbjct: 557 QVQYLRNKIKGNPFFRPYRSRITVNTVDGFQGQERDVIFISLVRANENGQ---IGFLNDL 613
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK + LI +
Sbjct: 614 RRMNVAITRARMKLVILGDATTMSKHAFYRKLIEYI 649
>gi|408674036|ref|YP_006873784.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
gi|387855660|gb|AFK03757.1| AAA ATPase [Emticicia oligotrophica DSM 17448]
Length = 634
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 217/452 (48%), Gaps = 91/452 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS---ILLTSYTNSAV 1001
LND Q A+ K+++A + A++ G PGTGKT+T+V +K ++ + + IL+ + +N+AV
Sbjct: 178 LNDSQNNALNKIISANELAIVHGPPGTGKTTTLVQTIKTIIKQENAKTPILVVAPSNTAV 237
Query: 1002 DNLLIKLKSQSIDFV-------------------RIGRHEVVH--KEIQKHCLSAMN--- 1037
D L KL + ++ + ++ H+++ K ++K N
Sbjct: 238 DLLSEKLSEEGLNVLRIGNPARVSERLMALTLDNKMTDHQLMKNAKTLKKQANEYRNMAH 297
Query: 1038 ---------------------------INSVEE--IKKRLDQVKVVAVTCLGITNPLLTD 1068
+ ++E+ I + + +++ T +G + + +
Sbjct: 298 KYKRSFGKAERDQRKLLFDEAHKIMKEVGNIEQYVIDDVVTKTQIITATLVGANHYTIRN 357
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
F I+DEAGQ P P++ A K + GDH QLPP ++S EA +NG+ +L +
Sbjct: 358 LSFHTVIIDEAGQALEPACWIPILKAQKVIFAGDHCQLPPTIKSNEAAKNGLNTTLLEKC 417
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
HP+A++ L+ QYRM + IM S+ + Y ++L + +A + V +
Sbjct: 418 VALHPEAVTLLEEQYRMNEQIMAHSSKVFYNNQLKAHAS-VAKQTLFVDE---------- 466
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK-------DI 1241
+P+ F++T E + + NP EA + K V+ E++ K I
Sbjct: 467 -----KPLHFIDTAGCSFDEKLEGTSSTNPDEAAFLVKHLNGFVE-ELKKKFSTANFPSI 520
Query: 1242 GIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
+I+PY Q ++++ + ++++ ++TID +QG+++D + +S RS+
Sbjct: 521 AVISPYKQQISILKEQVEHAPELKEVLNNISVNTIDSFQGQERDIVYISLTRSNA---EG 577
Query: 1294 TSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
L D R+NVA+TRA+KKLI++G TLS
Sbjct: 578 AIGFLSDIRRMNVAMTRARKKLIVIGDSATLS 609
>gi|412993880|emb|CCO14391.1| predicted protein [Bathycoccus prasinos]
Length = 1285
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 208/436 (47%), Gaps = 66/436 (15%)
Query: 930 FSQD-PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM-R 987
+QD PA+ ++ KS ++ R A+ + +T LI G PGTGKT T V V+ L R
Sbjct: 718 MAQDIPAMQHM--NKSQHEALRAALFQRIT-----LIQGPPGTGKTHTAVALVQMWLKCR 770
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-------NINS 1040
IL TS +N AVDNL+ L + RIGR E V +++ + ++ N++
Sbjct: 771 TMPILCTSDSNIAVDNLVDGLSRAGVRVARIGRPEAVRQDLMPFMVESIAGIEPGSNMSK 830
Query: 1041 VEE---IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK- 1096
++ I L + +V+ TC G + +L F C++DEA Q T P ++ P+ K
Sbjct: 831 DQQYQAINGVLRRAEVICATCAGAGSDILERFSFAACLIDEATQATEPATVVPMTKGCKQ 890
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
VL+GD QLPP + S +A E G+ SLF R+ + L+ QYRM I + +
Sbjct: 891 IVLIGDQNQLPPTIISRDADERGLGTSLFERMLSRGIRTF-MLKVQYRMHPAIAKFPSQQ 949
Query: 1157 IYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN------PCRPVIFVNTDMLPAYEAK 1210
Y + L LS P + A P P+ FV D E
Sbjct: 950 FYSNEL----------------LSGTPPSQRRAPQGFDWPVPAVPLAFV--DCPEGEERS 991
Query: 1211 DHQTLNNPVEACLIAKITQELV-KNEIEGKDIGIITPYNSQANLIRHSLSVSSV------ 1263
D + N +EA + + ++L+ ++E+ DIGI++PY +Q I+ L ++V
Sbjct: 992 DGASQMNTIEAQKVVTLVKKLMAEHEVLACDIGIVSPYAAQVRAIKKLLQPNAVKRTRFD 1051
Query: 1264 -----------EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
E+ +ID +QGR+K+ I+ S R++ L D R+NV LTRA+
Sbjct: 1052 APAAPDSDAAIEVCSIDGFQGREKEVIVFSCTRAN---LMGNVGFLADRRRVNVMLTRAR 1108
Query: 1313 KKLIMVGSCRTLSKVP 1328
+ LI+VG RTL P
Sbjct: 1109 RGLIIVGHLRTLRGEP 1124
>gi|303390879|ref|XP_003073670.1| DNA helicase [Encephalitozoon intestinalis ATCC 50506]
gi|303302817|gb|ADM12310.1| DNA helicase [Encephalitozoon intestinalis ATCC 50506]
Length = 926
Score = 164 bits (415), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 187/393 (47%), Gaps = 85/393 (21%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQR A+ L K+Y +I GMPGTGK++ + +K L+ +LL YTN A+ N+
Sbjct: 615 LNDDQRSALFLSLNCKNYRIIHGMPGTGKSTLICLLIKILVYLKKKVLLICYTNLALANI 674
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
KL I G+ K + EE K D +++V TC ++P
Sbjct: 675 TKKL--SGIRVYTAGKEGFFFK-------------TTEEAKLFFDNIELVVGTCFSFSDP 719
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ +++FD C++DE Q L ++L P+ +SKFV+VGDH QL PL + ++ + ISL
Sbjct: 720 IYLNRRFDFCVVDEGSQMHLLLTLIPISISSKFVIVGDHLQLKPLSRCSK----DLSISL 775
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L + S L++QYRM IM LSN L Y ++L
Sbjct: 776 FEYL---LGKDYSKLRTQYRMGNEIMRLSNTLFYSNQL---------------------- 810
Query: 1185 WLKEALNPCRP--VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
L RP V F++TD++ D L E C
Sbjct: 811 -----LGEKRPSKVEFIDTDII------DFMALVPSFEKC-------------------T 840
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
I+ +N+Q + IR ++ + T+D++QG + D ++V F S+ ++
Sbjct: 841 ILCYFNAQVDTIRE---MTRCIVETVDRFQGSESDKVVVVFDPISK------CEVMESSE 891
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R+NVALTRAKK L++ GS + ++ +LK LI+
Sbjct: 892 RLNVALTRAKKHLVLAGSRTKMMEIDILKRLIS 924
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 45/251 (17%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---KCSERSISALLGTLLHQIFQ 494
V N+L++ D +S T + S SC + ++ ++ + S + L+G ++H + +
Sbjct: 167 VTNTENYLLIEDDP-ISITTLCESLSCKNKRYINTKIASIRFSYTDLRVLIGVVVHSVME 225
Query: 495 AGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQ 554
L++ + FL + + KN+ ++ CG++E +T + K++ I LF+D +
Sbjct: 226 KALVERNFSFDFLTRQTKAKISKNVALMHRCGIDE----RTALNESLKLIKNIYLFRDHR 281
Query: 555 DLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMIL 614
EV + E+ + + +KG DA G
Sbjct: 282 -------------------FEVVETEKKLMSLLFNIKGNADAI-------------GEDS 309
Query: 615 PLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDL 674
LE K+ K EHRAQVILY L++ E+ + S LYY+ + + V ++ ++
Sbjct: 310 VLEIKSTK----SQRAEHRAQVILYALMLREKTGRDF-SPCLYYIPTREMVEVKLKHQEI 364
Query: 675 VGLIMRRNEFA 685
L+ RN+ A
Sbjct: 365 RSLLNLRNKIA 375
>gi|300708950|ref|XP_002996645.1| hypothetical protein NCER_100239 [Nosema ceranae BRL01]
gi|239605962|gb|EEQ82974.1| hypothetical protein NCER_100239 [Nosema ceranae BRL01]
Length = 952
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/390 (29%), Positives = 183/390 (46%), Gaps = 80/390 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN++Q+ A+ L ++Y ++ GMPGTGK+S +V +K L+ +LL YTN A+ N+
Sbjct: 637 LNENQKAALYSALNCENYKIVHGMPGTGKSSVIVLLIKILVYLNKKVLLVCYTNLAITNI 696
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L +LK+ +R R C +N +SV+EIK V +VA TC G +P
Sbjct: 697 LSRLKT-----IRSYRA----------CKENINFSSVQEIKTYFRNVDLVASTCFGFRDP 741
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ ++ FD CI+DE Q L ++L P+ KFV+ GDH QL PL +S + +SL
Sbjct: 742 IFLERSFDYCIIDEGSQQHLLLTLIPISLCQKFVIFGDHLQLKPLSKSC----TDLNMSL 797
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L + + S L QYRM IM LSN L Y +L G
Sbjct: 798 FEYLLDVNH---SELTIQYRMGPNIMRLSNELFYDGKLQLG------------------- 835
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
+++ + V C I T E K + D I+
Sbjct: 836 ----------------------------RSIEDSV--CFIDSSTIEYSKFIKDVYDTTIL 865
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+NSQ + + ++ ++ T+D++QG + + I+V F +P ++ R+
Sbjct: 866 CYFNSQVKITKE---LTDCQVETVDRFQGSEANNIIVVF-----DPV-VKCDVIESKERL 916
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
NVALTRAK+ LI++G + + +L L+
Sbjct: 917 NVALTRAKRSLILIGDLTKMKDIYILNRLL 946
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 57/272 (20%)
Query: 438 VGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---------KCSERSISALLGTL 488
V E N+L + D+L + T + +S C L+ ++ KC + G +
Sbjct: 123 VNDEENYLFIEDDLL-TITNLVSSIRCINNPYLNGKIADIGFTFNDKC------LVNGII 175
Query: 489 LHQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWII 548
LH+I + ++ + + ++ + ++KN+ ++Y C +E K + + I ++ II
Sbjct: 176 LHEIMEDCILNQNFKLSYITKSISAGIKKNLMNIYCCNTSE----KVVRDDITSLIGNII 231
Query: 549 LFKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNE 608
F N + F + E+ + LKG +DA V +E+
Sbjct: 232 SF------NKQNLVFN-------------ECEKRIASLSMNLKGNVDA---VGLENN--- 266
Query: 609 INGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVM 668
+ LE K+GK + H+AQVILY+L++ E+Y + S L+Y+ ++ V
Sbjct: 267 -----IVLEIKSGK----SMDISHKAQVILYSLILKEKYRTNFQS-YLFYITANNFVNVD 316
Query: 669 VQRSDLVGLIMRRNEFA--NDIIKASTTQQLP 698
++ S++ L++ RN+ A N I S + P
Sbjct: 317 IKHSEVKSLMILRNKLAMHNSITNCSCCEYDP 348
>gi|390945185|ref|YP_006408946.1| type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
gi|390418613|gb|AFL86191.1| Type III restriction enzyme, res subunit [Belliella baltica DSM
15883]
Length = 643
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 214/472 (45%), Gaps = 93/472 (19%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+ LN Q +A+ + + D A+I G PGTGKT+T++ A++ +L +L+ + +N+AVD
Sbjct: 181 QELNPAQNQALRLINQSDDVAIIHGPPGTGKTTTLIAAIQNILKTNRQVLVCAPSNAAVD 240
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQVK----- 1052
L+ KL + + +RIG V +I L A + +++++K +D+ +
Sbjct: 241 LLVEKLVDKGVPTLRIGHPARVDDKILAQTLDAKIASHESYKDLKKLRKSVDEYRKLGRK 300
Query: 1053 -------------------------------------------VVAVTCLGITNPLLTDK 1069
V A T +G +N L
Sbjct: 301 YKRNFGHEERVQRKRLLDEAGRMKEDADILENYIMYDVFQMTQVFASTLVGSSNQALKGI 360
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
F +DEAGQ + P+M A K V+ GDH QLPP ++S EA + G+ +LF ++
Sbjct: 361 DFPYVFIDEAGQGLEAATWIPIMKAEKVVMTGDHLQLPPTIKSYEAAKAGLSETLFEKVI 420
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ P+A L QYRM + IM S+ L Y + L N I
Sbjct: 421 KRQPEASKMLTVQYRMPEKIMGFSSKLFYKNNLEAA----VNTHIHF------------- 463
Query: 1190 LNPCRPVI-FVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKN------EIEGKD 1240
L V+ F++T E ++ ++L+ N EA K + L+K + EG +
Sbjct: 464 LTEEESVLEFIDTAGSGFSEHQEKESLSTLNAEEAKFTLKYLENLLKRVGIGKIKTEGWN 523
Query: 1241 IGIITPYNSQA----NLIRHSLSVSSVE-------IHTIDKYQGRDKDCILVSFVRSSEN 1289
IG+I+PY +Q LI S ++ I +ID +QG+++D I +S VRS+
Sbjct: 524 IGLISPYRAQVRKFQELIFESYEYPNLRSFSELLTIDSIDGFQGQERDIIFISLVRSNA- 582
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
N L D R+NVALTRAK+KL+++G TLS +N V E+
Sbjct: 583 --NGEIGFLSDTRRMNVALTRAKRKLVVIGDSSTLSSNDFYNAFLNYVEEKG 632
>gi|302392833|ref|YP_003828653.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
gi|302204910|gb|ADL13588.1| DNA helicase [Acetohalobium arabaticum DSM 5501]
Length = 747
Score = 164 bits (415), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 160/306 (52%), Gaps = 11/306 (3%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E + L VV T + +L + D+ ++DEA Q T P L PL + VL G
Sbjct: 442 EAVNDLLSTADVVCTTNSTAGSEVLDNFWADLLVVDEATQATEPAVLIPLTKTDRVVLAG 501
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAI-SALQSQYRMCQGIMELSNALIYGD 1160
DH QLPP + S A++ G+ +LF RL + + I L+ QYRM IM SN Y
Sbjct: 502 DHKQLPPTILSERAKQQGLNYTLFERLIDMYGAKIRQMLRVQYRMNDLIMNFSNREFYNG 561
Query: 1161 RLSCGSDEIAN---AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML--PAYEAKDHQTL 1215
L +D I A + VS + P K AL +P+ F +T + P D ++
Sbjct: 562 LLES-ADGIGGHTLADLDVSAPNGSRPAEK-ALVFDQPIAFFDTQGMNAPERSKSDSTSV 619
Query: 1216 NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRD 1275
NP+EA L+ +I + + + +DI +I PY Q LI L + VE++T+D +QGR+
Sbjct: 620 ENPIEADLVIEIAEVAKQLDFAEEDIAVIAPYKDQVELIDDKLDLQGVEVNTVDGFQGRE 679
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
K+ I++SFVRS+E L D R+NV+LTRAK+KLIM+G T++ + + LI
Sbjct: 680 KEVIILSFVRSNE---YGNIGFLRDLRRLNVSLTRAKRKLIMIGDASTITSNEVYERLIE 736
Query: 1336 KVGEQS 1341
V ++
Sbjct: 737 YVTDEG 742
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 821 DCTLRSGDYVILSTESD-RLAVASGLITEISRFHVSVSFSK--PLRLPGRNSSSDADSLL 877
D + GD V+LS R +G + E +++ ++V F + P + G+ AD +
Sbjct: 156 DSEISVGDLVMLSKNQPLRDDNPTGTVAEKTKYSITVVFDENPPGFIFGKGLR--ADLYV 213
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+++ +F M + ++ + ++LR + LE F QD +
Sbjct: 214 NDI----------TFQRMLDAITEVEEAEGRLAELRDKFLGLEDIEF-----AEQDSDVE 258
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
+ ++LN Q++A+ + + A+D+ L+ G PGTGKT T + ++ + +IL T+ +
Sbjct: 259 F--KNQNLNQSQKQAVRQAMAAEDFFLVHGPPGTGKTMTSIEIIRQEIGPDKNILATADS 316
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
N+AVDNL+ +L ++ VR+G V +++H L +
Sbjct: 317 NTAVDNLVERLVRDDVEVVRVGHPVRVTPVLREHTLDYL 355
>gi|456865626|gb|EMF83960.1| AAA domain protein [Leptospira weilii serovar Topaz str. LT2116]
Length = 637
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 127/454 (27%), Positives = 212/454 (46%), Gaps = 75/454 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ QR+A + + ++D +I G PGTGKT+T+ V L+ G +L+++ T+SA D L
Sbjct: 189 LNESQRKAALNAVLSEDVTIIHGPPGTGKTTTLTEIVSQLVAEGKRVLVSAPTHSACDLL 248
Query: 1005 LIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKHC 1032
+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 249 VESISTRGISVLRLGHPARISDAALHTTLDYKLFYHPDGKLLSEYRRDVIEISKQAKKYK 308
Query: 1033 LSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKKF 1071
+ V+E+KK + ++ VV T + +L ++F
Sbjct: 309 RNFGEKEREERKNLFQEVKELKKTIRSMEKGLIDSLVSSHPVVVSTPVASARSVLEGRQF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP S + +N +E +LF + +E
Sbjct: 369 DFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPP---SLFSEKNSLEFTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L QYRM I + Y +RL G ++S+ P+ A
Sbjct: 426 LETSGRVFLLDIQYRMKDEISFFPSMEFYSNRLKSGRP----GPERISNFPETFPF-GNA 480
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
L +++T + E +L NP EA L + L++N ++I +++PY +
Sbjct: 481 LQ------WIDTAGTDSEEVAVDDSLTNPFEADLQVCLCTLLLENNWSEEEITVLSPYRA 534
Query: 1250 QANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RINV
Sbjct: 535 QVRLISEKLREAGLTKIGVSTIDSFQGRENRCILLGFVRSNSEGR---SGFLKESRRINV 591
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+TRAK LI +G TL + P L LI V ++
Sbjct: 592 GMTRAKDLLICIGDSSTLLEDPFLSRLIRFVEDK 625
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA reducing
factor 1, putative [Trypanosoma cruzi marinkellei]
Length = 839
Score = 164 bits (414), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 141/454 (31%), Positives = 217/454 (47%), Gaps = 71/454 (15%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVD 1002
+LN Q A+ L LI G PGTGKTST V V+ L R S IL+ + +N AVD
Sbjct: 382 NLNSSQDAAVRTALR-NPLTLIQGPPGTGKTSTSVAIVRELHRRTHSQILVCAPSNVAVD 440
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-VEE----------IKKRLDQ- 1050
L ++ + + VR+ H ++E+ + + ++S VEE +K+ LD
Sbjct: 441 QLAERISATGLKTVRLQAH---YREVVPSSVKHLGLDSQVEEFIASSNGNRTLKQLLDMR 497
Query: 1051 ----------------------------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
V+ TC+G + L +F ++DEA Q
Sbjct: 498 LAGKALGEQDIKVYNDGVRDIEEMLLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQG 557
Query: 1083 TLPVSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P +L PL+ +K V L+GDH QL P+V S G+ SLF RL +A+ L
Sbjct: 558 TEPETLVPLVRGAKQVFLLGDHCQLRPIVFSLPVERAGLRRSLFERLLLTGHRAVR-LDV 616
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT 1201
QYRM + + Y L G E + D S PW +P RP+ F NT
Sbjct: 617 QYRMHPALSLFPSDQFYEGTLQNGLTE------EQRDASQVFPWP----DPTRPIFFYNT 666
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKN-EIEGKDIGIITPYNSQANLIRHSL-- 1258
A LN EA L +I +L+++ +++ DIG+ITPY Q + + L
Sbjct: 667 TGSEEVSANGSSYLNR-AEAALTERIITKLIQDGKVKPDDIGVITPYGGQCRYLMNYLLR 725
Query: 1259 -------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
+ SVE+ ++D +QGR+K+ I++S VRS N R ++ DW R+NV++TRA
Sbjct: 726 CGPLPKTAYESVEVSSVDAFQGREKEFIILSCVRS--NHRQGIGFVV-DWRRLNVSITRA 782
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
K+ LI++G+ + LS+ P+ L+ + E S +++
Sbjct: 783 KRGLIIMGNVQLLSRYPVWHALLAHLMELSLVVD 816
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA reducing
factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 155/511 (30%), Positives = 238/511 (46%), Gaps = 89/511 (17%)
Query: 888 IMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSV-FSQDPALSYIWSEKSLN 946
+MT ++ + L L A+ + R VD++ PR ++ SQD A+
Sbjct: 342 MMTDWASLSAYLYFTILGRAEEAAKRFSEVDIDLPRGRLSNLNSSQDTAV---------- 391
Query: 947 DDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDNLL 1005
R A+ LT LI G PGTGKTST V V + R S IL+ + +N AVD L
Sbjct: 392 ---RTALRNPLT-----LIQGPPGTGKTSTSVAIVLEVNRRIRSQILVCAPSNVAVDQLA 443
Query: 1006 IKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-VEEI------KKRLDQV------- 1051
++ + + VR+ H ++E+ + + ++S VEE +RL Q+
Sbjct: 444 ERISAAGLKTVRLHAH---YREVVPSSVKHLGLDSQVEEFIASSSGNRRLRQLLELKLAG 500
Query: 1052 --------------------------KVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
V+ TC+G + L +F ++DEA Q T P
Sbjct: 501 EVLDEQEQKIYNDSVRDIEEALLGGADVICCTCIGAADRRLGKMRFQYVLIDEATQGTEP 560
Query: 1086 VSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYR 1144
+L PL+ +K V LVGDH QL PLV S A G+ SLF RL +A+ L QYR
Sbjct: 561 ETLVPLVRGAKQVFLVGDHCQLRPLVFSLPAERAGLRRSLFERLLMTGHRAVR-LDVQYR 619
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML 1204
M + + Y L G E + D S PW +P RP+ F NT
Sbjct: 620 MHPALSLFPSDQFYEGTLQNGLTE------EQRDASRVFPWP----DPTRPIFFYNTTGS 669
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKN-EIEGKDIGIITPYNSQANLIRHSL----- 1258
A LN EA L +I +L+++ +++ DIG+ITPY Q + + L
Sbjct: 670 EELSANGSSYLNR-AEAALTERIITKLIRDGKVKPDDIGVITPYGGQCRYVMNYLVRCGP 728
Query: 1259 ----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+ VE+ ++D +QGR+K+ I++S VRS N R ++ DW R+NV++TRAK+
Sbjct: 729 LPRTAYERVEVSSVDAFQGREKEFIILSCVRS--NHRQGIGFVV-DWRRLNVSITRAKRG 785
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQSGILN 1345
LI++G+ + LS+ P L+ + E S +++
Sbjct: 786 LIIMGNVQLLSRYPAWHALLAHLMELSLVVD 816
>gi|294506246|ref|YP_003570304.1| DNA helicase [Salinibacter ruber M8]
gi|294342574|emb|CBH23352.1| Putative DNA helicase [Salinibacter ruber M8]
Length = 766
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 164/314 (52%), Gaps = 19/314 (6%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E I + L VV T + LL FD ++DEA Q T P P+ A + VLVG
Sbjct: 454 EAIDEVLRAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPSCWIPMTHARRAVLVG 513
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEH------PQAI-SALQSQYRMCQGIMELSN 1154
DH QLPP +Q+ EA G+ +LF RL+ H P +I S L+ QYRM + IM N
Sbjct: 514 DHKQLPPTIQNQEAARRGLRRTLFERLAHHHETAPESPGSIRSLLRRQYRMHETIMGFPN 573
Query: 1155 ALIYGDRLSCGSDEIAN----AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML--PAYE 1208
Y RL D+ A A + V + + + + L+P P++FV+T + P ++
Sbjct: 574 RTFYDGRLEA--DDTARHRTLAGLGVPEHALPADERRAILDPEAPLVFVDTSGIDAPEHQ 631
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTI 1268
+ NP EA LIA++T L++ + I +I+PY+ Q + I +L+ E T+
Sbjct: 632 RSGSHSRENPREADLIAQLTTALLEAGMAPSAIAVISPYDDQVDRIDRALAPDGPETDTV 691
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
D +QGR+K+ +L+S VRS N R L + R NVA+TRA++K ++VG T++
Sbjct: 692 DGFQGREKEIVLLSLVRS--NDRGAI-GFLDEPRRFNVAVTRAERKAVVVGDASTVAAAD 748
Query: 1329 LLKLLINKVGEQSG 1342
+L + + E +G
Sbjct: 749 VLGAFV-RYAETTG 761
Score = 93.6 bits (231), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 821 DCTLRSGDYVILS-TESDRLAVASGLITEISRFHVSVSFS-KPLR-LPGRNSSSDADSLL 877
D +R GD V++S T+ R +G +T+++ + ++ SF KP + G+ D +
Sbjct: 156 DHEIRVGDLVMISKTDPLRDDNPTGTVTQVTNYSITASFDPKPDGWVFGKGLRPDRREEV 215
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
R+D + M+ L QL QLR + + +P + +PA
Sbjct: 216 VSGLRVDLYVNDIPYQRMQDALAQLPTADGALKQLRDVSTGVASP-------AATEPATI 268
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
W +LND QRRA+ K + D LI G PGTGKT+T ++ + RG S+L T+ +
Sbjct: 269 DDWHNSALNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDRGESVLATAAS 328
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA 1035
N+AVDN++ L Q D VR+G V+ ++ H L A
Sbjct: 329 NTAVDNVVAFLAEQGTDVVRLGHPARVNDRLRTHTLDA 366
>gi|298385061|ref|ZP_06994620.1| DNA helicase [Bacteroides sp. 1_1_14]
gi|298262205|gb|EFI05070.1| DNA helicase [Bacteroides sp. 1_1_14]
Length = 651
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/475 (26%), Positives = 217/475 (45%), Gaps = 83/475 (17%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 194 TQKPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 253
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN--------- 1039
+L+ + +N+AVD + KL + + +RIG V+ ++ N
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFENHPSYPELWG 313
Query: 1040 ---SVEEIKKRL----------------------------------DQVKVVAVTCLGIT 1062
S+ E+ R+ D +V+A T +
Sbjct: 314 IRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSN 373
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA G++
Sbjct: 374 HRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDH 433
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
+L ++ ++ P A+S L+ QYRM + IM + Y L + E+ N I
Sbjct: 434 TLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEA-APEVRNRGI-------- 484
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNEI 1236
L+ P+ +++T + +E ++ N EA L+ + + + K I
Sbjct: 485 -------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYISRIGKARI 537
Query: 1237 --EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRS 1286
E D G+I+PY +Q +R + SS + ++T+D +QG+++D + +S VR+
Sbjct: 538 LDESIDFGLISPYKAQVQYLRSKIRGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRA 597
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
+E+ + L D R+NVA+TRA+ KL+++G TL+K + LI + + S
Sbjct: 598 NEDGQ---IGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLITYIKQSS 649
>gi|380696742|ref|ZP_09861601.1| helicase [Bacteroides faecis MAJ27]
Length = 652
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 223/477 (46%), Gaps = 86/477 (18%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 194 TQKPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 253
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV--------- 1023
+L+ + +N+AVD + KL + + +RIG R E
Sbjct: 254 PQVLVCAQSNTAVDWICEKLADRGVAVLRIGNPTRVNDKMLSSTYERRFESHPAYPELWG 313
Query: 1024 VHKEIQKHCLSAMNINSVEE---IKKRL-------------------DQVKVVAVTCLGI 1061
+ K I++ S M S E ++ R+ D +V+A T +
Sbjct: 314 IRKSIREMG-SRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSS 372
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA G++
Sbjct: 373 NHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLD 432
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+L ++ ++ P A+S L+ QYRM + IM + Y L + E+ N I
Sbjct: 433 HTLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEA-APEVRNRGI------- 484
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNE 1235
L+ P+ +++T + +E ++ N EA L+ + + + K
Sbjct: 485 --------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYINRIGKTR 536
Query: 1236 I--EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVR 1285
I E D G+I+PY +Q +R + +S + ++T+D +QG+++D I +S VR
Sbjct: 537 ILDERIDFGLISPYKAQVQYLRSKIRGNSFLRPFRSLITVNTVDGFQGQERDVIFISLVR 596
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
++E+ + L D R+NVA+TRA+ KL+++G TL++ P + L+ + QSG
Sbjct: 597 ANEDGQ---IGFLNDLRRMNVAITRARMKLVILGDATTLAQHPFYRKLMQYI-RQSG 649
>gi|312137189|ref|YP_004004526.1| DNA helicase [Methanothermus fervidus DSM 2088]
gi|311224908|gb|ADP77764.1| DNA helicase [Methanothermus fervidus DSM 2088]
Length = 666
Score = 163 bits (413), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 173/312 (55%), Gaps = 29/312 (9%)
Query: 1039 NSVEEIKKRL-----DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
N ++EI+ R+ ++ VV T + L D +FDV I+DEA Q T+P L PL
Sbjct: 346 NKIDEIENRIVENIIEESDVVLSTNSSVYLEYLRDVEFDVVIVDEASQATIPSVLIPLSR 405
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A +F+L GDH QLPP + + +A+E +E +LF L ++P L+ QYRM +ME
Sbjct: 406 APRFILAGDHRQLPPTILNPDAKE--LEKTLFSILISKYPSKSHMLEYQYRMNPKLMEFP 463
Query: 1154 NALIYGDRLSCGS-------DEIANAKIKVSDLSSCSPWLKEALNPCR-PVIFVNT-DML 1204
N Y ++ + ++ +IK +LS L+E L R P+ F++T D+
Sbjct: 464 NNEFYNGKIKSAAGLEKLSPKDLIKKEIKDENLSK---ELQEML--IRDPLTFIDTCDLD 518
Query: 1205 PAYEA--KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS 1262
+E K +L NP+EA + I +K+ + DIGIITPY+ Q + + ++
Sbjct: 519 NKFERRFKGSPSLYNPLEADICILIQNFFIKSGVSTDDIGIITPYDDQVDYLS---KIAK 575
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCR 1322
VE++T+D YQGR+K+ I++S VRS+ + L D R+NV+LTRAK+KL+++G
Sbjct: 576 VEVNTVDGYQGREKEIIIISMVRSN---KKGKIGFLEDLRRLNVSLTRAKRKLVIIGDSE 632
Query: 1323 TLSKVPLLKLLI 1334
TLS P + LI
Sbjct: 633 TLSVHPSYRRLI 644
Score = 64.3 bits (155), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 6/115 (5%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+K LN+ Q AI K L KD+ LI G GTGKT T++ +K + RG +L+T+ +N AV
Sbjct: 174 DKKLNESQIEAISKALATKDFFLIHGPFGTGKTRTILEIIKQEVKRGNKVLVTAESNIAV 233
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NINSVEEIKKRLDQV 1051
DN+L +L +++ VR+G + V K+ + L+ + +E ++K++D++
Sbjct: 234 DNILERL-PENMKCVRVGHPQRVSKKNIERTLAFQVEEHPKYSKIERLQKKIDKL 287
>gi|383123539|ref|ZP_09944218.1| putative DNA helicase [Bacteroides sp. 1_1_6]
gi|251839647|gb|EES67730.1| putative DNA helicase [Bacteroides sp. 1_1_6]
Length = 648
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 218/475 (45%), Gaps = 83/475 (17%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 190 TQKPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 249
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN--------- 1039
+L+ + +N+AVD + KL + + +RIG V+ ++ N
Sbjct: 250 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFENHPSYPELWG 309
Query: 1040 ---SVEEIKKRL----------------------------------DQVKVVAVTCLGIT 1062
S+ E+ R+ D +V+A T +
Sbjct: 310 IRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSN 369
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA G++
Sbjct: 370 HRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDH 429
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
+L ++ ++ P A+S L+ QYRM + IM + Y L + E+ N I
Sbjct: 430 TLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELEA-APEVRNRGI-------- 480
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNEI 1236
L+ P+ +++T + +E ++ N EA L+ + + + K I
Sbjct: 481 -------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYISRIGKARI 533
Query: 1237 --EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRS 1286
E D G+I+PY +Q +R + SS + ++T+D +QG+++D + +S VR+
Sbjct: 534 LDESIDFGLISPYKAQVQYLRSKIRGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRA 593
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
+E+ + L D R+NVA+TRA+ KL+++G TL+K + LI + +++
Sbjct: 594 NEDGQ---IGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLIQYIRQEA 645
>gi|29347483|ref|NP_810986.1| helicase [Bacteroides thetaiotaomicron VPI-5482]
gi|29339383|gb|AAO77180.1| putative helicase [Bacteroides thetaiotaomicron VPI-5482]
Length = 652
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 218/475 (45%), Gaps = 83/475 (17%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 194 TQKPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 253
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN--------- 1039
+L+ + +N+AVD + KL + + +RIG V+ ++ N
Sbjct: 254 PQVLVCAQSNTAVDWICEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFENHSAYPELWG 313
Query: 1040 ---SVEEIKKRL----------------------------------DQVKVVAVTCLGIT 1062
S+ E+ R+ D +V+A T +
Sbjct: 314 IRKSIREMGSRMRRGSYSEREGMRSRMSRLRDRATELEILINADLFDSARVIASTLVSSN 373
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI 1122
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA G++
Sbjct: 374 HRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARGGLDH 433
Query: 1123 SLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
+L ++ ++ P A+S L+ QYRM + IM + Y L + E+ N I
Sbjct: 434 TLMEKVVQQKPSAVSLLKVQYRMHEAIMRFPSEWFYNGELE-AAPEVRNRGI-------- 484
Query: 1183 SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELV----KNEI 1236
L+ P+ +++T + +E ++ N EA L+ + + + K I
Sbjct: 485 -------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYISRIGKARI 537
Query: 1237 --EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRS 1286
E D G+I+PY +Q +R + SS + ++T+D +QG+++D + +S VR+
Sbjct: 538 LDESIDFGLISPYKAQVQYLRSKIRGSSFLRPFRSLITVNTVDGFQGQERDVVFISLVRA 597
Query: 1287 SENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
+E+ + L D R+NVA+TRA+ KL+++G TL+K + LI + +++
Sbjct: 598 NEDGQ---IGFLNDLRRMNVAITRARMKLVILGDATTLTKHAFYRKLIQYIRQEA 649
>gi|329961517|ref|ZP_08299598.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
gi|328531729|gb|EGF58558.1| putative DNA helicase [Bacteroides fluxus YIT 12057]
Length = 627
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 148/566 (26%), Positives = 256/566 (45%), Gaps = 99/566 (17%)
Query: 842 ASGLITEISRFHVSVSFSKPLRL----PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY 897
A G IT ++ F +VS++ R+ PG N+ + + + ++ DE TS+ M
Sbjct: 94 ADGKITYMN-FIATVSYADETRMAVIMPGANAVMEVQAAENLGIQLYFDE--TSYRTMFE 150
Query: 898 NLVQLFLQSAQS-SQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKV 956
L + S+LR +++ P F + + + W LN Q A+ KV
Sbjct: 151 ALEDVSRSKGNRLSELRDIMLGTGKPGF------RELYPVRFPW----LNSTQETAVNKV 200
Query: 957 LTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV 1016
L AKD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD + KL + ++ +
Sbjct: 201 LCAKDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLIDRGVNVL 260
Query: 1017 RIGRHEVVH---------KEIQKHCLSAM------------------NINSVEEIKKRLD 1049
RIG V+ + + H L N + E I+ R+
Sbjct: 261 RIGNPTRVNDKMLSFTYERRFEGHPLYTELWSIRKNLRELSGRSRRGNYDEREGIRNRMS 320
Query: 1050 QVK-------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+++ V+A T + + LL +F +DEA Q
Sbjct: 321 RLRDRATALEIQINADLFDGAHVIASTLVSSNHRLLNGHRFGTLFIDEAAQALEAACWIA 380
Query: 1091 LMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
+ A + VL GDH QLPP ++ EA G+E +L ++ P +S L+ QYRM + IM
Sbjct: 381 IRKADRVVLAGDHCQLPPTIKCHEAARGGLERTLMEKVVSSKPSTVSLLKVQYRMHEDIM 440
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
+ S+ Y N +++ + C + L+ P+ +++T + E
Sbjct: 441 KFSSQWFY------------NGELEAAPEVRC----RGILDWDSPISWIDTSDMDFKEEF 484
Query: 1211 DHQTLN--NPVEACLIAKITQELV----KNEI--EGKDIGIITPYNSQANLIRHSLSV-- 1260
+T N EA L+ + + + N I E D GII+PY +Q +R+ +
Sbjct: 485 VGETFGRINKDEANLLLQELKSYITRIGSNRILEERIDFGIISPYRAQVQYLRNKIKTDA 544
Query: 1261 ------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
S + ++T+D +QG+++D I +S VR++E + L D R+NVA+TRA+ K
Sbjct: 545 SLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLRRMNVAITRARMK 601
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G TLS + L+ + ++
Sbjct: 602 LVILGEAATLSHHSFYRKLMEYISKE 627
>gi|58261218|ref|XP_568019.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57230101|gb|AAW46502.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 952
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 208/468 (44%), Gaps = 86/468 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL---LMRGASILLTSYTNSAV 1001
LN Q RA+ ++ ++ +L+ G PGTGKT +V +K L IL+ ++TN AV
Sbjct: 459 LNRTQLRAM-GMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAV 517
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-------------CLSAMNINSVE------ 1042
DNLL + + +R G E V +++++ C+ M +
Sbjct: 518 DNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKRLKDEIF 577
Query: 1043 --------------EIKKRLDQV---------------KVVAVTCLGITNPLLTDKKFDV 1073
E+KK Q+ VV TC+ + L F +
Sbjct: 578 RLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLNSIDFPI 637
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA T P++L PLM S V ++GDH QLPP++ S +A G+ SLF RL E
Sbjct: 638 VFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFERLIHEK 697
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
L +QYRM + S+ Y L G+ + + L P +
Sbjct: 698 NVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIPDPSTGE 757
Query: 1193 CR------PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELV-KN-EIEGKDIGII 1244
R + F+N L E+ Q++ N EA +I + +L+ KN +++G IGII
Sbjct: 758 LRLWGEKTNLTFLNHSHL---ESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQIGII 814
Query: 1245 TPYNSQANLIRHSL-------------------SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
PY Q ++ +L + VEI T+D ++GR+K+ I+ S VR
Sbjct: 815 APYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIFSTVR 874
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
S+ LGDW R+NV LTRA++ LIMVG+ TL + + K++
Sbjct: 875 SNA---GGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAKMGKIV 919
>gi|421132406|ref|ZP_15592574.1| AAA domain protein [Leptospira kirschneri str. 2008720114]
gi|410356171|gb|EKP03528.1| AAA domain protein [Leptospira kirschneri str. 2008720114]
Length = 631
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 216/458 (47%), Gaps = 86/458 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A++ + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------- 1039
+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 249 VESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKLK 308
Query: 1040 ----------------SVEEIKKRLDQVKVVAVTCLGITNP------------LLTDKKF 1071
V+E+KK + +++ + L ++P +L ++ F
Sbjct: 309 RNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARDILENRTF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 369 DFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNSLETTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L +QYRM + I+ + Y D L G E KE
Sbjct: 426 LESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPE------------------KEK 467
Query: 1190 LNPCRPVI----FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P + +++T + E +++NP EA L ++ L +N+ ++I I++
Sbjct: 468 IPETFPFLNAFQWIDTAGTDSEEVIIDDSISNPFEADLQVRLCFLLKENDWPEEEITILS 527
Query: 1246 PYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PY +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L +
Sbjct: 528 PYRAQVRLISEKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNSEGR---SGFLKESR 584
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
RINV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 585 RINVGMTRARDLLLCIGDSSTLSQDPFLCKLIRFAEEK 622
>gi|423278771|ref|ZP_17257685.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW 610]
gi|404585763|gb|EKA90367.1| hypothetical protein HMPREF1203_01902 [Bacteroides fragilis HMW 610]
Length = 656
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 83/456 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL AKD A++ G PGTGKT+T+V AV L R +L+ + +N+AVD +
Sbjct: 214 LNTTQEEAVNKVLRAKDVAIVHGPPGTGKTTTLVEAVYETLHRENQVLVCAQSNTAVDWI 273
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE---------------------IQKHCLSAMN------ 1037
KL + + +RIG V+ + I+K N
Sbjct: 274 AEKLVDRGVPVLRIGNPSRVNDKMLSFTYERRFESHPAYTELWGIRKSIRDMGNHLRKGG 333
Query: 1038 -------INSVEEIKKRLDQV------------KVVAVTCLGITNPLLTDKKFDVCIMDE 1078
N + +K+R ++ +V+A T + + +LT + F +DE
Sbjct: 334 YSERESTRNRILRLKERATELEILINEDLFSSARVIASTLVSSNHRILTGRHFSTLFIDE 393
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + +L GDH QLPP ++ EA +G++ +L ++ +A+S
Sbjct: 394 AAQALEAACWIAIRKADRVILAGDHCQLPPTIKCMEAARSGLDRTLMEKVVMNKQEAVSL 453
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM+ +A Y L + EI++ I D P+ +
Sbjct: 454 LKIQYRMHRSIMQFPSAWFYQGELE-AAPEISHRGILELDT---------------PINW 497
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNS 1249
++T + +E + +N P EA L+ + + ++ E + D G+I+PY +
Sbjct: 498 IDTSEMDFHEEFVGESFGRINKP-EANLLLQELENYIRKIGENRVAEECIDFGLISPYKA 556
Query: 1250 QANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R+ + + + ++T+D +QG+++D I +S VR++EN + L D
Sbjct: 557 QVQYLRNKIKGNPFFRPYRNRITVNTVDGFQGQERDVIFISLVRANENGQ---IGFLNDL 613
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+SK + LI +
Sbjct: 614 RRMNVAITRARMKLVILGDATTMSKHAFYRKLIEYI 649
>gi|153808854|ref|ZP_01961522.1| hypothetical protein BACCAC_03154 [Bacteroides caccae ATCC 43185]
gi|149128680|gb|EDM19898.1| putative DNA helicase [Bacteroides caccae ATCC 43185]
Length = 647
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 223/476 (46%), Gaps = 87/476 (18%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q+P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 190 TQNPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 249
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV--------- 1023
+L+ + +N+AVD + KL + + +RIG R E
Sbjct: 250 PQVLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWG 309
Query: 1024 VHKEIQKHCLSAMNINSVEE---IKKRL-------------------DQVKVVAVTCLGI 1061
+ K I + S M S E ++ R+ D +V+A T +
Sbjct: 310 IRKSI-RETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTLVSS 368
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA +G++
Sbjct: 369 NHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARSGLD 428
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+L ++ + P A+S L+ QYRM + IM + Y L + E+ I
Sbjct: 429 HTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELE-AAPEVRYRSI------- 480
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEI--- 1236
L+ P+ +++T + +E ++ N EA L+ + + + N I
Sbjct: 481 --------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYI-NRIGKA 531
Query: 1237 ----EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFV 1284
E D G+I+PY +Q +R + VSS + ++T+D +QG+++D I +S V
Sbjct: 532 RILDEKIDFGLISPYKAQVQYLRSKIKVSSFLRPFRSLITVNTVDGFQGQERDVIFISLV 591
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
R++E+ + L D R+NVA+TRA+ KL+++G TL+K P K L++ + ++
Sbjct: 592 RANEDGQ---IGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKE 644
>gi|398339204|ref|ZP_10523907.1| DNA and RNA helicase [Leptospira kirschneri serovar Bim str. 1051]
Length = 631
Score = 163 bits (412), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 217/458 (47%), Gaps = 86/458 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A++ + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------- 1039
+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 249 VESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFK 308
Query: 1040 ----------------SVEEIKKRLDQVKVVAVTCLGITNP------------LLTDKKF 1071
V+E+KK + +++ + L ++P +L ++ F
Sbjct: 309 RNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARDILENRTF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 369 DFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNSLETTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L +QYRM + I+ + Y D L G E KE
Sbjct: 426 LESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPE------------------KEK 467
Query: 1190 LNPCRPVI----FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P + +++T + E + +++NP EA L ++ L +N+ ++I I++
Sbjct: 468 IPETFPFLNAFQWIDTAGTDSEEVIINDSISNPFEADLQVRLCFLLKENDWPEEEITILS 527
Query: 1246 PYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PY +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L +
Sbjct: 528 PYRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESR 584
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
RINV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 585 RINVGMTRARDLLLCIGDSSTLSQDPFLCKLIRFAEEK 622
>gi|218128722|ref|ZP_03457526.1| hypothetical protein BACEGG_00293 [Bacteroides eggerthii DSM 20697]
gi|217989177|gb|EEC55492.1| putative DNA helicase [Bacteroides eggerthii DSM 20697]
Length = 636
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 212/461 (45%), Gaps = 83/461 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D A++ G PGTGKT+T+V A+ L R +L+ + +N AVD +
Sbjct: 194 LNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWI 253
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAM--N 1037
KL + ++ +RIG R E + KE+++ A +
Sbjct: 254 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFENHPLYPELWSIRKELRQLGGRARRGS 313
Query: 1038 INSVEEIKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ E I+ R+ D V+A T + + LL ++F +DE
Sbjct: 314 YDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTLVSSNHRLLNGRRFGTLFIDE 373
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + VL GDH QLPP ++ EA G+E +L +++ P A+S
Sbjct: 374 AAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVAANKPSAVSL 433
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y L + EI + I L+ PV +
Sbjct: 434 LKVQYRMHEDIMRFSSNWFYDGELEA-APEIRHRGI---------------LDWDTPVTW 477
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNS 1249
++T + E +T N EA L+ K + + I G D G+I+PY +
Sbjct: 478 IDTSDMDFKEEFVGETFGRINKEEAHLLLKELEAYILR-IGGSRILEERIDFGLISPYKA 536
Query: 1250 QANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R + S+ + ++T+D +QG+++D I +S VR++E + L D
Sbjct: 537 QVQYLRGKIKGSATLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDL 593
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R+NVA+TRA+ KL+++G TL K L+ V + +G
Sbjct: 594 RRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKKVNG 634
>gi|418676776|ref|ZP_13238054.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|418688291|ref|ZP_13249447.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418739897|ref|ZP_13296278.1| AAA domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|400322676|gb|EJO70532.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa str.
RM52]
gi|410737148|gb|EKQ81890.1| AAA domain protein [Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410753019|gb|EKR09991.1| AAA domain protein [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 631
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 217/458 (47%), Gaps = 86/458 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A++ + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------- 1039
+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 249 VESISARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFK 308
Query: 1040 ----------------SVEEIKKRLDQVKVVAVTCLGITNP------------LLTDKKF 1071
V+E+KK + +++ + L ++P +L ++ F
Sbjct: 309 RNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARDILENRTF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 369 DFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNSLETTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L +QYRM + I+ + Y D L G E KE
Sbjct: 426 LESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPE------------------KEK 467
Query: 1190 LNPCRPVI----FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
+ P + +++T + E + +++NP EA L ++ L +N+ ++I I++
Sbjct: 468 IPETFPFLNAFQWIDTAGTDSEEVIINDSISNPFEADLQVRLCFLLKENDWPEEEITILS 527
Query: 1246 PYNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
PY +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L +
Sbjct: 528 PYRAQVRLISEKLKDVGLTKINVSTIDSFQGRENRCILLGFVRSNPEGR---SGFLKESR 584
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
RINV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 585 RINVGMTRARDLLLCIGDSSTLSQDPFLCKLIRFAEEK 622
>gi|390444674|ref|ZP_10232447.1| ATPase AAA [Nitritalea halalkaliphila LW7]
gi|389664177|gb|EIM75683.1| ATPase AAA [Nitritalea halalkaliphila LW7]
Length = 601
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 232/505 (45%), Gaps = 105/505 (20%)
Query: 908 QSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILG 967
++++L+ +++ + RF P + I ++LN Q +A + A+D AL+ G
Sbjct: 108 RTAELKEVLLGAQPARFS--------PHATLIAPNRALNPPQEKACQLIQQAEDVALVHG 159
Query: 968 MPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFV----------- 1016
PGTGKTST+V A+ +L+ + +N+AVD L +L ++ +
Sbjct: 160 PPGTGKTSTLVQAILTASYTYPQVLVCAPSNAAVDLLTERLGEAGLEVLRLGHPARIDAP 219
Query: 1017 --------RIGRH-------------EVVHKEIQK--------------HCLSAMNINSV 1041
RI H E + K+ K H L + +
Sbjct: 220 IIASTLDARIAAHDSYKELKLLRKKAEALRKQAGKYKRNFGAAERAARNHALQEARM--L 277
Query: 1042 EEIKKRLD---------QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM 1092
+E + L+ + +V+A T +G + L +F + +DEA Q P + P++
Sbjct: 278 KENARHLEDYIHYDVFQRAQVIACTLVGAASAQLDGYRFPLVFIDEAAQGLEPATWIPIL 337
Query: 1093 FASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
A + V+ GDH QLPP ++S EA G+ +LF ++ + P+A L+ QYRM + IM
Sbjct: 338 RADRVVMAGDHCQLPPTIKSFEAGRAGLSRTLFEKVIQRQPEAAVMLEVQYRMPEVIMRF 397
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI-FVNTDMLPAYEAKD 1211
S Y K++ + ++ L+P P++ F++T E K+
Sbjct: 398 SAQTFY------------KGKLQAAPITET-----HRLHPNEPILEFIDTAGTGFLEHKE 440
Query: 1212 HQTLN--NPVEACLIAKITQELVKN------EIEGKDIGIITPYNSQANLIRHSLSVSS- 1262
+L+ N EA + + ++ ++ + EG +IG+I PY++Q +RH + +
Sbjct: 441 KDSLSTLNEREAVALLRYLEQCIRRLGIGHMKQEGWNIGLIAPYSAQVRALRHHIFETFQ 500
Query: 1263 ----------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+ +++ID +QG+++D + +S VR++E L D R+NVALTRAK
Sbjct: 501 FPNLKAFSELLTVNSIDGFQGQERDIMAISLVRANE---TGEIGFLSDIRRMNVALTRAK 557
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKV 1337
+KLI++G TLS P I+ V
Sbjct: 558 RKLIVMGDSATLSHHPFYADFIDYV 582
>gi|134115759|ref|XP_773593.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256219|gb|EAL18946.1| hypothetical protein CNBI2070 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 952
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 208/468 (44%), Gaps = 86/468 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL---LMRGASILLTSYTNSAV 1001
LN Q RA+ ++ ++ +L+ G PGTGKT +V +K L IL+ ++TN AV
Sbjct: 459 LNRTQLRAM-GMMLSEALSLVQGPPGTGKTRVIVETIKLLKHHFQIPHPILVCAHTNVAV 517
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKH-------------CLSAMNINSVE------ 1042
DNLL + + +R G E V +++++ C+ M +
Sbjct: 518 DNLLAGMVKHGVKAIRTGMAERVPTDLKQYTLGIKMESHPMWTCVQTMTEKTKRLKDEIF 577
Query: 1043 --------------EIKKRLDQV---------------KVVAVTCLGITNPLLTDKKFDV 1073
E+KK Q+ VV TC+ + L F +
Sbjct: 578 RLDFGNPERQQKSSELKKIWRQIWGIQQSITRELLLDADVVCTTCISAISANLNSIDFPI 637
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+DEA T P++L PLM S V ++GDH QLPP++ S +A G+ SLF RL E
Sbjct: 638 VFLDEASMATEPLTLLPLMKGSSHVAIIGDHKQLPPVIVSQDAHAGGLSTSLFERLIHEK 697
Query: 1133 PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNP 1192
L +QYRM + S+ Y L G+ + + L P +
Sbjct: 698 NVPSIMLDTQYRMHPSLAAFSSKTFYSSLLKNGTPASERPPPETAFLIPEDPIPDPSTGE 757
Query: 1193 CR------PVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELV-KN-EIEGKDIGII 1244
R + F+N L E+ Q++ N EA +I + +L+ KN +++G IGII
Sbjct: 758 LRLSGEKTNLTFLNHSHL---ESPVLQSMANEGEAEIIVDVVTDLLHKNPDLKGSQIGII 814
Query: 1245 TPYNSQANLIRHSL-------------------SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
PY Q ++ +L + VEI T+D ++GR+K+ I+ S VR
Sbjct: 815 APYLGQIKVLSETLFASETQDSLKRILGDERTEEIQDVEIKTVDGFEGREKEVIIFSTVR 874
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLL 1333
S+ LGDW R+NV LTRA++ LIMVG+ TL + + K++
Sbjct: 875 SNA---GGYIGFLGDWRRVNVGLTRARRALIMVGNKETLKRAKMGKIV 919
>gi|224373108|ref|YP_002607480.1| putative DNA helicase [Nautilia profundicola AmH]
gi|223589915|gb|ACM93651.1| putative DNA helicase [Nautilia profundicola AmH]
Length = 648
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 152/285 (53%), Gaps = 20/285 (7%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
L+ ++V T L +++FD +DEA Q P +L P++ + + GDH QLP
Sbjct: 354 LENAQIVFATNSACGGEFLEEREFDTVFIDEAAQAMEPSTLIPMIKGKQIIFAGDHKQLP 413
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P + S + R +++SLF R SE +P+A+ L QYRM + I E + Y ++ +
Sbjct: 414 PTILSNDER---LKVSLFERFSELYPKAVHTLGIQYRMNEKINEFPSCKFYDCKVKT-YE 469
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT-DMLPAYEAKDHQTLNNPVEACLIAK 1226
EI N IK ++ S + PV+F++T KD + NP EA +
Sbjct: 470 EIKNITIKDLNIQPDSEY-----GDYEPVVFIDTCGKFMEKSKKDSPSKYNPKEAEFVVS 524
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIR-------HSLSVSSVEIHTIDKYQGRDKDCI 1279
+ ++L+KN + + IGIITPY I+ H + S +E+ ++D +QGR+K+ I
Sbjct: 525 LVEKLLKNGAKEEHIGIITPYKDHEEYIKKVISSHLHDFTTSLLEVKSVDGFQGREKEII 584
Query: 1280 LVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
++S VR++E L D R+NVA+TRAK+KL+++G +TL
Sbjct: 585 ILSLVRANEKEE---IGFLSDIRRLNVAITRAKRKLVIIGDAKTL 626
Score = 53.9 bits (128), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LND Q A+ K + + D LI G PGTGKT+T+ +K + G +L+++ +N AVDNL
Sbjct: 174 LNDSQNIALSKSINS-DVFLIHGPPGTGKTTTLAEVIKKHI--GKKLLVSADSNVAVDNL 230
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA 1035
L KLK ++ VRIG + ++ K+ L
Sbjct: 231 LEKLKDFNV--VRIGHPAKMDSKLMKYSLDV 259
>gi|149593466|ref|XP_001517413.1| PREDICTED: DNA2-like helicase-like, partial [Ornithorhynchus
anatinus]
Length = 449
Score = 163 bits (412), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 198/391 (50%), Gaps = 57/391 (14%)
Query: 412 DWFHTVIAPGDTVNVIGEFDDQGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLD 471
DW + PGD +++ GE + ++ +LI++PD+L+SGT +A+S C RR+VL
Sbjct: 62 DWDSLSVEPGDIIHLEGECTSNTWV-INGDSGYLILYPDLLLSGTSIASSIRCMRRAVLS 120
Query: 472 ERLKCSER-SISALLGTLLHQIFQAGLMKEIPTMKFLEEYARLVLQ--KNIESLYACGVN 528
E K S+ S L+GTLLH+IFQ + K L+E+ +Q K+++ +Y ++
Sbjct: 121 ENFKSSDSGSHQMLIGTLLHEIFQRAITDSFAQEK-LQEFVVQTIQEPKHLKEMYRLNMD 179
Query: 529 ENDIHKTLVEAIPKMLNWIILFKD-SQDLNTPTVDF---------GSDGLKKLKISEVTD 578
++ I + + + +P W F + S N P + GSD ++++E D
Sbjct: 180 QDKIKEEIEDYLPSFSKWAENFMNKSFPANLPNIQLSLPSPGNKNGSDC--SIEVTESLD 237
Query: 579 IEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEHRAQVIL 638
IEE W+P++GLKG ID ++ VKI +R +++ I+PLE KTGK N S+EHR+QVIL
Sbjct: 238 IEENIWSPRFGLKGKIDVTVGVKIH-RRCKVDYKIMPLELKTGKESN---SIEHRSQVIL 293
Query: 639 YTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFA----NDIIKASTT 694
YTLL ER ++ ++G L YL++ V+ D L+ RN+ A + + K++
Sbjct: 294 YTLLSQERR-ENPEAGFLLYLRTGNMYPVLANHLDKRELLKLRNQLAFHLFHSVNKSAIG 352
Query: 695 QQ------LPPMLRAYGGNKECSGLGNM-----------------------FDSHIYHLT 725
++ LPP++ K CS L N + + HL
Sbjct: 353 KEPTQLALLPPVISDNQTCKYCSQLHNCALYSRAVEQQVDKNFVPVTMLPKIEKEMQHLK 412
Query: 726 TAHCSFLRHWDRLIDLE--AKEMQVVKNEIW 754
+H + W ++ LE AK+ + + IW
Sbjct: 413 LSHLQYFSLWYLMLTLESQAKDGRKGRRNIW 443
>gi|418700935|ref|ZP_13261873.1| AAA domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410760030|gb|EKR26230.1| AAA domain protein [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 634
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 211/457 (46%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
+E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 AENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|380742039|tpe|CCE70673.1| TPA: DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 629
Score = 162 bits (411), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 108/279 (38%), Positives = 157/279 (56%), Gaps = 19/279 (6%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q+T+P L PL +FVL GDH QLPP + S EA+E + +LF L E
Sbjct: 354 YDVAIIDEATQSTIPSILIPLNKVERFVLAGDHKQLPPTILSLEAQE--LSRTLFEGLIE 411
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL----SSCSPWL 1186
+P L QYRM + IME + YG ++ DE I + DL S W
Sbjct: 412 RYPWKSEMLVVQYRMNERIMEFPSKEFYGGKIIA--DESVRG-ITLRDLVEYQSPNDSWG 468
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
K LNP ++F++T + + ++ NP+EA ++AKI +L+ ++ + IG+
Sbjct: 469 K-ILNPENVIVFIDTSKAENKWERQRRGSESRENPLEAEIVAKIVDKLLSIGVKPEWIGV 527
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI S+ V VE+ T+D YQGR+K+ I++S VRS+ + L D
Sbjct: 528 ITPYDDQRDLI--SMKVPEDVEVKTVDGYQGREKEVIILSLVRSN---KLGEIGFLKDLR 582
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NV+LTRAK+KLI+VG TLS K +I E+
Sbjct: 583 RLNVSLTRAKRKLIVVGDSSTLSSHETYKKMIEFFKEKG 621
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
SQ ++++ +KSLN QR+AI K L ++D+ L+ G GTGKT T+V ++ + RG
Sbjct: 133 SQGEEVNFVPFDKSLNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKRGNK 192
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+L T+ +N AVDNL+ +L I VRIG V K + + L+ +
Sbjct: 193 VLATAESNVAVDNLVERLSRSGIKIVRIGHPSRVSKHLHETTLAYL 238
>gi|423220918|ref|ZP_17207412.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae CL03T12C61]
gi|392622396|gb|EIY16524.1| hypothetical protein HMPREF1061_04185 [Bacteroides caccae CL03T12C61]
Length = 647
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 223/476 (46%), Gaps = 87/476 (18%)
Query: 931 SQDPALSYIWSEKS--LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
+Q+P ++ + LN Q A+ KVL +D A++ G PGTGKT+T+V A+ L R
Sbjct: 190 TQNPGFRELYPVRFPWLNSTQETAVNKVLCTRDVAIVHGPPGTGKTTTLVEAIYETLHRE 249
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV--------- 1023
+L+ + +N+AVD + KL + + +RIG R E
Sbjct: 250 PQVLVCAQSNTAVDWISEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWG 309
Query: 1024 VHKEIQKHCLSAMNINSVEE---IKKRL-------------------DQVKVVAVTCLGI 1061
+ K I + S M S E ++ R+ D +V+A T +
Sbjct: 310 IRKSI-RETGSRMRKGSYSEREGMRSRMSRLRDRATELEIQINTDLFDSARVIASTLVSS 368
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGME 1121
+ LL ++F +DEA Q + A + +L GDH QLPP ++ EA +G++
Sbjct: 369 NHRLLNGRRFPTLFIDEAAQALEAACWIAIRKADRVILAGDHCQLPPTIKCIEAARSGLD 428
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+L ++ + P A+S L+ QYRM + IM + Y L + E+ I
Sbjct: 429 HTLMEKVVHKKPSAVSLLKMQYRMHESIMRFPSEWFYHGELE-AAPEVRYRSI------- 480
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEI--- 1236
L+ P+ +++T + +E ++ N EA L+ + + + N I
Sbjct: 481 --------LDFDTPMNWIDTSEMDFHEEFVGESFGRINKQEANLLLQELEAYI-NRIGKA 531
Query: 1237 ----EGKDIGIITPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFV 1284
E D G+I+PY +Q +R + VSS + ++T+D +QG+++D I +S V
Sbjct: 532 RILDEKIDFGLISPYKAQVQYLRSKIKVSSFLRPFRSLITVNTVDGFQGQERDVIFISLV 591
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
R++E+ + L D R+NVA+TRA+ KL+++G TL+K P K L++ + ++
Sbjct: 592 RANEDGQ---IGFLNDLRRMNVAITRARMKLVILGDAVTLTKHPFYKRLMSFIKKE 644
>gi|14521437|ref|NP_126913.1| DNA helicase, [Pyrococcus abyssi GE5]
gi|5458655|emb|CAB50143.1| DNA helicase, putative [Pyrococcus abyssi GE5]
Length = 653
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 152/263 (57%), Gaps = 19/263 (7%)
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+DV I+DEA Q+T+P L PL +FVL GDH QLPP + S EA+E + +LF L E
Sbjct: 378 YDVAIIDEATQSTIPSILIPLNKVERFVLAGDHKQLPPTILSLEAQE--LSRTLFEGLIE 435
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL----SSCSPWL 1186
+P L QYRM + IME + YG ++ DE I + DL S W
Sbjct: 436 RYPWKSEMLVVQYRMNERIMEFPSKEFYGGKIIA--DESVRG-ITLRDLVEYQSPNDSWG 492
Query: 1187 KEALNPCRPVIFVNTDMLP---AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGI 1243
K LNP ++F++T + + ++ NP+EA ++AKI +L+ ++ + IG+
Sbjct: 493 K-ILNPENVIVFIDTSKAENKWERQRRGSESRENPLEAEIVAKIVDKLLSIGVKPEWIGV 551
Query: 1244 ITPYNSQANLIRHSLSV-SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
ITPY+ Q +LI S+ V VE+ T+D YQGR+K+ I++S VRS+ + L D
Sbjct: 552 ITPYDDQRDLI--SMKVPEDVEVKTVDGYQGREKEVIILSLVRSN---KLGEIGFLKDLR 606
Query: 1303 RINVALTRAKKKLIMVGSCRTLS 1325
R+NV+LTRAK+KLI+VG TLS
Sbjct: 607 RLNVSLTRAKRKLIVVGDSSTLS 629
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 64/106 (60%)
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
SQ ++++ +KSLN QR+AI K L ++D+ L+ G GTGKT T+V ++ + RG
Sbjct: 157 SQGEEVNFVPFDKSLNRSQRKAISKALGSEDFFLVHGPFGTGKTRTLVELIRQEVKRGNK 216
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM 1036
+L T+ +N AVDNL+ +L I VRIG V K + + L+ +
Sbjct: 217 VLATAESNVAVDNLVERLSRSGIKIVRIGHPSRVSKHLHETTLAYL 262
>gi|50546118|ref|XP_500586.1| YALI0B06897p [Yarrowia lipolytica]
gi|49646452|emb|CAG82817.1| YALI0B06897p [Yarrowia lipolytica CLIB122]
Length = 649
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 240/500 (48%), Gaps = 83/500 (16%)
Query: 891 SFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQ 949
++ M + L + ++ + S L R+ VD E + S DP L + +LN Q
Sbjct: 138 TYRRMEFALKDMLRMKEQEMSDLMRVCVDKE-----TISDHKDDPNLQLYNT--ALNPSQ 190
Query: 950 RRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDNLLIKL 1008
A+ + + ++ G PGTGKT T+V ++ L+ + G +L+ +N +VD LL +L
Sbjct: 191 VEAVQHSVGSAQVTVVHGPPGTGKTHTLVEIIRQLVQKKGQRVLVCGPSNISVDTLLERL 250
Query: 1009 KSQ--SIDFVRIGR-HEVVHKEIQ-------KHCLSAMNINSVE---------------- 1042
+RIG ++ +Q K C S + V+
Sbjct: 251 HPHFNGNQLLRIGHPARLLEANLQHSLDIVSKTCDSGQIVKDVQVNIDQQLRKISKTKSG 310
Query: 1043 ---------------EIKKR--------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
E K+R L Q KVV T G + L D +FD I+DE
Sbjct: 311 REKYAMYKEIGMLRKEFKERQKKVVADLLLQAKVVCATLHGTGDSCLKDVQFDTIIIDEI 370
Query: 1080 GQTT-----LPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR-ENGMEISLFRRLSEEHP 1133
Q+ +P+S P A K ++ GD+ QLPP V+ +++ + +E++LF L +
Sbjct: 371 SQSLEPQCWIPISRYP--SAQKLIIAGDNQQLPPTVKCEQSKIKKQLELTLFDHLVGNYD 428
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
L+ QYRM IM+ + +YG +L S + A+ ++DL P + E
Sbjct: 429 NIRRLLKVQYRMHDAIMQFPSQELYGGQLVAHS---SVARHTLADL----PHVTEDYETT 481
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPV-----EACLIAKITQELVKNEIEGKDIGIITPYN 1248
PV++++T YE +D NP EA L+ + +L+ + +IG+ITPY+
Sbjct: 482 TPVVWIDTQGDDFYEQEDESGKLNPSRLNDSEAYLVRRHVGKLLDLGVLESEIGVITPYS 541
Query: 1249 SQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
+QA+LIR + + +VE+ T+D +QGR+K+ +++S VRS+EN LG++ R+NV
Sbjct: 542 AQASLIRSLIHPTNPAVEVATVDSFQGREKEAVILSLVRSNENHE---IGFLGEYRRLNV 598
Query: 1307 ALTRAKKKLIMVGSCRTLSK 1326
A+TR ++ L +VG+ TL++
Sbjct: 599 AMTRPRRHLCVVGNMETLAR 618
>gi|401828687|ref|XP_003888057.1| DNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999131|gb|AFM99076.1| DNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 931
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 187/393 (47%), Gaps = 85/393 (21%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQR A+ L K+Y +I GMPGTGK++ + +K L+ +LL YTN A+ N+
Sbjct: 620 LNDDQRSALFLSLNCKNYRIIHGMPGTGKSTLICLLIKILVHLKKKVLLICYTNLALANI 679
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
KL I G+ K + E K + +++V TC ++P
Sbjct: 680 TKKL--SGIRIYTAGKEGFFFK-------------ATTEAKVFFENIELVVGTCFSFSDP 724
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ +++FD C++DE Q L ++L P+ ++KFV+VGDH QL PL +S++ + +SL
Sbjct: 725 IYVNRQFDFCVVDEGSQMHLLLALIPVSISTKFVIVGDHLQLKPLSRSSKE----LSLSL 780
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L E S L+ QYRM IM LSN L Y L
Sbjct: 781 FEYLLGED---YSKLRIQYRMGNEIMRLSNTLFYNGEL---------------------- 815
Query: 1185 WLKEALNPCRP--VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
+ RP V F++TD++ D +L E C
Sbjct: 816 -----VGKKRPSSVEFIDTDIV------DFISLVPSFEKC-------------------T 845
Query: 1243 IITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
I+ +N+Q +LIR + + T+D++QG + D ++V F S+ ++
Sbjct: 846 ILCYFNAQVDLIREK---TRCAVETVDRFQGSEDDKVVVVFDPVSK------CEVMESSE 896
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R+NVALTRAKK L++VGS +S++ +LK LI+
Sbjct: 897 RLNVALTRAKKHLVLVGSKSKMSEIDILKKLIS 929
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 45/256 (17%)
Query: 433 QGKCDVGRENNFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---KCSERSISALLGTLL 489
+ K V N+L+V D V+ T ++ S C R ++ ++ + S +G ++
Sbjct: 162 RSKIFVTDTRNYLVVE-DNPVAITTLSESLVCRNRRYVNAKIASIRLSHTDARVFIGVIV 220
Query: 490 HQIFQAGLMKEIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIIL 549
H I + LM + FL A+ + +N+ +Y CG++E KT + K++ I +
Sbjct: 221 HFIMERALMHKNFAHDFLISQAKKGISENVMLMYKCGIDE----KTALNETLKLIRNIHM 276
Query: 550 FKDSQDLNTPTVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEI 609
FKD + E + E+ + + +KG DA
Sbjct: 277 FKDYR-------------------FETVETEKRLMSLLFNIKGDADAI------------ 305
Query: 610 NGMILPLEFKTGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMV 669
G+ LE K+ K EHRAQVILY L++ E+ S LYY+ + + V +
Sbjct: 306 -GIDKVLEIKSAK----SQRPEHRAQVILYALMLKEKTGSDF-SPYLYYIPAGELIEVKL 359
Query: 670 QRSDLVGLIMRRNEFA 685
+ ++ L+ RN+ A
Sbjct: 360 RHQEIRSLLNLRNKIA 375
>gi|344295466|ref|XP_003419433.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Loxodonta africana]
Length = 931
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/393 (31%), Positives = 203/393 (51%), Gaps = 32/393 (8%)
Query: 964 LILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIG--RH 1021
L LG P S H++ A+L R S + + +D + +K K ++ D G R+
Sbjct: 190 LRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKEIDQVFVKNK-KTQDKREKGNFRN 248
Query: 1022 EV--VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN----PLLTDKKFDVCI 1075
E+ + KE+++ +AM + L VV T G ++ LL + FDV +
Sbjct: 249 ELKQLRKELKEREEAAM--------LQSLTSAHVVLATNTGASSDGPLKLLPESYFDVVV 300
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQ- 1134
+DE Q PL+ A K +L GDH QLPP V S +A G+ +SL RL+E+H +
Sbjct: 301 IDECAQALEASCWIPLLKARKCILAGDHKQLPPTVISHKAGLAGLSLSLMERLAEQHGER 360
Query: 1135 AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR 1194
A+ L QYRM I + ++ +YG +L+ + A+ + DL +P + A+
Sbjct: 361 AVRLLTVQYRMHDAISQWASEALYGGQLTA---HPSVAQHLLRDLPGVAPTEETAV---- 413
Query: 1195 PVIFVNTDMLPAYE--AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQAN 1252
P++ ++T +E ++ Q+ NP E L++ Q LV + +DI +ITPYN Q +
Sbjct: 414 PLLLIDTAGCGLFELDEEEEQSRGNPGEVRLVSLHVQALVDAGVPARDIAVITPYNLQVD 473
Query: 1253 LIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTR 1310
L+R SL+ +E+ ++D +QGR+K+ +++SFVRS+ R L + RINVA+TR
Sbjct: 474 LLRQSLAHRYPELEMKSVDGFQGREKEAVILSFVRSN---RKGEVGFLAEDRRINVAVTR 530
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
A++ + +V RT++ LK L+ E +
Sbjct: 531 ARRHVAIVCDSRTVTNHAFLKTLVGYFTEHGEV 563
>gi|418726118|ref|ZP_13284729.1| AAA domain protein [Leptospira interrogans str. UI 12621]
gi|418733454|ref|ZP_13290578.1| AAA domain protein [Leptospira interrogans str. UI 12758]
gi|409960028|gb|EKO23782.1| AAA domain protein [Leptospira interrogans str. UI 12621]
gi|410773063|gb|EKR53094.1| AAA domain protein [Leptospira interrogans str. UI 12758]
Length = 634
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E I L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|424841557|ref|ZP_18266182.1| UvrD/REP helicase [Saprospira grandis DSM 2844]
gi|395319755|gb|EJF52676.1| UvrD/REP helicase [Saprospira grandis DSM 2844]
Length = 1127
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 236/985 (23%), Positives = 410/985 (41%), Gaps = 167/985 (16%)
Query: 445 LIVHPDVLVSGTRVAASFSCPRRS---VLDERLKCSERSISALLGTLLHQIFQAGLMKEI 501
+I+ PD LV T +A F S L ++ E S+ +LG + ++ L+ +
Sbjct: 223 IILEPDYLVDVTSIAECFQPQGASPYLFLLKKFSVYENSLPLMLGNIANRFL--DLLSKN 280
Query: 502 PTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNW--IILFKDSQDLNTP 559
P + F EE+ +L ++ L + DI KT EA +N IIL
Sbjct: 281 PKLGFQEEFKKLF---SLNPLGFADFKDTDIRKTYHEAKNHFINLQHIIL---------- 327
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
+F G+++ +I +E ++ YG++G +D + E + L +E K
Sbjct: 328 -NEFPKQGIERERIL----LEPSFYSALYGIQGRLD------LWQPPAEGDDKALIVELK 376
Query: 620 TGK--IPNGQS-SMEHRAQVILYTLLMSERY-----LKHIDSGLLYYLQSDQTQGVMVQR 671
+GK +PN + + H Q +LY LL Y L HI L +
Sbjct: 377 SGKTFMPNKYNLNHNHYVQTLLYGLLTKSVYPSYKSLAHILYSKLQEKPLRLAPSTQFKE 436
Query: 672 SDLVGL----IMRRNEFA----NDIIKASTTQQLPPMLRAYGGNKECSGLGNMFDSHIYH 723
+ + L +M + A + + + QL P + GL F++ +
Sbjct: 437 DEALALRNQMVMMERQLAQLDQSSLEEYGLLHQLGPAILPKASGYTARGLEE-FEACFSN 495
Query: 724 LT-------TAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDAS 776
L+ A CSF + K +I G GN + + L
Sbjct: 496 LSELERRYFIAFCSF----------------IAKEQILAKTGVEGNDRANGQAGLWLS-- 537
Query: 777 NEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMD--CTLRSGDYVILST 834
+++ +D HF N S+ + I T++ + R GD IL
Sbjct: 538 ---ERADKDE----HFELLAGLELLENNSEQEPPILRFKRTENTNPLANFRQGDIAILYP 590
Query: 835 ESD------RLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEI 888
E + + G I++I+ + P + S S ++ + W ++ D +
Sbjct: 591 EMGQDDNVLKHQIFKGSISQINAEELCFKLYSP-----QCSGSVFEA--AKSWSLEHDML 643
Query: 889 MTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLND 947
F+V +L + A+ R++++ AP+ S Q+ + + + L +
Sbjct: 644 DKGFTVQYQSLFKFMNFHPAK----RQLLLGQRAPQKSSAP---QNRS----FMQPYLGE 692
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA--SILLTSYTNSAVDNLL 1005
DQ+R + K L A+DY L++G PGTGKT M+ + L R + +ILL +YTN AVD +
Sbjct: 693 DQKRILNKALDAQDYFLLVGPPGTGKTKFMLAQMVEYLHRNSQENILLLAYTNRAVDEIC 752
Query: 1006 IKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAVTCLGIT 1062
++ ID ++R+G + S + S ++++ +++ +V T +
Sbjct: 753 EAIEEVGIDDYLRMGSRYSCDPRFEHRMFSVQTEALASRKDLRATIEKHRVFVSTVSSML 812
Query: 1063 N-PLLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLV-QSTEARENG 1119
N PLL K+F+ I+DEA Q P+ LG L +FVL+GDH QLP +V Q E
Sbjct: 813 NRPLLLKLKQFNTVIIDEASQILEPMLLGLLPHFQRFVLIGDHKQLPAVVLQDKEQSAVK 872
Query: 1120 MEI-----------SLFRRLSEEHPQ-----AISALQSQYRMCQGIMELSNALIYGDRLS 1163
E+ SLF RL E+ + LQ Q RM I + Y ++L
Sbjct: 873 DELLQSIGLRNRRNSLFERLFEQAQKEGWTHCYDQLQHQGRMHAEIARFPSQFFYDNKL- 931
Query: 1164 CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV--------IFVNTDMLPAYEAKDHQ-- 1213
+++ + W ++ L P RP+ + +L D+Q
Sbjct: 932 ----------LELPKDNPIGDWQQQPL-PFRPMPQASALEQLLAQHRLLFIPSQSDYQGN 980
Query: 1214 TLNNPVEACLIAKIT---QELVKNEIEG---KDIGIITPYNSQANLIRHSLS-----VSS 1262
+ N EA + ++ + L + + G +D+GIITP+ +Q IRH L+
Sbjct: 981 SKTNEEEAIRVGELVHAFRNLYEQQGGGFAPEDLGIITPFRAQIAQIRHVLAQYNMGYEQ 1040
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH---RINVALTRAKKKLIMVG 1319
I T+++YQG + IL+S + + SL D ++NVALTRA+++L+++G
Sbjct: 1041 CSIDTVERYQGGARKIILLSLAINMSHQLPAIVSLSDDEQVDRKLNVALTRARQQLVVLG 1100
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + L+ P L+ + E+ G
Sbjct: 1101 NPKLLANDPRYAALMAWIKERGGYF 1125
>gi|455789602|gb|EMF41523.1| AAA domain protein [Leptospira interrogans serovar Lora str. TE 1992]
Length = 634
Score = 162 bits (410), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E I L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|224026767|ref|ZP_03645133.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
gi|224020003|gb|EEF78001.1| hypothetical protein BACCOPRO_03524 [Bacteroides coprophilus DSM
18228]
Length = 607
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 215/463 (46%), Gaps = 70/463 (15%)
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
S FS P + + W LN Q A+ KVL AKD A++ G PGTGKT+T+V AV L R
Sbjct: 157 SSFSFQP-VRFPW----LNRTQEEAVNKVLHAKDVAIVHGPPGTGKTTTLVEAVYETLHR 211
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIG----------------RHEV-------- 1023
+L+ + +N AVD + KL + + +RIG R E
Sbjct: 212 ENQVLVCAQSNMAVDWISEKLVDRGVSVLRIGNPSRVNDKMLSFTYERRFESHPDYPQLW 271
Query: 1024 -VHKEIQKHCLSAMNINSVEEIKKRLDQVK-------------------VVAVTCLGITN 1063
+ K +++ + E I+++++ +K V+A T + N
Sbjct: 272 SIRKAVRELYARMRKASDRESIRQKINSLKDRATELEIRINASLFAEARVIACTLVSSAN 331
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
LL +KF +DEA Q P+ + +L GDH QLPP V+ +A G+ +
Sbjct: 332 RLLEGQKFGTLFIDEAAQALEAACWIPIRKVDRVILAGDHCQLPPTVKCPQALRAGLGET 391
Query: 1124 LFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
L + + + P+ ++ L+ QYRM + IM S+ YG + + + + D +
Sbjct: 392 LMQTIVKNKPETVALLKLQYRMNEEIMRFSSDWFYGGMVQSAPEVKYRS---ILDFDTPI 448
Query: 1184 PWL-KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
W+ E ++ + N + EA+ L+ I KI +E E D+G
Sbjct: 449 EWIDTEDMDCNEEFVGENYGRINKAEAE----LSVSQLKTYITKIGRERFLE--ERIDVG 502
Query: 1243 IITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
+I+PY +Q +R L S + ++T+D +QG+++D IL+S VR++E+ +
Sbjct: 503 LISPYKAQVQYLRQLLKRDPFFKPYRSLITVNTVDGFQGQERDVILISLVRANEDGQ--- 559
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
L D R+NVA+TRA+ KLI++G TL++ + L +
Sbjct: 560 IGFLSDLRRMNVAITRARMKLIILGDVSTLTRHAFYRKLYEYI 602
>gi|421123849|ref|ZP_15584119.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421134672|ref|ZP_15594805.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410021256|gb|EKO88048.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410438336|gb|EKP87422.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
2006006986]
Length = 634
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|418692553|ref|ZP_13253631.1| AAA domain protein [Leptospira interrogans str. FPW2026]
gi|400357786|gb|EJP13906.1| AAA domain protein [Leptospira interrogans str. FPW2026]
Length = 634
Score = 162 bits (409), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|418696259|ref|ZP_13257268.1| AAA domain protein [Leptospira kirschneri str. H1]
gi|421107423|ref|ZP_15567975.1| AAA domain protein [Leptospira kirschneri str. H2]
gi|409955788|gb|EKO14720.1| AAA domain protein [Leptospira kirschneri str. H1]
gi|410007439|gb|EKO61149.1| AAA domain protein [Leptospira kirschneri str. H2]
Length = 631
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 212/454 (46%), Gaps = 78/454 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A++ + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQKNAVVHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIGR--------------HEVVH----KEIQKHCLSAMNIN------- 1039
+ + ++ I +R+G +++ H K + ++ + I+
Sbjct: 249 VESILARGISVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVIEISKQAKKFK 308
Query: 1040 ----------------SVEEIKKRLDQVKVVAVTCLGITNP------------LLTDKKF 1071
V+E+KK + +++ + L ++P +L ++ F
Sbjct: 309 RNFGEKEREERKNLFMEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENRTF 368
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE- 1130
D C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF + +E
Sbjct: 369 DFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNSLETTLFEKAAER 425
Query: 1131 -EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
E + L +QYRM + I+ + Y D L G E + S+ W+ +
Sbjct: 426 LESHGRVFLLDTQYRMKEEIVSFPSKEFYSDILKSGRPEKERIP-ETFPFSNAFQWIDTS 484
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
VI +++NP EA L ++ L +N+ +I I++PY +
Sbjct: 485 GTDSEEVIL-------------DDSISNPFEADLQVRLCFLLKENDWPEDEITILSPYRA 531
Query: 1250 QANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RINV
Sbjct: 532 QVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRRINV 588
Query: 1307 ALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 GMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 622
>gi|358057175|dbj|GAA97082.1| hypothetical protein E5Q_03757 [Mixia osmundae IAM 14324]
Length = 733
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/459 (28%), Positives = 211/459 (45%), Gaps = 87/459 (18%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAV 1001
+ +LN Q+ A+ L A++ ALI G PGTGKTST++ ++ L+ G +L+ +N AV
Sbjct: 262 DDALNQSQQDAVKFALHAREVALIHGPPGTGKTSTLIEIIRQLVRLGQRVLVCGASNLAV 321
Query: 1002 DNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSV---------EEIKK------ 1046
DN++ +L+ S+ R+G + + Q+ L +S ++I K
Sbjct: 322 DNIVERLQVHSVPLTRLGHPARILEATQRSTLDYQTAHSANGALAQDVRDDIAKIFADLA 381
Query: 1047 -----------RLDQVK----------------------VVAVTCLGITNPLLTDKKFDV 1073
+LD++K VV TC G + + FDV
Sbjct: 382 KGKLQGKGRRAKLDEIKLLRKELRVREAGVTSSVIGQARVVLCTCHGAGSKQIMRDTFDV 441
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE------------------- 1114
I+DEA Q P++ A K VL GD QLPP +++++
Sbjct: 442 AIIDEAAQALEGSCWIPILKAQKLVLAGDPLQLPPTIKTSDKDFKQAKVSLASISKSSKL 501
Query: 1115 ARENGMEISLFRRLSEEHPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAK 1173
+E +LF RL + I L S QYRM + IM ++ +Y +L A
Sbjct: 502 CSARNLETTLFDRLLAMYGAKIKCLLSIQYRMNERIMRFASDALYEGKLV--------AA 553
Query: 1174 IKVSDLSSCSPWLKEALNPC-RPVIFVNTDMLPAYEAKDHQT------LNNPVEACLIAK 1226
++V D C + + PVIF++T YE D +T N EA + K
Sbjct: 554 LQVKDRLLCDLVETKGDDVLDHPVIFIDTTGNDMYERADEETGVRTLSKYNENEAVQVVK 613
Query: 1227 ITQELVKNEIEGKDIGIITPYNSQANLIRHSL-SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
E+V + K I +I+PYN+Q +L+R L + + + +ID +QGR+ +CI++S VR
Sbjct: 614 HISEIVSAGLPPKCIAVISPYNAQVSLLRSLLVHLPDISVGSIDSWQGREAECIIISLVR 673
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
S++ L + R+NVA+TRAK++L +VG T+
Sbjct: 674 SNDQRE---VGFLKESRRLNVAMTRAKRQLCVVGDAGTV 709
>gi|317475492|ref|ZP_07934755.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
gi|316908323|gb|EFV30014.1| hypothetical protein HMPREF1016_01737 [Bacteroides eggerthii
1_2_48FAA]
Length = 633
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 211/461 (45%), Gaps = 83/461 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D A++ G PGTGKT+T+V A+ L R +L+ + +N AVD +
Sbjct: 191 LNSTQETAVNKVLCARDVAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWI 250
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAM--N 1037
KL + ++ +RIG R E + KE+++ A +
Sbjct: 251 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFENHPLYPELWSIRKELRQLGGRARRGS 310
Query: 1038 INSVEEIKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ E I+ R+ D V+A T + + LL + F +DE
Sbjct: 311 YDEREGIRSRMSRLRDRATALEVQINTELFDSAHVIASTLVSSNHRLLNGRHFGTLFIDE 370
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + VL GDH QLPP ++ EA G+E +L +++ P A+S
Sbjct: 371 AAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVAASKPSAVSL 430
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y L + EI + I L+ PV +
Sbjct: 431 LKVQYRMHEDIMRFSSNWFYDGELEA-APEIRHRGI---------------LDWDTPVTW 474
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNS 1249
++T + E +T N EA L+ K + + I G D G+I+PY +
Sbjct: 475 IDTSDMDFKEEFVGETFGRINKEEAHLLLKELEAYILR-IGGSRILEERIDFGLISPYKA 533
Query: 1250 QANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
Q +R + S+ + ++T+D +QG+++D I +S VR++E + L D
Sbjct: 534 QVQYLRGKIKGSATLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDL 590
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSG 1342
R+NVA+TRA+ KL+++G TL K L+ V + +G
Sbjct: 591 RRMNVAITRARMKLVILGEAATLGHHAFYKQLLEYVKKVNG 631
>gi|417782925|ref|ZP_12430648.1| AAA domain protein [Leptospira interrogans str. C10069]
gi|421120479|ref|ZP_15580790.1| AAA domain protein [Leptospira interrogans str. Brem 329]
gi|409953626|gb|EKO08122.1| AAA domain protein [Leptospira interrogans str. C10069]
gi|410346593|gb|EKO97563.1| AAA domain protein [Leptospira interrogans str. Brem 329]
gi|456821420|gb|EMF69926.1| AAA domain protein [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 634
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|241851957|ref|XP_002415809.1| DNA replication helicase DNA2, putative [Ixodes scapularis]
gi|215510023|gb|EEC19476.1| DNA replication helicase DNA2, putative [Ixodes scapularis]
Length = 574
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 143/531 (26%), Positives = 240/531 (45%), Gaps = 94/531 (17%)
Query: 573 ISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSMEH 632
++ V DIEE W P+ GLKG +DAS+ V + K + PLE KTG+ S +H
Sbjct: 12 VTRVADIEENHWCPRLGLKGKVDASVEVALHKKPARV-----PLELKTGR---HTFSHDH 63
Query: 633 RAQ---------------------------VILYTLLMSERYLKHIDSGLLYYLQSD-QT 664
+AQ V+LY+L+M+ER GLL YL+
Sbjct: 64 KAQFFSSSSVVLSVSSPQWDVRCIVAPSPQVVLYSLMMAERQDWDPQEGLLLYLRDGVDM 123
Query: 665 QGVMVQRSDLVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKEC--SGLGNMFDSH-- 720
+ V D L+ RRNE A + + LPP + + +C + + + F
Sbjct: 124 RWVASPHRDRGALVQRRNELAQCLQPGA---HLPPPIDSERHCPKCPHAVVCSAFRGEPV 180
Query: 721 ------------IYHLTTAHCSFLRHWDRLIDLEAKEM--QVVKNEIW----CSRGSGGN 762
+ HL+ +H ++L W R++D E + ++ W CSR S G
Sbjct: 181 QGEERPAFVAQSVSHLSPSHRAYLLSWCRMLDEEGYHAGERDLQEHFWLDDACSRESRGL 240
Query: 763 HFTGCLSSIVLDASNEHQKSYRDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDC 822
CLS + L E V H + + +P A +P
Sbjct: 241 ----CLSDLSL-VHCEAPPGDDARPPVRHVLERKRGTPGAPAR--------PLPP----V 283
Query: 823 TLRSGDYVILSTESDR--LAVASGLITEISRFHVSVSFSKPLRL-PGRNSSSDADSLLHE 879
L +GD V+LS + +A+A+G + ++ HV + + R PG +
Sbjct: 284 GLAAGDRVVLSEQGSLTCVALATGTLAALTESHVELLLDRDTRRSPGWEGKT-------- 335
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+R+D+ + S ++ L +L ++++LR ++VD AP F + ++ A
Sbjct: 336 -FRVDRSPSVASAAISYTFLGRLVGVDPRAARLRALLVDRAAPSFRT--TLPREVATLCR 392
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ + LND QRR +++ L DY L+ GMPGTGKT+T+ V AL++ +L+TSYT+S
Sbjct: 393 PALRGLNDTQRRVVLRFLMCDDYLLLRGMPGTGKTTTLAALVHALVLLKKRVLVTSYTHS 452
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQ 1050
VD++L+KL+S+ + F+R+G +H ++ SA + + + L++
Sbjct: 453 GVDSILLKLRSRGVPFLRLGPTNRMHPLVRDQ--SAETLTAALRTTRELEE 501
>gi|24214798|ref|NP_712279.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. 56601]
gi|386074163|ref|YP_005988480.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. IPAV]
gi|24195805|gb|AAN49297.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. 56601]
gi|353457952|gb|AER02497.1| DNA and RNA helicase [Leptospira interrogans serovar Lai str. IPAV]
Length = 634
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|417761126|ref|ZP_12409140.1| AAA domain protein [Leptospira interrogans str. 2002000624]
gi|417775436|ref|ZP_12423289.1| AAA domain protein [Leptospira interrogans str. 2002000621]
gi|418672662|ref|ZP_13233998.1| AAA domain protein [Leptospira interrogans str. 2002000623]
gi|409943120|gb|EKN88723.1| AAA domain protein [Leptospira interrogans str. 2002000624]
gi|410574761|gb|EKQ37790.1| AAA domain protein [Leptospira interrogans str. 2002000621]
gi|410580350|gb|EKQ48175.1| AAA domain protein [Leptospira interrogans str. 2002000623]
Length = 634
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 210/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|452987618|gb|EME87373.1| hypothetical protein MYCFIDRAFT_26275 [Pseudocercospora fijiensis
CIRAD86]
Length = 694
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 147/547 (26%), Positives = 240/547 (43%), Gaps = 109/547 (19%)
Query: 872 DADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQ---LRRMIVDLEAPRFDSGS 928
DAD ++W + ++ + R N LQ Q S+ L +++ +P +
Sbjct: 133 DADLPTGKLWLV---KLANDVTYKRLNQTMSRLQKMQPSEHSTLTQVLFGRSSPT----A 185
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG 988
V D WS+ +LND Q+ AI L +++ LI G PGTGKT T++ + LL +
Sbjct: 186 VSDSDLKAEIQWSDPTLNDSQKEAIQFALASQEVVLIHGPPGTGKTHTLIELILQLLKQK 245
Query: 989 ASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEE 1043
+L+ +N +VDN++ +L + VR+G + + H + + S V +
Sbjct: 246 LRLLVCGPSNISVDNIIERLAPHKVSMVRLGHPARLLPSVINHSMEVLTNTSDAAAIVTD 305
Query: 1044 IKKRLD------------------------------------------QVKVVAVTCLGI 1061
I+ +D Q +VV T G
Sbjct: 306 IRSEMDSKQASIRKTRNGRERKAIYGELKDLRKEYREREGRVVRELLQQSQVVLSTLHGS 365
Query: 1062 TNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF--ASKFVLVGDHYQLPPLVQSTEARENG 1119
L D++FDV I+DEA Q P++ ASK VL GDH QLPP ++S+ +++
Sbjct: 366 GGFQLKDQEFDVVIVDEASQALEAQCWIPVLTSGASKLVLAGDHLQLPPTIKSSNSKDTT 425
Query: 1120 --------------------------MEISLFRRLSEEHPQAIS-ALQSQYRMCQGIMEL 1152
+E +LF RL + H I L +QYRM + IM+
Sbjct: 426 KALAKASLTDQKSTGGAAKAKDDDVHLETTLFDRLLKLHGNKIKRMLTTQYRMHEKIMQF 485
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEA 1209
+ +YGD+L IA +K L + N P+IF +T D EA
Sbjct: 486 PSHALYGDKL------IAADAVKSRLLKDLPYGVAGNDNTIEPLIFFDTQGGDFPEKTEA 539
Query: 1210 KD---------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL-- 1258
+D ++ N EA ++ + LV + ++ DI ++TPYN Q L+ L
Sbjct: 540 EDTVKGKSSLLAESKVNEAEALIVREHIINLVNSGVKADDIAVVTPYNGQLALLSQMLKE 599
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
V +E+ ++D +QGR+K+ ++VS VRS+ L + R+NVA+TR K++L ++
Sbjct: 600 QVPGLELGSVDGFQGREKEAVIVSLVRSNAEHE---VGFLSEKRRLNVAMTRPKRQLCVI 656
Query: 1319 GSCRTLS 1325
G T+S
Sbjct: 657 GDSETIS 663
>gi|222445377|ref|ZP_03607892.1| hypothetical protein METSMIALI_01005 [Methanobrevibacter smithii DSM
2375]
gi|222434942|gb|EEE42107.1| putative DNA helicase [Methanobrevibacter smithii DSM 2375]
Length = 658
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 154/269 (57%), Gaps = 28/269 (10%)
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF+V I+DEA Q T+P L PL A +F+L GDH QLPP + S +A + +E +LF L
Sbjct: 379 KFNVVIVDEASQATIPSILIPLSKARRFILAGDHKQLPPTIISKKA--HFLEKTLFEELI 436
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS-------DEIAN----AKIKVSD 1178
+++P S L QYRM +M+ N+ Y L S DEI + +++K SD
Sbjct: 437 KKYPNKSSLLNVQYRMNSFLMKFPNSEFYNGNLKSDSSVDDINLDEIIDLEELSRLKESD 496
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEA---KDHQTLNNPVEACLIAKITQELVKNE 1235
+ K+ N +P++F++T L E KD +++ N EA + I + +
Sbjct: 497 VE------KQLHNNLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIAKFYLGTG 550
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I KDIGII+PY Q NLI+ + +E+ ++D +QGR+K+ I++S VRS+ +N
Sbjct: 551 INPKDIGIISPYADQVNLIQDKI---PIEVKSVDGFQGREKEIIIISTVRSN---KNKDI 604
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
L D R+NVA+TRAK+KLI++G+ TL
Sbjct: 605 GFLKDLRRLNVAITRAKRKLIVIGNKNTL 633
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
++ ++ + GD V++ST + +G + E + V+F K +
Sbjct: 64 SEKIETEISVGDMVLISTGYPLRSDLTGTVVEKGARFIKVAFEKSI----------PKWT 113
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
L + RID +F M NL+ L + + + + AP+ ++
Sbjct: 114 LKKKVRIDLYANDVTFRRMEDNLMHLNTKGKNALEYS---LKKRAPK--------ENKKE 162
Query: 937 SYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTS 995
YI + +KSLN+ Q+ A+ + +++ LI G GTGKT T+V ++ + + +L+T+
Sbjct: 163 KYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQSNKVLVTA 222
Query: 996 YTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKEIQKHCLS--AMNINSVEEIKKRLDQVK 1052
+NSAVDN+L +L +++ + R+G + V KE + L+ A N +I K +++
Sbjct: 223 ESNSAVDNILDRLSQNKKLKITRLGHPQRVSKENIAYSLAYKAENHQLTGKINKNYKRIE 282
Query: 1053 VVAVTCLGITNP 1064
++ T T P
Sbjct: 283 QISETRDRFTKP 294
>gi|45359144|ref|NP_988701.1| DNA helicase [Methanococcus maripaludis S2]
gi|45048019|emb|CAF31137.1| putative DNA helicase [Methanococcus maripaludis S2]
Length = 633
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 157/278 (56%), Gaps = 25/278 (8%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T + +L D KFD+ ++DE Q+T P SL P++ + K ++ GDH QLPP V S
Sbjct: 362 VVVATNSMAGSEILEDYKFDIAVIDEGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLS 421
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
E ++ +LF R+ +EHP+ LQ QYRM + IME SN + Y ++L IA+
Sbjct: 422 DELE---LKKTLFERMIQEHPEFSKILQVQYRMNEKIMEFSNEMFYENKL------IAHE 472
Query: 1173 KIKVSDL----SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKIT 1228
+K +L + S K+ +N +P+ F+N D + ++ N EA + +I
Sbjct: 473 SVKSQNLLEIVENVSNEDKDIINE-KPLQFINVD--GEEKQNSFKSSYNVEEAEKVLEIV 529
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+L K EI + +ITPY++Q I L+ +++ ++D +QGR+ + I++SFVR+S+
Sbjct: 530 SKLQKYEIP---VSVITPYDAQVKYISKMLNTDKIDVKSVDGFQGRENEVIVISFVRTSK 586
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L D R+NVA+TRAK+KLI+VGS L K
Sbjct: 587 ------MGFLKDLKRLNVAVTRAKRKLIVVGSKNLLIK 618
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A+++ L A+D LI G PGTGKTST+ + +R ++ T+ +N AVDN+
Sbjct: 172 LNEYQKEAVLEALAARDLYLIHGPPGTGKTSTISEVILQEALRKNKVIATADSNIAVDNI 231
Query: 1005 LIKL-KSQSIDFVRIGRHEVVHKEIQKHCLSA 1035
L + K +S VRIG + K++ K+ L
Sbjct: 232 LSNISKHESFKIVRIGHPSRISKKLIKYSLQT 263
>gi|425781089|gb|EKV19071.1| DNA helicase, putative [Penicillium digitatum PHI26]
gi|425783223|gb|EKV21082.1| DNA helicase, putative [Penicillium digitatum Pd1]
Length = 690
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 159/588 (27%), Positives = 255/588 (43%), Gaps = 121/588 (20%)
Query: 835 ESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDE 887
E D G++T V ++F R G S + D + E+W ++ D
Sbjct: 128 EKDTEKGVEGVVTRTGDRAVWIAFG---RQGGGGMSKEEDEAVEELWGKKVWAMKLAND- 183
Query: 888 IMTSFSVMRYNLVQLF-LQSAQSSQLRRMIVDLEAP-RFDS---GSVFSQDPALSYIWSE 942
++ MR + ++ + + S R+ P + DS G V DP
Sbjct: 184 --VTYRRMRQTMEKMVKMTETEYSHFMRVAFGHTTPLQLDSEACGPVEFTDP-------- 233
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+LND Q+ AI L A+D ALI G PGTGKT T++ + L+ R +L+ +N +VD
Sbjct: 234 -TLNDSQKDAIRFALAARDIALIHGPPGTGKTHTLIELILQLVRRKKRVLVCGPSNVSVD 292
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK----- 1052
N++ +L + + VRIG + + +H L + S V++I+K +D+ +
Sbjct: 293 NIVERLAPKKVPVVRIGHPARLLPSVLEHSLEVLTQTSDAGGIVKDIRKEIDEKQASIRK 352
Query: 1053 -------------------------------------VVAVTCLGITNPLLTDKKFDVCI 1075
VV T G L ++KFDV I
Sbjct: 353 TRSGRERRGIYDDLKLLRKEFRQRESKCVDNLVRESSVVLATLHGAGGHQLKNQKFDVVI 412
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST--EARENG-------------M 1120
+DEA Q L+ A K VL GDH QLPP V+ST + +EN M
Sbjct: 413 IDEASQALEAQCWISLLGAEKVVLAGDHLQLPPTVKSTGQKPKENNSKGTEDKTDTNTDM 472
Query: 1121 EI--------SLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIAN 1171
EI +LF RL H I L +QYRM + IM + +Y +L IA+
Sbjct: 473 EILKGVSLERTLFDRLLALHGPGIKRMLTTQYRMHEKIMRFPSDELYEGKL------IAS 526
Query: 1172 AKIKVSDLSSCSPWLKEALNPCR-PVIFVNTDMLPAYEAKDHQ----------TLNNPVE 1220
+K L P+ E + + P++F +T E + + + +N +E
Sbjct: 527 DAVKDRLLIDL-PYDVEGTDDTQEPLVFWDTQGGDFPEKAEDEISKKGVLLGDSKSNEME 585
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDC 1278
A ++A+ L+ + + + +ITPYN Q L+ L +E+ ++D +QGR+K+
Sbjct: 586 AMVVARHVDNLINAGVRPESVAVITPYNGQLALLSRILREKYPGLELGSVDGFQGREKEA 645
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
++VS VRS+ LG+ R+NVA+TR K+ L + G T+S+
Sbjct: 646 VVVSLVRSNAERE---VGFLGEKRRLNVAMTRPKRHLCICGDSETISQ 690
>gi|340624895|ref|YP_004743348.1| putative DNA helicase [Methanococcus maripaludis X1]
gi|339905163|gb|AEK20605.1| putative DNA helicase [Methanococcus maripaludis X1]
Length = 633
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/278 (35%), Positives = 157/278 (56%), Gaps = 25/278 (8%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T + +L D KFDVC++DE Q+T P SL P++ + K ++ GDH QLPP V S
Sbjct: 362 VVVATNSMAGSEILEDYKFDVCVIDEGSQSTEPSSLIPIVRSRKLIIAGDHKQLPPTVLS 421
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
E ++ +LF R+ ++HP+ LQ QYRM + IME SN + Y ++L IA+
Sbjct: 422 DELE---LKKTLFERMIQDHPEFSKILQVQYRMNEKIMEFSNEMFYENKL------IAHE 472
Query: 1173 KIKVSDL----SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKIT 1228
+K +L + S K+ +N + + F+N D + ++ N EA + +I
Sbjct: 473 SVKSQNLIEIVENVSNEDKDIINE-KTLQFINVD--GEEKQNSFKSSYNVEEAEKVLEIV 529
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+L K EI + +ITPY++Q I L+ +++ ++D +QGR+ + I++SFVR+S+
Sbjct: 530 SKLQKYEIP---VSVITPYDAQVKYISKMLNTDKIDVKSVDGFQGRENEVIVISFVRTSK 586
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L D R+NVA+TRAK+KLI+VGS L K
Sbjct: 587 ------MGFLKDLRRLNVAVTRAKRKLIVVGSKNLLIK 618
Score = 63.9 bits (154), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A+++ L+A+D LI G PGTGKTST+ + +R ++ T+ +N AVDN+
Sbjct: 172 LNEYQKEAVLEALSARDLYLIHGPPGTGKTSTISEVILQEALRKNKVIATADSNIAVDNI 231
Query: 1005 LIKL-KSQSIDFVRIGRHEVVHKEIQKHCL 1033
L + K +S VRIG + K++ K+ L
Sbjct: 232 LSNISKHESFKIVRIGHPSRISKKLMKYSL 261
>gi|254167906|ref|ZP_04874755.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289596630|ref|YP_003483326.1| DNA helicase [Aciduliprofundum boonei T469]
gi|197623197|gb|EDY35763.1| DNA helicase, putative [Aciduliprofundum boonei T469]
gi|289534417|gb|ADD08764.1| DNA helicase [Aciduliprofundum boonei T469]
Length = 655
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 172/319 (53%), Gaps = 21/319 (6%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
+ + I+++ A + + IK+ L V+ T + LL + FD ++DEA Q+
Sbjct: 336 IQRRIEEYVKKAKKMEE-KVIKRVLKNADVICTTNSTAGSELLYNMDFDFVVIDEATQSI 394
Query: 1084 LPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P L P++ ++++ GDH QLPP + S +A+ ++++LF R + +P L+ QY
Sbjct: 395 EPSCLIPMIKGDRYIMAGDHRQLPPTIMSYKAK--ALQLTLFERFIKLYPHLSITLRVQY 452
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIK---VSDLSSCSPWLKEALNP-CRP-VIF 1198
RM + IM+ + L Y D L IA+ +K + DL + L+E + C P I
Sbjct: 453 RMNEKIMKFPSKLFYKDLL------IAHPSVKNRSIEDLGVSAENLEEPMRSICEPQSII 506
Query: 1199 VNTDMLPAYEAK--DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
V DM E K + N EA + L+K ++ K IGIITPY+ Q +L+R
Sbjct: 507 VFLDMQNCKEEKRGGSTSYYNECEAETVKDTVDCLLKIGLKEKHIGIITPYDDQVDLLRS 566
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
+ +EI ++D +QGR+KD I++SFVRS++ L D R+NVA+TRAK+KLI
Sbjct: 567 --MIEDIEIKSVDGFQGREKDVIIISFVRSND---KGDIGFLDDLRRLNVAITRAKRKLI 621
Query: 1317 MVGSCRTLSKVPLLKLLIN 1335
M+G+ +TLS + LI+
Sbjct: 622 MLGNAKTLSSNEVYTKLID 640
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
+ LN+ QR+A+ + L + LI G PGTGKT+T+ + ++ +G +L T+ +N AVD
Sbjct: 175 RRLNNFQRKAV-ESLIGSELFLIHGPPGTGKTTTLAEGIIQMVKKGYRVLATADSNVAVD 233
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE-----EIKKRLDQVK 1052
NL+ KL + ++ VR+G + K I +H L + +E EI +++D ++
Sbjct: 234 NLVEKL-AHKVNVVRVGHPARIGKSIIEHTLDYIVAQDIEYKKAMEIWEKIDDMR 287
>gi|423312653|ref|ZP_17290590.1| hypothetical protein HMPREF1058_01202 [Bacteroides vulgatus
CL09T03C04]
gi|392687387|gb|EIY80680.1| hypothetical protein HMPREF1058_01202 [Bacteroides vulgatus
CL09T03C04]
Length = 1113
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 167/569 (29%), Positives = 256/569 (44%), Gaps = 98/569 (17%)
Query: 824 LRSGDYVILSTESDRL------AVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLL 877
R+GD V+L ++ L V G I +I+ + + LR RN+S + L
Sbjct: 587 FRTGDVVVLYERNNDLDNATNKMVFKGNIEQITDTELRIR----LRATQRNASVFS---L 639
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
+ ++ D + T+F M Y + FL + +++ R +++ PRFDS F + AL+
Sbjct: 640 DSRYAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRPPRFDSS--FDEAIALT 694
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLTS 995
DD R +K +A+DY L++G PGTGKTS + + +S ILL +
Sbjct: 695 --------GDDFERVALKAESARDYFLLVGPPGTGKTSRALRRMVEHFYAASSMQILLLA 746
Query: 996 YTNSAVDNLLIKLK--SQSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD-- 1049
YTN AVD + L + ID++R+G + H L + NS E+ R+
Sbjct: 747 YTNRAVDEICQSLSFITPCIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNIRMADC 806
Query: 1050 QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLVG 1101
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+G
Sbjct: 807 RVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILIG 866
Query: 1102 DHYQLPPLVQSTEA---------RENGM---EISLFRRL-----SEEHPQAISALQSQYR 1144
DH QLP ++ RE G+ + SLF RL EE P+AI L Q R
Sbjct: 867 DHKQLPAVILQNSGHSEVHDEGLREAGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQGR 926
Query: 1145 MCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM- 1203
M G+ N Y +L + P E + PV F+ +
Sbjct: 927 MHPGVAFFPNKAFYAGKLE----------------ALGLPHQLEHIEA--PVRFIPSKQD 968
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL- 1258
L + K N EA ++A + +E+ E D +G+ITPY SQ LIR L
Sbjct: 969 LESVSGK-----TNRYEAQIVAGLAKEVYLAHEEEFDPNRTLGVITPYRSQIALIRKELQ 1023
Query: 1259 -----SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW-----HRINVAL 1308
++S + I T+++YQG ++D I+ SF + +L + ++NVAL
Sbjct: 1024 ALAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVAL 1083
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
TRA+K+L + G LS + + L+ +
Sbjct: 1084 TRARKQLFITGVPEILSHNSIYQYLLKTI 1112
>gi|255691334|ref|ZP_05415009.1| DNA helicase [Bacteroides finegoldii DSM 17565]
gi|260622976|gb|EEX45847.1| putative DNA helicase [Bacteroides finegoldii DSM 17565]
Length = 628
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 206/455 (45%), Gaps = 87/455 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 189 LNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHREPQVMVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ M
Sbjct: 249 CEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIREMG-GRMRRG 307
Query: 1040 SVEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
S EE ++ R+ D +V+A T + + LL ++F +D
Sbjct: 308 SYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFID 367
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + A + VL GDH QLPP ++ EA G+E +L ++ + P ++S
Sbjct: 368 EAAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCIEAARGGLEYTLMEKVVRQKPSSVS 427
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM + IM+ + Y L + + D S P+
Sbjct: 428 LLKVQYRMNEAIMQFPSDWFYQGELEAAPEVRYRG---ILDFDS-------------PMS 471
Query: 1198 FVNTDMLPAYEA----------KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
+++T + +E K L I +I +E + E D G+I+PY
Sbjct: 472 WIDTSEMEFHEEFVGESFGRINKQEANLLLEELEAYINRIGKERILE--ERIDFGLISPY 529
Query: 1248 NSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+Q +R + SS + ++T+D +QG+++D + +S VR++E + L
Sbjct: 530 KAQVQYLRSKIKGSSFLRPLRSLITVNTVDGFQGQERDVVFISLVRANEEGQ---IGFLN 586
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+ KL+++G TL+K P K L+
Sbjct: 587 DLRRMNVAITRARMKLVILGEAATLTKHPFYKRLM 621
>gi|418711069|ref|ZP_13271835.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
UI 08368]
gi|410768669|gb|EKR43916.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
UI 08368]
gi|456972499|gb|EMG12888.1| AAA domain protein [Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 634
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/457 (28%), Positives = 209/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L + ++ I +R+G R +V+ EI K
Sbjct: 248 LAESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKFFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|329957754|ref|ZP_08298229.1| putative DNA helicase [Bacteroides clarus YIT 12056]
gi|328522631|gb|EGF49740.1| putative DNA helicase [Bacteroides clarus YIT 12056]
Length = 632
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 210/455 (46%), Gaps = 81/455 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D A++ G PGTGKT+T+V A+ L R +L+ + +N AVD +
Sbjct: 190 LNSTQETAVNKVLCARDTAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNMAVDWI 249
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQKHCLSAMN-- 1037
KL + ++ +RIG R E + KE+++ A +
Sbjct: 250 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFENHPLYPELWSIRKELRQLGGKARHGS 309
Query: 1038 INSVEEIKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDE 1078
+ E I+ R+ D V+A T + + LL ++F +DE
Sbjct: 310 YDEREGIRSRMSRLRDRATTLEIQINAELFDSAHVIASTLVSSNHRLLNGRRFGTLFIDE 369
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + A + VL GDH QLPP ++ EA +G+E +L ++ P +S
Sbjct: 370 AAQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARSGLEQTLMEKVVANKPSVVSL 429
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM S+ Y L + EI + I L+ P+ +
Sbjct: 430 LKVQYRMHEDIMRFSSDWFYDGALEA-APEIRHRGI---------------LDWDTPITW 473
Query: 1199 VNTDMLPAYEAKDHQTLN--NPVEACLIAK----ITQELVKNEI--EGKDIGIITPYNSQ 1250
++T + E +T N EA L+ K Q + + I E D G+I+PY +Q
Sbjct: 474 LDTSEMDFKEEFVGETFGRINKEEAHLLLKELEAYIQRIGGSRILEERIDFGLISPYKAQ 533
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R + S+ + ++T+D +QG+++D I +S VR++E + L D
Sbjct: 534 VQYLRGKIKSSASLRPYRSLITVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLR 590
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G TLS K L+ V
Sbjct: 591 RMNVAITRARMKLVILGEATTLSHHTFYKRLLEYV 625
>gi|418667848|ref|ZP_13229253.1| AAA domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410756293|gb|EKR17918.1| AAA domain protein [Leptospira interrogans serovar Pyrogenes str.
2006006960]
Length = 634
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 209/456 (45%), Gaps = 79/456 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D L
Sbjct: 189 LNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDLL 248
Query: 1005 LIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCLS 1034
+ + ++ I +R+G R +V+ EI K
Sbjct: 249 VESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAKK 306
Query: 1035 AMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTDK 1069
V+E+KK + +++ + L ++P +L ++
Sbjct: 307 FKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILENR 366
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 367 TFDFCVLDESSQALEPTFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKAV 423
Query: 1130 E--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
E E I L +QYRM I + Y L G E K + S+ P+L
Sbjct: 424 ENLESYGRIFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFLN 479
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
+++T + E +++NP EA L ++ L +N+ +I I++PY
Sbjct: 480 -------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSPY 532
Query: 1248 NSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + RI
Sbjct: 533 RAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRRI 589
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
NV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 590 NVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|392964636|ref|ZP_10330056.1| AAA ATPase [Fibrisoma limi BUZ 3]
gi|387846019|emb|CCH52102.1| AAA ATPase [Fibrisoma limi BUZ 3]
Length = 632
Score = 160 bits (406), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 215/453 (47%), Gaps = 87/453 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVD- 1002
LN Q A+ K+ +A + A++ G PGTGKT+T+V A+KAL+ + +L+ + +N+AVD
Sbjct: 178 LNPSQVAAVDKIRSANELAIVHGPPGTGKTTTIVQAIKALIRQANQKVLVVAPSNTAVDL 237
Query: 1003 ----------NLL------------------------------IKLKSQSIDFV------ 1016
N+L KLK Q+ +F
Sbjct: 238 LSERLHDQGLNVLRVGNPARVSERLMALTLDHKVNEHPYMKEAKKLKKQANEFRNMAHKY 297
Query: 1017 --RIGRHEVVHKEI---QKHCLSAMNINSVEE-IKKRLDQVKVVAVTCLGITNPLLTDKK 1070
+ G+ E ++ + H + NS + I + + +V+ T +G + + +
Sbjct: 298 KRQFGKAEREQRKALFDEAHRIMKDVANSEQYVIDDLIARAQVITATLVGANHHTVRNLT 357
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
+ ++DEAGQ P P++ A K VL GDH QLPP ++S EA G+ +L +
Sbjct: 358 YHTVVIDEAGQALEPACWIPILKAQKVVLAGDHCQLPPTIKSPEAARRGLSETLLEKCIA 417
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
HP+A+S L QYRM + IM S+ + Y +L + +A + D S
Sbjct: 418 MHPEAVSLLDEQYRMHEHIMGYSSEVFYEKKLKAHA-SVARHTLFDGDTS---------- 466
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKN---EIEGKD---IGII 1244
++FV+T E D + NP EA L+ K +LV + + +D I +I
Sbjct: 467 -----LVFVDTAGCGFDEKLDGTSSTNPDEAALLVKHLTQLVADLSTYYKPQDFPTIAVI 521
Query: 1245 TPYNSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
+PY Q +++ ++ + + ++TID +QG+++D + +S VRS+ +
Sbjct: 522 SPYKQQIAILKEQIANTPELQPYSHVISVNTIDSFQGQERDIVYISMVRSNA---DGDIG 578
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPL 1329
L D R+NVA+TRA+KKL++VG TL+ +P
Sbjct: 579 FLADIRRMNVAMTRARKKLVIVGDSATLAGLPF 611
>gi|294776847|ref|ZP_06742310.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|319643319|ref|ZP_07997946.1| hypothetical protein HMPREF9011_03547 [Bacteroides sp. 3_1_40A]
gi|345519961|ref|ZP_08799368.1| DNA helicase [Bacteroides sp. 4_3_47FAA]
gi|254836171|gb|EET16480.1| DNA helicase [Bacteroides sp. 4_3_47FAA]
gi|294449323|gb|EFG17860.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|317385066|gb|EFV66018.1| hypothetical protein HMPREF9011_03547 [Bacteroides sp. 3_1_40A]
Length = 1113
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 257/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVILSTESDRL------AVASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L ++ L V G I +I+ + + LR RN+S DS
Sbjct: 587 FRTGDVVVLYERNNDLDNATNKMVFKGNIEQITDTELRIR----LRATQRNASVFSPDSR 642
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ PRFDS F + AL
Sbjct: 643 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRPPRFDSS--FDEAIAL 693
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K +A+DY L++G PGTGKTS + + +S ILL
Sbjct: 694 T--------GDDFERVALKAESARDYFLLVGPPGTGKTSRALRRMVEHFYAASSMQILLL 745
Query: 995 SYTNSAVDNLLIKLKSQS--IDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S + ID++R+G + H L + NS E+ R+
Sbjct: 746 AYTNRAVDEICQSLSSITPCIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNIRMAD 805
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 806 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 865
Query: 1101 GDHYQLPPLVQSTEA---------RENGM---EISLFRRL-----SEEHPQAISALQSQY 1143
GDH QLP ++ RE G+ + SLF RL EE P+AI L Q
Sbjct: 866 GDHKQLPAVILQNSGHSEVHDEGLREAGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQG 925
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y +L + P E + PV F+ +
Sbjct: 926 RMHPGVAFFPNKAFYAGKLE----------------ALGLPHQLEHIEA--PVRFIPSKQ 967
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +G+ITPY SQ LIR L
Sbjct: 968 DLESVSGK-----TNRYEAQIVAGLAKEVYLAHEEEFDPNRTLGVITPYRSQIALIRKEL 1022
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW-----HRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1023 QALAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1082
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G LS + + L+ +
Sbjct: 1083 LTRARKQLFITGVPEILSHNSIYQYLLKTI 1112
>gi|261350062|ref|ZP_05975479.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
gi|288860848|gb|EFC93146.1| putative DNA helicase [Methanobrevibacter smithii DSM 2374]
Length = 658
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 153/269 (56%), Gaps = 28/269 (10%)
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLS 1129
KF+V I+DEA Q T+P L PL A +F+L GDH QLPP + S +A + +E +LF L
Sbjct: 379 KFNVVIVDEASQATIPSILIPLSKARRFILAGDHKQLPPTIISKKA--HFLEKTLFEELI 436
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGS-------DEIAN----AKIKVSD 1178
+++P S L QYRM +M+ N Y L S DEI + +++K SD
Sbjct: 437 KKYPNKSSLLNVQYRMNSFLMKFPNLEFYNGNLKSDSSVDNINLDEIIDLEELSRLKESD 496
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEA---KDHQTLNNPVEACLIAKITQELVKNE 1235
+ K+ N +P++F++T L E KD +++ N EA + I + +
Sbjct: 497 VE------KQLHNNLKPLLFIDTSNLKNNEEKHLKDSKSIINQSEADIATSIAKFYLGTG 550
Query: 1236 IEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTS 1295
I KDIGII+PY Q NLI+ + +E+ ++D +QGR+K+ I++S VRS+ +N
Sbjct: 551 INPKDIGIISPYADQVNLIQDKI---PIEVKSVDGFQGREKEIIIISTVRSN---KNKDI 604
Query: 1296 SLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
L D R+NVA+TRAK+KLI++G+ TL
Sbjct: 605 GFLKDLRRLNVAITRAKRKLIVIGNKNTL 633
Score = 59.3 bits (142), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 31/217 (14%)
Query: 817 TKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
++ ++ + GD V++ST + +G + E + V+F K +
Sbjct: 64 SEKIETEISVGDMVLISTGYPLRSDLTGTVVEKGARFIKVAFEKSI----------PKWT 113
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
L + RID +F M NL+ L + + + S+ +DP
Sbjct: 114 LKKKVRIDLYANDVTFRRMEDNLMHLNTKGKNALEY---------------SLKKRDPKE 158
Query: 937 S----YI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
+ YI + +KSLN+ Q+ A+ + +++ LI G GTGKT T+V ++ + + +
Sbjct: 159 NKKEKYIDFIDKSLNESQKNAVRNAVNTENFFLIHGPFGTGKTRTLVELIQQEVRQSNKV 218
Query: 992 LLTSYTNSAVDNLLIKL-KSQSIDFVRIGRHEVVHKE 1027
L+T+ +NSAVDN+L +L +++ + R+G + V KE
Sbjct: 219 LVTAESNSAVDNILDRLSQNKKLKITRLGHPQRVSKE 255
>gi|429962455|gb|ELA41999.1| hypothetical protein VICG_01016 [Vittaforma corneae ATCC 50505]
Length = 1081
Score = 160 bits (405), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/393 (30%), Positives = 190/393 (48%), Gaps = 81/393 (20%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LND+QR+A+ L ++Y +I GMPGTGK++ + ++ L+ G +LL YT+ A+ N+
Sbjct: 769 LNDEQRQALFLSLNCENYKIIHGMPGTGKSTVISLLIRILISYGKKVLLVCYTHLAIHNI 828
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L K +G+ + + + + S E+ + + +VA TC +P
Sbjct: 829 LKK----------VGKVKCYRAKKED-----LKFKSYAELAQHFKDIDLVAGTCYSFGDP 873
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ ++KFD C++DE Q L +SL P+ A +F +VGDH QL PL + + + +SL
Sbjct: 874 VYLNRKFDYCVIDEGSQMHLLLSLIPISIADRFCIVGDHLQLKPLCK----KSRDLNLSL 929
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L + S L QYRM IM+LSN L Y +RL I LS+
Sbjct: 930 FEFLIDH----CSTLTRQYRMGDLIMKLSNTLFYDNRL-----------IGFGGLST--- 971
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
V+F+++D + +++K E K+ I+
Sbjct: 972 -----------VVFLDSDRV-------------------------DVLKTVKEVKNCAIL 995
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+NS+ I S V + TID++QG + D I+V F + C ++ R+
Sbjct: 996 CYFNSKVREI--SNINKDVIVTTIDRFQGSESDEIIVIF----DPVEKC--EIIESRERL 1047
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
NVALTRA+ KL +VGS R + ++PL + LI+ V
Sbjct: 1048 NVALTRARTKLTLVGSKRDMLEIPLFRQLIDMV 1080
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 62/264 (23%)
Query: 446 IVHPDVLVSGTRVAASFSC---PRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKEIP 502
I+ D L++ T + A+ C P L L S +LG L+H++ Q L+++
Sbjct: 152 ILIEDDLLTVTSLCAALKCINIPLLQTLVSDLSFEFAHPSLVLGILIHKLIQMALIEKKA 211
Query: 503 TMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPTVD 562
T+ FL A+ ++ N+ LY+C +++ K + I K + II F D
Sbjct: 212 TLTFLVSTAKSIIMDNLILLYSCNISD----KEALNEILKNIKNIIRFLDRN-------- 259
Query: 563 FGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGK 622
+V +E ++ YGLKG ID ++S +E KTGK
Sbjct: 260 -----------FQVEKVEHKVFSTVYGLKGSIDC-----LDSN--------FVIEIKTGK 295
Query: 623 IPNGQSSMEHRAQVILYTLLMSERYLKHIDSG-------------------LLYYLQSDQ 663
S+EHR+Q ILY+LLM E +K+ S LLYY++S
Sbjct: 296 FL----SLEHRSQAILYSLLMMETDMKNRRSAHDHQNSMSDAKLRTNTYTPLLYYVKSGD 351
Query: 664 TQGVMVQRSDLVGLIMRRNEFAND 687
+ +Q ++V L+ RN+ A +
Sbjct: 352 FVDIDLQHEEIVHLLKLRNDIATN 375
>gi|268324732|emb|CBH38320.1| putative ATP-dependent helicase [uncultured archaeon]
Length = 658
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/285 (35%), Positives = 151/285 (52%), Gaps = 21/285 (7%)
Query: 1051 VKVVAVTCLGITN-----PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQ 1105
+K AV C TN +L +KFD ++DEA Q+T P +L ++ A +F++ GDH Q
Sbjct: 363 IKAAAVIC--TTNSTAGSEILKGEKFDFAVIDEATQSTEPSALIAVLKAKRFIMAGDHKQ 420
Query: 1106 LPPLVQSTEARENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSC 1164
LPP V + EA SLF RL H I L QYRM + I E N Y +L
Sbjct: 421 LPPTVLNEEAACRSFTKSLFERLLALHGDKIRVMLDVQYRMNEEIAEFPNWEFYDGKLK- 479
Query: 1165 GSDEIANAKIKVSDLSSCSPW-LKEALNPCRPVIFVNTDMLPAYEA---KDHQTLNNPVE 1220
A+ ++K L P + E +P +F++T E K + NP E
Sbjct: 480 -----ADEQVKRRTLMDILPESVDEESEDVKPFLFIDTGGNAELEERVRKGSTSRENPGE 534
Query: 1221 ACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCIL 1280
A L+ + + L+ I +DI +I+PY+ Q I+ L V +EI T+D +QGR+K+ ++
Sbjct: 535 ARLVKDVAERLLNRGIRPEDIAVISPYDDQVVHIKRMLHVEGLEIKTVDGFQGREKEVVI 594
Query: 1281 VSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
VSFVRS+ ++ T L D R+NV++TRAK+KL+++G TL
Sbjct: 595 VSFVRSN---KSRTIGFLKDLRRLNVSITRAKRKLVLIGDSNTLE 636
Score = 70.5 bits (171), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 7/133 (5%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
++ F+Q + + S+ LN Q+ A+I+ L A+D+ LI G PGTGKT T V + L
Sbjct: 161 NTAPAFTQVDKIEFFNSK--LNKSQQEAVIRSLAARDFFLIHGPPGTGKTITCVEVIAQL 218
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM-----NIN 1039
+ RG IL + +N AVDNL+ +L ++ VRIG + +++ L + +
Sbjct: 219 IKRGNKILTAADSNVAVDNLVERLDRIGVNVVRIGHPARIIPALRRRSLDYLVQDEPDYR 278
Query: 1040 SVEEIKKRLDQVK 1052
+E +KR ++K
Sbjct: 279 KAQEFRKRAYELK 291
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 316 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 372
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 373 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 432
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 433 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 478
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 479 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 538
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 539 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 597
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 598 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 657
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 658 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERVK-KGFDFQ----WPQ- 710
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 711 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 766
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 767 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 823
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 824 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 864
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 392 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 448
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 449 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 508
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 509 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 554
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 555 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 614
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 615 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 673
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 674 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 733
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 734 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 786
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 787 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 842
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 843 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 899
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 900 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 940
>gi|150004347|ref|YP_001299091.1| hypothetical protein BVU_1793 [Bacteroides vulgatus ATCC 8482]
gi|149932771|gb|ABR39469.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
Length = 1108
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 257/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVILSTESDRL------AVASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L ++ L V G I +I+ + + LR RN+S DS
Sbjct: 582 FRTGDVVVLYERNNDLDNATNKMVFKGNIEQITDTELRIR----LRATQRNASVFSPDSR 637
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ PRFDS F + AL
Sbjct: 638 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRPPRFDSS--FDEAIAL 688
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K +A+DY L++G PGTGKTS + + +S ILL
Sbjct: 689 T--------GDDFERVALKAESARDYFLLVGPPGTGKTSRALRRMVEHFYAASSMQILLL 740
Query: 995 SYTNSAVDNLLIKLKSQS--IDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S + ID++R+G + H L + NS E+ R+
Sbjct: 741 AYTNRAVDEICQSLSSITPCIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNIRMAD 800
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 801 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 860
Query: 1101 GDHYQLPPLVQSTEA---------RENGM---EISLFRRL-----SEEHPQAISALQSQY 1143
GDH QLP ++ RE G+ + SLF RL EE P+AI L Q
Sbjct: 861 GDHKQLPAVILQNSGHSEVHDEGLREAGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQG 920
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y +L + P E + PV F+ +
Sbjct: 921 RMHPGVAFFPNKAFYAGKLE----------------ALGLPHQLEHIEA--PVRFIPSKQ 962
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +G+ITPY SQ LIR L
Sbjct: 963 DLESVSGK-----TNRYEAQIVAGLAKEVYLAHEEEFDPNRTLGVITPYRSQIALIRKEL 1017
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW-----HRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1018 QALAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1077
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G LS + + L+ +
Sbjct: 1078 LTRARKQLFITGVPEILSHNSIYQYLLKTI 1107
>gi|396082186|gb|AFN83797.1| DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 878
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/396 (30%), Positives = 187/396 (47%), Gaps = 91/396 (22%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LNDDQR A+ L ++Y +I GMPGTGK++ + +K L+ +LL YTN A+ N+
Sbjct: 567 LNDDQRSALFLSLNCRNYRIIHGMPGTGKSTLICLLIKILVHLKKKVLLICYTNLALANI 626
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
KL I G+ K + E + V++V TC +P
Sbjct: 627 TKKL--DGIKIYTAGKEGFFFK-------------TTAEAIAFFENVELVVGTCFSFADP 671
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ +++FD C++DE Q L ++L P+ ++KFV+VGDH QL PL +S++ + +SL
Sbjct: 672 VYVNRRFDFCVVDEGSQMHLLLALIPVSISTKFVIVGDHLQLKPLSRSSKE----LSLSL 727
Query: 1125 FRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
F L E+H S L++QYRM IM LSN L Y D+L
Sbjct: 728 FEYLLREDH----SKLRTQYRMGNEIMRLSNTLFYNDQL--------------------- 762
Query: 1184 PWLKEALNPCRP--VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
+ RP V F++TD + D L E C
Sbjct: 763 ------IGEKRPSSVEFIDTDTI------DFIALVPSFEEC------------------- 791
Query: 1242 GIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSF--VRSSENPRNCTSSLLG 1299
I+ +N+Q +LIR + + T+D++QG + D ++V F V E +C
Sbjct: 792 TILCYFNAQVDLIREK---TRCIVETVDRFQGSEDDRVVVVFDPVSRCEVMESC------ 842
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
R+NVALTRA+K LI+VG+ + ++ +LK LI+
Sbjct: 843 --ERLNVALTRARKHLILVGNKSKMLEIDILKRLIS 876
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 110/246 (44%), Gaps = 45/246 (18%)
Query: 443 NFLIVHPDVLVSGTRVAASFSCPRRSVLDERL---KCSERSISALLGTLLHQIFQAGLMK 499
N+L+V D V+ T ++ S +C + + ++ K S + L+G ++H I + L++
Sbjct: 119 NYLLVEDDP-VAITTLSESLTCRNKRYISSKIASIKLSYTDVRVLIGVIVHSIMERALVQ 177
Query: 500 EIPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTP 559
+ FL A+ + +N+ +Y CG++E KT + K++ I +FK+ +
Sbjct: 178 KNFAFDFLINQAKRGISENVMLMYKCGIDE----KTALNETLKLIRNIHMFKNHK----- 228
Query: 560 TVDFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
E + E+ + + +KG DA G+ LE K
Sbjct: 229 --------------FEAIETEKRLMSLLFNIKGDADAI-------------GIDTVLEIK 261
Query: 620 TGKIPNGQSSMEHRAQVILYTLLMSERYLKHIDSGLLYYLQSDQTQGVMVQRSDLVGLIM 679
+ K EHRAQVILY L++ E+ S LYY+ + + V ++ ++ L+
Sbjct: 262 STK----SQRPEHRAQVILYALMLKEKTGDDF-SPFLYYIPAGELVEVKLRHQEIRSLLN 316
Query: 680 RRNEFA 685
RN+ A
Sbjct: 317 LRNKIA 322
>gi|322707009|gb|EFY98588.1| DNA-binding protein SMUBP-2 [Metarhizium anisopliae ARSEF 23]
Length = 717
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 155/627 (24%), Positives = 267/627 (42%), Gaps = 148/627 (23%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSF---SKPLRLPGRNS 869
+R+GD V+++ + A + G++T++ R V+V+ + PGR
Sbjct: 87 IRTGDIVLVAEQPAGSAKKREVRELERKGSRGVVTKVQRGFVNVALDDGKDEVPFPGR-- 144
Query: 870 SSDADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSG 927
VW + DE+ ++ M + +L + A+ S R++ L +P
Sbjct: 145 ----------VWLVKLADEV--TYRRMNQTMEKLQGMVEAEYSSFMRVLFGLSSPS-PLP 191
Query: 928 SVFSQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM 986
S+DP + I W++ +LND Q+ AI L +++ ALI G PGTGKT T++ + ++
Sbjct: 192 QDLSRDPQVGDIEWTDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQMVK 251
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----V 1041
R +L+ +N +VDN++ +L + +R+G + + H L + S V
Sbjct: 252 RKQRVLVCGPSNISVDNIVERLSPHKLLILRLGHPARLLPSVLHHSLDVLTNTSEAGAIV 311
Query: 1042 EEIKKRLDQ------------------------------------------VKVVAVTCL 1059
++++ +D KVV T
Sbjct: 312 KDVRAEMDAKQASIKKTKSGKERRDIYSDLKELRKEYRERERRCVSNLISGSKVVLATLH 371
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN- 1118
G L +++FDV I+DEA Q PL+ A K V GDH QLPP ++S ++ N
Sbjct: 372 GSGGFQLRNEEFDVVIIDEASQALEAQCWVPLLSARKAVCAGDHLQLPPTIKSLNSKANP 431
Query: 1119 -----------GM--EISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
GM E +LF RL H P L +QYRM + IM + +YG +L
Sbjct: 432 RPKDERLPIIKGMTLETTLFDRLLALHGPSIKRMLTTQYRMHEEIMRFPSEELYGSKL-- 489
Query: 1165 GSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP------ 1218
+A +K L +++ + P+IF++T E + +NP
Sbjct: 490 ----VAADAVKARLLKDLEYGVQDNEDTSAPLIFIDTQGGDFPERSEEDDKDNPKKGRGS 545
Query: 1219 ---------VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTI 1268
+EA L+ + +LV + +DI I+TPYN+Q ++ +E+ ++
Sbjct: 546 LHSESKSNEMEAALVLQHAGQLVGAGVRPEDIAIVTPYNAQLGVLAPLKEKFPGIELGSV 605
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN----------------------- 1305
D +QGR+K+ ++VS VRS NP + LG+ R+N
Sbjct: 606 DGFQGREKEAVIVSLVRS--NP-DGEVGFLGEKRRLNGEFNPSSSSPTPYNCSRHIAREI 662
Query: 1306 ------VALTRAKKKLIMVGSCRTLSK 1326
VA+TR ++ L ++G T+ +
Sbjct: 663 TLTFLAVAMTRPRRSLTVIGDSETVKR 689
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 486 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 542
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 543 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 602
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 603 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 648
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 649 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 708
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 709 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 767
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 768 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 827
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 828 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 880
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 881 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 936
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 937 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 993
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 994 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 1034
>gi|150402752|ref|YP_001330046.1| putative DNA helicase [Methanococcus maripaludis C7]
gi|150033782|gb|ABR65895.1| putative DNA helicase [Methanococcus maripaludis C7]
Length = 633
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 157/279 (56%), Gaps = 27/279 (9%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T + +L D KFDVC++DE Q+ P SL P++ + K ++ GDH QLPP V S
Sbjct: 362 VVVATNSMAGSEILEDYKFDVCVIDEGSQSMEPSSLIPIVLSRKLIIAGDHKQLPPTVLS 421
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
E ++ +LF RL E+P LQ QYRM + IME SN + Y ++L IA+
Sbjct: 422 EELE---LKKTLFERLISENPDFSKILQVQYRMNEKIMEFSNEMFYENKL------IAHE 472
Query: 1173 KIKVSDL----SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLIAKI 1227
+K +L + S K+ +N +P+ F+N + E +D ++ N EA + +I
Sbjct: 473 SVKSHNLLDIVENVSKEDKDIVNK-KPLQFINVN---GQEKQDSFKSSYNVEEAEKVDEI 528
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+L K EI + +ITPY++Q I + L+ +E+ ++D +QGR+ + I++SFVR+
Sbjct: 529 VSKLRKYEIP---VSVITPYDAQVKYISNKLNTDEIEVKSVDGFQGRENEVIVISFVRTD 585
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ L D R+NVA+TRA++KLI+VGS L K
Sbjct: 586 K------MGFLKDLRRLNVAVTRARRKLIVVGSKNLLIK 618
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+++ L A+D LI G PGTGKT T+ + +R ++ T+ +N AVDN
Sbjct: 171 SLNEYQKEAVLEALAARDLYLIHGPPGTGKTRTISEVILQEALRKNKVIATADSNIAVDN 230
Query: 1004 LLIKL-KSQSIDFVRIGRHEVVHKEIQKHCL 1033
+L + K +S VRIG + K++ K+ L
Sbjct: 231 ILSNISKYESFKIVRIGHPSRISKKLMKYSL 261
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 204/444 (45%), Gaps = 59/444 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V L M +L+T+ +N AVD
Sbjct: 459 LNHSQVYAVKSVLQ-KPLSLIQGPPGTGKTVTSASIVYHLATMSQGQVLVTAPSNVAVDQ 517
Query: 1004 LLIKLKSQSIDFVRIGR---------------HEVV-----HKEIQKHC---LSAMNINS 1040
L K+ + + VRI HE V H E+QK ++S
Sbjct: 518 LTEKIHTTGLKVVRITAKSREALESSISHLTLHEQVANNDTHVELQKLIQLKTEQGELSS 577
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E K + L V+ TC+G +P L+ KF ++DEA Q T P + P
Sbjct: 578 SDERKFKSLTRACEREILTNADVICCTCVGCGDPRLSKIKFRTVLIDEATQATEPECMIP 637
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
L F K V+VGDH QL P + S +A G+ SLF RL + I LQ QYRM +
Sbjct: 638 LTFGVKQLVMVGDHSQLGPTIMSKKAARAGLTQSLFERLVLLGNRPIR-LQVQYRMHPCL 696
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
E + + Y L G K V PW + P P+ F + ++ +
Sbjct: 697 SEFPSNMFYEGSLQNGVTAPERIKKNVD-----FPWPQ----PTTPMYF-HQNLGQEEIS 746
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------- 1262
+ N EA + K+ L K+ + IGI+TPY Q I + + +
Sbjct: 747 SSGTSFLNRTEAANVEKVVTRLFKSGVMPHQIGIVTPYEGQRAYIANYMLFNGSLKKELY 806
Query: 1263 --VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+E+ ++D +QGR+KD IL+S VRS+E+ L D R+NVALTRAK L+++G+
Sbjct: 807 KDIEVASVDAFQGREKDYILLSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGLVILGN 863
Query: 1321 CRTLSKVPLLKLLINKVGEQSGIL 1344
+ LSK L L+ E+ ++
Sbjct: 864 PKVLSKHALWHYLLTHYKEKGCLV 887
>gi|115478052|ref|NP_001062621.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|113630854|dbj|BAF24535.1| Os09g0130800 [Oryza sativa Japonica Group]
gi|215694894|dbj|BAG90085.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641090|gb|EEE69222.1| hypothetical protein OsJ_28445 [Oryza sativa Japonica Group]
Length = 981
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 157/598 (26%), Positives = 260/598 (43%), Gaps = 87/598 (14%)
Query: 823 TLRSGDYVILSTESDRLAVAS----GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
TL GD V + T +R + + G I + S++ + L R L
Sbjct: 369 TLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVT----LKSRRGDPTFSKLFG 424
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF-DSGSVFSQDPALS 937
+ RID+ + + N L L + Q + + + A F D + +
Sbjct: 425 KNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNL 484
Query: 938 YIWSEKSLNDD-------------QRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKA 983
W E +++DD Q +AI L K LI+ G PGTGKT + + +
Sbjct: 485 ADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIAC 544
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR-------------HEVVHKEIQK 1030
+ +G +L+T+ +N+AVDN++ KL +D VR+G E+V++ +QK
Sbjct: 545 AVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQK 604
Query: 1031 -----------------HCLS----AMNINSV-------------EEIKKRLDQVKVVAV 1056
HC+ A I + E I++ L VV
Sbjct: 605 FTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLS 664
Query: 1057 TCLGITNPLLTDKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
T +G +PL+ FD+ I+DEAGQ P P++ + +L GD QL P+V S EA
Sbjct: 665 TNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREA 724
Query: 1116 RENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRL----SCGSDEIA 1170
+ G+ +SL R S H + ++ L +QYRM I ++ +Y L S S +A
Sbjct: 725 MQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLA 784
Query: 1171 NAK-IKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
+ IK + ++ C+ L L+ P +N D + + N EA ++++
Sbjct: 785 DYPFIKETWITRCAFLL---LDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVL 841
Query: 1230 ELVKNEIEGKDIGIITPYNSQANLIRHSL----SVSSVEIHTIDKYQGRDKDCILVSFVR 1285
LV+ + I + +PY +Q L+R L S VE+ TID +QGR+ D +++S VR
Sbjct: 842 NLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVR 901
Query: 1286 SSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
S+ LGD R+NVA+TRA++ + +V T+ L L+ + + +
Sbjct: 902 SNTLG---AVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHGQV 956
>gi|169806076|ref|XP_001827783.1| superfamily I DNA or RNA helicase [Enterocytozoon bieneusi H348]
gi|161779069|gb|EDQ31095.1| superfamily I DNA or RNA helicase [Enterocytozoon bieneusi H348]
Length = 912
Score = 159 bits (403), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/393 (30%), Positives = 195/393 (49%), Gaps = 76/393 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q++A++ + K + +I GMPGTGK++ +V +K L+ ILL SYT+ A++N+
Sbjct: 593 LNTYQQQALLHAINCKHFEIIHGMPGTGKSTLIVLLIKILVFYNNKILLISYTHLAINNI 652
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITNP 1064
L KL +I++ +I + K+ Q + NI K D+++VVA TC +P
Sbjct: 653 LCKL--DNINYYKICKT----KQDQFKGMEPKNI------KDFYDKIEVVAGTCYSFYDP 700
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ + FD CI+DE Q L ++L P+ KFV+VGDH Q+ P+ NG+ +SL
Sbjct: 701 IYIQRSFDYCIIDEGSQINLLINLIPISRCIKFVIVGDHLQISPI--------NGVGLSL 752
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F L + + S L+ QYRM IM +SNA+ Y +++ G N IK +
Sbjct: 753 FEHLYTNY--SCSELKIQYRMGNSIMHISNAMFYKNKMISGVQ--FNGCIKFHNTEI--- 805
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGII 1244
E LN D+L Y E + I+
Sbjct: 806 ---EQLN----------DILLQY-----------------------------ENEQATIL 823
Query: 1245 TPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRI 1304
+NS ++H+ +S+ I TIDK+QG + + I++ + N C D R+
Sbjct: 824 CYFNSVIKQLQHT-RISNKNIFTIDKFQGSESNTIILLLDPITNNE--CQL----DPKRL 876
Query: 1305 NVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
NVALTRAK+KLI++G+ + + ++ + K+L+ +
Sbjct: 877 NVALTRAKQKLIIIGNKKKMVEIDIFKILLQYI 909
>gi|345567575|gb|EGX50505.1| hypothetical protein AOL_s00075g234 [Arthrobotrys oligospora ATCC
24927]
Length = 650
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 212/447 (47%), Gaps = 81/447 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ ++ LN+ Q+ A+ L A D ALI G PGTGKT T++ ++ L+ R IL+ +N
Sbjct: 197 FFDEQLNEVQKEAVSFALEATDLALIHGPPGTGKTQTLIEIIRQLVARDLKILVCGPSNI 256
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS-AMNINS----VEEIKKRLDQ---- 1050
+VDN+ KL I VRIG + + L A+ +S V +I+K +D+
Sbjct: 257 SVDNIADKLGPFRIPMVRIGHPARLLPSVISTSLDVAIKYSSGGMLVNDIRKEMDEKLNN 316
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
K+V T G + + FD
Sbjct: 317 SKKTRNGTERRKLWEDIRDLRKECKVRERRCIEDIVRASKIVLSTLHGAGGRDIIRQNFD 376
Query: 1073 VCIMDEAGQTTLPVSLGPLMFA-SKFVLVGDHYQLPPLVQSTEAREN--GMEISLFRRLS 1129
V I+DEAGQ SL PL SK +L GDH QLPP + T+ + +E+SLF RL
Sbjct: 377 VVIIDEAGQALEAQSLIPLARGPSKCILAGDHLQLPPTIPRTDKTSSLRKLELSLFERLI 436
Query: 1130 EEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ H P L QYRM + IM+ + +Y L +A+ ++ S L S P + +
Sbjct: 437 KLHGPLIKRTLSVQYRMHEMIMKYPSIGLYDSLL------LADVSVR-SHLLSDLPNVIK 489
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKD---HQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
P++F +T+ + D H++ +N +EA + ++ KDI IIT
Sbjct: 490 TDETQEPLVFWDTNPHGGFGEDDTGAHESKSNAMEA-----------EAGVQPKDIAIIT 538
Query: 1246 PYNSQANLIRHSL------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
PYN+Q L+ + + S +EI ++D +QGR+K+ IL+S VRS+E L
Sbjct: 539 PYNAQVALLSGLIKSEFPDAFSEIEIGSVDGFQGREKEAILLSLVRSNEKKE---VGFLA 595
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSK 1326
D R+NVA+TR ++ L ++G T+++
Sbjct: 596 DERRLNVAMTRPRRHLCVIGDSGTVAR 622
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 137/437 (31%), Positives = 203/437 (46%), Gaps = 60/437 (13%)
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDNLLIK 1007
+RRA T + +LI G PGTGKT T V L +G +L+ + +N AVD L K
Sbjct: 397 RRRASPTSTTPRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEK 456
Query: 1008 LKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK----------- 1052
+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 457 IHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELSSADE 515
Query: 1053 -------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
V+ TC+G +P L +F ++DE+ Q T P + P++
Sbjct: 516 KRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMVPVVL 575
Query: 1094 ASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMEL 1152
+K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM +
Sbjct: 576 GAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPALSAF 634
Query: 1153 SNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDH 1212
+ + Y L G K K D W + P +P+ F T +
Sbjct: 635 PSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIASSGT 685
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---------V 1263
LN EA + KIT +L+K + IGIITPY Q + + + S V
Sbjct: 686 SYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKLYQEV 744
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRT 1323
EI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG+ +
Sbjct: 745 EIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVGNPKA 801
Query: 1324 LSKVPLLKLLINKVGEQ 1340
LSK PL L+N EQ
Sbjct: 802 LSKQPLWNHLLNYYKEQ 818
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 325 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 381
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 382 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 441
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 442 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 487
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 488 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 547
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 548 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 606
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 607 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 666
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 667 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 719
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 720 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 775
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 776 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 832
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 833 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 873
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 346 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 402
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 403 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 462
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 463 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 508
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 509 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 568
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 569 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 627
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 628 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 687
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 688 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 740
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 741 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 796
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 797 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 853
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 854 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 894
>gi|423302630|ref|ZP_17280652.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
gi|408470506|gb|EKJ89040.1| hypothetical protein HMPREF1057_03793 [Bacteroides finegoldii
CL09T03C10]
Length = 628
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 205/455 (45%), Gaps = 87/455 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL A+D +++ G PGTGKT+T+V A+ L R +++ + +N+AVD +
Sbjct: 189 LNSTQETAVNKVLCARDVSIVHGPPGTGKTTTLVEAIYETLHREPQVMVCTQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQKHCLSAMNIN 1039
KL + + +RIG R E + K I++ M
Sbjct: 249 CEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYPELWGIRKSIREMG-GRMRRG 307
Query: 1040 SVEE---IKKRL-------------------DQVKVVAVTCLGITNPLLTDKKFDVCIMD 1077
S EE ++ R+ D +V+A T + + LL ++F +D
Sbjct: 308 SYEEREGMRSRMSRLRDRATELEIQINADLFDSARVIASTLVSSNHRLLNGRRFPTLFID 367
Query: 1078 EAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
EA Q + + VL GDH QLPP ++ EA G+E +L ++ + P ++S
Sbjct: 368 EAAQALEAACWIAIRKTDRVVLAGDHCQLPPTIKCIEAARGGLEYTLMEKVVRQKPSSVS 427
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
L+ QYRM + IM+ + Y L + + D S P+
Sbjct: 428 LLKVQYRMNEAIMQFPSDWFYQGELEAAPEVRYRG---ILDFDS-------------PMS 471
Query: 1198 FVNTDMLPAYEA----------KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPY 1247
+++T + +E K L I +I +E + E D G+I+PY
Sbjct: 472 WIDTSEMEFHEEFIGESFGRINKQEANLLLEELEAYINRIGKERILE--ERIDFGLISPY 529
Query: 1248 NSQANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+Q +R + SS + ++T+D +QG+++D + +S VR++E + L
Sbjct: 530 KAQVQYLRSKIKGSSFLRPLRSLITVNTVDGFQGQERDVVFISLVRANEEGQ---IGFLN 586
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
D R+NVA+TRA+ KL+++G TL+K P K L+
Sbjct: 587 DLRRMNVAITRARMKLVILGEAATLTKHPFYKRLM 621
>gi|423226361|ref|ZP_17212827.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
gi|392629789|gb|EIY23795.1| hypothetical protein HMPREF1062_05013 [Bacteroides cellulosilyticus
CL02T12C19]
Length = 627
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 205/455 (45%), Gaps = 82/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL ++D +++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 189 LNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEI-----------------------------QKHCLSA 1035
KL + ++ +RIG V+ ++ KH S
Sbjct: 249 CEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAMREMGGKHRGSY 308
Query: 1036 MNINSVEEIKKRL----------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
S RL D V+A T + + +L + F +DEA
Sbjct: 309 EERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVSSNHRILNGRHFGTLFIDEA 368
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q + A + VL GDH QLPP ++ EA G+E +L R+ P +S L
Sbjct: 369 AQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLECTLMERVVANKPSTVSLL 428
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFV 1199
+ QYRM + IM+ + Y L A +I+ + L+ P+ ++
Sbjct: 429 KVQYRMHEDIMKFPSQWFYNGELQ------AAPEIRYRGI----------LDWDTPINWI 472
Query: 1200 NTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQ 1250
+T + E +T N EA L+ + + + + I GK D GII+PY +Q
Sbjct: 473 DTSDMDFKEEFIGETFGRINKAEADLLLQELKAYI-DRIGGKRMLEERIDFGIISPYKAQ 531
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R+ + S + ++T+D +QG+++D I +S VR++E+ + L D
Sbjct: 532 VQYLRNKIKASGSLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDLR 588
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+ + K LI +
Sbjct: 589 RMNVAITRARMKLVILGEAETMKRHKFYKELIEYI 623
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 253/572 (44%), Gaps = 69/572 (12%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D G+ I V ++ + + R+S+
Sbjct: 326 LPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK---VPDNYGDEIAIELRSSAGAPV 382
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
+ H ++++D TSF M+ L + +++ S + ++ E + + Q
Sbjct: 383 EIPH-IFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEV---EDVVIKCQL 438
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASIL 992
P LN Q A+ VL + +LI G PGTGKT T V L +G +L
Sbjct: 439 PKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 497
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRL 1048
+ + +N AVD L K+ + VR+ E + + L N++S+ E++K L
Sbjct: 498 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQTRNMDSMPELQK-L 556
Query: 1049 DQVK------------------------------VVAVTCLGITNPLLTDKKFDVCIMDE 1078
Q+K V+ TC+G +P L +F ++DE
Sbjct: 557 QQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDE 616
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL + I
Sbjct: 617 STQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR 676
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
LQ QYRM + + + Y L G K K D W + P +P+
Sbjct: 677 -LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMF 726
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
F T + LN EA + KIT L+K + IGIITPY Q + +
Sbjct: 727 FYVTQGQEEIASSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQY 785
Query: 1258 LSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
+ S VEI ++D +QGR+KD I++S VR++E+ L D R+NVAL
Sbjct: 786 MQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVAL 842
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
TRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 843 TRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 874
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 393 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 449
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 450 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 509
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 510 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 555
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 556 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 615
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 616 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 674
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 675 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 734
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 735 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 787
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 788 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 843
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 844 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 900
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 901 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 941
>gi|393244587|gb|EJD52099.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 714
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 142/490 (28%), Positives = 210/490 (42%), Gaps = 105/490 (21%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILL 993
P + E SLN Q++A+ L A + A I G PGTGKT T+V V+ L+ R S+L+
Sbjct: 205 PMTDLQYLEASLNSSQQQAVKFALEAAEVACIHGPPGTGKTHTLVEIVRQLVARNKSVLV 264
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRL 1048
+N AVDNLL +L I RIG V + + L A + S ++KK +
Sbjct: 265 CGASNLAVDNLLERLVPHRIPLTRIGHPARVMEALHAATLDAQTVRSEQYALANDVKKDI 324
Query: 1049 D----------------------------------------------QVKVVAVTCLGIT 1062
D Q KVV TC G
Sbjct: 325 DAAMGALTGKGKGKLRGPERKKMWGEIRELRKEYRKREGTVVSSVVKQAKVVLATCHGAG 384
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARE----- 1117
L D+ FDV I+DEA Q VS P+ +K +L GD QLPP V ST ++
Sbjct: 385 GRQLYDRLFDVVIIDEATQALEAVSWVPIFKGAKLILAGDPCQLPPTVISTNQKKAKTKK 444
Query: 1118 ---------------------NG-------MEISLFRRLSEEH-PQAISALQSQYRMCQG 1148
NG +E++LF RL + P L QYRM
Sbjct: 445 TEAKPPAPAKKDNKKKGAKTGNGVLKPPRSLEVTLFDRLERMYGPSIKRMLTVQYRMHAQ 504
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR-PVIFVNTDMLPAY 1207
I + + +YG+ L D + +++ DL + E + PV+F +T +
Sbjct: 505 IAQFPSKTLYGNAL-VSHDSVKAHRLR--DLPAAQDKGDEHSDVLETPVVFFDTAGCEYF 561
Query: 1208 E---------AK--DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
E AK + + N EA ++ + LV+ + I IITPY +Q L+
Sbjct: 562 ERLEGDGQDGAKGIEEGSRCNENEAVVVKNWVERLVEGGVSPSQIAIITPYQAQVTLLSS 621
Query: 1257 SL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
L S+ +EI ++D QGR+K+ +++S VRS++ L D R+NVA+TRA++
Sbjct: 622 LLRPSMPDLEIGSVDGMQGREKEAVVLSLVRSNDKRE---VGFLKDKRRLNVAMTRARRH 678
Query: 1315 LIMVGSCRTL 1324
L +VG T+
Sbjct: 679 LCVVGDSSTI 688
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus harrisii]
Length = 1050
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 279 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 335
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 336 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 395
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 396 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 441
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 442 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 501
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 502 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 560
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 561 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 620
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 621 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 673
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 674 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 729
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 730 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 786
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 787 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 827
>gi|322701017|gb|EFY92768.1| DNA-binding protein SMUBP-2 [Metarhizium acridum CQMa 102]
Length = 724
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 148/574 (25%), Positives = 251/574 (43%), Gaps = 113/574 (19%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
+R+GD V+++ + A + G++T++ R V V+ + D
Sbjct: 160 IRTGDIVLVAEQPAGSAKKREVRDLERKGSRGVVTKVQRGFVHVAL---------DDGKD 210
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
SL VW + DE+ ++ M + +L + A+ S L R++ L +P
Sbjct: 211 EVSLPGRVWLVKLADEV--TYKRMNQTMEKLQGMVEAEYSSLMRVLFGLSSPS-PLPQDL 267
Query: 931 SQDPALSYI-WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA 989
S+D L ++ W + +LND Q+ AI L +++ ALI G PGTGKT T++ + ++ R
Sbjct: 268 SKDSQLGHLEWIDPTLNDSQKDAIRFALASREIALIHGPPGTGKTHTLIELILQMVKRKQ 327
Query: 990 SILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEI 1044
IL+ +N +VDN++ +L + +R+G + + H L + S V+++
Sbjct: 328 RILVCGPSNISVDNIVERLSPHKLPILRLGHPARLLPSVLHHSLDVLTNTSEAGAIVKDV 387
Query: 1045 KKRLDQ------------------------------------------VKVVAVTCLGIT 1062
+ +D KVV T G
Sbjct: 388 RAEMDSKQASVKKTKSGKERREIYSDLKQLRKEYRERERKCVSNLIGGSKVVLATLHGSG 447
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAREN---- 1118
L +++FDV I+DEA Q PL+ A K V GDH QLPP ++S ++ N
Sbjct: 448 GFQLRNEEFDVVIIDEASQALEAQCWVPLLSARKAVCAGDHLQLPPTIKSLNSKANPRPK 507
Query: 1119 --------GM--EISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
GM E +LF R+ H P L +QYRM + IM + +YG +L
Sbjct: 508 DESLPVITGMTLETTLFDRVLALHGPSIKRMLTTQYRMHEEIMRFPSEELYGSKL----- 562
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP--------- 1218
+A +K L +++ + P+IF++T E + +NP
Sbjct: 563 -VAADAVKARLLKDLEYGVQDNEDTSAPLIFIDTQGGDFPEQNEEDDKDNPKKGKGSLHS 621
Query: 1219 ------VEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH-SLSVSSVEIHTIDKY 1271
+EA L+ + LV + +DI I+TPYN+Q ++ +E+ ++D +
Sbjct: 622 ESKSNEMEAALVMQHAGRLVGAGVRPEDIAIVTPYNAQLGVLAPLKERFPGIELGSVDGF 681
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
QGR+K+ ++VS VRS NP + LG+ R+N
Sbjct: 682 QGREKEAVIVSLVRS--NP-DGEVGFLGEKRRLN 712
>gi|46124979|ref|XP_387043.1| hypothetical protein FG06867.1 [Gibberella zeae PH-1]
Length = 685
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 146/573 (25%), Positives = 249/573 (43%), Gaps = 110/573 (19%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR+GD V+++ + A A G++T++ R VSV+ + +
Sbjct: 88 LRTGDIVLVAEQPAGSAKKREVKDLEKKGARGVVTKVRREWVSVAI---------DEGKE 138
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
+ VW + DE+ ++ M + + +L + ++ S L R++ L +P + +
Sbjct: 139 EVAFTGRVWAVKLADEV--TYKRMNWTMEKLNKMDESEYSSLTRVLFGLSSPSPVATDLT 196
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
+ + W + +LND Q+ AI L +++ ALI G PGTGKT T++ + ++
Sbjct: 197 KDESVGNLDWFDPTLNDSQKDAIRFALASREVALIHGPPGTGKTHTLIELILQMIKLEQR 256
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
IL+ +N +VDN++ +L + +R+G + + H L + S V++I+
Sbjct: 257 ILVCGPSNISVDNVVERLAPHKVPILRLGHPARLLPSVVDHSLDVLTQTSEAGTIVKDIR 316
Query: 1046 KRLDQ------------------------------------------VKVVAVTCLGITN 1063
+D KVV T G
Sbjct: 317 SEMDTKQASIKKTKSGKERKAIYNDLKELRKEFRERERRCVSTLIGGSKVVLATLHGAGG 376
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG---- 1119
L +++FDV I+DEA Q PL+ A K V GDH QLPP ++ST +
Sbjct: 377 YQLRNEEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPPTIKSTNTKVKAPVKE 436
Query: 1120 ---------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+E++LF RL H P L +QYRM + IM + +Y +L I
Sbjct: 437 GVKITKGATLEVTLFDRLLALHGPSIKRMLTTQYRMHESIMRFPSDELYDSKL------I 490
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQT------------ 1214
A +K L +++ + PVIF++T D E D T
Sbjct: 491 AADAVKHRLLKDLEYEVEDNEDTSEPVIFIDTQGGDFPEKNEEDDKDTPKKGKASLHGDS 550
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQG 1273
+N +EA L+ + ++LV + +DI ++TPYN+Q A L +E+ ++D +QG
Sbjct: 551 KSNEMEAALVQQHVKQLVAAGVRPEDIAVVTPYNAQLAVLAPLKDKFPGIELGSVDGFQG 610
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
R+K+ ++VS VRS+ LG+ R+NV
Sbjct: 611 REKEAVIVSLVRSNSEGE---VGFLGERRRLNV 640
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 284 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 340
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 341 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 400
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 401 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 446
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 447 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 506
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 507 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 565
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 566 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 625
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 626 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 678
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 679 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 734
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 735 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 791
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 792 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 832
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 270 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 326
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 327 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 386
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 387 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 432
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 433 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 492
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 493 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 551
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 552 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 611
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 612 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 664
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 665 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 720
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 721 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 777
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 778 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 818
>gi|212693761|ref|ZP_03301889.1| hypothetical protein BACDOR_03282 [Bacteroides dorei DSM 17855]
gi|212663650|gb|EEB24224.1| hypothetical protein BACDOR_03282 [Bacteroides dorei DSM 17855]
Length = 1108
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 260/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVIL---STESDRLA---VASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L + +SD + V G I +I+ + + LR RN S DS
Sbjct: 582 FRTGDVVVLYERNHDSDNVTNKMVFKGNIEQITDTELRIR----LRATQRNVSVFPPDSR 637
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ +PRFDS S D A+
Sbjct: 638 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRSPRFDS----SFDEAI 686
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R ++K A+DY L++G PGTGKTS + + +S ILL
Sbjct: 687 A------QAGDDFERVVLKAQAARDYFLLVGPPGTGKTSRALRRMVEHFYATSSMQILLL 740
Query: 995 SYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S ID++R+G + H L + NS E+ R+
Sbjct: 741 AYTNRAVDEICQSLSSITSGIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNTRMTD 800
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 801 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 860
Query: 1101 GDHYQLPPLVQS----TEARENG--------MEISLFRR-----LSEEHPQAISALQSQY 1143
GDH QLP ++ +E + G ++ SLF R L EE P+AI L Q
Sbjct: 861 GDHKQLPAVILQNSGHSEVHDEGLRKVGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQG 920
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y RL + P E + PV F+ ++
Sbjct: 921 RMHPGVAFFPNKAFYAGRLE----------------ALGLPHQLEHIEA--PVRFIPSEQ 962
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +GIITPY SQ LIR L
Sbjct: 963 DLESISGK-----TNQYEARIVAGLAREVYLAYEEEFDPNRTLGIITPYRSQIALIRKEL 1017
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD-----WHRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1018 QTLAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1077
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G L+ + + L+ +
Sbjct: 1078 LTRARKQLFITGVPEILNHNSIYQHLLKTI 1107
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 293 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 349
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 350 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 409
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 410 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 455
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 456 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 515
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 516 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 574
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 575 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 634
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 635 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 687
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 688 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 743
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 744 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 800
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 801 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 841
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 284 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 340
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 341 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 400
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 401 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 446
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 447 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 506
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 507 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 565
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 566 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 625
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 626 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 678
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 679 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 734
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 735 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 791
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 792 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 832
>gi|300709148|ref|XP_002996741.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
gi|239606064|gb|EEQ83070.1| hypothetical protein NCER_100116 [Nosema ceranae BRL01]
Length = 618
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 70/416 (16%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+ + SLND Q+ A+++V K Y ILG PGTGKT T+V + LL +G +L+ +N
Sbjct: 221 FFDYSLNDCQKLAVLEVFYNKSYK-ILGPPGTGKTRTIVEIILQLLNKGQKVLVAGPSNV 279
Query: 1000 AVDNLLIK--LKSQSID----FVRIGRH-----------------EVVHKEIQKHCLSAM 1036
++DN++ K L I F R+G + KE +
Sbjct: 280 SIDNIIEKFLLSKYYIYHTPIFYRLGSSFKGLTKFNLENQISQMTSFIKKEKNERNFKK- 338
Query: 1037 NINSVEEIKK--RLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA 1094
++E+IKK +L+ ++ + + + L + FD I+DEA Q + + L+
Sbjct: 339 ---NIEKIKKSYKLNLIEESKIVFSTLFSALKENSSFDWVIIDEACQASDVETFLTLIKG 395
Query: 1095 SKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSN 1154
F+L+GD QL P +ST SLF +LS L QYRMC+ ++ SN
Sbjct: 396 KNFILIGDPNQLCP--KST---------SLFEKLS----LKTFLLNLQYRMCKNLICFSN 440
Query: 1155 ALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQT 1214
+ Y + I + KI+ DL + SP ++F++TD E +D +
Sbjct: 441 EMFYDNN-------IKSHKIESIDLINKSP-----------IVFIDTDCSDFNETEDEFS 482
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGR 1274
N EA +I K+ + L ++ IGIITPY+SQA L++ SL +VEI+T+D +QGR
Sbjct: 483 KKNEGEAKMICKVVKYL---KMLKLTIGIITPYSSQAILLK-SLFDENVEINTVDGFQGR 538
Query: 1275 DKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLL 1330
+KD I++S VRS+E+ L D+ R+NVA+TR+K+ L++VG+ + + L
Sbjct: 539 EKDFIILSLVRSNESG---DYGFLDDYKRLNVAITRSKRGLVVVGNSQNFKRSELF 591
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 345 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 401
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 402 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 461
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 462 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 507
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 508 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 567
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 568 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 626
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 627 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 686
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 687 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 739
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 740 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 795
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 796 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 852
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 853 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 893
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 348 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 404
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 405 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 464
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 465 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 510
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 511 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 570
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 571 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 629
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 630 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 689
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 690 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 742
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 743 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 798
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 799 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 855
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 856 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 896
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 361 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 417
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 418 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 477
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 478 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 523
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 524 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 583
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 584 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 642
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 643 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 702
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 703 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 755
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 756 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 811
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 812 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 868
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 869 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 909
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 281 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 337
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 338 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 397
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 398 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 443
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 444 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 503
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 504 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 562
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 563 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 622
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 623 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 675
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 676 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 731
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 732 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 788
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 789 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 829
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 292 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 348
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 349 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 408
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 409 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 454
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 455 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 514
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 515 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 573
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 574 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 633
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 634 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 686
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 687 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 742
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 743 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 799
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 800 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 840
>gi|218201695|gb|EEC84122.1| hypothetical protein OsI_30457 [Oryza sativa Indica Group]
Length = 981
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 156/602 (25%), Positives = 258/602 (42%), Gaps = 95/602 (15%)
Query: 823 TLRSGDYVILSTESDRLAVAS----GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLH 878
TL GD V + T +R + + G I + S++ + L R L
Sbjct: 369 TLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVT----LKSRRGDPTFSKLFG 424
Query: 879 EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRF-DSGSVFSQDPALS 937
+ RID+ + + N L L + Q + + + A F D + +
Sbjct: 425 KNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNL 484
Query: 938 YIWSEKSLNDD-------------QRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKA 983
W E +++DD Q +AI L K LI+ G PGTGKT + + +
Sbjct: 485 ADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIAC 544
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR-------------HEVVHKEIQK 1030
+ +G +L+T+ +N+AVDN++ KL +D VR+G E+V++ +QK
Sbjct: 545 AVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQK 604
Query: 1031 -----------------HCLS----AMNINSV-------------EEIKKRLDQVKVVAV 1056
HC+ A I + E I++ L VV
Sbjct: 605 FTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLS 664
Query: 1057 TCLGITNPLLTDKK-FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEA 1115
T +G +PL+ FD+ I+DEAGQ P P++ + +L GD QL P+V S EA
Sbjct: 665 TNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREA 724
Query: 1116 RENGMEISLFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI 1174
+ G+ +SL R S H + ++ L +QYRM I ++ +Y L ++
Sbjct: 725 MQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLK-------SSPS 777
Query: 1175 KVSDLSSCSPWLKEA---------LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIA 1225
VS L + P++KE L+ P +N D + + N EA +++
Sbjct: 778 VVSHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVS 837
Query: 1226 KITQELVKNEIEGKDIGIITPYNSQANLIRHSL----SVSSVEIHTIDKYQGRDKDCILV 1281
+ LV+ + I + +PY +Q L+R L S VE+ TID +QGR+ D +++
Sbjct: 838 QHVLNLVQCGVSPTAIAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVI 897
Query: 1282 SFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
S VRS+ LGD R+NVA+TRA++ + +V T+ L L+ + +
Sbjct: 898 SMVRSNTLG---AVGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRHIRQHG 954
Query: 1342 GI 1343
+
Sbjct: 955 QV 956
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 282 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 338
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 339 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 398
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 399 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 444
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 445 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 504
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 505 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 563
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 564 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 623
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 624 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 676
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 677 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 732
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 733 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 789
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 790 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 830
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 351 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 407
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 408 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 467
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 468 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 513
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 514 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 573
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 574 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 632
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 633 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 692
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 693 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 745
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 746 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 801
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 802 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 858
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 859 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 899
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 895
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 895
>gi|323345000|ref|ZP_08085224.1| DNA helicase [Prevotella oralis ATCC 33269]
gi|323094270|gb|EFZ36847.1| DNA helicase [Prevotella oralis ATCC 33269]
Length = 1174
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 155/555 (27%), Positives = 259/555 (46%), Gaps = 82/555 (14%)
Query: 824 LRSGDYVIL-------STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL 876
R+GD VIL ++ + V IT+I + +RL R+ +D +
Sbjct: 603 FRTGDIVILYPYPIHSEPDARQTMVFRATITDIQ--------TNCIRLALRHPQTDKRAF 654
Query: 877 LH---EVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
L + W ++ D +SF + Y + FL ++Q+ + +I+ AP+ QD
Sbjct: 655 LRPQTDRWTVEHDFFESSFGAL-YRGLHTFLSASQAR--KDLILAQRAPQ--------QD 703
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV--KALLMRGASI 991
L+ + N+ +++ A+D+ LI+G PGTGKTS + V + LL ++I
Sbjct: 704 THLALQGDYGAFNE----LVLRAKQARDFFLIIGPPGTGKTSFGLLNVLKEELLSPSSAI 759
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS--AMNINSVEEIKKRLD 1049
LLT+YTN AVD + KL IDF+RIG + + H L ++V ++K+ +
Sbjct: 760 LLTAYTNRAVDEICSKLCEAGIDFLRIGSSLNCEERYRGHLLEERVQQCDTVSDVKELIA 819
Query: 1050 QVKVVAVT--CLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFA-------SKFVLV 1100
+ +VV T L LLT K+FD+ ++DEA Q P +G L +FV++
Sbjct: 820 RTRVVCATTSALNANIALLTMKRFDLAVIDEASQILEPHIIGLLCAQCGGKESIGRFVMI 879
Query: 1101 GDHYQLPPLVQST--EARENGME----------ISLFRRLSEEH---PQAISALQSQYRM 1145
GDH QLP +VQ T E+R + E +SLF RL + + + L Q RM
Sbjct: 880 GDHKQLPAVVQQTTEESRTDEPELHAIHLTDCRLSLFERLLKTYRNNASVVYMLTRQGRM 939
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP 1205
+ I + YG+ L + + + + ++ + + + EAL R + F+N +
Sbjct: 940 HRDIARFPSQAFYGNALQ--TVPLPHQERVLAPVLQGAKGI-EALLLTRRIAFLNAPAME 996
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVK----NEIEGKDIGIITPYNSQANLIRHSLS-- 1259
A +T N EA +IA T + N IGII PY +Q +R+++
Sbjct: 997 DESAVSDKT--NKAEAEMIAATTVAAYRLHAHNFSVAHTIGIIVPYRNQIATVRNAIDRY 1054
Query: 1260 ----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN--CTSSLLGDW----HRINVALT 1309
+ + I T+++YQG +D I+ F S + C + D ++NVA+T
Sbjct: 1055 GIKCLHDITIDTVERYQGSQRDIIIYGFTVSKRYQLDFLCNNVFEEDGAVIDRKLNVAMT 1114
Query: 1310 RAKKKLIMVGSCRTL 1324
RA++ LI++G+ L
Sbjct: 1115 RAREHLILIGNALLL 1129
>gi|45657684|ref|YP_001770.1| hypothetical protein LIC11819 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421086300|ref|ZP_15547151.1| AAA domain protein [Leptospira santarosai str. HAI1594]
gi|421102415|ref|ZP_15563019.1| AAA domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600924|gb|AAS70407.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410367529|gb|EKP22913.1| AAA domain protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410431865|gb|EKP76225.1| AAA domain protein [Leptospira santarosai str. HAI1594]
Length = 634
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 209/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISARGILVLRLGHPARINEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P P++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWIPILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
E E + L +QYRM I + Y L G E K + S+ P+L
Sbjct: 423 VENLELYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPFL 478
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 479 N-------AFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV + RA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMARARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 344 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 400
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 401 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 460
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 461 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 506
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 507 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 566
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 567 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 625
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 626 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 685
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 686 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 738
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 739 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 794
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 795 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 851
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 852 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 892
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 164/572 (28%), Positives = 253/572 (44%), Gaps = 69/572 (12%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 320 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 376
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
+ H +++D TSF M+ L + +++ S + ++ E + ++ Q
Sbjct: 377 EIPHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEV---EDVTIKCQL 432
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASIL 992
P LN Q A+ VL + +LI G PGTGKT T V L +G +L
Sbjct: 433 PKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVL 491
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRL 1048
+ + +N AVD L K+ + VR+ E + + L N++S+ E++K L
Sbjct: 492 VCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQISNMDSMPELQK-L 550
Query: 1049 DQVK------------------------------VVAVTCLGITNPLLTDKKFDVCIMDE 1078
Q+K V+ TC+G +P L +F ++DE
Sbjct: 551 QQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDE 610
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL + I
Sbjct: 611 STQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR 670
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
LQ QYRM + + + Y L G K K D W + P +P+
Sbjct: 671 -LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIK-KGFDFQ----WPQ----PDKPMF 720
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
F T + LN EA + KIT L+K + IGIITPY Q + +
Sbjct: 721 FYVTQGQEEIASSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQY 779
Query: 1258 LSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
+ S VEI ++D +QGR+KD I++S VR++E+ L D R+NVAL
Sbjct: 780 MQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVAL 836
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
TRAK +I+VG+ + LSK PL L+N EQ
Sbjct: 837 TRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQ 868
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 895
>gi|393786855|ref|ZP_10374987.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii CL02T12C05]
gi|392658090|gb|EIY51720.1| hypothetical protein HMPREF1068_01267 [Bacteroides nordii CL02T12C05]
Length = 634
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/459 (26%), Positives = 215/459 (46%), Gaps = 81/459 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL KD A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 192 LNSTQEEAVNKVLCTKDVAIVHGPPGTGKTTTLVEAIYETLHRENQVLVCAQSNTAVDWI 251
Query: 1005 LIKLKSQSIDFVRIG----------------RHEV---------VHKEIQK--------- 1030
KL + + +RIG R E + K I++
Sbjct: 252 SEKLVDRGVPVLRIGNPTRVNDKMLSFTYERRFESHPAYTELWGIRKSIREMSGRIRKGS 311
Query: 1031 HCLSAMNINSVEEIKKRLDQV------------KVVAVTCLGITNPLLTDKKFDVCIMDE 1078
H N + ++ R ++ +VVA T + + +L ++F +DE
Sbjct: 312 HIERENMRNHISHLRDRATELEILINEALFSSTRVVASTLVSSNHRILNGRRFSTLFIDE 371
Query: 1079 AGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA 1138
A Q + + + GDH QLPP ++ EA G+ +L +++ P ++S
Sbjct: 372 AAQALEAACWIAIRKTDRVIFAGDHCQLPPTIKCIEAARGGLNHTLMEKVATNKPSSVSL 431
Query: 1139 LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
L+ QYRM + IM + Y ++L + EI I L+ P+I+
Sbjct: 432 LKVQYRMNESIMRFPSEWFYNNQLE-SAPEIRQRGI---------------LDFDTPMIW 475
Query: 1199 VNTDMLPAYE---AKDHQTLNNPVEACLIAKI---TQELVKNEI--EGKDIGIITPYNSQ 1250
++T + +E + +N P L+ ++ Q++ +N + E D G+I+PY +Q
Sbjct: 476 IDTSEMECHEEFVGESFGRINKPEANLLLQELESYIQKIGENRVLDEQIDFGLISPYKAQ 535
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R+ + SS + ++T+D +QG+++D I +S VR++E+ + L D
Sbjct: 536 VQYLRNKIKSSSFFRRFRPLITVNTVDGFQGQERDVIFISLVRANESGQ---IGFLNDLR 592
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NVA+TRA+ KL+++G+ TL K L+ + +++
Sbjct: 593 RMNVAITRARMKLVILGNAATLIKHTFYHKLMEYIQKET 631
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 308 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 364
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 365 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 424
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 425 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 470
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 471 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 530
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 531 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 589
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 590 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 649
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 650 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 702
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 703 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 758
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 759 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 815
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 816 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 856
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 351 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 407
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 408 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 467
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 468 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 513
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 514 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 573
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 574 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 632
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 633 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 692
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 693 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 745
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 746 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 801
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 802 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 858
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 859 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 899
>gi|423242085|ref|ZP_17223195.1| hypothetical protein HMPREF1065_03818 [Bacteroides dorei CL03T12C01]
gi|392639829|gb|EIY33637.1| hypothetical protein HMPREF1065_03818 [Bacteroides dorei CL03T12C01]
Length = 1108
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 170/570 (29%), Positives = 259/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVIL---STESDRLA---VASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L + +SD + V G I +I+ + + LR RN S DS
Sbjct: 582 FRTGDVVVLYERNHDSDNVTNKMVFKGNIEQITDTELRIR----LRATQRNVSVFPPDSR 637
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ +PRFDS S D A+
Sbjct: 638 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRSPRFDS----SFDEAI 686
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K A+DY L++G PGTGKTS + + +S ILL
Sbjct: 687 A------QAGDDFERVALKAQAARDYFLLVGPPGTGKTSRALRRMVEHFYATSSMQILLL 740
Query: 995 SYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S ID++R+G + H L + NS E+ R+
Sbjct: 741 AYTNRAVDEICQSLSSITSGIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNTRMTD 800
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 801 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 860
Query: 1101 GDHYQLPPLVQS----TEARENG--------MEISLFRR-----LSEEHPQAISALQSQY 1143
GDH QLP ++ +E + G ++ SLF R L EE P+AI L Q
Sbjct: 861 GDHKQLPAVILQNSGHSEVHDEGLRKVGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQG 920
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y RL P E + PV F+ ++
Sbjct: 921 RMHPGVAFFPNKAFYAGRLEALG----------------LPHQLEHIEA--PVRFIPSEQ 962
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +GIITPY SQ LIR L
Sbjct: 963 DLESISGK-----TNQYEARIVADLAREVYLAYEEEFDPNRTLGIITPYRSQIALIRKEL 1017
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD-----WHRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1018 QTLAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1077
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G L++ + + L+ +
Sbjct: 1078 LTRARKQLFITGVPEILNRNSIYQHLLKTI 1107
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 251/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 326 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 382
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 383 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 442
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 443 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 488
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N+
Sbjct: 489 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNME 548
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 549 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 607
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 608 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 667
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 668 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 720
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 721 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 776
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 777 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 833
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 834 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 874
>gi|224536127|ref|ZP_03676666.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus DSM
14838]
gi|224522261|gb|EEF91366.1| hypothetical protein BACCELL_00992 [Bacteroides cellulosilyticus DSM
14838]
Length = 627
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 206/455 (45%), Gaps = 82/455 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL ++D +++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 189 LNSTQENAVNKVLNSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIGRHEVVH----------------------------KEIQ-KHCLSA 1035
KL + ++ +RIG V+ +EI KH S
Sbjct: 249 CEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAMREIGGKHRGSY 308
Query: 1036 MNINSVEEIKKRL----------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
S RL D V+A T + + +L + F +DEA
Sbjct: 309 EERESARNRMSRLRDRATQLEIQINADLFDNAHVIASTLVSSNHRILNGRHFGTLFIDEA 368
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q + A + VL GDH QLPP ++ EA G+E +L R+ P +S L
Sbjct: 369 AQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLECTLMERVVANKPSTVSLL 428
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFV 1199
+ QYRM + IM+ + Y L A +I+ + L+ P+ ++
Sbjct: 429 KVQYRMHEDIMKFPSQWFYNGELQ------AAPEIRYRGI----------LDWDTPINWI 472
Query: 1200 NTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQ 1250
+T + E +T N EA L+ + + + + I GK D GII+PY +Q
Sbjct: 473 DTSDMDFKEEFIGETFGRINKAEADLLLQELKVYI-DRIGGKRVLEERIDFGIISPYKAQ 531
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R+ + S + ++T+D +QG+++D I +S VR++E+ + L D
Sbjct: 532 VQYLRNKIKASGSLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEDGQ---IGFLNDLR 588
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R+NVA+TRA+ KL+++G T+ + K LI +
Sbjct: 589 RMNVAITRARMKLVILGEAETMKRHKFYKELIEYI 623
>gi|83816360|ref|YP_444497.1| DNA helicase [Salinibacter ruber DSM 13855]
gi|83757754|gb|ABC45867.1| putative DNA helicase [Salinibacter ruber DSM 13855]
Length = 707
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 160/314 (50%), Gaps = 19/314 (6%)
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVG 1101
E I + L VV T + LL FD ++DEA Q T P P+ A + VLVG
Sbjct: 395 EAIDEVLGAADVVCSTNSTAGSDLLDGHTFDTLVIDEATQATAPSCWIPMTHARRAVLVG 454
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISA-------LQSQYRMCQGIMELSN 1154
DH QLPP +Q+ EA G+ +LF RL+ H A A L+ QYRM + IM N
Sbjct: 455 DHKQLPPTIQNQEAARRGLRHTLFERLAHHHETAPEAPGSIRSLLRRQYRMHETIMGFPN 514
Query: 1155 ALIYGDRLSCGSDEIAN----AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDML--PAYE 1208
Y RL D+ A A + V + + + + L+P ++FV+T + P ++
Sbjct: 515 RTFYDGRLEA--DDTARHRTLADLGVPEHALPADERRAILDPEASLVFVDTSGIDAPEHQ 572
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTI 1268
+ NP EA LIA++T L++ + I +I+PY+ Q + I +L+ E T+
Sbjct: 573 RSGSHSRENPREADLIAQLTTALLEAGVAPSAIAVISPYDDQVDRIDRALAPDGPETDTV 632
Query: 1269 DKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVP 1328
D +QGR+K+ +L+S V S N R L + R NVA+TRA++K ++VG T++
Sbjct: 633 DGFQGREKEIVLLSLVHS--NDRGAI-GFLDEPRRFNVAVTRAERKAVVVGDASTVAAAD 689
Query: 1329 LLKLLINKVGEQSG 1342
+L + + E +G
Sbjct: 690 VLGAFV-RYAETTG 702
Score = 91.3 bits (225), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 10/218 (4%)
Query: 821 DCTLRSGDYVILS-TESDRLAVASGLITEISRFHVSVSFS-KPLR-LPGRNSSSDADSLL 877
D +R GD V++S T+ R +G +T+++ + ++ SF KP + G+ D +
Sbjct: 97 DHEIRVGDLVMISKTDPLRDDNPTGTVTQVTNYSITASFDPKPDGWVFGKGLRPDRREEV 156
Query: 878 HEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALS 937
R+D + M+ L +L QLR + + +P + +PA
Sbjct: 157 VSGLRVDLYVNDIPYQRMQDALAKLPTADGALKQLRDVSTGVASP-------AATEPAPI 209
Query: 938 YIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYT 997
W +LND QRRA+ K + D LI G PGTGKT+T ++ + RG S+L T+ +
Sbjct: 210 DDWHNSALNDAQRRAVRKAVATDDVHLIHGPPGTGKTTTATEVLQQCVDRGESVLATAAS 269
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA 1035
N+AVDN++ L Q D VR+G V+ ++ H L A
Sbjct: 270 NTAVDNVVAFLAEQGTDVVRLGHPARVNDRLRTHTLDA 307
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 164/588 (27%), Positives = 255/588 (43%), Gaps = 101/588 (17%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 536 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 592
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 593 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 652
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 653 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 698
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHC 1032
+G +L+ + +N AVD L K+ + VR+ R + +H +I+
Sbjct: 699 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSRKAIDSPVSFLALHNQIR--- 755
Query: 1033 LSAMNINSVEEIKKRLDQVK------------------------------VVAVTCLGIT 1062
N++S+ E++K L Q+K V+ TC+G
Sbjct: 756 ----NMDSMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAG 810
Query: 1063 NPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGME 1121
+P L +F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+
Sbjct: 811 DPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLS 870
Query: 1122 ISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
SLF RL + I LQ QYRM + + + Y L G K K D
Sbjct: 871 QSLFERLVVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ- 927
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
W + P +P+ F T + LN EA + KIT +L+K + I
Sbjct: 928 ---WPQ----PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQI 979
Query: 1242 GIITPYNSQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
GIITPY Q + + + S VEI ++D +QGR+KD I++S VR++E+
Sbjct: 980 GIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ-- 1037
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 1038 -GIGFLNDPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 1084
>gi|189208013|ref|XP_001940340.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187976433|gb|EDU43059.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 715
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 215/477 (45%), Gaps = 99/477 (20%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W++ SLND Q+ AI L +++ ALI G PGTGKT T++ + LL + +L+ +N
Sbjct: 196 WNDPSLNDSQQEAIRFALASREVALIHGPPGTGKTHTLIELILQLLKQKLRLLVCGPSNI 255
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L S + VR+G + + H L + S V++++K +D
Sbjct: 256 SVDNIVERLASHKVPMVRLGHPARLLPSVLNHSLDVLTRTSEAAALVQDVRKEMDDKQSS 315
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L ++FD
Sbjct: 316 IRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVSGSKVVLATLHGAGGFHLKGQEFD 375
Query: 1073 VCIMDEAGQTTLPVSLGPLMF--ASKFVLVGDHYQLPPLVQSTEARENG----------- 1119
V I+DEA Q PL++ ASK VL GDH QLPP ++S ++E+
Sbjct: 376 VVIIDEASQALEAQCWVPLLWVKASKLVLAGDHLQLPPTIKSLNSKESKAAKKDAKKSTD 435
Query: 1120 -------------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCG 1165
+E +LF RL H P L +QYRM + IM + +Y +L
Sbjct: 436 KTGDAEKPAINTTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYDSKL--- 492
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYE-----AKDHQTLN- 1216
IA +K L +++ + P++F +T D E K + +N
Sbjct: 493 ---IAAEFVKERLLKDLPYEVEDTEDTREPLVFWDTQGGDFPEKIEDEGVIGKGGKGMNL 549
Query: 1217 -----NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTID 1269
N EA L+ L+ ++ +DI ++TPYN+Q L+ L + +E+ ++D
Sbjct: 550 GDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYNAQLALLGGMLKEAYPGIELGSVD 609
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L ++G T+SK
Sbjct: 610 GFQGREKEAVIVSTVRSNSEHE---VGFLGEKRRLNVAMTRPKRHLCVIGDSDTISK 663
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 251/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVITKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 895
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 250/581 (43%), Gaps = 89/581 (15%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 290 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 346
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 347 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 406
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 407 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 452
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 453 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 512
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 513 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 571
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 572 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 631
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
LQ QYRM + + + Y L G K K D W +
Sbjct: 632 VV---LPWGCLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 682
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 683 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 738
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 739 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 795
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 796 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 836
>gi|308807118|ref|XP_003080870.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
gi|116059331|emb|CAL55038.1| RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
ref|XP_323582.1| h (ISS) [Ostreococcus tauri]
Length = 1084
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 128/415 (30%), Positives = 191/415 (46%), Gaps = 77/415 (18%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDN 1003
+N Q A++ L + LI G PGTGKT T V V+ L G S IL TS +N AVDN
Sbjct: 593 MNQSQIDALMAALFNR-ITLIQGPPGTGKTHTAVALVQMWLRCGTSPILCTSDSNIAVDN 651
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM----------NINSVEEIKKRLDQVKV 1053
L+ L + RIGR E V +++ + + ++ + + I L + +V
Sbjct: 652 LVDGLARAGVRVARIGRPEAVRQDLMPYMIESIAGIDQDCRWSKSDQFQAINNALRKAEV 711
Query: 1054 VAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQS 1112
+ TC G + +L F C++DEA Q T P ++ PL K VL+GD QLPP + S
Sbjct: 712 ICATCAGAGSDILERFSFQACLIDEATQATEPATIIPLTKGCKQVVLIGDQNQLPPTIIS 771
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
EA G+ SLF RL + L+ QYRM I + Y ++SC +
Sbjct: 772 REAEAAGLGESLFERLIRSGIRTY-MLKVQYRMHPAIALFPSQTFY--KVSCYRVHRRVS 828
Query: 1173 KIKVSDLSSC---SPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQ 1229
++ S L+ SPW + +H+ +
Sbjct: 829 VVRQSVLTGPFPQSPWPR----------------------GEHR---------------E 851
Query: 1230 ELVKN-EIEGKDIGIITPYNSQANLIRHSL-----------------SVSSVEIHTIDKY 1271
EL E+ DIG++TPY++QA I+ L S+ +VE+ T+D +
Sbjct: 852 ELAGGHEVLPGDIGVVTPYSAQARAIKKILRGNAPERTRFDAPADPTSMKAVEVATVDGF 911
Query: 1272 QGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
QGR+K+ I+ S R++ N L D R+NV LTRAK+ LI+VG +TL +
Sbjct: 912 QGREKEVIIFSCTRAN---MNGNVGFLADTRRVNVMLTRAKRGLIIVGHMKTLQQ 963
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 165/573 (28%), Positives = 254/573 (44%), Gaps = 71/573 (12%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R S
Sbjct: 328 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRTSVGAPV 384
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
+ H +++D TSF M+ L + +++ S + ++ E + ++ Q
Sbjct: 385 EIPHN-YQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEV---EDVTIKCQL 440
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASIL 992
P LN Q A+ VL + +LI G PGTGKT T V L +G +L
Sbjct: 441 PKRFTANGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVL 499
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRL 1048
+ + +N AVD L K+ + VR+ E + + L N++S+ E++K L
Sbjct: 500 VCAPSNIAVDQLTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQISNMDSMPELQK-L 558
Query: 1049 DQVK------------------------------VVAVTCLGITNPLLTDKKFDVCIMDE 1078
Q+K V+ TC+G +P L +F ++DE
Sbjct: 559 QQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDE 618
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL + I
Sbjct: 619 STQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR 678
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVS-DLSSCSPWLKEALNPCRPV 1196
LQ QYRM + + + Y L G A +IK D W + P +P+
Sbjct: 679 -LQVQYRMHPALSAFPSNIFYEGSLQNGV--TAGDRIKKGFDFQ----WPQ----PEKPM 727
Query: 1197 IFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRH 1256
F T + LN EA + KIT L+K + IGIITPY Q + +
Sbjct: 728 FFYVTQGQEEIASSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQ 786
Query: 1257 SLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVA 1307
+ S VEI ++D +QGR+KD I++S VR++E+ L D R+NVA
Sbjct: 787 YMQFSGSLHTKLYQQVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVA 843
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
LTRAK +I+VG+ + LSK PL L+N EQ
Sbjct: 844 LTRAKYGVIIVGNPKALSKQPLWNNLLNNYKEQ 876
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 251/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D G+ I V ++ + + R+S+
Sbjct: 324 LPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK---VPDNYGDEIAIELRSSAGAPV 380
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 381 EIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 440
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 441 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 486
Query: 985 LMRGAS-ILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G+ +L+ + +N AVD L K+ + VR+ E + + L N+
Sbjct: 487 ARQGSGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQTRNME 546
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 547 SMPELQK-LQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGDPRLAKM 605
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 606 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 665
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 666 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 718
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT L+K + IGIITPY
Sbjct: 719 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYE 774
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 775 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 831
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 832 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 872
>gi|145349529|ref|XP_001419184.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579415|gb|ABO97477.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 479
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 120/392 (30%), Positives = 184/392 (46%), Gaps = 49/392 (12%)
Query: 984 LLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEE 1043
L R + IL TS +N AVDNL+ L + RIGR E V +++ + + +I +++
Sbjct: 3 LRCRTSPILCTSDSNIAVDNLVDGLARAGVRVARIGRPEAVRQDLMPYMIE--SIAGIDQ 60
Query: 1044 ------------IKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
I L Q +V+ TC G + +L F C++DEA Q T P ++ PL
Sbjct: 61 DCRWSKQQQRSAITNALRQAEVICATCAGAGSDILEKYSFQACLIDEATQATEPATVIPL 120
Query: 1092 MFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
K VL+GD QLPP + S EA G+ SLF R + L+ QYRM I
Sbjct: 121 TKGCKQVVLIGDQNQLPPTIISREAEAAGLGESLFERFIRAGIRTY-MLKVQYRMHPAIA 179
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
+ Y L G+ +P + P P+ FVN + E
Sbjct: 180 LFPSKTFYKGELLSGTPPSQRR----------APVGFDWPVPAVPMAFVNVE--EGAERS 227
Query: 1211 DHQTLNNPVEACLIAKITQELV-KNEIEGKDIGIITPYNSQANLIRHSL----------- 1258
D + NP E + I ++L ++E+ DIG++TPY++QA I+ L
Sbjct: 228 DGSSQTNPAEIQRVVNIVKKLAGQHEVLPGDIGVVTPYSAQARAIKKILRGNAPERTRFD 287
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
S+ +VE+ T+D +QGR+K+ I+ S R++ N L D R+NV LTRAK
Sbjct: 288 APADPTSMKAVEVATVDGFQGREKEVIVFSCTRAN---MNGNVGFLADTRRVNVMLTRAK 344
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
+ LI+VG +TL + ++ K +SG++
Sbjct: 345 RGLIIVGHMKTLQQDEIVWKGWLKWARESGLI 376
>gi|265754961|ref|ZP_06089875.1| DNA helicase [Bacteroides sp. 3_1_33FAA]
gi|263234572|gb|EEZ20151.1| DNA helicase [Bacteroides sp. 3_1_33FAA]
Length = 1108
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 259/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVIL---STESDRLA---VASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L + +SD + V G I +I+ + + LR RN S DS
Sbjct: 582 FRTGDVVVLYERNHDSDNVTNKMVFKGNIEQITDTELRIR----LRATQRNVSVFPPDSR 637
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ +PRFDS S D A+
Sbjct: 638 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRSPRFDS----SFDEAI 686
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K A+DY L++G PGTGKTS + + +S ILL
Sbjct: 687 A------QAGDDFERVALKAQAARDYFLLVGPPGTGKTSRALRRMVEHFYATSSMQILLL 740
Query: 995 SYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S ID++R+G + H L + NS E+ R+
Sbjct: 741 AYTNRAVDEICQSLSSITSGIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNTRMTD 800
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 801 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 860
Query: 1101 GDHYQLPPLVQS----TEARENGM-EISLFR------------RLSEEHPQAISALQSQY 1143
GDH QLP ++ +E + G+ ++ LF RL EE P+AI L Q
Sbjct: 861 GDHKQLPAVILQNSGHSEVHDEGLRKVGLFNLKDSLFERLYRFRLKEESPKAIDMLCRQG 920
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y RL + P E + PV F+ ++
Sbjct: 921 RMHPGVAFFPNKAFYAGRLE----------------ALGLPHQLEHIEA--PVRFIPSEQ 962
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +GIITPY SQ LIR L
Sbjct: 963 DLESISGK-----TNQYEARIVAGLAREVYLAYEEEFDPNRTLGIITPYRSQIALIRKEL 1017
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD-----WHRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1018 QTLAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1077
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G L+ + + L+ +
Sbjct: 1078 LTRARKQLFITGVPEILNHNSIYQHLLKTI 1107
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 895
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 251/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L D + G+ I V ++ + + R+S
Sbjct: 325 LPKTDSDMRLMQGDEICLRYXGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 381
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 382 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 441
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 442 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 487
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 488 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 547
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 548 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 606
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 607 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 666
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 667 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 719
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 720 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 775
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 776 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 832
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 833 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 873
>gi|221636102|ref|YP_002523978.1| hypothetical protein trd_A0696 [Thermomicrobium roseum DSM 5159]
gi|221157417|gb|ACM06535.1| hypothetical protein trd_A0696 [Thermomicrobium roseum DSM 5159]
Length = 1149
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 157/612 (25%), Positives = 259/612 (42%), Gaps = 123/612 (20%)
Query: 816 PTKDMDCTLRSGDYVILSTE-----------SDRLAVASGLITEISRFHVSVSFSKPLRL 864
P + +D +R D V+++ + L G + + + ++V R+
Sbjct: 511 PGRRLDTRIREDDTVLITPQWPDGLRERIPRPGELFSVEGTVVALGEYEITVELRD--RV 568
Query: 865 PGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRY---NLVQLFLQSAQSSQLRRMIVDL-E 920
P D ++RID+ +T + + + L F+ S ++ R +D E
Sbjct: 569 PLTPDGHDP------LYRIDQ---LTGWDMRAWQLEGLADFFVSSMTAASARGREIDWRE 619
Query: 921 APRFDSGSVFSQDPALSYI------WSEKSLNDDQRRAIIKVLTAK--DYALILGMPGTG 972
P + + P+L W LN QRRA+ L + D L+ G PGTG
Sbjct: 620 LPALTQTVLGLRPPSLPQTASTLPGWLAGGLNQSQRRALAAALALQPGDLLLVQGPPGTG 679
Query: 973 KTSTMVHAVKALLMRG----------ASILLTSYTNSAVDNLLIKLKSQSID----FVRI 1018
KT+ + V+ LL R +L+ + T+ A + ++ K++ + VR+
Sbjct: 680 KTALIAAIVRGLLARALLDPARPAGRRPVLVLTNTHRAANEVVRKVRQDVPEVLPFLVRV 739
Query: 1019 G-RHEVVHKEIQKHCLSAMN-----------------INSVEEIKKRLDQVK---VVAVT 1057
G E + +E+ L A + I + +R ++ V V
Sbjct: 740 GSEREDMEEEVAAQTLVARSGLSARVRRQPPDNDEAAIQRLLASSRRARTIREHAAVFVA 799
Query: 1058 CLGITNPL-LTDKKFDVCIMDEAGQTTLPVSLG-----PLMFASKFVLVGDHYQLPPLVQ 1111
LG + L F+ I+DEAGQ T P L P +A + +LVGD QLPP+V
Sbjct: 800 TLGAADAAELRGLTFETVIVDEAGQATEPAFLQALRRLPFGYAGRLILVGDENQLPPVVT 859
Query: 1112 STEARE-------------NGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
++E+ + + S F RL +P A L QYRM I +L + + Y
Sbjct: 860 TSESPATWPDVERLGIQPGDSLRTSAFERLHRRYPAACIRLTEQYRMNDPICDLVSHVFY 919
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--------PVIFVNTDMLP----- 1205
D L IA+ ++ + WL E P PV++++T P
Sbjct: 920 QDELRPADRRIADRRL--------AHWLDELGVPIPSGIIGQSPPVVYLDTSDDPLARDS 971
Query: 1206 -AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK------DIGIITPYNSQANLIRHSL 1258
A + D + N EA LIA + E +++ E IG+I+PY Q LIR L
Sbjct: 972 GAVFSADDEGRTNQREAELIAAVLAEFLRDLPESAHQTIIDQIGVISPYRRQNTLIRQEL 1031
Query: 1259 S-----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
+ ++ + + T+D++QG +++ I+VS V S NP SL +W R+NVAL+RA+
Sbjct: 1032 ARAHPALARLRVDTVDRFQGGEREIIIVSLVNS--NPAGEIGSLHAEWRRLNVALSRARS 1089
Query: 1314 KLIMVGSCRTLS 1325
L+ VG RT +
Sbjct: 1090 LLVFVGDRRTFT 1101
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/441 (31%), Positives = 204/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 453 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLSRQGNGPVLVCAPSNIAVDQ 511
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 512 LTEKIDKTGLKVVRLCAKSREAIESPVSFLALHNQISNMDSMPELQK-LQQLKDETGELS 570
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 571 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 630
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 631 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 689
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 690 LSAFPSNIFYEGSLQNGVTAADRIK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 740
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT L+K + IGIITPY Q + + + S
Sbjct: 741 SSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 799
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRAK +I+VG
Sbjct: 800 YQQVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRAKYGVIIVG 856
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 857 NPKALSKQPLWNNLLNNYKEQ 877
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 158 bits (399), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 253/572 (44%), Gaps = 69/572 (12%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 305 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 361
Query: 875 SLLHEVWRIDKDEIMTSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQD 933
+ H +++D TSF M+ L + +++ S + ++ E + + Q
Sbjct: 362 EVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEG---EDVIIKCQL 417
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASIL 992
P LN Q A+ VL + +LI G PGTGKT T V L +G +L
Sbjct: 418 PKRFTAQGLPDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVL 476
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRL 1048
+ + +N AVD L K+ + VR+ E + + L N++S+ E++K L
Sbjct: 477 VCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-L 535
Query: 1049 DQVK------------------------------VVAVTCLGITNPLLTDKKFDVCIMDE 1078
Q+K V+ TC+G +P L +F ++DE
Sbjct: 536 QQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDE 595
Query: 1079 AGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAIS 1137
+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL + I
Sbjct: 596 STQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR 655
Query: 1138 ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVI 1197
LQ QYRM + + + Y L G K K D W + P +P+
Sbjct: 656 -LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMF 705
Query: 1198 FVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHS 1257
F T + LN EA + KIT +L+K + IGIITPY Q + +
Sbjct: 706 FYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQY 764
Query: 1258 LSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVAL 1308
+ S VEI ++D +QGR+KD I++S VR++E+ L D R+NVAL
Sbjct: 765 MQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVAL 821
Query: 1309 TRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
TRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 822 TRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 853
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 205/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 504 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 562
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 563 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 621
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 622 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 681
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 682 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 740
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 741 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 791
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 792 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 850
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 851 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 907
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 908 NPKALSKQPLWNHLLNYYKEQ 928
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 136/441 (30%), Positives = 213/441 (48%), Gaps = 68/441 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKT--STMV--HAVKALLMRGASILLTSYTNSA 1000
LN+ Q A +KVL + +LI G PGTGKT S+ + H VK + + +L+ + +N A
Sbjct: 518 LNNSQISAAMKVLKSP-LSLIQGPPGTGKTVVSSFIVHHIVKHAIKKNEKVLVCAPSNVA 576
Query: 1001 VDNLLIKLKSQSIDFVRIG---RHEVV---------HKEIQKHCLSAMNINSVEEIK--- 1045
+D L KL S + VR+ R EV H+ Q + +++K
Sbjct: 577 IDQLTGKLHSIGLKVVRLCSKLREEVASPVEHLTLHHQVWQLDSHGRGELAKFKQLKDEQ 636
Query: 1046 --------------------KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLP 1085
K L + V+A TC+G +P L+ KF ++DE+ Q + P
Sbjct: 637 GELSTNDDHRYFALKRHAESKILKEADVIATTCVGAGDPRLSKLKFPYVLIDESTQASEP 696
Query: 1086 VSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE--EHPQAISALQSQ 1142
L PLM +K VLVGDH QL P++ + + E G+ SLF RL HP L +Q
Sbjct: 697 ECLIPLMLGAKQVVLVGDHCQLGPVLLAKKVIEAGLSQSLFERLINLGHHP---FRLTTQ 753
Query: 1143 YRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTD 1202
YRM + E ++ Y +L +E++ +D+ PW +P P+ F N+
Sbjct: 754 YRMHPSLSEFPSSTFYEGQL---VNELSYKDRVYNDIK--FPW----PSPNNPMFFYNST 804
Query: 1203 MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS 1262
+ +N +EA KI +L++ + IGIITPY Q + + +++ +
Sbjct: 805 GAEEISSSGTSFINR-MEASTTEKIVTKLLELGTKPHQIGIITPYEGQRSFLVNNMQKTG 863
Query: 1263 ---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKK 1313
+E+ ++D +QGR+KD I++S VRS++N L D R+NVALTRA+
Sbjct: 864 KLSIELYREIEVASVDSFQGREKDFIILSCVRSNDNQ---GIGFLHDPRRLNVALTRARY 920
Query: 1314 KLIMVGSCRTLSKVPLLKLLI 1334
LI++G+ R LS+ L LI
Sbjct: 921 GLIILGNARVLSRDQLWNNLI 941
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 208/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 477 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 535
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 536 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 594
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L + +F ++DE+ Q T P +
Sbjct: 595 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAEMQFRSILIDESTQATEPECMV 654
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 655 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 713
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 714 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 764
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 765 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLYTKL 823
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 824 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 880
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + LSK PL L++ EQ ++
Sbjct: 881 NPKALSKQPLWNHLLSYYKEQKALV 905
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 204/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G+ +L+ + +N AVD
Sbjct: 459 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGSGPVLVCAPSNIAVDQ 517
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N+ S+ E++K L Q+K
Sbjct: 518 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQTRNMESMPELQK-LQQLKDETGELS 576
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 577 SSDEKRYRALRRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 636
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 637 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 695
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 696 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 746
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT L+K + IGIITPY Q + + + S
Sbjct: 747 SSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 805
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 806 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 862
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 863 NPKALSKQPLWNHLLNYYKEQ 883
>gi|327404581|ref|YP_004345419.1| DEAD-like helicase [Fluviicola taffensis DSM 16823]
gi|327320089|gb|AEA44581.1| DEAD-like helicase [Fluviicola taffensis DSM 16823]
Length = 591
Score = 158 bits (399), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 208/458 (45%), Gaps = 86/458 (18%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
+S LN+ Q+ A+ +L++ +I G PGTGKT T+ A+ L+ RG +L+T+ +N+
Sbjct: 158 FSADLLNNSQQEAVGAILSSDLTTVIQGPPGTGKTHTLSIAIAELVNRGKKVLVTAPSNT 217
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAM---------------NINSVEEI 1044
AVDNL KL + I +R+G +E V E+ + + A I E++
Sbjct: 218 AVDNLCKKLIAAKISLLRVGNNEKVSAEVIPYTIDAYLEGGKTAQYSQTIKKQIQKTEQV 277
Query: 1045 KKR--------------------------------------LDQVKVVAVTCLGITNPLL 1066
R ++ V+A T + + N L
Sbjct: 278 ANRTIRNYTKEAADEKRQAKRDLRELQKELRKLAQDTEQQLIESSSVIAGTPVALFNALS 337
Query: 1067 TDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFR 1126
D FDV I+DEAGQ+ P++ F K VL GD QLPP+V S +A E G+ SL
Sbjct: 338 KDASFDVVILDEAGQSLAPLTWLVATFGKKLVLCGDPQQLPPVVFSNKAIELGLNKSLLE 397
Query: 1127 RLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
+S H Q L QYRM I+ N Y + L I + +I+ D++
Sbjct: 398 TVS--HLQKPVLLNEQYRMAPEIVSTINPYFYNNELQTAIG-IPSGEIQFIDMAGFGNGE 454
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNE-IEGKDIGIIT 1245
E + ++E D K+ ++L+++E + II
Sbjct: 455 TE------------NETTGSFENWDE------------VKVVRKLIESESLNPTQTTIIA 490
Query: 1246 PYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
PY++Q L++ ++ + + TID QG++++ I++SF RS NP L D+ R N
Sbjct: 491 PYSAQIALLQKTMG-TEWHVSTIDAIQGQEEENIVISFTRS--NPDGII-GFLRDYRRTN 546
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGI 1343
VA++RAK+K ++G TL LI+++ E +G+
Sbjct: 547 VAISRAKRKCYLIGDSATLGNDSFYSQLIHEI-ETNGV 583
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 205/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 406 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 464
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 465 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 523
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 524 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 583
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 584 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 642
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 643 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 693
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 694 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 752
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 753 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 809
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 810 NPKALSKQPLWNHLLNYYKEQ 830
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Rattus
norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Rattus
norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 254/585 (43%), Gaps = 87/585 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 342 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 398
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 399 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 458
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 459 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 504
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 505 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 564
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 565 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 623
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 624 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 683
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 684 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 736
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 737 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 849
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 850 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 894
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 254/585 (43%), Gaps = 87/585 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 342 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 398
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 399 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 458
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 459 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 504
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 505 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 564
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 565 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 623
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 624 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 683
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 684 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 736
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 737 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 849
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 850 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 894
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_b
[Mus musculus]
Length = 1113
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 254/585 (43%), Gaps = 87/585 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 342 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 398
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 399 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 458
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 459 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 504
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 505 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 564
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 565 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 623
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 624 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 683
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 684 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 736
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 737 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 849
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 850 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 894
>gi|317479605|ref|ZP_07938732.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
gi|316904267|gb|EFV26094.1| hypothetical protein HMPREF1007_01848 [Bacteroides sp. 4_1_36]
Length = 631
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/565 (25%), Positives = 247/565 (43%), Gaps = 94/565 (16%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
A G IT ++ F +VS++ R+ + A + EV D + F Y +
Sbjct: 95 ADGKITYMN-FTATVSYADETRMVAIMPGAGA---VMEVQETDNLGVQLYFDETSYRTMF 150
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L+ S+ R+ + S + F + + + W LN Q A+ KVL A+D
Sbjct: 151 EALEDTLRSKGNRLAELRDILLGTSKAGFRELYPVRFPW----LNSTQETAVNKVLCARD 206
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD + KL + ++ +RIG
Sbjct: 207 VAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNP 266
Query: 1022 EVVH---------KEIQKHCL---------------SAMNINSVEE---IKKRLDQVK-- 1052
V+ + + H L S S +E ++ R+ +++
Sbjct: 267 TRVNDKMLSFTYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDR 326
Query: 1053 -----------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
V+A T + + LL ++F +DEA Q + A
Sbjct: 327 ATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEAACWIAIRKAD 386
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
+ VL GDH QLPP ++ EA G+E +L ++ P +S L+ QYRM + IM+ +
Sbjct: 387 RVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSLLKVQYRMHEEIMKFPSQ 446
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y L S+ ++ + L+ P+ +++T + E +T
Sbjct: 447 WFYNGELEAASE------VRYRGI----------LDWDTPIHWIDTSEMDFKEEFVGETF 490
Query: 1216 N--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQANLIRHSLSV------ 1260
N EA L+ ++ N I G D GII+PY +Q +R+ +
Sbjct: 491 GRINKAEADLLLS-ELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASLKP 549
Query: 1261 --SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
S ++T+D +QG+++D I +S VR++E + L D R+NVA+TRA+ KL+++
Sbjct: 550 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLRRMNVAITRARMKLVIL 606
Query: 1319 GSCRTLSKVPLLKLL---INKVGEQ 1340
G TL + L I +G Q
Sbjct: 607 GEAETLKHHGFYRKLLEFIQNIGNQ 631
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense
mRNA reducing factor 1; Short=NORF1; AltName:
Full=Up-frameshift suppressor 1 homolog; Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Homo sapiens]
Length = 1129
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 205/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 482 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 540
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 541 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 599
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 600 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 659
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 660 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 718
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 719 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 769
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 770 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 828
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 829 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 885
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 886 NPKALSKQPLWNHLLNYYKEQ 906
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 205/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 482 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 540
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 541 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 599
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 600 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 659
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 660 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 718
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 719 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 769
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 770 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 828
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 829 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 885
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 886 NPKALSKQPLWNHLLNYYKEQ 906
>gi|160889253|ref|ZP_02070256.1| hypothetical protein BACUNI_01675 [Bacteroides uniformis ATCC 8492]
gi|156861260|gb|EDO54691.1| putative DNA helicase [Bacteroides uniformis ATCC 8492]
Length = 637
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 145/565 (25%), Positives = 247/565 (43%), Gaps = 94/565 (16%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
A G IT ++ F +VS++ R+ + A + EV D + F Y +
Sbjct: 101 ADGKITYMN-FTATVSYADETRMVAIMPGAGA---VMEVQETDNLGVQLYFDETSYRTMF 156
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L+ S+ R+ + S + F + + + W LN Q A+ KVL A+D
Sbjct: 157 EALEDTLRSKGNRLAELRDILLGTSKAGFRELYPVRFPW----LNSTQETAVNKVLCARD 212
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD + KL + ++ +RIG
Sbjct: 213 VAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNP 272
Query: 1022 EVVH---------KEIQKHCL---------------SAMNINSVEE---IKKRLDQVK-- 1052
V+ + + H L S S +E ++ R+ +++
Sbjct: 273 TRVNDKMLSFTYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDR 332
Query: 1053 -----------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
V+A T + + LL ++F +DEA Q + A
Sbjct: 333 ATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEAACWIAIRKAD 392
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
+ VL GDH QLPP ++ EA G+E +L ++ P +S L+ QYRM + IM+ +
Sbjct: 393 RVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSLLKVQYRMHEEIMKFPSQ 452
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y L S+ ++ + L+ P+ +++T + E +T
Sbjct: 453 WFYNGELEAASE------VRYRGI----------LDWDTPIHWIDTSEMDFKEEFVGETF 496
Query: 1216 N--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQANLIRHSLSV------ 1260
N EA L+ ++ N I G D GII+PY +Q +R+ +
Sbjct: 497 GRINKAEADLLLS-ELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASLKP 555
Query: 1261 --SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
S ++T+D +QG+++D I +S VR++E + L D R+NVA+TRA+ KL+++
Sbjct: 556 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLRRMNVAITRARMKLVIL 612
Query: 1319 GSCRTLSKVPLLKLL---INKVGEQ 1340
G TL + L I +G Q
Sbjct: 613 GEAETLKHHGFYRKLLEFIQNIGNQ 637
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 207/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 124 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 182
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 183 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 241
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 242 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 301
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 302 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 360
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 361 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 411
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 412 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 470
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 471 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 527
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + LSK PL L++ EQ ++
Sbjct: 528 NPKALSKQPLWNHLLSYYKEQKALV 552
>gi|417764049|ref|ZP_12412022.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417768495|ref|ZP_12416423.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|418683983|ref|ZP_13245176.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418706140|ref|ZP_13266990.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418715893|ref|ZP_13275980.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
str. UI 08452]
gi|400324361|gb|EJO76657.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400353881|gb|EJP06034.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|409949468|gb|EKN99444.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Pomona]
gi|410764209|gb|EKR34926.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410788121|gb|EKR81847.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
str. UI 08452]
gi|455669128|gb|EMF34296.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Pomona str. Fox 32256]
Length = 634
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 209/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISTRGILVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P ++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWISILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
+E E + L +QYRM I + Y L G E K + S+ P+
Sbjct: 423 AENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPF- 477
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 478 ------SNAFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|421118364|ref|ZP_15578704.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410009997|gb|EKO68148.1| UvrD/REP helicase N-terminal domain protein [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
Length = 634
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 209/457 (45%), Gaps = 79/457 (17%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+I + ++D +I G PGTGKT+T+ V L+ IL+++ TNSA D
Sbjct: 188 SLNESQKNAVIHSVLSEDVMIIHGPPGTGKTTTLTEIVSQLVAEEKKILVSAPTNSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVHKEIQKHCL 1033
L+ + ++ I +R+G R +V+ EI K
Sbjct: 248 LVESISTRGILVLRLGHPARVNEIAIHSTLDYKLFHHPDGKLLNEYRKDVI--EISKQAK 305
Query: 1034 SAMN-------------INSVEEIKKRLDQVKVVAVTCLGITNP------------LLTD 1068
V+E+KK + +++ + L ++P +L +
Sbjct: 306 KFKRNFGEKEREERKKLFTEVKELKKTIRSMEIGLIDSLVSSHPVIVSTPVASARGILEN 365
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+ FD C++DE+ Q P ++ + + +L GDH QLPP + S +N +E +LF +
Sbjct: 366 RTFDFCVLDESSQALEPAFWISILKSDRVILAGDHKQLPPTLFS---EKNYLETTLFEKA 422
Query: 1129 SE--EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL 1186
+E E + L +QYRM I + Y L G E K + S+ P+
Sbjct: 423 AENLESYGRVFLLDTQYRMKDEISAFPSKEFYSGLLKSGRSE----KERKSNFPKTFPF- 477
Query: 1187 KEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITP 1246
+++T + E +++NP EA L ++ L +N+ +I I++P
Sbjct: 478 ------SNAFQWIDTSGTDSEEVILDDSISNPFEADLQVRLCFLLKENDWPEDEITILSP 531
Query: 1247 YNSQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Y +Q LI L ++ + + TID +QGR+ CIL+ FVRS+ R S L + R
Sbjct: 532 YRAQVRLISEKLRDVGLTKINVSTIDSFQGRENRCILLGFVRSNLEGR---SGFLKESRR 588
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
INV +TRA+ L+ +G TLS+ P L LI E+
Sbjct: 589 INVGMTRARDLLLCIGDSSTLSQDPFLSKLIRFAEEK 625
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 161/585 (27%), Positives = 254/585 (43%), Gaps = 87/585 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 290 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 346
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 347 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 406
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 407 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 452
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 453 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 512
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 513 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 571
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 572 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 631
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 632 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 684
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 685 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 740
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 741 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 797
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 798 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 842
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 136/426 (31%), Positives = 201/426 (47%), Gaps = 59/426 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q AI VL K +LI G PGTGKT T + L M G +L+ + +N AVD
Sbjct: 447 LNQSQVDAIRSVLQ-KPLSLIQGPPGTGKTVTSATIIYHLSKMSGNQVLVCAPSNVAVDQ 505
Query: 1004 L----------LIKLKSQS-------IDF------VRIGRHEVVHKEIQKHCLSAMNINS 1040
L +++L ++S + F VR+ H ++ + + A + S
Sbjct: 506 LCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMSEHNSEFAKLSQLKIEAGELIS 565
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E K R L VV TC+G +P L+ KF ++DE+ Q+ P + P
Sbjct: 566 QDEKKFRQLTKAAEREILTNADVVCCTCVGAGDPRLSKIKFRSVLIDESTQSAEPECIIP 625
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
LM K VLVGDH QL P++ + +A + G+ SLF RL + Q I L +QYRM +
Sbjct: 626 LMLGCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQLRLQPI-LLNTQYRMHPCL 684
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
E + + Y L G + + V PW + P++F +
Sbjct: 685 SEFPSNMFYDGSLQNGVTQEQRIRKDVD-----FPWPVAEM----PMMFWSNIGNEEIST 735
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS-------- 1261
LN EA + KI K ++ +IG+ITPY Q + I ++ S
Sbjct: 736 SGTSYLNR-TEASNVEKIVTRFFKAGVKPAEIGVITPYEGQRSYIVTTMQNSGTSKKDLY 794
Query: 1262 -SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
VE+ ++D +QGR+KD I++S VRS+EN L D R+NVALTRAK L+++G+
Sbjct: 795 KGVEVASVDAFQGREKDFIVLSCVRSNENQ---GIGFLSDPRRLNVALTRAKYGLVILGN 851
Query: 1321 CRTLSK 1326
R LSK
Sbjct: 852 PRVLSK 857
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio rerio]
Length = 1100
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/441 (31%), Positives = 204/441 (46%), Gaps = 61/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 451 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 509
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 510 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 568
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 569 SSDEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 628
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 629 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 687
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 688 LSAFPSNIFYEGSLQNGVTAADRLK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 738
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT L+K + IGIITPY Q + + + S
Sbjct: 739 SSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 797
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 798 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 854
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + LSK PL L+N EQ
Sbjct: 855 NPKALSKQPLWNHLLNYYKEQ 875
>gi|354610036|ref|ZP_09027992.1| DEAD-like helicase [Halobacterium sp. DL1]
gi|353194856|gb|EHB60358.1| DEAD-like helicase [Halobacterium sp. DL1]
Length = 748
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 129/394 (32%), Positives = 179/394 (45%), Gaps = 38/394 (9%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN QRRA+ + A D I G PGTGKT T+V V + RG +L+T+++N AVDNL
Sbjct: 344 LNGYQRRALGWAVAADDVVCIHGPPGTGKTRTLVAFVAHAVARGERVLVTAHSNQAVDNL 403
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKE----IQKHCLSAMNINSVEEIKKR-LDQVKVVAVTCL 1059
L+ S D H V + + ++ + N E+ + +D VVA T
Sbjct: 404 LVG-DSTPDDAEEGTLHAAVAADSDVTVARYGRHSRNRVVAEQYRGTPVDGADVVAATTN 462
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG 1119
G FDV ++DEA Q + + A K VL GDH QLPP TEA E
Sbjct: 463 GAA--AFDRDAFDVAVVDEATQASRAATAIAHACAEKLVLAGDHRQLPPY-SVTEAGEGE 519
Query: 1120 MEISLFRRLSEEHPQAISALQ-SQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD 1178
M SLF L E + ++ L QYRM + I N Y RL +D A+
Sbjct: 520 MRPSLFETLVERYGDRVAVLLCRQYRMHEAIATFPNEAFYDGRLET-ADRNAD------- 571
Query: 1179 LSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
W L+ PV V+ E + ++ NP EA ++ L+ +
Sbjct: 572 ------W---TLDGFPPVSLVDVAGEERREER-GASVRNPQEAEVVVDRVTRLLDAGVSP 621
Query: 1239 KDIGIITPYNSQANLIRHSLS-----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNC 1293
D+G+I Y+ Q IR L + + T+D +QG ++D I+VSF RS NP
Sbjct: 622 ADVGVIAAYSGQVREIRSRLGTLDRETDGLTVDTVDSFQGGERDAIVVSFARS--NPEGN 679
Query: 1294 TSSL---LGDWHRINVALTRAKKKLIMVGSCRTL 1324
L R+NVALTRA+K L +VG TL
Sbjct: 680 AGFLEHSAEGPRRLNVALTRARKHLALVGDWDTL 713
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 132/432 (30%), Positives = 200/432 (46%), Gaps = 65/432 (15%)
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDNLLIKLKS 1010
A +K++ + +LI G PGTGKT T V L +G +++ + +N AVD L K++
Sbjct: 462 AAVKMVLQQPLSLIQGPPGTGKTVTSATIVYHLATKGDGQVIVAAPSNVAVDQLAEKIEK 521
Query: 1011 QSIDFVRIG-----------RHEVVHKEIQKHCLSAMN---------INSVEEIKKR--- 1047
+ VRI H +H ++Q+ N +S+ E+ +
Sbjct: 522 TGLKVVRIVARSREHVNSAVEHLALHYQVQRIAEKEKNGQLAKLQRLKDSIGELSQEDEK 581
Query: 1048 -------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL-MF 1093
+ VV VT +G + L +F + DE+ Q T P +L P+ M
Sbjct: 582 RYYKALKKIENDIIQNADVVCVTAVGAGDRRLEKYRFRQVLFDESTQATEPETLIPIIMG 641
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A + V+VGDH QL P+V A G+ SLF RL Q I LQ QYRM + E
Sbjct: 642 AKQVVMVGDHCQLGPVVTCRSASRAGLSQSLFERLIFMGVQPIR-LQVQYRMHPCLSEFP 700
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPAYEAKD 1211
+ Y L G E A D PW PC +P++F + A
Sbjct: 701 SNAFYEGTLQNGVTEAERA-----DSEDVFPW------PCPSKPMLFWAQMGVEEMSASG 749
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV-------- 1263
+ LN EA + KI L++N I ++IG++TPY Q + + L+ + V
Sbjct: 750 YSYLNRG-EAYAVEKIVTHLLQNGIAPEEIGVVTPYEGQRAYVVNYLTRTGVLHPSIYQE 808
Query: 1264 -EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCR 1322
E+ ++D +QGR+K I+V+ VRS N R L D R+NVALTRAK L++VG+ +
Sbjct: 809 VEVASVDAFQGREKQYIIVTCVRS--NDRQGIG-FLNDPRRLNVALTRAKLGLMIVGNPK 865
Query: 1323 TLSKVPLLKLLI 1334
L+K PL + ++
Sbjct: 866 VLAKQPLFRDML 877
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 162/581 (27%), Positives = 249/581 (42%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D G+ I V ++ + + R+S+
Sbjct: 326 LPKTDSDMRLMQGDEICLRYKGDLAPPWKGIGHVIK---VPDNYGDEIAIELRSSAGAPI 382
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +++ + P RF
Sbjct: 383 EIPHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRF 442
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 443 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 488
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N+
Sbjct: 489 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQTRNME 548
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 549 SMPELQK-LQQLKDETGELSSSDEKRYRALRRTAERELLMNADVICCTCVGAGDPRLAKM 607
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P + +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 608 QFRSILIDESTQATEPECMVPAVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 667
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 668 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTSADRVK-KGFDFQ----WPQ- 720
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT L+K + IGIITPY
Sbjct: 721 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTRLLKAGAKPDQIGIITPYE 776
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 777 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 833
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 834 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 874
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 211/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 292 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 351
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 352 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 411
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 412 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 471
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 472 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 530
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 531 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 579
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KIT ++ ++ + IG+ITPY Q A L++
Sbjct: 580 TQGQEEIAGSGTSYLNR-TEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 638
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 639 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 695
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 696 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 724
>gi|301116633|ref|XP_002906045.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
gi|262109345|gb|EEY67397.1| DNA polymerase alpha-associated DNA helicase A, putative
[Phytophthora infestans T30-4]
Length = 988
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 141/465 (30%), Positives = 219/465 (47%), Gaps = 77/465 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN+ Q A+ L +KD ALI G PGTGKT+T+V + + R +L+ + +N AVDN
Sbjct: 209 LNESQVEAVRFALASKDLALIHGPPGTGKTTTVVEFILQAVTRFDLKVLVCAPSNIAVDN 268
Query: 1004 LLIKLKS------QSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE--------------- 1042
+L KL S + + RIG V +I +CL A I S E
Sbjct: 269 VLDKLASTCSTLRKKLKLTRIGHPARVLPQILNYCLDA-KIESAEGTEIVNDIRQEMSSM 327
Query: 1043 -------------------------EIKKRLDQV--------KVVAVTCLGITNPLLTDK 1069
EI+ R +V VV T +G + LL D
Sbjct: 328 QKKLQKTRDKSERYRLRREMKANRKEIRTREQKVVGDIIRHSDVVFATNVGAASKLLKDV 387
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL- 1128
FD+ I+DEA Q P++ A + VL GDH QLPP ++S A G+E++LF R+
Sbjct: 388 TFDLVIIDEAAQALEASCWIPMLKAKRCVLAGDHLQLPPTIKSRAAAAKGLEVTLFDRVT 447
Query: 1129 SEEHPQAI-SALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLK 1187
S + Q+I L +QYRM Q I E S+ +Y L A+ K+ +L S +
Sbjct: 448 SYTNTQSIVKMLDTQYRMHQDISEWSSQAMYKGELKSFE---GVARRKLHELPHVSISKE 504
Query: 1188 EALNPCRPVIFVNTDMLPAYEAKDHQ--------TLNNPVEACLIAKITQELVKNEIEGK 1239
+ L ++ +AKD + + +N EA ++A+ L+K ++ +
Sbjct: 505 DELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSKSNEGEAHVVARHVSALLKAGLKEE 564
Query: 1240 DIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSL 1297
++ +ITPYN Q ++ L S +EI ++D +QG +K+ +++S VRS+ + +
Sbjct: 565 EVAVITPYNKQVQTLKALLLESYPKLEIRSVDGFQGCEKEAVVMSLVRSNASRQ---VGF 621
Query: 1298 LGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN---KVGE 1339
L D R+NVA+TRAK+ + +V T+S L L+ K GE
Sbjct: 622 LADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKHFEKYGE 666
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 211/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 448 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 507
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 508 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 567
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 568 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 627
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 628 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 686
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 687 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 735
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KIT ++ ++ + IG+ITPY Q A L++
Sbjct: 736 TQGQEEIAGSGTSYLNR-TEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 794
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 795 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 851
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 852 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 880
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 209/437 (47%), Gaps = 64/437 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 463 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVRLNGGPVLVCAPSNTAVDQ 521
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI-----------------QKHCLSA 1035
L K+ S+ VR+ R + +H +I + LS+
Sbjct: 522 LTEKIHRTSLKVVRVCAKSREAIESPVSFLALHNQIRNMEQNSDLKKLQQLKDETGELSS 581
Query: 1036 MNINSVEEIKKR-----LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ +KK+ L+ V+ TC+G +P L KF ++DE+ Q+T P + P
Sbjct: 582 SDEKRYRSLKKQAERELLEAADVICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVP 641
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A + G+ SLF RL + L+ QYRM +
Sbjct: 642 VVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 700
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ + Y L G ++E K+KV PW +P P+ F+ T
Sbjct: 701 SQFPSNFFYEGSLQNGVCAEE---RKLKVD-----FPWP----SPDTPMFFLVTQGQEEI 748
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KIT +K ++ IGIITPY Q A L++ HS
Sbjct: 749 AGSGTSYLNR-TEASNVEKITTRFLKAGVKPDQIGIITPYEGQRAYLVQYMQYQGSLHSK 807
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+EI ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 808 LYQEIEIASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 864
Query: 1319 GSCRTLSKVPLLKLLIN 1335
G+ + LSK L L+N
Sbjct: 865 GNPKVLSKQQLWNHLLN 881
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform CRA_a
[Mus musculus]
Length = 1131
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 207/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 484 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 542
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 543 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 601
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 602 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 661
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 662 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 720
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 721 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 771
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 772 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 830
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 831 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 887
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + LSK PL L++ EQ ++
Sbjct: 888 NPKALSKQPLWNHLLSYYKEQKALV 912
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 211/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 448 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 507
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 508 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 567
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 568 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 627
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 628 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 686
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 687 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 735
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KIT ++ ++ + IG+ITPY Q A L++
Sbjct: 736 TQGQEEIAGSGTSYLNR-TEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 794
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 795 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 851
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 852 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 880
>gi|404449013|ref|ZP_11014005.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
gi|403765737|gb|EJZ26615.1| type III restriction enzyme, res subunit [Indibacter alkaliphilus
LW1]
Length = 642
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 129/461 (27%), Positives = 207/461 (44%), Gaps = 75/461 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ A D A+I G PGTGKT+T+V A++ L + +L+ + +N+AVD L
Sbjct: 183 LNSRQNEAVAMASKATDLAIIHGPPGTGKTTTLVAAIEKSLETNSQVLVCAPSNAAVDLL 242
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN-----SVEEIKKRLDQV-------- 1051
+ KL ++I +R+G V ++I L A N ++ +KK +D++
Sbjct: 243 VEKLSERNISALRMGHPARVEEQILLQTLDAKIANHASYKDLKRLKKSIDELVKMGKKYK 302
Query: 1052 ----------------------------------------KVVAVTCLGITNPLLTDKKF 1071
+V+A T +G + L F
Sbjct: 303 RSFGHEERMQRRRYFEEADRCRDEAKSLEDYIVYDIFQSSQVIACTLVGAASSYLKSFSF 362
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE 1131
V +DEAGQ + P+ A K V+ GDH QLPP ++S EA ++G+ I+LF +
Sbjct: 363 PVVFIDEAGQGLEAATWIPIQKAKKVVMAGDHLQLPPTIKSFEASKSGLGITLFEKAILR 422
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
P + L+ QYRM + IM SN Y L + A+ ++ + N
Sbjct: 423 QPSSAVMLREQYRMHELIMGFSNRHFYQGELMAAPNTQAHYILEEEPVLEFVDTSGSGYN 482
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
V + L Y ++ + N +E+ + ++L + E IG+I PY +Q
Sbjct: 483 EQ-----VEEESLSTYNLEEARFALNYLESFVKRIGLRQLKEREF---SIGLIAPYRAQV 534
Query: 1252 NLIRHSL----------SVSS-VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD 1300
+ L S S + I +ID +QGR++D +L+S VRS+ L D
Sbjct: 535 RRLNELLFDTYEFPNLRSYSEFLTIDSIDGFQGRERDVMLISLVRSNAKGE---IGFLAD 591
Query: 1301 WHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NVALTRAK+K+I++G TLS ++ V E++
Sbjct: 592 TRRMNVALTRAKRKMIVIGDSATLSSHSFYTAFLDYVEEKN 632
>gi|356501783|ref|XP_003519703.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 928
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 150/588 (25%), Positives = 256/588 (43%), Gaps = 85/588 (14%)
Query: 824 LRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRI 883
L GD V + T A+ + I +S + L R+ L + RI
Sbjct: 323 LSPGDMVCVRTYDSTGAITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKSVRI 382
Query: 884 DKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI-WSE 942
D+ + + N L L + + + + A F G + + W+E
Sbjct: 383 DRIQGLADTLTYERNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNQLVDWAE 442
Query: 943 KSLN---------DDQRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKALLMRGASIL 992
++L+ D Q+RAI L K L++ G PGTGKT + + + +G +L
Sbjct: 443 ENLDARLGNETFDDSQQRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIVCAVQQGERVL 502
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGR-------------HEVVHKEIQ---------- 1029
+T+ TN+AVDN++ KL + ++ VR+G E+V+ ++
Sbjct: 503 VTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERKK 562
Query: 1030 -------KHCLSAMNINS-VEEIKKRLDQ----------------VKVVAVTCLGITNPL 1065
+HCL ++ S + ++ K+L + +VV T G +PL
Sbjct: 563 SDLRKDLRHCLKDDSLASGIRQLLKQLGRSLKKKEKQTVVEVLSSAQVVLATNTGAADPL 622
Query: 1066 LTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
+ FD+ ++DEAGQ P P++ + +L GD QL P++ S +A E G+ ISL
Sbjct: 623 IRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLGISL 682
Query: 1125 FRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
R + H ++ L +QYRM I ++ +YG L +++ S L S
Sbjct: 683 LERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLK-------SSETVFSHLLVNS 735
Query: 1184 PWLKEALNPCRPVIFVNTDMLP----AYEAKDH------QTLNNPVEACLIAKITQELVK 1233
P++K P++ ++T M P + ++H +L N EA ++ + L+
Sbjct: 736 PFVKPTWITQCPLLLLDTRM-PYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIY 794
Query: 1234 NEIEGKDIGIITPYNSQANLIRHSL----SVSSVEIHTIDKYQGRDKDCILVSFVRSSEN 1289
+ I + +PY +Q L+R L + E+ TID +QGR+ D +++S VRS+
Sbjct: 795 AGVSPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNTL 854
Query: 1290 PRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LGD RINVA+TRA+K L +V T+ L L+ +
Sbjct: 855 G---AVGFLGDSRRINVAITRARKHLALVCDSSTICHNTFLARLLRHI 899
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 207/438 (47%), Gaps = 64/438 (14%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVD 1002
+LN QR A+ + A LI G PGTGKT T V+ L+ +R + +L+ + +N AVD
Sbjct: 429 ALNASQRAAVAHAI-ASPLTLIQGPPGTGKTVTSAAIVRELVRLRRSRVLVCAPSNVAVD 487
Query: 1003 NLLIKLKSQSIDFVRIGR---------------HEVVHKEIQKHCLSAMNIN-SVEEIKK 1046
+L +KL++ + VR+ H V I + + ++ S E+
Sbjct: 488 HLALKLRAAGLKVVRLAARSREDIESEATPLALHTQVRAAIPRRVRTLVDKQASGGELDA 547
Query: 1047 R----------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
R + V+ TC+G + L + +F + ++DE+ Q T P +L P
Sbjct: 548 RAKARIARSWRAAEQKLISSADVICTTCVGADDRRLEEYEFPIVLVDESTQATEPEALIP 607
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
+ +K VLVGDH QL P+V A G+ SLF RL + L+ QYRM +
Sbjct: 608 ITRGAKQVVLVGDHQQLGPVVLDPAASAAGLRRSLFERLVSMGHVPLR-LEVQYRMHPAL 666
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
E ++ + Y L G SD+ PW P RP++F
Sbjct: 667 SEFASNMFYEGSLLNGVTSDDRTRPGADF-------PWPV----PDRPMMFWANYGKEEI 715
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS----- 1262
A LN VEA + KI LV++ + IG+ITPY Q I L ++S
Sbjct: 716 GANGSSYLNR-VEAMNVDKIIARLVRDGVSPDQIGVITPYEGQRVYIWQYLKLNSTVPKS 774
Query: 1263 ------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
VE+ ++D +QGR+KD I++S VR++E+ R+ L D R+NVALTRAK LI
Sbjct: 775 ALNELEVEVSSVDAFQGREKDYIILSCVRANED-RDI--GFLKDSRRLNVALTRAKFGLI 831
Query: 1317 MVGSCRTLSKVPLLKLLI 1334
++G+ R+LSK L L+
Sbjct: 832 ILGNPRSLSKNKLWNSLL 849
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Rattus
norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Rattus
norvegicus]
Length = 1124
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 207/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 477 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 535
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 536 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 594
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 595 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 654
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 655 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 713
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 714 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 764
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 765 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 823
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 824 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 880
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + LSK PL L++ EQ ++
Sbjct: 881 NPKALSKQPLWNHLLSYYKEQKALV 905
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName: Full=Nonsense
mRNA reducing factor 1; Short=NORF1; AltName:
Full=Up-frameshift suppressor 1 homolog; Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 207/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G +L+ + +N AVD
Sbjct: 477 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQ 535
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 536 LTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMDSMPELQK-LQQLKDETGELS 594
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 595 SADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQFRSILIDESTQATEPECMV 654
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A + G+ SLF RL + I LQ QYRM
Sbjct: 655 PVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 713
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G K K D W + P +P+ F T
Sbjct: 714 LSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ----PDKPMFFYVTQGQEEIA 764
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
+ LN EA + KIT +L+K + IGIITPY Q + + + S
Sbjct: 765 SSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYEGQRSYLVQYMQFSGSLHTKL 823
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VEI ++D +QGR+KD I++S VR++E+ L D R+NVALTRA+ +I+VG
Sbjct: 824 YQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLNDPRRLNVALTRARYGVIIVG 880
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + LSK PL L++ EQ ++
Sbjct: 881 NPKALSKQPLWNHLLSYYKEQKALV 905
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/449 (30%), Positives = 211/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 435 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 494
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 495 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 554
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 555 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 614
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 615 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 673
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 674 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 722
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KIT ++ ++ + IG+ITPY Q A L++
Sbjct: 723 TQGQEEIAGSGTSYLNR-TEASNVEKITTRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 781
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 782 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 838
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 839 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 867
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/444 (31%), Positives = 212/444 (47%), Gaps = 65/444 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G IL+ +
Sbjct: 467 FSAANLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVRLNGGPILVCAP 526
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHCL 1033
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 527 SNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMEQNSDLKKLQQLKD 586
Query: 1034 SAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++S +E + R L+ V+ TC+G +P L KF ++DE+ Q+T
Sbjct: 587 ETGELSSSDEKRYRMLKKQAERELLEAADVICCTCVGAGDPRLQRIKFSSILIDESMQST 646
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A + G+ SLF RL + L+ Q
Sbjct: 647 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERLVVLGIRPFR-LEVQ 705
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + + Y L G ++E K+KV PW +P P+ F+
Sbjct: 706 YRMHPELSQFPSNFFYEGSLQNGVCAEE---RKLKVD-----FPWP----SPDTPMFFLV 753
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KIT +K ++ + IGIITPY Q A L++
Sbjct: 754 TQGQEEIAGSGTSYLNR-TEASNVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQY 812
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +EI ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 813 QGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 869
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLIN 1335
K +I+VG+ + LSK L L+N
Sbjct: 870 KYGIIIVGNPKVLSKQQLWNHLLN 893
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 160/585 (27%), Positives = 253/585 (43%), Gaps = 87/585 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 342 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 398
Query: 875 SLLHE-----VWR---IDK-DEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ DK + +F+V ++ ++ + + + P RF
Sbjct: 399 EVTHNFQVDFVWKSTSFDKMQSALKTFAVEETSVSGYIYHKLLGHEVEDVFIKCQLPKRF 458
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + + I G PGTGKT T V L
Sbjct: 459 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSFIQGPPGTGKTVTSATIVYHL 504
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 505 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 564
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 565 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 623
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 624 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 683
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 684 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 736
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 737 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 792
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 793 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 849
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
D R+NVALTRA+ +I+VG+ + LSK PL L++ EQ ++
Sbjct: 850 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLSYYKEQKALV 894
>gi|298704767|emb|CBJ28363.1| DNA replication helicase Dna2, putative [Ectocarpus siliculosus]
Length = 788
Score = 157 bits (396), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/506 (25%), Positives = 215/506 (42%), Gaps = 126/506 (24%)
Query: 403 EERAVHLWEDWFHTVIAPGDTVNVI-------------GE---FDDQGKCDVGREN---N 443
++R + L DW+ + PGD V+V+ GE +++ DV +N
Sbjct: 154 QQRKITLLGDWYDCEVEPGDGVHVLFPMPAAAVAAAAAGEGLGMEEEASRDVVVDNASGR 213
Query: 444 FLIVHPDVLVSGTRVAASFSCPRRSVLDERLKC-SERSISALLGTLLHQIFQAGLMKE-- 500
++VHPD+LVS T+VA + +C R++VL RL + +S +A++G L H++F+ L+
Sbjct: 214 LVVVHPDILVSPTKVAETVACARKAVLQSRLASDASKSKAAVMGNLKHELFETSLLAAAA 273
Query: 501 ---------------------IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEA 539
+ T +++ E ++ +E+LY G +E+ L+
Sbjct: 274 AAAAAAAPGWQGQGRGGGAPPLLTPQYMAELVDRIVVSQLEALYGAGFDEDAARGELLSV 333
Query: 540 IPKMLNWIILF-------------------------------------KDSQDLNTPTVD 562
+L+W F + N
Sbjct: 334 SGSILDWHRSFLVRNGGGGGGGSSGLRRSPHSGGGGGGRSPGSGRSNASAAGGNNGGMAS 393
Query: 563 FGSDGL--KKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIES--KRNEINGMILPLEF 618
SDG + +S V E+ W+P GLKG++DA++ +E +++P+E
Sbjct: 394 LTSDGAMAATVAVSRVLATEDDVWSPVLGLKGIMDATVEAVVEPLVGGGGAPSLVMPVEV 453
Query: 619 KTGKIPNGQSSMEHRAQVILYTLLMSERYLKHID-SGLLYYLQSD--QTQGVMVQRSDLV 675
KTGK G+++ HRAQV+LYTLL+ RY SGLL Y +D +T+ V +++
Sbjct: 454 KTGKR-KGEANSTHRAQVMLYTLLLRMRYGHDASTSGLLVYTAADGLRTELVSPVAAEIR 512
Query: 676 GLIMRRNEFANDIIK----------------ASTTQQLPPMLR----------------- 702
LI+ RN A + + LPP++R
Sbjct: 513 ALILARNRLATGMAEIGRVGLVGGDADGGGGGGGGATLPPVIRRPRECGMCFQNSECMLY 572
Query: 703 ---AYGGNKECSGLG-NMFDSHIYHLTTAHCSFLRHWDRLIDLEAKEMQVVKNEIWCSRG 758
A GG+ + SGL +FDS + HL+ AH +F WDR IDLEAK + V+ +W G
Sbjct: 573 HRAAEGGDADSSGLEPGVFDSKVGHLSEAHLAFFSRWDRTIDLEAKIGEQVRRTMWQESG 632
Query: 759 SGGNHFT-GCLSSIVLDASNEHQKSY 783
T C+S +V E + +
Sbjct: 633 PERESRTQKCMSGLVWLGERERDEGF 658
>gi|67901330|ref|XP_680921.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|40742648|gb|EAA61838.1| hypothetical protein AN7652.2 [Aspergillus nidulans FGSC A4]
gi|259483986|tpe|CBF79824.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_2G01090)
[Aspergillus nidulans FGSC A4]
Length = 686
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 196/437 (44%), Gaps = 84/437 (19%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LND Q+ AI L ++D ALI G PGTGKT T++ + ++ R +L+ +N +VDN
Sbjct: 247 TLNDSQKEAIQFALASRDIALIHGPPGTGKTHTLIELIIQMVKRNLRVLVCGPSNISVDN 306
Query: 1004 LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ-------- 1050
++ +L I VRIG + + H L + S V +++K +D+
Sbjct: 307 IVERLAPSKIPVVRIGHPARLLPSVLDHSLEVLTQTSDAAAIVRDVRKEIDEKHASIRKT 366
Query: 1051 ----------------------------------VKVVAVTCLGITNPLLTDKKFDVCIM 1076
VV T G L ++KFDV I+
Sbjct: 367 RFGREKRAIYQDIRELRREFRERESKCVDNLVRGSSVVLATLHGAGGHQLKNQKFDVVII 426
Query: 1077 DEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQST-----EARENG---------MEI 1122
DEA Q PL+ A K VL GDH QLPP V+ST EA E+G +E
Sbjct: 427 DEASQALEAQCWIPLLSAPKVVLAGDHLQLPPTVKSTPHKTKEAGEDGEQDANGSFSLEK 486
Query: 1123 SLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
+LF RL H I L +QYRM + IM + +Y +L IA +K L
Sbjct: 487 TLFDRLLSLHGPGIKRMLTTQYRMHENIMRFPSDELYESKL------IAAESVKSRLLKD 540
Query: 1182 CSPWLKEALNPCRPVIF-----------VNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
+ E + PV+F V+ + E+ ++ +N +EA ++A+
Sbjct: 541 LPYNVHETDDTKEPVVFWDTQGGDFPEKVDDEEFAKKESLLGESKSNEMEALVVARHVDN 600
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
LV+ + +DI +ITPYN Q ++ L +E+ ++D +QGR+K+ ++VS VRS+
Sbjct: 601 LVQAGVRPEDIAVITPYNGQLAVLSQMLREKYPDLELGSVDGFQGREKEAVVVSLVRSNS 660
Query: 1289 NPRNCTSSLLGDWHRIN 1305
LG+ R+N
Sbjct: 661 ---EHEVGFLGEKRRLN 674
>gi|219117907|ref|XP_002179739.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408792|gb|EEC48725.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 283
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 157/272 (57%), Gaps = 34/272 (12%)
Query: 1105 QLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSC 1164
QLPPLV S A G S+ +RL+E+HP ++ L QYRM + I +LSN ++Y L C
Sbjct: 2 QLPPLVSSDLADMGGFGESMLKRLAEKHPDSVCQLTFQYRMHEDICQLSNDIVYAGSLKC 61
Query: 1165 GSDEIANAKI----------KVSDLSSCSPWLKEALNPCRPVIFVNTDM----------- 1203
G+D++ K+ + D+++ + WL +++P PV+F++TD
Sbjct: 62 GNDDVRYRKLDLPGFPENMGNIGDVAT-NAWLMRSVDPDFPVVFLDTDKIRLDLSSKGEG 120
Query: 1204 LPAYEA----KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS 1259
L A E +D ++ N VEA ++ I + + IE + +G+I P+ +Q ++ S
Sbjct: 121 LEALERTLRNRDGGSIVNYVEARIVQLIVEGFLSCGIEAQAVGVICPFRAQLRVMDECAS 180
Query: 1260 VSS-----VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
++S +E+ TID+YQGRDK ++VSFVRS+E R LL D+ R+NVA+TRAK K
Sbjct: 181 LASWKSKGLEMSTIDRYQGRDKPVVVVSFVRSNEKGR--VGRLLQDFRRLNVAITRAKCK 238
Query: 1315 LIMVGSCRTL-SKVPLLKLLINKVGEQSGILN 1345
L+MVGS TL + +LK ++N++ + +++
Sbjct: 239 LVMVGSFTTLYAGSNVLKPVLNRMRNKDNVVS 270
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1 (rent1)
[Tribolium castaneum]
Length = 1090
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 210/444 (47%), Gaps = 67/444 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 442 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 500
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQK-------HCLSAMN-----INS 1040
L K+ ++ VR+ R + +H +I+K L + ++S
Sbjct: 501 LTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHNQIRKMEANTELQKLQQLKDETGELSS 560
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + R L+ V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 561 VDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLVRLKFHSILIDESMQATEPECMVP 620
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 621 VVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 679
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLP 1205
+ Y L G +DE KI PW P RP+ F T
Sbjct: 680 SRFPSNFFYEGSLQNGVCADERKLNKIDF-------PW------PVIDRPMFFHVTQGQE 726
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------H 1256
LN EA + KI +++ ++ + IG+ITPY Q A L++ H
Sbjct: 727 EIAGSGTSYLNR-TEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYMQYQGSLH 785
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
S + +EI ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I
Sbjct: 786 SKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGII 842
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQ 1340
+VG+ + LSK PL L++ EQ
Sbjct: 843 IVGNPKVLSKQPLWNHLLSFYKEQ 866
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 200/432 (46%), Gaps = 64/432 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDN 1003
LN Q +A+ +V LI G PGTGKTST V ++ L S IL+ + +N AVD+
Sbjct: 372 LNYSQEQAL-RVALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDH 430
Query: 1004 LLIKLKSQSIDFVR---------------IGRHEVVHKEIQ--------KHCLSAMNI-- 1038
L ++ + VR IG V I K L +M
Sbjct: 431 LAQRVSGTGLKVVRLQAKYRNDIPCSVESIGLERQVRDYINASSGLERLKELLDSMQTGK 490
Query: 1039 -----------NSVEEIKKR-LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPV 1086
+ VE+I++ L VV TC+G + L KF ++DEA Q T P
Sbjct: 491 SLNDKDYGTYKDGVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPE 550
Query: 1087 SLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM 1145
L PL+ +K +LVGDH QL PLV ST A + G + SLF RL + + L QYRM
Sbjct: 551 VLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVR-LDVQYRM 609
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP 1205
+ + Y L G + D S PW + +P+ F N
Sbjct: 610 NPSLSFFPSHHYYEGTLQNG------VTAEQRDASEVFPWP----DVTKPIFFYNATGNE 659
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--- 1262
+ LN EA L +I +L++ +E DIG+ITPY SQ +R LS S
Sbjct: 660 ELGSNGRSYLNR-AEAALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLP 718
Query: 1263 ------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
VEI ++D +QGR+K+ I++S VRS N R + + D R+NV+LTRAK+ LI
Sbjct: 719 MEVYDRVEISSVDAFQGREKEFIILSCVRS--NHRQ-GAGFVTDGRRLNVSLTRAKRGLI 775
Query: 1317 MVGSCRTLSKVP 1328
++G+ + S+ P
Sbjct: 776 IMGNVQLFSRYP 787
>gi|398411081|ref|XP_003856885.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
gi|339476770|gb|EGP91861.1| hypothetical protein MYCGRDRAFT_34379 [Zymoseptoria tritici IPO323]
Length = 685
Score = 156 bits (395), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 251/570 (44%), Gaps = 111/570 (19%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
A G+IT +R +++V+ K D D ++W + ++ + R +
Sbjct: 114 AEGVITRTNRTNITVALDK----------EDVDVPNGKLWLV---KLANDVTHKRLSQTM 160
Query: 902 LFLQSAQSSQ---LRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLT 958
LQ Q S+ L +++ +P + D + W++ +LND Q+ AI L
Sbjct: 161 TRLQKMQPSEHSILTQVLFGHSSPT----PISESDLKAAIEWNDPTLNDSQKDAIQFALA 216
Query: 959 AKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI 1018
+++ ALI G PGTGKT T++ + ++ +L+ +N +VDN++ +L ++ VR+
Sbjct: 217 SREVALIHGPPGTGKTHTLIELILQMVKLKLRLLVCGPSNISVDNIVERLAPHKVNMVRL 276
Query: 1019 GRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK--------------------- 1052
G + + H + ++ S V +++ +D +
Sbjct: 277 GHPARLLPGVLSHSMEYLSRTSDAAAIVTDVRNEMDAKQASIRKTRNGRERRVIYGELKD 336
Query: 1053 ---------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
VV T G L D++FDV I+DEA Q P+
Sbjct: 337 LRKEYRQREGRVVSDLLRGSGVVLSTLHGSGGYQLKDQQFDVVIVDEASQALEAQCWIPV 396
Query: 1092 M--FASKFVLVGDHYQLPPLVQSTEAR---------ENG--------MEISLFRRLSEEH 1132
+ ASK +L GDH QLPP ++S ++ EN +E +LF RL H
Sbjct: 397 LSSGASKLILAGDHLQLPPTIKSLNSKTAKKTSTKVENATEGEDHVKLETTLFDRLLALH 456
Query: 1133 PQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
I L +QYRM IM+ + +Y +L IA +K L +++ +
Sbjct: 457 GSKIKRMLTTQYRMHDLIMQYPSEALYEGKL------IAAEAVKARLLHDLPYEVRKTDD 510
Query: 1192 PCRPVIFVNT---DMLPAYE-----AKDHQTL-----NNPVEACLIAKITQELVKNEIEG 1238
PV+F +T D E AK +L N EA + + L++ ++
Sbjct: 511 TSEPVVFYDTAGGDFPEKTEDDNSGAKGKSSLLAESKVNEYEAGIAQLHVKSLIEAGVKA 570
Query: 1239 KDIGIITPYNSQANLIRHSLS--VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
+DI IITPYN Q L+ L +E+ ++D +QGR+K+ ++VS VRS NP +
Sbjct: 571 EDIAIITPYNGQLALLSQMLKDRYPGIELESVDGFQGREKEAVIVSLVRS--NPEHEV-G 627
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
L + R+NVA+TR K+ L+++G T+ +
Sbjct: 628 FLAEKRRLNVAMTRPKRALVVIGDSETICR 657
>gi|423303764|ref|ZP_17281763.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|423307517|ref|ZP_17285507.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
gi|392687095|gb|EIY80392.1| hypothetical protein HMPREF1072_00703 [Bacteroides uniformis
CL03T00C23]
gi|392690126|gb|EIY83397.1| hypothetical protein HMPREF1073_00257 [Bacteroides uniformis
CL03T12C37]
Length = 610
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 247/565 (43%), Gaps = 94/565 (16%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
A G IT ++ F +VS++ R+ + A + EV D + F Y +
Sbjct: 74 ADGKITYMN-FTATVSYADETRMVAIMPGAGA---VMEVQETDNLGVQLYFDETSYRTMF 129
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L+ S+ R+ + S + F + + + W LN Q A+ KVL A+D
Sbjct: 130 EALEDTLRSKGNRLAELRDILLGTSKAGFRELYPVRFPW----LNSTQETAVNKVLCARD 185
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD + KL + ++ +RIG
Sbjct: 186 VAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNP 245
Query: 1022 EVVH---------KEIQKHCL---------------SAMNINSVEE---IKKRLDQVK-- 1052
V+ + + H L S S +E ++ R+ +++
Sbjct: 246 TRVNDKMLSFTYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDR 305
Query: 1053 -----------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
V+A T + + LL ++F +DEA Q + A
Sbjct: 306 ATALEIQINAELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEAACWIAIRKAD 365
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
+ VL GDH QLPP ++ EA G+E +L ++ P +S L+ QYRM + IM+ +
Sbjct: 366 RVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSLLKVQYRMHEEIMKFPSQ 425
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y L A +++ + L+ P+ +++T + E +T
Sbjct: 426 WFYNGELE------AAPEVRYRGI----------LDWDTPIHWIDTSEMDFKEEFVGETF 469
Query: 1216 N--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQANLIRHSLSV------ 1260
N EA L+ ++ N I G DIGII+PY +Q +R +
Sbjct: 470 GRINKAEADLLLS-ELKIYINRIGGNRILEEKIDIGIISPYKAQVQYLRSKIKADASLKP 528
Query: 1261 --SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
S ++T+D +QG+++D I +S VR++E + L D R+NVA+TRA+ KL+++
Sbjct: 529 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLRRMNVAITRARMKLVIL 585
Query: 1319 GSCRTLSKVPLLKLL---INKVGEQ 1340
G TL + L I +G Q
Sbjct: 586 GEAETLKHHGFYRKLLEFIQNIGNQ 610
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 443 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCA 502
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 503 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 562
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 563 DETGELSSADEKRYRSLKRAAENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQS 622
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 623 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 681
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 682 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 728
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 729 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 787
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 844
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 845 RAKYGIIIVGNPKVLAKQQLWNHLLN 870
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 443 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCA 502
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 503 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 562
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 563 DETGELSSADEKRYRILKRAAENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQS 622
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 623 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 681
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 682 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 728
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 729 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 787
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 844
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 845 RAKYGIIIVGNPKVLAKQQLWNHLLN 870
>gi|345513302|ref|ZP_08792824.1| DNA helicase [Bacteroides dorei 5_1_36/D4]
gi|423232651|ref|ZP_17219051.1| hypothetical protein HMPREF1063_04871 [Bacteroides dorei CL02T00C15]
gi|423247341|ref|ZP_17228391.1| hypothetical protein HMPREF1064_04597 [Bacteroides dorei CL02T12C06]
gi|345456255|gb|EEO47155.2| DNA helicase [Bacteroides dorei 5_1_36/D4]
gi|392623744|gb|EIY17846.1| hypothetical protein HMPREF1063_04871 [Bacteroides dorei CL02T00C15]
gi|392632749|gb|EIY26706.1| hypothetical protein HMPREF1064_04597 [Bacteroides dorei CL02T12C06]
Length = 1108
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 169/570 (29%), Positives = 258/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVIL---STESDRLA---VASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L + +SD + V G I +I+ + + LR RN S DS
Sbjct: 582 FRTGDVVVLYERNHDSDNVTNKMVFKGNIEQITDTELRIR----LRATQRNVSVFPPDSR 637
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ PRFDS S D A+
Sbjct: 638 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRPPRFDS----SFDEAI 686
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K A+DY L++G PGTGKTS + + +S ILL
Sbjct: 687 A------QAGDDFERVALKAQAARDYFLLVGPPGTGKTSRALRRMVEHFYATSSMQILLL 740
Query: 995 SYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S ID++R+G + H L + NS E+ R+
Sbjct: 741 AYTNRAVDEICQSLSSITSGIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNTRMTD 800
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 801 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 860
Query: 1101 GDHYQLPPLVQS----TEARENG--------MEISLFRR-----LSEEHPQAISALQSQY 1143
GDH QLP ++ +E + G ++ SLF R L EE P+AI L Q
Sbjct: 861 GDHKQLPAVILQNSGHSEVHDEGLRKVGLFNLKDSLFERLYRFHLKEESPKAIDMLCRQG 920
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y RL + P E + PV F+ ++
Sbjct: 921 RMHPGVAFFPNKAFYAGRLE----------------ALGLPHQLEHIEA--PVRFIPSEQ 962
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +G+ITPY SQ LIR L
Sbjct: 963 DLESISGK-----TNQYEARIVAGLAREVYLAYEEEFDPNRTLGVITPYRSQIALIRKEL 1017
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD-----WHRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1018 QTLAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1077
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G L+ + + L+ +
Sbjct: 1078 LTRARKQLFITGVPEILNHNSIYQHLLKTI 1107
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 210/444 (47%), Gaps = 67/444 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 447 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 505
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQK-------HCLSAMN-----INS 1040
L K+ ++ VR+ R + +H +I+K L + ++S
Sbjct: 506 LTEKIHKTNLKVVRLCAKSREAIDSPVSFLALHNQIRKMEANTELQKLQQLKDETGELSS 565
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + R L+ V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 566 VDEKRYRMLKKLAEKELLEAADVICCTCVGAGDPRLVRLKFHSILIDESMQATEPECMVP 625
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 626 VVLGVKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 684
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLP 1205
+ Y L G +DE KI PW P RP+ F T
Sbjct: 685 SRFPSNFFYEGSLQNGVCADERKLNKIDF-------PW------PVIDRPMFFHVTQGQE 731
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------H 1256
LN EA + KI +++ ++ + IG+ITPY Q A L++ H
Sbjct: 732 EIAGSGTSYLNR-TEAANVEKIATRFLRSGVKPEQIGVITPYEGQRAYLVQYMQYQGSLH 790
Query: 1257 SLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
S + +EI ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I
Sbjct: 791 SKTYQEIEIASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGII 847
Query: 1317 MVGSCRTLSKVPLLKLLINKVGEQ 1340
+VG+ + LSK PL L++ EQ
Sbjct: 848 IVGNPKVLSKQPLWNHLLSFYKEQ 871
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 207/438 (47%), Gaps = 66/438 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G ++L+ + +N+AVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQ 510
Query: 1004 LLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHCLSAMNINS 1040
L K+ ++ VR+ H + K++Q+ ++S
Sbjct: 511 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSS 570
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E + R L+ V+ TC+G + L+ KF ++DE+ Q+T P + P
Sbjct: 571 ADEKRYRSLKRASENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVP 630
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 631 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 689
Query: 1150 MELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ + Y L C D ++K+ PW + P RP+ F+ T
Sbjct: 690 SQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFFLVTQGQEE 736
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HS 1257
LN EA + KIT +K I+ + IGIITPY Q A L++ HS
Sbjct: 737 IAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHS 795
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+EI ++D +QGR+KD I++S VRS+E L D R+NVALTRAK +I+
Sbjct: 796 RLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALTRAKFGIII 852
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG+ + L+K L L+N
Sbjct: 853 VGNPKVLAKQQLWNHLLN 870
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 137/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 469 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCA 528
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 529 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 588
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 589 DETGELSSADEKRYRSLKRATENQLLEAADVICCTCVGAGDVRLSRIKFTSILIDESMQS 648
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 649 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 707
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 708 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PDRPMFF 754
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 755 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 813
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 814 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 870
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + LSK L L+N
Sbjct: 871 RAKYGIIIVGNPKVLSKQQLWNHLLN 896
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 207/438 (47%), Gaps = 66/438 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G ++L+ + +N+AVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQ 510
Query: 1004 LLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHCLSAMNINS 1040
L K+ ++ VR+ H + K++Q+ ++S
Sbjct: 511 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSS 570
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E + R L+ V+ TC+G + L+ KF ++DE+ Q+T P + P
Sbjct: 571 ADEKRYRSLKRASENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVP 630
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 631 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 689
Query: 1150 MELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ + Y L C D ++K+ PW + P RP+ F+ T
Sbjct: 690 SQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFFLVTQGQEE 736
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HS 1257
LN EA + KIT +K I+ + IGIITPY Q A L++ HS
Sbjct: 737 IAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHS 795
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+EI ++D +QGR+KD I++S VRS+E L D R+NVALTRAK +I+
Sbjct: 796 RLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALTRAKFGIII 852
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG+ + L+K L L+N
Sbjct: 853 VGNPKVLAKQQLWNHLLN 870
>gi|427385832|ref|ZP_18882139.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
gi|425726871|gb|EKU89734.1| hypothetical protein HMPREF9447_03172 [Bacteroides oleiciplenus YIT
12058]
Length = 629
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 207/458 (45%), Gaps = 80/458 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL ++D +++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 189 LNSTQETAVNKVLCSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIGRHEVVH---------KEIQKH-----------CLSAMN------- 1037
KL + ++ +RIG V+ + + H + MN
Sbjct: 249 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFESHPSYTELWGIRKAMREMNGRRRGSY 308
Query: 1038 ------INSVEEIKKR------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
N + ++ R D V+A T + + +L ++F +DEA
Sbjct: 309 EERESARNRLSRLRDRATQLEIQINADLFDSAHVIASTLVSSNHRVLNGRRFGTLFIDEA 368
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q + A + VL GDH QLP ++ EA G+E +L R+ P +S L
Sbjct: 369 AQALEAACWIAIRKADRIVLAGDHCQLPATIKCYEAARAGLEHTLMERIVTTKPTVVSLL 428
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFV 1199
+ QYRM + IM + Y +L + EI + I L+ P+ ++
Sbjct: 429 KIQYRMNEAIMHFPSQWFYDGQLEA-APEIRHRGI---------------LDWDTPITWI 472
Query: 1200 NTDMLPAYEAKDHQTLN--NPVEACLIAK----ITQELVKNEI--EGKDIGIITPYNSQA 1251
+T + E +T N EA L+ K Q + + I E D GII+PY +Q
Sbjct: 473 DTSEMEFKEEFVGETFGRINREEAHLLLKELEAYIQRIGGHRILDERIDFGIISPYKAQV 532
Query: 1252 NLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+R+ + S+ + ++T+D +QG+++D + +S VR++E + L D R
Sbjct: 533 QYLRNKIKTSAALRPYRSLLTVNTVDGFQGQERDVVFISLVRANEEGQ---IGFLNDLRR 589
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
+NVA+TRA+ KL+++G TL LI + E S
Sbjct: 590 MNVAITRARMKLVILGEANTLKHHKFYHKLIEYINEIS 627
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 57 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 113
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 114 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 173
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 174 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 219
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 220 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 279
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 280 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 338
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 339 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 398
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 399 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 451
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 452 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 507
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 508 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 564
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 565 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 605
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 152/487 (31%), Positives = 228/487 (46%), Gaps = 74/487 (15%)
Query: 909 SSQLRRMIV--DLEAPRFD-SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALI 965
S ++R I+ D EAP D S P L LN Q A+ +VLT + +LI
Sbjct: 141 SHAIQRTILGHDYEAPPLDISYPNHYSAPGLP------ELNHSQVMAVREVLT-RSISLI 193
Query: 966 LGMPGTGKTST----MVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVR---- 1017
G PGTGKT T + H KA RG IL+ S +N A+D L K+ + +R
Sbjct: 194 QGPPGTGKTVTSASIVYHLAKA---RGTPILVCSPSNVAIDQLAEKISRTGLRVIRTCAK 250
Query: 1018 -----------IGRHEVVHKEIQKHCLSAM--------NINSVEE----------IKKRL 1048
+ H+ V + ++K L + ++ VEE ++ L
Sbjct: 251 SREKIDSPVGFLTLHQQVRRLVEKEELGKLLQVKEETGELSPVEENRFSSLKLKYERELL 310
Query: 1049 DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVGDHYQLP 1107
+ V+ TC+ + L KF ++DE+ Q P L P++ A + VLVGDH QL
Sbjct: 311 KKADVICCTCVAAGDSRLAAIKFRAVLIDESTQAKEPECLIPIVTGARQVVLVGDHCQLG 370
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSD 1167
P+V EA G+ SLF RL Q I LQ QYRM + L + L Y L G
Sbjct: 371 PVVICEEAARAGLNRSLFERLVILGNQPIR-LQVQYRMHPLLSLLPSNLFYEGTLQNGVT 429
Query: 1168 EIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKI 1227
E ++ D W NP P+ F T + + + ++ N EA I KI
Sbjct: 430 E-QERILEAGDFR----W----PNPTVPMFFWCT-LSQEEKPRSGKSFLNRAEAAHIEKI 479
Query: 1228 TQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLS--------VSSVEIHTIDKYQGRDKDC 1278
+ +++ + IGIITPY +Q A++++H L +E+ ++D +QGR+KD
Sbjct: 480 ATKFLRSGVRADQIGIITPYEAQRAHIVKHMLHSGPLNNKLYQEIEVASVDAFQGREKDI 539
Query: 1279 ILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVG 1338
IL+S VRS+++ + L D R+NVALTRA+ LI+VG+ + LS P+ L+
Sbjct: 540 ILLSCVRSNKDNK---IGFLNDSRRLNVALTRARYGLIIVGNPKVLSHQPMWNSLLRFCR 596
Query: 1339 EQSGILN 1345
E +L+
Sbjct: 597 ENHCLLH 603
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 233 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 289
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 290 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 349
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 350 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 395
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 396 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 455
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 456 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 514
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 515 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 574
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 575 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 627
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 628 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 683
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 684 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 740
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 741 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 781
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 205/441 (46%), Gaps = 59/441 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L G +L+ + +N AVD
Sbjct: 352 LNHSQLHAVKSVLQ-QPLSLIQGPPGTGKTVTSAAIVYHLAHSGTGQVLVAAPSNVAVDQ 410
Query: 1004 LLIKLKSQSIDFVRIG-----------RHEVVHKEIQKHCL--------------SAMNI 1038
L K+ + VR+ H +H ++ L +N
Sbjct: 411 LAHKMDQTGLKVVRLCAKTREAVASPVEHLTLHYQVHGCVLVGRLRKLLALRGAQGGLNA 470
Query: 1039 NSVEEIK--------KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ +E+K + L+ VV TC+G +P L+ +F ++DE+ Q P L P
Sbjct: 471 SDEKELKSLRRRLEMEVLENADVVCTTCVGAGDPRLSHFRFQHVLIDESTQAAEPECLIP 530
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P++ +A E G+ SLF RL + I LQ QYRM +
Sbjct: 531 MVLGAKQVILVGDHCQLGPVIMCKKAAEAGLCQSLFERLRLLGVKPIR-LQVQYRMHPCL 589
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
E + Y L G+ + ++ D PW NP +P++F A
Sbjct: 590 SEFPSNTFYEGTLQNGTG-MGERRLAGVDF----PW----PNPDKPMMFWVQLGAEEISA 640
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-----ANLIRHSLS----V 1260
LN EA + K+ ++N + IG+ITPY Q + ++R+ +
Sbjct: 641 SSTSYLNR-TEAAAVEKVVTRFLQNGMSPAQIGVITPYEGQRAHVVSVMVRNGTARQDLY 699
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+E+ ++D +QGR+KD I++S VRS+E + + L D R+NVALTRA+ L+++G+
Sbjct: 700 KEIEVSSVDAFQGREKDIIVLSCVRSNE---HSSIGFLSDPRRLNVALTRARFGLVVLGN 756
Query: 1321 CRTLSKVPLLKLLINKVGEQS 1341
R LS+ PL L+ E
Sbjct: 757 PRVLSRQPLWNSLLQYFKEHG 777
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 163/581 (28%), Positives = 252/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 56 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 112
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 113 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 172
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ + LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 173 TAQGL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 218
Query: 985 LMRG-ASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+G +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 219 ARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMD 278
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 279 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 337
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 338 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 397
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 398 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 450
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 451 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 506
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 507 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 563
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+N EQ
Sbjct: 564 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQ 604
>gi|19075869|ref|NP_588369.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74676175|sp|O94247.1|HCS1_SCHPO RecName: Full=DNA polymerase alpha-associated DNA helicase A
gi|4239673|emb|CAA20863.1| DNA polymerase alpha-associated DNA helicase A (predicted)
[Schizosaccharomyces pombe]
Length = 660
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 205/441 (46%), Gaps = 76/441 (17%)
Query: 943 KSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
K LN Q++A+ + K+ +LI G PGTGKT T+V ++ L++R IL+ +N AVD
Sbjct: 208 KELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQLVLRNKRILVCGASNLAVD 267
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKH------------------------CLSAM-- 1036
N++ +L S I VR+G + I H CLS +
Sbjct: 268 NIVDRLSSSGIPMVRLGHPARLLPSILDHSLDVLSRTGDNGDVIRGISEDIDVCLSKITK 327
Query: 1037 --NINSVEEIKKRLDQV-------------------KVVAVTCLGITNPLLTDKKFDVCI 1075
N EI K + ++ KVV T G + L ++FD I
Sbjct: 328 TKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVFCTLHGAGSRQLKGQRFDAVI 387
Query: 1076 MDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQA 1135
+DEA Q P PL+ +K +L GDH QL P VQS IS+F RL +
Sbjct: 388 IDEASQALEPQCWIPLLGMNKVILAGDHMQLSPNVQSKRPY-----ISMFERLVKSQGDL 442
Query: 1136 ISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR 1194
+ L QYRM + I + + Y +L ++E+ K + DL + ++E
Sbjct: 443 VKCFLNIQYRMHELISKFPSDTFYDSKL-VPAEEV--KKRLLMDLEN----VEETELTDS 495
Query: 1195 PVIFVNTDMLPAYEAKD---------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIIT 1245
P+ F +T L Y+ D + +N EA +++ L++ +E KDI ++T
Sbjct: 496 PIYFYDT--LGNYQEDDRSEDMQNFYQDSKSNHWEAQIVSYHISGLLEAGLEAKDIAVVT 553
Query: 1246 PYNSQANLIRHSLSVSSVEIH--TIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
PYN+Q LIR L +E+ ++DK QGR+K+ I+ S VRS++ L + R
Sbjct: 554 PYNAQVALIRQLLKEKGIEVEMGSVDKVQGREKEAIIFSLVRSNDVRE---VGFLAEKRR 610
Query: 1304 INVALTRAKKKLIMVGSCRTL 1324
+NVA+TR K+ L ++G T+
Sbjct: 611 LNVAITRPKRHLCVIGDSNTV 631
>gi|332663236|ref|YP_004446024.1| DEAD/DEAH box helicase [Haliscomenobacter hydrossis DSM 1100]
gi|332332050|gb|AEE49151.1| DEAD-like helicase [Haliscomenobacter hydrossis DSM 1100]
Length = 1124
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 246/967 (25%), Positives = 403/967 (41%), Gaps = 162/967 (16%)
Query: 445 LIVHPDVLVSGTRVAASF----SCPRRSVLDERLKCSERSISALLGTLLHQIFQAGLMKE 500
+V PD L+ T +A F + P +L + L S S SALL + F LM
Sbjct: 219 FVVEPDHLIDVTGIAECFDTDHTVPETYLLKKFLPFS--SSSALLLGHIANFFLDELMHN 276
Query: 501 IPTMKFLEEYARLVLQKNIESLYACGVNENDIHKTLVEAIPKMLNWIILFKDSQDLNTPT 560
P +F E + ++ + L C + + ++ + +N L
Sbjct: 277 -PQQEFPEVFKKVF---ALNPLAFCLLEDRELIDLRQRSQAHFIN----------LQREI 322
Query: 561 V-DFGSDGLKKLKISEVTDIEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFK 619
V +F + G+ E +E ++ +GL+G +DA R ++ I +E K
Sbjct: 323 VQNFPAQGID----PEQCYLEPTFYSNIHGLQGRLDALYR---HGNKSAI------VELK 369
Query: 620 TGKI--PNG-QSSMEHRAQVILYTLLMSERYLKHID--SGLLY-YLQSDQTQGVMVQRSD 673
+GK+ PN + + H Q +LY L++ Y K ID + +LY L++D + V RS+
Sbjct: 370 SGKLFKPNQFKINTGHYIQTLLYDLIIRATYGKEIDPTNYILYSALETDNLKFAPVNRSN 429
Query: 674 LVGLIMRRNEFANDIIKASTTQQLPPMLRAYGGNKE------CSGLGNMFDSHIYHLTTA 727
+ RN + T Q+L GN E L N+ + + +
Sbjct: 430 QWEALQVRNHI---LALEHTLQRL-----GLPGNDEDNLVEHTQRLQNLLADYRFQSASR 481
Query: 728 HCS-----FLRHWDRLIDLEAKEMQ-----VVKNEIWCSRGSGGNHFTGCLSSIVLDASN 777
F R + L D+E + + G G +++ L+ +
Sbjct: 482 FAQRDQEQFQRVFSALNDIEQAYFTAFTGFIAREHKLSKTGLDGIETINGQAALWLNPFH 541
Query: 778 EHQKSY-------------RDNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTL 824
E Q+ + R N + F R +P N GD I P + D
Sbjct: 542 EKQERFEILSHLTIVDNQARANEAIIRFARSEHTNPLANFRTGD--IAVLYPFVNEDQ-- 597
Query: 825 RSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRID 884
S ++L S I E+S V+VS LR N D + W ++
Sbjct: 598 --------SPLRNQLFKCS--IIELSASTVTVS----LRSRQFNDQIFQD---YTWWNLE 640
Query: 885 KDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKS 944
D + SF+ L L ++ S+ RR+++ + AP S PA
Sbjct: 641 HDLMDNSFTAQYRGLYDL---ASSSTHKRRLLLGVTAPAMPLELGQSSSPA--------E 689
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGA--SILLTSYTNSAVD 1002
+ +Q+ +L ++DY L+ G PGTGKTS M+ + M + +ILL +YTN AVD
Sbjct: 690 MTAEQQAIFQAILASQDYFLLWGPPGTGKTSVMLKHLVGHWMDHSKDTILLLAYTNRAVD 749
Query: 1003 NLLIKLKSQSID----FVRIGRHEVVHKEIQKHCLSAMN--INSVEEIKKRLDQVKVVAV 1056
+ +++ + + ++RIG Q LS ++ I++ +E+K + ++V
Sbjct: 750 EICESIEAYAPEMRNRYIRIGSRYSTAPAYQGRLLSILSQRIDTRKELKALISGHRIVVA 809
Query: 1057 TCLGITN--PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS-- 1112
T I L K FD ++DEA Q P+ +G L F+L+GDH QLP +V
Sbjct: 810 TVASIIGRPELFLLKAFDRVVIDEASQILEPMLVGLLPKFKHFLLIGDHKQLPAVVAQDP 869
Query: 1113 -------TEARENG---MEISLFRRL-----SEEHPQAISALQSQYRMCQGIMELSNALI 1157
T E G + S F RL ++ A + L Q RM Q IM +
Sbjct: 870 ELSKVYDTRLHEIGLYDLRNSFFERLYKRTQTQNWHHAYAQLSHQGRMHQEIMTFPSRYF 929
Query: 1158 YGDRLSCGSDEIANAKIKVSDLS----SCSPWLKEALNPCRPVIFVNTDM---LPAYEAK 1210
Y +RL E ++++S L L++AL+ R +IF T + A++A
Sbjct: 930 YEERLRILPPETPGHEVQISILDYPQLEKGSTLEQALSSQR-MIFCATPLDKNGAAHKAN 988
Query: 1211 DHQTLNNPVEACLIAKITQELVKN--EIEGKDIGIITPYNSQANLIRHSL-----SVSSV 1263
H+ + L+AKI N + +GIITPY +Q IR +L V +
Sbjct: 989 RHEA---EMVGELVAKIQALYTHNGRSFTPRSLGIITPYRAQIAQIRQALLQKEIDVDLI 1045
Query: 1264 EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL-----GDWHRINVALTRAKKKLIMV 1318
I T+++YQG +D I++S S N + SL+ G ++NVALTRA+++LI++
Sbjct: 1046 TIDTVERYQGGARDIIIISL---STNTASQFRSLISLSEEGVDRKLNVALTRAREQLIIL 1102
Query: 1319 GSCRTLS 1325
G+ LS
Sbjct: 1103 GNGDLLS 1109
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 156 bits (394), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 211/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTS 995
++S +L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 113 LFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCA 172
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 173 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRSMETNTELKKLQQLK 232
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 233 DETGELSSADEKRYRNLKRGTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQS 292
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 293 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 351
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 352 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 398
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K ++ + IGIITPY Q A L++
Sbjct: 399 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYM 457
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 458 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 514
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 515 RAKYGIIIVGNPKVLAKQQLWNHLLN 540
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 211/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTS 995
++S +L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 443 LFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCA 502
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 503 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRSMETNTELKKLQQLK 562
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 563 DETGELSSADEKRYRNLKRGTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQS 622
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 623 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 681
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 682 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 728
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K ++ + IGIITPY Q A L++
Sbjct: 729 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYM 787
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 844
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 845 RAKYGIIIVGNPKVLAKQQLWNHLLN 870
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 141/432 (32%), Positives = 200/432 (46%), Gaps = 64/432 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDN 1003
LN Q +A+ +V LI G PGTGKTST V ++ L S IL+ + +N AVD+
Sbjct: 372 LNYSQEQAL-RVALRNPLTLIQGPPGTGKTSTSVAIIRELHSHVKSRILVCAPSNVAVDH 430
Query: 1004 LLIKLKSQSIDFVR---------------IGRHEVVHKEIQ--------KHCLSAMNI-- 1038
L ++ + VR IG V I K L +M
Sbjct: 431 LAQRVSGTGLKVVRLQAKYRNDIPCSVESIGLERQVGDYINASSGLERLKELLDSMQTGK 490
Query: 1039 -----------NSVEEIKKR-LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPV 1086
+ VE+I++ L VV TC+G + L KF ++DEA Q T P
Sbjct: 491 SLNDKDYGTYKDGVEKIERLILRNADVVCCTCIGAGDYRLKTMKFKHVLIDEATQGTEPE 550
Query: 1087 SLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRM 1145
L PL+ +K +LVGDH QL PLV ST A + G + SLF RL + + L QYRM
Sbjct: 551 VLIPLVRGAKQVILVGDHCQLRPLVFSTAAEKAGYQRSLFERLVLMGHRPVR-LDVQYRM 609
Query: 1146 CQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLP 1205
+ + Y L G + D S PW + +P+ F N
Sbjct: 610 NPSLSFFPSHHYYEGTLQNG------VTAEQRDASEVFPWP----DVTKPIFFYNATGNE 659
Query: 1206 AYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--- 1262
+ LN EA L +I +L++ +E DIG+ITPY SQ +R LS S
Sbjct: 660 ELGSNGRSYLNR-AEAALTEQIVTKLIQGGVEPGDIGVITPYRSQCRYLRSYLSRSGRLP 718
Query: 1263 ------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
VEI ++D +QGR+K+ I++S VRS N R + + D R+NV+LTRAK+ LI
Sbjct: 719 MEVYDRVEISSVDAFQGREKEFIILSCVRS--NHRQ-GAGFVTDGRRLNVSLTRAKRGLI 775
Query: 1317 MVGSCRTLSKVP 1328
++G+ + S+ P
Sbjct: 776 IMGNVQLFSRYP 787
>gi|451845629|gb|EMD58941.1| hypothetical protein COCSADRAFT_261831 [Cochliobolus sativus ND90Pr]
Length = 708
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 213/482 (44%), Gaps = 104/482 (21%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNS 999
W + SLND Q+ AI L +++ ALI G PGTGKT T++ + LL + +L+ +N
Sbjct: 208 WIDPSLNDSQKEAIRFALASREVALIHGPPGTGKTHTLIELILQLLKQKLRLLVCGPSNI 267
Query: 1000 AVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQ---- 1050
+VDN++ +L S + VR+G + + H L + S VE+++K +D+
Sbjct: 268 SVDNIVERLASHKVPMVRLGHPARLLPSVLSHSLDVLTRTSEAAALVEDVRKEMDEKQAS 327
Query: 1051 --------------------------------------VKVVAVTCLGITNPLLTDKKFD 1072
KVV T G L ++FD
Sbjct: 328 IRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVTGSKVVLATLHGAGGFHLKGQEFD 387
Query: 1073 VCIMDEAGQTTLPVSLGPLMF--ASKFVLVGDHYQLPPLVQSTEARENG----------- 1119
V I+DEA Q PL++ A+K VL GDH QLPP ++S ++E
Sbjct: 388 VVIVDEASQALEAQCWVPLLWTKANKLVLAGDHLQLPPTIKSLNSKEAKTAKKSKDKKTK 447
Query: 1120 ------------------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGD 1160
+E +LF RL H P L +QYRM + IM + +Y
Sbjct: 448 DAEDNADRSMLKQGEDVTLETTLFDRLLALHGPSIKRMLTTQYRMHEKIMRFPSDELYDS 507
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL----- 1215
+L +A +K L ++E + P++F +T E + + +
Sbjct: 508 KL------VAADFVKARLLKDLKYEVQETEDTTEPLVFWDTQGGDFPEKVEDEGVIGKGG 561
Query: 1216 ---------NNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVE 1264
+N EA L+ + LV ++ +DI ++TPYN+Q L+ L +E
Sbjct: 562 KGMILGDSKSNEAEAALVRMHVRSLVAAGVKPEDIAVVTPYNAQLALLAGMLKEEYPGME 621
Query: 1265 IHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ ++D +QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L ++G T+
Sbjct: 622 LGSVDGFQGREKEAVIVSTVRSNAE---HEVGFLGEKRRLNVAMTRPKRHLCVIGDSETI 678
Query: 1325 SK 1326
SK
Sbjct: 679 SK 680
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 443 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCA 502
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 503 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 562
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 563 DETGELSSADEKRYRSLKRGTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQS 622
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 623 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 681
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 682 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 728
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 729 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 787
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 788 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 844
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 845 RAKYGIIIVGNPKVLAKQQLWNHLLN 870
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 156 bits (394), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 209/438 (47%), Gaps = 66/438 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G ++L+ + +N+AVD
Sbjct: 457 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCAPSNTAVDQ 515
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VH------------KEIQKHCLSAMNINS 1040
L K+ ++ VR+ R + +H K++Q+ ++S
Sbjct: 516 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQISNIKANTELKKLQQLKDETGELSS 575
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E + R L+ V+ TC+G + L+ KF ++DE+ Q+T P + P
Sbjct: 576 ADEKRYRSLKRSTENQLLEAADVICCTCVGAGDGRLSRIKFTSILIDESMQSTEPECMVP 635
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 636 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 694
Query: 1150 MELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ + Y L C D ++K+ PW + P RP+ F+ T
Sbjct: 695 SQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFFLVTQGQEE 741
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HS 1257
LN EA + KIT +K ++ + IGIITPY Q A L++ HS
Sbjct: 742 IAGSGTSFLNR-TEAANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQYMQYQGSLHS 800
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+EI ++D +QGR+KD I++S VRS+E L D R+NVALTRAK +I+
Sbjct: 801 RLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALTRAKYGIII 857
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG+ + LSK L L+N
Sbjct: 858 VGNPKVLSKQQLWNHLLN 875
>gi|189463893|ref|ZP_03012678.1| hypothetical protein BACINT_00227 [Bacteroides intestinalis DSM
17393]
gi|189438466|gb|EDV07451.1| putative DNA helicase [Bacteroides intestinalis DSM 17393]
Length = 629
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 205/459 (44%), Gaps = 82/459 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN Q A+ KVL ++D +++ G PGTGKT+T+V A+ L R +L+ + +N+AVD +
Sbjct: 189 LNSTQENAVNKVLYSRDVSIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWI 248
Query: 1005 LIKLKSQSIDFVRIG----------------RHE---------VVHKEIQ----KHCLSA 1035
KL + ++ +RIG R E + K I+ KH S
Sbjct: 249 SEKLVDRGVNVLRIGNPTRVNDKMLSFTYERRFEGHPAYSELWSIRKAIREMGGKHRGSY 308
Query: 1036 MNINSVEEIKKRL----------------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEA 1079
S RL D V+ T + + +L +F +DEA
Sbjct: 309 EERESARNRMSRLRDRATQLEIQINADLFDNAHVITSTLVSSNHRILNGHRFGTLFIDEA 368
Query: 1080 GQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISAL 1139
Q + A + VL GDH QLPP ++ EA G+E +L R+ P +S L
Sbjct: 369 AQALEAACWIAIRKADRVVLAGDHCQLPPTIKCYEAARGGLESTLMERVVANKPSTVSLL 428
Query: 1140 QSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFV 1199
+ QYRM + IM+ + Y L A +I+ + L+ P+ ++
Sbjct: 429 KVQYRMHEEIMKFPSQWFYNGELE------AAPEIRYRGI----------LDWDTPISWI 472
Query: 1200 NTDMLPAYEAKDHQTLN--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQ 1250
+T + E +T N EA L+ + + + N I GK D GII+PY +Q
Sbjct: 473 DTSEMDFKEEFVGETFGRINKAEADLLLQELKVYI-NRIGGKRVLEERIDFGIISPYKAQ 531
Query: 1251 ANLIRHSLSVSS--------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
+R+ + S + ++T+D +QG+++D I +S VR++E + L D
Sbjct: 532 VQYLRNKIKASGSLKPYRSLLTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLR 588
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQS 1341
R+NVA+TRA+ KL+++G TL LI + + S
Sbjct: 589 RMNVAITRARMKLVILGEVNTLKHHKFYHKLIEHIQQIS 627
>gi|390356226|ref|XP_003728733.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2-like
[Strongylocentrotus purpuratus]
Length = 1100
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 221/459 (48%), Gaps = 78/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
+LN+ QR A+ L ++ A+I G PGTGKT+T+V ++ + + IL + +N AVDN
Sbjct: 200 NLNESQRDAVTFALCQREVAVIHGPPGTGKTTTVVEVIQQAVKQNMKILACAASNVAVDN 259
Query: 1004 LLIKLKSQ-SIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLD----QVK- 1052
LL +L + S VR+G + IQ+ L A+ +S V +I++ LD Q++
Sbjct: 260 LLERLSANASCSMVRLGHPARLLPSIQRFALDAILASSDGASIVRDIRRDLDTTLSQIRK 319
Query: 1053 --------------------------------------VVAVTCLGITN-PL--LTDKKF 1071
V+A TN PL L F
Sbjct: 320 TKDKDEKHRLKDEMKYLRKDLKSREQKAIQDILMAADVVLATNTSASTNGPLRALQQGHF 379
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTE---------ARENGMEI 1122
D+ ++DE Q+ PL+ A K +L GDH+QLP + S + A + G+
Sbjct: 380 DLVVIDECAQSLEAACWIPLLNARKCLLAGDHHQLPATIMSKQXKXKETCFTAAKEGLAT 439
Query: 1123 SLFRRLSEEHP-QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSS 1181
S+ R+ + + + + L +QYRM IM S+ +Y +L +A +K D+
Sbjct: 440 SMMERIIDLYGNRVVQMLTTQYRMNDEIMRWSSDQLYDGKLQ-SHQSVATHLLK--DM-- 494
Query: 1182 CSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEG 1238
P + E N P++ ++T D+L E +D + N EA +++ L+ + +
Sbjct: 495 --PCIMENENTTLPLLLIDTAGCDVL-ELELEDEVSKGNEGEADIVSHHVSNLISSGLSP 551
Query: 1239 KDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSS 1296
I +I PYN Q +L+R LS +EI ++D +QGR+K+ +++S VRS++
Sbjct: 552 AKIAVIAPYNLQVDLLRLRLSSKYPGLEIKSVDGFQGREKEAVVISLVRSNDRGE---VG 608
Query: 1297 LLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
L + RINVA+TRA++ L +V +T+ K P LK L++
Sbjct: 609 FLKEDRRINVAITRARRHLAVVCDSQTVGKHPFLKSLVD 647
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 156 bits (394), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 207/438 (47%), Gaps = 66/438 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L+ + G ++L+ + +N+AVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQ 510
Query: 1004 LLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHCLSAMNINS 1040
L K+ ++ VR+ H + K++Q+ ++S
Sbjct: 511 LTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLKDETGELSS 570
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E + R L+ V+ TC+G + L+ KF ++DE+ Q+T P + P
Sbjct: 571 ADEKRYRNLKRAAENQLLEAADVICCTCVGAGDGRLSRVKFTSILIDESMQSTEPECMVP 630
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 631 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPEL 689
Query: 1150 MELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ + Y L C D ++K+ PW + P RP+ F+ T
Sbjct: 690 SQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFFLVTQGQEE 736
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HS 1257
LN EA + KIT +K I+ + IGIITPY Q A L++ HS
Sbjct: 737 IAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYMQYQGSLHS 795
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+EI ++D +QGR+KD I++S VRS+E L D R+NVALTRAK +I+
Sbjct: 796 RLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALTRAKFGIII 852
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG+ + L+K L L+N
Sbjct: 853 VGNPKVLAKQQLWNHLLN 870
>gi|404484956|ref|ZP_11020160.1| hypothetical protein HMPREF9448_00569 [Barnesiella intestinihominis
YIT 11860]
gi|404339961|gb|EJZ66392.1| hypothetical protein HMPREF9448_00569 [Barnesiella intestinihominis
YIT 11860]
Length = 996
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 159/565 (28%), Positives = 258/565 (45%), Gaps = 79/565 (13%)
Query: 824 LRSGDYVIL---STESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSL-LHE 879
R GD V+ T++DR++ ++ + ++ + + L R++ S A++L +
Sbjct: 450 FRLGDIVLFYVCDTDADRVST-----RQVFKATIASMTADRVVLRLRDNQSYAEALPIAS 504
Query: 880 VWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYI 939
+ ++ D + +SF + L + +S RR ++ EA V + LSY
Sbjct: 505 CYAVEHDYVDSSFLLQYKGLYTML----DASPHRRGLLVGEA---GESPVRNMSRRLSYE 557
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAV--KALLMRGASILLTSYT 997
+ L+ R ++K L A+DY L++G PGTGKTS + + + L + ILL ++T
Sbjct: 558 YDSPDLS----RILLKALQAEDYFLLVGPPGTGKTSVALRNMVREFLAIPDYQILLVAFT 613
Query: 998 NSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLDQVKV 1053
N AVD + KL++ + D++R+G+ + H LS + EE + + +V
Sbjct: 614 NRAVDEICDKLETIGEVDDYIRVGQTLSCDVAYRSHLLSERMKQCRNREEANRSIHSCRV 673
Query: 1054 VAVTCLGITNP--LLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS--------KFVLVGDH 1103
T ++ L K+FDV I+DEA Q P +G L + KF+L+GDH
Sbjct: 674 FVATLSSLSGKMELFNLKRFDVAIVDEASQILEPQLVGLLSAKTPTGRDAIGKFILIGDH 733
Query: 1104 YQLPP-LVQSTEA--------RENGM---EISLFRRLSEEHPQA---ISALQSQYRMCQG 1148
QLP +VQS E R G ISLF RL P+ L Q+RM
Sbjct: 734 KQLPAVVVQSAEESVITDERLRSAGFVDCRISLFERLYRRLPEGSPFADMLDCQWRMHPD 793
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN-TDMLPAY 1207
I +N Y L G NA ++S L P+ + VI T P
Sbjct: 794 IASFANTYFYKGALRDG-----NAPHQISLL----PFTNMGDDKWERVIATKRTAFFPTK 844
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVK------NEIEGKDIGIITPYNSQANLIRHSL--- 1258
+ NN EAC A I L + E + + +GIITPY Q IR L
Sbjct: 845 TLCAGKKYNNE-EACKTAAIVNALYRLYERNGLEFDERSVGIITPYRHQIARIRQELDKF 903
Query: 1259 ---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW-----HRINVALTR 1310
+ ++ + T++++QG DCI+ SF + E+ S + ++NVALTR
Sbjct: 904 GISAFDAIRVDTVERFQGSQNDCIIYSFCVNDESQLEWLPSYTEESGQLIDRKLNVALTR 963
Query: 1311 AKKKLIMVGSCRTLSKVPLLKLLIN 1335
A+++L ++G+ R LS+ P+ ++LI
Sbjct: 964 ARRQLFVLGNSRLLSRNPIYRILIT 988
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Bombus
impatiens]
Length = 1119
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 455 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 513
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 514 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 573
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 574 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 633
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 634 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 692
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 693 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 741
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 742 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 800
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 801 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 857
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 858 GNPKVLSKQPLWNHLLSFYKEQ 879
>gi|327401287|ref|YP_004342126.1| AAA ATPase [Archaeoglobus veneficus SNP6]
gi|327316795|gb|AEA47411.1| AAA ATPase [Archaeoglobus veneficus SNP6]
Length = 544
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 207/411 (50%), Gaps = 62/411 (15%)
Query: 943 KSLNDDQRRAIIKVLTAKD--YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
+ L++ Q A++ L +D L++G PGTGKT+ + A K G+ +L+TS+TN A
Sbjct: 132 EGLDEWQSSAVLTSLELEDNEVLLVVGPPGTGKTTFISKAAKLASSSGSRVLITSHTNRA 191
Query: 1001 VDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVE------------------ 1042
VDN++ + + VR+G + + K L M +VE
Sbjct: 192 VDNVIERQEKA----VRVGNPSKLSPAVLKFSLERMASKAVEDEENASDAEELAELTARK 247
Query: 1043 ------EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
E+ + ++ +V T + + D+ FD+ +DEA Q + +L + K
Sbjct: 248 ARKIEREMLRIVNDAVIVGATLIKCALFPMADQDFDIVFIDEASQALISAALLGMERGRK 307
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNAL 1156
+VLVGD YQLPP V ST+A S F + +AI L++ YR I+
Sbjct: 308 YVLVGDPYQLPP-VLSTDAS----AYSAFNFFHDWARRAI-WLRNHYRSNSEIIGFVAKH 361
Query: 1157 IYGDRL----SCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDH 1212
+YG R+ SC N K+++ + E ++P RP++FV+ E K
Sbjct: 362 VYGHRIRPHESC-----KNVKLEIIPEGKFA----EIIDPGRPIVFVSA--CGREEGKGS 410
Query: 1213 QTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR---HSLSVSSVEIHTID 1269
+ N VEA ++ +I +ELV N + +DIGIITPY Q LI + + +++VE++T+D
Sbjct: 411 KL--NEVEARVVVEICRELVSNGVNVEDIGIITPYVRQRKLISEMINRIGLNTVEVNTVD 468
Query: 1270 KYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+QGR+KD I+ S + ++ R + D+ R NVALTRA+KK I++G+
Sbjct: 469 AFQGREKDVIIFS-TTAVKDLRFAS-----DFRRFNVALTRARKKFIVIGN 513
>gi|398345459|ref|ZP_10530162.1| DNA and RNA helicase [Leptospira inadai serovar Lyme str. 10]
Length = 627
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 131/454 (28%), Positives = 198/454 (43%), Gaps = 76/454 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LND QRRAI +L +D L+ G PGTGKT T+ A++ L+ RG IL ++ TN+A D L
Sbjct: 175 LNDSQRRAISAILQTEDLILLHGPPGTGKTKTITEAIRILVDRGKKILASAPTNAATDLL 234
Query: 1005 LIKLKSQSIDFVRIG-------------------RH------EVVHKEIQKHCLSAMNIN 1039
L + +RIG RH E KEI + A
Sbjct: 235 AESLGRMGVSALRIGHPARMSESVLSVSLDANLNRHPDFKLIERDKKEIGELLKKAGKYK 294
Query: 1040 SV-----EEIKKRLDQVK-----------------------VVAVTCLGITNPLLTDKKF 1071
E +KRL Q V+ T G ++ LL F
Sbjct: 295 RTFGREEAEDRKRLYQEAKELRKGIRERQKILVRYLLESHPVIVCTHTGASSSLLDKLNF 354
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL--S 1129
D ++DE Q T P S P++ A + V+ GD QLPP V S + ++I L RL S
Sbjct: 355 DYAVLDEGSQATEPASWIPILRAERIVIAGDPRQLPPTVLSEDPL---LKIPLMERLLDS 411
Query: 1130 EEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEA 1189
+ + L +QYRM I N Y RL G E ++ S +P+ E
Sbjct: 412 MDSIGRVYLLDTQYRMTDPIQSFPNRRFYAGRLVSGIPE---------EIRSANPFPSET 462
Query: 1190 LNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNS 1249
+F++T + E +L N EA I + ++++ +D+ +I+PY
Sbjct: 463 PLFGSSFVFIDTSGTDSGEELFDASLGNRWEAEFTITILKRILESGWLPEDLVLISPYRY 522
Query: 1250 Q----ANLIRHSLSV--SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
Q ++R L + ++EI T+D +QGR+K ++ S VRS+ L + R
Sbjct: 523 QRFLLEEILRKELPIVGETIEIETVDSFQGREKKGVIFSLVRSNS---EGNIGFLSEERR 579
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
NV +TRAK+ L+++G TL + + LI +
Sbjct: 580 WNVGMTRAKRLLVLIGDGSTLGEQEFFQDLIQEA 613
>gi|356536591|ref|XP_003536820.1| PREDICTED: DNA-binding protein SMUBP-2-like [Glycine max]
Length = 949
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 255/589 (43%), Gaps = 85/589 (14%)
Query: 823 TLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWR 882
TL GD V + T A+ + I +S + L R+ L + R
Sbjct: 343 TLSPGDMVCVRTYDSMGAITTSCIQGFVNSFGDDGYSITVALESRHGDPTFSKLFGKSVR 402
Query: 883 IDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGS-VFSQDPALSYIWS 941
ID+ + + N L L + + + + A F G V + W+
Sbjct: 403 IDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNHLADWA 462
Query: 942 EKSLN---------DDQRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKALLMRGASI 991
E+ L+ D Q RAI L K L++ G PGTGKT + + + +G +
Sbjct: 463 EEKLDGRLGNETFDDSQWRAIAMGLNKKRPVLVIQGPPGTGKTGLLKQLIACAVQQGERV 522
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGR-------------HEVVHKEIQ--------- 1029
L+T+ TN+AVDN++ KL + ++ VR+G E+V+ ++
Sbjct: 523 LVTAPTNAAVDNMVEKLSNVGLNIVRVGNPARISKTVGSKSLEEIVNAKLASFREEYERK 582
Query: 1030 --------KHCLSAMNINS-VEEIKKRLDQ----------------VKVVAVTCLGITNP 1064
+HCL ++ S + ++ K+L + +VV T G +P
Sbjct: 583 KSDLRKDLRHCLRDDSLASGIRQLLKQLGRSLKKKEKQTVIEVLSSAQVVVATNTGAADP 642
Query: 1065 LLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
L+ FD+ ++DEAGQ P P++ + +L GD QL P++ S +A E G+ IS
Sbjct: 643 LVRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEVGLGIS 702
Query: 1124 LFRRLSEEHPQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC 1182
L R + H ++ L +QYRM I ++ +YG L +++ S L
Sbjct: 703 LLERAATLHEGILTTRLTTQYRMNDAIASWASKEMYGGLLK-------SSETVFSHLLVD 755
Query: 1183 SPWLKEALNPCRPVIFVNTDMLP----AYEAKDH------QTLNNPVEACLIAKITQELV 1232
SP++K P++ ++T M P + ++H +L N EA ++ + L+
Sbjct: 756 SPFVKPTWITQCPLLLLDTRM-PYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLI 814
Query: 1233 KNEIEGKDIGIITPYNSQANLIRHSL----SVSSVEIHTIDKYQGRDKDCILVSFVRSSE 1288
+ I + +PY +Q L+R L + E+ TID +QGR+ D +++S VRS+
Sbjct: 815 YAGVSPTAIAVQSPYVAQVQLLRDKLDEFPEAAGTEVATIDSFQGREADAVILSMVRSNT 874
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LGD RINVA+TRA+K L +V T+ L L+ +
Sbjct: 875 LG---AVGFLGDSRRINVAITRARKHLALVCDSSTICHNTFLARLLRHI 920
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1 [Bombus
terrestris]
Length = 1119
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 455 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 513
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 514 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 573
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 574 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 633
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 634 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 692
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 693 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 741
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 742 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 800
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 801 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 857
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 858 GNPKVLSKQPLWNHLLSFYKEQ 879
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 455 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 513
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 514 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 573
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 574 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 633
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 634 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 692
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 693 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 741
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 742 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 800
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 801 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 857
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 858 GNPKVLSKQPLWNHLLSFYKEQ 879
>gi|270295956|ref|ZP_06202156.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273360|gb|EFA19222.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 637
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 145/565 (25%), Positives = 247/565 (43%), Gaps = 94/565 (16%)
Query: 842 ASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQ 901
A G IT ++ F +VS++ R+ + A + EV D + F Y +
Sbjct: 101 ADGKITYMN-FTATVSYADETRMVAIMPGAGA---VMEVQETDNLGVQLYFDETSYRTMF 156
Query: 902 LFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKD 961
L+ S+ R+ + S + F + + + W LN Q A+ KVL A+D
Sbjct: 157 EALEDTLRSKGNRLAELRDILLGTSKAGFRELYPVRFPW----LNSTQETAVNKVLCARD 212
Query: 962 YALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRH 1021
A++ G PGTGKT+T+V A+ L R +L+ + +N+AVD + KL + ++ +RIG
Sbjct: 213 VAIVHGPPGTGKTTTLVEAIYETLHREPQVLVCAQSNTAVDWISEKLVDRGVNVLRIGNP 272
Query: 1022 EVVH---------KEIQKHCL---------------SAMNINSVEE---IKKRLDQVK-- 1052
V+ + + H L S S +E ++ R+ +++
Sbjct: 273 TRVNDKMLSFTYERRFENHPLYPELWSIRKNLRELGSRARRGSYDEREGVRSRMSRLRDR 332
Query: 1053 -----------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFAS 1095
V+A T + + LL ++F +DEA Q + A
Sbjct: 333 ATALEIQINSELFDGAHVIASTLVSSNHRLLNGRRFGTLFIDEAAQALEAACWIAIRKAD 392
Query: 1096 KFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNA 1155
+ VL GDH QLPP ++ EA G+E +L ++ P +S L+ QYRM + IM+ +
Sbjct: 393 RVVLAGDHCQLPPTIKCYEAARGGLERTLMEKVVSNKPAVVSLLKVQYRMHEEIMKFPSQ 452
Query: 1156 LIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTL 1215
Y L A +++ + L+ P+ +++T + E +T
Sbjct: 453 WFYNGELE------AAPEVRYRGI----------LDWDTPIHWIDTSEMDFKEEFVGETF 496
Query: 1216 N--NPVEACLIAKITQELVKNEIEGK-------DIGIITPYNSQANLIRHSLSV------ 1260
N EA L+ ++ N I G D GII+PY +Q +R+ +
Sbjct: 497 GRINKAEADLLLS-ELKIYINRISGNRILEEKIDFGIISPYKAQVQYLRNKIKADASLKP 555
Query: 1261 --SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
S ++T+D +QG+++D I +S VR++E + L D R+NVA+TRA+ KL+++
Sbjct: 556 YRSLFTVNTVDGFQGQERDVIFISLVRANEEGQ---IGFLNDLRRMNVAITRARMKLVIM 612
Query: 1319 GSCRTLSKVPLLKLL---INKVGEQ 1340
G TL + L I +G Q
Sbjct: 613 GEADTLKHHGFYRKLLEFIQNIGNQ 637
>gi|119497825|ref|XP_001265670.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
gi|119413834|gb|EAW23773.1| DNA helicase, putative [Neosartorya fischeri NRRL 181]
Length = 713
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 244/559 (43%), Gaps = 121/559 (21%)
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVW-------RIDKDEIMTSFSVMR 896
G++T + + ++F + R G S D D + E+W ++ D +F M
Sbjct: 148 GVVTRVGERSIWIAFGQ--RGGGGRSKED-DEAIEELWGKKLWLIKLAND---VTFRRMN 201
Query: 897 YNLVQLF-LQSAQSSQLRRMIVDLEAPR---FDS-GSVFSQDPALSYIWSEKSLNDDQRR 951
+ ++ + + S R+ AP +D+ G V DP +LND Q+
Sbjct: 202 QTMEKMAKMTDSDYSHFMRVAFGHTAPMQPDYDAIGPVEFVDP---------TLNDSQKE 252
Query: 952 AIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQ 1011
AI L ++D ALI G PGTGKT T++ + ++ R +L+ +N +VDN++ +L
Sbjct: 253 AIRFALASRDVALIHGPPGTGKTHTLIELILQMVKRKLRVLVCGPSNVSVDNIVERLAPN 312
Query: 1012 SIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKRLDQVK-------------- 1052
+ VRIG + + +H L + S V++++K +D+ +
Sbjct: 313 GVPVVRIGHPARLLPSVLEHSLEVLTHTSEAAAIVKDVRKEIDEKQASIRKTRTGRERRA 372
Query: 1053 ----------------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
VV T G L ++KFDV ++DEA Q
Sbjct: 373 IYDDLKELRREFRERESRCVDNLVRESNVVLATLHGAGGHQLKNQKFDVVVIDEASQALE 432
Query: 1085 PVSLGPLMFASKFVLVGDHYQLPPLVQST----------------EARENGMEI------ 1122
PL+ ASK VL GDH QLPP V+S+ +A + EI
Sbjct: 433 AQCWIPLLPASKVVLAGDHLQLPPTVKSSVEKSKNAKKKGKSDTKDASASSAEIIGDFSL 492
Query: 1123 --SLFRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDL 1179
+LF RL H I L +QYRM + IM+ + +Y +L IA +K L
Sbjct: 493 ETTLFDRLLSLHGPGIKRMLTTQYRMHEKIMQFPSNELYESKL------IAAEAVKSRLL 546
Query: 1180 SSCSPWLKEALNPCRPVIFVNT-----------DMLPAYEAKDHQTLNNPVEACLIAKIT 1228
++E + PV+F +T D + EA ++ +N +EA ++AK
Sbjct: 547 KDLPYQVEETDDTREPVVFWDTQGGDFPEKTEDDDVGKKEALLGESKSNEMEALVVAKHV 606
Query: 1229 QELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRS 1286
Q L++ ++ +DI ITPYN Q L+ L +E+ ++D +QGR+K+ ++VS VRS
Sbjct: 607 QNLIQAGVKPEDIACITPYNGQLALLSSMLREKYPGLELGSVDGFQGREKEAVVVSLVRS 666
Query: 1287 SENPRNCTSSLLGDWHRIN 1305
+ LG+ R+N
Sbjct: 667 NSEHE---VGFLGEKRRLN 682
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3 [Bombus
impatiens]
Length = 1108
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 444 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 502
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 503 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 562
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 563 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 622
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 623 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 681
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 682 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 730
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 731 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 789
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 790 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 846
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 847 GNPKVLSKQPLWNHLLSFYKEQ 868
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Bombus
impatiens]
Length = 1106
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 210/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 434 FSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 493
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 494 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 553
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 554 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 613
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 614 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 672
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 673 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 721
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KI ++ ++ + IG+ITPY Q A L++
Sbjct: 722 TQGQEEIAGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 837
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 838 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 866
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3 [Bombus
terrestris]
Length = 1106
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 210/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 434 FSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 493
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 494 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 553
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 554 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 613
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 614 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 672
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 673 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 721
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KI ++ ++ + IG+ITPY Q A L++
Sbjct: 722 TQGQEEIAGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 837
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 838 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 866
>gi|159905473|ref|YP_001549135.1| putative DNA helicase [Methanococcus maripaludis C6]
gi|159886966|gb|ABX01903.1| DNA helicase [Methanococcus maripaludis C6]
Length = 633
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 156/279 (55%), Gaps = 27/279 (9%)
Query: 1053 VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQS 1112
VV T + +L D +FDVC +DE Q+ P SL P++ + K ++ GDH QLPP V S
Sbjct: 362 VVVATNSMAGSEILEDYRFDVCAIDEGSQSMEPSSLIPIVMSRKLIIAGDHKQLPPTVLS 421
Query: 1113 TEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANA 1172
E ++ +LF R+ E+ LQ QYRM + IME SN + Y ++L IA+
Sbjct: 422 DELE---LKKTLFERMIHENSDFSKILQVQYRMNEKIMEFSNEMFYKNKL------IAHG 472
Query: 1173 KIKVSDL----SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKD-HQTLNNPVEACLIAKI 1227
+K +L + S K+ +N +P+ F+N D E +D ++ N EA + +I
Sbjct: 473 SVKFHNLLDIVKNVSKEDKDIVNK-KPLQFINVD---GQEKQDSFKSSYNVEEAYKVVEI 528
Query: 1228 TQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+L K EI + +ITPY++Q I + L+ + +++ ++D +QGR+ + I++SFVR+
Sbjct: 529 VSKLRKYEIP---VSVITPYDAQVKYISNMLNTNEIDVKSVDGFQGRENEVIVISFVRTD 585
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
+ L D R+NVA+TRA++KLI+VGS L K
Sbjct: 586 K------MGFLKDLRRLNVAVTRARRKLIVVGSKNLLIK 618
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A+++ L A+D LI G PGTGKT T+ + +R ++ T+ +N AVDN
Sbjct: 171 SLNEYQKEAVLEALAARDLYLIHGPPGTGKTRTISEVILQEALRKNKVIATADSNIAVDN 230
Query: 1004 LLIKL-KSQSIDFVRIGRHEVVHKEIQKHCL 1033
+L + K +S VRIG + K++ K+ L
Sbjct: 231 ILSNISKYESFKIVRIGHPSRISKKLMKYSL 261
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 455 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 513
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 514 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 573
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 574 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 633
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 634 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 692
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 693 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 741
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 742 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 800
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 801 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 857
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 858 GNPKVLSKQPLWNHLLSFYKEQ 879
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 147/504 (29%), Positives = 240/504 (47%), Gaps = 69/504 (13%)
Query: 890 TSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSY-IWSEKSLND 947
TS++ M+ L +L + + + S + ++ ++AP + F SY I + LN
Sbjct: 314 TSYARMQDALKKLAVNKKSVSEHIYYALMGIDAPSIE----FRVKKKKSYSIPNFAKLNA 369
Query: 948 DQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDNLLI 1006
Q AI VL+ K +LI G PGTGKT T V L + IL+ + +N AVD+L
Sbjct: 370 SQENAIHNVLS-KPLSLIQGPPGTGKTVTSATIVYQLTKLHKGQILVCAPSNIAVDHLAS 428
Query: 1007 KLKSQSIDFVRI-----------GRHEVVHKEIQKHC----------------LSAMNIN 1039
KL+ + +R+ +H + ++++KH LSA
Sbjct: 429 KLEQLGLRVLRLIAKSREDVESSVQHLSLTEQMRKHASKDLKRLLALKEKNGELSASQYK 488
Query: 1040 SVEEIKKR-----LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLM-F 1093
+ + + +D+ +V+ TC+G + L +KF ++DE+ Q + P L P++
Sbjct: 489 QMASLLYKEEALLMDKCQVICCTCVGAGDRRLAKRKFRTVLIDESTQASEPECLIPIVKG 548
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A++ +LVGDH QL P++ S +A + G+ SLF RL I L+ QYRM + E S
Sbjct: 549 ANQVILVGDHQQLGPVILSRKAGDAGLRQSLFERLIYLGHMPIR-LEVQYRMHPCLSEFS 607
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCR--PVIFVNTDMLPAYEAKD 1211
+ + Y L G + ++ S PW P R P++F A
Sbjct: 608 SNVFYDGSLQNGVTAESRSRP-----DSTFPW------PIREIPMMFWAVFGREELSASG 656
Query: 1212 HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV----------S 1261
LN EA KI L+K ++ IG+ITPY QA I + + S
Sbjct: 657 TSYLNR-TEAMNCEKIITRLLKEGVDPGKIGVITPYAGQATFIVQYMEMNGLIADKSRYS 715
Query: 1262 SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
VE+ ++D +QGR+KD I++S VR+++N L D R+NVALTRA+ + ++G+
Sbjct: 716 EVEVASVDSFQGREKDYIILSCVRANDNQ---LIGFLSDPRRLNVALTRARFGMAILGNP 772
Query: 1322 RTLSKVPLLKLLINKVGEQSGILN 1345
+TLSK P+ L+ E+ +++
Sbjct: 773 KTLSKNPMWNRLLMHFREKGCLVD 796
>gi|241713544|ref|XP_002412098.1| DNA-binding protein Smubp-2, putative [Ixodes scapularis]
gi|215505175|gb|EEC14669.1| DNA-binding protein Smubp-2, putative [Ixodes scapularis]
Length = 593
Score = 155 bits (393), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 253/516 (49%), Gaps = 52/516 (10%)
Query: 830 VILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIM 889
V+++++ R V SG+++ +S+ V+V+F + GR++ D + ++ D
Sbjct: 7 VVVASDPGREVVCSGVVSNVSQTDVTVAFDE-----GRDALDGDDGRTFHLLKLAND--- 58
Query: 890 TSFSVMRYNLVQLFL-QSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDD 948
++ +R L +L + + S L ++ P ++ S S P L + +L+D
Sbjct: 59 VTYRRLRRTLEKLSKDKEVRYSSLVEVLFGTSTPGENAES--SSTPPLDFY--NDNLDDS 114
Query: 949 QRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL 1008
QR A+ L ++ A+I G PGTGKT+T+V ++ +GA ++A N
Sbjct: 115 QREAVRFSLRQRELAVIHGPPGTGKTTTLVEVIQQCAKQGAK-------SAASKN----- 162
Query: 1009 KSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVTCLGITN--PL- 1065
K++ + G+ + KE+++ AM + L VV T ++ PL
Sbjct: 163 KAKDAYYKVQGKLSELRKELKERERKAMG--------RVLTNADVVLSTLTSASDDGPLR 214
Query: 1066 -LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L F+V ++DE Q L+ A K +L GDH QLPP + S A + G+ ++L
Sbjct: 215 NLPRSHFEVAVVDECSQALEAACWMALLRAPKCILAGDHLQLPPTIVSETAAKEGLAVTL 274
Query: 1125 FRRLSEEHPQAIS-ALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS 1183
R + +I L QYRM IM+ S+ +Y RL +A++ + S L
Sbjct: 275 MERALILYGDSIKRMLNMQYRMHGAIMKWSSNRLYEGRL------VAHSSV-ASHLLRDL 327
Query: 1184 PWLKEALNPCRPVIFVNTD--MLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDI 1241
P +++ + P++ ++T + + D ++ N EA L+A + L+ + ++ I
Sbjct: 328 PGVEDNDDTATPLLLIDTASCSMTELDTPDDESKGNEGEADLVAIHVERLISSGVDASSI 387
Query: 1242 GIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
+I+PYN Q LIR LS +E+ ++D +QGR+K+ +++S VRS++ L
Sbjct: 388 AVISPYNLQVELIRLRLSSRHPGLEVRSVDGFQGREKEAVVMSLVRSNDAG---NVGFLA 444
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLIN 1335
+ RINVA+TRA++ + ++ T+S+ LK L++
Sbjct: 445 EDRRINVAVTRARRHVAVICDTVTVSRHDFLKSLVD 480
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 205/434 (47%), Gaps = 59/434 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q AI VL K +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 447 LNQSQVDAIRSVLQ-KPLSLIQGPPGTGKTVTSATIIYHLSKISGNQVLVCAPSNVAVDQ 505
Query: 1004 L----------LIKLKSQS-------IDF------VRIGRHEVVHKEIQKHCLSAMNINS 1040
L +++L ++S + F VR+ H ++ + A ++S
Sbjct: 506 LCERIHRTGLKVVRLTAKSREDVESSVSFLALHEQVRMSEHNSEFAKLSQLKNEAGELSS 565
Query: 1041 VEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+E K R L+ VV TC+G +P L+ KF ++DE+ Q+ P + P
Sbjct: 566 QDEKKFRQLTKAAEREILNNADVVCCTCVGAGDPRLSKLKFRSVLIDESTQSAEPECIIP 625
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
LM K VLVGDH QL P++ + +A + G+ SLF RL + Q I L +QYRM +
Sbjct: 626 LMLGCKQVVLVGDHKQLGPVIMNKKAAKAGLSQSLFERLMQLRLQPI-LLNTQYRMHPCL 684
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
E + + Y L G + + V PW + P++F +
Sbjct: 685 SEFPSNMFYDGSLQNGVTQEQRIRKDVD-----FPWPVAEM----PMMFWSNIGNEEIST 735
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---------V 1260
LN EA + KI K ++ +IG+ITPY Q + I ++
Sbjct: 736 SGTSYLNR-TEASNVEKIVTRFFKAGVKPSEIGVITPYEGQRSYIVTTMQNAGTSKKEYY 794
Query: 1261 SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
SVE+ ++D +QGR+KD I++S VRS+EN L D R+NVALTRAK ++++G+
Sbjct: 795 KSVEVASVDAFQGREKDFIVLSCVRSNENQ---GIGFLSDPRRLNVALTRAKYGVVILGN 851
Query: 1321 CRTLSKVPLLKLLI 1334
R LSK L L+
Sbjct: 852 PRVLSKHELWYNLL 865
>gi|344277503|ref|XP_003410540.1| PREDICTED: hypothetical protein LOC100672714 [Loxodonta africana]
Length = 2104
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/472 (29%), Positives = 212/472 (44%), Gaps = 97/472 (20%)
Query: 945 LNDDQRRAIIKV---LTAKDYA-------------LILGMPGTGKTSTMVHAVKALLM-- 986
LN DQ A+I++ + + D A +I G+ G GK+ + + +
Sbjct: 1611 LNKDQATALIQIAHMMISHDSAKVQELRTHTLPITIIHGVFGAGKSYLLAVVILFFVQLF 1670
Query: 987 -----------RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLS 1034
R +L++S TN AVD +L+ L+S + FVR+G + K I + L
Sbjct: 1671 EKSEASTDGNARPWKVLISSSTNVAVDRVLLGLRSLGFEKFVRVGSVRKIAKPILPYSLH 1730
Query: 1035 AMNINSVEEIKKR-------------------------------LDQVKVVAVTCLGITN 1063
A + N E++K+ L QV+VV VTC
Sbjct: 1731 AGSENESEQLKELHALMREELTPVEKVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPF 1790
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGM 1120
P L D KF V ++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+
Sbjct: 1791 PCLNDLKFPVVVLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGL 1850
Query: 1121 EISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
E +LF RL + + L++QYR I ++N L Y L G E ++ S
Sbjct: 1851 EQTLFDRLCLMGHKPV-LLRTQYRCHPAISTIANDLFYDGNLMNGVSE--------TERS 1901
Query: 1181 SCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD 1240
WL + F N L E + + +N EA K+ Q L+ + I G
Sbjct: 1902 PLLEWLPT-------LCFYNVKGLEQIERDN--SFHNMAEAAFTLKLIQSLIASGIAGSM 1952
Query: 1241 IGIITPYNSQANLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRN 1292
IG+IT Y SQ + H LS + +V++ T+D +QG +K+ I++S VR+ +
Sbjct: 1953 IGVITLYKSQMYKLCHLLSAVDFDHSNIKAVQVSTVDAFQGAEKEIIILSCVRTRQ---- 2008
Query: 1293 CTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+ R+NVALTR ++ L++VG+ L K L +I G + G+
Sbjct: 2009 --VGFIDSEKRMNVALTRGRRHLLIVGNLACLRKNRLWGRVIQHCEGREDGL 2058
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 209/446 (46%), Gaps = 71/446 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 424 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 482
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 483 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKSE 536
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L KF ++DE+ Q+
Sbjct: 537 LGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAE 596
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 597 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 655
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM + E + + Y L G + +V PW L+ P++F +
Sbjct: 656 RMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVD-----FPW--PILD--SPMMFWSNLG 706
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS- 1262
A LN EA + KI K ++ KDIGIITPY Q + I S+ +
Sbjct: 707 NEEISASGTSYLNR-TEAANVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGT 765
Query: 1263 --------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAKYG 822
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 823 LVILGNPKVLSKHPLWNCLLQHFKER 848
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + G ++L+ +
Sbjct: 450 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHGGTVLVCA 509
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 510 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 569
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 570 DETGELSSADEKRYRSLKRGAENQLLEAADVICCTCVGAGDMRLSRIKFTSILIDESMQS 629
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 630 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 688
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 689 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 735
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 736 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 794
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 795 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 851
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 852 RAKYGIIIVGNPKVLAKQQLWNHLLN 877
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 210/449 (46%), Gaps = 64/449 (14%)
Query: 940 WSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSY 996
+S +L D R + V A + +LI G PGTGKT T V L+ + G +L+ +
Sbjct: 434 FSAPNLPDLNRSQVYAVKHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAP 493
Query: 997 TNSAVDNLLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCL 1033
+N+AVD L K+ ++ VR+ R + +H +I Q+
Sbjct: 494 SNTAVDQLTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKD 553
Query: 1034 SAMNINSVEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTT 1083
++SV+E + RL + V+ TC+G +P L KF ++DE+ Q T
Sbjct: 554 ETGELSSVDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQAT 613
Query: 1084 LPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQ 1142
P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+ Q
Sbjct: 614 EPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQ 672
Query: 1143 YRMCQGIMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVN 1200
YRM + + Y L G +DE KI PW P +P+ F
Sbjct: 673 YRMHPDLSRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYV 721
Query: 1201 TDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR---- 1255
T LN EA + KI ++ ++ + IG+ITPY Q A L++
Sbjct: 722 TQGQEEIAGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQY 780
Query: 1256 ----HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRA 1311
HS +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA
Sbjct: 781 QGSLHSKLYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRA 837
Query: 1312 KKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
K +I+VG+ + LSK PL L++ EQ
Sbjct: 838 KYGIIIVGNPKVLSKQPLWNHLLSFYKEQ 866
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2 [Bombus
terrestris]
Length = 1108
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 444 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 502
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 503 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 562
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 563 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 622
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 623 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 681
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW P +P+ F T
Sbjct: 682 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPA----PDKPMFFYVTQGQEEI 730
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR--------HSL 1258
LN EA + KI ++ ++ + IG+ITPY Q A L++ HS
Sbjct: 731 AGSGTSYLNR-TEASNVEKIATRFLRCGVKPEQIGVITPYEGQRAYLVQYMQYQGSLHSK 789
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 790 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 846
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L++ EQ
Sbjct: 847 GNPKVLSKQPLWNHLLSFYKEQ 868
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium dendrobatidis
JAM81]
Length = 1119
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 207/445 (46%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL+ K +LI G PGTGKT T V L M +L+ + +N AVD+
Sbjct: 483 LNHSQATAVKSVLS-KPLSLIQGPPGTGKTVTSATIVYHLANMNKGQVLVCAPSNVAVDH 541
Query: 1004 LLIKLKSQSIDFVRIG--RHEVVHKEIQKHCLSAM--NINSVEEIKKR------------ 1047
L K+ + VR+ E + + LS N+++ +++K
Sbjct: 542 LTSKIHKTGLKVVRVTAKSREALESSVSFLSLSEQVKNLDTDRQLQKLIRLKNELGELSS 601
Query: 1048 -----------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
L+ V+ TC+G + L+ F ++DEA Q P L P
Sbjct: 602 QDEKKYKYLFRKAEREILEHADVICTTCMGAGDSRLSKFSFRSVLVDEATQACEPECLIP 661
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
L+ SK VLVGDH QL P+VQ +A + G+ SLF RL + I LQ QYRM +
Sbjct: 662 LVLGSKQVVLVGDHQQLGPVVQHKKASKAGLSQSLFERLIILGLRPIR-LQVQYRMHPCL 720
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPW-LKEALNPCRPVIFVNTDMLPAYE 1208
E + + Y L G + ++ PW + E P+IF +
Sbjct: 721 SEFPSNMFYEGSLQNGVTVQERIRPEID-----FPWPVHET-----PMIFYGSFGQEEIA 770
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRH-----SLS--- 1259
A LN EA + K+ + +K + IGI+TPY Q A +++H SL
Sbjct: 771 ASGKSYLNR-TEAAYVEKVVTKFLKAGVTPAQIGIVTPYEGQRAYVVQHMQFNGSLKKEL 829
Query: 1260 VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+E+ ++D +QGR+KD I+V+ VRS+EN L D R+NVALTRAK L++VG
Sbjct: 830 YKEIEVASVDSFQGREKDYIIVTCVRSNENQ---GIGFLVDPRRLNVALTRAKYGLVIVG 886
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + L+K PL L+ E S ++
Sbjct: 887 NPKVLAKHPLWYQLLMTFREHSCLV 911
>gi|148654244|ref|YP_001274449.1| ATPase AAA [Roseiflexus sp. RS-1]
gi|148566354|gb|ABQ88499.1| AAA ATPase [Roseiflexus sp. RS-1]
Length = 606
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 202/437 (46%), Gaps = 51/437 (11%)
Query: 933 DPALSYIWSEKS--------LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+P L Y E++ LN Q A+ LI G PGTGKT + V+ L
Sbjct: 177 NPTLDYARYERAYERAEQWGLNATQCEALANAYATNLTWLIQGPPGTGKTLVLARLVQLL 236
Query: 985 LMRGASILLTSYTNSAVDNLLIKLK-------SQSIDFVRIGRHEVVHKEIQKHCLSAMN 1037
+ G + +T++T+ A++N L KL + F +IGR Q +
Sbjct: 237 VEDGERVFVTAFTHRAINNALEKLAELDRLGDAAPASFCKIGR--------QASASEGAD 288
Query: 1038 INSVEEIK----KRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF 1093
+ + E + L + T L +FD I DEA Q T+P+++ ++
Sbjct: 289 VRNYETFEGSPLAELSGGYAIGATPFATRTQRLNGVEFDTVIFDEASQITMPLAIMGMLV 348
Query: 1094 ASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELS 1153
A +++ +GDH QLPP++ + RE + S+F L + L YRM + E
Sbjct: 349 AKRYIFIGDHKQLPPVL-TARHREAWLRASVFGALVGRRFDTM--LDETYRMNAELTEWP 405
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ 1213
+ Y +L C S EIA ++ + + L+P P +FV+ +
Sbjct: 406 SQQYYDGQLRCASKEIAQRRVAYMRQPT---RFETILDPEAPKVFVDLH-------HRNA 455
Query: 1214 TLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIR---HSLSVSS-----VEI 1265
T ++ EA LI + EL+ ++ +IG++TPY +QA IR HS+ S + +
Sbjct: 456 TTSSMAEASLICDLIAELLACGVKPDEIGVVTPYRAQARTIRNLLHSMPPDSEQRRKIIV 515
Query: 1266 HTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
T+++ QG+++D IL+S S+ + R+NVA+TRA+ KLI+VGS LS
Sbjct: 516 DTVERMQGQERDVILLSLTTSNPAFAAGIADFFLQPERLNVAITRARVKLIIVGSSHLLS 575
Query: 1326 KV---PLLKLLINKVGE 1339
V P +++L+ ++ E
Sbjct: 576 LVSEDPDIQVLVEQLKE 592
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 155 bits (392), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 209/446 (46%), Gaps = 71/446 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 409 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 467
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 468 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKSE 521
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L KF ++DE+ Q+
Sbjct: 522 LGELSSQDEKRLKQLTRAAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAE 581
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 582 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 640
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM + E + + Y L G + +V PW L+ P++F +
Sbjct: 641 RMHPCLSEFPSNMFYEGSLQNGITSFDRLRREVD-----FPW--PILD--SPMMFWSNLG 691
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS- 1262
A LN EA + KI K ++ KDIGIITPY Q + I S+ +
Sbjct: 692 NEEISASGTSYLNR-TEAANVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQATGT 750
Query: 1263 --------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 751 FKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAKYG 807
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 808 LVILGNPKVLSKHPLWNCLLQHFKER 833
>gi|393235485|gb|EJD43040.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 887
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 207/461 (44%), Gaps = 90/461 (19%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR----GASILLTSYT 997
E LN Q RAI +L ++ +L+ G PGTGKT T+V ++ LL R IL+ +YT
Sbjct: 415 ELPLNSTQVRAIALMLASR-VSLVQGPPGTGKTKTIVETIR-LLKRHFHVPYPILVCTYT 472
Query: 998 NSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMN------------INSVEEIK 1045
N AVDNL+ L + +R G ++ L A + +E +
Sbjct: 473 NIAVDNLVEGLGKAGLRPLRFGSSGTAPAGGAQYTLRARRDAHVLGPHLDKLLGRIERLN 532
Query: 1046 KRLDQVK----------------------------------------VVAVTCLGITNPL 1065
+ L ++ VV TC+ +
Sbjct: 533 RDLRGLRAAEPPNPAAIARREKEVLGLRGAVFKLERLLMQEIVEDSDVVCTTCISAGSAA 592
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFV-LVGDHYQLPPLVQSTEARENGMEISL 1124
L F + +DEA +T P SL PLM + V L+GDH QLPP++ S EA G+ SL
Sbjct: 593 LHVADFPIVFLDEASMSTEPASLIPLMRGCEHVALIGDHKQLPPVITSDEAERGGLGRSL 652
Query: 1125 FRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSP 1184
F RL+EE L QYRM + + YG L G+ A+ ++ + S
Sbjct: 653 FERLTEEGEVPSIMLDVQYRMHPDLSRFPASEFYGRSLLDGTVS-AHGEVAPALRPPASR 711
Query: 1185 WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE-LVKNE-IEGKDIG 1242
+L+ V+F++ EA+ ++ N EA L+ + ++ L++NE + G++IG
Sbjct: 712 FLQRGAG----VVFLDHRH---GEARRDRSRVNVGEARLVCDVVEDLLLQNEDLVGREIG 764
Query: 1243 IITPYNSQANLI------------------RHSLSVSSVEIHTIDKYQGRDKDCILVSFV 1284
+I PY +Q +L+ R + V ++E+ T+D ++GR+K+ I+ S V
Sbjct: 765 VIAPYAAQISLLERVLGENRERWVDALGSERRADEVEAIEVKTVDGFEGREKEVIIFSTV 824
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
R N L D R+NV LTRAK+ L + GS RTL
Sbjct: 825 R---NNGAGQIGFLADRRRLNVGLTRAKRGLFVAGSVRTLG 862
>gi|408388301|gb|EKJ67987.1| hypothetical protein FPSE_11798 [Fusarium pseudograminearum CS3096]
Length = 652
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/576 (25%), Positives = 249/576 (43%), Gaps = 110/576 (19%)
Query: 824 LRSGDYVILSTESDRLAV-----------ASGLITEISRFHVSVSFSKPLRLPGRNSSSD 872
LR+GD V+++ + A A G++T++ R VSV+ + +
Sbjct: 88 LRTGDIVLVAEQPAGSAKKREVKDLEKKGARGVVTKVRREWVSVAI---------DEGKE 138
Query: 873 ADSLLHEVWRID-KDEIMTSFSVMRYNLVQL-FLQSAQSSQLRRMIVDLEAPRFDSGSVF 930
+ VW + DE+ ++ M + + +L + ++ S L R++ L +P + +
Sbjct: 139 EVAFTGRVWAVKLADEV--TYKRMNWTMEKLNKMNESEYSSLTRVLFGLSSPSPVAADLT 196
Query: 931 SQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS 990
+ + W + +LN+ Q+ AI L + + ALI G PGTGKT T++ + ++
Sbjct: 197 KDESVGNLDWFDPTLNESQKDAIRFALASLEVALIHGPPGTGKTHTLIELILQMIRLEQR 256
Query: 991 ILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIK 1045
IL+ +N +VDN++ +L + +R+G + + H L + S V++I+
Sbjct: 257 ILVCGPSNISVDNVVERLAPHKVPILRLGHPARLLPSVVDHSLDVLTQTSEAGAIVKDIR 316
Query: 1046 KRLDQ------------------------------------------VKVVAVTCLGITN 1063
+D KVV T G
Sbjct: 317 TEMDTKQASIKKTKSGKERKAIYNDLKELRKEFRERERRCVSTLIGGSKVVLATLHGAGG 376
Query: 1064 PLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENG---- 1119
L +++FDV I+DEA Q PL+ A K V GDH QLPP ++ST +
Sbjct: 377 YQLRNEEFDVVIIDEASQALEAQCWVPLVSAKKVVCAGDHLQLPPTIKSTNTKVKAPVKE 436
Query: 1120 ---------MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEI 1169
+E++LF RL H P L +QYRM + IM + +Y +L I
Sbjct: 437 GVEITKGATLEVTLFDRLLALHGPSIKRMLTTQYRMHESIMRFPSDELYDSKL------I 490
Query: 1170 ANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKDHQT------------ 1214
A +K L +++ + PVIF++T D E D T
Sbjct: 491 AADAVKHRLLKDLEYEVEDNEDTNEPVIFIDTQGGDFPEKNEEDDKDTPKKGKASLHGDS 550
Query: 1215 LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRHSLSVSSVEIHTIDKYQG 1273
+N +EA L+ + ++LV + +DI ++TPYN+Q A L +E+ ++D +QG
Sbjct: 551 KSNEMEAALVQQHVKKLVAAGVRPEDIAVVTPYNAQLAVLAPLKDKFPGIELGSVDGFQG 610
Query: 1274 RDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
R+K+ ++VS VRS+ LG+ R+N +T
Sbjct: 611 REKEAVIVSLVRSNS---EGEVGFLGERRRLNGKVT 643
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 205/438 (46%), Gaps = 63/438 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L + +++ + +N AVD
Sbjct: 474 LNHSQVNAVASVLR-RPLSLIQGPPGTGKTVTSATIVYHLAQQNQGQVIVCAPSNVAVDQ 532
Query: 1004 LLIKLKSQSIDFVRIG----------------RHEVVHKEIQKHCLSAM---------NI 1038
L K++ + VR+ ++V H + +H A +
Sbjct: 533 LAEKIEQTGLKVVRVAAKSREAVLSPVEHLTLHYQVAHLDSPEHAELAKLQQLKDELGEL 592
Query: 1039 NSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
+S +E K R L VV T +G +P L + +F +MDE+ Q T P L
Sbjct: 593 SSNDERKYRALKRATEREILQSADVVCTTAVGAGDPRLANFRFRQVLMDESTQATEPECL 652
Query: 1089 GPL-MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQ 1147
PL M A + V+VGDH QL P+V +A G+ SLF RL Q I LQ QYRM
Sbjct: 653 IPLIMGAKQVVMVGDHCQLGPVVACKKAARAGLGQSLFERLILLGVQPIR-LQVQYRMHP 711
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ E + Y L G +A A+ ++ ++ PW K P P++F +
Sbjct: 712 CLSEFPSNTFYEGALQNG---VAAAERLMTHVN--FPWPK----PSTPMMFWSMTGAEEI 762
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ----------ANLIRHS 1257
A LN EA + KI ++ + + +G++TPY Q A ++R
Sbjct: 763 SASGTSYLNR-TEAVSVEKIVTHFLRAGVAPEALGVVTPYEGQRAYVVQHMTRAGVLRQQ 821
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
L + +++ ++D +QGR+KD I++S VRS+E L D R+NVA+TRA+ L++
Sbjct: 822 L-YNEIQVASVDSFQGREKDFIILSCVRSNE---KAGIGFLNDPRRLNVAMTRARSGLVI 877
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
+G+ + LS+ PL L+
Sbjct: 878 LGNPKVLSRQPLFHDLLQ 895
>gi|398332764|ref|ZP_10517469.1| DNA and RNA helicase subunit [Leptospira alexanderi serovar Manhao 3
str. L 60]
Length = 637
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 210/459 (45%), Gaps = 76/459 (16%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN 1003
SLN+ Q+ A++ + ++D +I G PGTGKT+T+ V L+ +L+++ T+SA D
Sbjct: 188 SLNESQKNAVLHSVLSEDVTIIHGPPGTGKTTTLTEIVSQLVADEKRVLVSAPTHSACDL 247
Query: 1004 LLIKLKSQSIDFVRIG------------------------------RHEVVH--KEIQKH 1031
L+ + ++ I +R+G R +V+ K+ +K+
Sbjct: 248 LVESIFAKGISVLRLGHPARISDAALHTTLDYKLFHHPDGKLLSEYRRDVIEISKQAKKY 307
Query: 1032 CLSAMN---------INSVEEIKKRLDQVK------------VVAVTCLGITNPLLTDKK 1070
+ V+E+KK + ++ V+ T + +L +
Sbjct: 308 KRNFGEKEREERKNLFQEVKELKKTIRSMERGLIDSLVSSHPVIVSTPVASARSVLEGRT 367
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD C++DE+ Q P P++ + + +L GDH QLPP S + +N +E +LF + +E
Sbjct: 368 FDFCVLDESSQGLEPAFWIPILKSDRVILAGDHKQLPP---SLFSEKNSLEFTLFEKAAE 424
Query: 1131 --EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
E + L +QYRM I + Y +RL G ++S+ P+
Sbjct: 425 RLEMSGRVFLLDTQYRMKDEISSFPSMEFYSNRLKSGRP----GPERISNFPETFPF-GN 479
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
AL +++T + E +L N EA L + L +N ++I I++PY
Sbjct: 480 ALQ------WIDTAGTDSEEVIVDDSLINSFEADLQVHLCTLLQENNWPEEEITILSPYR 533
Query: 1249 SQANLIRHSL---SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRIN 1305
+Q LI L S +++ TID +QGR+ CIL FVRS+ R S L + RIN
Sbjct: 534 AQVRLILEKLQEAGFSKIQVSTIDSFQGRENRCILFGFVRSNSEGR---SGFLKESRRIN 590
Query: 1306 VALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
V +TRAK L+ +G TL + P L LI V E G+
Sbjct: 591 VGMTRAKDLLLCIGDSSTLLEDPFLSRLIRFV-EDKGVF 628
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 130/437 (29%), Positives = 207/437 (47%), Gaps = 65/437 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 438 LNGSQINAVKSVLQ-KPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 496
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIKKRLDQVK 1052
L ++ + VR+ R +V +H++++ + + + +N + ++K L ++
Sbjct: 497 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRMND-TNVELNKLNQLKSELGELS 555
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L KF ++DE+ Q+ P +
Sbjct: 556 SQDEKKFKQLTRAAEREILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSAEPECMI 615
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PL+ K VLVGDH QL P++ + +A + G+ SLF RL I LQ QYRM
Sbjct: 616 PLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIR-LQVQYRMHPC 674
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPA 1206
+ E + + Y L G + + +V PW P P++F +
Sbjct: 675 LSEFPSNMFYEGSLQNGVTRESRMRKEVD-----FPW------PVGDSPMMFWSNLGNEE 723
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS---- 1262
A LN EA + KI K ++ +DIGIITPY Q + + S+ +
Sbjct: 724 ISASGTSYLNR-TEAANVEKIVTRFFKAGVKPQDIGIITPYEGQRSYVVQSMQANGTFKK 782
Query: 1263 -----VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK L++
Sbjct: 783 ENYKEIEVASVDAFQGREKDFIVLSCVRSNDHQ---GIGFLSDPRRLNVALTRAKYGLVI 839
Query: 1318 VGSCRTLSKVPLLKLLI 1334
+G+ + LSK PL L+
Sbjct: 840 LGNPKVLSKHPLWHYLL 856
>gi|374339063|ref|YP_005095799.1| DNA helicase [Marinitoga piezophila KA3]
gi|372100597|gb|AEX84501.1| DNA helicase, putative [Marinitoga piezophila KA3]
Length = 649
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 172/326 (52%), Gaps = 20/326 (6%)
Query: 1024 VHKEIQKHCLSAMNINSVEEIKKRLDQVKVVAVT--CLGITNPLLTDKKFDVCIMDEAGQ 1081
++ E+QK A + E IKK +++ +++ T GI L + FDV ++DEA Q
Sbjct: 337 INNEVQKLFDKAREMEE-ELIKKIIEEYQIIVSTNSTSGIDE--LENITFDVVVIDEASQ 393
Query: 1082 TTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
+T P P+ K ++ GDH QLPP + + + EN + +LF R+ ++P + L+
Sbjct: 394 STEPSCYIPITHGKKIIMGGDHRQLPPTILNKDV-ENILSKTLFERMINKYPSHSAILKV 452
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT 1201
QYRM IM+ SN Y L +D + N + + DLS + + + P++FV+T
Sbjct: 453 QYRMNDKIMQFSNQKFYNGILRS-ADNVYNQTLTL-DLSEVNDEKTKEILDTTPIVFVDT 510
Query: 1202 DMLPA-YE--AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
P +E K ++ NP+EA ++ ++ L + + D GIITPY Q ++
Sbjct: 511 SANPERFEIYKKGSKSKYNPLEAKIVIELATILKEQNV---DFGIITPYKDQMKYLKEK- 566
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+ ++T+D +QGR+ D I++S RS++ T L D R+NVA+TRA+KKLI++
Sbjct: 567 --TDFYVNTVDGFQGRENDVIILSLTRSNDE---GTIGFLKDERRLNVAITRARKKLIII 621
Query: 1319 GSCRTLSKVPLLKLLINKVGEQSGIL 1344
G TL PL LIN + I+
Sbjct: 622 GDISTLKNYPLFDELINYISLHGKII 647
Score = 63.5 bits (153), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 140/338 (41%), Gaps = 72/338 (21%)
Query: 729 CSFLRHWDRLIDLEAK-EMQVVKNEIWC---SRGSGGNHFTGCLSSIVLDASNEHQKSYR 784
+F I+LE + E+Q +KNEI R G TG S ++
Sbjct: 1 MNFFEKLYEAIELEKEAEIQAMKNEIKLYKKEREKMGRAITGL--------SGKYLGREI 52
Query: 785 DNRFVYHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVILSTESDRLAVASG 844
N ++ F R+ KD+ + SGD V++S + +
Sbjct: 53 GNLYIVKFGRK----------------------KDIKTEISSGDIVLVSKGDPLKSDLTA 90
Query: 845 LITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLFL 904
+TE+ + ++ VSFS+ ++P VW I + LFL
Sbjct: 91 TVTEVGKKYIIVSFSE--KIP--------------VWVYKSKNIR----------LDLFL 124
Query: 905 QSAQSSQLRRMIVDLEAPRFDSG---SVFSQDPALSYIWSEK------SLNDDQRRAIIK 955
++++ I+ + + ++F+ + I EK SLN Q+ A+ K
Sbjct: 125 NEITFKRMQKAILKMNYAENELKILKNIFTGKYKPTPIKKEKIKFFDNSLNKSQKEAVEK 184
Query: 956 VLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNLLIKL-KSQSID 1014
+ +K+ LI G PGTGKT T+ + + +L+T+ +N+A DN+L L K ++
Sbjct: 185 AIGSKEIFLIHGPPGTGKTRTLTEIIIQEAKKEKKVLVTADSNAATDNILGNLIKYETFK 244
Query: 1015 FVRIGRHEVVHKEIQKHCLS--AMNINSVEEIKKRLDQ 1050
R+G V ++++KH L A N +EI K D+
Sbjct: 245 ICRLGHPGRVDEDLKKHSLYYIAENHEEYKEIVKIRDE 282
>gi|449451781|ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
Length = 957
Score = 155 bits (391), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/470 (27%), Positives = 223/470 (47%), Gaps = 77/470 (16%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKALLMRGASI 991
D L I +D Q+ AI + L K LI+ G PGTGKT + + + +G +
Sbjct: 471 DTNLDGIVFNGDFDDSQKSAISRALNKKRPILIIQGPPGTGKTGLLKELIALAVQQGERV 530
Query: 992 LLTSYTNSAVDNLLIKLKSQSIDFVRIGR-------------HEVVHKEIQ--------- 1029
L+T+ TN+AVDN++ KL + I+ VR+G E+V+ E+
Sbjct: 531 LVTAPTNAAVDNMVEKLSNIGINIVRVGNPARISSSVASKSLAEIVNSELSSFRTDIERK 590
Query: 1030 --------KHCLSAMNINS-VEEIKKRLDQ----------------VKVVAVTCLGITNP 1064
+ CL ++ + + ++ K+L + +VV T G +P
Sbjct: 591 KADLRKDLRQCLKDDSLAAGIRQLLKQLGKSLKKKEKETVKEVLSNAQVVLATNTGAADP 650
Query: 1065 LLTD-KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEIS 1123
L+ +KFD+ ++DEAGQ P P++ + +L GD QL P++ S +A E G+ +S
Sbjct: 651 LIRKLEKFDLVVIDEAGQAIEPACWIPILQGRRCILAGDQCQLAPVILSRKALEGGLGVS 710
Query: 1124 LFRRLSEEHPQAISALQS-QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSD-LSS 1181
L R + H A++ + + QYRM I ++ +Y D I + VS L
Sbjct: 711 LLERAATLHEGALTTMLTIQYRMNDAIASWASKEMY--------DGILESSPTVSSHLLV 762
Query: 1182 CSPWLKEALNPCRPVIFVNTDMLP----AYEAKDH------QTLNNPVEACLIAKITQEL 1231
SP++K P++ ++T M P + ++H +L N EA ++ + L
Sbjct: 763 NSPFVKPTWITQCPLLLLDTRM-PYGSLSVGCEEHLDPAGTGSLYNEGEADIVVQHVCSL 821
Query: 1232 VKNEIEGKDIGIITPYNSQANLIRHSL----SVSSVEIHTIDKYQGRDKDCILVSFVRSS 1287
+ + + + I + +PY +Q L+R+ L + +E+ TID +QGR+ D +++S VRS+
Sbjct: 822 IYSGVSPRAIAVQSPYVAQVQLLRNRLDEIPESAGIEVATIDSFQGREADAVIISMVRSN 881
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LGD R+NVA+TRA+K + +V T+ + L L+ +
Sbjct: 882 N---LGAVGFLGDSRRMNVAITRARKHVALVCDSSTICQNTFLARLLRHI 928
>gi|321261778|ref|XP_003195608.1| DNA helicase [Cryptococcus gattii WM276]
gi|317462082|gb|ADV23821.1| DNA helicase, putative [Cryptococcus gattii WM276]
Length = 748
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/497 (28%), Positives = 217/497 (43%), Gaps = 115/497 (23%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--------I 991
W + LND Q+ +I L A + A I G PGTGKT T+V + LL R AS I
Sbjct: 231 WFGQHLNDSQKESIKFCLKANEVACIHGPPGTGKTHTLVELIFQLLSRTASPNTTLPPRI 290
Query: 992 LLTSYTNSAVDNLLIKLKS-----------QSIDFVRIGRHEVVHKEIQKHCLSAMNINS 1040
L+T+ +N A+DNLLI+L S F+R+G VH+++ K L NS
Sbjct: 291 LITTPSNLALDNLLIRLHILTQQPPYNSLLSSNSFLRMGHPTRVHRDLVKETLDWKAANS 350
Query: 1041 -----------------------------------------VEEIKKR------------ 1047
V E++K
Sbjct: 351 DQGELLKDVGKEMQGHLNALGKKRGEKGAVKGKERGKKWEEVRELRKEYRRRESKVVETV 410
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
++ ++V TC + L + FDVCI+DEA Q V P++ + K +L GD QLP
Sbjct: 411 VNGAQIVLATCHSAGSRQLNNMTFDVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLP 470
Query: 1108 PLVQSTE-----------------------ARENGMEISLFRRLSEEHPQAIS-ALQSQY 1143
P + S E +E +LF RL + + I LQ QY
Sbjct: 471 PTIMSKENAPPLKDLQGAIDQIKLGDSLSIKPPRTLETTLFERLEKLYGLGIKRILQVQY 530
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS-SCSPWLKEALNPCRPVIFVNTD 1202
RM + I + +Y L + +++ ++ S +K+ L P V+F +T
Sbjct: 531 RMNEHIAVFPSETLYESALISDASVAKRTLLELPSVNDKTSEDVKDDLEPT--VVFFDTA 588
Query: 1203 MLPAYEAKD-----------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
YE + + +N EA ++A+ ++L+ I +IGI+TPY +Q
Sbjct: 589 DCEFYERTEGDGEAIKSSIGEGSKSNENEAEIVARWARKLISLGIPPIEIGIVTPYQAQV 648
Query: 1252 NLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
I L + I +ID QG++++ I++S VRS NP + LG++ R+NVA+T
Sbjct: 649 TFISSLLHEEYPEMTIGSIDGLQGQEREAIILSLVRS--NP-SGEVGFLGEYRRLNVAMT 705
Query: 1310 RAKKKLIMVGSCRTLSK 1326
RAK++L +VG +T+SK
Sbjct: 706 RAKRQLCVVGDSKTVSK 722
>gi|353241966|emb|CCA73744.1| related to regulator of nonsense transcripts 1 [Piriformospora indica
DSM 11827]
Length = 850
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 142/459 (30%), Positives = 212/459 (46%), Gaps = 84/459 (18%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL---LMRGASILLTSYTNSA 1000
+LN Q +AI ++ + +L+ G PGTGKT T++ A++ L +L+ +YTN A
Sbjct: 325 TLNASQTQAI-ALMFKERLSLVQGPPGTGKTRTIIEALRILKSHFKVEHPLLVCTYTNVA 383
Query: 1001 VDNLLIKLKSQSIDFVRIG--------RH----EVV----------------HKEI---- 1028
VDNL+ + ++ +R+G RH EVV +E+
Sbjct: 384 VDNLVEGIADAGMNPLRVGNEGGAQMERHPRWPEVVKIMNEIAQIRQIRDRLRREMGSAP 443
Query: 1029 ---QKHCLSAMN--INSVEEIKKRLDQV---------KVVAVTCLGITNPLLTDKKFDVC 1074
QK +S + I+ + E K +L+ V+ TC+ + F V
Sbjct: 444 SDQQKESISRLGNKIHLLRESKAKLESAMRYMIFKSADVICTTCITAGSSAFRMMDFPVV 503
Query: 1075 IMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
+DEA +T P SL PLM K L+GDH QLPP++ S A+E G+ SLF RL EE
Sbjct: 504 FLDEASMSTEPASLIPLMHGCKHLALIGDHKQLPPVITSELAKEGGLGKSLFERLIEEGS 563
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWL---KEAL 1190
L +QYRM I + YG L G+ A + + S L K L
Sbjct: 564 VPSVMLDTQYRMHPSISAFPSDEFYGKALRDGTISPAGG-VPATLAPPHSMHLARRKSKL 622
Query: 1191 NPCRP-VIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELV--KNEIEGKDIGIITPY 1247
P V+F++ D +E ++ N E ++A + ++L+ + G+DIGII+PY
Sbjct: 623 TGEIPAVLFIHHD---NHEISRDRSRANLEEMKIVAAVLEDLLLMNPGLRGRDIGIISPY 679
Query: 1248 NSQANLIRHSLSVSS--------------------VEIHTIDKYQGRDKDCILVSFVRSS 1287
+Q ++ L S VEI T+D ++GR+K+ I+ S VR
Sbjct: 680 VAQVRMLNKMLKEDSSWADAFRDALGDPRCHELQDVEIKTVDGFEGREKEIIIFSTVR-- 737
Query: 1288 ENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
N L D R+NVALTRAK+ L +VGS TLSK
Sbjct: 738 -NNSWGHIGFLADRRRMNVALTRAKRALFVVGSISTLSK 775
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 205/438 (46%), Gaps = 65/438 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS-ILLTSYTNSAVDN 1003
LN Q A+ L + +LI G PGTGKT T V L + +L+ + +N AVD
Sbjct: 452 LNRSQVYAVKHALQ-RPLSLIQGPPGTGKTVTSATVVYHLAKQSTGPVLVCAPSNIAVDQ 510
Query: 1004 LLIKLKSQSIDFVRI------------------------GRHEVVHKEIQKHCLSAMNIN 1039
L K+ + VR+ H +HK +Q+ ++
Sbjct: 511 LTEKVHQTGLRVVRLCAKSREALNSPVSFLALHNQIRSMDGHSELHK-LQQLKDETGELS 569
Query: 1040 SVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
S +E + R L+ V+ TC+G +P L KF ++DE+ Q T P +
Sbjct: 570 SADEKRYRMLKKACERELLEAADVICCTCVGAGDPRLARFKFHSILIDESMQATEPECMV 629
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ +K +LVGDH QL P+V +A G+ SLF RL + + L+ QYRM
Sbjct: 630 PVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPLR-LEVQYRMHPQ 688
Query: 1149 IMELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ + + Y L G +DE +++ D PW + P RP++F
Sbjct: 689 LAQFPSNFFYEGSLQNGVFADE---RRMRGLDF----PWPQ----PERPMLFYACQGQEE 737
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRH--------S 1257
LN EA L+ KI +++ ++ + +G+ITPY Q A L++H S
Sbjct: 738 MAGSGTSYLNR-TEAALVEKICTRFLRSGVKPQQVGVITPYEGQRAYLVQHMQFQGALHS 796
Query: 1258 LSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA+ LI+
Sbjct: 797 KLYQEIEVASVDAFQGREKDLIVMSCVRSNEHQ---GIGFLNDPRRLNVALTRARYGLII 853
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
VG+ + LSK PL L+
Sbjct: 854 VGNPKVLSKQPLWNHLLT 871
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 154 bits (390), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 208/448 (46%), Gaps = 75/448 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 426 LNGSQINAVKSVLQ-RPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 485 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKAE 538
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L+ KF ++DE+ Q+
Sbjct: 539 LGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLSKLKFRTVLIDESTQSAE 598
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 599 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 657
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT 1201
RM + + + + Y L G I + V PW P P++F +
Sbjct: 658 RMHPCLSQFPSNMFYEGSLQNGVSAIDRLRRDVD-----FPW------PVVDSPMMFWSN 706
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
A LN EA + KI K + +DIGIITPY Q + I S+ +
Sbjct: 707 LGNEEISASGTSYLNR-TEATNVEKIVTRFFKAGVHPQDIGIITPYEGQRSYIVSSMQAN 765
Query: 1262 S---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 766 GTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAK 822
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ EQ
Sbjct: 823 YGLVILGNPKVLSKHPLWNCLLQHFKEQ 850
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 138/445 (31%), Positives = 203/445 (45%), Gaps = 67/445 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L +G IL+ + +N AVD
Sbjct: 489 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSASIVYHLAKQGLGQILVCAPSNIAVDQ 547
Query: 1004 LLIKLKSQSIDFVRIG--RHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N++S+ E++K L Q+K
Sbjct: 548 LTEKIHKTGLKVVRLAAKSREAIDSPVGFLALHNQVRNMDSMPELQK-LQQLKDDQGELS 606
Query: 1053 -----------------------VVAVTCLGITNPLLTDKK--FDVCIMDEAGQTTLPVS 1087
V+ TC+G +P L K F ++DE+ Q T P
Sbjct: 607 SSDEKRYKTLKTSAEKELLQHADVICTTCIGAGDPRLRVAKLRFRCVLIDESTQATEPEC 666
Query: 1088 LGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
+ P++ +K VLVGDH QL P+V +A G+ SLF RL + I LQ QYRM
Sbjct: 667 MVPIVHGTKQLVLVGDHCQLGPVVMCKKAASAGLSQSLFERLVVLGIRPIR-LQVQYRMH 725
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDML 1204
+ E + L Y L G ++ V PW P +P+ F T
Sbjct: 726 PSLSEFPSNLFYDGTLQNGVTVAERSQPGVD-----FPW------PVGDKPMFFYATTGQ 774
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLI---------R 1255
+ LN EA + KI ++ ++ + +GIITPY Q I
Sbjct: 775 EEISSSGTSYLNR-TEAATVEKIATRFLRAGVKPEQMGIITPYEGQRAYIVAYMQFSGSL 833
Query: 1256 HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
HS ++E+ ++D +QGR+KD I++S RS+E+ L D R+NVALTR+K L
Sbjct: 834 HSSLYQNIEVASVDAFQGREKDYIIMSCARSNEHQ---GIGFLKDPRRLNVALTRSKYGL 890
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGEQ 1340
I++G+ + LSK PL L+N E+
Sbjct: 891 IIIGNPKVLSKQPLWNHLLNDYKEK 915
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR-GASILLTSYTNSAVDN 1003
LN Q A+ K + +LI G PGTGKT T V L+ + G +L+ + +N+AVD
Sbjct: 442 LNRSQVYAV-KHAVQRPLSLIQGPPGTGKTVTSATIVYQLVKQNGGPVLVCAPSNTAVDQ 500
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEI------------QKHCLSAMNINS 1040
L K+ ++ VR+ R + +H +I Q+ ++S
Sbjct: 501 LTEKIHKSNLKVVRLCAKSREAIDSPVSFLALHNQIKNMETNTELQKLQQLKDETGELSS 560
Query: 1041 VEEIKKRL----------DQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
V+E + RL + V+ TC+G +P L KF ++DE+ Q T P + P
Sbjct: 561 VDEKRYRLLKKAAEKELLEAADVICCTCVGAGDPRLHRLKFHSILIDESMQATEPECMVP 620
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
++ +K +LVGDH QL P+V +A G+ SLF RL + L+ QYRM +
Sbjct: 621 VVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEVQYRMHPDL 679
Query: 1150 MELSNALIYGDRLSCG--SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAY 1207
+ Y L G +DE KI PW + +P+ F T
Sbjct: 680 SRFPSNFFYEGSLQNGVCADERKLLKIDF-------PWPVQD----KPMFFYVTQGQEEI 728
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIRH--------SL 1258
LN EA + KIT ++ ++ + IG+ITPY Q A L++H S
Sbjct: 729 AGSGTSYLNR-TEASNVEKITTRFLRCGVKSEQIGVITPYEGQRAFLVQHMQYQGSLHSK 787
Query: 1259 SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK +I+V
Sbjct: 788 LYQEIEVASVDAFQGREKDIIIMSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYGIIIV 844
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK L L+N EQ
Sbjct: 845 GNPKVLSKQALWNHLLNFYKEQ 866
>gi|146163349|ref|XP_001011272.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila]
gi|146146126|gb|EAR91027.2| hypothetical protein TTHERM_00146330 [Tetrahymena thermophila SB210]
Length = 1186
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 212/408 (51%), Gaps = 49/408 (12%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR------GASILLTSYTN 998
LN Q +AI L +K+ +LI G PGTGKT T V + + IL+ + +N
Sbjct: 750 LNQSQLQAIQSSL-SKNISLIQGPPGTGKTETAAQLVLEIWYKINKNQQNEKILVCAPSN 808
Query: 999 SAVDNL------------LIKLKSQSIDFVRIG---RHEVVHKEIQKHCLSAMNINSV-E 1042
A DN+ +I++ SQ+ V++ + V+HK ++K N NSV +
Sbjct: 809 LAADNISDRIHAQNREIKVIRIVSQARQRVKVSYQFQDIVLHKVLKKEGF--FNKNSVLK 866
Query: 1043 EIKKRLDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMF-ASKFVLVG 1101
K+ ++ V+ TC+ + + F ++DEA Q P ++ PL A K +L+G
Sbjct: 867 RAKQLIENADVICTTCINSVDKFIKGISFSTVVIDEANQAIEPETIIPLQHQAKKLILIG 926
Query: 1102 DHYQLPPLVQSTEARENGMEISLFRRLSEEH--PQAISALQSQYRMCQGIMELSNALIYG 1159
DH QLPP++ S +A ++G++ SLF RL + PQ +S QYRM I +L++++ Y
Sbjct: 927 DHKQLPPIILSIQASKDGLKRSLFSRLVQAGLIPQFLSI---QYRMHPEIRKLASSIFYQ 983
Query: 1160 DRLSCGSDEIANAKIKVSDLSSCSP--WLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNN 1217
++L G +E D + WL + P+ F + +D ++ N
Sbjct: 984 NQLKDGVNE--------QDRTPTPKFNWLNNKI----PIQFYDVQG-QEITLQDGKSFIN 1030
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKD 1277
EA L+ + +L++ ++ DIGIITPY SQ+N I + S++ I T +QG+++D
Sbjct: 1031 EEEAKLVKSLVSQLIQAGVKDNDIGIITPYLSQSNYISQLIKNSNILIDTTYSFQGQERD 1090
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLS 1325
I++S VR + N +N +L INV++TRAK+ L++VG+ + +S
Sbjct: 1091 YIIISCVRIN-NFQNL--GILRTPQLINVSITRAKRGLLIVGNKKHVS 1135
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 210/446 (47%), Gaps = 71/446 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 424 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 482
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ MN +++E +K
Sbjct: 483 LCERIHRTGLKTVRVTAKSREDVESAVGFLSLHEQVR------MNDSNIELVKLNQLKAE 536
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L+ KF ++DE+ Q+
Sbjct: 537 LGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLSKGKFRTVLIDESTQSAE 596
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 597 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 655
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM + E + + Y L G I A D+ P + + P++F +
Sbjct: 656 RMHPCLSEFPSNMFYEGSLQNG---ITIADRVRRDVDFPWPIIDD------PMMFWSNLG 706
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS- 1262
A LN EA + KI K ++ KDIGIITPY Q + I S+ +
Sbjct: 707 NEEISASGTSYLNR-TEATNVEKIVTRFFKAGVQPKDIGIITPYEGQRSYIVSSMQANGT 765
Query: 1263 --------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRA+
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQ---GIGFLSDPRRLNVALTRARFG 822
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 823 LVILGNPKVLSKHPLWNCLLQHFKER 848
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 154 bits (389), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 210/446 (47%), Gaps = 71/446 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 424 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 482
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ MN +++E +K
Sbjct: 483 LCERIHRTGLKTVRVTAKSREDVESAVGFLSLHEQVR------MNDSNIELVKLNQLKAE 536
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L+ KF ++DE+ Q+
Sbjct: 537 LGELSSQDEKRLKQLTRSAEREILTNADVICCTCVGAGDPRLSKGKFRTVLIDESTQSAE 596
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 597 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 655
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM + E + + Y L G I A D+ P + + P++F +
Sbjct: 656 RMHPCLSEFPSNMFYEGSLQNG---ITIADRVRRDVDFPWPIIDD------PMMFWSNLG 706
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS- 1262
A LN EA + KI K ++ +DIGIITPY Q + I S+ +
Sbjct: 707 NEEISASGTSYLNR-TEATNVEKIVTRFFKAGVQPRDIGIITPYEGQRSYIVSSMQATGT 765
Query: 1263 --------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRA+
Sbjct: 766 FKKEHYKEIEVASVDAFQGREKDYIILSCVRSNDHQ---GIGFLSDPRRLNVALTRARFG 822
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 823 LVILGNPKVLSKHPLWNCLLQHFKER 848
>gi|213407736|ref|XP_002174639.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
gi|212002686|gb|EEB08346.1| DNA-binding protein SMUBP-2 [Schizosaccharomyces japonicus yFS275]
Length = 655
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/456 (29%), Positives = 217/456 (47%), Gaps = 77/456 (16%)
Query: 928 SVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR 987
++ S++ AL+Y ++ LN+ Q++A+ ++A + ALI G PGTGKT T+V V+
Sbjct: 189 TLASEELALTYYNTD--LNESQKKAVSFAVSAPELALIHGPPGTGKTHTLVEVVRQFAKL 246
Query: 988 GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR--------------------------- 1020
G +L+ +N +VDNL+ +L I VR+G
Sbjct: 247 GQRVLVCGPSNLSVDNLVERLAPCGIPMVRLGHPARLLPGVVNYSLAYLSRTGNAGEVLR 306
Query: 1021 -----HEVVHKEIQK-----------HCLSAMNINSVEEIKKRLDQV--------KVVAV 1056
+ +H +I K + A+N ++ KK D+V +VV
Sbjct: 307 AISQDADALHAKISKTKSGREKREIYKSIRALN----KDYKKYEDKVVRDIIARSQVVFA 362
Query: 1057 TCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEAR 1116
T G + LL+ K+FDV I+DEA Q PL+ K +L GDH+QLPP V R
Sbjct: 363 TLHGAGSKLLSHKQFDVVIIDEASQALEAQCWIPLLQTKKAILAGDHHQLPPNV-----R 417
Query: 1117 ENGMEISLFRR-LSEEHPQAISALQSQYRMCQGIMELSNALIYGDRL---SCGSDEIAN- 1171
G +SLF LS P+ L QYRM + I S+ Y +L S D +
Sbjct: 418 TKGRYVSLFESLLSRYGPRVKRFLNVQYRMHEVISAFSSKSFYEGQLKPDSSVKDRLLKD 477
Query: 1172 -AKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQE 1230
+ ++ +DL++ + + + ++ F + + + + +N EA ++
Sbjct: 478 LSGVEDTDLTNDALYFYDTMHE----YFEDENSVSEKSVLLQMSKSNQWEAKIVCNHAAS 533
Query: 1231 LVKNEIEGKDIGIITPYNSQANLIRHSLSVS--SVEIHTIDKYQGRDKDCILVSFVRSSE 1288
LV + +I IITPYN+QA L+R+ L ++E+ +ID QGR+K+ I+ S VRS++
Sbjct: 534 LVDAGLNPSEIAIITPYNAQATLLRNLLHERNLAIEVGSIDSVQGREKEAIIFSLVRSND 593
Query: 1289 NPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
+ + R+NVA+TRAK+ L +VG T+
Sbjct: 594 ERE---IGFMSEKRRLNVAITRAKRHLCVVGDAMTV 626
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 201/434 (46%), Gaps = 62/434 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LN+ Q AI +VL + ++LI G PGTGKT T V L G +L+ + +N AVD L
Sbjct: 503 LNESQMSAITRVLR-EPFSLIQGPPGTGKTVTSATLVYHLSKFG-QVLVCAPSNIAVDQL 560
Query: 1005 LIKLKSQSIDFVRIG--------------------RHEVVHKEIQKHCLSAMNINSVEEI 1044
++ + VR+ R+ H E+ K N ++++
Sbjct: 561 TERIHRTGLKVVRLAAKSREAIESSVSFLALHSQIRNSAAHPELAKLMQLREEQNGLDDV 620
Query: 1045 -KKRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL 1091
++R Q+K V+ TC+G +P L +F ++DEA Q T P ++ P+
Sbjct: 621 DERRFRQLKFAAERDFLKNADVICTTCVGAGDPRLARMRFRAVLVDEATQATEPEAIIPI 680
Query: 1092 -MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIM 1150
M A + VLVGDH QL P+V +A + SLF RL + I L+ QYRM +
Sbjct: 681 VMGAKQVVLVGDHCQLGPVVMCKKAAKANFTQSLFERLVMGQNRPIR-LEIQYRMHPCLS 739
Query: 1151 ELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAK 1210
+ Y L G + +D + +P +P P+ F + A
Sbjct: 740 AFPSDTFYEGSLQNG--------VLAADRTPKTPAFTWP-DPNNPMFFWSNLGQEELSAS 790
Query: 1211 DHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSV------- 1263
LN EA + K+ +L+K+ + IG+ITPY Q I +++ + V
Sbjct: 791 GTSYLNR-AEASSVEKLVTQLLKSGTKPDQIGVITPYEGQRAFILQTMTANGVLRSQLYQ 849
Query: 1264 --EIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSC 1321
E+ ++D +QGR+KD I++S VRS+ L D R+NVALTRA+ L+++G+
Sbjct: 850 QIEVASVDAFQGREKDYIILSCVRSA------GIGFLNDPRRLNVALTRARYGLVVIGNA 903
Query: 1322 RTLSKVPLLKLLIN 1335
L++ PL +I
Sbjct: 904 HRLARDPLWNEVIT 917
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 403 AGPMRTQMPKKFSVQGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYNLA 461
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 462 KINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 521
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 522 NIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 581
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 582 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 641
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 642 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 694
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 695 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 750
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 751 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 807
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 808 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 840
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 425 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYHLA 483
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 484 KINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 543
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 544 NIELVKLNQLKAELGELSSQDEKKYKQLVRAAEREILSNADVICCTCVGAGDPRLAKFKF 603
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 604 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 663
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 664 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 716
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 717 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 772
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 773 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 829
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 830 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 862
>gi|398347439|ref|ZP_10532142.1| DNA and RNA helicase [Leptospira broomii str. 5399]
Length = 627
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 196/455 (43%), Gaps = 78/455 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDNL 1004
LND QRRAI +L +D L+ G PGTGKT T+ A++ L+ RG +L+++ TN+A D L
Sbjct: 175 LNDSQRRAISAILQTEDLILLHGPPGTGKTKTITEAIRILVDRGKKVLVSAPTNAATDLL 234
Query: 1005 LIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNIN-------------SVEEIKKRLDQV 1051
L + +RIG + + + L A N+N + E+ K+ +
Sbjct: 235 AESLGRMGVSALRIGHPARMSESVLSVSLDA-NLNRHPDFKLIERDKREIGELLKKAGKY 293
Query: 1052 K-----------------------------------------VVAVTCLGITNPLLTDKK 1070
K V+ T G ++ LL
Sbjct: 294 KRTFGREEAEERRRLYQEAKELRKGIKERQKVLVRYLLESHPVIVCTHTGASSSLLDKLN 353
Query: 1071 FDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
FD ++DE Q T P S P++ A + V+ GD QLPP V S + ++I L RL +
Sbjct: 354 FDYAVLDEGSQATEPASWIPILRAERIVIAGDPRQLPPTVLSEDPL---LKIPLMERLLD 410
Query: 1131 EHPQA--ISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ L +QYRM I N Y RL G I + + S +P
Sbjct: 411 RMNSVGRVYLLDTQYRMTDPIQSFPNRRFYAGRLVSG---IPEEERSTNPFPSETPLFDS 467
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+ +F++T + E +L N EA I + ++++ +D+ +I+PY
Sbjct: 468 SF------VFIDTSGTDSGEELFDASLGNRWEAEFTITILKRILESGWSPEDLVLISPYR 521
Query: 1249 SQANLIRHSL------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWH 1302
Q L+ L V +EI T+D +QGR+K ++ S VRS+ L +
Sbjct: 522 YQRFLLEEILRKELPIDVEKIEIETVDSFQGREKKGVIFSLVRSNS---EGNIGFLSEER 578
Query: 1303 RINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
R NV +TRAK+ L+++G TL + + LI +
Sbjct: 579 RWNVGMTRAKRLLVLIGDGSTLGEQEFFQDLIQEA 613
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 154 bits (388), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 419 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYHLA 477
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 478 KINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 537
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 538 NIELVKLNQLKAELGELSSQDEKKYKQLVRAAEREILSNADVICCTCVGAGDPRLAKFKF 597
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 598 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 657
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 658 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 710
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 711 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 766
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 767 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 823
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 824 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 856
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 207/442 (46%), Gaps = 63/442 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 419 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 477
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQ--KHCLSAMNINSVE-------- 1042
L ++ + VR+ R +V +H++++ + M +N ++
Sbjct: 478 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELMKLNQLKSELGELSS 537
Query: 1043 EIKKRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ +KRL Q+ V+ TC+G +P L KF ++DE+ Q+ P + P
Sbjct: 538 QDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIP 597
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
L+ K VLVGDH QL P++ + +A + G+ SLF RL I L QYRM +
Sbjct: 598 LVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQYRMHPCL 656
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNTDMLPAY 1207
E + + Y L G I + V PW P P++F +
Sbjct: 657 SEFPSNMFYEGSLQNGISSIERLRRDVD-----FPW------PIMDNPMMFWSNLGNEEI 705
Query: 1208 EAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS----- 1262
A LN EA + KI K ++ +DIGIITPY Q + I S+ +
Sbjct: 706 SASGTSYLNR-TEATNVEKIVTRFFKAGVQPQDIGIITPYEGQRSYIVSSMQANGTFKKE 764
Query: 1263 ----VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMV 1318
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK L ++
Sbjct: 765 HYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAKYGLAIL 821
Query: 1319 GSCRTLSKVPLLKLLINKVGEQ 1340
G+ + LSK PL L+ E+
Sbjct: 822 GNPKVLSKHPLWNCLLQHFKER 843
>gi|330944918|ref|XP_003306458.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
gi|311316071|gb|EFQ85482.1| hypothetical protein PTT_19600 [Pyrenophora teres f. teres 0-1]
Length = 674
Score = 154 bits (388), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 216/484 (44%), Gaps = 99/484 (20%)
Query: 933 DPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASIL 992
+P W + SLND Q+ AI L +++ ALI G PGTGKT T++ + LL + +L
Sbjct: 200 NPLYKLEWIDASLNDSQQEAIRFALASREVALIHGPPGTGKTHTLIELILQLLKQKLRLL 259
Query: 993 LTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINS-----VEEIKKR 1047
+ +N +VDN++ +L S + VR+G + + H L + S V++++K
Sbjct: 260 VCGPSNISVDNIVERLASHKVPMVRLGHPARLLPSVLSHSLDVLTRTSEAAALVQDVRKE 319
Query: 1048 LD----------------QV--------------------------KVVAVTCLGITNPL 1065
+D Q+ KVV T G
Sbjct: 320 MDDKQSSIRKTRNAKERRQIYTELKELRQEFREREKGCVNNLVSGSKVVLATLHGAGGFH 379
Query: 1066 LTDKKFDVCIMDEAGQTTLPVSLGPLMF--ASKFVLVGDHYQLPPLVQS----------- 1112
L ++FDV I+DEA Q PL++ ASK VL GDH QLPP ++S
Sbjct: 380 LKGQEFDVVIVDEASQALEAQCWVPLLWVKASKLVLAGDHLQLPPTIKSLNSKESKAAKK 439
Query: 1113 --------TEARENG-----MEISLFRRLSEEH-PQAISALQSQYRMCQGIMELSNALIY 1158
T+ E +E +LF RL H P L +QYRM + IM + +Y
Sbjct: 440 DAKKSKDETDEAEKSTSSMTLETTLFDRLLALHGPSIKRMLTTQYRMHERIMRFPSDELY 499
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE--------AK 1210
+L IA +K L +++ + P++F +T E K
Sbjct: 500 DSKL------IAADLVKERLLKDLPYEVEDTEDSREPLVFWDTQGGEFPEKIEDSGVIGK 553
Query: 1211 DHQTLN------NPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSS 1262
+ +N N EA L+ L+ ++ +DI ++TPYN+Q L+ L +
Sbjct: 554 GGKGMNVGDSKSNEAEAALVKMHVSNLISAGVKAEDIAVVTPYNAQLALLGGMLKEAYPG 613
Query: 1263 VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCR 1322
+E+ ++D +QGR+K+ ++VS VRS+ LG+ R+NVA+TR K+ L ++G
Sbjct: 614 IELGSVDGFQGREKEAVIVSTVRSNSKHE---VGFLGEKRRLNVAMTRPKRHLCVIGDSE 670
Query: 1323 TLSK 1326
T+SK
Sbjct: 671 TISK 674
>gi|111219429|ref|XP_646844.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
gi|90970905|gb|EAL73051.2| hypothetical protein DDB_G0268924 [Dictyostelium discoideum AX4]
Length = 1772
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/414 (32%), Positives = 205/414 (49%), Gaps = 43/414 (10%)
Query: 934 PALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--I 991
P+L + LN Q +I L+ K LI G PGTGKT+T+ + + LL I
Sbjct: 1232 PSLLRSMCIQELNTSQFNSIETSLSTKGITLIQGPPGTGKTTTIYYLLSILLAINPEFKI 1291
Query: 992 LLTSYTNSAVDNL--------LIKLKSQSI--DFVRIGRHEVVHKEIQKHCLSAMNINSV 1041
L+ ++++VD + LI L + + VRIG+ E + + H +S N +
Sbjct: 1292 LVCGPSHASVDEIAKRCSKKKLIGLDGKPYLPNMVRIGKKENISPDC--HSISIFN-KTQ 1348
Query: 1042 EEIKKRLDQVKVVAVTCLGITNPLLTDK-KFDVCIMDEAGQTTLPVSLGPLMFAS--KFV 1098
E + + +V T G + + + + D+ ++DE+ Q+T P S+ PL + K +
Sbjct: 1349 REKSDSIYRASIVFSTLSGSGSETVKNNFRADIILVDESTQSTEPSSIIPLCIGNIEKLI 1408
Query: 1099 LVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIY 1158
LVGD QLPP + STE+ ENG+ ISLF RLS+ P + L QYRM I + Y
Sbjct: 1409 LVGDPLQLPPTIFSTESAENGLNISLFERLSKVLP--VEMLHVQYRMHPTISRFPSNQFY 1466
Query: 1159 GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNP 1218
DRL G N K V + + +K P+ F D++ + E ++L N
Sbjct: 1467 RDRLLDGD----NVKSLVYNQHNFHSDIKYG-----PIRFY--DVIDSKEESGKRSLKNK 1515
Query: 1219 VEACLIAKITQELVKNEIEGK--DIGIITPYNSQANLIRHSLSVS----SVEIHTIDKYQ 1272
+E ++ + ++LV++ E K GIITPY Q + I+ ++E TID +Q
Sbjct: 1516 LEITMVFTLIKKLVQDYPECKKFSFGIITPYKLQKSEIKEQHKQFNYPLNIETSTIDGFQ 1575
Query: 1273 GRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSK 1326
G +KD I++S VRS L D RINVALTRAK L ++G+ + L K
Sbjct: 1576 GSEKDIIILSCVRSER------IGFLSDRRRINVALTRAKFGLFVIGNSKLLKK 1623
>gi|134114680|ref|XP_774048.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256678|gb|EAL19401.1| hypothetical protein CNBH0940 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 748
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 215/497 (43%), Gaps = 115/497 (23%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--------I 991
W + LND Q+ +I L A + A I G PGTGKT T+V + LL R AS I
Sbjct: 231 WFGQHLNDSQKESIKFCLKANEVACIHGPPGTGKTHTLVELIFQLLSRPASPNTTLPPRI 290
Query: 992 LLTSYTNSAVDNLLIKLKSQSID-----------FVRIGRHEVVHKEIQKHCLSAMNINS 1040
L+T+ +N A+DNLLI+L + F+R+G VH+++ K L N
Sbjct: 291 LITTPSNLALDNLLIRLHILAQQPPYSSLLPRNSFLRMGHPTRVHRDLVKETLDWKAANG 350
Query: 1041 -----------------------------------------VEEIKKRLDQ--------- 1050
V E++K Q
Sbjct: 351 DQGELLKDVGKEMQGHLDALGKKRGEKGAVKGKERGKKWGEVRELRKEYRQREGKVVKTV 410
Query: 1051 ---VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
++V TC + L + FDVCI+DEA Q V P++ + K +L GD QLP
Sbjct: 411 VNGAQIVLATCHSAGSRQLNNMIFDVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLP 470
Query: 1108 PLVQSTE-----------------------ARENGMEISLFRRLSEEHPQAIS-ALQSQY 1143
P + S E +E +LF RL + + I LQ QY
Sbjct: 471 PTIMSKENAPPLKDLQEAIDQIKLGDSPSLKSPRTLETTLFERLEKLYGPGIKRVLQVQY 530
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS-SCSPWLKEALNPCRPVIFVNTD 1202
RM + I + +Y L + +++ + S +K+ L P V+F +T
Sbjct: 531 RMNEHIAVFPSETLYESALISDASVAKRTLLELPSVKDKTSEDVKDDLEPT--VVFFDTA 588
Query: 1203 MLPAYEAKD-----------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
YE + + +N EA ++A+ ++L+ I +IGI+TPY +Q
Sbjct: 589 DCEFYERTEGDGEATKSSIGEGSKSNENEAEIVARWARKLISLGIPPIEIGIVTPYQAQV 648
Query: 1252 NLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
LI L + I ++D QG++++ I++S VRS NP + LG++ R+NVA+T
Sbjct: 649 TLISSLLHEEYPEMTIGSVDGLQGQEREAIILSLVRS--NP-SGEVGFLGEYRRLNVAMT 705
Query: 1310 RAKKKLIMVGSCRTLSK 1326
RAK++L +VG +T+SK
Sbjct: 706 RAKRQLCVVGDSKTVSK 722
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Brachypodium
distachyon]
Length = 1267
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 203/444 (45%), Gaps = 67/444 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V + +G +L+ + +N AVD
Sbjct: 504 LNASQVLAVKSVLQ-KPVSLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQ 562
Query: 1004 LLIKLKSQSIDFVRIG-----------RHEVVHKEI---------QKHCLSAMN-----I 1038
L K+ S + VR+ H +H ++ + H L + +
Sbjct: 563 LAEKISSTGLKVVRLCAKSREAVSSPVEHLTLHYQVRHLDTSEKSEMHKLQQLKDEQGEL 622
Query: 1039 NSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
+S +E K + L V+ TC+G +P L++ +F ++DE+ Q T P L
Sbjct: 623 SSSDEKKYKALKRATEREILQSADVICCTCVGAGDPRLSNFRFRQVLIDESTQATEPECL 682
Query: 1089 GPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQ 1147
PL+ K VLVGDH QL P++ +A G+ SLF RL + LQ QYRM
Sbjct: 683 IPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVILGVKPFR-LQVQYRMHP 741
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCS---PWLKEALNPCRPVIFVNTDML 1204
+ E + Y L G + V++ S PW P RP+ F +
Sbjct: 742 CLSEFPSNCFYEGTLQNG--------VTVNERQSTGIDFPWPV----PNRPMFFYVQMGV 789
Query: 1205 PAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS----- 1259
A LN EA + KI +++ + IG+ITPY Q I + +S
Sbjct: 790 EEISASGTSYLNR-TEAANVEKIVTTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGSL 848
Query: 1260 ----VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKL 1315
+E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA+ +
Sbjct: 849 RQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQ---GIGFLNDPRRLNVALTRARYGI 905
Query: 1316 IMVGSCRTLSKVPLLKLLINKVGE 1339
+++G+ + LSK PL L+ E
Sbjct: 906 VVLGNPKVLSKQPLWNSLLTHYKE 929
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 153 bits (387), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 419 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYHLA 477
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR---------------HEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 478 KINGGQVLVCAPSNVAVDQLCERIHKTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 537
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 538 NIELVKLNQLKAELGELSSQDEKKYKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 597
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 598 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 657
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 658 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 710
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 711 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 766
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 767 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 823
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 824 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 856
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 424 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYNLA 482
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR---------------HEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 483 KINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 542
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 543 NIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 602
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 603 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 662
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 663 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 715
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 716 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 771
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 772 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 828
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 829 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 861
>gi|237709285|ref|ZP_04539766.1| DNA helicase [Bacteroides sp. 9_1_42FAA]
gi|229456670|gb|EEO62391.1| DNA helicase [Bacteroides sp. 9_1_42FAA]
Length = 1113
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 167/570 (29%), Positives = 257/570 (45%), Gaps = 100/570 (17%)
Query: 824 LRSGDYVIL---STESDRLA---VASGLITEISRFHVSVSFSKPLRLPGRNSSS-DADSL 876
R+GD V+L + +SD + V G I +I+ + + LR RN S DS
Sbjct: 587 FRTGDVVVLYERNHDSDNVTNKMVFKGNIEQITDTELRIR----LRATQRNVSVFPPDSR 642
Query: 877 LHEVWRIDKDEIMTSFSVMRYNLVQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPAL 936
+ ++ D + T+F M Y + FL + +++ R +++ P FDS S D A+
Sbjct: 643 ----YAVEHDTMDTTFRSM-YLGLSAFLDA--NTERRELLLGQRPPCFDS----SFDEAI 691
Query: 937 SYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--ILLT 994
+ DD R +K A+DY L++G PGTGKTS + + +S ILL
Sbjct: 692 A------QAGDDFERVALKAQAARDYFLLVGPPGTGKTSRALRRMVEHFYATSSMQILLL 745
Query: 995 SYTNSAVDNLLIKLKS--QSIDFVRIGRHEVVHKEIQKHCLSAM--NINSVEEIKKRLD- 1049
+YTN AVD + L S ID++R+G + H L + NS E+ R+
Sbjct: 746 AYTNRAVDEICQSLSSITSGIDYIRVGSELSCDVRFRGHLLENILAECNSRREVNTRMTD 805
Query: 1050 -QVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPL--MFA------SKFVLV 1100
+V V V + L K+FDV I+DEA Q P LG L FA KF+L+
Sbjct: 806 CRVYVGTVASIAAKAELFKLKRFDVAIVDEATQILEPQLLGILCAKFADERNAVGKFILI 865
Query: 1101 GDHYQLPPLVQS----TEARENGM-EISLFR------------RLSEEHPQAISALQSQY 1143
GDH QLP ++ +E + G+ ++ LF RL EE P+AI L Q
Sbjct: 866 GDHKQLPAVILQNSGHSEVHDEGLRKVGLFNLKDSLFERLYRFRLKEESPKAIDMLCRQG 925
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDM 1203
RM G+ N Y RL + P E + PV F+ ++
Sbjct: 926 RMHPGVAFFPNKAFYAGRLE----------------ALGLPHQLEHIEA--PVRFIPSEQ 967
Query: 1204 -LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKD----IGIITPYNSQANLIRHSL 1258
L + K N EA ++A + +E+ E D +G+ITPY SQ LIR L
Sbjct: 968 DLESISGK-----TNQYEARIVAGLAREVYLAYEEEFDPNRTLGVITPYRSQIALIRKEL 1022
Query: 1259 ------SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGD-----WHRINVA 1307
++S + I T+++YQG ++D I+ SF + +L + ++NVA
Sbjct: 1023 QTLAIPALSRISIDTVERYQGSERDVIIYSFCVNHLYQLRFLPNLTEEDGVQIDRKLNVA 1082
Query: 1308 LTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
LTRA+K+L + G L+ + + L+ +
Sbjct: 1083 LTRARKQLFITGVPEILNHNSIYQHLLKTI 1112
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 420 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYNLA 478
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGR---------------HEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 479 KINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 538
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 539 NIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 598
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 599 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 658
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 659 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 711
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 712 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 767
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 768 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 824
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 825 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 857
>gi|254826809|ref|NP_060862.3| prematurely terminated mRNA decay factor-like [Homo sapiens]
gi|119626686|gb|EAX06281.1| hCG21296, isoform CRA_c [Homo sapiens]
Length = 2104
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 187/401 (46%), Gaps = 68/401 (16%)
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
R +L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K
Sbjct: 1687 RPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLK 1746
Query: 1046 KR-------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ L QV+VV VTC P + D KF V
Sbjct: 1747 ELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVV 1806
Query: 1075 IMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEE 1131
++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+E +LF RL
Sbjct: 1807 VLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLM 1866
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ I L++QYR I ++N L Y L G EI SP L+
Sbjct: 1867 GHKPI-LLRTQYRCHPAISAIANDLFYKGALMNGVTEIER-----------SPLLEWLPT 1914
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
C F N L E + + +N EA K+ Q L+ + I G IG+IT Y SQ
Sbjct: 1915 LC----FYNVKGLEQIERDN--SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM 1968
Query: 1252 NLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ H LS + +V++ T+D +QG +K+ I++S VR+ + + R
Sbjct: 1969 YKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKR 2022
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+NVALTR K+ L++VG+ L K L +I G + G+
Sbjct: 2023 MNVALTRGKRHLLIVGNLACLRKNQLWGRVIQHCEGREDGL 2063
>gi|452824984|gb|EME31983.1| DNA helicase, putative [Galdieria sulphuraria]
Length = 907
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 221/486 (45%), Gaps = 104/486 (21%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVDN- 1003
LN Q +A +I G PGTGKT+T+V ++ LL RG ++L+ + +N AVDN
Sbjct: 202 LNSSQNQACFMGTWKYPITVIHGPPGTGKTTTLVALIRKLLQRGETLLVCAPSNVAVDNV 261
Query: 1004 --LLIKLKSQSIDFVRIGRHEVVHKEIQKHCLS---------------AMNINSVE---- 1042
+LIK K I +RIG + E+ K+ ++ M + SVE
Sbjct: 262 MEMLIK-KEPHISALRIGHPARYNSELYKYSMAYQMKENDQGKLLKDIEMEMVSVERSLE 320
Query: 1043 --------------------EIKKR--------LDQVKVVAVTCLGI----------TNP 1064
E K+R Q +++ TC G +
Sbjct: 321 HAKDRHQQYEWKKVRKSLQKEWKERKSLAMCQSFQQTQIIFCTCAGAGDWTMESLFSNHS 380
Query: 1065 LLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISL 1124
L D I+DEAGQ + PL+ + +L GD +QLPP V S A ENG+ S+
Sbjct: 381 RLGRNGLDTIIIDEAGQALESLCWIPLLKGKRAILAGDPFQLPPTVLSQRAIENGLAKSI 440
Query: 1125 FRRLSEEHPQ----AISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLS 1180
R+ +H Q +S LQ QYRM I E S+ Y LS D + + DL
Sbjct: 441 LDRIF-QHKQLEQSIVSVLQIQYRMHLCISEWSSHTFYRGLLSPDKDVECHL---LCDL- 495
Query: 1181 SCSPWLKEALNPCRPVIFVNT---------------------DMLPAYEAKDHQTLNNPV 1219
P ++ N P+++++T L YE+K ++ N V
Sbjct: 496 ---PGVRRDRNTEIPLLWIDTAGCDCIEETESSFADEQTDSFAFLLGYESKRNR---NEV 549
Query: 1220 EACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS--VEIHTIDKYQGRDKD 1277
+ C + +EL+ ++E K IGII+PY +Q +R ++ S +EI T+D +QGR+K+
Sbjct: 550 QLCF--QHLEELLDAKVEPKQIGIISPYAAQIRELRQRIAKLSEEIEISTVDGFQGREKE 607
Query: 1278 CILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
I++S VRS++ L D+ RINVA+TRA++ + ++G+ + K +L L++
Sbjct: 608 AIILSLVRSNDIQE---LGFLTDYRRINVAITRARRHICIIGNSDMMEKDSVLSQLVSYC 664
Query: 1338 GEQSGI 1343
E I
Sbjct: 665 FENGEI 670
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 138/453 (30%), Positives = 208/453 (45%), Gaps = 59/453 (13%)
Query: 926 SGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL 985
+G + +Q P + LN Q A+ VL K +LI G PGTGKT T + + L
Sbjct: 403 AGPMRTQMPKKFSVPGLPDLNSSQTNAVKSVLQ-KPLSLIQGPPGTGKTVTSANIIYNLA 461
Query: 986 -MRGASILLTSYTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVHKEIQ 1029
+ G +L+ + +N AVD L ++ + VR+ HE VH
Sbjct: 462 KINGGQVLVCAPSNVAVDQLCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVHNNDS 521
Query: 1030 KHCLSAMN--------INSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKF 1071
L +N ++S +E K + L V+ TC+G +P L KF
Sbjct: 522 NIELVKLNQLKAELGELSSQDEKKFKQLVRAAEKEILSNADVICCTCVGAGDPRLAKFKF 581
Query: 1072 DVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE 1130
++DE+ Q+ P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL
Sbjct: 582 RTVLIDESTQSAEPECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVI 641
Query: 1131 EHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEAL 1190
I L QYRM + E + + Y L G E + +K D PW A
Sbjct: 642 LGCAPIR-LNVQYRMHPCLSEFPSNMFYDGSLQNGVTE-SERLLKDVDF----PW-PVAH 694
Query: 1191 NPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ 1250
NP ++F + A LN EA + KI K ++ IGIITPY Q
Sbjct: 695 NP---MMFWSNLGNEEISASGTSYLNR-TEAANVEKIVTRFFKAGVKPSSIGIITPYEGQ 750
Query: 1251 ANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDW 1301
+ + S+ + +E+ ++D +QGR+KD I++S VRS+++ L D
Sbjct: 751 RSYVVSSMQATGTFKKELYKEIEVASVDAFQGREKDYIVLSCVRSNDHQ---GIGFLSDP 807
Query: 1302 HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
R+NVALTRAK L+++G+ + LSK PL L+
Sbjct: 808 RRLNVALTRAKYGLVILGNPKVLSKHPLWNYLL 840
>gi|355749514|gb|EHH53913.1| hypothetical protein EGM_14627, partial [Macaca fascicularis]
Length = 1042
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 180/383 (46%), Gaps = 67/383 (17%)
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
R +L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K
Sbjct: 625 RPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLK 684
Query: 1046 KR-------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ L QV+VV VTC P + D KF V
Sbjct: 685 ELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVV 744
Query: 1075 IMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEE 1131
++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+E +LF RL
Sbjct: 745 VLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLM 804
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ I L++QYR I ++N L Y L G EI SP L+
Sbjct: 805 GHKPI-LLRTQYRCHPAISAIANDLFYKGTLMNGVTEIER-----------SPLLEWLPT 852
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
C F N L E + + +N EA K+ Q L+ + I G IG+IT Y SQ
Sbjct: 853 LC----FYNVKGLEQIERDN--SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM 906
Query: 1252 NLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ H LS + +V++ T+D +QG +K+ I++S VR+ + + R
Sbjct: 907 YKLCHLLSAVDFGHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKR 960
Query: 1304 INVALTRAKKKLIMVGSCRTLSK 1326
+NVALTR K+ L++VG+ L K
Sbjct: 961 MNVALTRGKRHLLIVGNLACLRK 983
>gi|168051009|ref|XP_001777949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670709|gb|EDQ57273.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 791
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 126/459 (27%), Positives = 210/459 (45%), Gaps = 73/459 (15%)
Query: 942 EKSLNDDQRRAIIKVLTAKDYALIL-GMPGTGKTSTMVHAVKALLMRGASILLTSYTNSA 1000
E L++ Q+RAI L K +++ G PGTGKTS + ++ +MRG +L T+ TN+A
Sbjct: 313 EVRLDESQKRAIEMGLDRKRPVVVIQGPPGTGKTSVVTELIEKAVMRGERVLATAPTNAA 372
Query: 1001 VDNLLIKLKSQSIDFVRIG-------------------------RHEVVHKEIQ-----K 1030
VDN++ +L + ++ VR+G R ++V + +
Sbjct: 373 VDNIVERLANAGLNVVRVGNPARVAPAVCSRSLSFIVDKSLTTFRGDLVRRRANLRSDLR 432
Query: 1031 HCLS----AMNINSV-------------EEIKKRLDQVKVVAVTCLGITNPLLTDKK-FD 1072
CL A I V E I L +V+ T G +PL+ ++ FD
Sbjct: 433 ECLDNDSVAAGIRQVLKQLGKSLKQKEKEAINDALSSAQVILCTNTGAGDPLIRKQEAFD 492
Query: 1073 VCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEH 1132
+ ++DEA Q P PL+ + VL GD QL P + S A + G+ +SL R H
Sbjct: 493 LVVVDEAAQAIEPSCWIPLLQGRRCVLAGDASQLAPTIMSRTALDGGLGVSLMERAGNLH 552
Query: 1133 PQAISA-LQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+S L +QYRM I + ++ +YG L +A S L +P +K+
Sbjct: 553 SGLLSTMLSTQYRMHSAIADWASHEMYGGSLR-------SAPAVASHLLRDTPGVKDTPV 605
Query: 1192 PCRPVIFVNT-----DMLPAYEAK----DHQTLNNPVEACLIAKITQELVKNEIEGKDIG 1242
P++ ++T ++P E + + N EA ++ + L+ +E I
Sbjct: 606 TKVPMLLLDTRLPFGSLIPGCEERLDPAGTGSFYNEGEADIVVDHIRALLATGVEPSSIA 665
Query: 1243 IITPYNSQANL----IRHSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLL 1298
+ +PY +Q L I V++ ++D +QGR+ D ++VS VRS+ L
Sbjct: 666 VQSPYMAQVQLLCDRIEEIPGAEGVQVASVDSFQGREADAVVVSMVRSNNIG---VVGFL 722
Query: 1299 GDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV 1337
GD R+NVA+TRA+K + +V T+S+ L+ L+ +
Sbjct: 723 GDNRRMNVAVTRARKHVTIVCDSTTVSRNSFLQRLLQHI 761
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago hordei]
Length = 1091
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 203/445 (45%), Gaps = 61/445 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V L M ++L+ + +N AVD
Sbjct: 483 LNHSQVNAVKSVLQ-KPLSLIQGPPGTGKTVTSATIVYQLSKMNPGAVLVCAPSNVAVDQ 541
Query: 1004 LLIKLKSQSIDFVRIGR---------------HEVV-----HKEIQKHCLSAMN----IN 1039
L K+ + VR+ HE V H E+QK + N ++
Sbjct: 542 LCEKIHLTGLKVVRLSAKSREALDSPISFLTLHEQVANNDTHIELQK-LIQLKNEQGELS 600
Query: 1040 SVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
S +E K + L V+ TC+G +P L+ KF ++DEA Q P +
Sbjct: 601 SSDERKYKALTRACEKEILSTADVICCTCVGCGDPRLSKIKFRTVLVDEATQAAEPEVMI 660
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PL+ K V VGDH QL P++ + +A G+ SLF RL + I LQ QYRM
Sbjct: 661 PLVMGCKQVVFVGDHLQLGPVIMNKKAARAGLSQSLFERLIMLGNRPIR-LQVQYRMHPC 719
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ E + + Y L G + +V D PWL P+ F
Sbjct: 720 LSEFPSNMFYEGTLQNGVTAPERLRREV-DFPWPVPWL--------PMFFFQNLGQEEIS 770
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV-------- 1260
+ LN EA + KI K ++ IGI+TPY Q + I + + +
Sbjct: 771 SSGTSFLNR-TEASNVEKIVTRFFKAGVKPSQIGIVTPYEGQRSYIVNHMQLHGSLKKEL 829
Query: 1261 -SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
VE+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRA+ L+++G
Sbjct: 830 YKQVEVASVDAFQGREKDYIILSCVRSNEHQ---GIGFLSDPRRLNVALTRARYGLVILG 886
Query: 1320 SCRTLSKVPLLKLLINKVGEQSGIL 1344
+ + L+K PL L+ E+ ++
Sbjct: 887 NPKVLNKHPLWHYLLVHYKEKGCLV 911
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 204/438 (46%), Gaps = 63/438 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A VL + +LI G PGTGKT T V L + +++ + +N AVD
Sbjct: 364 LNHSQESAARAVLQ-RPLSLIQGPPGTGKTVTSATIVYQLAQQHLGQVIVCAPSNVAVDQ 422
Query: 1004 LLIKLKSQSIDFVRIG----------------RHEVVH---------KEIQ--KHCLSAM 1036
L K++ + VR+ ++V H K++Q K L +
Sbjct: 423 LAEKIERTGLRVVRLAARSREHVASPVEHLTLHYQVAHLDSPETAEFKKLQQLKDELGEL 482
Query: 1037 NINSVEEIKKRLDQ---------VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVS 1087
+ N E KRL + VV VT +G +P L D +F +MDE+ Q T P
Sbjct: 483 SSND-ERRHKRLKRKIEREIIAAADVVCVTAVGAGDPRLADFRFRQVLMDESTQATEPEC 541
Query: 1088 LGPL-MFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMC 1146
L PL M A + V+VGDH QL P+V S +A G+ S+F RL Q I LQ QYRM
Sbjct: 542 LIPLIMGAKQVVMVGDHCQLGPVVTSKKAARAGLGQSMFERLISLGVQPIR-LQVQYRMH 600
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ E + Y L G +A A ++ + PW NP P++F +
Sbjct: 601 PCLSEFPSNAFYEGALQNG---VAAADRLLTHVD--FPW----PNPTSPMMFWSMTGAEE 651
Query: 1207 YEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS------- 1259
A LN EA + K+ L++ ++ IG++TPY Q + ++
Sbjct: 652 ISASGTSYLNR-AEAAGVEKVVTHLLRAGVDPGRIGVVTPYEGQRAYVSQHMTRAGVLAT 710
Query: 1260 --VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIM 1317
VE+ ++D +QGR+KD I++S VRS+E L D R+NVA+TRA+ L++
Sbjct: 711 RLYGEVEVASVDAFQGREKDFIILSCVRSNE---KTGIGFLNDPRRLNVAMTRARSGLVI 767
Query: 1318 VGSCRTLSKVPLLKLLIN 1335
+G+ + LS+ L L+N
Sbjct: 768 LGNPKVLSRQRLFHDLLN 785
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 210/446 (47%), Gaps = 67/446 (15%)
Query: 939 IWSEKSLNDDQRRAIIKVLTA--KDYALILGMPGTGKTSTMVHAVKALLMRGA-SILLTS 995
++S L D R + V A + +LI G PGTGKT T V L+ + A ++L+ +
Sbjct: 453 LYSAPHLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKQHAGTVLVCA 512
Query: 996 YTNSAVDNLLIKLKSQSIDFVRI---------------GRHEVVH--------KEIQKHC 1032
+N+AVD L K+ ++ VR+ H + K++Q+
Sbjct: 513 PSNTAVDQLTEKIHRTNLKVVRVCAKSREAIDSPVSFLALHNQIRNMETNSELKKLQQLK 572
Query: 1033 LSAMNINSVEEIKKR----------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQT 1082
++S +E + R L+ V+ TC+G + L+ KF ++DE+ Q+
Sbjct: 573 DETGELSSADEKRYRSLKRGTENQLLEAADVICCTCVGAGDVRLSRIKFTSILIDESMQS 632
Query: 1083 TLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQS 1141
T P + P++ +K +LVGDH QL P+V +A G+ SLF RL + L+
Sbjct: 633 TEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFR-LEV 691
Query: 1142 QYRMCQGIMELSNALIYGDRLS---CGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
QYRM + + + Y L C D ++K+ PW + P RP+ F
Sbjct: 692 QYRMHPELSQFPSNFFYEGSLQNGVCAEDR----RLKLD-----FPWPQ----PERPMFF 738
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQ-ANLIR-- 1255
+ T LN EA + KIT +K I+ + IGIITPY Q A L++
Sbjct: 739 LVTQGQEEIAGSGTSFLNR-TEAANVEKITTRFLKAGIKPEQIGIITPYEGQRAYLVQYM 797
Query: 1256 ------HSLSVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
HS +EI ++D +QGR+KD I++S VRS+E L D R+NVALT
Sbjct: 798 QYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQ---GIGFLNDPRRLNVALT 854
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLIN 1335
RAK +I+VG+ + L+K L L+N
Sbjct: 855 RAKYGIIIVGNPKVLAKQQLWNHLLN 880
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 135/455 (29%), Positives = 203/455 (44%), Gaps = 81/455 (17%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L+ + +L+ + +N AVD
Sbjct: 454 LNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHLVKQNNGQVLVCAPSNIAVDQ 512
Query: 1004 LLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + L N+ SV E++K L Q+K
Sbjct: 513 LTEKIHKTGLKVVRLCAKSREAIDSPVSFLALHNQIRNMESVPELQK-LQQLKDETGELS 571
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
V+ TC+G +P L +F ++DE+ Q T P +
Sbjct: 572 STDEKRYRSLKKQCEKELLQHADVICCTCVGTGDPRLAKMQFRSVLIDESTQATEPECMI 631
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
P++ + +LVGDH QL P+V +A G+ SLF RL + I LQ QYRM
Sbjct: 632 PVVLGCRQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPIR-LQVQYRMHPA 690
Query: 1149 IMELSNALIY----------GDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIF 1198
+ + + Y GDR+ G D PW + +P+ F
Sbjct: 691 LSAFPSNIFYEGSLQNGVAPGDRVRKGLD---------------IPWPQGD----KPMFF 731
Query: 1199 VNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL 1258
T + LN EA + KI +++ ++ + IGIITPY Q I +
Sbjct: 732 YTTSGQEEISSSGTSYLNR-TEAANVEKIATRFLRSNVKPEQIGIITPYEGQRAYIVQYM 790
Query: 1259 SVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALT 1309
S +E+ ++D +QGR+KD I++S VRS+E+ L D R+NVALT
Sbjct: 791 QYSGSLNKKLYQEIEVASVDAFQGREKDFIILSCVRSNEHQ---GIGFLNDPRRLNVALT 847
Query: 1310 RAKKKLIMVGSCRTLSKVPLLKLLINKVGEQSGIL 1344
RAK +I+VG+ + LSK PL L+ EQ ++
Sbjct: 848 RAKYGIIIVGNPKVLSKQPLWNHLLTYYKEQKCLV 882
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 136/439 (30%), Positives = 208/439 (47%), Gaps = 63/439 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRG-ASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V + + +L+T+ +N AVD+
Sbjct: 102 LNTFQMEAVKGVLE-QPLSLIQGPPGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDH 160
Query: 1004 LLIKLKSQSIDFVRIG--RHEVVHKEIQKHCLSAM----------NINSVEEIK------ 1045
L +K+ + + VR+ E V ++ L AM ++ + ++K
Sbjct: 161 LTMKISATGLRVVRLAAKSREAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDIGEL 220
Query: 1046 -----KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSL 1088
KR +K V+ TC+G +P L++ +F ++DEA Q T P L
Sbjct: 221 SSQDEKRFKSLKRQAEREILQAADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECL 280
Query: 1089 GPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL-SEEHPQAISALQSQYRMC 1146
P++ +K V+VGDH QL P+V + +A + G+ SLF RL + L+ QYRM
Sbjct: 281 IPIVQGAKHVVMVGDHRQLGPVVMNKKAAKAGLNNSLFDRLVKSDTKHRPFRLRVQYRMH 340
Query: 1147 QGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPA 1206
+ E + Y L G +A ++ ++S + PW NP +P F L A
Sbjct: 341 PFLSEFPSNEFYEGDLQNG---VAASERQLSSVDF--PWP----NPNKPTFFYIC--LGA 389
Query: 1207 YEAKDHQT-LNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS------ 1259
E T N EA + KI +K + IG+ITPY Q + +
Sbjct: 390 EEISSSGTSYLNRTEASNVEKIVTTFLKAGVLPSQIGVITPYEGQRAYVVSYMQRNGPLR 449
Query: 1260 ---VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLI 1316
VE+ ++D +QGR+KD I++S VRS+E N L D R+NVALTRAK +I
Sbjct: 450 SQLYKDVEVASVDSFQGREKDLIILSCVRSNE---NQGIGFLSDERRLNVALTRAKYGVI 506
Query: 1317 MVGSCRTLSKVPLLKLLIN 1335
++G+ R L+K L L+N
Sbjct: 507 LLGNPRVLAKQTLWNKLLN 525
>gi|74711848|sp|Q6ZU11.1|YD002_HUMAN RecName: Full=Uncharacterized protein FLJ44066
gi|34532402|dbj|BAC86416.1| unnamed protein product [Homo sapiens]
Length = 926
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 187/401 (46%), Gaps = 68/401 (16%)
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
R +L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K
Sbjct: 509 RPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLK 568
Query: 1046 KR-------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ L QV+VV VTC P + D KF V
Sbjct: 569 ELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVV 628
Query: 1075 IMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEE 1131
++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+E +LF RL
Sbjct: 629 VLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLM 688
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ I L++QYR I ++N L Y L G EI SP L+
Sbjct: 689 GHKPI-LLRTQYRCHPAISAIANDLFYKGALMNGVTEIER-----------SPLLEWLPT 736
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
C F N L E + + +N EA K+ Q L+ + I G IG+IT Y SQ
Sbjct: 737 LC----FYNVKGLEQIERDN--SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM 790
Query: 1252 NLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ H LS + +V++ T+D +QG +K+ I++S VR+ + + R
Sbjct: 791 YKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKR 844
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+NVALTR K+ L++VG+ L K L +I G + G+
Sbjct: 845 MNVALTRGKRHLLIVGNLACLRKNQLWGRVIQHCEGREDGL 885
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 153 bits (386), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 197/440 (44%), Gaps = 60/440 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L + +L+ + +N+AVD
Sbjct: 309 LNHSQVFAVKTVLQ-RPLSLIQGPPGTGKTVTSASIVYHLNKIHQKKVLVVAPSNTAVDQ 367
Query: 1004 LLIKLKSQSIDFVRI--------------------GRHEVVHKEIQK--------HCLSA 1035
L K+ + VR+ +H H E++K LS
Sbjct: 368 LCEKISRTGLKVVRLCARSREALASPVSHLMLHVQAQHVKGHSELRKLQQLKDETGELSQ 427
Query: 1036 MNINSVEEIKKRLDQ-----VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ +K+ L++ VV TC+ + L F ++DE+ Q T P L P
Sbjct: 428 ADEKRYRLLKRELERELLVAADVVCCTCVTAGDQRLERLSFHSVLIDESTQATEPECLIP 487
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
LM + VLVGDH QL P++ +A G+ SLF R + + LQ QYRM +
Sbjct: 488 LMVGCRQVVLVGDHCQLGPVITCKKAANAGLTQSLFERFVLLGIRPMR-LQVQYRMHPAL 546
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
+ + Y L G A + K D PW NP RP+ F T
Sbjct: 547 SAFPSNVFYEGSLQNGV--TAEDRCKQIDF----PWP----NPDRPMFFYCTSGQEEISG 596
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------- 1262
LN EA + KI +++K + IG+ITPY Q + H L S
Sbjct: 597 NGVSYLNR-TEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNSKLY 655
Query: 1263 --VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+EI ++D +QGR+KD I++S VR++EN L D R+NVALTRA+ LI+VG+
Sbjct: 656 QEIEIASVDAFQGREKDYIILSCVRANENQ---GIGFLNDPRRLNVALTRARYGLIVVGN 712
Query: 1321 CRTLSKVPLLKLLINKVGEQ 1340
+ L K PL L++ EQ
Sbjct: 713 PKALCKQPLWNQLLHFYREQ 732
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/443 (29%), Positives = 204/443 (46%), Gaps = 72/443 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKT---STMVHAVKALLMRGASILLTSYTNSAV 1001
LN+ Q A+ KVLTA +LI G PGTGKT S ++H + + +L+ + +N A+
Sbjct: 537 LNESQISAVNKVLTAP-LSLIQGPPGTGKTVISSFIIHHLVKYVKGNDKVLVCTPSNVAI 595
Query: 1002 DNLLIKLKSQSIDFVRIG-----------RHEVVHKEIQKHCLSAMNINSVEEIKKR--- 1047
D L KL + VR+ H +HK++ K L M + +++K
Sbjct: 596 DQLTGKLHEIGLKVVRLSSKLREEVASPVEHLTLHKQVYK--LDQMGDGELGKLRKLKEA 653
Query: 1048 -----------------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
L + V+ TC+G +P L+ +F ++DE+ Q +
Sbjct: 654 FGSLSNEDEKRYIYLRRMMEMAILRKADVICATCVGAGDPRLSQFRFPHILIDESTQASE 713
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSE--EHPQAISALQS 1141
P L PLM +K +LVGDH QL P++ + + G+ SLF RL HP+ ++
Sbjct: 714 PECLIPLMMGAKQVILVGDHRQLGPVLLCKKVVDAGLSQSLFERLISLGHHPERLTI--- 770
Query: 1142 QYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT 1201
QYRM + E + Y +L ++ D S PW + P P+ F N
Sbjct: 771 QYRMHPSLTEFPSNTSYEGQL------VSELSHTDRDSQSKFPWPQ----PKDPMFFFNC 820
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
+ +N EA + KI + ++ IGIITPY Q I + S
Sbjct: 821 TGSEEISSSGTSFINT-TEASICEKIVTKFLELGSLPGQIGIITPYEGQRAYITSHMQKS 879
Query: 1262 ---------SVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
S+E+ ++D +QGR+KD I++S VRS++ L D R+NVALTRA+
Sbjct: 880 GKLNLELYKSIEVASVDSFQGREKDYIILSCVRSNDYQ---GIGFLQDPRRLNVALTRAR 936
Query: 1313 KKLIMVGSCRTLSKVPLLKLLIN 1335
LI++G+ + LSK PL LI+
Sbjct: 937 FGLIILGNAKVLSKDPLWNSLIS 959
>gi|145353588|ref|XP_001421091.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581327|gb|ABO99384.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 466
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 138/466 (29%), Positives = 212/466 (45%), Gaps = 89/466 (19%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL---------MRGASILLTS 995
LN QR A+ L++ A+ G PGTGKT T++ + A + RG +L ++
Sbjct: 10 LNPSQRVAVKSALSS-SLAVWQGPPGTGKTRTLIAYIGAAVHLASIQKRRGRGPIVLASA 68
Query: 996 YTNSAVDNLLIKLKSQS-------IDFVRIGRHEVVHKEIQKHCLSA------------- 1035
+N AVDN+L L +S + VR+G V +Q+ L A
Sbjct: 69 ASNVAVDNILEGLAKESFIVDGRPLRVVRVGAPAKVQPWLQQLTLDAQIALHPLGRQAAA 128
Query: 1036 ----------------------MNINSVEEIKKRLDQVKVVAVTCLGITNPLLTDKKFDV 1073
+ + + + I K +D VV TC+G + LL D F V
Sbjct: 129 MREAIRGQSGPAFARQRKQATQLELTAAKSILKSVD---VVCTTCVGAGDELLEDFTFPV 185
Query: 1074 CIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHP 1133
++DEA Q T P +L L A VLVGD QLPP V S +A + G+++S+F R+ E
Sbjct: 186 AVVDEATQCTEPGALISLTKALSAVLVGDSKQLPPTVVSRDAVDAGLQVSIFERM-ERLG 244
Query: 1134 QAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC 1193
+S L QYRM I E + Y ++ GS + V ++ SP +
Sbjct: 245 VKVSLLDMQYRMHPQIAEFPSLAFYKGKV--GSVPTPQDRPLVPGIAWPSPNV------- 295
Query: 1194 RPVIFVNTDMLPAYEAKDHQTLNNPVEACL-IAKITQELVKNEIEG-KDIGIITPYNSQA 1251
PV FV P A D +L N EA + I + + L ++ G DIG+I+PY +Q
Sbjct: 296 -PVAFVEISA-PESRAPDGNSLYNVGEAKMAIGVVRKLLAAGDLAGPGDIGVISPYAAQV 353
Query: 1252 NLIRHSLSVSS-----------------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCT 1294
++ V +EI ++D +QGR+K+ I++ VRS NP +
Sbjct: 354 RRLQEEYGVGGSPKRNYLDYTEEDKIEELEIRSVDGFQGREKEVIVLCTVRS--NP-SGD 410
Query: 1295 SSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
+ D R+NV +TRAK+ LI++G+ +TLS + + + EQ
Sbjct: 411 IGFVADPRRLNVGITRAKRGLIVLGNRKTLSNNEMWRSWFKWIDEQ 456
>gi|333381115|ref|ZP_08472797.1| hypothetical protein HMPREF9455_00963 [Dysgonomonas gadei ATCC
BAA-286]
gi|332830085|gb|EGK02713.1| hypothetical protein HMPREF9455_00963 [Dysgonomonas gadei ATCC
BAA-286]
Length = 1119
Score = 153 bits (386), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 210/842 (24%), Positives = 356/842 (42%), Gaps = 145/842 (17%)
Query: 579 IEEMAWAPKYGLKGMIDASIRVKIESKRNEINGMILPLEFKTGKIPNGQSSM-----EHR 633
+E + KYG +G +D + N+ G+ +E K+GK P + + H
Sbjct: 334 LEPSFFCEKYGFQGRLD------LLQLSNDETGIDRIIELKSGKPPFPREDVTKIAPNHE 387
Query: 634 AQVILYTLLMSERYLK---HIDSGLLYYLQSDQTQGVMVQRSDLVGLIMRRNEFANDIIK 690
Q +Y L++ + K HI +LY S + G ++ + + + + ++I
Sbjct: 388 TQTAIYRLMIQSVFGKDARHIYPTILY--SSAENAGENIRFAAIYQQLEKEIINVRNLIV 445
Query: 691 AST-------TQQLPPMLRAYGGNKECSGLGNMFDSHIYHLTTAHCSFLRHWDRLIDLEA 743
A+ TQ + + R N+F+ + Y A F+ D+L +LE
Sbjct: 446 ATEHDVYIGDTQHVEKVFR------------NLFNLNNY--GRAPQFFI---DKLAELEK 488
Query: 744 --------------KEMQVVKNEIWCSRGSGGNHFTGCLSSIVLDASNEHQKSYRDNRFV 789
+ ++ + E++ + + T S + + S E ++ D
Sbjct: 489 VIDKATPLERIYFYRYIRFITRELYLQKTGDEGYNTSMSVSALWNTSFEERQDSLD---- 544
Query: 790 YHFVRQHMPSPNLNASDGDSLIGAAIPTKDMDCTLRSGDYVIL----STESDRLA--VAS 843
+ ++ +++ S D +I + KD R G+ IL +E L +
Sbjct: 545 ---LIANLEIEDIDDSGRDMIIRFS-RDKDECVNFREGEICILYPRHKSEESVLTNQILK 600
Query: 844 GLITEISRFHVSVSFSKPLRLPGRNSSSDADSLLHEVWRIDKDEIMTSFSVMRYNLVQLF 903
G + EIS +HV + F R RN S ++ W ++ D + S+S M Y + F
Sbjct: 601 GTVVEISSYHVVLRFRYKQR--NRNLFSR-----YKYWAVEHDRLDHSYSTM-YKSLYAF 652
Query: 904 LQSAQSSQLRRMIVDLEAPRFDSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYA 963
L + + +++ L P L + ++ + Q+ I K L A+DY
Sbjct: 653 LSAPNDK--KELLLGLREPL---------SSTLYELTTDATKEAKQKNIIDKALAAEDYF 701
Query: 964 LILGMPGTGKTSTMVHAVKALLMRG--ASILLTSYTNSAVDNL---LIKLKSQSID---- 1014
LI+G PGTGKTS + G +IL+ +YTN AVD L + + +S D
Sbjct: 702 LIVGPPGTGKTSIFARQLIERFYAGENTNILVMAYTNRAVDELCASICQAFGESEDECDR 761
Query: 1015 FVRIGRHEVVHKEIQKHCL---SAMNINSVEEIKKRLDQVKVVAVTCLGIT-NPLLTD-K 1069
++RIG E+ E +H L + + +E+ + +D ++ T IT P L D K
Sbjct: 762 YIRIG-SELSCGEGYRHRLLQNISYQAGNRKELIRTIDSTRIFVGTLASITGKPELFDLK 820
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEI------- 1122
F++ I+DEA Q P +G L KF+++GDH QL + E + E
Sbjct: 821 NFNIAIIDEASQILEPQIIGLLPLFDKFIMIGDHKQLSTITLQDENKSKVEETVLNDIQL 880
Query: 1123 -----SLFRRL-----SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDE---- 1168
SLF RL + QA L RM + I L N Y + L +D
Sbjct: 881 SDCRESLFERLFHICQKQGWTQAYDTLTYHGRMHEDIASLVNISFYDNMLHAATDRQYKP 940
Query: 1169 IANAKIKVSD-LSSCSPWLKEALNPCRPVIFV-NTDMLPAYEAKDHQTLNNPVEACLIAK 1226
+A SD L S + A P R N+D L EA V LI
Sbjct: 941 LAYQTYDRSDKLQSLIATKRTAFLPVRETDNTNNSDKLNKQEAD--------VVISLIKA 992
Query: 1227 ITQELVKNEIE---GKDIGIITPYNSQANLIRHSL------SVSSVEIHTIDKYQGRDKD 1277
I + N + K IG+ITPY +Q LI+H L ++++ + T+++YQG +D
Sbjct: 993 ILEIYRLNNMAFDTRKTIGVITPYRNQIALIKHKLEETEIPELNNIMVDTVERYQGSQRD 1052
Query: 1278 CILVSFVRSSENPRNCTSSLLGDW---HRINVALTRAKKKLIMVGSCRTLSKVPLLKLLI 1334
I++SF + S+L + ++NVALTRA+++L M+G+ L++ P+ + ++
Sbjct: 1053 IIILSFCFNKPYQLRFFSNLNRERTVDRKLNVALTRAREQLFMIGNDYILNQHPIYREIV 1112
Query: 1335 NK 1336
NK
Sbjct: 1113 NK 1114
>gi|448404212|ref|ZP_21572459.1| Superfamily I DNA and RNA helicase and helicase subunits-like protein
[Haloterrigena limicola JCM 13563]
gi|445663832|gb|ELZ16573.1| Superfamily I DNA and RNA helicase and helicase subunits-like protein
[Haloterrigena limicola JCM 13563]
Length = 752
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 191/420 (45%), Gaps = 50/420 (11%)
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
D+ F + + LN +Q A+ L A I G PGTGKT T+V V+
Sbjct: 324 DTAVTFGDTAGVKSSQQDVELNQEQELAVSCALLADPLFCIHGPPGTGKTRTLVEVVRRS 383
Query: 985 LMRGASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEI 1044
+ G +L+ + +N AVDNL+ + + R +H Q H + V
Sbjct: 384 VEAGDDVLVCADSNQAVDNLVAGSSTATETDDR-----SLHAHAQ-HGAGEFVLRRVNAS 437
Query: 1045 KKRLDQVKVVAVTCLGITNPLLT--------DKKFDVCIMDEAGQTTLPVSLGPLMFASK 1096
+ + V TC G+ + + +++FDV ++DEA Q T S PL A K
Sbjct: 438 RSSNEVVSTQYATCDGLADVVAATNSSAATLEREFDVLVLDEATQATCTASCIPLARADK 497
Query: 1097 FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEE---HPQAISALQSQYRMCQGIMELS 1153
+L GDH QLPP + E E+ +SLF L + + L++QYRM + I
Sbjct: 498 VILAGDHKQLPPFSATEEPPESAAGLSLFEHLYADGGIYEGVGIQLRTQYRMHRDIAWFP 557
Query: 1154 NALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQ 1213
N+ Y L G D A + D S+ FV+ D+ + E DH
Sbjct: 558 NSRFYDRALRQGRDVTA-----LEDRSA----------------FVSYDIGGSEETIDHS 596
Query: 1214 TLNNPVEACLIAKITQELVKN-EIEGKDIGIITPYNSQANLIRHSL-----SVSSVEIHT 1267
N+ E L+A I EL+ + ++ ++G+ITPY +QAN IR L S + + T
Sbjct: 597 KRND-AEVRLVAHIAGELLADADLSSSEVGVITPYTAQANAIRKKLARHIDSGRDISVDT 655
Query: 1268 IDKYQGRDKDCILVSFVRSSENPRNCTSSL---LGDWHRINVALTRAKKKLIMVGSCRTL 1324
ID +QG +K I++S VRS N T L + R+NVA+TRA++ +VG TL
Sbjct: 656 IDSFQGSEKVAIVISLVRS--NAAGETGFLGRPIDGPRRLNVAMTRAQRFCAIVGDWYTL 713
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative [Schistosoma
mansoni]
Length = 1325
Score = 152 bits (385), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 197/441 (44%), Gaps = 62/441 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L + +L+ + +N+AVD
Sbjct: 449 LNHSQVFAVKTVLQ-RPLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQ 507
Query: 1004 LLIKLKSQSIDFVRIG--RHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + + L A N+ E++K L Q+K
Sbjct: 508 LCEKIDRTGLKVVRLCARSREALASPVSRLMLHIQAQNVKGHTELRK-LQQLKDETGELS 566
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
VV TC+ + L F ++DE+ Q T P L
Sbjct: 567 QDDDKRYRVLKRELERELLMAADVVCCTCVTAGDARLERLSFHSVLIDESTQATEPECLI 626
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PLM + VLVGDH QL P++ +A G+ SLF R + I LQ QYRM
Sbjct: 627 PLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLLGIRPIR-LQVQYRMHPA 685
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G A + K D PW NP RP+ F T
Sbjct: 686 LSAFPSNVFYEGSLQNGV--TAEDRCKKIDF----PWP----NPDRPMFFYCTSGQEEIS 735
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
LN EA + KI +++K + IG+ITPY Q + H L S
Sbjct: 736 GNGVSYLNR-TEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNAKL 794
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+EI ++D +QGR+KD I++S VR++EN L D R+NVALTRA+ LI+VG
Sbjct: 795 YQEIEIASVDAFQGREKDYIILSCVRANENQ---GIGFLNDPRRLNVALTRARYGLIVVG 851
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + L K PL L++ +Q
Sbjct: 852 NPKALCKQPLWNQLLHFYRDQ 872
>gi|332820104|ref|XP_517401.3| PREDICTED: uncharacterized protein LOC461442 [Pan troglodytes]
Length = 2104
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 187/401 (46%), Gaps = 68/401 (16%)
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
R +L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K
Sbjct: 1687 RPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLK 1746
Query: 1046 KR-------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ L QV+VV VTC P + D KF V
Sbjct: 1747 ELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVV 1806
Query: 1075 IMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEE 1131
++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+E +LF RL
Sbjct: 1807 VLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLM 1866
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ I L++QYR I ++N L Y L G EI SP L+
Sbjct: 1867 GHKPI-LLRTQYRCHPAISAIANDLFYKGALMNGVTEIER-----------SPLLEWLPT 1914
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
C F N L E + + +N EA K+ Q L+ + I G IG+IT Y SQ
Sbjct: 1915 LC----FYNVKGLEQIERDN--SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM 1968
Query: 1252 NLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ H LS + +V++ T+D +QG +K+ I++S VR+ + + R
Sbjct: 1969 YKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKR 2022
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+NVALTR K+ L++VG+ L K L +I G + G+
Sbjct: 2023 MNVALTRGKRHLLIVGNLACLRKNRLWGRVIQHCEGREDGL 2063
>gi|58271134|ref|XP_572723.1| DNA helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57228982|gb|AAW45416.1| DNA helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 748
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 142/500 (28%), Positives = 218/500 (43%), Gaps = 121/500 (24%)
Query: 940 WSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGAS--------I 991
W + LND Q+ +I L A + A I G PGTGKT T+V + LL R A+ I
Sbjct: 231 WFGQHLNDSQKESIKFCLKANEVACIHGPPGTGKTHTLVELIFQLLSRPAAPNTTLPPRI 290
Query: 992 LLTSYTNSAVDNLLIKLKSQSID-----------FVRIGRHEVVHKEIQKHCLSAMNINS 1040
L+T+ +N A+DNLLI+L + F+R+G VH+++ K L N
Sbjct: 291 LITTPSNLALDNLLIRLHILAQQPPYSSLLPRNSFLRMGHPTRVHRDLVKETLDWKAANG 350
Query: 1041 -----------------------------------------VEEIKKRLDQ--------- 1050
V E++K Q
Sbjct: 351 DQGELLKDVGKEMQGHLDALGKKRGEKGAVKGKERGKKWGEVRELRKEYRQREGKVVKTV 410
Query: 1051 ---VKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
++V TC + L + FDVCI+DEA Q V P++ + K +L GD QLP
Sbjct: 411 VNGAQIVLATCHSAGSRQLNNMIFDVCIIDEATQAVEAVCWVPILKSKKLILAGDPQQLP 470
Query: 1108 PLVQSTE-----------------------ARENGMEISLFRRLSEEHPQAIS-ALQSQY 1143
P + S E +E +LF RL + + I LQ QY
Sbjct: 471 PTIMSKENAPPLKDLQEAIDQIKLGDSPSLKSPRTLETTLFERLEKLYGPGIKRVLQVQY 530
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSC----SPWLKEALNPCRPVIFV 1199
RM + I + +Y L + + AK + +L S S +K+ L P V+F
Sbjct: 531 RMNEHIAVFPSETLYESALIS---DASVAKRTLLELPSVKDKTSEDVKDDLEPT--VVFF 585
Query: 1200 NTDMLPAYEAKD-----------HQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
+T YE + + +N EA ++A+ ++L+ I +IGI+TPY
Sbjct: 586 DTADCEFYERTEGDGEATKSSIGEGSKSNENEAEIVARWARKLISLGIPPIEIGIVTPYQ 645
Query: 1249 SQANLIRHSL--SVSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINV 1306
+Q LI L + I ++D QG++++ I++S VRS NP + LG++ R+NV
Sbjct: 646 AQVTLISSLLHEEYPEMTIGSVDGLQGQEREAIILSLVRS--NP-SGEVGFLGEYRRLNV 702
Query: 1307 ALTRAKKKLIMVGSCRTLSK 1326
A+TRAK++L +VG +T+SK
Sbjct: 703 AMTRAKRQLCVVGDSKTVSK 722
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 206/448 (45%), Gaps = 75/448 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 407 LNGSQINAVKSVLQ-RPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 465
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 466 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKAE 519
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L KF ++DE+ Q+
Sbjct: 520 LGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAE 579
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 580 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 638
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT 1201
RM + E + + Y L G + V PW P P++F +
Sbjct: 639 RMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVD-----FPW------PVVDSPMMFWSN 687
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
A LN EA + KI K ++ DIGIITPY Q + I S+ +
Sbjct: 688 LGNEEISASGTSYLNR-TEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQAN 746
Query: 1262 S---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 747 GTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAK 803
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 804 YGLVILGNPKVLSKHPLWNCLLQHFKER 831
>gi|183230332|ref|XP_654283.2| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|169802981|gb|EAL48897.2| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 965
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 153/292 (52%), Gaps = 20/292 (6%)
Query: 1048 LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLP 1107
L ++ V T T P L +KF I+DEA Q+ P +L ++ K VL+GD QL
Sbjct: 623 LSGIECVCSTLTICTRPTLLKQKFFASIVDEAAQSLEPETLAGIINVRKAVLIGDIQQLQ 682
Query: 1108 PLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCG-- 1165
P STEARE G + S+F R + L++QYRM I E SN + Y +L G
Sbjct: 683 PTCLSTEAREAGFQKSMFERFMANTQIKRTMLKTQYRMHPAISEFSNKMFYSSKLENGVS 742
Query: 1166 -SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLI 1224
D N I + + N P++F+N D Y + NN E +I
Sbjct: 743 SKDRFDNRIIN---------FFPDYTN---PIMFINCDGTEQY-GSSGTSYNNAGEVQII 789
Query: 1225 AKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSSVEIHTIDKYQGRDKDCILVSFV 1284
++ ++L+ N+IE +IGII+PY +Q LI +S + +++ ID +QG +K+ I+ S V
Sbjct: 790 QEVVEKLLNNDIEENEIGIISPYQAQQELISQYVS-TKIKVANIDGFQGNEKEYIIFSCV 848
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
RS++ + D+ R+NVALTRAK+ LI++G+ TL + +LI++
Sbjct: 849 RSNQ---TLGVGFVNDYKRLNVALTRAKRGLIIIGNIPTLVTSKVWNMLIHQ 897
Score = 46.2 bits (108), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 944 SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLM---------RG-ASILL 993
+LND Q +AI L +D +L++G PGTGKT+ V + L+ RG +L+
Sbjct: 363 NLNDYQTKAIYNALN-EDISLVIGPPGTGKTTVAVSIAQYLIYNKYRFYNINRGEKKLLV 421
Query: 994 TSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSAMNINSVEEIKKRLDQVKV 1053
+ +N+AVD + +KL + I VR VV E ++C + NS+ +KK ++ +
Sbjct: 422 CASSNNAVDVICLKLIEKGIPTVR-----VVADEQFENCSDKIRKNSL--LKKAIEFTEK 474
Query: 1054 VAVTCLGIT 1062
+ + IT
Sbjct: 475 KGINEVAIT 483
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 206/448 (45%), Gaps = 75/448 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 426 LNGSQINAVKSVLQ-RPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 485 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKAE 538
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L KF ++DE+ Q+
Sbjct: 539 LGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAE 598
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 599 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 657
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT 1201
RM + E + + Y L G + V PW P P++F +
Sbjct: 658 RMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVD-----FPW------PVVDSPMMFWSN 706
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
A LN EA + KI K ++ DIGIITPY Q + I S+ +
Sbjct: 707 LGNEEISASGTSYLNR-TEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQAN 765
Query: 1262 S---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 766 GTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAK 822
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 823 YGLVILGNPKVLSKHPLWNCLLQHFKER 850
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 152 bits (385), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/448 (30%), Positives = 206/448 (45%), Gaps = 75/448 (16%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 426 LNGSQINAVKSVLQ-RPMSLIQGPPGTGKTVTSATIIYHLAKINGGQVLVCAPSNVAVDQ 484
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQKHCLSAMNINSVEEIK------- 1045
L ++ + VR+ R +V +H++++ +N +++E IK
Sbjct: 485 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVR------LNDSNIELIKLNQLKAE 538
Query: 1046 ---------KRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTL 1084
KRL Q+ V+ TC+G +P L KF ++DE+ Q+
Sbjct: 539 LGELSSQDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAE 598
Query: 1085 PVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQY 1143
P + PL+ K VLVGDH QL P++ + +A + G+ SLF RL I L QY
Sbjct: 599 PECMIPLVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQY 657
Query: 1144 RMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPC--RPVIFVNT 1201
RM + E + + Y L G + V PW P P++F +
Sbjct: 658 RMHPCLSEFPSNMFYEGSLQNGVSAFDRLRRDVD-----FPW------PVVDSPMMFWSN 706
Query: 1202 DMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVS 1261
A LN EA + KI K ++ DIGIITPY Q + I S+ +
Sbjct: 707 LGNEEISASGTSYLNR-TEATNVEKIVTRFFKAGVQPADIGIITPYEGQRSYIVSSMQAN 765
Query: 1262 S---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAK 1312
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK
Sbjct: 766 GTFKKEHYKEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAK 822
Query: 1313 KKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
L+++G+ + LSK PL L+ E+
Sbjct: 823 YGLVILGNPKVLSKHPLWNCLLQHFKER 850
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 161/581 (27%), Positives = 251/581 (43%), Gaps = 87/581 (14%)
Query: 815 IPTKDMDCTLRSGDYVILSTESDRLAVASGLITEISRFHVSVSFSKPLRLPGRNSSSDAD 874
+P D D L GD + L + D + G+ I V ++ + + R+S
Sbjct: 347 LPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHVIK---VPDNYGDEIAIELRSSVGAPV 403
Query: 875 SLLHE-----VWRIDKDEIMTS----FSVMRYNLVQLFLQSAQSSQLRRMIVDLEAP-RF 924
+ H VW+ + M S F+V ++ ++ +I+ + P RF
Sbjct: 404 EVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRF 463
Query: 925 DSGSVFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL 984
+ ++ LN Q A+ VL + +LI G PGTGKT T V L
Sbjct: 464 TAQAL-------------PDLNHSQVYAVKTVLQ-RPLSLIQGPPGTGKTVTSATIVYHL 509
Query: 985 LMR-GASILLTSYTNSAVDNLLIKLKSQSIDFVRI--GRHEVVHKEIQKHCL--SAMNIN 1039
+ +L+ + +N AVD L K+ + VR+ E + + L N++
Sbjct: 510 ARQDNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCPKSREAIDSPVSFLALHNQIRNMD 569
Query: 1040 SVEEIKKRLDQVK------------------------------VVAVTCLGITNPLLTDK 1069
S+ E++K L Q+K V+ TC+G +P L
Sbjct: 570 SMPELQK-LQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKM 628
Query: 1070 KFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+F ++DE+ Q T P + P++ +K +LVGDH QL P+V +A + G+ SLF RL
Sbjct: 629 QFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGLSQSLFERL 688
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKE 1188
+ I LQ QYRM + + + Y L G K K D W +
Sbjct: 689 VVLGIRPIR-LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVK-KGFDFQ----WPQ- 741
Query: 1189 ALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYN 1248
P +P+ F T + LN EA + KIT +L+K + IGIITPY
Sbjct: 742 ---PDKPMFFYVTQGQEEIASSGTSYLNR-TEAANVEKITTKLLKAGAKPDQIGIITPYE 797
Query: 1249 SQANLIRHSLSVSS---------VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLG 1299
Q + + + S VEI ++D +QGR+KD I++S VR++E+ L
Sbjct: 798 GQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQ---GIGFLN 854
Query: 1300 DWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINKVGEQ 1340
D R+NVALTRA+ +I+VG+ + LSK PL L+ EQ
Sbjct: 855 DPRRLNVALTRARYGVIIVGNPKALSKQPLWNHLLIFYKEQ 895
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 201/447 (44%), Gaps = 71/447 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V L M +L+ + +N AVD+
Sbjct: 453 LNHSQMSAVKAVLQ-KPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 1004 LLIKLKSQSIDFVRIGR---------------HEVV-----HKEIQKHCLSAMNINSVEE 1043
L K+ + VR+ H V H E+QK + + +
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 1044 IKKR-------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+R L+ V+ TC+G +P L KF ++DEA Q+ P + P
Sbjct: 572 SDERKYKTLVKACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLS--EEHPQAISALQSQYRMCQ 1147
L+ K VLVGDH QL P++ + +A G+ SLF RL HP LQ QYRM
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHP---IRLQVQYRMHP 688
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV----IFVNTDM 1203
+ E S+ L Y L G + V PW PV +F + ++
Sbjct: 689 CLSEFSSNLFYEGTLQNGVTAPERLRKNVD-----FPW---------PVADTPMFFHQNL 734
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--- 1260
+ + N EA + K+ + K+ + IG+ITPY Q + I + +
Sbjct: 735 GTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGS 794
Query: 1261 ------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
VE+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK
Sbjct: 795 LKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQ---GIGFLNDPRRLNVALTRAKYG 851
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQS 1341
++++G+ + LSK PL L++ E+
Sbjct: 852 VVILGNPKVLSKHPLWLYLLSHYKEKG 878
>gi|358057220|dbj|GAA96829.1| hypothetical protein E5Q_03501 [Mixia osmundae IAM 14324]
Length = 925
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 211/460 (45%), Gaps = 87/460 (18%)
Query: 929 VFSQDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMR- 987
V DP L LN Q RAI + L+++ ALI G PGTGK+ T++ A++ L +
Sbjct: 451 VLEGDPVLD-------LNRTQIRAIAQSLSSR-CALIQGPPGTGKSITIIEALRLLKVHF 502
Query: 988 --GASILLTSYTNSAVDNLLIKLKSQSIDFVRIGRHEVVHKEIQKHCL------------ 1033
IL+ + T+ AVD LL + + +R+G + V + +C+
Sbjct: 503 QVPQPILVCAPTHVAVDQLLARAVKAGLRPLRVGLEDKVSPSAEPYCMLAQVARHPFAEK 562
Query: 1034 ------------------SAMNINSVEEIKKRL----------------DQVKVVAVTCL 1059
+A +V+ KR+ V V+ TCL
Sbjct: 563 LEVMSDRIRGLDHQRIGPAATPDEAVDTKFKRVLSSRYFLESLIWADICSNVDVIFSTCL 622
Query: 1060 GITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASK-FVLVGDHYQLPPLVQSTEAREN 1118
G + + F + +DEA Q +L PLM S+ VL+GDH QLP + S +A +
Sbjct: 623 GASVSHVASIDFPIVFIDEAAQCNEASTLVPLMKGSQQLVLIGDHKQLPSIAMSPDATQE 682
Query: 1119 GMEISLFRRL--SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKV 1176
G ISLF RL S+ P + L +QYRM I + N Y +L + + + +
Sbjct: 683 GFNISLFERLMVSKRVPSVM--LDTQYRMHPDISKFPNMAFYRGQLRDAPSTLKSKQAAI 740
Query: 1177 SDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVK--N 1234
S SP K + + F+N D L E K+ ++ N EA I I ++L+ +
Sbjct: 741 R--SRFSPAGKSSA-----LTFINCDGL---EQKEGKSYINEGEAEEITLIVRDLLARNS 790
Query: 1235 EIEGKDIGIITPYNSQANLIRHSL----------SVSSVEIHTIDKYQGRDKDCILVSFV 1284
++ DIGIITPY Q + +R + V +E+ ++D +QGR+K+ I+ S V
Sbjct: 791 DLRCSDIGIITPYAGQVHRLRRMMLQSWRFPAGARVDQIEVSSVDGFQGREKEVIVFSAV 850
Query: 1285 RSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL 1324
RS+ ++ L D R+NVALTRAK L +VG+ TL
Sbjct: 851 RSN---KHSQLGFLSDRRRLNVALTRAKAALFVVGNALTL 887
>gi|3329511|gb|AAC39502.1| DNA helicase homolog [Schizosaccharomyces pombe]
Length = 191
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 9/188 (4%)
Query: 1069 KKFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVQSTEARENGMEISLFRRL 1128
+KFD CI+DEA Q LP+ LGPL A KFVLVGDHYQLPPLV+++ ++G+ +SLF+ L
Sbjct: 4 RKFDYCIIDEASQIPLPICLGPLQLAEKFVLVGDHYQLPPLVKNSRTSKDGLSLSLFKLL 63
Query: 1129 SEEHPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKI---------KVSDL 1179
SE+HP+A++ L+ QYRM + I LS+ LIYG L CGS I+ K+ + D
Sbjct: 64 SEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHLSDGLPDS 123
Query: 1180 SSCSPWLKEALNPCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGK 1239
SS W+ + +NP VIF NTD + E+K + L N EA LI + ++ ++
Sbjct: 124 SSSLHWVNKLINPSHSVIFFNTDDILGVESKTNNILENHTEAFLIEQAVSSFLERGVKQS 183
Query: 1240 DIGIITPY 1247
IGII+ Y
Sbjct: 184 SIGIISIY 191
>gi|149193893|ref|ZP_01870991.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
gi|149135846|gb|EDM24324.1| DNA helicase, UvrD/REP family protein [Caminibacter mediatlanticus
TB-2]
Length = 641
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 17/308 (5%)
Query: 1042 EEIKKR-LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGPLMFASKFVLV 1100
EEI K L+ +V T G + L ++KFDV +DEA Q+ P +L PL+ A + +
Sbjct: 344 EEIMKEILNSADIVFATNSGAGSEFLEERKFDVVFLDEAAQSMEPSTLIPLIKAKQSIFA 403
Query: 1101 GDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGIMELSNALIYGD 1160
GD QLPP + S + R +++S+F R + +P A L+ QYRM + I + Y
Sbjct: 404 GDDKQLPPTILSNDER---LKVSMFERFHKIYPIASHTLEVQYRMNEKINNFPSCEFYEC 460
Query: 1161 RLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA-KDHQTLNNPV 1219
++ ++I N I + DL E+ P++F +T E KD + NP
Sbjct: 461 KVKT-YEKIKN--ITLKDLGVNED---ESFGGYTPIVFFDTRGKFLEETKKDSPSKYNPK 514
Query: 1220 EACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLS---VSSVEIHTIDKYQGRDK 1276
EA + + ++L++N + + IG+ITPY I+ + + +EI ++D +QGR+K
Sbjct: 515 EAEFVLSLCKKLIENNAKQEFIGVITPYKDHEEYIKKLMENEKIEGIEIKSVDGFQGREK 574
Query: 1277 DCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTLSKVPLLKLLINK 1336
+ I+VS VR++E L D R+NVA+TR K+KLI+VG +TLS + LI+
Sbjct: 575 EIIIVSLVRANEKE---NIGFLDDIRRLNVAITRPKRKLIIVGDAKTLSTNQTYQHLIDY 631
Query: 1337 VGEQSGIL 1344
V ++ L
Sbjct: 632 VKKEGKYL 639
Score = 58.2 bits (139), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 887 EIMTSFSVMRYNL--VQLFLQSAQSSQLRRMIVDLEAPRFDSGSVFSQ-DPALSYIWSEK 943
E+ + + R L + LF+ ++ + + +LE FD + + +P L + +
Sbjct: 109 EVYSKEPIFRSKLYRLDLFVNDITFKRMLKALDNLENSEFDVDIILGKKNPKLEKVEVKS 168
Query: 944 -SLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASILLTSYTNSAVD 1002
LND Q +A+ + ++ + LI G PGTGKT+T+ +K + G IL+ + +N AVD
Sbjct: 169 DKLNDSQNKALSYSINSETF-LIHGPPGTGKTTTLAEVIKKHI--GKKILVCADSNVAVD 225
Query: 1003 NLLIKLKSQSIDFVRIGRHEVVHKEIQKHCLSA-----MNINSVEEIKKRLDQVK 1052
N+L KL ++ VRIG + + K+ L VE++ K++D +K
Sbjct: 226 NVLEKLSEYNV--VRIGHPAKIESNLMKYSLDVKIRRDKRYKEVEKLIKKIDDLK 278
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae 3.042]
Length = 1072
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 205/440 (46%), Gaps = 59/440 (13%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T + L + G +L+ + +N AVD
Sbjct: 419 LNGSQINAVKSVLQ-RPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQ 477
Query: 1004 LLIKLKSQSIDFVRI---GRHEV--------VHKEIQ--KHCLSAMNINSVE-------- 1042
L ++ + VR+ R +V +H++++ + + +N ++
Sbjct: 478 LCERIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELLKLNQLKAELGELSS 537
Query: 1043 EIKKRLDQVK------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+ +KRL Q+ V+ TC+G +P L KF ++DE+ Q+ P + P
Sbjct: 538 QDEKRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIP 597
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQGI 1149
L+ K VLVGDH QL P++ + +A + G+ SLF RL I L QYRM +
Sbjct: 598 LVLGCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIR-LNVQYRMHPCL 656
Query: 1150 MELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYEA 1209
E + + Y L G I + V PW P++F + A
Sbjct: 657 SEFPSNMFYEGSLQNGISSIERLRRDVD-----FPWPISD----NPMMFWSNLGNEEISA 707
Query: 1210 KDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------- 1262
LN EA + KI K ++ DIGIITPY Q + I S+ +
Sbjct: 708 SGTSYLNR-TEATNVEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGTFKKEHY 766
Query: 1263 --VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGS 1320
+E+ ++D +QGR+KD I++S VRS+++ L D R+NVALTRAK L ++G+
Sbjct: 767 KEIEVASVDAFQGREKDFIILSCVRSNDHQ---GIGFLSDPRRLNVALTRAKYGLAILGN 823
Query: 1321 CRTLSKVPLLKLLINKVGEQ 1340
+ LSK PL L+ E+
Sbjct: 824 PKVLSKHPLWNCLLQHFKER 843
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p [Cryptococcus
gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p [Cryptococcus
gattii WM276]
Length = 1097
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 201/447 (44%), Gaps = 71/447 (15%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALL-MRGASILLTSYTNSAVDN 1003
LN Q A+ VL K +LI G PGTGKT T V L M +L+ + +N AVD+
Sbjct: 453 LNHSQMSAVKAVLQ-KPLSLIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDH 511
Query: 1004 LLIKLKSQSIDFVRIGR---------------HEVV-----HKEIQKHCLSAMNINSVEE 1043
L K+ + VR+ H V H E+QK + + +
Sbjct: 512 LCEKIHQTGLKVVRLAAKSREALDSSVDFLSLHSQVANADTHHELQKLIQLRNDQGELSQ 571
Query: 1044 IKKR-------------LDQVKVVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLGP 1090
+R L+ V+ TC+G +P L KF ++DEA Q+ P + P
Sbjct: 572 SDERKYKALVRACEKDILNAADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIP 631
Query: 1091 LMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLS--EEHPQAISALQSQYRMCQ 1147
L+ K VLVGDH QL P++ + +A G+ SLF RL HP LQ QYRM
Sbjct: 632 LVMGCKQAVLVGDHQQLGPVIMNKKAARAGLSQSLFERLVILGNHP---IRLQVQYRMHP 688
Query: 1148 GIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPV----IFVNTDM 1203
+ E S+ L Y L G + V PW PV +F + ++
Sbjct: 689 CLSEFSSNLFYEGTLQNGVTAPERLRKNVD-----FPW---------PVADTPMFFHQNL 734
Query: 1204 LPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSV--- 1260
+ + N EA + K+ + K+ + IG+ITPY Q + I + +
Sbjct: 735 GTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQIGVITPYEGQRSYIASYMQLHGS 794
Query: 1261 ------SSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKK 1314
VE+ ++D +QGR+KD I++S VRS+E+ L D R+NVALTRAK
Sbjct: 795 LKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQ---GIGFLNDPRRMNVALTRAKYG 851
Query: 1315 LIMVGSCRTLSKVPLLKLLINKVGEQS 1341
++++G+ + LSK PL L++ E+
Sbjct: 852 VVILGNPKVLSKHPLWLYLLSHYKEKG 878
>gi|402870264|ref|XP_003899153.1| PREDICTED: uncharacterized protein LOC101006525 [Papio anubis]
Length = 2109
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 186/401 (46%), Gaps = 68/401 (16%)
Query: 987 RGASILLTSYTNSAVDNLLIKLKSQSID-FVRIGRHEVVHKEIQKHCLSAMNINSVEEIK 1045
R +L++S TN AVD +L+ L S + F+R+G + K I + L A + N E++K
Sbjct: 1687 RPWKLLISSSTNVAVDRVLLGLLSLGFENFIRVGSVRKIAKPILPYSLHAGSENESEQLK 1746
Query: 1046 KR-------------------------------LDQVKVVAVTCLGITNPLLTDKKFDVC 1074
+ L QV+VV VTC P + D KF V
Sbjct: 1747 ELHALMKEDLTPTERVYVRKSIEQHKLGTNRTLLKQVRVVGVTCAACPFPCMNDLKFPVV 1806
Query: 1075 IMDEAGQTTLPVSLGPL--MFASKFVLVGDHYQLPPLVQSTE-ARENGMEISLFRRLSEE 1131
++DE Q T P SL P+ K +LVGD QLPP +Q ++ A ENG+E +LF RL
Sbjct: 1807 VLDECSQITEPASLLPIARFECEKLILVGDPKQLPPTIQGSDAAHENGLEQTLFDRLCLM 1866
Query: 1132 HPQAISALQSQYRMCQGIMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALN 1191
+ I L++QYR I ++N L Y L G EI SP L+
Sbjct: 1867 GHKPI-LLRTQYRCHPAISAIANDLFYKGTLMNGVTEIER-----------SPLLEWLPT 1914
Query: 1192 PCRPVIFVNTDMLPAYEAKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQA 1251
C F N L E + + +N EA K+ Q L+ + I G IG+IT Y SQ
Sbjct: 1915 LC----FYNVKGLEQIERDN--SFHNVAEATFTLKLIQSLIASGIAGSMIGVITLYKSQM 1968
Query: 1252 NLIRHSLS--------VSSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHR 1303
+ H LS + +V++ T+D +QG +K+ I++S VR+ + + R
Sbjct: 1969 YKLCHLLSAVDFGHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ------VGFIDSEKR 2022
Query: 1304 INVALTRAKKKLIMVGSCRTLSKVPLLKLLINKV-GEQSGI 1343
+NVALTR K+ L++VG L K L +I G + G+
Sbjct: 2023 MNVALTRGKRHLLIVGHLACLRKNRLWGRVIQHCEGRKDGL 2063
>gi|363750954|ref|XP_003645694.1| hypothetical protein Ecym_3390 [Eremothecium cymbalariae DBVPG#7215]
gi|356889328|gb|AET38877.1| Hypothetical protein Ecym_3390 [Eremothecium cymbalariae DBVPG#7215]
Length = 663
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 146/490 (29%), Positives = 233/490 (47%), Gaps = 92/490 (18%)
Query: 932 QDPALSYIWSEKSLNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKALLMRGASI 991
Q ++ + ++LND Q++AI K + ++I G PGTGKT T+V + L+ +G I
Sbjct: 179 QKDSIEISFHNQNLNDSQKKAI-KFALQNEISIIHGPPGTGKTYTLVELIMQLVKQGQRI 237
Query: 992 LLTSYTNSAVDNLLIKLK----------------------SQSIDFVR-------IGRHE 1022
L+ +N +VD +L +L + SID + I R
Sbjct: 238 LICGPSNISVDTILERLAKVIPGNLLLRFGHPARLLPSTLAHSIDVISKSGDAGSIIRD- 296
Query: 1023 VVHKEIQKHCLSAMNINS----------VEEIKKRLDQ------------VKVVAVTCLG 1060
+++EI H L S +++++K L Q KVV T G
Sbjct: 297 -INQEINNHLLQIKKFKSYRDRKKAWQEIKDLRKELKQRERRVISELILAAKVVVCTLHG 355
Query: 1061 ITNPLLTD------KKFDVCIMDEAGQTTLPVSLGPLMF-----ASKFVLVGDHYQLPPL 1109
++ L K F+ I+DE Q+ P PL+ SK V+ GD+ QLPP
Sbjct: 356 SSSGNLCRVYDFEPKLFNTLIIDEVSQSLEPQCWIPLISHYKSNISKLVIAGDNKQLPPT 415
Query: 1110 VQSTEARENGMEI---SLFRRLSEEHPQAISALQS-QYRMCQGIMELSNALIYGDRLSCG 1165
++ TE E +I ++F +L + L + QYRM + IME + +Y D L
Sbjct: 416 IK-TEDDEKVKKILGTTIFDKLENHYGNDFKKLLNVQYRMNEQIMEFPSHQLYKDELIAA 474
Query: 1166 SDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNT---DMLPAYEAKD-----HQTLNN 1217
A AKI ++DL P ++ N P+++ +T D L E + + N
Sbjct: 475 E---AVAKITLADL----PGVEVDDNTSVPLLWFDTQGDDFLEKSEEVNGVLDIASSKYN 527
Query: 1218 PVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSL--SVSSVEIHTIDKYQGRD 1275
EA L+ +L+ + + + IGII+PYN+Q +L+R + S +EI ++D +QGR+
Sbjct: 528 ENEAYLLIHYVSQLLNSNVSQESIGIISPYNAQVSLLRKLVHEKYSLIEISSVDGFQGRE 587
Query: 1276 KDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVGSCRTL--SKVPLLKLL 1333
KDCI++S VRS++ L D R+NVA+TRAK++L ++G+ TL S+VP LK
Sbjct: 588 KDCIILSLVRSND---LFEVGFLRDERRLNVAMTRAKRQLCVIGNMETLERSQVPFLKEW 644
Query: 1334 INKVGEQSGI 1343
+ E S I
Sbjct: 645 VRWSEENSEI 654
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative [Schistosoma
mansoni]
Length = 1301
Score = 152 bits (383), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 138/441 (31%), Positives = 197/441 (44%), Gaps = 62/441 (14%)
Query: 945 LNDDQRRAIIKVLTAKDYALILGMPGTGKTSTMVHAVKAL-LMRGASILLTSYTNSAVDN 1003
LN Q A+ VL + +LI G PGTGKT T V L + +L+ + +N+AVD
Sbjct: 425 LNHSQVFAVKTVLQ-RPLSLIQGPPGTGKTVTSASIVYHLNQIHQKKVLVVAPSNTAVDQ 483
Query: 1004 LLIKLKSQSIDFVRIG--RHEVVHKEIQKHCL--SAMNINSVEEIKKRLDQVK------- 1052
L K+ + VR+ E + + + L A N+ E++K L Q+K
Sbjct: 484 LCEKIDRTGLKVVRLCARSREALASPVSRLMLHIQAQNVKGHTELRK-LQQLKDETGELS 542
Query: 1053 -----------------------VVAVTCLGITNPLLTDKKFDVCIMDEAGQTTLPVSLG 1089
VV TC+ + L F ++DE+ Q T P L
Sbjct: 543 QDDDKRYRVLKRELERELLMAADVVCCTCVTAGDARLERLSFHSVLIDESTQATEPECLI 602
Query: 1090 PLMFASK-FVLVGDHYQLPPLVQSTEARENGMEISLFRRLSEEHPQAISALQSQYRMCQG 1148
PLM + VLVGDH QL P++ +A G+ SLF R + I LQ QYRM
Sbjct: 603 PLMVGCRQVVLVGDHCQLGPVITCKKAASAGLTQSLFERFVLLGIRPIR-LQVQYRMHPA 661
Query: 1149 IMELSNALIYGDRLSCGSDEIANAKIKVSDLSSCSPWLKEALNPCRPVIFVNTDMLPAYE 1208
+ + + Y L G A + K D PW NP RP+ F T
Sbjct: 662 LSAFPSNVFYEGSLQNGV--TAEDRCKKIDF----PWP----NPDRPMFFYCTSGQEEIS 711
Query: 1209 AKDHQTLNNPVEACLIAKITQELVKNEIEGKDIGIITPYNSQANLIRHSLSVSS------ 1262
LN EA + KI +++K + IG+ITPY Q + H L S
Sbjct: 712 GNGVSYLNR-TEAATVEKIVTKMLKIGVHPNTIGVITPYEGQRAYLAHYLHYSGSLNAKL 770
Query: 1263 ---VEIHTIDKYQGRDKDCILVSFVRSSENPRNCTSSLLGDWHRINVALTRAKKKLIMVG 1319
+EI ++D +QGR+KD I++S VR++EN L D R+NVALTRA+ LI+VG
Sbjct: 771 YQEIEIASVDAFQGREKDYIILSCVRANENQ---GIGFLNDPRRLNVALTRARYGLIVVG 827
Query: 1320 SCRTLSKVPLLKLLINKVGEQ 1340
+ + L K PL L++ +Q
Sbjct: 828 NPKALCKQPLWNQLLHFYRDQ 848
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,482,131,460
Number of Sequences: 23463169
Number of extensions: 863247550
Number of successful extensions: 2321326
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2215
Number of HSP's successfully gapped in prelim test: 4114
Number of HSP's that attempted gapping in prelim test: 2294037
Number of HSP's gapped (non-prelim): 15419
length of query: 1345
length of database: 8,064,228,071
effective HSP length: 155
effective length of query: 1190
effective length of database: 8,722,404,172
effective search space: 10379660964680
effective search space used: 10379660964680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 84 (37.0 bits)