Query 000699
Match_columns 1345
No_of_seqs 393 out of 2002
Neff 4.5
Searched_HMMs 29240
Date Tue Mar 26 17:29:32 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000699.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_469-473//hhsearch_pdb/000699hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2owm_A Nckin3-434, related to 1.0 1 1 740.6 26.7 335 95-443 36-422 (443)
2 2y65_A Kinesin, kinesin heavy 1.0 1 1 734.4 27.7 350 95-466 9-363 (365)
3 3bfn_A Kinesin-like protein KI 1.0 1 1 725.6 28.0 347 95-464 19-374 (388)
4 3b6u_A Kinesin-like protein KI 1.0 1 1 724.6 27.0 341 95-459 19-372 (372)
5 3cob_A Kinesin heavy chain-lik 1.0 1 1 720.5 27.6 340 96-468 4-353 (369)
6 2zfi_A Kinesin-like protein KI 1.0 1 1 719.9 27.6 337 95-443 2-363 (366)
7 2vvg_A Kinesin-2; motor protei 1.0 1 1 715.7 30.3 330 95-447 2-348 (350)
8 1goj_A Kinesin, kinesin heavy 1.0 1 1 714.9 29.9 334 95-447 4-343 (355)
9 1x88_A Kinesin-like protein KI 1.0 1 1 711.3 24.3 336 95-443 6-359 (359)
10 1t5c_A CENP-E protein, centrom 1.0 1 1 711.3 30.4 332 95-447 2-341 (349)
No 1
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=740.59 Aligned_cols=335 Identities=42% Similarity=0.655 Sum_probs=290.9
Q ss_pred CCCCCEEEEEECCCCCCCC-CCCCEEEEECCC--EEE--------------------ECCEEEEECEECCC-------CC
Q ss_conf 9999289998399995435-898189990799--167--------------------86756880323199-------99
Q 000699 95 SDSGVKVIVRMRPLNKEEN-EGEMIVQKVADD--SLS--------------------INGHTFTFDSVADM-------EA 144 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~-~~~~~V~~~s~~--si~--------------------v~~k~FtFD~VFd~-------~a 144 (1345)
..++|+|+|||||++..|. .+..++...... .+. ...+.|+||+||++ .+
T Consensus 36 ~~~~vrV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~F~FD~vF~~~~~~~~~~a 115 (443)
T 2owm_A 36 PGANVRVVVRVRAFLPRELERNAECIVEMDPATERTSLLVPQETDFADARGARSRRVLEEKSFTFDKSFWSHNTEDEHYA 115 (443)
T ss_dssp CCEECEEEEEEECCCHHHHHTTCCCCEEECSSSCEEEECCCC---------------CCCEEEECSEEEEESCTTSTTCC
T ss_pred CCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCCCCCCC
T ss_conf 99894999993999968862699459997589862799558876543333321233667726852738278776776578
Q ss_pred CHHHHHHHHCHHHHHHHHCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 83688973233469987517763176327888882213128998742224587888971899999999999999863035
Q 000699 145 TQLDVFQLVGVPLVENCLSGFNSSVFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADK 224 (1345)
Q Consensus 145 sQeeVYe~vv~PLVdsvLeGyNaTIfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~ 224 (1345)
+|++||+.++.|+|+++|+|||+||||||||||||||||+|+ ..++|||||++++||..|...+ ....
T Consensus 116 sQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~----------~~~~GIipr~~~~lF~~i~~~~--~~~~ 183 (443)
T 2owm_A 116 TQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGT----------PDQPGLIPRTCEDLFQRIASAQ--DETP 183 (443)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCC----------TTSCCHHHHHHHHHHHHHHHTT--TTST
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECC----------CCCCCHHHHHHHHHHHHHHHHH--CCCC
T ss_conf 799998763246888863687427998678899998886468----------7777537999999999887652--1367
Q ss_pred CCEEEEEEEEEEEECCEEEECCCCC-----CCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 5206899978877524034157887-----78753000379986975838999639999999999876116544578888
Q 000699 225 QLNYQCRCSFLEIYNEQITDLLDPS-----QRNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINA 299 (1345)
Q Consensus 225 ~~~fsV~VSflEIYNEkI~DLL~p~-----~~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~ 299 (1345)
+..|.|+|||+|||||+|+|||++. ...|.|+|++.+|+||.||+++.|.+++|++.+|..|.++|++++|.||.
T Consensus 184 ~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~ 263 (443)
T 2owm_A 184 NISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMND 263 (443)
T ss_dssp TCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSC
T ss_pred CCEEEEEEEEEEEECCEEEECCCCCCCCCCCCCCCEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 73499999999998897568567634578653443037799999526877998289999999999997337863375877
Q ss_pred CCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC-
Q ss_conf 8988568999999953135789974045887999847998641222750244688754310067789999999986017-
Q 000699 300 ESSRSHSVFTCVVESRCKSKADGISRFKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQT- 378 (1345)
Q Consensus 300 ~SSRSHaIFTI~Ie~~~~~~~dg~~~~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~- 378 (1345)
.|||||+||+|.|++.......+....+.|+|+|||||||||++++++.|+|++|+.+||+||++||+||.+|++....
T Consensus 264 ~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~ 343 (443)
T 2owm_A 264 TSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSA 343 (443)
T ss_dssp BCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------------CCSSHHHHHHHHHHHHHCC-----
T ss_pred CCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCC
T ss_conf 66777199999999860356788740688779999798875356567766412110010578999999999986045555
Q ss_pred ----------------CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECC
Q ss_conf ----------------9998744789854321102368875314998408997765898999999999721524414433
Q 000699 379 ----------------GKQRHIPYRDSRLTFLLQESLGGNAKLAMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNE 442 (1345)
Q Consensus 379 ----------------~k~~hIPYRDSKLTrLLQDSLGGNSKT~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe 442 (1345)
.+..||||||||||+||||+|||||+|+|||||||+ +++||++||+||+|||.|+|+|++|+
T Consensus 344 ~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 344 SRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp --------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECC
T ss_conf 5444322234333445677745574547688888862799708999981643--07899999999999854456333513
Q ss_pred C
Q ss_conf 2
Q 000699 443 V 443 (1345)
Q Consensus 443 ~ 443 (1345)
.
T Consensus 422 ~ 422 (443)
T 2owm_A 422 V 422 (443)
T ss_dssp C
T ss_pred C
T ss_conf 5
No 2
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=734.40 Aligned_cols=350 Identities=42% Similarity=0.644 Sum_probs=310.0
Q ss_pred CCCCCEEEEEECCCCCCCC-CCCC-EEEEEC---CCEEEECCEEEEECEECCCCCCHHHHHHHHCHHHHHHHHCCCCCCE
Q ss_conf 9999289998399995435-8981-899907---9916786756880323199998368897323346998751776317
Q 000699 95 SDSGVKVIVRMRPLNKEEN-EGEM-IVQKVA---DDSLSINGHTFTFDSVADMEATQLDVFQLVGVPLVENCLSGFNSSV 169 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~-~~~~-~V~~~s---~~si~v~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvLeGyNaTI 169 (1345)
..++|+|+|||||++..|. .+.. ++.... ...+.+.++.|+||+||+++++|++||+.++.|+|+++|+|||+||
T Consensus 9 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~ti 88 (365)
T 2y65_A 9 AEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTI 88 (365)
T ss_dssp CEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCEEEEECCCCCCCEEEECCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99995999994969946731599259994799877679989989867469647899899999863037799867982489
Q ss_pred EECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCC
Q ss_conf 63278888822131289987422245878889718999999999999998630355206899978877524034157887
Q 000699 170 FAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQITDLLDPS 249 (1345)
Q Consensus 170 fAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI~DLL~p~ 249 (1345)
||||||||||||||+|... ++..+|||||++++||..+... .....|.|+|||+|||||+|+|||++.
T Consensus 89 fAYGqTGSGKTyTm~G~~~-------~~~~~Giipr~~~~lF~~i~~~-----~~~~~~~v~vS~~EIYnE~i~DLL~~~ 156 (365)
T 2y65_A 89 FAYGQTSSGKTHTMEGVIG-------DSVKQGIIPRIVNDIFNHIYAM-----EVNLEFHIKVSYYEIYMDKIRDLLDVS 156 (365)
T ss_dssp EEECSTTSSHHHHHTBSTT-------CTTTBCHHHHHHHHHHHHHHHC-----CSCEEEEEEEEEEEEETTEEEETTCTT
T ss_pred EEECCCCCCCCEEEECCCC-------CCCCCCHHHHHHHHHHHHHHHC-----CCCCEEEEEEEEEEEECCEEEECCCCC
T ss_conf 8345899999648866888-------7555773779999999999833-----689539999999999877212622587
Q ss_pred CCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEE
Q ss_conf 78753000379986975838999639999999999876116544578888898856899999995313578997404588
Q 000699 250 QRNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKADGISRFKSS 329 (1345)
Q Consensus 250 ~~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~dg~~~~k~S 329 (1345)
...+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|.+..... .....|
T Consensus 157 ~~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~----~~~~~s 232 (365)
T 2y65_A 157 KVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN----QKKLSG 232 (365)
T ss_dssp CCSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT----CCEEEE
T ss_pred CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC----CCEEEE
T ss_conf 6772378879998784278899658799999999999864665235688878876399999999970588----878689
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 79998479986412227502446887543100677899999999860179998744789854321102368875314998
Q 000699 330 RINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMIC 409 (1345)
Q Consensus 330 KL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGGNSKT~MIa 409 (1345)
+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++ ++..||||||||||+||||+||||++|+|||
T Consensus 233 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~----~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~ 308 (365)
T 2y65_A 233 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALAD----GNKTHIPYRDSKLTRILQESLGGNARTTIVI 308 (365)
T ss_dssp EEEEEECCCCCC----------------CCHHHHHHHHHHHHHHH----CCCSCCCGGGCHHHHHTGGGTTSSSEEEEEE
T ss_pred EEEEEECCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEE
T ss_conf 999997999882012189522478998888889999989999852----7888786635788898776138996379999
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 408997765898999999999721524414433211559999999999999999999
Q 000699 410 AISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNYLREVIRQLRDELHRMK 466 (1345)
Q Consensus 410 tISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~v~~Lk~~IrqLk~EL~~LK 466 (1345)
||||+..+++||++||+||+|||.|+|+|++|+++..+ .|.+..++..+++.+||
T Consensus 309 ~isP~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~--~~~~~~~~e~~~~~~L~ 363 (365)
T 2y65_A 309 CCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAE--EWKRRYEKEKEKNARLK 363 (365)
T ss_dssp EECCBGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSH--HHHHC------------
T ss_pred EECCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCHH--HHHHHHHHHHHHHHHHH
T ss_conf 84675278899999999999972156754117889999--99999999999999851
No 3
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=725.57 Aligned_cols=347 Identities=36% Similarity=0.566 Sum_probs=305.0
Q ss_pred CCCCCEEEEEECCCCCCCCCC--CCEEEEECCCEEEE-------CCEEEEECEECCCCCCHHHHHHHHCHHHHHHHHCCC
Q ss_conf 999928999839999543589--81899907991678-------675688032319999836889732334699875177
Q 000699 95 SDSGVKVIVRMRPLNKEENEG--EMIVQKVADDSLSI-------NGHTFTFDSVADMEATQLDVFQLVGVPLVENCLSGF 165 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~~~--~~~V~~~s~~si~v-------~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvLeGy 165 (1345)
..++|+|+|||||++..|... ..|+....+.++.+ ..+.|+||+||+++++|++||+.++.|+|+++|+||
T Consensus 19 ~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~i~~~~~~~~~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~ 98 (388)
T 3bfn_A 19 PPARVRVAVRLRPFVDGTAGASDPPCVRGMDSCSLEIANWRNHQETLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQ 98 (388)
T ss_dssp CCCCCEEEEEECCCC-----------------------------CEEEEECSEEECTTCCHHHHHHHHTGGGHHHHTTTC
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 99997999977989914534699863995599859995688887705987236956789775778998888888761696
Q ss_pred CCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEC
Q ss_conf 63176327888882213128998742224587888971899999999999999863035520689997887752403415
Q 000699 166 NSSVFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQITDL 245 (1345)
Q Consensus 166 NaTIfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI~DL 245 (1345)
|+||||||||||||||||+|+ ..++|||||++++||..+.... .......|.|+|||+|||||+|+||
T Consensus 99 N~tifAYGqTGSGKTyTM~G~----------~~~~Giipra~~~lF~~i~~~~--~~~~~~~~~V~vS~lEIYnE~i~DL 166 (388)
T 3bfn_A 99 NASVLAYGPTGAGKTHTMLGS----------PEQPGVIPRALMDLLQLTREEG--AEGRPWALSVTMSYLEIYQEKVLDL 166 (388)
T ss_dssp CEEEEEESCTTSSHHHHHTBC----------SSSBCHHHHHHHHHHHHHHHHT--STTCSEEEEEEEEEEEEETTEEEES
T ss_pred EEEEEEECCCCCCCCEEEECC----------CCCCCHHHHHHHHHHHHHHHHH--CCCCCCEEEEEEEEEEEECCEEEEH
T ss_conf 566761168889997686567----------5566416899999999998742--3377714899999999988864560
Q ss_pred CCCCCCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCE
Q ss_conf 78877875300037998697583899963999999999987611654457888889885689999999531357899740
Q 000699 246 LDPSQRNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKADGISR 325 (1345)
Q Consensus 246 L~p~~~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~dg~~~ 325 (1345)
|++....+.|++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|.+..... ...
T Consensus 167 L~~~~~~l~ired~~~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~---~~~ 243 (388)
T 3bfn_A 167 LDPASGDLVIREDCRGNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLA---PFR 243 (388)
T ss_dssp SSCSSCBCCCEECTTSCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESST---TCC
T ss_pred HCCCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC---CCC
T ss_conf 01678884599869999885360599958999999999997502652236477877777399999999822688---873
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 45887999847998641222750244688754310067789999999986017999874478985432110236887531
Q 000699 326 FKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKL 405 (1345)
Q Consensus 326 ~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGGNSKT 405 (1345)
...|+|+|||||||||.+++++.|.|++|+++||+||++||+||.+|++ +..||||||||||+||||+|||||+|
T Consensus 244 ~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~-----~~~hVPYRdSkLTrlLqdsLgGnskT 318 (388)
T 3bfn_A 244 QREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLFVLGKVVDALNQ-----GLPRVPYRDSKLTRLLQDSLGGSAHS 318 (388)
T ss_dssp EEEEEEEEEECCCTTC--------------CCCCHHHHHHHHHHHHHHT-----TCSCCCGGGSHHHHHTTTSSSTTCEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf 3688999998987766554567551147776750639999999999966-----99988675658899999860899628
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 49984089977658989999999997215244144332115599999999999999999
Q 000699 406 AMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNYLREVIRQLRDELHR 464 (1345)
Q Consensus 406 ~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~v~~Lk~~IrqLk~EL~~ 464 (1345)
+|||||||+..+++||++||+||+|||.|+|+|++|++..... + ..+..+++||..
T Consensus 319 ~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n~~~~~~~--l-~~~k~~~~~l~~ 374 (388)
T 3bfn_A 319 ILIANIAPERRFYLDTVSALNFAARSKEVINRPFTNESLQPHA--L-GPVKLSQKELLG 374 (388)
T ss_dssp EEEEEECCSGGGHHHHHHHHHHHCSEEEEC-----------------------------
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH--H-HHHHHHHHHHHC
T ss_conf 9999979850008999999999999851757673567899899--9-887889998617
No 4
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=724.60 Aligned_cols=341 Identities=46% Similarity=0.735 Sum_probs=302.6
Q ss_pred CCCCCEEEEEECCCCCCCC-CC-CCEEEEE-CCCEEEE---------CCEEEEECEECCCCCCHHHHHHHHCHHHHHHHH
Q ss_conf 9999289998399995435-89-8189990-7991678---------675688032319999836889732334699875
Q 000699 95 SDSGVKVIVRMRPLNKEEN-EG-EMIVQKV-ADDSLSI---------NGHTFTFDSVADMEATQLDVFQLVGVPLVENCL 162 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~-~~-~~~V~~~-s~~si~v---------~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvL 162 (1345)
...+|+|+|||||++..|. .+ ..++... ....+.+ ..+.|+||+||+++++|++||+.++.|+|+++|
T Consensus 19 ~~~~irV~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l 98 (372)
T 3b6u_A 19 SSESVRVVVRCRPMNGKEKAASYDKVVDVDVKLGQVSVKNPKGTAHEMPKTFTFDAVYDWNAKQFELYDETFRPLVDSVL 98 (372)
T ss_dssp --CBCEEEEEECCCCHHHHHTTCCBCEEEETTTTEEEECCTTCTTTCCCEEEECSEEECTTCCHHHHHHHTHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCEEEEEECCCCEEEEECCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99983999986989935530499638999589987999778877777843887686968867417898878777789986
Q ss_pred CCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEE
Q ss_conf 17763176327888882213128998742224587888971899999999999999863035520689997887752403
Q 000699 163 SGFNSSVFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQI 242 (1345)
Q Consensus 163 eGyNaTIfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI 242 (1345)
+|||+||||||||||||||||+|... .+..+|||||++++||..+.. .....|.|+|||+|||||+|
T Consensus 99 ~G~n~tifAYGqTGSGKTyTM~G~~~-------~~~~~Giipr~~~~lF~~i~~------~~~~~~~v~vS~~EIYnE~i 165 (372)
T 3b6u_A 99 QGFNGTIFAYGQTGTGKTYTMEGIRG-------DPEKRGVIPNSFDHIFTHISR------SQNQQYLVRASYLEIYQEEI 165 (372)
T ss_dssp TTCCEEEEEEESTTSSHHHHHTBCTT-------SGGGBCHHHHHHHHHHHHHHT------CSSCEEEEEEEEEEEETTEE
T ss_pred CCCEEEEEEECCCCCCCCEEEECCCC-------CCCCCCCHHHHHHHHHHHHHH------CCCCCEEEEEEEEEEECCEE
T ss_conf 79813588656899999875755899-------834488188999999998651------45773699998999967888
Q ss_pred EECCCCCC-CCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCC
Q ss_conf 41578877-87530003799869758389996399999999998761165445788888988568999999953135789
Q 000699 243 TDLLDPSQ-RNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKAD 321 (1345)
Q Consensus 243 ~DLL~p~~-~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~d 321 (1345)
+|||++.. ..+.+++++.+|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|++.... .+
T Consensus 166 ~DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~-~~ 244 (372)
T 3b6u_A 166 RDLLSKDQTKRLELKERPDTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVG-LD 244 (372)
T ss_dssp EETTSSCTTCCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----
T ss_pred EECCCCCCCCCCEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECC-CC
T ss_conf 99778977777368987999675289889992679999999999997667254557787776429999999996047-78
Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97404588799984799864122275024468875431006778999999998601799987447898543211023688
Q 000699 322 GISRFKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGG 401 (1345)
Q Consensus 322 g~~~~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGG 401 (1345)
+....+.|+|+|||||||||.+++++.|.|++|+.+||+||++||+||.+|++ ++..||||||||||+||||+|||
T Consensus 245 ~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~----~~~~hvPyRdSkLT~lLqdsLgG 320 (372)
T 3b6u_A 245 GENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSLSALGNVISALVD----GKSTHIPYRDSKLTRLLQDSLGG 320 (372)
T ss_dssp -CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHHHHHHHHHHHHHC----C---CCCGGGSHHHHHTTTTTTS
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 87626788999997988765544575154314675650649999999999863----89887866220889999986299
Q ss_pred CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHH
Q ss_conf 7531499840899776589899999999972152441443321155999999999999
Q 000699 402 NAKLAMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNYLREVIRQLR 459 (1345)
Q Consensus 402 NSKT~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~v~~Lk~~IrqLk 459 (1345)
||+|+|||||||+..+++||++||+||+|||.|+|+|++|+++.+. .|++|+
T Consensus 321 nskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~~~~n~~~~~~------~~~~~~ 372 (372)
T 3b6u_A 321 NAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKPRVNEDPKDA------LLREFQ 372 (372)
T ss_dssp SSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCC-----------------
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCHHHH------HHHHCC
T ss_conf 9548999996885247999999999999986455666255775799------998519
No 5
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=720.51 Aligned_cols=340 Identities=37% Similarity=0.607 Sum_probs=300.2
Q ss_pred CCCCEEEEEECCCCCCCCCC-C-CEEEEECCCEEEE-----CCEEEEECEECCCCCCHHHHHHHHCHHHHHHHHCCCCCC
Q ss_conf 99928999839999543589-8-1899907991678-----675688032319999836889732334699875177631
Q 000699 96 DSGVKVIVRMRPLNKEENEG-E-MIVQKVADDSLSI-----NGHTFTFDSVADMEATQLDVFQLVGVPLVENCLSGFNSS 168 (1345)
Q Consensus 96 ~~~VkVvVRVRPl~~~E~~~-~-~~V~~~s~~si~v-----~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvLeGyNaT 168 (1345)
.++|+|+|||||++..|... . .++.......+.. ..+.|+||+||+++++|++||+. +.|+|+++|+|||+|
T Consensus 4 ~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~n~t 82 (369)
T 3cob_A 4 KGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVC 82 (369)
T ss_dssp CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEE
T ss_pred CCCEEEEEECCCCCHHHCCCCCCEEEECCCCEEEEECCCCCCCEEEECCEEECCCCCCCEEHHH-HHHHHHHHHCCCCEE
T ss_conf 9984999987999834546798379976996799933789982688659898999973140221-313257664697159
Q ss_pred EEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCC
Q ss_conf 76327888882213128998742224587888971899999999999999863035520689997887752403415788
Q 000699 169 VFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQITDLLDP 248 (1345)
Q Consensus 169 IfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI~DLL~p 248 (1345)
|||||||||||||||+|+ ..++|||||++++||..+... .....|.|+|||+|||||+|+|||++
T Consensus 83 ifAYGqTGSGKTyTM~G~----------~~~~Giipr~~~~lF~~i~~~-----~~~~~~~v~vS~~EIYnE~i~DLL~~ 147 (369)
T 3cob_A 83 IFAYGQTGSGKTFTIYGA----------DSNPGLTPRAMSELFRIMKKD-----SNKFSFSLKAYMVELYQDTLVDLLLP 147 (369)
T ss_dssp EEEEECTTSSHHHHHTBC----------SSSBCHHHHHHHHHHHHHHHT-----TTTEEEEEEEEEEEECSSCEEESSCC
T ss_pred EEEECCCCCCCEEEECCC----------CCCCCHHHHHHHHHHHHHHHH-----CCCCEEEEEEEEEEEECCEEEECCCC
T ss_conf 998789999883751179----------988862589999999998741-----35752677899987707632345787
Q ss_pred CC---CCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCE
Q ss_conf 77---875300037998697583899963999999999987611654457888889885689999999531357899740
Q 000699 249 SQ---RNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKADGISR 325 (1345)
Q Consensus 249 ~~---~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~dg~~~ 325 (1345)
.. ..+.+++++.++++|.|++++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|++.... ...
T Consensus 148 ~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~----~~~ 223 (369)
T 3cob_A 148 KQAKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ----TQA 223 (369)
T ss_dssp SSSCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT----TCC
T ss_pred CCCCCCCEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCC----CCC
T ss_conf 5567764278997999888059879980899999999998752552303447787776338999999985278----772
Q ss_pred EEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 45887999847998641222750244688754310067789999999986017999874478985432110236887531
Q 000699 326 FKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKL 405 (1345)
Q Consensus 326 ~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGGNSKT 405 (1345)
...|+|+|||||||||.+++++.|.|++|+.+||+||++||+||.+|++ +..||||||||||+||||+|||||+|
T Consensus 224 ~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~-----~~~hvPyRdSkLT~lLqdsLgGnskt 298 (369)
T 3cob_A 224 IARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSS-----GNQHIPYRNHKLTMLMSDSLGGNAKT 298 (369)
T ss_dssp EEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHT-----TCSCCCGGGCHHHHHTTTTTTSSSEE
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCHHHHHHHHHCCCCCCE
T ss_conf 7888999996887875443476302347787877889999999999864-----89967874777788788762898527
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 499840899776589899999999972152441443321155999999999999999999957
Q 000699 406 AMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDDVNYLREVIRQLRDELHRMKAN 468 (1345)
Q Consensus 406 ~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~v~~Lk~~IrqLk~EL~~LK~~ 468 (1345)
+|||||||+..+++||++||+||+|||.|+|+|.+|++. .+|..|+.+|..+|..
T Consensus 299 ~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~~~--------~ei~~L~~~l~~~~~~ 353 (369)
T 3cob_A 299 LMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSS--------KEVARLKKLVSYWKEQ 353 (369)
T ss_dssp EEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCEEC--------HHHHHHHHHTTCC---
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHHHHHHHHHHHHH
T ss_conf 999994772002899999999999986545677415788--------9999999999999976
No 6
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=719.91 Aligned_cols=337 Identities=44% Similarity=0.699 Sum_probs=299.8
Q ss_pred CCCCCEEEEEECCCCCCCC-CCCCEEEEECCCEEEE--------CCEEEEECEECCCC--------CCHHHHHHHHCHHH
Q ss_conf 9999289998399995435-8981899907991678--------67568803231999--------98368897323346
Q 000699 95 SDSGVKVIVRMRPLNKEEN-EGEMIVQKVADDSLSI--------NGHTFTFDSVADME--------ATQLDVFQLVGVPL 157 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~-~~~~~V~~~s~~si~v--------~~k~FtFD~VFd~~--------asQeeVYe~vv~PL 157 (1345)
...+|+|+|||||++..|. .+..++....+..+.+ ..+.|+||+||++. ++|++||+.++.|+
T Consensus 2 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~~~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~pl 81 (366)
T 2zfi_A 2 AGASVKVAVRVRPFNSREMSRDSKCIIQMSGSTTTIVNPKQPKETPKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEM 81 (366)
T ss_dssp --CCEEEEEEECCCCHHHHHTTCCBCEEEETTEEEECCTTCTTSCCEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHH
T ss_pred CCCCCEEEEECCCCCHHHCCCCCCEEEEECCCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99980899988999835515799769997799679953677777762786246960576665445676999999999999
Q ss_pred HHHHHCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
Q ss_conf 99875177631763278888822131289987422245878889718999999999999998630355206899978877
Q 000699 158 VENCLSGFNSSVFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEI 237 (1345)
Q Consensus 158 VdsvLeGyNaTIfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEI 237 (1345)
|+++|+|||+||||||||||||||||+|+.. ...+|||||++++||..+... ......|.|+|||+||
T Consensus 82 v~~~l~G~N~tifAYGqTGSGKTyTm~G~~~--------~~~~Giipr~~~~lF~~i~~~----~~~~~~~~v~vS~~EI 149 (366)
T 2zfi_A 82 LQHAFEGYNVCIFAYGQTGAGKSYTMMGKQE--------KDQQGIIPQLCEDLFSRINDT----TNDNMSYSVEVSYMEI 149 (366)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBCSG--------GGCBCHHHHHHHHHHHHHHTC----CCTTEEEEEEEEEEEE
T ss_pred HHHHHCCCEEEEEEECCCCCCCCEEEECCCC--------CCCCCCHHHHHHHHHHHHHHC----CCCCEEEEEEEEEEEE
T ss_conf 9997469714899858999988458647876--------577866999999999987640----2677069999999996
Q ss_pred ECCEEEECCCCCC-CCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 5240341578877-875300037998697583899963999999999987611654457888889885689999999531
Q 000699 238 YNEQITDLLDPSQ-RNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRC 316 (1345)
Q Consensus 238 YNEkI~DLL~p~~-~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~ 316 (1345)
|||+|+|||++.. ..+.+++++.+|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|.+..
T Consensus 150 YnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~ 229 (366)
T 2zfi_A 150 YCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKR 229 (366)
T ss_dssp ETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEE
T ss_pred ECCEEEECCCCCCCCCCEEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEC
T ss_conf 08847891235567885688869998797698999977999999999997622461126577777764599999999960
Q ss_pred CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHC-------CCCCCCCCCCCC
Q ss_conf 3578997404588799984799864122275024468875431006778999999998601-------799987447898
Q 000699 317 KSKADGISRFKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQ-------TGKQRHIPYRDS 389 (1345)
Q Consensus 317 ~~~~dg~~~~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~-------~~k~~hIPYRDS 389 (1345)
.....+......|+|+|||||||||++++++.|.|++|+.+||+||++||+||.+|++... .++..|||||||
T Consensus 230 ~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdS 309 (366)
T 2zfi_A 230 HDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDS 309 (366)
T ss_dssp ECTTTTCEEEEEEEEEEEECCCGGGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGS
T ss_pred CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 46778754136768999968988645546787630044656767899999999998712345433334566774643332
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCC
Q ss_conf 543211023688753149984089977658989999999997215244144332
Q 000699 390 RLTFLLQESLGGNAKLAMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEV 443 (1345)
Q Consensus 390 KLTrLLQDSLGGNSKT~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~ 443 (1345)
|||+||||+|||||+|+|||||||+..+++||++||+||+|||+|+|+|+++..
T Consensus 310 kLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~~~~~~~~~ 363 (366)
T 2zfi_A 310 VLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAKQIRNTVSVNHH 363 (366)
T ss_dssp HHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHTC-----------
T ss_pred HHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 889999987289960999999688733499999999999998405588889997
No 7
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=715.74 Aligned_cols=330 Identities=46% Similarity=0.690 Sum_probs=296.1
Q ss_pred CCCCCEEEEEECCCCCCCCC-CC-CEEEEE-CCCEEEE--------------CCEEEEECEECCCCCCHHHHHHHHCHHH
Q ss_conf 99992899983999954358-98-189990-7991678--------------6756880323199998368897323346
Q 000699 95 SDSGVKVIVRMRPLNKEENE-GE-MIVQKV-ADDSLSI--------------NGHTFTFDSVADMEATQLDVFQLVGVPL 157 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~~-~~-~~V~~~-s~~si~v--------------~~k~FtFD~VFd~~asQeeVYe~vv~PL 157 (1345)
...+|+|+|||||++..|.. +. .++... ....+.+ ..+.|+||+||+++++|++||+.++.|+
T Consensus 2 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~pl 81 (350)
T 2vvg_A 2 SSDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSATQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPL 81 (350)
T ss_dssp --CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC--------------EEEECSEEECTTCCHHHHHHHTTHHH
T ss_pred CCCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHHH
T ss_conf 99986999990979913320499538998499988999604554433445778527667889799761068998789999
Q ss_pred HHHHHCCCCCCEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
Q ss_conf 99875177631763278888822131289987422245878889718999999999999998630355206899978877
Q 000699 158 VENCLSGFNSSVFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEI 237 (1345)
Q Consensus 158 VdsvLeGyNaTIfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEI 237 (1345)
|+++|+|||+||||||||||||||||+|+ ..++|||||++++||..+.. ......|.|+|||+||
T Consensus 82 v~~~l~G~n~tifAYGqTGSGKTyTm~G~----------~~~~Giipr~~~~lF~~i~~-----~~~~~~~~v~vS~~EI 146 (350)
T 2vvg_A 82 IDAVLEGFNSTIFAYGQTGAGKTWTMGGN----------KEEPGAIPNSFKHLFDAINS-----SSSNQNFLVIGSYLEL 146 (350)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBC----------SSSBCHHHHHHHHHHHHHHT-----CCTTEEEEEEEEEEEE
T ss_pred HHHHHCCCCEEEEEECCCCCCCCEEEECC----------CCCCCHHHHHHHHHHHHHHH-----HCCCCCEEEEEEEEEE
T ss_conf 99985788526886468999998785358----------76675588999999999986-----5368757999999999
Q ss_pred ECCEEEECCCCCCCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 52403415788778753000379986975838999639999999999876116544578888898856899999995313
Q 000699 238 YNEQITDLLDPSQRNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCK 317 (1345)
Q Consensus 238 YNEkI~DLL~p~~~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~ 317 (1345)
|||+|+|||++ ...+.+++++.+|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|++...
T Consensus 147 YnE~i~DLL~~-~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~ 225 (350)
T 2vvg_A 147 YNEEIRDLIKN-NTKLPLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEV 225 (350)
T ss_dssp ETTEEEETTTT-EEEECEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC
T ss_pred ECCEEEECCCC-CCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEC
T ss_conf 28788885567-76842567489988815877997499999999999998414600145788887652999999999504
Q ss_pred CCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 57899740458879998479986412227502446887543100677899999999860179998744789854321102
Q 000699 318 SKADGISRFKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQE 397 (1345)
Q Consensus 318 ~~~dg~~~~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQD 397 (1345)
. ++....+.|+|+|||||||||.+++++.|+|++|+.+||+||++||+||.+|++ +..||||||||||+||||
T Consensus 226 ~--~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~-----~~~hvPyRdSkLT~lLqd 298 (350)
T 2vvg_A 226 I--ENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVE-----GATHIPYRDSKLTRLLQD 298 (350)
T ss_dssp ------CEEEEEEEEEEECCCCCC---------------CTTHHHHHHHHHHHHHHH-----TCSSCCGGGCHHHHHTTT
T ss_pred C--CCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCHHHHHHHH
T ss_conf 6--787617889999996898875544565077889998875899999999999973-----899887645588899898
Q ss_pred CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHH
Q ss_conf 36887531499840899776589899999999972152441443321155
Q 000699 398 SLGGNAKLAMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDD 447 (1345)
Q Consensus 398 SLGGNSKT~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~ 447 (1345)
+|||||+|+|||||||+..+++||++||+||+|||.|+|+|++|+++.+.
T Consensus 299 sLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n~~~~~~ 348 (350)
T 2vvg_A 299 SLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRINEDPKDA 348 (350)
T ss_dssp TTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCCBSCTTC
T ss_pred HCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCHHC
T ss_conf 60899628999996884001899999999999985445666125782010
No 8
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=1.00 E-value=1 Score=714.85 Aligned_cols=334 Identities=46% Similarity=0.725 Sum_probs=301.9
Q ss_pred CCCCCEEEEEECCCCCCCCC-C-CCEEEEECCCEEEEC----CEEEEECEECCCCCCHHHHHHHHCHHHHHHHHCCCCCC
Q ss_conf 99992899983999954358-9-818999079916786----75688032319999836889732334699875177631
Q 000699 95 SDSGVKVIVRMRPLNKEENE-G-EMIVQKVADDSLSIN----GHTFTFDSVADMEATQLDVFQLVGVPLVENCLSGFNSS 168 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~~-~-~~~V~~~s~~si~v~----~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvLeGyNaT 168 (1345)
+.++|+|+|||||++..|.. + ..++....+..+.+. .+.|+||+||+++++|++||+.++.|+|+++|+|||+|
T Consensus 4 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~t 83 (355)
T 1goj_A 4 SANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGT 83 (355)
T ss_dssp SSCBCEEEEEECCCCHHHHTTTCCBCEEECSTTEEEECSTTCCEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCEEEECCCCCCCEEEECEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 99986999988999957850699639998699849972689752776195989987627999999999999985798222
Q ss_pred EEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCC
Q ss_conf 76327888882213128998742224587888971899999999999999863035520689997887752403415788
Q 000699 169 VFAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQITDLLDP 248 (1345)
Q Consensus 169 IfAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI~DLL~p 248 (1345)
|||||||||||||||+|+... ....+|||||++++||..+.. ......|.|+|||+|||||+|+|||++
T Consensus 84 ifAYGqTGSGKTyTm~G~~~~------~~~~~Giipr~~~~lF~~i~~-----~~~~~~~~v~vS~~EIYnE~i~DLL~~ 152 (355)
T 1goj_A 84 VFAYGQTGAGKSYTMMGTSID------DPDGRGVIPRIVEQIFTSILS-----SAANIEYTVRVSYMEIYMERIRDLLAP 152 (355)
T ss_dssp EEEECSTTSSHHHHHTBSCTT------STTTBCHHHHHHHHHHHHHHT-----SCTTEEEEEEEEEEEEETTEEEETTST
T ss_pred EEEECCCCCCCCEEEECCCCC------CCCCCCCHHHHHHHHHHHHHH-----CCCCCEEEEEEEEEEEECCEEEECCCC
T ss_conf 888899999860675157887------766687067999999999871-----456850899999999978977884457
Q ss_pred CCCCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEE
Q ss_conf 77875300037998697583899963999999999987611654457888889885689999999531357899740458
Q 000699 249 SQRNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKADGISRFKS 328 (1345)
Q Consensus 249 ~~~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~dg~~~~k~ 328 (1345)
....+.+++++.+|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|.+.... . .....
T Consensus 153 ~~~~l~i~e~~~~g~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--~--~~~~~ 228 (355)
T 1goj_A 153 QNDNLPVHEEKNRGVYVKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE--T--GSAKS 228 (355)
T ss_dssp TCCSCCEEEETTTEEEETTCCCEECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETT--T--TEEEE
T ss_pred CCCCCEEEECCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEECCC--C--CCEEE
T ss_conf 6678526885899996068779957999999999999975247233447898777609999999996068--8--95566
Q ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 87999847998641222750244688754310067789999999986017999874478985432110236887531499
Q 000699 329 SRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLAMI 408 (1345)
Q Consensus 329 SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGGNSKT~MI 408 (1345)
|+|+|||||||||.+++++.|+|++|+.+||+||++||+||.+|++ ++..||||||||||+||||+||||++|+||
T Consensus 229 skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~----~~~~hvPyRdSkLT~lLqdsLgGns~t~mI 304 (355)
T 1goj_A 229 GQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTD----GKSSHVPYRDSKLTRILQESLGGNSRTTLI 304 (355)
T ss_dssp EEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHHHHHHHHHHHHH----CSCSCCCGGGCHHHHHTGGGTTSSCEEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 5799998988774432466026678887651679999999999864----899988775579999999972899768999
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHH
Q ss_conf 840899776589899999999972152441443321155
Q 000699 409 CAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDD 447 (1345)
Q Consensus 409 atISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~ 447 (1345)
|||||+..+++||++||+||+|||.|+|+|++|+++...
T Consensus 305 ~~isP~~~~~~ETl~TL~fA~rak~I~n~~~vn~~~~~~ 343 (355)
T 1goj_A 305 INCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSPA 343 (355)
T ss_dssp EEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCSSSSCS
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCHH
T ss_conf 997963026999999999999972366775567879999
No 9
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=711.26 Aligned_cols=336 Identities=42% Similarity=0.657 Sum_probs=293.2
Q ss_pred CCCCCEEEEEECCCCCCCCC-C-CCEEEEEC-CCEEEE---------CCEEEEECEECCCCCCHHHHHHHHCHHHHHHHH
Q ss_conf 99992899983999954358-9-81899907-991678---------675688032319999836889732334699875
Q 000699 95 SDSGVKVIVRMRPLNKEENE-G-EMIVQKVA-DDSLSI---------NGHTFTFDSVADMEATQLDVFQLVGVPLVENCL 162 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~~-~-~~~V~~~s-~~si~v---------~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvL 162 (1345)
...+|+|+|||||++..|.. + ..++.... ...+.+ ..+.|+||+||+++++|++||+.++.|+|+++|
T Consensus 6 ~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l 85 (359)
T 1x88_A 6 KGKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVI 85 (359)
T ss_dssp ---CCEEEEEECCCCHHHHHTTCCCCEEEETTTTEEEEEEEEETTEEEEEEEECSEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEECCCCHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEECEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 99985999990899925630499649997599857998378766776744875407985267453789999888689873
Q ss_pred CCCCCCEEECCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCE
Q ss_conf 17763176327888882213128998742224-58788897189999999999999986303552068999788775240
Q 000699 163 SGFNSSVFAYGQTGSGKTYTMWGPANALLEEN-LSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQ 241 (1345)
Q Consensus 163 eGyNaTIfAYGQTGSGKTYTM~G~~~~~~~~~-~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEk 241 (1345)
+|||+||||||||||||||||+|+........ .....+|||||++++||..+. .....|.|+|||+|||||+
T Consensus 86 ~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~~lF~~i~-------~~~~~~~v~vS~~EIYnE~ 158 (359)
T 1x88_A 86 MGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLT-------DNGTEFSVKVSLLEIYNEE 158 (359)
T ss_dssp TTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHHHHHHHTS-------SSSEEEEEEEEEEEEETTE
T ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------CCCCEEEEEEEEEEEECCE
T ss_conf 798248998478999875688566776654444456668703899999998774-------1582599999999995761
Q ss_pred EEECCCCCC---CCCCEEECCC--CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEE
Q ss_conf 341578877---8753000379--98697583899963999999999987611654457888889885689999999531
Q 000699 242 ITDLLDPSQ---RNLQIREDVK--SGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRC 316 (1345)
Q Consensus 242 I~DLL~p~~---~~L~IrED~~--~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~ 316 (1345)
|+|||++.. ..+.+++++. +|++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|....
T Consensus 159 i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~ 238 (359)
T 1x88_A 159 LFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKE 238 (359)
T ss_dssp EEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEE
T ss_pred EEEHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEC
T ss_conf 00121156555666058865577898898287899849999999999987751461225477877776289999998743
Q ss_pred CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 35789974045887999847998641222750244688754310067789999999986017999874478985432110
Q 000699 317 KSKADGISRFKSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQ 396 (1345)
Q Consensus 317 ~~~~dg~~~~k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQ 396 (1345)
.. .++....+.|+|+|||||||||++++++.|+|++|+.+||+||++||+||.+|++ +..||||||||||+|||
T Consensus 239 ~~-~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~-----~~~hvPyRdSkLT~lLq 312 (359)
T 1x88_A 239 TT-IDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVE-----RTPHVPYRESKLTRILQ 312 (359)
T ss_dssp EC-TTSCEEEEEEEEEEEECCCCCC---------------CCCHHHHHHHHHHHHHHT-----TCSCCCGGGSHHHHHTG
T ss_pred CC-CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCCCCCCCCHHHHHHH
T ss_conf 55-7887137788999981899873543588632017776530789999999999864-----79977622566889999
Q ss_pred CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCC
Q ss_conf 23688753149984089977658989999999997215244144332
Q 000699 397 ESLGGNAKLAMICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEV 443 (1345)
Q Consensus 397 DSLGGNSKT~MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~ 443 (1345)
|+||||++|+|||||||+..+++||++||+||+|||+|+|+|++|+.
T Consensus 313 dsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~vn~~ 359 (359)
T 1x88_A 313 DSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQK 359 (359)
T ss_dssp GGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC----
T ss_pred HHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 97589972999999789745689999999999998656676614779
No 10
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=711.25 Aligned_cols=332 Identities=45% Similarity=0.688 Sum_probs=294.3
Q ss_pred CCCCCEEEEEECCCCCCCCC-CC--CEEEEECCCEEEE--CCEEEEECEECCCCCCHHHHHHHHCHHHHHHHHCCCCCCE
Q ss_conf 99992899983999954358-98--1899907991678--6756880323199998368897323346998751776317
Q 000699 95 SDSGVKVIVRMRPLNKEENE-GE--MIVQKVADDSLSI--NGHTFTFDSVADMEATQLDVFQLVGVPLVENCLSGFNSSV 169 (1345)
Q Consensus 95 ~~~~VkVvVRVRPl~~~E~~-~~--~~V~~~s~~si~v--~~k~FtFD~VFd~~asQeeVYe~vv~PLVdsvLeGyNaTI 169 (1345)
.+++|+|+|||||++..|.. +. .+.....+..+.. +.+.|+||+||+++++|++||+.++.|+|+++|+|||+||
T Consensus 2 e~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~i~~~~~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~ti 81 (349)
T 1t5c_A 2 EEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDGSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTI 81 (349)
T ss_dssp -CCCEEEEEEECCCSCSSCTTTTCCCCCEEEETTEEEETTSSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEE
T ss_pred CCCCEEEEEECCCCCHHHHCCCCCCEEEEECCCCEEEECCCCEEEECCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 98997999988988915642599747999589976997799828878979899999899999998999999874886405
Q ss_pred EECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCC
Q ss_conf 63278888822131289987422245878889718999999999999998630355206899978877524034157887
Q 000699 170 FAYGQTGSGKTYTMWGPANALLEENLSSDQQGLTPRVFERLFSRINEEQIKHADKQLNYQCRCSFLEIYNEQITDLLDPS 249 (1345)
Q Consensus 170 fAYGQTGSGKTYTM~G~~~~~~~~~~s~~~~GIIPRaledLFs~I~~~q~k~~~~~~~fsV~VSflEIYNEkI~DLL~p~ 249 (1345)
||||||||||||||+|+ .+.+|||||++++||..+.. ..+..|.|+|||+|||||+|+|||++.
T Consensus 82 fAYGqTGSGKTyTM~G~----------~~~~Giipr~~~~lF~~i~~------~~~~~~~v~vS~~EIYnE~i~DLL~~~ 145 (349)
T 1t5c_A 82 FAYGQTASGKTYTMMGS----------EDHLGVIPRAIHDIFQKIKK------FPDREFLLRVSYMEIYNETITDLLCGT 145 (349)
T ss_dssp EEEESTTSSHHHHHTBC----------SSSBCHHHHHHHHHHHHGGG------CTTEEEEEEEEEEEEETTEEEESSSSS
T ss_pred EEECCCCCCCCEEEECC----------CCCCCHHHHHHHHHHHHHHH------CCCCCEEEEEEEEEEECCEEEECCCCC
T ss_conf 62158999987687468----------88874588999999999974------768867999889998487778866787
Q ss_pred C--CCCCEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC-CCCCEE
Q ss_conf 7--8753000379986975838999639999999999876116544578888898856899999995313578-997404
Q 000699 250 Q--RNLQIREDVKSGVYVENLTEEYVCTMKDVTQLLMKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSKA-DGISRF 326 (1345)
Q Consensus 250 ~--~~L~IrED~~~gv~V~GLtev~V~S~eEvl~LL~~G~knR~tasT~mN~~SSRSHaIFTI~Ie~~~~~~~-dg~~~~ 326 (1345)
. .++.|++|+.++++|.||+++.|.+++|++.+|..|.++|++++|.||..|||||+||+|.|++...... ......
T Consensus 146 ~~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~ 225 (349)
T 1t5c_A 146 QKMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSV 225 (349)
T ss_dssp CTTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CE
T ss_pred CCCCCCEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCE
T ss_conf 77877469988999987448879986899999999997523345233657788887639999999985168876767637
Q ss_pred EEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 58879998479986412227502446887543100677899999999860179998744789854321102368875314
Q 000699 327 KSSRINLVDLAGSERQKLTGAAGERLKEAGNINKSLSQLGNLINILAEVSQTGKQRHIPYRDSRLTFLLQESLGGNAKLA 406 (1345)
Q Consensus 327 k~SKL~LVDLAGSER~~kTga~G~RlkEa~~INkSLsaLG~VI~ALae~s~~~k~~hIPYRDSKLTrLLQDSLGGNSKT~ 406 (1345)
+.|+|+|||||||||.+++++.|.|++|+.+||+||++||+||.+|++. .+..||||||||||+||||+||||++|+
T Consensus 226 ~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~---~~~~hvPyRdSkLT~lLqdsLgGnskt~ 302 (349)
T 1t5c_A 226 KVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDG---QVGGFINYRDSKLTRILQNSLGGNAKTR 302 (349)
T ss_dssp EEEEEEEEECCCGGGTC-------CCCSSSCCCHHHHHHHHHHHHHHHT---CCTTSSCGGGSHHHHHTGGGTTSSSEEE
T ss_pred EEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCHHHHHHHHHCCCCCEEE
T ss_conf 8999999979987532214786411133547768999999999998556---8777776556377899998618996299
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCHHH
Q ss_conf 99840899776589899999999972152441443321155
Q 000699 407 MICAISPAQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDD 447 (1345)
Q Consensus 407 MIatISPs~~~~eETLSTLrFAsRAK~IKNkpvVNe~~~d~ 447 (1345)
|||||||+ +++||++||+||+|||.|+|+|++|+++...
T Consensus 303 mI~~isP~--~~~ETlsTL~fA~rak~I~n~~~vn~~~~~~ 341 (349)
T 1t5c_A 303 IICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDE 341 (349)
T ss_dssp EEEEECTT--CSHHHHHHHHHHHHHTTCCCCCCCCEEC---
T ss_pred EEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 99994777--7899999999999974536676536678888
Done!