BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000700
(1344 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93YQ1|RTOR1_ARATH Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana
GN=RAPTOR1 PE=1 SV=1
Length = 1344
Score = 2085 bits (5401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1067/1355 (78%), Positives = 1177/1355 (86%), Gaps = 29/1355 (2%)
Query: 1 MALGDLMASRFSQSAV--VSNH-LNDDCGSAHGDVDLRR-DSDTASSSYTNNASVTTITT 56
MALGDLM SRFSQS+V VSNH ++DC S+H D D RR DS+ SSS N TT
Sbjct: 1 MALGDLMVSRFSQSSVSLVSNHRYDEDCVSSHDDGDSRRKDSEAKSSSSYGNG--TTEGA 58
Query: 57 TTTTSLAYLPQTVVLCELRHEAFEASTPSGPSDSGLVSKWRPKDRMKTGCVALVLCLNIS 116
T TS+AYLPQT+VLCELRH+A EAS P G S+ LV KWR K+RMKTGCVALVLCLNI+
Sbjct: 59 ATATSMAYLPQTIVLCELRHDASEASAPLGTSEIVLVPKWRLKERMKTGCVALVLCLNIT 118
Query: 117 VDPPDVIKISPCARMECWIDPFSMAPQKALETIGKNLSQQYERWQPRARYKVQLDPTVDE 176
VDPPDVIKISPCAR+E WIDPFSMAP KALETIGKNLS QYERWQPRARYKVQLDPTVDE
Sbjct: 119 VDPPDVIKISPCARIEAWIDPFSMAPPKALETIGKNLSTQYERWQPRARYKVQLDPTVDE 178
Query: 177 VKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEIWLFNK----YIPLPISDLDSWLKTP 232
V+KLC TCR+YAK ERVLFHYNGHGVPKPTANGEIW+FNK YIPLPIS+LDSWLKTP
Sbjct: 179 VRKLCLTCRKYAKTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPISELDSWLKTP 238
Query: 233 SIYVFDCSAAGMIVNAFIELHDWGASNYSGSTRDCILLAACEAHETLPQSEEFPADVFTS 292
SIYVFDCSAA MI+NAF ELHDWG+S SGS+RDCILLAAC+ HETLPQS EFPADVFTS
Sbjct: 239 SIYVFDCSAARMILNAFAELHDWGSSGSSGSSRDCILLAACDVHETLPQSVEFPADVFTS 298
Query: 293 CLTTPITMALRWFCKRSLLHESLDYSLIDKIPGRQTDRRTLLGELNWIFTAVTDTIAWNV 352
CLTTPI MAL+WFC+RSLL E +D SLID+IPGRQ DR+TLLGELNWIFTAVTDTIAWNV
Sbjct: 299 CLTTPIKMALKWFCRRSLLKEIIDESLIDRIPGRQNDRKTLLGELNWIFTAVTDTIAWNV 358
Query: 353 LPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISHPMLPPTHQHHMWDAWDMAAE 412
LPH+LFQRLFRQDLLVASLFRNFLLAERIMRSANC+PISHPMLPPTHQHHMWDAWDMAAE
Sbjct: 359 LPHELFQRLFRQDLLVASLFRNFLLAERIMRSANCNPISHPMLPPTHQHHMWDAWDMAAE 418
Query: 413 ICLSQLPSLVADPNAEYQPSPFFSEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHR 472
ICLSQLP LV DP+ E+QPSPFF+EQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHR
Sbjct: 419 ICLSQLPQLVLDPSTEFQPSPFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHR 478
Query: 473 FRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQ 532
FRALVLLGRFLDMG WAVDLALSVGIFPYVLKLLQTTT ELRQILVFIWTKILALDKSCQ
Sbjct: 479 FRALVLLGRFLDMGSWAVDLALSVGIFPYVLKLLQTTTNELRQILVFIWTKILALDKSCQ 538
Query: 533 VDLVKDGGHAYFIRFLDSMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHL 592
+DLVKDGGH YFIRFLDS A+PEQRAMAAFVLAVIVDGHRRGQEAC+EA LI VCL HL
Sbjct: 539 IDLVKDGGHTYFIRFLDSSGAFPEQRAMAAFVLAVIVDGHRRGQEACLEANLIGVCLGHL 598
Query: 593 QGSMPNDAQTEPLFLQWLCLCLGKLWEDFTEAQTIGRRADAPAIYVPLLSEPQPEVRASA 652
+ S P+D Q EPLFLQWLCLCLGKLWEDF EAQ +GR A+A PLLSEPQPEVRA+A
Sbjct: 599 EASRPSDPQPEPLFLQWLCLCLGKLWEDFMEAQIMGREANAFEKLAPLLSEPQPEVRAAA 658
Query: 653 VFSLGTLLDIGFDSCRDGVEGDEECDDDEKIRAEISIIRSLLTVVSDGSPLVRAEVAVAL 712
VF+LGTLLDIGFDS + VE +E DDDEKIRAE +II+SLL VVSDGSPLVRAEVAVAL
Sbjct: 659 VFALGTLLDIGFDSNKSVVE--DEFDDDEKIRAEDAIIKSLLDVVSDGSPLVRAEVAVAL 716
Query: 713 ARFAFGHKQHLKSIAAAYSKPQSNSLLGSLPSLAHIKTTGSGSIVSSQIGPLTRVGNEA- 771
ARFAFGHKQHLK AA+Y KPQS+SLL SLPS+A GS +IVS + PLTR ++
Sbjct: 717 ARFAFGHKQHLKLAAASYWKPQSSSLLTSLPSIAKFHDPGSATIVSLHMSPLTRASTDSQ 776
Query: 772 -VVRDGRVSTSSPLANAGLMHGSPLSDDSSQHSDSGILNDGVSNGVVNHMRPKPLDSAIY 830
V R+ R+S+S L ++GLM GSPLSDDSS HSDSG+++D VSNG V+ +P+ LD+A+Y
Sbjct: 777 PVARESRISSSP-LGSSGLMQGSPLSDDSSLHSDSGMMHDSVSNGAVH--QPRLLDNAVY 833
Query: 831 SQCVLAMCTLAKDPSPRIATLGRRVLSIIGIEQVVTKPVMSMGNTSRPGDPTTAAPTPSL 890
SQCV AM LAKDPSPRIA+LGRRVLSIIGIEQVV KP G RPG+ T + TP L
Sbjct: 834 SQCVRAMFALAKDPSPRIASLGRRVLSIIGIEQVVAKPSKPTG---RPGEAATTSHTP-L 889
Query: 891 AGLVRSSSWFDMNGGHLPLKFRTPPVSPPRQSFLPGMRRVCSLEFRPHLINSPDSGLADP 950
AGL RSSSWFDM+ G+LPL FRTPPVSPPR ++L G+RRVCSLEFRPHL+ SPDSGLADP
Sbjct: 890 AGLARSSSWFDMHAGNLPLSFRTPPVSPPRTNYLSGLRRVCSLEFRPHLLGSPDSGLADP 949
Query: 951 LLGSGDPSAVSERSLLPPSTIYNWSCGHFSKPLLTAADDTEEILARREEREKFALEHIAK 1010
LLG+ SERSLLP STIY WSCGHFSKPLL AD ++EI A+REE+EKFALEHIAK
Sbjct: 950 LLGASG----SERSLLPLSTIYGWSCGHFSKPLLGGADASQEIAAKREEKEKFALEHIAK 1005
Query: 1011 CQRSSVSKL-NNPIACWDTRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSF 1069
CQ SS+SKL NNPIA WDTRFE GTKTALL PFSPIVVAADENERI++WNYEE TLLN F
Sbjct: 1006 CQHSSISKLNNNPIANWDTRFETGTKTALLHPFSPIVVAADENERIRVWNYEEATLLNGF 1065
Query: 1070 DNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPG 1129
DNHDFPDKGISKLCL+NELD SLLLVASC+G++RIWK+Y K KQKLVT FSSIQGHKPG
Sbjct: 1066 DNHDFPDKGISKLCLINELDDSLLLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPG 1125
Query: 1130 VRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGG 1189
R N VVDWQQQSGYLYASGE S++ LWDLEKE Q+V +PS S+C ++AL+ASQVHGG
Sbjct: 1126 ARDLNAVVDWQQQSGYLYASGETSTVTLWDLEKE-QLVRSVPSESECGVTALSASQVHGG 1184
Query: 1190 QLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQ 1249
QLAAGF DGS+RLYDVR+P+ LVC+TRPH Q+VERVVG+SFQPGLDPAK+VSASQAGDIQ
Sbjct: 1185 QLAAGFADGSLRLYDVRSPEPLVCATRPH-QKVERVVGLSFQPGLDPAKVVSASQAGDIQ 1243
Query: 1250 FLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHP 1309
FLD+R +D YLTIDAHRGSL+ALAVHRHAPIIASGSAKQLIKVFSL+GEQLG IRY +P
Sbjct: 1244 FLDLRTTRDTYLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLQGEQLGIIRY-YP 1302
Query: 1310 SFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344
SFMAQKIGSV+CLTFHPYQVLLAAG+AD+ VSI++
Sbjct: 1303 SFMAQKIGSVSCLTFHPYQVLLAAGAADSFVSIYT 1337
>sp|Q9LZW9|RTOR2_ARATH Regulatory-associated protein of TOR 2 OS=Arabidopsis thaliana
GN=RAPTOR2 PE=2 SV=2
Length = 1336
Score = 1940 bits (5025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 994/1373 (72%), Positives = 1126/1373 (82%), Gaps = 74/1373 (5%)
Query: 1 MALGDLMASRFSQSAV--VSNHLNDD----CGSAHGD--VDLRRDSDTASSSYTNNASVT 52
MALGDLM SR SQS+V V+NHL DD SAH D V + ASSSY N
Sbjct: 1 MALGDLMVSRLSQSSVTVVTNHLYDDDDNCASSAHDDSRVSIIASPRVASSSYEN----- 55
Query: 53 TITTTTTTSLAYLPQTVVLCELRHEAFEASTPSGPSDSGLVSKWRPKDRMKTGCVALVLC 112
+ TS+AYLPQT+VLC+LRH+ +AS P +WR K+RMKTGCVALV+C
Sbjct: 56 ---LSAATSMAYLPQTLVLCDLRHD--DASDIVQPP------RWRLKERMKTGCVALVMC 104
Query: 113 LNISVDPPDVIKISPCARMECWIDPFSM-APQKALETIGKNLSQQYERWQPRARYKVQLD 171
L+I+VDPPDVIKISPCAR+ECWIDPFSM P++ALE IG+NLS QYERW RARYKV+LD
Sbjct: 105 LHITVDPPDVIKISPCARLECWIDPFSMFPPRRALEAIGQNLSIQYERWLARARYKVELD 164
Query: 172 PTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEIWLFNK----YIPLPISDLDS 227
PT D+V+KLC +CR+YAK ERVLFHYNGHGVPKPT NGEIW++NK YIPLP+S+LDS
Sbjct: 165 PTKDDVRKLCLSCRKYAKTERVLFHYNGHGVPKPTPNGEIWVYNKNFTQYIPLPVSELDS 224
Query: 228 WLKTPSIYVFDCSAAGMIVNAFIELHDWGASNYSGSTRDCILLAACEAHETLPQSEEFPA 287
WLKTP+IYVFDCSAA +I+NAF E SG +DCILLAAC+ HETLPQS EFPA
Sbjct: 225 WLKTPTIYVFDCSAARVILNAFAE------GESSGPPKDCILLAACDVHETLPQSVEFPA 278
Query: 288 DVFTSCLTTPITMALRWFCKRSLLHESLDYSLIDKIPGRQTDRRTLLGELNWIFTAVTDT 347
DVFTSCLTTPI +AL+WFC+RSLL E +D SLID+IPGRQ DR+TLLGELNWIFTAVTDT
Sbjct: 279 DVFTSCLTTPINIALKWFCRRSLLKEFIDESLIDRIPGRQNDRKTLLGELNWIFTAVTDT 338
Query: 348 IAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISHPMLPPTHQHHMWDAW 407
IAWNVLP +LFQRLFRQDLLVASLFRNFLLAERIMRS NC+PISHPMLPPTHQHHMWDAW
Sbjct: 339 IAWNVLPRELFQRLFRQDLLVASLFRNFLLAERIMRSGNCTPISHPMLPPTHQHHMWDAW 398
Query: 408 DMAAEICLSQLPSLVADPNAEYQPSPFFSEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLL 467
DMAAEICLSQLP DPN E+QPS FF+EQLTAFEVWLDHGSEHKKPPEQLPIVLQVLL
Sbjct: 399 DMAAEICLSQLPQFFLDPNTEFQPSSFFTEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLL 458
Query: 468 SQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILAL 527
SQCHR+RALVLLGRFLDMGPWAVDLALSVGI+P V+KLLQTTT ELRQILVFIWTKILAL
Sbjct: 459 SQCHRYRALVLLGRFLDMGPWAVDLALSVGIYPCVVKLLQTTTIELRQILVFIWTKILAL 518
Query: 528 DKSCQVDLVKDGGHAYFIRFLDSMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHV 587
DKSCQVDLVKD GH YFIRFLDS +A+PEQRAMAAF+LAVIVDG++RGQE+C+EA LI V
Sbjct: 519 DKSCQVDLVKDRGHIYFIRFLDSSDAFPEQRAMAAFILAVIVDGYKRGQESCLEANLIAV 578
Query: 588 CLKHLQGSMPNDAQTEPLFLQWLCLCLGKLWEDFTEAQTIGRRADAP----AIYVPLLSE 643
CL HL+ + D EPLFLQWLCLCLGKLWED+ EAQ +GR A+A A + LL
Sbjct: 579 CLGHLEATQLCDPPPEPLFLQWLCLCLGKLWEDYLEAQIMGREANASENLIAGHTNLL-- 636
Query: 644 PQPEVRASAVFSLGTLLDIGFDSCRDGVEGDEECDDDEKIRAEISIIRSLLTVVSDGSPL 703
+VRA+AVF+LGTLLD+GFDS + GV DEE DDDE I +I II+SLL VVSDGSPL
Sbjct: 637 ---QVRAAAVFALGTLLDVGFDSGK-GV-CDEEFDDDENIVEDI-IIKSLLDVVSDGSPL 690
Query: 704 VRAEVAVALARFAFGHKQHLKSIAAAYSKPQSNSLLGSLPSLAHIKTTGSGSIVSSQIGP 763
VR EVAVALARFAFGHKQHLKS+A +Y KPQ NSL SLPS+A +G+ + SS +G
Sbjct: 691 VRTEVAVALARFAFGHKQHLKSVADSYWKPQ-NSLRTSLPSMAKFHDSGTSIVASSDMGS 749
Query: 764 LTRVG--NEAVVRDGRVSTSSPLANAGLMHGSPLSDDSSQHSDSGILNDGVSNGVVNHMR 821
LTR ++ V R+GR+S+S +GLM GSPL+DDSS HSD GI++DGVSNGVV+ +
Sbjct: 750 LTRASPDSQPVAREGRISSSLQEPFSGLMQGSPLADDSSLHSDVGIIHDGVSNGVVH--Q 807
Query: 822 PKPLDSAIYSQCVLAMCTLAKDPSPRIATLGRRVLSIIGIEQVVTKPVMSMGNTSRPGDP 881
P+PLD+AIYSQ VLAM TLAKDPSPRIA+LGRRVLS+IGIEQ+V KP S G RPG+
Sbjct: 808 PRPLDNAIYSQSVLAMFTLAKDPSPRIASLGRRVLSVIGIEQIVAKPSKSNG---RPGEA 864
Query: 882 TTAAPTPSLAGLVRSSSWFDMNGGHLPLKFRTPPVSPPRQSFLPGMRRVCSLEFRPHLIN 941
+A+ TP LAGLVRSSSWFDM+ GHLPL FRTPPVSPP+ S+L G+RRVCSLE RPHL+
Sbjct: 865 ASASHTP-LAGLVRSSSWFDMHTGHLPLTFRTPPVSPPQTSYLTGLRRVCSLELRPHLLG 923
Query: 942 SPDSGLADPLLG-SGDPSAVSERSLLPPSTIYNWSCGHFSKPLLTAADDTEEILARREER 1000
SPDSGLADP+LG SG SERSLLP STIYNWSCGHFSKPLL AD EEI A+REE+
Sbjct: 924 SPDSGLADPILGVSG-----SERSLLPQSTIYNWSCGHFSKPLLGGADANEEIAAQREEK 978
Query: 1001 EKFALEHIAKCQRSSVSKLNN-PIACWDTRFEKGTKTALLQPFSPIVVAADENERIKIWN 1059
+KF+LEHIAKCQ SS+S L+N PIA WDT+FE GTKTALL PFSPIVVAADENERI++WN
Sbjct: 979 KKFSLEHIAKCQHSSISGLSNIPIANWDTKFETGTKTALLHPFSPIVVAADENERIRVWN 1038
Query: 1060 YEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCN--------GNIRIWKDYDQK 1111
YEE TLLN FDN+DFPDKGIS LCLVNELD SLLLVASCN IRIWKDY K
Sbjct: 1039 YEEATLLNGFDNNDFPDKGISNLCLVNELDDSLLLVASCNVPTLSRASFAIRIWKDYATK 1098
Query: 1112 DKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIP 1171
+QKLVT FSSIQG KPG N VVDWQQQSGYLY SGE SIM+WDL+KE Q+V +P
Sbjct: 1099 GRQKLVTGFSSIQGQKPGASGLNAVVDWQQQSGYLYVSGESLSIMVWDLDKE-QLVKSMP 1157
Query: 1172 SSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQ 1231
S CS++AL+ASQVHG QLAAGF DGSVRLYDVRTPD LVC+TRPH Q+VE+VVG+SFQ
Sbjct: 1158 FESGCSVTALSASQVHGSQLAAGFADGSVRLYDVRTPDFLVCATRPH-QRVEKVVGLSFQ 1216
Query: 1232 PGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLI 1291
PGLDPAKIVSASQAGDIQFLD+R K+ YLTIDAHRGSL+AL VHRHAPIIASGSAKQLI
Sbjct: 1217 PGLDPAKIVSASQAGDIQFLDLRRPKETYLTIDAHRGSLTALGVHRHAPIIASGSAKQLI 1276
Query: 1292 KVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344
KVFSL+GEQLG I+Y H SFM Q+IG V+CL FHPYQ+LLAAG+A + VS+++
Sbjct: 1277 KVFSLKGEQLGIIKY-HTSFMGQQIGPVSCLAFHPYQMLLAAGAAGSFVSLYT 1328
>sp|Q0IQN5|RTOR1_ORYSJ Regulatory-associated protein of TOR 1 OS=Oryza sativa subsp.
japonica GN=RAPTOR1 PE=2 SV=2
Length = 1359
Score = 1864 bits (4829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 955/1375 (69%), Positives = 1107/1375 (80%), Gaps = 54/1375 (3%)
Query: 1 MALGDLMASRFSQSAVV------------SNHLNDDCGSAHGDVDLRRDSDTASSSYTNN 48
MALGDLMASR S+ +NHL DD D RRD
Sbjct: 1 MALGDLMASRLVHSSSSSAAPSAALPNHHTNHLVDDHLPVENGPDPRRDVPDEEPPPPPP 60
Query: 49 ASVTTITTTTTTSLAYLPQTVVLCELRHEAFE--ASTPSGPSDSGLVSKWRPKDRMKTGC 106
V A LPQ VVLCE RHE F+ A+ +GPS SG VSKWRPKDRMKTGC
Sbjct: 61 PQV-----------ALLPQVVVLCEQRHEGFDEAAAAAAGPSTSGPVSKWRPKDRMKTGC 109
Query: 107 VALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGKNLSQQYERWQPRARY 166
VALVLCLNISVDPPDVIKISPCAR ECWIDPFSMAP KALETIGK L QYERWQP+ARY
Sbjct: 110 VALVLCLNISVDPPDVIKISPCARKECWIDPFSMAPPKALETIGKTLHSQYERWQPKARY 169
Query: 167 KVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEIWLFNK----YIPLPI 222
K+QLDPT++EVKKLCNTCR++A+ ERVLFHYNGHGVPKPTANGEIW+FNK YIPLPI
Sbjct: 170 KLQLDPTLEEVKKLCNTCRKFARTERVLFHYNGHGVPKPTANGEIWVFNKSYTQYIPLPI 229
Query: 223 SDLDSWLKTPSIYVFDCSAAGMIVNAFIELHDWGASNYSGSTRDCILLAACEAHETLPQS 282
+DLDSWLKTPSIYVFDCSAAGMIV AF+E DW +S+ + S++DCILLAACEAH+TLPQS
Sbjct: 230 TDLDSWLKTPSIYVFDCSAAGMIVKAFLERLDWSSSSSASSSKDCILLAACEAHQTLPQS 289
Query: 283 EEFPADVFTSCLTTPITMALRWFCKRSLLHESLDYSLIDKIPGRQTDRRTLLGELNWIFT 342
EFPADVFT+CLTTPI MAL WFC RSLL +S++++LID+IPGRQ DR+TLLGELNWIFT
Sbjct: 290 AEFPADVFTACLTTPIKMALHWFCNRSLLRDSMEHNLIDQIPGRQNDRKTLLGELNWIFT 349
Query: 343 AVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISHPMLPPTHQHH 402
A+TDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPIS+P+LPPTHQHH
Sbjct: 350 AITDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISYPLLPPTHQHH 409
Query: 403 MWDAWDMAAEICLSQLPSLVADPNAEYQPSPFFSEQLTAFEVWLDHGSEHKKPPEQLPIV 462
MWDAWDMAAEICLS+LP L+ADPNAE+QPSPFF+EQLTAFEVWLDHGSE KKPPEQLPIV
Sbjct: 410 MWDAWDMAAEICLSKLPQLIADPNAEFQPSPFFTEQLTAFEVWLDHGSEDKKPPEQLPIV 469
Query: 463 LQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTTTPELRQILVFIWT 522
LQVLLSQ HRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQT+ ELRQILVFIWT
Sbjct: 470 LQVLLSQSHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLLQTSAMELRQILVFIWT 529
Query: 523 KILALDKSCQVDLVKDGGHAYFIRFLDSMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEA 582
KIL+LDKSCQVDLVKDGGHAYFIRFLDS++AYPEQRAMAAFVLAVIVDGHR GQEAC A
Sbjct: 530 KILSLDKSCQVDLVKDGGHAYFIRFLDSLDAYPEQRAMAAFVLAVIVDGHRIGQEACANA 589
Query: 583 GLIHVCLKHLQGSMPNDAQTEPLFLQWLCLCLGKLWEDFTEAQTIGRRADAPAIYVPLLS 642
GLI VCL+HLQ PNDAQTEPL LQWLCLCLGKLWEDF EAQ +G +++AP I + LLS
Sbjct: 590 GLIDVCLRHLQPENPNDAQTEPLLLQWLCLCLGKLWEDFPEAQLLGLQSNAPEIVICLLS 649
Query: 643 EPQPEVRASAVFSLGTLLDIGFDSCRDGVEGDEECDDDEKIRAEISIIRSLLTVVSDGSP 702
EPQPEVRASAVF+LG L+DIG S + ++ DEK+RAEI+++RSLL + SDGSP
Sbjct: 650 EPQPEVRASAVFALGNLVDIGSPSLNGADDDSDD---DEKVRAEINVVRSLLQISSDGSP 706
Query: 703 LVRAEVAVALARFAFGHKQHLKSIAAAYSKPQSNSLLGSLPSLAHIKTTG---------S 753
LVR+EVAVAL RFA GH +H+KS+AA Y KPQ+NSLL SLPSLA+I ++
Sbjct: 707 LVRSEVAVALTRFAMGHNKHIKSVAAEYWKPQTNSLLKSLPSLANINSSNVYSPSSLIQG 766
Query: 754 GSIVSSQIGPLTRVG--NEAVVRDGRVSTSSPLANAGLMHGSPLSDDSSQHSDSGI-LND 810
S ++S IGP+ RVG N A RDGR+STSSP+A +MHGSP SDDSSQHSDSGI L +
Sbjct: 767 SSGLASHIGPVLRVGSDNSATARDGRISTSSPIATNSIMHGSPQSDDSSQHSDSGILLRE 826
Query: 811 GVSNGVVNHMRPKPLDSAIYSQCVLAMCTLAKDPSPRIATLGRRVLSIIGIEQVVTKPVM 870
SNG +N+ R +P+D+ IYSQ + MC +AKDP PRIA++G+R LS+IG+EQV +
Sbjct: 827 NASNGGLNYSRSRPIDNGIYSQFIATMCNVAKDPYPRIASIGKRALSLIGVEQVSMRNSR 886
Query: 871 SMGNTSRPGDPTTAAPTPSLAGLVRSSSWFDMNGGHLPLKFRTPPVSPPRQSFLPGMRRV 930
+ PG+ T+ P S G+ RSSSWFDMN G+ + FRTPPVSPP+ +L G+RRV
Sbjct: 887 LSNGGAHPGE--TSVPPSSNFGMARSSSWFDMNSGNFSVAFRTPPVSPPQHDYLTGLRRV 944
Query: 931 CSLEFRPHLINSPDSGLADPLLGSGDPSAVSERSLLPPSTIYNWSCGHFSKPLLTAADDT 990
CS+EFRPH++NSPD GLADPLL S + +LP S IY WSCGHFS+PLLT +DD
Sbjct: 945 CSMEFRPHVLNSPD-GLADPLLSSSAAPSNMGLYILPQSLIYRWSCGHFSRPLLTGSDDN 1003
Query: 991 EEILARREEREKFALEHIAKCQRSSVSKLNNPIACWDTRFEKGTKTALLQPFSPIVVAAD 1050
EE ARREERE+ A++ IAKCQRSS K+ + IA WDTRFE GTK +LL PFSPIVVAAD
Sbjct: 1004 EEANARREERERIAMDCIAKCQRSSC-KMTSQIASWDTRFELGTKASLLLPFSPIVVAAD 1062
Query: 1051 ENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKDYDQ 1110
ENE+I++WNY++ +N+F+NH D+G+SKL L+NELD SLLLV S +GN+RIW++Y Q
Sbjct: 1063 ENEQIRVWNYDDALPVNTFENHKLSDRGLSKLLLINELDDSLLLVGSSDGNVRIWRNYTQ 1122
Query: 1111 KDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPI 1170
K QKLVTAFSS+QG++ R ++V DWQQQSGYLYASG++SSI++WDL+KEQ VN I
Sbjct: 1123 KGGQKLVTAFSSVQGYRSAGR--SIVFDWQQQSGYLYASGDMSSILVWDLDKEQ--VNTI 1178
Query: 1171 PSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISF 1230
S++D ISAL+ASQV GQ AAGF+D SVR++DVRTPD LV + RPH + E+VVGI F
Sbjct: 1179 QSTADSGISALSASQVRCGQFAAGFLDASVRIFDVRTPDRLVYTARPHAPRSEKVVGIGF 1238
Query: 1231 QPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQL 1290
QPG DP KIVSASQAGDIQFLD+R + YLTI+AHRGSL+ALAVHRHAP+IASGSAKQ+
Sbjct: 1239 QPGFDPYKIVSASQAGDIQFLDVRRASEPYLTIEAHRGSLTALAVHRHAPVIASGSAKQM 1298
Query: 1291 IKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSAD-ACVSIHS 1344
IKVFSLEGEQL IRY PSFM Q+IGSVNCL+FH Y+ LLAAG+ D A VSI++
Sbjct: 1299 IKVFSLEGEQLTIIRY-QPSFMGQRIGSVNCLSFHRYKSLLAAGAGDNALVSIYA 1352
>sp|C7J8E5|RTOR2_ORYSJ Regulatory-associated protein of TOR 2 OS=Oryza sativa subsp.
japonica GN=RAPTOR2 PE=2 SV=2
Length = 1218
Score = 1732 bits (4485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 869/1222 (71%), Positives = 1017/1222 (83%), Gaps = 28/1222 (2%)
Query: 140 MAPQKALETIGKNLSQQYERWQPRARYKVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNG 199
MAP KALETIGK L QYERWQP+ARYK+QLDPT++EVKKLCNTCR++A+ ERVLFHYNG
Sbjct: 1 MAPPKALETIGKTLHSQYERWQPKARYKLQLDPTLEEVKKLCNTCRKFARTERVLFHYNG 60
Query: 200 HGVPKPTANGEIWLFNK----YIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAFIELHDW 255
HGVPKPTANGEIW+FNK YIPLPI+DLDSWLKTPSIYVFDCSAAGMIV AF+E DW
Sbjct: 61 HGVPKPTANGEIWVFNKSYTQYIPLPITDLDSWLKTPSIYVFDCSAAGMIVKAFLERLDW 120
Query: 256 GASNYSGSTRDCILLAACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSLLHESL 315
+S+ + S++DCILLAACEAH+TLPQS EFPADVFT+CLTTPI MAL WFC RSLL +S+
Sbjct: 121 SSSSSASSSKDCILLAACEAHQTLPQSAEFPADVFTACLTTPIKMALHWFCNRSLLRDSM 180
Query: 316 DYSLIDKIPGRQTDRRTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNF 375
+++LID+IPGRQ DR+TLLGELNWIFTA+TDTIAWNVLPHDLFQRLFRQDLLVASLFRNF
Sbjct: 181 EHNLIDQIPGRQNDRKTLLGELNWIFTAITDTIAWNVLPHDLFQRLFRQDLLVASLFRNF 240
Query: 376 LLAERIMRSANCSPISHPMLPPTHQHHMWDAWDMAAEICLSQLPSLVADPNAEYQPSPFF 435
LLAERIMRSANCSPIS+P+LPPTHQHHMWDAWDMAAEICLS+LP L+ADPNAE+QPSPFF
Sbjct: 241 LLAERIMRSANCSPISYPLLPPTHQHHMWDAWDMAAEICLSKLPQLIADPNAEFQPSPFF 300
Query: 436 SEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALS 495
+EQLTAFEVWLDHGSE KKPPEQLPIVLQVLLSQ HRFRALVLLGRFLDMGPWAVDLALS
Sbjct: 301 TEQLTAFEVWLDHGSEDKKPPEQLPIVLQVLLSQSHRFRALVLLGRFLDMGPWAVDLALS 360
Query: 496 VGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRFLDSMEAYP 555
VGIFPYVLKLLQT+ ELRQILVFIWTKIL+LDKSCQVDLVKDGGHAYFIRFLDS++AYP
Sbjct: 361 VGIFPYVLKLLQTSAMELRQILVFIWTKILSLDKSCQVDLVKDGGHAYFIRFLDSLDAYP 420
Query: 556 EQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLFLQWLCLCLG 615
EQRAMAAFVLAVIVDGHR GQEAC AGLI+VCL+HLQ PNDAQTEPL LQWLCLCLG
Sbjct: 421 EQRAMAAFVLAVIVDGHRVGQEACANAGLIYVCLRHLQPENPNDAQTEPLLLQWLCLCLG 480
Query: 616 KLWEDFTEAQTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGFDSCRDGVEGDE 675
KLWEDF EAQ +G +++AP I + LLSEPQPEVRASAVF+LG L+DIG S + +
Sbjct: 481 KLWEDFPEAQLLGLQSNAPEIVICLLSEPQPEVRASAVFALGNLVDIGSPSLNGADDDSD 540
Query: 676 ECDDDEKIRAEISIIRSLLTVVSDGSPLVRAEVAVALARFAFGHKQHLKSIAAAYSKPQS 735
+ DEK+RAEI+++RSLL + SDGSPLVR+EVAVAL RFA GH +H+KS+AA Y KPQ+
Sbjct: 541 D---DEKVRAEINVVRSLLQISSDGSPLVRSEVAVALTRFAMGHNKHIKSVAAEYWKPQT 597
Query: 736 NSLLGSLPSLAHIKTTG---------SGSIVSSQIGPLTRVG--NEAVVRDGRVSTSSPL 784
NSLL SLPSLA+I ++ S ++S IGP+ RVG N A RDGR+STSSP+
Sbjct: 598 NSLLKSLPSLANINSSNVYSPSSLIQGSSGLASHIGPVLRVGSDNSATARDGRISTSSPI 657
Query: 785 ANAGLMHGSPLSDDSSQHSDSGI-LNDGVSNGVVNHMRPKPLDSAIYSQCVLAMCTLAKD 843
A +MHGSP SDDSSQHSDSGI L + SNG +N+ R +P+D+ IYSQ + MC +AKD
Sbjct: 658 ATNSIMHGSPQSDDSSQHSDSGILLRENASNGGLNYSRSRPIDNGIYSQFIATMCNVAKD 717
Query: 844 PSPRIATLGRRVLSIIGIEQVVTKPVMSMGNTSRPGDPTTAAPTPSLAGLVRSSSWFDMN 903
P PRIA++G+R LS+IG+EQV + + PG+ T+ P S G+ RSSSWFDMN
Sbjct: 718 PYPRIASIGKRALSLIGVEQVSMRNSRLSNGGAHPGE--TSVPPSSNFGMARSSSWFDMN 775
Query: 904 GGHLPLKFRTPPVSPPRQSFLPGMRRVCSLEFRPHLINSPDSGLADPLLGSGDPSAVSER 963
G+ + FRTPPVSPP+ +L G+RRVCS+EFRPH++NSPD GLADPLL S +
Sbjct: 776 SGNFSMAFRTPPVSPPQHDYLTGLRRVCSMEFRPHVLNSPD-GLADPLLSSSAAPSNMGL 834
Query: 964 SLLPPSTIYNWSCGHFSKPLLTAADDTEEILARREEREKFALEHIAKCQRSSVSKLNNPI 1023
+LP S IY WSCGHFS+PLLT +DD EE ARREERE+ A++ IAKCQRSS K+ + I
Sbjct: 835 DILPQSLIYRWSCGHFSRPLLTGSDDNEEANARREERERIAMDCIAKCQRSSC-KMTSQI 893
Query: 1024 ACWDTRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLC 1083
A WDTRFE GTK +LL PFSPIVVAADENE+I++WNY++ +N+F+NH D+G+SKL
Sbjct: 894 ASWDTRFELGTKASLLLPFSPIVVAADENEQIRVWNYDDALPVNTFENHKLSDRGLSKLL 953
Query: 1084 LVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQS 1143
L+NELD SLLLV S +GN+RIW++Y QK QKLVTAFSS+QG++ R ++V DWQQQS
Sbjct: 954 LINELDDSLLLVGSSDGNVRIWRNYTQKGGQKLVTAFSSVQGYRSAGR--SIVFDWQQQS 1011
Query: 1144 GYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLY 1203
GYLYASG++SSI++WDL+KE Q+VN I S++D ISAL+ASQV GQ AAGF+D SVR++
Sbjct: 1012 GYLYASGDMSSILVWDLDKE-QLVNTIQSTADSGISALSASQVRCGQFAAGFLDASVRIF 1070
Query: 1204 DVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTI 1263
DVRTPD LV + RPH + E+VVGI FQPG DP KIVSASQAGDIQFLD+R + YLTI
Sbjct: 1071 DVRTPDRLVYTARPHAPRSEKVVGIGFQPGFDPYKIVSASQAGDIQFLDVRRASEPYLTI 1130
Query: 1264 DAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLT 1323
+AHRGSL ALAVHRHAP+IASGSAKQ+IKVFSLEGEQL IRY PSFM Q+IGSVNCL+
Sbjct: 1131 EAHRGSLMALAVHRHAPVIASGSAKQMIKVFSLEGEQLTIIRY-QPSFMGQRIGSVNCLS 1189
Query: 1324 FHPYQVLLAAGSAD-ACVSIHS 1344
FH Y+ LLAAG+ D A VSI++
Sbjct: 1190 FHRYKSLLAAGAGDNALVSIYA 1211
>sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1
SV=1
Length = 1335
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/1325 (42%), Positives = 763/1325 (57%), Gaps = 112/1325 (8%)
Query: 92 LVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGK 151
L WR KDRMKT VALVLCLN+ VDPPDV+K +PCAR+ECWIDP SM PQKALETIG
Sbjct: 45 LAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGA 104
Query: 152 NLSQQYERWQPRARYKVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEI 211
NL +QYE WQPRARYK LDPTVDEVKKLC + RR AK ERVLFHYNGHGVP+PT NGE+
Sbjct: 105 NLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEV 164
Query: 212 WLFNK----YIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAFIEL--------------- 252
W+FNK YIPL I DL +W+ +PSI+V+DCS AG+IV +F +
Sbjct: 165 WVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINP 224
Query: 253 -HDWGASNYSGSTRDCILLAACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSL- 310
H S ++CI LAACEA E LP + PAD+FTSCLTTPI +ALRWFC +
Sbjct: 225 NHPLAQMPLPPSMKNCIQLAACEATELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCV 284
Query: 311 -LHESLDYSLIDKIPGRQTDRRTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVA 369
L + LI+KIPGR DRRT LGELNWIFTA+TDTIAWNVLP DLFQ+LFRQDLLVA
Sbjct: 285 SLVPGVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVA 344
Query: 370 SLFRNFLLAERIMRSANCSPISHPMLPPTHQHHMWDAWDMAAEICLSQLPSLVADPNAEY 429
SLFRNFLLAERIMRS NC+P+S P LPPT+ H MW AWD+A +ICLSQLP+++ + A +
Sbjct: 345 SLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTA-F 403
Query: 430 QPSPFFSEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWA 489
+ SPFF+EQLTAF+VWL G E++ PPEQLPIVLQVLLSQ HR RAL LLGRFLD+GPWA
Sbjct: 404 RHSPFFAEQLTAFQVWLTMGVENRNPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWA 463
Query: 490 VDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRFLD 549
V LALSVGIFPYVLKLLQ++ ELR +LVFIW KILA+D SCQ DLVKD GH YF+ L
Sbjct: 464 VSLALSVGIFPYVLKLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLA 523
Query: 550 SMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLFLQW 609
E R M AF+LAVIV+ + GQEAC++ LI +CL+ L ND PL QW
Sbjct: 524 DPYMPAEHRTMTAFILAVIVNSYHTGQEACLQGNLIAICLEQL-----NDPH--PLLRQW 576
Query: 610 LCLCLGKLWEDFTEAQTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGFDSCRD 669
+ +CLG++W++F A+ G R A LLS+P PEVR +AVF+LGT +
Sbjct: 577 VAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVG-------- 628
Query: 670 GVEGDEECDDDEKIRAEISIIRSLLTVVSDGSPLVRAEVAVALARFAFGHKQHLKSIAAA 729
E D I ++++ L +VSDGSP+VR E+ VAL+ ++ + ++A
Sbjct: 629 --NSAERTDHSTTIDHNVAMM--LAQLVSDGSPMVRKELVVALSHLVVQYESNFCTVALQ 684
Query: 730 YSKPQSNSLLGSLPSLAHIKTTGSGSIVSSQIGPLT-------RVGNEAVVRDGRVSTSS 782
+ + + N +LPS A TT GS+ + P T GN V R S +
Sbjct: 685 FIEEEKNY---ALPSPA---TTEGGSLTPVRDSPCTPRLRSVSSYGNIRAVATAR-SLNK 737
Query: 783 PLANAGLMHGS--------------------PLSDDSSQHSDSGILNDGV----SNGVVN 818
L N L S S ++ +H S D + S +N
Sbjct: 738 SLQNLSLTEESGGAVAFSPGNLSTSSSASSTLGSPENEEHILSFETIDKMRRASSYSSLN 797
Query: 819 HMRPKPLDSAIYSQCVLAMCTLAKDPSPRIATLGRRVLSIIGIEQVVTKPVMSMGNTSRP 878
+ +S +Y+Q + LA DP P ++ + +VL+ I + V + +TS
Sbjct: 798 SLIGVSFNS-VYTQIWRVLLHLAADPYPEVSDVAMKVLNSIAYKATVNARPQRVLDTSSL 856
Query: 879 GDPTTAAPTPSLAGLVRSSS---WFDMNGGHLPLKFRTPPVSPPRQSFLPGMRRVCSLEF 935
A+PT + ++ + L PVS S PG ++
Sbjct: 857 TQSAPASPTNKGVHIHQAGGSPPASSTSSSSLTNDVAKQPVSRDLPSGRPGTTGPAGAQY 916
Query: 936 RPH----------LINSPDSGLADPLLGSGDPSAVSERSLLPPSTIYNWSCGHFSKPLLT 985
PH P+ D +G S +S + +WS +F++P++
Sbjct: 917 TPHSHQFPRTRKMFDKGPEQTADDADDAAGHKSFISATV---QTGFCDWSARYFAQPVMK 973
Query: 986 AADDTEEILARREEREKFALEHIAKCQRSSVSKLNNPIACWDTRF----EKGTKTAL-LQ 1040
++ + R+ERE L + ++ +R + + I D + G + +
Sbjct: 974 IPEEHDLESQIRKEREWRFLRN-SRVRRQAQQVIQKGITRLDDQIFLNRNPGVPSVVKFH 1032
Query: 1041 PFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNG 1100
PF+P + AD++ I W++E+ L+ F N + ++ + +N D SLLL A+ +G
Sbjct: 1033 PFTPCIAVADKDS-ICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLNGQDCSLLLTATDDG 1091
Query: 1101 NIRIWKDY-DQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWD 1159
IR+WK++ D + ++VTA+ + P R + +VVDW+Q++G L +SG+V + +WD
Sbjct: 1092 AIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGLLMSSGDVRIVRIWD 1151
Query: 1160 LEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHT 1219
++E + V IP+ +D +++L+ H + AG DGS+R+YD R + C +
Sbjct: 1152 TDREMK-VQDIPTGADSCVTSLSCDS-HRSLIVAGLGDGSIRVYDRRMA-LSECRVMTYR 1208
Query: 1220 QQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHA 1279
+ VV S Q D IVS S GD++ D R ++ + +G L+AL +H A
Sbjct: 1209 EHTAWVVKASLQKRPD-GHIVSVSVNGDVRIFDPR-MPESVNVLQIVKG-LTALDIHPQA 1265
Query: 1280 PIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADAC 1339
+IA GS Q +++ GE + I+Y+ FM Q++G+++CL FHP+ LA GS D
Sbjct: 1266 DLIACGSVNQFTAIYNSSGELINNIKYYD-GFMGQRVGAISCLAFHPHWPHLAVGSNDYY 1324
Query: 1340 VSIHS 1344
+S++S
Sbjct: 1325 ISVYS 1329
>sp|Q8K4Q0|RPTOR_MOUSE Regulatory-associated protein of mTOR OS=Mus musculus GN=Rptor PE=1
SV=1
Length = 1335
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/1341 (41%), Positives = 762/1341 (56%), Gaps = 144/1341 (10%)
Query: 92 LVSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGK 151
L WR KDRMKT VALVLCLN+ VDPPDV+K +PCAR+ECWIDP SM PQKALETIG
Sbjct: 45 LAQSWRMKDRMKTVSVALVLCLNVGVDPPDVVKTTPCARLECWIDPLSMGPQKALETIGA 104
Query: 152 NLSQQYERWQPRARYKVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEI 211
NL +QYE WQPRARYK LDPTVDEVKKLC + RR AK ERVLFHYNGHGVP+PT NGE+
Sbjct: 105 NLQKQYENWQPRARYKQSLDPTVDEVKKLCTSLRRNAKEERVLFHYNGHGVPRPTVNGEV 164
Query: 212 WLFNK----YIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAFIEL--------------- 252
W+FNK YIPL I DL +W+ +PSI+V+DCS AG+IV +F +
Sbjct: 165 WVFNKNYTQYIPLSIYDLQTWMGSPSIFVYDCSNAGLIVKSFKQFALQREQELEVAAINP 224
Query: 253 -HDWGASNYSGSTRDCILLAACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSL- 310
H S ++CI LAACEAHE LP + PAD+FTSCLTTPI +ALRWFC +
Sbjct: 225 NHPLAQMPLPPSMKNCIQLAACEAHELLPMIPDLPADLFTSCLTTPIKIALRWFCMQKCV 284
Query: 311 -LHESLDYSLIDKIPGRQTDRRTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVA 369
L + LI+KIPGR DRRT LGELNWIFTA+TDTIAWNVLP DLFQ+LFRQDLLVA
Sbjct: 285 SLVPGVTLDLIEKIPGRLNDRRTPLGELNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVA 344
Query: 370 SLFRNFLLAERIMRSANCSPISHPMLPPTHQHHMWDAWDMAAEICLSQLPSLVADPNAEY 429
SLFRNFLLAERIMRS NC+P+S P LPPT+ H MW AWD+A +ICLSQLP+++ + A +
Sbjct: 345 SLFRNFLLAERIMRSYNCTPVSSPRLPPTYMHAMWQAWDLAVDICLSQLPTIIEEGTA-F 403
Query: 430 QPSPFFSEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWA 489
+ SPFF+EQLTAF+VWL G E++ PPEQLPIVLQVLLSQ HR RAL LLGRFLD+GPWA
Sbjct: 404 RHSPFFAEQLTAFQVWLTMGVENRSPPEQLPIVLQVLLSQVHRLRALDLLGRFLDLGPWA 463
Query: 490 VDLALSVGIFPYVLKLLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRFLD 549
V LALSVGIFPYVLKLLQ++ ELR +LVFIW KILA+D SCQ DLVKD GH YF+ L
Sbjct: 464 VSLALSVGIFPYVLKLLQSSARELRPLLVFIWAKILAVDSSCQADLVKDNGHKYFLSVLA 523
Query: 550 SMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLFLQW 609
E R M AF+LAVIV+ + GQEAC++ LI +CL+ L + PL QW
Sbjct: 524 DPYMPAEHRTMTAFILAVIVNSYTTGQEACLQGNLIAICLEQL-------SDPHPLLRQW 576
Query: 610 LCLCLGKLWEDFTEAQTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGFDSCRD 669
+ +CLG++W++F A+ G R A LLS+P PEVR +AVF+LGT +
Sbjct: 577 VAICLGRIWQNFDSARWCGVRDSAHEKLYSLLSDPIPEVRCAAVFALGTFVG-------- 628
Query: 670 GVEGDEECDDDEKIRAEISIIRSLLTVVSDGSPLVRAEVAVALARFAFGHKQHLKSIAAA 729
E D I ++++ L +++DGSP+VR E+ VAL+ ++ + ++A
Sbjct: 629 --NSAERTDHSTTIDHNVAMM--LAQLINDGSPMVRKELVVALSHLVVQYESNFCTVALQ 684
Query: 730 YSKPQSNSLLGSLPSLAHIKTTGSGSIVSSQIGPLT-RVGNEAVVRDGRVSTSSPLANAG 788
+ + + N LPS A T GS+ + P T R+ + + + R T++ N
Sbjct: 685 FMEEEKNY---PLPSPA---ATEGGSLTPVRDSPCTPRLRSVSSYGNIRAVTTARNLNKS 738
Query: 789 LMHGSPLSDDSSQHSDSGILNDG------------------VSNGVVNHMRPKPLDSA-- 828
L + S L+++S N +S ++ MR SA
Sbjct: 739 LQNLS-LTEESGSSVAFSPGNLSTSSSASSTLGSPENEEYILSFETIDKMRRVSSYSALN 797
Query: 829 ---------IYSQCVLAMCTLAKDPSPRIATLGRRVLSIIGIEQVVTKPVMSMGNTSRPG 879
+Y+Q + LA DP P ++ L +VL+ I + V + +TS
Sbjct: 798 SLIGVSFNSVYTQIWRVLLHLAADPYPDVSDLAMKVLNSIAYKATVNARPQRILDTSSLT 857
Query: 880 DPTTAAPTPSLAGLVRSSSWFDMNGGHLPLKFRTPPVSPPRQSFL--------------- 924
A+PT G H+ +PP S L
Sbjct: 858 QSAPASPT--------------NKGMHMHQVGGSPPASSTSSCSLTNDVAKQTVSRDLPS 903
Query: 925 --PGMRRVCSLEFRPH----------LINSPDSGLADPLLGSGDPSAVSERSLLPPSTIY 972
PG ++ PH PD D +G S + +
Sbjct: 904 SRPGTAGPTGAQYTPHSHQFPRTRKMFDKGPDQTTDDADDAAGHKSFICASM---QTGFC 960
Query: 973 NWSCGHFSKPLLTAADDTEEILARREERE-KFALEHIAKCQ-----RSSVSKLNNPIACW 1026
+WS +F++ ++ ++ + R+ERE +F + Q + +++L++ I +
Sbjct: 961 DWSARYFAQAVMKIPEEHDLESQIRKEREWRFLRNTRVRKQAQQVIQKGITRLDDQI--F 1018
Query: 1027 DTRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVN 1086
R PF+P + AD++ I W++E+ L+ F N + ++ + +N
Sbjct: 1019 LNRNPGVPSVVKFHPFTPCIAVADKDS-ICFWDWEKGEKLDYFHNGNPRYTRVTAMEYLN 1077
Query: 1087 ELDVSLLLVASCNGNIRIWKDY-DQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGY 1145
D SLLL A+ +G IR+WK++ D + ++VTA+ + P R + +VVDW+Q++G
Sbjct: 1078 GQDCSLLLTATDDGAIRVWKNFADLEKNPEMVTAWQGLSDMLPTTRGAGMVVDWEQETGL 1137
Query: 1146 LYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDV 1205
L +SG+V + +WD ++E + V IP+ +D +++L+ H + AG DGS+R+YD
Sbjct: 1138 LMSSGDVRIVRIWDTDRETK-VQDIPTGADSCVTSLSCDS-HRSLIVAGLGDGSIRVYDR 1195
Query: 1206 RTP--DMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTI 1263
R + V + R HT V + G IVS S GD++F D R ++ +
Sbjct: 1196 RMALSECRVMTYREHTAWVVKAYLQKHPEG----HIVSVSVNGDVRFFDPR-MPESVNVM 1250
Query: 1264 DAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLT 1323
+G L+AL +H A +IA GS Q +++ GE + I+Y+ FM Q++G+++CL
Sbjct: 1251 QIVKG-LTALDIHPQANLIACGSMNQFTAIYNGNGELINNIKYYD-GFMGQRVGAISCLA 1308
Query: 1324 FHPYQVLLAAGSADACVSIHS 1344
FHP+ LA GS D +S++S
Sbjct: 1309 FHPHWPHLAVGSNDYYISVYS 1329
>sp|P87141|MIP1_SCHPO WD repeat-containing protein mip1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mip1 PE=1 SV=1
Length = 1313
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/767 (47%), Positives = 470/767 (61%), Gaps = 82/767 (10%)
Query: 21 LNDDCGSAHGDVDLRRD------SDTASSSYTNNASVTTITTTTTTS------------- 61
+ND G RR ++T S YT N+++ T T S
Sbjct: 1 MNDRISEVSGSSRARRSVLSYGTTETGSDRYTENSNIATENGVDTASSMIDGIQSGFPQP 60
Query: 62 -------------LAYLPQTVVL--CELRHEAFEASTPSGPSDSGLVSKWRPKDRMKTGC 106
+ L Q + + RH + + P+++ + WR ++R+KT
Sbjct: 61 RHGFEEEYNNAEYINMLEQVFYMYYTDKRHRGVISKKNAEPTET--IHDWRMRERLKTVS 118
Query: 107 VALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGKNLSQQYERWQPRARY 166
AL++CLNI VDPPDVIK +P A+ ECWIDPFS+ KALE IGKNL QQYE R RY
Sbjct: 119 AALLVCLNIGVDPPDVIKPNPAAKYECWIDPFSLPASKALEAIGKNLQQQYETLSMRTRY 178
Query: 167 KVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEIWLFNK----YIPLPI 222
+ LDP ++EVKKLC RR AK ER+LFHYNGHGVP PTA+GEIW+FNK YIP+ +
Sbjct: 179 RHYLDPAIEEVKKLCIGQRRNAKEERILFHYNGHGVPMPTASGEIWVFNKNYTQYIPVSL 238
Query: 223 SDLDSWLKTPSIYVFDCSAAGMIV---NAFIELHDWGASNYSG---------STRDCILL 270
DL SWL P IYV+DCSAAG I+ N F E D A + S CI L
Sbjct: 239 YDLQSWLGAPCIYVYDCSAAGNIIVNFNRFAEQRDKEALRIAKQNPNVLAMPSHTSCIQL 298
Query: 271 AACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSLLHESLDYSLIDKIPGRQTDR 330
AAC ETLP + + PAD+FTSCLT+PI +++RW+ ++ L+ +++ KIPGR DR
Sbjct: 299 AACGPKETLPMNPDLPADLFTSCLTSPIEISVRWYVLQNPFPNKLNLNMLLKIPGRLQDR 358
Query: 331 RTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPI 390
RT LGELNWIFTA+TDTIAWNV P LF+RLFRQDL+VA+LFRNFLLAERIM +C P
Sbjct: 359 RTPLGELNWIFTAITDTIAWNVFPKHLFRRLFRQDLMVAALFRNFLLAERIMLVHSCHPQ 418
Query: 391 SHPMLPPTHQHHMWDAWDMAAEICLSQLPSLVADPNA----EYQPSPFFSEQLTAFEVWL 446
S P LPPTH H MW++WD+A + CLSQLP ++ + EY+ S FFSEQLTAFEVWL
Sbjct: 419 SSPELPPTHDHPMWNSWDLAIDNCLSQLPDMLDAESKGIAYEYKHSTFFSEQLTAFEVWL 478
Query: 447 DHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLKLL 506
G +KPP+QLP+VLQVLLSQ HR RAL+LL +FLD+G WAVDLALS+GIFPYVLKLL
Sbjct: 479 SQGLISRKPPDQLPLVLQVLLSQVHRLRALILLSKFLDLGVWAVDLALSIGIFPYVLKLL 538
Query: 507 QTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRFLD-SMEAYP-----EQRAM 560
Q+ EL+ +LVFIW +ILA+D SCQ DL+KD G+ YF++ L+ + +P E RAM
Sbjct: 539 QSPAIELKPVLVFIWARILAVDDSCQADLLKDNGYGYFVQILNPNSSIFPSSNISEHRAM 598
Query: 561 AAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLFLQWLCLCLGKLWED 620
AF+L+V G +GQ AC+ ++ CL HL + L QW CLC+ +LWE+
Sbjct: 599 CAFILSVFCRGFPQGQLACLNPQVLSHCLSHLNSP-------DSLLRQWACLCISQLWEN 651
Query: 621 FTEAQTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGFDSCRDGVEGDEECDDD 680
++EA+ G R +A ++ + PEVRAS + + T L GF +
Sbjct: 652 YSEAKWSGTRDNAHVKLAEIIVDSVPEVRASVLTAFTTFL--GFPE-----------KTE 698
Query: 681 EKIRAEISIIRSLLTVVSDGSPLVRAEVAVALARFAFGHKQHLKSIA 727
E + E I + L +SD SPLVR E+ + L+ F +K+ L +A
Sbjct: 699 EVVAVETYIAIAALAALSDASPLVRHELVIFLSHFVVNYKKQLMVVA 745
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 236/468 (50%), Gaps = 50/468 (10%)
Query: 889 SLAGLVRSSSWFDMNGGHLPLKFRTPPVSPPRQSFLPGMRRVCSLEFRPHLINSPDSGLA 948
SLAG R+S +NG + P + ++ + +PG LE++ S L
Sbjct: 870 SLAGSDRASELLSLNGENKPAESNLNHLTSAK---VPGPPAFNELEYQ--------SELD 918
Query: 949 DPLLGSGDPSAVSERSLLPPSTIYNWSCGHFSKPLLTAADDTE-------EILARREERE 1001
PL S +++WS +F++P + +D E + L RR E
Sbjct: 919 MPL----------------TSYLFDWSRKYFTEPQMRPNEDDEPGSICYNQRLWRRNRNE 962
Query: 1002 KFALEHIAKCQRSSVSKLNNPIACWDTRFEKGTKTALLQPFSPIVVAADENERIKIWNYE 1061
K + S+ + N + ++ + + F ++ + + I++W++
Sbjct: 963 KLIYRTRPLAEYSTNGRWNQQLMTFNNTI--APRKLMFHQFEDQLITLGDKDIIQVWDWR 1020
Query: 1062 EDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFS 1121
+ LNSF ++ + L+NE DV+LL+ S +G I++++DY + +K +LVT+++
Sbjct: 1021 RNRCLNSFKTSASATTNVTDMQLLNEDDVALLMTGSSDGTIKLYRDY-ENEKVELVTSWN 1079
Query: 1122 SIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISAL 1181
S+ G R +++++ WQQ G+L +G+V I +WD KE N +P S SI++L
Sbjct: 1080 SLSDLVFGDRNASLLMSWQQNCGHLLVAGDVRVIRIWDASKEICYAN-LPVRSSNSITSL 1138
Query: 1182 TASQVHGGQLAAGFVDGSVRLYDVRTP--DMLVCSTRPHTQQVERVVGISFQPGLDPAKI 1239
T+ V + AGF DG +R+YD R P D L + H+ ++ V + Q ++
Sbjct: 1139 TSDLVGCNIIVAGFSDGVLRVYDKRLPARDSLTDVWKEHSSEI---VNVEMQSS-GMREL 1194
Query: 1240 VSASQAGDIQFLDIR-NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEG 1298
+SAS G+++ DIR NH + T L++L VH HAP+ A+GS+ Q IK++ G
Sbjct: 1195 ISASSDGEVKLWDIRMNH--SLQTFSTDNSGLTSLTVHSHAPVYATGSSNQSIKIWDTLG 1252
Query: 1299 EQLGTIRYHHPSFMAQ-KIGSVNCLTFHPYQVLLAAG-SADACVSIHS 1344
+ + T R +P F+ Q K S+ CL FHP+ +LLA G + D+ V+++S
Sbjct: 1253 QNINTFR-ENPRFLNQPKPSSLMCLKFHPHHLLLACGDNTDSRVNLYS 1299
>sp|Q55BR7|RPTOR_DICDI Protein raptor homolog OS=Dictyostelium discoideum GN=raptor PE=1
SV=1
Length = 1509
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/470 (57%), Positives = 345/470 (73%), Gaps = 21/470 (4%)
Query: 265 RDCILLAACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSLLHESLDYSLIDKIP 324
RDCILLAAC A+E LP + +FPAD+FT+CLTTPI +ALRWFC S+L + ++DKIP
Sbjct: 359 RDCILLAACSANEILPMNPDFPADMFTACLTTPIRIALRWFCSHSIL-TGITADMLDKIP 417
Query: 325 GRQTDRRTLLGELNWIFTAVTDTIAWNVLPHDLFQRLFRQDLLVASLFRNFLLAERIMRS 384
G + RRT LGELNWIFTAVTDTIAWNVLP LFQ+LFRQDLLVASLFRN+LLAERIMRS
Sbjct: 418 GNLSSRRTPLGELNWIFTAVTDTIAWNVLPRHLFQKLFRQDLLVASLFRNYLLAERIMRS 477
Query: 385 ANCSPISHPMLPPTHQHHMWDAWDMAAEICLSQLPSLVADPNAEYQPSPFFSEQLTAFEV 444
ANC+PIS P LPPT+QH MW AWD+A ++ +SQLP+L+ADPNAE++ SPFF+EQLTAFEV
Sbjct: 478 ANCTPISCPRLPPTYQHAMWQAWDLAVDLVISQLPTLLADPNAEFKSSPFFTEQLTAFEV 537
Query: 445 WLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLALSVGIFPYVLK 504
WL+ GSEHK PP QLPIVLQVLLSQ HR RALVLLG+FLD+GPWAV+LAL VGIFPYVLK
Sbjct: 538 WLEFGSEHKDPPAQLPIVLQVLLSQAHRLRALVLLGKFLDLGPWAVNLALCVGIFPYVLK 597
Query: 505 LLQTTTPELRQILVFIWTKILALDKSCQVDLVKDGGHAYFIRFLDSMEAYPEQRAMAAFV 564
LLQ+ +LR ILVFIW KILALDKSCQ+DLVK+ GHAYFI L S + +QR M+AFV
Sbjct: 598 LLQSPAGDLRHILVFIWAKILALDKSCQLDLVKENGHAYFISVLSSPQIPADQRTMSAFV 657
Query: 565 LAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLFLQWLCLCLGKLWEDFTEA 624
L+ I + R GQ AC+ L+ +CL L ND +P+ +W+ LC+ K+WE+F EA
Sbjct: 658 LSTICNNCRPGQNACLIGNLLPICLSQL-----NDP--DPMVRRWMILCMAKMWENFEEA 710
Query: 625 QTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGFDSCRDGVEGDEECDDDEKIR 684
+ + +A LL++ PEVRASAV +LG L+ G EG E ++
Sbjct: 711 KWAAIKENAHEKLCLLLTDVSPEVRASAVVALGELI--------GGAEGSE-----QRTN 757
Query: 685 AEISIIRSLLTVVSDGSPLVRAEVAVALARFAFGHKQHLKSIAAAYSKPQ 734
E+++ +L + +D SP+VR E+ ++L+R ++ + +A ++ +
Sbjct: 758 IELNLALTLAVITADCSPMVRKELVISLSRIVSSYESNFVQVAQEIAQEE 807
Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/161 (70%), Positives = 130/161 (80%), Gaps = 4/161 (2%)
Query: 93 VSKWRPKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGKN 152
++KWR ++RMKT VALVLCLNI VDPPDVIK PCARMECW DP + PQKAL+ IGK
Sbjct: 107 IAKWRMRERMKTVSVALVLCLNIGVDPPDVIKTFPCARMECWFDPSTQPPQKALDLIGKT 166
Query: 153 LSQQYERWQPRARYKVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGEIW 212
L QYE+WQ +ARYK LDPTV+EVKKLC + RR AK ERVLFHYNGHGVPKPT NGEIW
Sbjct: 167 LQAQYEKWQSKARYKQSLDPTVEEVKKLCLSLRRNAKDERVLFHYNGHGVPKPTTNGEIW 226
Query: 213 LFNK----YIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAF 249
+FN+ YIPL I +L +W+ TPSIYVFDCSAAG+I+N F
Sbjct: 227 VFNRNFTQYIPLSIYELQTWMGTPSIYVFDCSAAGLIINWF 267
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 213/392 (54%), Gaps = 25/392 (6%)
Query: 969 STIYNWSCGHFSKPLL-TAADDTEEILARREEREKFALEHIAKCQRSSVSKL-NNPIACW 1026
S Y WSC +FSKP++ + +D E + ++ ++ E I + + +V + P +
Sbjct: 1116 SDYYEWSCNYFSKPMMQSTGEDFESFESIEKKWKRQRNEMIIQESKEAVQNIIQQPPKSF 1175
Query: 1027 D--TRFEK--GTKTALLQ--PFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGIS 1080
T F + G + LQ PF I+V +D E I +WNY++ +N+F+N + I+
Sbjct: 1176 SQMTIFAEPNGQPISHLQFHPFDNILVVSDGLENISVWNYDDGQRINTFNNCNMSGTRIT 1235
Query: 1081 KLCLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSI-----QGHKPGVRCSNV 1135
+ LVN+ D S+++ A+ +G +RIW+ Y+ D K+V+++ + G+ P R +
Sbjct: 1236 SMKLVNDYDPSMIITAADDGVVRIWRGYESNDTLKMVSSWRAFPEFATTGNDPIGR---L 1292
Query: 1136 VVDWQQQSGYLYASGEV---SSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLA 1192
V+DW+ SG + SGE I +WD+E+E + + + S+ A++ G +
Sbjct: 1293 VLDWKGDSGLVLVSGETPDSPKIRIWDVERELGVQDIFIGTE--SVVTCMANEKRGPLFS 1350
Query: 1193 AGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLD 1252
AGF DG V+L+D R P C + T+ +V +S L +VS S G+I+F
Sbjct: 1351 AGFSDGLVKLFDQRIPGKYSCVS-TLTEHKSYIVNVSMPASLGGKTVVSGSSTGEIKFW- 1408
Query: 1253 IRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFM 1312
++ + T + +S+ +VH +AP+IA GS Q IK+ + GE + TIRYH F+
Sbjct: 1409 -QHSYECSSTTIHNNDVISSFSVHEYAPLIACGSQNQRIKIMNFTGEDVCTIRYHD-GFL 1466
Query: 1313 AQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344
Q+IG V+C+ FHPY +L+ AG+ D+ +SI++
Sbjct: 1467 GQRIGPVSCVAFHPYNILMGAGATDSIISIYN 1498
>sp|P38873|KOG1_YEAST Target of rapamycin complex 1 subunit KOG1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=KOG1 PE=1
SV=2
Length = 1557
Score = 342 bits (876), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 172/367 (46%), Positives = 232/367 (63%), Gaps = 41/367 (11%)
Query: 93 VSKWR-PKDRMKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMA-PQKALETIG 150
++ W+ KDR KT AL+LCLN+ VDPPDV+K PCAR+E W+DP + +KA+E IG
Sbjct: 70 ITDWKIMKDRQKTVSAALLLCLNLGVDPPDVMKTHPCARVEAWVDPLNFQDSKKAIEQIG 129
Query: 151 KNLSQQYERWQPRARYKVQLDPTVDEVKKLCNTCRRYAKGERVLFHYNGHGVPKPTANGE 210
KNL QYE R RYK LDP V++VK+ CN+ RR +K +R+LFHYNGHGVPKPT +GE
Sbjct: 130 KNLQAQYETLSLRTRYKQSLDPCVEDVKRFCNSLRRTSKEDRILFHYNGHGVPKPTKSGE 189
Query: 211 IWLFNK----YIPLPISDLDSWLKTPSIYVFDCSAAGMIVNAFIEL------------HD 254
IW+FN+ YIP+ + DL +WL P I+V+DC++A I+ F + HD
Sbjct: 190 IWVFNRGYTQYIPVSLYDLQTWLGAPCIFVYDCNSAENILINFQKFVQKRIKDDEEGNHD 249
Query: 255 WGASNYSGSTRDCILLAACEAHETLPQSEEFPADVFTSCLTTPITMALRWFCKRSLLHES 314
A + + + +DC LA+C + E L S E PAD+F+ CLT PI +++R F +S L +S
Sbjct: 250 VAAPSPTSAYQDCFQLASCTSDELLLMSPELPADLFSCCLTCPIEISIRIFLMQSPLKDS 309
Query: 315 LDYSLID----------------------KIPGRQTDRRTLLGELNWIFTAVTDTIAWNV 352
+ IPG +DRRT LGELNWIFTA+TDTIAW
Sbjct: 310 KYKIFFENSTSNQPFGDSKNSFKSKIPNVNIPGMLSDRRTPLGELNWIFTAITDTIAWTS 369
Query: 353 LPHDLFQRLFRQDLLVASLFRNFLLAERIMRSANCSPISHPMLPPT-HQHHMWDAWDMAA 411
LP LF++LFR DL++A+LFRNFLLA+RIM NC P+S P LP + H MW +WD+A
Sbjct: 370 LPRPLFKKLFRHDLMIAALFRNFLLAKRIMPWYNCHPVSDPELPDSITTHPMWKSWDLAM 429
Query: 412 EICLSQL 418
+ L+++
Sbjct: 430 DEVLTKI 436
Score = 163 bits (412), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 94/116 (81%), Gaps = 1/116 (0%)
Query: 434 FFSEQLTAFEVWLDHGSEHKKPPEQLPIVLQVLLSQCHRFRALVLLGRFLDMGPWAVDLA 493
FF + LTAFE+WL + S + PPEQLPIVLQVLLSQ HR RALVLL RFLD+GPWAV L+
Sbjct: 529 FFEQNLTAFELWLKYASNVRHPPEQLPIVLQVLLSQVHRIRALVLLSRFLDLGPWAVYLS 588
Query: 494 LSVGIFPYVLKLLQTTTPELRQILVFIWTKILALD-KSCQVDLVKDGGHAYFIRFL 548
LS+GIFPYVLKLLQ+ PEL+ ILVFIW +I+++D K+ Q +L+K+ G+ YF+ L
Sbjct: 589 LSIGIFPYVLKLLQSPAPELKPILVFIWARIMSIDYKNTQSELIKEKGYMYFVTVL 644
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 169/332 (50%), Gaps = 34/332 (10%)
Query: 1042 FSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGN 1101
F ++ AD+ I ++++E+ L+ F N ++ L L+NE D +LLL S +G
Sbjct: 1220 FEDQLITADDRSTITVFDWEKGKTLSKFSNGTPFGTKVTDLKLINEDDSALLLTGSSDGV 1279
Query: 1102 IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLE 1161
I+I++DY D K+V+A+ + R + ++ +W Q G L +G+V I +WD
Sbjct: 1280 IKIYRDYQDVDTFKIVSAWRGLTDMLLTPRSTGLLTEWLQIRGSLLTTGDVKVIRVWDAH 1339
Query: 1162 KEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTP--DMLVCSTRP-H 1218
E V+ IP+ + I++LTA Q+ G AGF DGS+R+YD R D ++ R +
Sbjct: 1340 TETVEVD-IPAKTSSLITSLTADQLAGNIFVAGFADGSLRVYDRRLDPRDSMIRRWRAGN 1398
Query: 1219 TQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGS--------- 1269
+Q + + Q G ++VS + G ++ DIR+ +D + S
Sbjct: 1399 DKQGVWINNVHLQRG-GYRELVSGATNGVVELWDIRSEDPVESFVDQNVTSQYGSQQKPT 1457
Query: 1270 -LSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGS---------- 1318
++ + VH HAPIIA+G+ + IK+++ G+ L + + H + + + +
Sbjct: 1458 TMTCMQVHEHAPIIATGTKQ--IKIWTTSGDLLNSFKNSHNNGVTSTLAATGIPKSLSYS 1515
Query: 1319 ------VNCLTFHPYQVLLAA-GSADACVSIH 1343
++ + FHP+++++AA S D+ V+I+
Sbjct: 1516 STSDAFLSSMAFHPHRMMIAATNSHDSIVNIY 1547
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 547 FLDSMEAYPEQRAMAAFVLAVIVDGHRRGQEACIEAGLIHVCLKHLQGSMPNDAQTEPLF 606
F S + EQ+AMA FVLA V GQ+ C L++ ++ D PL
Sbjct: 702 FYHSNDTTDEQKAMAVFVLASFVRNFPLGQKNCFSLELVNKLCFYI------DNSEIPLL 755
Query: 607 LQWLCLCLGKLWEDFTEAQTIGRRADAPAIYVPLLSEPQPEVRASAVFSLGTLLDIGF 664
QW + LG L+ D + + A I + L +P PEVR +++F+L + GF
Sbjct: 756 RQWCVILLGLLFADNPLNRFVCMNTGAVEILLKSLKDPVPEVRTASIFALKHFIS-GF 812
>sp|Q0DJA3|DRB3_ORYSJ Double-stranded RNA-binding protein 3 OS=Oryza sativa subsp.
japonica GN=DRB3 PE=2 SV=1
Length = 437
Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 73/82 (89%), Gaps = 1/82 (1%)
Query: 97 RPKDR-MKTGCVALVLCLNISVDPPDVIKISPCARMECWIDPFSMAPQKALETIGKNLSQ 155
+PK+ MKTGCVALVLCLNISVDPPDVIKISPC R ECWIDPFSMA KALETIGK L
Sbjct: 356 QPKEEAMKTGCVALVLCLNISVDPPDVIKISPCVRKECWIDPFSMAAPKALETIGKTLHS 415
Query: 156 QYERWQPRARYKVQLDPTVDEV 177
QYERWQP+ARYK+QLDPT++EV
Sbjct: 416 QYERWQPKARYKLQLDPTLEEV 437
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 35/309 (11%)
Query: 1035 KTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLL 1094
++ + P S ++ + ++ +++W+ L F H G N LD S+L
Sbjct: 952 RSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGH----TGWVYSVAFN-LDGSMLA 1006
Query: 1095 VASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASG-EVS 1153
S + +R+W D Q F QGH VR D G + ASG +
Sbjct: 1007 TGSGDQTVRLW---DISSSQ----CFYIFQGHTSCVRSVVFSSD-----GAMLASGSDDQ 1054
Query: 1154 SIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVC 1213
++ LWD+ + + + C S + + G LA+G D VRL+D+ + + L
Sbjct: 1055 TVRLWDISSGNCLYT-LQGHTSCVRSVVFSPD--GAMLASGGDDQIVRLWDISSGNCLY- 1110
Query: 1214 STRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSAL 1273
+ + +T V +V F P + + + S ++ DI + K Y T+ H ++A+
Sbjct: 1111 TLQGYTSWVRFLV---FSP--NGVTLANGSSDQIVRLWDISSKKCLY-TLQGHTNWVNAV 1164
Query: 1274 AVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAA 1333
A +ASGS Q ++++ + + I H S+ VN + F+P LA+
Sbjct: 1165 AFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSW-------VNSVVFNPDGSTLAS 1217
Query: 1334 GSADACVSI 1342
GS+D V +
Sbjct: 1218 GSSDQTVRL 1226
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 1144 GYLYASGEVSSIM-LWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRL 1202
G L+A+G+ I+ W+ ++++ +S ++++ SQ G LA+G D +VRL
Sbjct: 876 GKLFATGDSGGIVRFWEAATGKELLTCKGHNS--WVNSVGFSQ-DGKMLASGSDDQTVRL 932
Query: 1203 YDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLT 1262
+D+ + L + + HT +V VV F P + + S S ++ DI + + Y+
Sbjct: 933 WDISSGQCLK-TFKGHTSRVRSVV---FSP--NSLMLASGSSDQTVRLWDISSGECLYI- 985
Query: 1263 IDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCL 1322
H G + ++A + ++A+GS Q ++++ + Q I H S V +
Sbjct: 986 FQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTS-------CVRSV 1038
Query: 1323 TFHPYQVLLAAGSADACVSI 1342
F +LA+GS D V +
Sbjct: 1039 VFSSDGAMLASGSDDQTVRL 1058
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 50/265 (18%)
Query: 1089 DVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYA 1148
D S L S + +R+W+ K + QGH V ++VV + G + A
Sbjct: 1211 DGSTLASGSSDQTVRLWEINSSK-------CLCTFQGHTSWV--NSVVFN---PDGSMLA 1258
Query: 1149 SGEV-SSIMLWDLEKEQ---------QMVNPIPSSSDCSISALTASQVHGGQLAAGFVDG 1198
SG ++ LWD+ + VN + + D G LA+G D
Sbjct: 1259 SGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPD------------GSMLASGSGDQ 1306
Query: 1199 SVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKD 1258
+VRL+++ + L + + HT V V +F P D + S S ++ I + +
Sbjct: 1307 TVRLWEISSSKCL-HTFQGHTSWVSSV---TFSP--DGTMLASGSDDQTVRLWSISSGEC 1360
Query: 1259 AYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLE-GEQLGTIRYHHPSFMAQKIG 1317
Y T H + ++ I+ASGS Q ++++S+ G+ L T++ H+ +G
Sbjct: 1361 LY-TFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHN-----NWVG 1414
Query: 1318 SVNCLTFHPYQVLLAAGSADACVSI 1342
S+ F P LLA+GS D V +
Sbjct: 1415 SI---VFSPDGTLLASGSDDQTVRL 1436
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 1188 GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGD 1247
G LA+G D +VRL+D+ + L + + HT V V +F P D + + S S
Sbjct: 1254 GSMLASGSSDKTVRLWDISSSKCL-HTFQGHTNWVNSV---AFNP--DGSMLASGSGDQT 1307
Query: 1248 IQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRY 1306
++ +I + K + T H +S++ ++ASGS Q ++++S+ GE L T
Sbjct: 1308 VRLWEISSSKCLH-TFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLG 1366
Query: 1307 HHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344
H +GSV F P +LA+GS D V + S
Sbjct: 1367 H-----TNWVGSV---IFSPDGAILASGSGDQTVRLWS 1396
Score = 42.0 bits (97), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 1187 HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAG 1246
H + A F + S+R + ++ + T+ + V+ ++F P D + G
Sbjct: 832 HTVIIGADFTNTSLRCVNFTEANL---AYSVFTKILGSVLTVAFSP--DGKLFATGDSGG 886
Query: 1247 DIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIR 1305
++F + K+ LT H ++++ + ++ASGS Q ++++ + G+ L T +
Sbjct: 887 IVRFWEAATGKE-LLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK 945
Query: 1306 YHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSI 1342
H V + F P ++LA+GS+D V +
Sbjct: 946 GH--------TSRVRSVVFSPNSLMLASGSSDQTVRL 974
>sp|Q55FR9|COPA_DICDI Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3 SV=1
Length = 1221
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/304 (19%), Positives = 130/304 (42%), Gaps = 49/304 (16%)
Query: 1039 LQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASC 1098
P P ++A+ + I +++Y TLL FD H+ P +GI+ + L +
Sbjct: 17 FHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINF-----HMTQPLFVSGGD 71
Query: 1099 NGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLW 1158
+ I++W +Y Q+ +++GHK +R V++ +++ ++ +S + I +W
Sbjct: 72 DYKIKVW-NYKQR------RCLFTLKGHKDYIRS----VEFHREAPWIVSSSDDMVIRIW 120
Query: 1159 DLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPH 1218
+ + + + + + +SAL + + + +D ++R++D+ + + +P+
Sbjct: 121 NWQ-SRTCIAELNGHNHYVMSALFHPK--DDLVVSASLDQTIRIWDISGLKKKMTTVKPY 177
Query: 1219 TQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRH 1278
+ DP ++ DI L+++ H ++ + H
Sbjct: 178 REN-------------DPMRLQDELFGTDIS---------VRLSLEGHDRGVNWASFHPT 215
Query: 1279 APIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADA 1338
P I S S +K++ + + T R H+ +V+C FHP Q L+ + S D
Sbjct: 216 QPYIVSASDDHQVKLWRMNDPIVDTFRGHY--------NNVSCALFHPRQDLIISNSEDK 267
Query: 1339 CVSI 1342
+ +
Sbjct: 268 TIRV 271
>sp|C3XVT5|LIS1_BRAFL Lissencephaly-1 homolog OS=Branchiostoma floridae GN=BRAFLDRAFT_59218
PE=3 SV=1
Length = 406
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 130/310 (41%), Gaps = 72/310 (23%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
L P ++V+A E+ IKIW+YE + H + +S D L+AS
Sbjct: 113 LFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVS-------FDQQGKLLAS 165
Query: 1098 CNGN--IRIW-------------KDYD----------------QKDKQ----KLVTAF-- 1120
C+ + I++W D++ +DK +L T +
Sbjct: 166 CSADMTIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFLISASRDKTIKMWELATGYCV 225
Query: 1121 SSIQGHKPGVRCSNVVVDWQQQSGYLYAS-GEVSSIMLW---------DLEKEQQMVNPI 1170
+ GH+ VR V Q G L AS ++ +W +L + + +V I
Sbjct: 226 KTFTGHREWVRTVRV-----NQDGSLLASCSNDQTVRVWVVANKECKAELREHEHVVECI 280
Query: 1171 ---PSSSDCSISALTASQVHGGQ---LAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVER 1224
P S + +S + ++ G L +G D +++++D+ T + + + H V
Sbjct: 281 AWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDIST-GVCIMTLVGHDNWVR- 338
Query: 1225 VVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIAS 1284
G+ + PG I+SAS I+ D +N K T++AH+ +++ HR AP + +
Sbjct: 339 --GVVWHPG--GKYIISASDDKTIRVWDYKN-KRCQKTLEAHQHFCTSIDFHRSAPYVIT 393
Query: 1285 GSAKQLIKVF 1294
GS Q +KV+
Sbjct: 394 GSVDQTVKVW 403
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 128/312 (41%), Gaps = 74/312 (23%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQQQ 1142
C+ ++ I K +D + + L T + GH V ++ + W+ Q
Sbjct: 168 CSADMTI-KLWDFQGFECLRT----MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQ 222
Query: 1143 SGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVNPI 1170
+GY + + ++ +W +L + + +V I
Sbjct: 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 1171 ---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQV 1222
P SS +IS T S+ G L +G D +++++D+ + M + + H V
Sbjct: 283 SWAPESSYSTISDATGSETKRSGKPGPFLLSGSRDKTIKMWDI-SIGMCLMTLVGHDNWV 341
Query: 1223 ERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPII 1282
G+ F PG I+S + I+ D +N K T++AH +++L H+ AP +
Sbjct: 342 R---GVQFHPG--GKFILSCADDKTIRIWDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYV 395
Query: 1283 ASGSAKQLIKVF 1294
+GS Q +KV+
Sbjct: 396 VTGSVDQTVKVW 407
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVTASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS +IS T S+ G L +G D +++++D+ + M + + H
Sbjct: 281 CISWAPESSYSTISDATGSETKKSGKPGPFLLSGSRDKTIKMWDI-SIGMCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F PG I+S + I+ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVQFHPG--GKFILSCADDKTIRIWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|B3S4I5|LIS1_TRIAD Lissencephaly-1 homolog OS=Trichoplax adhaerens GN=TRIADDRAFT_50647
PE=3 SV=1
Length = 409
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 134/342 (39%), Gaps = 93/342 (27%)
Query: 1012 QRSSVSKLNNPIACWDTRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDN 1071
++ S+S +PI C + P ++V++ E+ +KIW+YE +
Sbjct: 99 EKHSLSGHRSPITC-----------VVFHPVYNVMVSSSEDASMKIWDYESGDFERTLRG 147
Query: 1072 H----------------------------DFP-----------DKGISKLCLVNELDVSL 1092
H DF D +S +C + D
Sbjct: 148 HTDSVQDLAFDSSGKLLASSSADMTVKIWDFQTFECRMTLRGHDHNVSSVCFLPSGD--F 205
Query: 1093 LLVASCNGNIRIWKDYDQKDKQKLVTAFS--SIQGHKPGVRCSNVVVDWQQQSGYLYAS- 1149
LL +S + I++W+ + T + + +GH+ VR V D G L AS
Sbjct: 206 LLSSSRDKTIKMWE---------VATGYCVYNFEGHREWVRRVAVASD-----GSLMASC 251
Query: 1150 GEVSSIMLWDLEKEQ------------QMVNPIPSSSDCSISALTASQVHGGQ-----LA 1192
++ +W L ++ + + P S + I+ + ++V GQ LA
Sbjct: 252 SNDQTVRIWSLSSKECKEELRGHEHVVECIKWAPESCNRYINEASGTEVPKGQKSGPFLA 311
Query: 1193 AGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLD 1252
+G D ++++DV T L S H V G++F G + SAS I+ +
Sbjct: 312 SGSRDRVIKIWDVTTAVCLF-SLVGHDNWVR---GLAFHAG--GKYLTSASDDKTIKIWE 365
Query: 1253 IRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVF 1294
+R HK +++AH ++ + HR +P + +GS IKV+
Sbjct: 366 LR-HKRCSKSLEAHNHFVTTIDFHRSSPFVITGSVDLTIKVW 406
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 42/200 (21%)
Query: 1176 CSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLD 1235
CS+S++ + G +A G D V L+ V P+ ++ T HT VE V F +
Sbjct: 21 CSVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLTG-HTTPVESV---RFNNSEE 76
Query: 1236 PAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKV-- 1293
IV+ SQ+G ++ D+ K T+ H+ ++S+L H + +ASGS IK+
Sbjct: 77 --LIVAGSQSGSLRIWDLEAAK-ILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWD 133
Query: 1294 ---------------------FSLEGEQLGTIRYHHP------------SFMAQKIGSVN 1320
FS +G+ L + H + +++ G VN
Sbjct: 134 VRRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVN 193
Query: 1321 CLTFHPYQVLLAAGSADACV 1340
+ FHP + LLA+GSAD V
Sbjct: 194 IIEFHPNEYLLASGSADRTV 213
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 1122 SIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISAL 1181
S+ GH V V + + A + S+ +WDLE + + + ++ +S+L
Sbjct: 58 SLTGHTTPVES----VRFNNSEELIVAGSQSGSLRIWDLEAAKILRTLMGHKAN--VSSL 111
Query: 1182 TASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVS 1241
+G +A+G +D +++L+DVR V + HTQ V + F P D + S
Sbjct: 112 DF-HPYGEFVASGSLDTNIKLWDVRRKG-CVFRYKGHTQAVR---CLRFSP--DGKWLAS 164
Query: 1242 ASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQL 1301
AS ++ D+ K + H+G ++ + H + ++ASGSA + ++ + LE QL
Sbjct: 165 ASDDHSVKLWDLTAGK-MMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQL 223
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 1045 IVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDV----SLLLVASCNG 1100
++VA ++ ++IW+ E +L + H V+ LD + S +
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHK---------ANVSSLDFHPYGEFVASGSLDT 127
Query: 1101 NIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDL 1160
NI++W D ++ F +GH VRC D + +L ++ + S+ LWDL
Sbjct: 128 NIKLW------DVRRKGCVF-RYKGHTQAVRCLRFSPDGK----WLASASDDHSVKLWDL 176
Query: 1161 EKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCS 1214
+ M +I ++ LA+G D +VR +D+ ++ C+
Sbjct: 177 TAGKMMAELSEHKGPVNIIEFHPNEY---LLASGSADRTVRFWDLEKFQLVGCT 227
Score = 35.4 bits (80), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 1255 NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQ 1314
N + +++ H + ++ + +I +GS ++++ LE ++ +R + M
Sbjct: 51 NKPNCIMSLTGHTTPVESVRFNNSEELIVAGSQSGSLRIWDLEAAKI--LR----TLMGH 104
Query: 1315 KIGSVNCLTFHPYQVLLAAGSADACVSI 1342
K +V+ L FHPY +A+GS D + +
Sbjct: 105 K-ANVSSLDFHPYGEFVASGSLDTNIKL 131
>sp|Q9GL51|LIS1_PIG Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus
scrofa GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q8H0T9|KTNB1_ARATH Katanin p80 WD40 repeat-containing subunit B1 homolog OS=Arabidopsis
thaliana GN=At5g23430 PE=2 SV=3
Length = 837
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 20/215 (9%)
Query: 1126 HKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQ 1185
H V C + ++ S L GE + LW + K +++ SS AS+
Sbjct: 15 HSAAVNCLKI---GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASE 71
Query: 1186 VHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQA 1245
V +AAG G+++L+D+ ++ R T + + F P + S S
Sbjct: 72 V---LVAAGAASGTIKLWDLEEAKIV----RTLTGHRSNCISVDFHPFGE--FFASGSLD 122
Query: 1246 GDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIR 1305
+++ DIR K T H ++ L + SG ++KV+ L +L T
Sbjct: 123 TNLKIWDIR-KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Query: 1306 YHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACV 1340
H G + L FHP++ LLA GSAD V
Sbjct: 182 KSHE-------GQIQSLDFHPHEFLLATGSADRTV 209
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 27/212 (12%)
Query: 1118 TAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVS-SIMLWDLEKEQQMVNPIPSSSDC 1176
A S+ GH G+ +V D S L A+G S +I LWDLE+ + + S+C
Sbjct: 50 NAILSLYGHSSGI--DSVTFD---ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNC 104
Query: 1177 SISALTASQVH--GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGL 1234
+ H G A+G +D +++++D+R + + + HT+ V + F P
Sbjct: 105 -----ISVDFHPFGEFFASGSLDTNLKIWDIRKKG-CIHTYKGHTRGVNV---LRFTP-- 153
Query: 1235 DPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVF 1294
D +VS + ++ D+ K +H G + +L H H ++A+GSA + +K +
Sbjct: 154 DGRWVVSGGEDNIVKVWDLTAGK-LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Query: 1295 SLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHP 1326
LE +L I P + V CL+F+P
Sbjct: 213 DLETFEL--IGSGGP-----ETAGVRCLSFNP 237
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 1258 DAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIG 1317
+A L++ H + ++ ++A+G+A IK++ LE ++ H S
Sbjct: 50 NAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRS------- 102
Query: 1318 SVNCLT--FHPYQVLLAAGSADACVSI 1342
NC++ FHP+ A+GS D + I
Sbjct: 103 --NCISVDFHPFGEFFASGSLDTNLKI 127
>sp|P53621|COPA_HUMAN Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2
Length = 1224
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 138/325 (42%), Gaps = 62/325 (19%)
Query: 1028 TRFEKGTKTALLQ-----PFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKL 1082
T+FE TK+A ++ P P ++ + N I++W+Y TL++ FD HD P +GI
Sbjct: 3 TKFE--TKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGID-- 58
Query: 1083 CLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQ 1142
L + + I++W KL ++ GH +R + + +
Sbjct: 59 ---FHKQQPLFVSGGDDYKIKVW-------NYKLRRCLFTLLGHLDYIRTTF----FHHE 104
Query: 1143 SGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRL 1202
++ ++ + +I +W+ + S + LT + + A F
Sbjct: 105 YPWILSASDDQTIRVWNWQ------------SRTCVCVLTGHNHY--VMCAQFHP----- 145
Query: 1203 YDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL- 1261
T D++V ++ T +V + G+ + L P + S + I +D+ DA +
Sbjct: 146 ----TEDLVVSASLDQTVRVWDISGLR-KKNLSPGAVESDVRG--ITGVDLFGTTDAVVK 198
Query: 1262 -TIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL---EGEQLGTIRYHHPSFMAQKIG 1317
++ H ++ A H P+I SG+ + +K++ + + ++ T R H+
Sbjct: 199 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY--------N 250
Query: 1318 SVNCLTFHPYQVLLAAGSADACVSI 1342
+V+C FHP Q L+ + S D + +
Sbjct: 251 NVSCAVFHPRQELILSNSEDKSIRV 275
>sp|P43033|LIS1_BOVIN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Bos
taurus GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|P63004|LIS1_RAT Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus
norvegicus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|P63005|LIS1_MOUSE Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus
musculus GN=Pafah1b1 PE=1 SV=2
Length = 410
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|B0LSW3|LIS1_FELCA Platelet-activating factor acetylhydrolase IB subunit alpha OS=Felis
catus GN=PAFAH1B1 PE=2 SV=1
Length = 410
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q96WV5|COPA_SCHPO Putative coatomer subunit alpha OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBPJ4664.04 PE=1 SV=1
Length = 1207
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 134/323 (41%), Gaps = 53/323 (16%)
Query: 1028 TRFEKGT---KTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCL 1084
T+FE + K P P ++ + N RI++W+Y TLL+ FD HD P +GI+
Sbjct: 5 TKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAF--- 61
Query: 1085 VNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSG 1144
L + + + +W + K ++ L S+ GH VR V + +
Sbjct: 62 --HPTQPLFVSGGDDYKVNVW---NYKSRKLLF----SLCGHMDYVR----VCTFHHEYP 108
Query: 1145 YLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYD 1204
++ + + +I +W+ + + S +A S+ + + +D +VR++D
Sbjct: 109 WILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSE---DLIVSASLDQTVRVWD 165
Query: 1205 VRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL--T 1262
+ M + V +S + L +QA + D+ DA +
Sbjct: 166 ISGLRMKNAAP----------VSMSLEDQL--------AQAHNSISNDLFGSTDAIVKFV 207
Query: 1263 IDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGE---QLGTIRYHHPSFMAQKIGSV 1319
++ H ++ A H P+I S +L+K++ + ++ T R H +V
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGH--------FNNV 259
Query: 1320 NCLTFHPYQVLLAAGSADACVSI 1342
+C FHP+Q L+ + S D + +
Sbjct: 260 SCCLFHPHQELILSASEDKTIRV 282
>sp|P43034|LIS1_HUMAN Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo
sapiens GN=PAFAH1B1 PE=1 SV=2
Length = 410
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q8CIE6|COPA_MOUSE Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=2
Length = 1224
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 62/325 (19%)
Query: 1028 TRFEKGTKTALLQ-----PFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKL 1082
T+FE TK+A ++ P P ++ + N I++W+Y TL++ FD HD P +GI
Sbjct: 3 TKFE--TKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGID-- 58
Query: 1083 CLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQ 1142
L + + I++W KL ++ GH +R + + +
Sbjct: 59 ---FHKQQPLFVSGGDDYKIKVW-------NYKLRRCLFTLLGHLDYIRTTF----FHHE 104
Query: 1143 SGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRL 1202
++ ++ + +I +W+ + S + LT + + A F
Sbjct: 105 YPWILSASDDQTIRVWNWQ------------SRTCVCVLTGHNHY--VMCAQFHP----- 145
Query: 1203 YDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL- 1261
+ D++V ++ T +V + G+ + L P + S + I +D+ DA +
Sbjct: 146 ----SEDLVVSASLDQTVRVWDISGLR-KKNLSPGAVESDVRG--ITGVDLFGTTDAVVK 198
Query: 1262 -TIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL---EGEQLGTIRYHHPSFMAQKIG 1317
++ H ++ A H P+I SG+ + +K++ + + ++ T R H+
Sbjct: 199 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY--------N 250
Query: 1318 SVNCLTFHPYQVLLAAGSADACVSI 1342
+V+C FHP Q L+ + S D + +
Sbjct: 251 NVSCAVFHPRQELILSNSEDKSIRV 275
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca
fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+ S
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLTS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWE 220
Query: 1141 QQSGY----------------------LYAS-GEVSSIMLW---------DLEKEQQMVN 1168
Q+GY L AS ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q27954|COPA_BOVIN Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1
Length = 1224
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 62/325 (19%)
Query: 1028 TRFEKGTKTALLQ-----PFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKL 1082
T+FE TK+A ++ P P ++ + N I++W+Y TL++ FD HD P +GI
Sbjct: 3 TKFE--TKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGID-- 58
Query: 1083 CLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQ 1142
L + + I++W KL ++ GH +R + + +
Sbjct: 59 ---FHKQQPLFVSGGDDYKIKVW-------NYKLRRCLFTLLGHLDYIRTTF----FHHE 104
Query: 1143 SGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRL 1202
++ ++ + +I +W+ + S + LT + + A F
Sbjct: 105 YPWILSASDDQTIRVWNWQ------------SRTCVCVLTGHNHY--VMCAQFHP----- 145
Query: 1203 YDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL- 1261
+ D++V ++ T +V + G+ + L P + S + I +D+ DA +
Sbjct: 146 ----SEDLVVSASLDQTVRVWDISGLR-KKNLSPGAVESDVRG--ITGVDLFGTTDAVVK 198
Query: 1262 -TIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL---EGEQLGTIRYHHPSFMAQKIG 1317
++ H ++ A H P+I SG+ + +K++ + + ++ T R H+
Sbjct: 199 HVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAWEVDTCRGHY--------N 250
Query: 1318 SVNCLTFHPYQVLLAAGSADACVSI 1342
+V+C FHP Q L+ + S D + +
Sbjct: 251 NVSCAVFHPRQELILSNSEDKSIRV 275
>sp|Q9PTR5|LIS1_CHICK Lissencephaly-1 homolog OS=Gallus gallus GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D + L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHTGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS +IS T S+ G L +G D +++++D+ T M + + H
Sbjct: 281 CISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDFKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q5REG7|LIS1_PONAB Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pongo
abelii GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 125/314 (39%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + I D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSIQDIP-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY-----------------------LYASGEVSSIMLW---------DLEKEQQMVN 1168
Q+GY + + ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +GS Q +KV+
Sbjct: 394 YVVTGSVDQTVKVW 407
>sp|Q9CAA0|COB21_ARATH Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2
SV=2
Length = 920
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 1035 KTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLL 1094
K+ L P P ++A+ + + IWNY+ T++ SFD + P + + ++
Sbjct: 19 KSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIA-----RKQWVV 73
Query: 1095 VASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSS 1154
+ + IR++ +Y+ DK K+ A H +RC V Y+ +S +
Sbjct: 74 AGADDMFIRVY-NYNTMDKIKVFEA------HADYIRCVAV----HPTLPYVLSSSDDML 122
Query: 1155 IMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCS 1214
I LWD EK + I + +T + A+ +D +++++++ +PD
Sbjct: 123 IKLWDWEK-GWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPD----P 177
Query: 1215 TRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALA 1274
++ V + + G D +++ S + D + K T++ H ++SA++
Sbjct: 178 NFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQT-KSCVQTLEGHTHNVSAVS 236
Query: 1275 VHRHAPIIASGSAKQLIKVF 1294
H PII +GS ++++
Sbjct: 237 FHPELPIIITGSEDGTVRIW 256
>sp|Q5IS43|LIS1_PANTR Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan
troglodytes GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 126/314 (40%), Gaps = 78/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D S L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDHSGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVD---------------WQ 1140
C+ + I++W D Q ++ GH V ++ + W+
Sbjct: 168 CSADMTIKLW------DFQGF-ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 1141 QQSGY----------------------LYAS-GEVSSIMLW---------DLEKEQQMVN 1168
Q+GY L AS ++ +W +L + + +V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 1169 PI---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
I P SS SIS T S+ G L +G D +++++DV T M + + H
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG-MCLMTLVGHDN 339
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G+ F G I+S + ++ D +N K T++AH +++L H+ AP
Sbjct: 340 WVR---GVLFHSG--GKFILSCADDKTLRVWDYKN-KRCMKTLNAHEHFVTSLDFHKTAP 393
Query: 1281 IIASGSAKQLIKVF 1294
+ +G Q +KV+
Sbjct: 394 YVVTGFVDQTVKVW 407
>sp|Q4RJN5|LIS1_TETNG Lissencephaly-1 homolog OS=Tetraodon nigroviridis GN=pafah1b1 PE=3
SV=1
Length = 410
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 130/312 (41%), Gaps = 74/312 (23%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D++ L+AS
Sbjct: 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDIS-------FDLTGKLLAS 167
Query: 1098 CNGN--IRIW-------------KDYD----------------QKDKQ----KLVTAF-- 1120
C+ + I++W D++ +DK ++ T +
Sbjct: 168 CSADMTIKLWDFQSFECIRTMHGHDHNVSSVAIMPNGDHIISASRDKTMKMWEVATGYCV 227
Query: 1121 SSIQGHKPGVRCSNVVVDWQQQSGYLYAS-GEVSSIMLW---------DLEKEQQMVNPI 1170
+ GH+ VR Q G L AS ++ +W +L + + +V I
Sbjct: 228 KTFTGHREWVRMVR-----PNQDGTLIASCSNDQTVRVWVVASKECKAELREHEHVVECI 282
Query: 1171 ---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQV 1222
P S+ +I T+S+ G L +G D +++++DV T M + + H V
Sbjct: 283 SWAPESAHPTILDATSSESKKSGKPGPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWV 341
Query: 1223 ERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPII 1282
G+ F PG IV+ + ++ D +N K T+ AH +++L H+ AP +
Sbjct: 342 R---GVLFHPG--GKFIVTCADDKTLRIWDYKN-KRCMKTLCAHEHFVTSLDFHKAAPYV 395
Query: 1283 ASGSAKQLIKVF 1294
+GS Q +KV+
Sbjct: 396 VTGSVDQTVKVW 407
>sp|Q803D2|LIS1B_DANRE Lissencephaly-1 homolog B OS=Danio rerio GN=pafah1b1b PE=2 SV=3
Length = 410
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 74/312 (23%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ IK+W+YE + H + IS D + L+AS
Sbjct: 115 IFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDIS-------FDQTGKLLAS 167
Query: 1098 CNGN--IRIW-------------KDYD----------------QKDKQ----KLVTAF-- 1120
C+ + I++W D++ +DK ++ T +
Sbjct: 168 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCV 227
Query: 1121 SSIQGHKPGVRCSNVVVDWQQQSGYLYAS-GEVSSIMLW---------DLEKEQQMVNPI 1170
+ GH+ VR Q G L AS ++ +W +L + + +V I
Sbjct: 228 KTFTGHREWVRMVR-----PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECI 282
Query: 1171 ---PSSSDCSISALTASQVH-----GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQV 1222
P S+ +IS T S+ G L +G D +++++D+ T M + + H V
Sbjct: 283 SWAPESAHPTISEATGSENKKSGKPGPFLLSGSRDKTIKMWDIST-GMCLMTLVGHDNWV 341
Query: 1223 ERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPII 1282
G+ F PG +VS + ++ D +N K T+ AH +++L H+ +P +
Sbjct: 342 R---GVLFHPG--GRFVVSCADDKTLRIWDYKN-KRCMKTLSAHEHFVTSLDFHKASPYV 395
Query: 1283 ASGSAKQLIKVF 1294
+GS Q +KV+
Sbjct: 396 VTGSVDQTVKVW 407
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 19/194 (9%)
Query: 1146 LYASGEVSSIMLWDLEKEQQMVNPIPSSSD-CSISALTASQVHGGQLAAGFVDGSVRLYD 1204
+ A + SI +WDLE + + + ++ CS+ +G +A+G +D ++L+D
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDF----HPYGSFVASGSLDTDIKLWD 133
Query: 1205 VRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTID 1264
VR + + HTQ V + F P D + SA+ ++ D+ K
Sbjct: 134 VRRKGCIF-KYKSHTQAVR---CLRFSP--DGKWLASAADDHTVKLWDLTAGK-VMFEFT 186
Query: 1265 AHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTF 1324
H G ++ + H ++ASGS+ + I+ + LE ++H S + ++ V C+ F
Sbjct: 187 GHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLE-------KFHVVSCIEEEATPVRCILF 239
Query: 1325 HPYQVLLAAGSADA 1338
+P L G D+
Sbjct: 240 NPDGCCLYGGFQDS 253
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 83/199 (41%), Gaps = 42/199 (21%)
Query: 1177 SISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDP 1236
++S+L + G LA G D V ++ V P+ V S HT +E S Q
Sbjct: 22 NVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPN-CVMSLTGHTTPIE-----SLQISAKE 75
Query: 1237 AKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKV--- 1293
IV+ SQ+G I+ D+ K T+ H+ ++ +L H + +ASGS IK+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAK-ILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDV 134
Query: 1294 --------------------FSLEGEQLGTIRYHHP----SFMAQKI--------GSVNC 1321
FS +G+ L + H A K+ G VN
Sbjct: 135 RRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNV 194
Query: 1322 LTFHPYQVLLAAGSADACV 1340
+ FHP + LLA+GS+D +
Sbjct: 195 VEFHPSEYLLASGSSDRTI 213
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 1255 NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQ 1314
N + +++ H + +L + +I +GS I+V+ LE ++ H +
Sbjct: 51 NKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKA---- 106
Query: 1315 KIGSVNCLTFHPYQVLLAAGSADACVSI 1342
++ L FHPY +A+GS D + +
Sbjct: 107 ---NICSLDFHPYGSFVASGSLDTDIKL 131
>sp|O13615|PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp5 PE=1 SV=1
Length = 473
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 1123 IQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALT 1182
I GH VRC VD + + + +I +WDL ++ + ++ L
Sbjct: 159 ISGHLGWVRC----VDVEPGNQWFCTGAGDRTIKIWDLA--SGVLKLTLTGHIATVRGLA 212
Query: 1183 ASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSA 1242
S H + G D V+ +D+ T ++ R + + V + P LD +V+A
Sbjct: 213 VSPRHPYLFSCG-EDKMVKCWDLETNKVI----RHYHGHLSGVYALKLHPTLDV--LVTA 265
Query: 1243 SQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQL 1301
+ + D+R ++ ++ + H+ ++++LAV P + +GS I+++ L G+ L
Sbjct: 266 GRDAVARVWDMRTRQNVHV-LSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTL 324
Query: 1302 GTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSAD 1337
T+ +H +V L+ HP + A+GS+D
Sbjct: 325 TTLTHHKK--------TVRALSLHPDEFTFASGSSD 352
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 1177 SISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDP 1236
++S+L + G LA G D V L+ + P+ ++ T HT VE S +
Sbjct: 22 NVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-HTSPVE-----SVRLNTPE 75
Query: 1237 AKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKV--- 1293
IV+ SQ+G I+ D+ K T+ H+ ++ +L H + +ASGS IK+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 1294 --------------------FSLEGEQLGTIRYHHP----SFMAQKI--------GSVNC 1321
FS +G+ L + H A K+ G VN
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV 194
Query: 1322 LTFHPYQVLLAAGSADACV 1340
+ FHP + LLA+GS+D +
Sbjct: 195 VEFHPNEYLLASGSSDRTI 213
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 1146 LYASGEVSSIMLWDLEKEQQMVNPIPSSSD-CSISALTASQVHGGQLAAGFVDGSVRLYD 1204
+ A + SI +WDLE + + + ++ CS+ +G +A+G D +++L+D
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF----HPYGEFVASGSQDTNIKLWD 133
Query: 1205 VRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTID 1264
+R V R H+Q V + F P D + SA+ ++ D+ K
Sbjct: 134 IRRKG-CVFRYRGHSQAVR---CLRFSP--DGKWLASAADDHTVKLWDLTAGK-MMSEFP 186
Query: 1265 AHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTF 1324
H G ++ + H + ++ASGS+ + I+ + LE Q+ + P G V + F
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP-------GPVRSVLF 239
Query: 1325 HPYQVLLAAGSADA 1338
+P L +G D+
Sbjct: 240 NPDGCCLYSGCQDS 253
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 1045 IVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDV----SLLLVASCNG 1100
++VA ++ I++W+ E +L + H + +C LD + S +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK------ANIC---SLDFHPYGEFVASGSQDT 127
Query: 1101 NIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDL 1160
NI++W D ++ F +GH VRC D + +L ++ + ++ LWDL
Sbjct: 128 NIKLW------DIRRKGCVF-RYRGHSQAVRCLRFSPDGK----WLASAADDHTVKLWDL 176
Query: 1161 EKEQQMVNPIPSSSDCSISALTASQVHGGQ--LAAGFVDGSVRLYDVRTPDMLVC 1213
+M++ P + + + H + LA+G D ++R +D+ ++ C
Sbjct: 177 -TAGKMMSEFPGHT----GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSC 226
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 1255 NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQ 1314
N + +++ H + ++ ++ +I +GS I+V+ LE ++ +R + M
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LR----TLMGH 104
Query: 1315 KIGSVNCLTFHPYQVLLAAGSADACVSI 1342
K ++ L FHPY +A+GS D + +
Sbjct: 105 K-ANICSLDFHPYGEFVASGSQDTNIKL 131
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 42/199 (21%)
Query: 1177 SISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDP 1236
S+S++ + G +A G D V L+ V P+ ++ T HT VE V F +
Sbjct: 22 SVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLTG-HTTPVESV---RFNNAEE- 76
Query: 1237 AKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKV--- 1293
IV+ SQ+G ++ D+ K T+ H+ ++ +L H + +ASGS IK+
Sbjct: 77 -LIVAGSQSGSLRVWDLEAAK-ILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDV 134
Query: 1294 --------------------FSLEGEQLGTIRYHHP------------SFMAQKIGSVNC 1321
FS +G+ L + H + +++ G VN
Sbjct: 135 RRKGCVFRYKGHTQAVRCLRFSPDGKWLASASDDHSVKLWDLTAGKMMAELSEHKGPVNI 194
Query: 1322 LTFHPYQVLLAAGSADACV 1340
+ FHP + LLA+GSAD V
Sbjct: 195 IEFHPNEYLLASGSADRTV 213
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 1122 SIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSD-CSISA 1180
S+ GH V V + + A + S+ +WDLE + + + ++ CS+
Sbjct: 58 SLTGHTTPVES----VRFNNAEELIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDF 113
Query: 1181 LTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIV 1240
+G +A+G +D +++L+DVR V + HTQ V + F P D +
Sbjct: 114 ----HPYGDFVASGSLDTNIKLWDVRR-KGCVFRYKGHTQAVR---CLRFSP--DGKWLA 163
Query: 1241 SASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQ 1300
SAS ++ D+ K + H+G ++ + H + ++ASGSA + ++ + LE Q
Sbjct: 164 SASDDHSVKLWDLTAGK-MMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEKFQ 222
Query: 1301 L 1301
L
Sbjct: 223 L 223
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 27/174 (15%)
Query: 1045 IVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDV----SLLLVASCNG 1100
++VA ++ +++W+ E +L + H + +C LD + S +
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHK------ANVC---SLDFHPYGDFVASGSLDT 127
Query: 1101 NIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDL 1160
NI++W D ++ F +GH VRC D + +L ++ + S+ LWDL
Sbjct: 128 NIKLW------DVRRKGCVF-RYKGHTQAVRCLRFSPDGK----WLASASDDHSVKLWDL 176
Query: 1161 EKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCS 1214
+ M +I ++ LA+G D +VR +D+ ++ C+
Sbjct: 177 TAGKMMAELSEHKGPVNIIEFHPNEY---LLASGSADRTVRFWDLEKFQLIGCT 227
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 42/199 (21%)
Query: 1177 SISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDP 1236
++S+L + G LA G D V L+ + P+ ++ T HT VE S +
Sbjct: 22 NVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTG-HTSPVE-----SVRLNTPE 75
Query: 1237 AKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKV--- 1293
IV+ SQ+G I+ D+ K T+ H+ ++ +L H + +ASGS IK+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAK-ILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDI 134
Query: 1294 --------------------FSLEGEQLGTIRYHHP----SFMAQKI--------GSVNC 1321
FS +G+ L + H A K+ G VN
Sbjct: 135 RRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNV 194
Query: 1322 LTFHPYQVLLAAGSADACV 1340
+ FHP + LLA+GS+D +
Sbjct: 195 VEFHPNEYLLASGSSDRTI 213
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 1146 LYASGEVSSIMLWDLEKEQQMVNPIPSSSD-CSISALTASQVHGGQLAAGFVDGSVRLYD 1204
+ A + SI +WDLE + + + ++ CS+ +G +A+G D +++L+D
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDF----HPYGEFVASGSQDTNIKLWD 133
Query: 1205 VRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTID 1264
+R V R H+Q V + F P D + SA+ ++ D+ K
Sbjct: 134 IRRKG-CVFRYRGHSQAVR---CLRFSP--DGKWLASAADDHTVKLWDLTAGK-MMSEFP 186
Query: 1265 AHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTF 1324
H G ++ + H + ++ASGS+ + I+ + LE Q+ + P G V + F
Sbjct: 187 GHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEP-------GPVRSVLF 239
Query: 1325 HPYQVLLAAGSADA 1338
+P L +G D+
Sbjct: 240 NPDGCCLYSGCQDS 253
Score = 37.4 bits (85), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 1045 IVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDV----SLLLVASCNG 1100
++VA ++ I++W+ E +L + H + +C LD + S +
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHK------ANIC---SLDFHPYGEFVASGSQDT 127
Query: 1101 NIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDL 1160
NI++W D ++ F +GH VRC D + +L ++ + ++ LWDL
Sbjct: 128 NIKLW------DIRRKGCVF-RYRGHSQAVRCLRFSPDGK----WLASAADDHTVKLWDL 176
Query: 1161 EKEQQMVNPIPSSSDCSISALTASQVHGGQ--LAAGFVDGSVRLYDVRTPDMLVC 1213
+M++ P + + + H + LA+G D ++R +D+ ++ C
Sbjct: 177 -TAGKMMSEFPGHT----GPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSC 226
Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 1255 NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQ 1314
N + +++ H + ++ ++ +I +GS I+V+ LE ++ +R + M
Sbjct: 51 NKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKI--LR----TLMGH 104
Query: 1315 KIGSVNCLTFHPYQVLLAAGSADACVSI 1342
K ++ L FHPY +A+GS D + +
Sbjct: 105 K-ANICSLDFHPYGEFVASGSQDTNIKL 131
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 1188 GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLD----PAKIVSAS 1243
G LA G D +VRL+++ D + T V ++ P LD P + S+S
Sbjct: 376 GVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP-LDVNGYPTFLASSS 434
Query: 1244 QAGDIQFLDIR---NHKD----AYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVF-S 1295
Q ++ ++ N D A TI AH ++A+ V + IIAS S + IK++ S
Sbjct: 435 QDRTLKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDS 494
Query: 1296 LEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSI 1342
GE +G +R H A C +F+P+ LA+GS D + I
Sbjct: 495 STGEVVGVLRGHRRGVWA-------C-SFNPFSRQLASGSGDRTIRI 533
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 28/193 (14%)
Query: 1151 EVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDM 1210
+ S+ +W ++ + VN I S D I A +ASQ D +++L+D T ++
Sbjct: 452 DFSNRAVWTIKAHDRDVNAIQVSKDGRIIA-SASQ-----------DKTIKLWDSSTGEV 499
Query: 1211 LVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSL 1270
V R H + V SF P ++ S S I+ ++ + + T++ H G++
Sbjct: 500 -VGVLRGHRRGVW---ACSFNPF--SRQLASGSGDRTIRIWNV-DTQQCVQTLEGHTGAI 552
Query: 1271 SALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQV 1329
L + S +A L+KV+SL GE + T+ H A L
Sbjct: 553 LKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWA--------LASRFDGS 604
Query: 1330 LLAAGSADACVSI 1342
LL +G ADA VS+
Sbjct: 605 LLVSGGADAVVSV 617
Score = 34.3 bits (77), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 1190 QLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQ 1249
QLA+G D ++R+++V T V + HT + +++ IS ++VSA+ G ++
Sbjct: 521 QLASGSGDRTIRIWNVDTQ-QCVQTLEGHTGAILKLIYIS-----QGTQVVSAAADGLVK 574
Query: 1250 FLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVF 1294
+ + + T+D H + ALA ++ SG A ++ V+
Sbjct: 575 VWSLSS-GECVATLDNHEDRVWALASRFDGSLLVSGGADAVVSVW 618
>sp|Q54R82|MKKA_DICDI Mitogen-activated protein kinase kinase kinase A OS=Dictyostelium
discoideum GN=mkkA PE=1 SV=2
Length = 942
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 1118 TAFSSIQGHKPGVRCSNVVVDWQQQSGY--LYASGEVSSIM-LWDLEKEQQMVNPIPSSS 1174
+ S+++GH G+ C +GY L S V +WD ++ + +
Sbjct: 772 SCLSTLRGHTGGIYCVKTDQVATHGNGYNHLVVSASVDKTSNVWDTRSSSKVRSFTQHTE 831
Query: 1175 DCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGL 1234
D + V ++ G DG+++L+D+ T + T+Q V + F
Sbjct: 832 D-----VLCCYVFDQKVVTGSCDGTIKLWDIGTGKTISTFIPSETRQKNYVWTVQF---- 882
Query: 1235 DPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVF 1294
D +KI+S+ + G I+ DI N +D+ +I H ++ +L + I +GS +L+K++
Sbjct: 883 DQSKIISSGKTGIIRIWDIYNERDSR-SIGGHHETIFSLQFNNQKLI--TGSLDKLVKIW 939
Query: 1295 SLE 1297
S++
Sbjct: 940 SID 942
>sp|Q5A7Q3|PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=PRP46 PE=3 SV=1
Length = 389
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 1077 KGISKLCLVNELDVSLLLVASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVV 1136
+G + ++E+ + S + I+IW D++ + ++T GH G+R +
Sbjct: 85 QGWIRAIALDEITNKWYVTGSADSTIKIW-DFENNSLKAVLT------GHVLGIRSLCI- 136
Query: 1137 VDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHG--GQLAAG 1194
++ YL++ GE S+ WDLE+ S + + + +H L +G
Sbjct: 137 ---SKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFSG 193
Query: 1195 FVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIR 1254
D VR++D+R+ + + HT + S + + +++++S G I+ D+R
Sbjct: 194 GKDCVVRVWDIRSR-VEAMTLLGHTNDI-----TSIETDYNDPQVITSSMDGTIRLWDLR 247
Query: 1255 NHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGE---QLGTIRYHHPS 1310
K L I H S+ ++ H SG + IK + L +GE + GT +
Sbjct: 248 KSKTELL-ITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLLPKGELLNEFGTSQLSPNQ 306
Query: 1311 FMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344
+I +N L +P L +G D + ++
Sbjct: 307 RDNSRI--INTLAINPVTNTLFSGYDDGKLEFYN 338
Score = 36.2 bits (82), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 87/213 (40%), Gaps = 20/213 (9%)
Query: 1037 ALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVA 1096
AL + + V + IKIW++E ++L H GI LC+ L
Sbjct: 92 ALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVL---GIRSLCISKRH--PYLFSG 146
Query: 1097 SCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIM 1156
+ ++R W ++ S GH GV + + L++ G+ +
Sbjct: 147 GEDKSLRCWD--LERSNSDAGCQIRSYHGHLGGVYS----IGLHPELDVLFSGGKDCVVR 200
Query: 1157 LWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTR 1216
+WD+ + + + ++D I+++ + + Q+ +DG++RL+D+R + T
Sbjct: 201 VWDIRSRVEAMTLLGHTND--ITSI-ETDYNDPQVITSSMDGTIRLWDLRKSKTELLITN 257
Query: 1217 PHTQQVERVVGISFQPGLDPAKIVSASQAGDIQ 1249
H++ + S + A VS G+I+
Sbjct: 258 -HSKSIR-----SMKSHPKEATFVSGDSNGEIK 284
>sp|O42937|COPB2_SCHPO Probable coatomer subunit beta' OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sec27 PE=3 SV=2
Length = 796
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 22/260 (8%)
Query: 1035 KTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLL 1094
K P P V+A+ N ++ IWNY TL+ SFD +D P + + + N +
Sbjct: 18 KAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACAFIARKN-----WFV 72
Query: 1095 VASCNGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSS 1154
S + +R++ +Y+ +K VT F + H +R +VV Q +L S + +
Sbjct: 73 CGSDDFQVRVY-NYNTGEK---VTQF---EAHPDYIRA--LVVHPTQP--FLLTSSDDMT 121
Query: 1155 IMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCS 1214
I ++ + + V S +S L + A+ +DG+V+++ + + +
Sbjct: 122 IKCFNWDMSWKCVQTFEGHSRYVMS-LAINPKDTNTFASSCLDGTVKVWSFGSS-VANFT 179
Query: 1215 TRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALA 1274
+ H + V V ++ P D +++A I+ D + K ++ H ++S
Sbjct: 180 LQAHDRGVNYV---NYYPAGDKPYLITAGDDNLIKVWDYQT-KACVRILEGHTNNVSFAF 235
Query: 1275 VHRHAPIIASGSAKQLIKVF 1294
H PII SGS +K++
Sbjct: 236 FHSKFPIIISGSEDGTVKIW 255
>sp|Q4WEI5|HAT2_ASPFU Histone acetyltransferase type B subunit 2 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=hat2 PE=3 SV=1
Length = 436
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 29/206 (14%)
Query: 1155 IMLWDLEKEQQM----VNP----IPSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVR 1206
+M+WD K + VNP I + + L+ S GQLA G D +VR++D+
Sbjct: 163 VMVWDRSKHPSLPTGQVNPQMELIGHTKEGF--GLSWSPHTAGQLATGSEDKTVRIWDLT 220
Query: 1207 T---PDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNH---KDAY 1260
T + L+ +R +T V + + P L + I + S +Q LDIR + A
Sbjct: 221 TYSKGNKLLKPSRTYTHHSSIVNDVQYHP-LHSSLIGTVSDDITLQILDIRESETTRAAA 279
Query: 1261 LTIDAHRGSLSALAVHRHAP-IIASGSAKQLIKVFSLEG--EQLGTIRYHHPSFMAQKIG 1317
T HR +++A+A + A ++A+GSA + I ++ L +L ++ H
Sbjct: 280 STEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRNLKTKLHSLESH--------TD 331
Query: 1318 SVNCLTFHPY-QVLLAAGSADACVSI 1342
SV +++HP+ + +LA+ S D ++
Sbjct: 332 SVTSISWHPFEEAVLASASYDRKIAF 357
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 18/203 (8%)
Query: 1141 QQSGYLYASG-EVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVHGGQLAAGFVDGS 1199
+ SG L A+G E + +W + K +++ +S +S+ ++ AG + GS
Sbjct: 30 KSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSE---ERVVAGSLSGS 86
Query: 1200 VRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDA 1259
+RL+D+ +L R + + F P + + S S +I+ D+R K
Sbjct: 87 LRLWDLEAAKIL----RTLMGHKASISSLDFHPMGE--YLASGSVDSNIKLWDVR-RKGC 139
Query: 1260 YLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSV 1319
H ++ LA +AS S +K++ L ++ T H S +V
Sbjct: 140 VFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS-------AV 192
Query: 1320 NCLTFHPYQVLLAAGSADACVSI 1342
N + FHP + LLA+GSAD V +
Sbjct: 193 NVVQFHPNEYLLASGSADRTVKL 215
>sp|D3TLL6|LIS1_GLOMM Lissencephaly-1 homolog OS=Glossina morsitans morsitans PE=2 SV=1
Length = 411
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 124/313 (39%), Gaps = 75/313 (23%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++++A E+ IKIW++E S H + I+ D L+AS
Sbjct: 115 IFHPTYSLMLSASEDAVIKIWDFETGEYERSLKGHTSSVQDIA-------FDSQGKLLAS 167
Query: 1098 CNGN--IRIWK---------------------------DY------DQKDKQ-KLVTAF- 1120
C+ + I++W DY DQ K ++ T +
Sbjct: 168 CSADLSIKLWDFQQSYDCVKTMLGHDHNVSSVAFVPAGDYVLSASRDQTIKMWEVATGYC 227
Query: 1121 -SSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVS-SIMLW---------DLEKEQQMVNP 1169
+ GH+ +R V +D G ++AS + SI +W +L V
Sbjct: 228 VKTYSGHREWIRMVRVHMD-----GNIFASCSIDHSIRIWSINSRDCKAELRAHDHTVEC 282
Query: 1170 IPSSSDCSISALTAS--------QVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQ 1221
I + D S + + + G LA+G D ++R++DV L T H
Sbjct: 283 IAWAPDISTTHINEAAGSDNKKGHHQGPFLASGSRDKTIRVWDVGVGLCLFVLT-GHDNW 341
Query: 1222 VERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAPI 1281
V ++F PG +VSAS I+ D+RN K T+ AH+ +++ H+ P
Sbjct: 342 VRE---LTFHPG--GKYLVSASDDKTIRVWDLRN-KRFMKTLYAHQHFCTSVDFHKKLPY 395
Query: 1282 IASGSAKQLIKVF 1294
+ SGS +KV+
Sbjct: 396 VISGSVDNTVKVW 408
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 77/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ I+IW++E S H + ++ D L+AS
Sbjct: 115 IFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA-------FDAQGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRC---------------SNVVVDWQ 1140
C+ + I++W D Q+ ++ GH V + W+
Sbjct: 168 CSADLSIKLW------DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Query: 1141 QQSGYLYASG------------EVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQV-- 1186
+GY + + + +Q + + +S DC +
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVE 281
Query: 1187 --------------------------HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
G LA+G D ++R++DV + + + + H
Sbjct: 282 CIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLTLSGHDN 340
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G++F PG +VSAS I+ D+RN K T+ AH+ +++ H+ P
Sbjct: 341 WVR---GLAFHPG--GKYLVSASDDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAHP 394
Query: 1281 IIASGSAKQLIKVF 1294
+ SGS Q +KV+
Sbjct: 395 YVISGSVDQTVKVW 408
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 77/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ I+IW++E S H + ++ D L+AS
Sbjct: 115 IFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA-------FDAQGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRC---------------SNVVVDWQ 1140
C+ + I++W D Q+ ++ GH V + W+
Sbjct: 168 CSADLSIKLW------DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Query: 1141 QQSGYLYASG------------EVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQV-- 1186
+GY + + + +Q + + +S DC +
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVE 281
Query: 1187 --------------------------HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
G LA+G D ++R++DV + + + + H
Sbjct: 282 CIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLTLSGHDN 340
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G++F PG +VSAS I+ D+RN K T+ AH+ +++ H+ P
Sbjct: 341 WVR---GLAFHPG--GKYLVSASDDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAHP 394
Query: 1281 IIASGSAKQLIKVF 1294
+ SGS Q +KV+
Sbjct: 395 YVISGSVDQTVKVW 408
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1 SV=2
Length = 411
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 116/314 (36%), Gaps = 77/314 (24%)
Query: 1038 LLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVAS 1097
+ P ++V+A E+ I+IW++E S H + ++ D L+AS
Sbjct: 115 IFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA-------FDAQGKLLAS 167
Query: 1098 CNGN--IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRC---------------SNVVVDWQ 1140
C+ + I++W D Q+ ++ GH V + W+
Sbjct: 168 CSADLSIKLW------DFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE 221
Query: 1141 QQSGYLYASG------------EVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQV-- 1186
+GY + + + +Q + + +S DC +
Sbjct: 222 VATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVE 281
Query: 1187 --------------------------HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQ 1220
G LA+G D ++R++DV + + + + H
Sbjct: 282 CIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV-SVGLCLLTLSGHDN 340
Query: 1221 QVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAHRGSLSALAVHRHAP 1280
V G++F PG +VSAS I+ D+RN K T+ AH+ +++ H+ P
Sbjct: 341 WVR---GLAFHPG--GKYLVSASDDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAHP 394
Query: 1281 IIASGSAKQLIKVF 1294
+ SGS Q +KV+
Sbjct: 395 YVISGSVDQTVKVW 408
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 510,972,045
Number of Sequences: 539616
Number of extensions: 21989438
Number of successful extensions: 56827
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 468
Number of HSP's that attempted gapping in prelim test: 55534
Number of HSP's gapped (non-prelim): 1469
length of query: 1344
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1214
effective length of database: 121,419,379
effective search space: 147403126106
effective search space used: 147403126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)