Query 000700
Match_columns 1344
No_of_seqs 913 out of 2448
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 18:01:29 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000700.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_469-473//hhsearch_pdb/000700hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 1.0 1 1 320.4 42.6 285 1028-1344 105-408 (410)
2 3iz6_a 40S ribosomal protein R 1.0 1 1 307.4 36.7 296 1028-1344 63-372 (380)
3 1got_B GT-beta; complex (GTP-b 1.0 1 1 303.4 48.9 286 1028-1344 52-340 (340)
4 4gqb_B Methylosome protein 50; 1.0 1 1 301.3 37.7 286 1030-1344 29-328 (344)
5 4g56_B MGC81050 protein; prote 1.0 1 1 299.2 36.3 288 1029-1344 40-340 (357)
6 2pbi_B Guanine nucleotide-bind 1.0 1 1 298.7 42.4 289 1028-1344 61-354 (354)
7 3ow8_A WD repeat-containing pr 1.0 1 1 297.7 42.6 283 1028-1344 29-318 (321)
8 2ynn_A Coatomer subunit beta'; 1.0 1 1 291.5 43.7 285 1028-1342 10-298 (304)
9 1nr0_A Actin interacting prote 1.0 1 1 290.8 41.3 292 1029-1344 188-608 (611)
10 1nr0_A Actin interacting prote 1.0 1 1 290.4 39.6 290 1029-1344 145-564 (611)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=1.00 E-value=1 Score=320.35 Aligned_cols=285 Identities=19% Similarity=0.349 Sum_probs=256.7
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 67899817999947999999997899499998799937888407999999848999986089989999978980999835
Q 000700 1028 TRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1028 ~~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
..|...|+++.|+|++.+|++|+.||.|+|||+.+++....+.+|. ..|.+++| ++++.+|++|+.||.|++||.
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~---~~V~~v~~--~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT---DSVQDISF--DHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS---SCEEEEEE--CTTSSEEEEEETTSCCCEEET
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCC---CCEEEEEE--CCCCCEEEEEECCCEEEEEEC
T ss_conf 1667768999996999989999389859999899993778881667---86878998--599999999918981999958
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCC
Q ss_conf 57788505986010235789972235037999359996999988981999987789624665349999982699987599
Q 000700 1108 YDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVH 1187 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~Vtsl~~~s~d 1187 (1344)
.. +. .+ +.+.+|...|.+ ++|++++..+++++.|+.|++||++++. ++..+.+|... |.++ .++++
T Consensus 180 ~~--~~--~~---~~~~~h~~~V~~----v~~~p~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~h~~~-v~~~-~~~~~ 245 (410)
T 1vyh_C 180 QG--FE--CI---RTMHGHDHNVSS----VSIMPNGDHIVSASRDKTIKMWEVQTGY-CVKTFTGHREW-VRMV-RPNQD 245 (410)
T ss_dssp TS--SC--EE---ECCCCCSSCEEE----EEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSC-EEEE-EECTT
T ss_pred CC--CC--EE---EEECCCCCCEEE----EEEECCCCEEEEEECCCEEEEEECCCCC-EEEEEECCCCC-EEEE-EECCC
T ss_conf 99--82--66---998289997789----9996799999999689969999899994-89999278862-8999-99899
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCC------------------CCCEEEEEECCCCEE
Q ss_conf 98999997799099998789970268425788787785999992089------------------999999997899299
Q 000700 1188 GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGL------------------DPAKIVSASQAGDIQ 1249 (1344)
Q Consensus 1188 g~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~------------------~g~~Lvsgs~DG~I~ 1249 (1344)
+.++++|+.||.|++||++++. ....+. +|...|.++.|+|+. .+.++++|+.||.|+
T Consensus 246 g~~l~s~s~D~~v~vwd~~~~~-~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 246 GTLIASCSNDQTVRVWVVATKE-CKAELR---EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp SSEEEEEETTSCEEEEETTTCC-EEEEEC---CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEE
T ss_pred CCEEEEECCCCEEEEEECCCCC-EEEEEC---CCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEEEEEECCCEEE
T ss_conf 9999999189909999898974-366733---787458999985865543101212555556678888999993898499
Q ss_pred EEECCCCCCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 99778886315999057998699999079998999967990999967-99268998345786444567873899993699
Q 000700 1250 FLDIRNHKDAYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQ 1328 (1344)
Q Consensus 1250 IWDl~~~~~~i~~l~~h~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~-~g~~l~~l~~~h~~f~~~~~~~V~slafspdg 1328 (1344)
+||++++ .++.++.+|...|++++|+|++.+|++|+.|+.|++||. +++.+..+.. |. ..|++++|+|++
T Consensus 322 iwd~~~~-~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~-h~-------~~v~~l~~~~~~ 392 (410)
T 1vyh_C 322 MWDVSTG-MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HE-------HFVTSLDFHKTA 392 (410)
T ss_dssp EEETTTT-EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC-CS-------SCEEEEEECSSS
T ss_pred EEECCCC-CEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC-CC-------CCEEEEEECCCC
T ss_conf 9988999-66999977888589999949989999995979299998999906899847-77-------868999982899
Q ss_pred CEEEEEECCCEEEECC
Q ss_conf 7899998898099919
Q 000700 1329 VLLAAGSADACVSIHS 1344 (1344)
Q Consensus 1329 ~~Lasgs~Dg~I~IWd 1344 (1344)
.+|++|+.||.|++|+
T Consensus 393 ~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 393 PYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SCEEEEETTSEEEEEC
T ss_pred CEEEEEECCCCEEEEE
T ss_conf 9999992799489973
No 2
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=1.00 E-value=1 Score=307.39 Aligned_cols=296 Identities=15% Similarity=0.235 Sum_probs=245.3
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 67899817999947999999997899499998799937888407999999848999986089989999978980999835
Q 000700 1028 TRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1028 ~~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
..|...|++++|+|++++|++|+.||.|+|||..+++....+..|. ..|.+++| ++++.++++|+.|+.+++|++
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~---~~v~~~~~--s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC---PWVMECAF--APNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC---TTCCCCEE--CTTSSEEEECCSSSCCEEEEC
T ss_pred CCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEECCC---CCEEEEEE--CCCCCEEEEEECCCCEEEEEC
T ss_conf 0453477899996899989999189809998788886014885599---87899999--899998999547985899989
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCC-CEEEEEECCCEEEEEECCCCCEEEEEE-----CCCCCCCEEEE
Q ss_conf 577885059860102357899722350379993599-969999889819999877896246653-----49999982699
Q 000700 1108 YDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQS-GYLYASGEVSSIMLWDLEKEQQMVNPI-----PSSSDCSISAL 1181 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~-~~Llaag~Dg~I~IWDl~s~~~~v~~i-----~~~~~~~Vtsl 1181 (1344)
.............+.+.+|...+.+ +.|.+++ ..+++++.|+.|++||+.++. ++..+ .+|.. .|.++
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~----~~~~~~~~~~l~s~s~D~~i~~wd~~~~~-~~~~~~~~~~~~h~~-~v~~~ 211 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASS----CQYVPDQETRLITGSGDQTCVLWDVTTGQ-RISIFGSEFPSGHTA-DVLSL 211 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCC----CBCCSSSSSCEEEECTTSCEEEECTTTCC-EEEEECCCSSSSCCS-CEEEE
T ss_pred CCCCCCCCCCCCEEECCCCCCCEEE----EEEECCCCCEEEEECCCCCEEEEECCCCC-EEEEEECCCCCCCCC-CEEEE
T ss_conf 7775556773312640689754689----99964899789997799819999867795-789960566788756-76999
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEE
Q ss_conf 98759998999997799099998789970268425788787785999992089999999997899299997788863159
Q 000700 1182 TASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL 1261 (1344)
Q Consensus 1182 ~~~s~dg~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~ 1261 (1344)
.+.+.+++++++|+.||.|++||++........+. +|...|.+++|+|+ +.++++|+.||.|++||++++ ..+.
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~---~h~~~v~~v~~~p~--~~~l~s~s~D~~i~lwd~~~~-~~~~ 285 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH---GHEGDINSVKFFPD--GQRFGTGSDDGTCRLFDMRTG-HQLQ 285 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC---CCSSCCCEEEECTT--SSEEEEECSSSCEEEEETTTT-EEEE
T ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCCCEEEEC---CCCCCEEEEEEECC--CCEEEEECCCCEEEEEECCCC-CEEE
T ss_conf 92069999899997898699997888973469988---74887579999169--996999838996999988899-6889
Q ss_pred EEECCC-------CCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEE
Q ss_conf 990579-------98699999079998999967990999967-9926899834578644456787389999369978999
Q 000700 1262 TIDAHR-------GSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAA 1333 (1344)
Q Consensus 1262 ~l~~h~-------~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~-~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~~Las 1333 (1344)
.+..+. ..+++++|+|++.++++|+.||.|++||. .++.+..+.. . ...|.+.|++++|+|++.+|++
T Consensus 286 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~-~---~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 286 VYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGT-L---QNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECC-S---CSSCCCCCCEEEECSSSSEEEE
T ss_pred EECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-C---CCCCCCCEEEEEECCCCCEEEE
T ss_conf 86156555665568638999889999899997999799998877815789702-3---6777784579998999998999
Q ss_pred EECCCEEEECC
Q ss_conf 98898099919
Q 000700 1334 GSADACVSIHS 1344 (1344)
Q Consensus 1334 gs~Dg~I~IWd 1344 (1344)
|+.|+.|++|+
T Consensus 362 gs~D~~i~iW~ 372 (380)
T 3iz6_a 362 GSWDKNLKIWA 372 (380)
T ss_dssp ECTTSCEEEEE
T ss_pred EECCCCEEEEE
T ss_conf 60899889995
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=1.00 E-value=1 Score=303.43 Aligned_cols=286 Identities=15% Similarity=0.254 Sum_probs=251.7
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 67899817999947999999997899499998799937888407999999848999986089989999978980999835
Q 000700 1028 TRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1028 ~~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
..|...|.+++|+|++++|++|+.||.|++||..+++.+..+..|. ..|.+++| ++++.++++|+.|+.|++|++
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~---~~v~~~~~--s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS---SWVMTCAY--APSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS---SCEEEEEE--CTTSSEEEEEETTCEEEEEET
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCEEEECCC---CCEEEEEE--CCCCCEEEEEECCCEEEEEEC
T ss_conf 4877836899988999999998188968999899987433760388---61889999--999999999808981999979
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCC
Q ss_conf 57788505986010235789972235037999359996999988981999987789624665349999982699987599
Q 000700 1108 YDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQVH 1187 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~Vtsl~~~s~d 1187 (1344)
....+..... ..+.+|...+.+ +.|.++ +.+++++.|+.|++||+.++. ++..+.+|... |.++ .++++
T Consensus 127 ~~~~~~~~~~---~~~~~h~~~v~~----~~~~~~-~~l~s~s~d~~i~~wd~~~~~-~~~~~~~h~~~-v~~~-~~~~~ 195 (340)
T 1got_B 127 KTREGNVRVS---RELAGHTGYLSC----CRFLDD-NQIVTSSGDTTCALWDIETGQ-QTTTFTGHTGD-VMSL-SLAPD 195 (340)
T ss_dssp TTCSBSCEEE---EEEECCSSCEEE----EEEEET-TEEEEEETTSCEEEEETTTTE-EEEEECCCSSC-EEEE-EECTT
T ss_pred CCCCCCCEEE---EEECCCCCCEEE----EEECCC-CCEEEEECCCCEEEEECCCCC-EEEEECCCCCC-EEEE-EECCC
T ss_conf 6688861367---784487763899----998799-969999899929999899991-88997699986-6899-99899
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEC--
Q ss_conf 989999977990999987899702684257887877859999920899999999978992999977888631599905--
Q 000700 1188 GGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDA-- 1265 (1344)
Q Consensus 1188 g~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~~l~~-- 1265 (1344)
+.++++|+.||.|++||++++. ....+. +|...|.+++|+|+ +.++++|+.||.|++||++.. ..+..+..
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~-~~~~~~---~h~~~v~~v~~~p~--~~~l~s~s~d~~v~iwd~~~~-~~~~~~~~~~ 268 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGM-CRQTFT---GHESDINAICFFPN--GNAFATGSDDATCRLFDLRAD-QELMTYSHDN 268 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCS-EEEEEC---CCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTT-EEEEEECCTT
T ss_pred CCEEEEEECCCCEEEEECCCCE-EEEEEC---CCCCCEEEEEECCC--CCEEEEECCCCCEEEEECCCC-CEEEEECCCC
T ss_conf 9999999389939997789981-678974---87687799999499--998999748981999988999-1899972688
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEE-CCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECC
Q ss_conf 799869999907999899996799099996-7992689983457864445678738999936997899998898099919
Q 000700 1266 HRGSLSALAVHRHAPIIASGSAKQLIKVFS-LEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344 (1344)
Q Consensus 1266 h~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd-~~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~~Lasgs~Dg~I~IWd 1344 (1344)
+...|++++|+|++.++++|+.|+.|++|| .+++.+..+.+ |. +.|.+++|+|++.+|++|+.|+.|++|+
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~-h~-------~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG-HD-------NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CS-------SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEEC-CC-------CCEEEEEECCCCCEEEEECCCCCEEECC
T ss_conf 524169999989999999977999099988413838658505-77-------8488999829999899972886189559
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=1.00 E-value=1 Score=301.32 Aligned_cols=286 Identities=17% Similarity=0.227 Sum_probs=233.7
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCC-----------CCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEEC
Q ss_conf 899817999947999999997899499998799-----------937888407999999848999986089989999978
Q 000700 1030 FEKGTKTALLQPFSPIVVAADENERIKIWNYEE-----------DTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASC 1098 (1344)
Q Consensus 1030 ~~~~I~si~fspdg~~Latgs~dg~I~IWd~~t-----------g~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~ 1098 (1344)
+...+.+++|+|||.+|++++ |+++++||... .........+. ..|.+++| +++ +.+++|+.
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~--s~d-~~l~~~s~ 101 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTE---AGVADLTW--VGE-RGILVASD 101 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEES---SCEEEEEE--ETT-TEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEEE-CCCEEEEECEEEEECCCCCCCCCCEEEEEECCC---CCEEEEEE--ECC-CEEEEEEC
T ss_conf 558888999989999999990-895687623056503655567765466660367---98789999--299-82999989
Q ss_pred CCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCE
Q ss_conf 98099983557788505986010235789972235037999359996999988981999987789624665349999982
Q 000700 1099 NGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSI 1178 (1344)
Q Consensus 1099 DG~IrIWdi~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~V 1178 (1344)
||.|++||+.+.+...... ....+|...|.+ ++|++++..+++++.|+.|++||+++++ ++..+.+|.+. |
T Consensus 102 dg~v~lWd~~~~~~~~~~~---~~~~~H~~~V~~----v~~spdg~~l~sgs~d~~i~iwd~~~~~-~~~~~~~h~~~-V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSK---FCKYEHDDIVST----VSVLSSGTQAVSGSKDICIKVWDLAQQV-VLSSYRAHAAQ-V 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEE---EEEECCSSCEEE----EEECTTSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSC-E
T ss_pred CCEEEEEECCCCCCEEEEE---CCCCCCCCCEEE----EEECCCCCEEEEEECCCEEEEEECCCCC-EEEEECCCCCC-E
T ss_conf 7989999653887435860---134678997899----9998998999999498939999999996-99997576885-5
Q ss_pred EEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 6999875999-899999779909999878997026842578878778599999208999999999789929999778886
Q 000700 1179 SALTASQVHG-GQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHK 1257 (1344)
Q Consensus 1179 tsl~~~s~dg-~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~ 1257 (1344)
+++ .+++++ .++++|+.||.|++||+++++ ....+ ....+...+.+++|+|+ ++.++++|+.||.|++||++++
T Consensus 173 ~~~-~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~-~~~~~~~~~~~~~~~p~-~~~~l~sg~~dg~v~~wd~~~~- 247 (344)
T 4gqb_B 173 TCV-AASPHKDSVFLSCSEDNRILLWDTRCPK-PASQI-GCSAPGYLPTSLAWHPQ-QSEVFVFGDENGTVSLVDTKST- 247 (344)
T ss_dssp EEE-EECSSCTTEEEEEETTSCEEEEETTSSS-CEEEC-C----CCCEEEEEECSS-CTTEEEEEETTSEEEEEESCC--
T ss_pred EEE-EECCCCCCCEEEECCCCCCCCCCCCCCC-EEEEE-ECCEEECCCEEEEECCC-CCCCEEEECCCCCEEEEECCCC-
T ss_conf 788-8658999740110344355102344552-00111-01000012123566179-9960588615871898989999-
Q ss_pred CCEEEEECCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC-EEEEEE
Q ss_conf 3159990579986999990799-98999967990999967992689983457864445678738999936997-899998
Q 000700 1258 DAYLTIDAHRGSLSALAVHRHA-PIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQV-LLAAGS 1335 (1344)
Q Consensus 1258 ~~i~~l~~h~~~ItsLa~sp~g-~~LasgS~Dg~I~Iwd~~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~-~Lasgs 1335 (1344)
+++.++.+|...|++++|+|++ .+|++|+.|++|+|||.....+..+.+ |. +.|++++|+|++. +|++++
T Consensus 248 ~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~-H~-------~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 248 SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQA-HR-------DFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp -CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECC-CS-------SCEEEEEECSSSTTEEEEEE
T ss_pred CEEEEECCCCCCEEEEEECCCCCEEEEEEECCCEEEEEECCCCCEEEECC-CC-------CCEEEEEEECCCCEEEEEEC
T ss_conf 59899837889988999926999099999389949999999996999728-89-------97789999179996999993
Q ss_pred CCCEEEECC
Q ss_conf 898099919
Q 000700 1336 ADACVSIHS 1344 (1344)
Q Consensus 1336 ~Dg~I~IWd 1344 (1344)
.|+.|++|+
T Consensus 320 ~D~~v~~w~ 328 (344)
T 4gqb_B 320 WDHQVVHHV 328 (344)
T ss_dssp TTSCEEEEE
T ss_pred CCCEEEEEE
T ss_conf 799599998
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=1.00 E-value=1 Score=299.20 Aligned_cols=288 Identities=17% Similarity=0.221 Sum_probs=237.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEEC------CCCEEEEECCCCCE----EEEEECCCCCCCCEEEEEEEEECCCCEEEEEEC
Q ss_conf 78998179999479999999978------99499998799937----888407999999848999986089989999978
Q 000700 1029 RFEKGTKTALLQPFSPIVVAADE------NERIKIWNYEEDTL----LNSFDNHDFPDKGISKLCLVNELDVSLLLVASC 1098 (1344)
Q Consensus 1029 ~~~~~I~si~fspdg~~Latgs~------dg~I~IWd~~tg~~----i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~ 1098 (1344)
.|...|++++|+|||.+|++|+. |+.|++|+..++.. ......|. ..|++++| ++++ .+++++.
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~---~~V~~~~~--s~d~-~~l~~s~ 113 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE---AGVTDVAW--VSEK-GILVASD 113 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS---SCEEEEEE--ETTT-EEEEEET
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCC---CCEEEEEE--CCCC-CEEEEEC
T ss_conf 2107889999989999999982898713268699978999871405850247887---98799999--6899-8999989
Q ss_pred CCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCE
Q ss_conf 98099983557788505986010235789972235037999359996999988981999987789624665349999982
Q 000700 1099 NGNIRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSI 1178 (1344)
Q Consensus 1099 DG~IrIWdi~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~V 1178 (1344)
||.|++||+.+.+...... ....+|...|.+ ++|++++..+++++.|+.|++||+++++ ++..+..|... |
T Consensus 114 dg~v~lWd~~~~~~~~~~~---~~~~~h~~~V~~----v~~spdg~~l~sgs~dg~v~iwd~~~~~-~~~~~~~h~~~-v 184 (357)
T 4g56_B 114 SGAVELWEILEKESLLVNK---FAKYEHDDIVKT----LSVFSDGTQAVSGGKDFSVKVWDLSQKA-VLKSYNAHSSE-V 184 (357)
T ss_dssp TSCEEEC--------CCCC---EEECCCSSCEEE----EEECSSSSEEEEEETTSCEEEEETTTTE-EEEEECCCSSC-E
T ss_pred CCEEEEEECCCCCEEEEEE---ECCCCCCCCEEE----EEECCCCCEEEEEECCCEEEEEECCCCC-EEEEECCCCCC-E
T ss_conf 9989993445664047874---213788898899----9997998999999698939999899995-99998277897-8
Q ss_pred EEEEEECCCC-CEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 6999875999-899999779909999878997026842578878778599999208999999999789929999778886
Q 000700 1179 SALTASQVHG-GQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHK 1257 (1344)
Q Consensus 1179 tsl~~~s~dg-~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~ 1257 (1344)
+++ .+++++ .++++++.||.|++||+++++ ..... ....+...+.+++|+|+ ++.++++|+.|+.|++||++++
T Consensus 185 ~~v-~~s~~~~~~~~s~~~dg~v~~wd~~~~~-~~~~~-~~~~~~~~v~~v~~sp~-~~~~la~g~~d~~i~~wd~~~~- 259 (357)
T 4g56_B 185 NCV-AACPGKDTIFLSCGEDGRILLWDTRKPK-PATRI-DFCASDTIPTSVTWHPE-KDDTFACGDETGNVSLVNIKNP- 259 (357)
T ss_dssp EEE-EECTTCSSCEEEEETTSCEEECCTTSSS-CBCBC-CCTTCCSCEEEEEECTT-STTEEEEEESSSCEEEEESSCG-
T ss_pred EEE-EECCCCCCEEEEECCCCCEEEEECCCCC-EEEEE-EECCCCCCCCCHHHHHC-CCCEEEEEECCCCEEEEECCCC-
T ss_conf 899-9836887226655057863887889996-40123-30023344421111213-5305998213542068989999-
Q ss_pred CCEEEEECCCCCEEEEEECCCC-CEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEEC-CCCEEEEEE
Q ss_conf 3159990579986999990799-98999967990999967992689983457864445678738999936-997899998
Q 000700 1258 DAYLTIDAHRGSLSALAVHRHA-PIIASGSAKQLIKVFSLEGEQLGTIRYHHPSFMAQKIGSVNCLTFHP-YQVLLAAGS 1335 (1344)
Q Consensus 1258 ~~i~~l~~h~~~ItsLa~sp~g-~~LasgS~Dg~I~Iwd~~g~~l~~l~~~h~~f~~~~~~~V~slafsp-dg~~Lasgs 1335 (1344)
+.+.++.+|...|++++|+|++ .+|++|+.|+.|+|||.....+....+ |. +.|++++|+| ++.+|++++
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~-H~-------~~V~~vafsP~d~~~l~s~s 331 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS-HR-------DFVTGVAWSPLDHSKFTTVG 331 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC-CS-------SCEEEEEECSSSTTEEEEEE
T ss_pred CEEEEEECCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEECC-CC-------CCEEEEEEECCCCCEEEEEC
T ss_conf 58289935531387799768999899999589979999899995869788-99-------98899999589999999991
Q ss_pred CCCEEEECC
Q ss_conf 898099919
Q 000700 1336 ADACVSIHS 1344 (1344)
Q Consensus 1336 ~Dg~I~IWd 1344 (1344)
.||.|++|+
T Consensus 332 ~Dg~v~iW~ 340 (357)
T 4g56_B 332 WDHKVLHHH 340 (357)
T ss_dssp TTSCEEEEE
T ss_pred CCCEEEEEE
T ss_conf 899599997
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=1.00 E-value=1 Score=298.70 Aligned_cols=289 Identities=12% Similarity=0.174 Sum_probs=249.2
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 67899817999947999999997899499998799937888407999999848999986089989999978980999835
Q 000700 1028 TRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1028 ~~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
..|...|.+++|+|++.+|++|+.||.|++||..+++....+..|. ..|.+++| ++++.++++++.|+.+++|++
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~---~~v~~~~~--sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC---TWVMACAY--APSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS---SCCCEEEE--CTTSSEEEEESTTSEEEEEEC
T ss_pred CCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEECCC---CCEEEEEE--CCCCCEEEEEECCCCEEEEEE
T ss_conf 4889808899998999989999289829999899987535774278---87799999--899997997138998899997
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECC-
Q ss_conf 5778850598601023578997223503799935999699998898199998778962466534999998269998759-
Q 000700 1108 YDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQV- 1186 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~Vtsl~~~s~- 1186 (1344)
........ ......+.+|...+.+ +.|++++..+++++.|+.|++||+++++ ++..+.+|... |.++. +.+
T Consensus 136 ~~~~~~~~-~~~~~~~~~h~~~v~~----~~~~~~~~~l~t~s~D~~v~lwd~~~~~-~~~~~~~h~~~-v~~~~-~~~~ 207 (354)
T 2pbi_B 136 TFDKNENM-AAKKKSVAMHTNYLSA----CSFTNSDMQILTASGDGTCALWDVESGQ-LLQSFHGHGAD-VLCLD-LAPS 207 (354)
T ss_dssp CCCTTCCS-GGGCEEEEECSSCEEE----EEECSSSSEEEEEETTSEEEEEETTTCC-EEEEEECCSSC-EEEEE-ECCC
T ss_pred ECCCCCCC-CCCCEEEECCCCCEEE----EEEECCCCEEEEEECCCCEEEEECCCCE-EEEEECCCCCC-EEEEE-EEEC
T ss_conf 42566553-3331163066784789----9996899999999189958997677781-99999278998-69999-8757
Q ss_pred -CCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEC
Q ss_conf -9989999977990999987899702684257887877859999920899999999978992999977888631599905
Q 000700 1187 -HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDA 1265 (1344)
Q Consensus 1187 -dg~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~~l~~ 1265 (1344)
+++.+++|+.||.|++||+++++ .+..+. +|...|.+++|+|+ +..+++|+.|+.|++||++.. ..+..+..
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~-~~~~~~---~h~~~v~~v~~~p~--~~~l~s~s~D~~v~lwd~~~~-~~~~~~~~ 280 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQ-CVQAFE---THESDVNSVRYYPS--GDAFASGSDDATCRLYDLRAD-REVAIYSK 280 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCC-EEEEEC---CCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTT-EEEEEECC
T ss_pred CCCCEEEEEECCCEEEEEECCCCC-EEEEEC---CCCCCEEEEEEECC--CCEEEEEECCCEEEEEECCCC-CEEEEECC
T ss_conf 999999999479959999888992-779835---88788179999589--998999969981999988899-67888747
Q ss_pred C--CCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEE
Q ss_conf 7--998699999079998999967990999967-9926899834578644456787389999369978999988980999
Q 000700 1266 H--RGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSI 1342 (1344)
Q Consensus 1266 h--~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~-~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~~Lasgs~Dg~I~I 1342 (1344)
+ ...+++++|+|++.++++|+.|+.|++||+ +++.+..+.+ |. +.|++++|+|++.+|++|+.|+.|++
T Consensus 281 ~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~-h~-------~~v~~l~~spdg~~l~sgs~D~~v~v 352 (354)
T 2pbi_B 281 ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG-HE-------NRVSTLRVSPDGTAFCSGSWDHTLRV 352 (354)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-CS-------SCEEEEEECTTSSCEEEEETTSEEEE
T ss_pred CCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CC-------CCEEEEEECCCCCEEEEECCCCCEEE
T ss_conf 87403455999947999999997899299998988955779987-89-------95789999899999999828888896
Q ss_pred CC
Q ss_conf 19
Q 000700 1343 HS 1344 (1344)
Q Consensus 1343 Wd 1344 (1344)
|+
T Consensus 353 W~ 354 (354)
T 2pbi_B 353 WA 354 (354)
T ss_dssp EC
T ss_pred CC
T ss_conf 19
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=297.74 Aligned_cols=283 Identities=19% Similarity=0.320 Sum_probs=249.5
Q ss_pred CCCCCCEEEEEECCC----CCEEEEEECCCCEEEEECCCCCE--EEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCE
Q ss_conf 678998179999479----99999997899499998799937--888407999999848999986089989999978980
Q 000700 1028 TRFEKGTKTALLQPF----SPIVVAADENERIKIWNYEEDTL--LNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGN 1101 (1344)
Q Consensus 1028 ~~~~~~I~si~fspd----g~~Latgs~dg~I~IWd~~tg~~--i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~ 1101 (1344)
..|...|.+++|+++ +.+|++|+.|+.|+||++.+++. ...+.+|. ..|.++.| ++++.++++++.|+.
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~---~~v~~~~~--~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ---LGVVSVDI--SHTLPIAASSSLDAH 103 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS---SCEEEEEE--CSSSSEEEEEETTSE
T ss_pred CCCCCCEEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCEEEEEEECCCC---CCEEEEEE--CCCCCEEEEEECCCC
T ss_conf 5688967999982488888888999849998999889899743666005677---88899998--899998999937980
Q ss_pred EEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 99983557788505986010235789972235037999359996999988981999987789624665349999982699
Q 000700 1102 IRIWKDYDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISAL 1181 (1344)
Q Consensus 1102 IrIWdi~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~Vtsl 1181 (1344)
|++||+.+ ++. + ..+..+...+.+ ++|++++..+++++.+|.|++||++.+. ....+..+... |.++
T Consensus 104 i~lWd~~~--~~~--~---~~~~~~~~~~~~----~~~spdg~~l~~g~~dg~v~i~~~~~~~-~~~~~~~~~~~-v~~~ 170 (321)
T 3ow8_A 104 IRLWDLEN--GKQ--I---KSIDAGPVDAWT----LAFSPDSQYLATGTHVGKVNIFGVESGK-KEYSLDTRGKF-ILSI 170 (321)
T ss_dssp EEEEETTT--TEE--E---EEEECCTTCCCC----EEECTTSSEEEEECTTSEEEEEETTTCS-EEEEEECSSSC-EEEE
T ss_pred EEEEECCC--CCE--E---EEEECCCCCEEE----EEECCCCCEEEEECCCCCEEEEECCCCC-EEEEECCCCCE-EEEE
T ss_conf 99997899--979--8---999379856799----9999999989998389919999867994-66774389942-9999
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEE
Q ss_conf 98759998999997799099998789970268425788787785999992089999999997899299997788863159
Q 000700 1182 TASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYL 1261 (1344)
Q Consensus 1182 ~~~s~dg~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~ 1261 (1344)
.++++++++++|+.||.|++||+++++ .+..++ +|...|.+++|+|+ +.+|++|+.||.|++||++.. ....
T Consensus 171 -~~spdg~~lasg~~dg~i~iwd~~~~~-~~~~~~---~h~~~v~~l~~spd--~~~l~s~s~dg~i~iwd~~~~-~~~~ 242 (321)
T 3ow8_A 171 -AYSPDGKYLASGAIDGIINIFDIATGK-LLHTLE---GHAMPIRSLTFSPD--SQLLVTASDDGYIKIYDVQHA-NLAG 242 (321)
T ss_dssp -EECTTSSEEEEEETTSCEEEEETTTTE-EEEEEC---CCSSCCCEEEECTT--SCEEEEECTTSCEEEEETTTC-CEEE
T ss_pred -EECCCCCEEEEECCCCEEEEEECCCCC-EEEEEC---CCCCCEEEEEECCC--CCEEEEECCCCEEEEEECCCC-CEEE
T ss_conf -998999999999289839999999990-999980---25896018999489--998999909980999878996-3258
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEE
Q ss_conf 99057998699999079998999967990999967-99268998345786444567873899993699789999889809
Q 000700 1262 TIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACV 1340 (1344)
Q Consensus 1262 ~l~~h~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~-~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~~Lasgs~Dg~I 1340 (1344)
.+.+|...|++++|+|++.+|++++.|+.|++||+ +++.+..+.. |. +.|.+++|+|++.+|++++.||.|
T Consensus 243 ~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~-------~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 243 TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQ-------DQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CS-------SCEEEEEECTTSSEEEEEETTCCE
T ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECC-CC-------CCEEEEEECCCCCEEEEEECCCEE
T ss_conf 9868888268999979999899981898099994999888889837-87-------738999998999999997589808
Q ss_pred EECC
Q ss_conf 9919
Q 000700 1341 SIHS 1344 (1344)
Q Consensus 1341 ~IWd 1344 (1344)
++||
T Consensus 315 ~vwd 318 (321)
T 3ow8_A 315 HIYD 318 (321)
T ss_dssp EEEE
T ss_pred EEEE
T ss_conf 9995
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=1.00 E-value=1 Score=291.54 Aligned_cols=285 Identities=18% Similarity=0.287 Sum_probs=244.5
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 67899817999947999999997899499998799937888407999999848999986089989999978980999835
Q 000700 1028 TRFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1028 ~~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
..|...|++++|+|++++|++++.||.|++||+++++.+..+..|. ..|.++.| .+++++|++|+.|+.|++||.
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~---~~v~~~~~--~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE---TPVRAGKF--IARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS---SCEEEEEE--EGGGTEEEEEETTSEEEEEET
T ss_pred CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEEECCC---CCEEEEEE--ECCCCEEEEECCCCEEEEEEC
T ss_conf 0788856899989999879998279969998788882667760567---74889999--689998999889997999999
Q ss_pred CCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECC-
Q ss_conf 5778850598601023578997223503799935999699998898199998778962466534999998269998759-
Q 000700 1108 YDQKDKQKLVTAFSSIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPIPSSSDCSISALTASQV- 1186 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i~~~~~~~Vtsl~~~s~- 1186 (1344)
.+ ++.. ..+.+|...+.+ ++|++++..+++++.|+.|++||++++......+.+|... |.++ .++|
T Consensus 85 ~~--~~~~-----~~~~~h~~~v~~----~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~-v~~v-~~~p~ 151 (304)
T 2ynn_A 85 NT--GEKV-----VDFEAHPDYIRS----IAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF-VMCV-AFNPK 151 (304)
T ss_dssp TT--CCEE-----EEEECCSSCEEE----EEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC-EEEE-EECTT
T ss_pred CC--CCEE-----EEEECCCCCEEE----EEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCCCCC-EEEE-EECCC
T ss_conf 99--9678-----998079980899----9995999999998799819999899992231010566895-7999-98889
Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECC
Q ss_conf 99899999779909999878997026842578878778599999208999999999789929999778886315999057
Q 000700 1187 HGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLTIDAH 1266 (1344)
Q Consensus 1187 dg~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~~l~~h 1266 (1344)
++..+++|+.||.|++||++......... .+|...+..+.+.+..++.++++|+.||.|++||++++ .++.++.+|
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~~h 227 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTPNFTLT---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK-SCVATLEGH 227 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSCSEEEE---CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT-EEEEEEECC
T ss_pred CCCEEEEEECCCEEEEEECCCCCCCCEEC---CCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEECCCC-CCCEEECCC
T ss_conf 99989999189839999899997663321---68747577899998699999999869991999967898-602464798
Q ss_pred CCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC--EEEEEECCCEEEE
Q ss_conf 998699999079998999967990999967-992689983457864445678738999936997--8999988980999
Q 000700 1267 RGSLSALAVHRHAPIIASGSAKQLIKVFSL-EGEQLGTIRYHHPSFMAQKIGSVNCLTFHPYQV--LLAAGSADACVSI 1342 (1344)
Q Consensus 1267 ~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~-~g~~l~~l~~~h~~f~~~~~~~V~slafspdg~--~Lasgs~Dg~I~I 1342 (1344)
...|++++|+|++++|++|+.|+.|++||. +++.+..+.. |. ..+++++|+|++. ++++|+.||.+.+
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~asg~~~g~~~~ 298 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV-GL-------ERSWCIATHPTGRKNYIASGFDNGFTVL 298 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-SS-------SSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred CCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEECCC-CC-------CCEEEEEECCCCCCEEEEEECCCCEEEE
T ss_conf 88889999889999899993899599998998714564468-98-------6089999878998169999638946999
No 9
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=290.78 Aligned_cols=292 Identities=15% Similarity=0.213 Sum_probs=221.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE-------CCCCCCCCEEEEEEEEECCCCEEEEEECCCE
Q ss_conf 789981799994799999999789949999879993788840-------7999999848999986089989999978980
Q 000700 1029 RFEKGTKTALLQPFSPIVVAADENERIKIWNYEEDTLLNSFD-------NHDFPDKGISKLCLVNELDVSLLLVASCNGN 1101 (1344)
Q Consensus 1029 ~~~~~I~si~fspdg~~Latgs~dg~I~IWd~~tg~~i~~l~-------~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~ 1101 (1344)
.|...|.+++|+|++++|++++.|+.|++||..+++.+..+. +|. ..|.+++| ++++.+|++++.|++
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~---~~V~~v~~--spdg~~l~s~s~D~~ 262 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS---GSVFGLTW--SPDGTKIASASADKT 262 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS---SCEEEEEE--CTTSSEEEEEETTSE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCC---CCEEEEEE--CCCCCEEEEEECCCE
T ss_conf 0257169999979999899998999199988999828665136643235667---87899999--799999999908980
Q ss_pred EEEEECCCCCCCEEEE------------------------------------EEEECCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf 9998355778850598------------------------------------6010235789972235037999359996
Q 000700 1102 IRIWKDYDQKDKQKLV------------------------------------TAFSSIQGHKPGVRCSNVVVDWQQQSGY 1145 (1344)
Q Consensus 1102 IrIWdi~~~~~~~~lv------------------------------------~~~~~l~~h~~~V~s~~~~v~ws~~~~~ 1145 (1344)
|++||+.+.+....+. .....+.+|...+.+ ++|++++..
T Consensus 263 v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~----l~~spdg~~ 338 (611)
T 1nr0_A 263 IKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITA----LSSSADGKT 338 (611)
T ss_dssp EEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEE----EEECTTSSE
T ss_pred EEEEECCCCCEEEEECCCCCCCCEEEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCCCCCEEE----EEEECCCCE
T ss_conf 9999688870134404788766406899973887999958996899968899744698378888899----999189998
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEEC-CC---------------------------------------------------
Q ss_conf 99998898199998778962466534-99---------------------------------------------------
Q 000700 1146 LYASGEVSSIMLWDLEKEQQMVNPIP-SS--------------------------------------------------- 1173 (1344)
Q Consensus 1146 Llaag~Dg~I~IWDl~s~~~~v~~i~-~~--------------------------------------------------- 1173 (1344)
+++++.|+.|++||+.++. +...+. .|
T Consensus 339 l~s~s~D~~v~~Wd~~~~~-~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~ 417 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGI-SNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGL 417 (611)
T ss_dssp EEEEETTSCEEEEETTTCC-EEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEE
T ss_pred EEEEECCCCEEEEECCCCC-EEEECCCCCCCEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEE
T ss_conf 9999589849999788792-563216677650789998789969999848966895468854356521200148997079
Q ss_pred -----------------------------CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCC
Q ss_conf -----------------------------999826999875999899999779909999878997026842578878778
Q 000700 1174 -----------------------------SDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCSTRPHTQQVER 1224 (1344)
Q Consensus 1174 -----------------------------~~~~Vtsl~~~s~dg~~LvsGs~DGsIrIwDlr~~~~~v~~~~~~~~h~~~ 1224 (1344)
....+.++ .++++++++++|+.||.|++||+.... ..... . .+|...
T Consensus 418 ~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~v-a~spdg~~lasgs~D~~v~lwd~~~~~-~~~~~-~-~~h~~~ 493 (611)
T 1nr0_A 418 AVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV-ALSNDKQFVAVGGQDSKVHVYKLSGAS-VSEVK-T-IVHPAE 493 (611)
T ss_dssp EECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEE-EECTTSCEEEEEETTSEEEEEEEETTE-EEEEE-E-EECSSC
T ss_pred EEECCCCEEEEEECCEEEEEECCCEEEEECCCCCEEE-EEECCCCEEEEECCCCEEEEEECCCCC-EEEEE-C-CCCCCC
T ss_conf 9807996999996763999848943464068895499-992899899996899739999945992-22410-1-577886
Q ss_pred EEEEEEECCCCCCEEEEEECCCCEEEEECCCCCCCEEE--EECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC-C-E
Q ss_conf 59999920899999999978992999977888631599--905799869999907999899996799099996799-2-6
Q 000700 1225 VVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKDAYLT--IDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLEG-E-Q 1300 (1344)
Q Consensus 1225 I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~~i~~--l~~h~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~~g-~-~ 1300 (1344)
|++++|+|+ +++|++++.|+.|++||+....+.... +..|...|++++|+|++++|++|+.|++|++|++.. . .
T Consensus 494 v~~v~fspd--g~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~ 571 (611)
T 1nr0_A 494 ITSVAFSNN--GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDH 571 (611)
T ss_dssp EEEEEECTT--SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSC
T ss_pred EEEEEECCC--CCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC
T ss_conf 079999899--998999948998999885778722321026404664258998998997999979972999978875556
Q ss_pred E-EEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECC
Q ss_conf 8-9983457864445678738999936997899998898099919
Q 000700 1301 L-GTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344 (1344)
Q Consensus 1301 l-~~l~~~h~~f~~~~~~~V~slafspdg~~Lasgs~Dg~I~IWd 1344 (1344)
+ ..+.+ |. .+.|++++|+|++. |++++.|+.|++|+
T Consensus 572 ~~~~~~~-h~------~~~v~~v~fs~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 572 PIIIKGA-HA------MSSVNSVIWLNETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp CEEETTS-ST------TSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred CCHHHCC-CC------CCCEEEEEECCCCE-EEEECCCCCEEEEE
T ss_conf 3264446-76------56711899858997-99952887789984
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=290.43 Aligned_cols=290 Identities=16% Similarity=0.257 Sum_probs=232.6
Q ss_pred CCCCCEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEEEECCCCEEEEEECCCEEEEEEC
Q ss_conf 7899817999947999-999997899499998799937888407999999848999986089989999978980999835
Q 000700 1029 RFEKGTKTALLQPFSP-IVVAADENERIKIWNYEEDTLLNSFDNHDFPDKGISKLCLVNELDVSLLLVASCNGNIRIWKD 1107 (1344)
Q Consensus 1029 ~~~~~I~si~fspdg~-~Latgs~dg~I~IWd~~tg~~i~~l~~h~~~~~~ItsL~f~ns~d~~~Litgs~DG~IrIWdi 1107 (1344)
.|...|.+++|+|+++ .|++|+.|+.|++|+..+++....+.+|. ..|.+++| ++++.+|++++.|+.|++|+.
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~---~~V~~v~f--spdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT---KFVHSVRY--NPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCS---SCEEEEEE--CTTSSEEEEEETTSCEEEEET
T ss_pred CCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEECCCC---CCEEEEEE--CCCCCEEEEEECCCCEEEEEC
T ss_conf 7889836999889998299999289809999799975766520025---71699999--799998999989991999889
Q ss_pred CCCCCCEEEEEEEE----CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCCEEEEEE-------------
Q ss_conf 57788505986010----2357899722350379993599969999889819999877896246653-------------
Q 000700 1108 YDQKDKQKLVTAFS----SIQGHKPGVRCSNVVVDWQQQSGYLYASGEVSSIMLWDLEKEQQMVNPI------------- 1170 (1344)
Q Consensus 1108 ~~~~~~~~lv~~~~----~l~~h~~~V~s~~~~v~ws~~~~~Llaag~Dg~I~IWDl~s~~~~v~~i------------- 1170 (1344)
.+ ++.... +. ...+|...|.+ ++|++++..+++++.|+.|++||+.+++ ++..+
T Consensus 220 ~~--g~~~~~--~~~~~~~~~~h~~~V~~----v~~spdg~~l~s~s~D~~v~lWd~~~~~-~~~~~~~~~~~~~~~~~~ 290 (611)
T 1nr0_A 220 VD--GTKTGV--FEDDSLKNVAHSGSVFG----LTWSPDGTKIASASADKTIKIWNVATLK-VEKTIPVGTRIEDQQLGI 290 (611)
T ss_dssp TT--CCEEEE--CBCTTSSSCSSSSCEEE----EEECTTSSEEEEEETTSEEEEEETTTTE-EEEEEECCSSGGGCEEEE
T ss_pred CC--CCEEEE--ECCCCCCCCCCCCCEEE----EEECCCCCEEEEEECCCEEEEEECCCCC-EEEEECCCCCCCCEEEEE
T ss_conf 99--828665--13664323566787899----9997999999999089809999688870-134404788766406899
Q ss_pred ------------------------------CCCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE-----
Q ss_conf ------------------------------499999826999875999899999779909999878997026842-----
Q 000700 1171 ------------------------------PSSSDCSISALTASQVHGGQLAAGFVDGSVRLYDVRTPDMLVCST----- 1215 (1344)
Q Consensus 1171 ------------------------------~~~~~~~Vtsl~~~s~dg~~LvsGs~DGsIrIwDlr~~~~~v~~~----- 1215 (1344)
.+|.. .|+++ .++++++++++++.||.|++||+.++.. ...+
T Consensus 291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~-~v~~l-~~spdg~~l~s~s~D~~v~~Wd~~~~~~-~~~~~~~h~ 367 (611)
T 1nr0_A 291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNK-AITAL-SSSADGKTLFSADAEGHINSWDISTGIS-NRVFPDVHA 367 (611)
T ss_dssp EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS-CEEEE-EECTTSSEEEEEETTSCEEEEETTTCCE-EECSSCSCS
T ss_pred EECCCEEEEEECCCCEEEEECCCCCCCEEECCCCC-CEEEE-EEECCCCEEEEEECCCCEEEEECCCCCE-EEECCCCCC
T ss_conf 97388799995899689996889974469837888-88999-9918999899995898499997887925-632166776
Q ss_pred --------------------------CCC-------------------------C-----------------------CC
Q ss_conf --------------------------578-------------------------8-----------------------78
Q 000700 1216 --------------------------RPH-------------------------T-----------------------QQ 1221 (1344)
Q Consensus 1216 --------------------------~~~-------------------------~-----------------------~h 1221 (1344)
... . .|
T Consensus 368 ~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~ 447 (611)
T 1nr0_A 368 TMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPI 447 (611)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEEC
T ss_pred CEEEEEEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEEECCEEEEEECCCEEEEEC
T ss_conf 50789998789969999848966895468854356521200148997079980799699999676399984894346406
Q ss_pred CCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCCCC-CEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECC--C
Q ss_conf 7785999992089999999997899299997788863-159990579986999990799989999679909999679--9
Q 000700 1222 VERVVGISFQPGLDPAKIVSASQAGDIQFLDIRNHKD-AYLTIDAHRGSLSALAVHRHAPIIASGSAKQLIKVFSLE--G 1298 (1344)
Q Consensus 1222 ~~~I~sI~~sp~~~g~~Lvsgs~DG~I~IWDl~~~~~-~i~~l~~h~~~ItsLa~sp~g~~LasgS~Dg~I~Iwd~~--g 1298 (1344)
...+.+++|+|+ ++++++|+.|+.|++||+..... .... ..|...|++++|+|++.+|++++.|+.|++|+.. +
T Consensus 448 ~~~v~~va~spd--g~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~ 524 (611)
T 1nr0_A 448 SYNSSCVALSND--KQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF 524 (611)
T ss_dssp SSCEEEEEECTT--SCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT
T ss_pred CCCCEEEEEECC--CCEEEEECCCCEEEEEECCCCCEEEEEC-CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 889549999289--9899996899739999945992224101-5778860799998999989999489989998857787
Q ss_pred CEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCEEEECC
Q ss_conf 2689983457864445678738999936997899998898099919
Q 000700 1299 EQLGTIRYHHPSFMAQKIGSVNCLTFHPYQVLLAAGSADACVSIHS 1344 (1344)
Q Consensus 1299 ~~l~~l~~~h~~f~~~~~~~V~slafspdg~~Lasgs~Dg~I~IWd 1344 (1344)
+.+.. ...+.|.+.|++++|+|++++|++++.|+.|++|+
T Consensus 525 ~~~~~------~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~ 564 (611)
T 1nr0_A 525 ELAHT------NSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWN 564 (611)
T ss_dssp EESCC------CCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEE------EEEEECCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 22321------02640466425899899899799997997299997
Done!