Query 000701
Match_columns 1344
No_of_seqs 456 out of 6247
Neff 10.1
Searched_HMMs 13730
Date Tue Mar 26 16:04:18 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000701.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_474-477//hhsearch_scop/000701hhsearch_scop
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2a5yb3 c.37.1.20 (B:109-385) 100.0 1.3E-44 0 291.4 14.7 242 152-408 19-277 (277)
2 d2omza2 c.10.2.1 (A:33-416) In 99.9 7.6E-23 5.5E-27 155.3 25.6 79 551-631 42-120 (384)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 3.8E-22 2.8E-26 150.9 28.3 95 559-658 28-122 (384)
4 d1xkua_ c.10.2.7 (A:) Decorin 99.8 2.9E-18 2.1E-22 126.7 22.1 95 554-651 32-129 (305)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.8 4.6E-17 3.4E-21 119.2 23.6 98 554-657 11-111 (305)
6 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 2.2E-16 1.6E-20 114.9 24.3 73 553-631 58-130 (353)
7 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 4.7E-16 3.4E-20 112.9 24.6 94 554-658 39-132 (353)
8 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 4.1E-18 3E-22 125.7 13.6 104 553-657 50-160 (313)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.8 3.6E-17 2.6E-21 119.8 16.6 168 514-698 20-189 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.7 3.2E-17 2.3E-21 120.2 12.9 114 541-658 22-136 (266)
11 d1ogqa_ c.10.2.8 (A:) Polygala 99.7 1E-16 7.4E-21 117.0 14.5 132 525-658 49-186 (313)
12 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 1.1E-15 7.8E-20 110.6 14.6 80 550-631 38-117 (227)
13 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 8E-15 5.8E-19 105.2 17.3 103 554-657 33-140 (284)
14 d1ozna_ c.10.2.7 (A:) Reticulo 99.6 1.8E-14 1.3E-18 103.0 17.0 141 513-658 20-165 (284)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 1.1E-14 7.9E-19 104.3 15.0 94 558-656 24-117 (227)
16 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 2.6E-14 1.9E-18 102.0 16.9 99 552-655 45-143 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 99.6 6.4E-15 4.7E-19 105.8 13.5 101 551-656 38-138 (199)
18 d1h6ta2 c.10.2.1 (A:31-240) In 99.6 4.2E-14 3.1E-18 100.7 16.9 79 551-631 88-166 (210)
19 d2omxa2 c.10.2.1 (A:37-235) In 99.6 6.3E-14 4.6E-18 99.6 15.9 80 573-656 37-116 (199)
20 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.5 4.8E-14 3.5E-18 100.3 11.3 200 147-360 6-258 (283)
21 d2astb2 c.10.1.3 (B:2136-2419) 99.5 3.7E-15 2.7E-19 107.3 3.3 250 984-1317 23-276 (284)
22 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 1E-12 7.5E-17 92.0 14.1 99 556-656 11-113 (242)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 3.9E-13 2.8E-17 94.6 9.2 109 549-658 14-124 (162)
24 d1dcea3 c.10.2.2 (A:444-567) R 99.3 9.3E-12 6.8E-16 86.0 12.0 100 556-658 1-102 (124)
25 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 3.7E-12 2.7E-16 88.5 9.9 114 541-658 20-138 (192)
26 d1a9na_ c.10.2.4 (A:) Spliceso 99.3 1.9E-12 1.4E-16 90.3 8.4 128 520-653 12-146 (162)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.3 1.1E-11 8.3E-16 85.5 12.1 117 529-651 1-122 (124)
28 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.3 1.1E-10 8E-15 79.3 16.3 78 554-631 30-113 (242)
29 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.3 1.4E-11 1E-15 84.9 10.5 122 556-691 11-136 (192)
30 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.2 3.1E-14 2.3E-18 101.5 -5.2 104 554-658 3-124 (460)
31 d1fnna2 c.37.1.20 (A:1-276) CD 99.2 1.3E-08 9.4E-13 66.4 23.5 169 152-321 15-205 (276)
32 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 2.2E-12 1.6E-16 90.0 2.4 107 549-658 44-152 (198)
33 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 3.5E-12 2.6E-16 88.7 1.4 125 555-692 25-151 (198)
34 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.1 4E-12 2.9E-16 88.3 0.9 103 527-631 3-122 (460)
35 d1sxjb2 c.37.1.20 (B:7-230) Re 99.1 6E-10 4.4E-14 74.7 11.8 183 150-347 12-198 (224)
36 d1sxjc2 c.37.1.20 (C:12-238) R 99.1 1.2E-09 8.4E-14 72.9 13.1 179 151-345 12-194 (227)
37 d1w5sa2 c.37.1.20 (A:7-293) CD 99.1 9.8E-08 7.1E-12 60.9 21.3 199 152-350 15-259 (287)
38 d1r6bx2 c.37.1.20 (X:169-436) 99.1 5.3E-09 3.9E-13 68.8 14.7 155 153-321 18-194 (268)
39 d1iqpa2 c.37.1.20 (A:2-232) Re 99.0 2.4E-09 1.7E-13 71.0 11.6 179 151-346 22-205 (231)
40 d1njfa_ c.37.1.20 (A:) delta p 99.0 3.7E-08 2.7E-12 63.6 17.2 183 151-351 10-217 (239)
41 d1sxjd2 c.37.1.20 (D:26-262) R 99.0 1.9E-09 1.4E-13 71.6 8.8 193 152-350 11-209 (237)
42 d1qvra2 c.37.1.20 (A:149-535) 98.9 2.2E-08 1.6E-12 64.9 13.3 154 153-321 22-197 (387)
43 d1sxje2 c.37.1.20 (E:4-255) Re 98.9 1.2E-08 8.6E-13 66.6 10.9 191 151-347 9-229 (252)
44 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 1.4E-08 1E-12 66.2 9.9 98 558-657 13-114 (156)
45 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 3.3E-08 2.4E-12 63.8 9.7 90 541-631 20-113 (156)
46 d1in4a2 c.37.1.20 (A:17-254) H 98.7 1.4E-06 1.1E-10 53.6 17.3 169 152-349 8-204 (238)
47 d1jbka_ c.37.1.20 (A:) ClpB, A 98.7 9.4E-08 6.9E-12 61.0 11.2 151 153-317 22-194 (195)
48 d1sxja2 c.37.1.20 (A:295-547) 98.7 5.4E-08 3.9E-12 62.5 9.2 186 152-351 13-227 (253)
49 d1lv7a_ c.37.1.20 (A:) AAA dom 98.7 3.4E-07 2.5E-11 57.5 12.4 172 153-346 12-218 (256)
50 d1ixza_ c.37.1.20 (A:) AAA dom 98.6 2.4E-07 1.7E-11 58.5 11.4 177 148-346 4-215 (247)
51 d1e32a2 c.37.1.20 (A:201-458) 98.6 4.4E-07 3.2E-11 56.8 12.2 172 153-346 4-208 (258)
52 d1ixsb2 c.37.1.20 (B:4-242) Ho 98.6 3.6E-06 2.6E-10 51.2 16.5 170 152-349 8-205 (239)
53 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.6 1.2E-07 8.8E-12 60.3 9.0 37 550-586 28-69 (344)
54 d1a5ta2 c.37.1.20 (A:1-207) de 98.6 3.9E-06 2.9E-10 50.9 16.3 179 157-348 6-201 (207)
55 d1d2na_ c.37.1.20 (A:) Hexamer 98.5 1.1E-05 8.2E-10 48.0 16.4 149 153-320 9-187 (246)
56 d1l8qa2 c.37.1.20 (A:77-289) C 98.4 2.7E-06 1.9E-10 52.0 12.3 149 155-322 13-179 (213)
57 d1r7ra3 c.37.1.20 (A:471-735) 98.3 4.2E-06 3E-10 50.7 9.6 150 173-346 40-214 (265)
58 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.2 1.7E-06 1.2E-10 53.2 7.2 18 570-587 25-42 (344)
59 d1koha1 c.10.2.3 (A:201-362) m 97.8 5.5E-06 4E-10 49.9 2.7 84 544-627 56-152 (162)
60 d2gnoa2 c.37.1.20 (A:11-208) g 97.7 0.00025 1.8E-08 39.6 10.3 130 161-308 2-138 (198)
61 d1r6bx3 c.37.1.20 (X:437-751) 97.7 7.3E-05 5.3E-09 43.0 7.0 129 153-291 22-172 (315)
62 d1qvra3 c.37.1.20 (A:536-850) 97.6 5.1E-05 3.7E-09 43.9 6.0 105 154-265 24-137 (315)
63 d1mo6a1 c.37.1.11 (A:1-269) Re 97.4 0.0021 1.5E-07 33.8 12.7 85 173-265 59-150 (269)
64 d1koha1 c.10.2.3 (A:201-362) m 97.4 1E-05 7.3E-10 48.3 -0.5 41 574-614 63-107 (162)
65 d1xp8a1 c.37.1.11 (A:15-282) R 97.3 0.002 1.4E-07 34.0 10.4 85 173-265 56-147 (268)
66 d1u94a1 c.37.1.11 (A:6-268) Re 97.1 0.0036 2.6E-07 32.4 10.3 84 173-264 53-143 (263)
67 d1okkd2 c.37.1.10 (D:97-303) G 97.1 0.0035 2.5E-07 32.5 10.1 61 172-234 4-65 (207)
68 d2qy9a2 c.37.1.10 (A:285-495) 97.1 0.0049 3.6E-07 31.5 10.9 89 172-263 7-101 (211)
69 d1ls1a2 c.37.1.10 (A:89-295) G 97.1 0.0048 3.5E-07 31.6 10.6 61 172-234 8-69 (207)
70 d1ihua2 c.37.1.10 (A:308-586) 97.0 0.0013 9.8E-08 35.1 7.2 53 161-215 7-59 (279)
71 d1j8yf2 c.37.1.10 (F:87-297) G 96.9 0.0024 1.7E-07 33.5 8.2 90 172-263 10-104 (211)
72 d2p67a1 c.37.1.10 (A:1-327) LA 96.9 0.0021 1.5E-07 33.8 7.8 66 162-227 40-107 (327)
73 d1ofha_ c.37.1.20 (A:) HslU {H 96.9 0.00087 6.3E-08 36.2 5.8 56 154-214 15-84 (309)
74 d2jdid3 c.37.1.11 (D:82-357) C 96.9 0.0055 4E-07 31.2 9.8 100 165-265 58-180 (276)
75 d1rz3a_ c.37.1.6 (A:) Hypothet 96.9 0.0011 8E-08 35.6 6.0 31 171-201 19-49 (198)
76 d2qm8a1 c.37.1.10 (A:5-327) Me 96.9 0.0022 1.6E-07 33.7 7.4 57 161-217 36-94 (323)
77 d1vmaa2 c.37.1.10 (A:82-294) G 96.8 0.0048 3.5E-07 31.6 9.1 90 172-263 9-103 (213)
78 d1xpua3 c.37.1.11 (A:129-417) 96.8 0.0026 1.9E-07 33.3 7.3 99 164-265 32-142 (289)
79 d1tf7a2 c.37.1.11 (A:256-497) 96.8 0.0059 4.3E-07 31.0 9.1 40 173-214 25-64 (242)
80 d1ukza_ c.37.1.1 (A:) Uridylat 96.7 0.0054 3.9E-07 31.3 8.7 29 171-199 5-33 (196)
81 d1m8pa3 c.37.1.15 (A:391-573) 96.7 0.0015 1.1E-07 34.8 5.8 38 173-211 5-42 (183)
82 d1w44a_ c.37.1.11 (A:) NTPase 96.7 0.0091 6.7E-07 29.9 9.9 73 173-265 122-194 (321)
83 d1np6a_ c.37.1.10 (A:) Molybdo 96.7 0.0011 7.8E-08 35.7 5.0 28 174-201 2-29 (170)
84 d1lw7a2 c.37.1.1 (A:220-411) T 96.7 0.00055 4E-08 37.5 3.5 26 174-199 7-32 (192)
85 d1sq5a_ c.37.1.6 (A:) Pantothe 96.7 0.0074 5.4E-07 30.4 9.1 87 173-261 79-169 (308)
86 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.7 0.0012 8.5E-08 35.4 4.9 28 175-202 2-29 (189)
87 d1g8pa_ c.37.1.20 (A:) ATPase 96.6 0.00097 7.1E-08 35.9 3.9 49 150-198 4-52 (333)
88 d1gvnb_ c.37.1.21 (B:) Plasmid 96.6 0.0028 2E-07 33.1 6.2 28 172-199 30-57 (273)
89 d1kaga_ c.37.1.2 (A:) Shikimat 96.5 0.00068 4.9E-08 36.9 2.9 25 175-199 3-27 (169)
90 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.0014 1E-07 34.9 4.4 29 171-199 3-31 (194)
91 d2bdta1 c.37.1.25 (A:1-176) Hy 96.5 0.0012 9E-08 35.3 3.8 24 175-198 3-26 (176)
92 d1ihua1 c.37.1.10 (A:1-296) Ar 96.4 0.0052 3.8E-07 31.4 6.7 31 171-201 5-35 (296)
93 d1x6va3 c.37.1.4 (A:34-228) Ad 96.3 0.0015 1.1E-07 34.7 3.8 28 174-201 19-46 (195)
94 d1cp2a_ c.37.1.10 (A:) Nitroge 96.3 0.0043 3.1E-07 31.9 6.0 39 175-215 2-40 (269)
95 d1khta_ c.37.1.1 (A:) Adenylat 96.3 0.002 1.5E-07 34.0 4.1 27 175-201 2-28 (190)
96 d1rkba_ c.37.1.1 (A:) Adenylat 96.3 0.0016 1.2E-07 34.6 3.6 25 175-199 5-29 (173)
97 d1bifa1 c.37.1.7 (A:37-249) 6- 96.3 0.0033 2.4E-07 32.6 5.2 28 174-201 2-29 (213)
98 d1xjca_ c.37.1.10 (A:) Molybdo 96.2 0.0031 2.3E-07 32.8 4.9 28 175-202 2-29 (165)
99 d1ckea_ c.37.1.1 (A:) CMP kina 96.2 0.0021 1.5E-07 33.8 4.0 43 174-229 3-45 (225)
100 d1m7ga_ c.37.1.4 (A:) Adenosin 96.2 0.0063 4.6E-07 30.9 6.3 32 169-200 19-50 (208)
101 d1pgva_ c.10.1.1 (A:) Tropomod 96.2 0.0084 6.1E-07 30.1 6.8 110 546-656 8-141 (167)
102 d1ly1a_ c.37.1.1 (A:) Polynucl 96.1 0.0023 1.7E-07 33.6 3.8 24 175-198 3-26 (152)
103 d1y63a_ c.37.1.1 (A:) Probable 96.1 0.0028 2E-07 33.1 4.1 28 172-199 3-30 (174)
104 d1knqa_ c.37.1.17 (A:) Glucona 96.0 0.0036 2.6E-07 32.4 4.4 28 172-199 4-31 (171)
105 d2iyva1 c.37.1.2 (A:2-166) Shi 96.0 0.002 1.4E-07 34.0 3.0 25 176-200 3-27 (165)
106 d1szpa2 c.37.1.11 (A:145-395) 96.0 0.014 1E-06 28.7 7.4 49 173-221 33-85 (251)
107 d1qhxa_ c.37.1.3 (A:) Chloramp 96.0 0.003 2.2E-07 32.8 3.9 27 173-199 2-28 (178)
108 d1viaa_ c.37.1.2 (A:) Shikimat 96.0 0.0027 1.9E-07 33.2 3.6 24 177-200 3-26 (161)
109 d1teva_ c.37.1.1 (A:) UMP/CMP 95.9 0.0038 2.8E-07 32.2 4.1 26 174-199 1-26 (194)
110 d1odfa_ c.37.1.6 (A:) Hypothet 95.9 0.028 2E-06 26.9 9.7 79 174-252 27-113 (286)
111 d2afhe1 c.37.1.10 (E:1-289) Ni 95.9 0.0091 6.6E-07 29.9 6.0 40 175-216 3-42 (289)
112 d1q3ta_ c.37.1.1 (A:) CMP kina 95.9 0.0036 2.6E-07 32.4 3.8 43 175-230 4-46 (223)
113 d1e6ca_ c.37.1.2 (A:) Shikimat 95.9 0.0029 2.1E-07 33.0 3.3 26 175-200 3-28 (170)
114 d1nksa_ c.37.1.1 (A:) Adenylat 95.8 0.0049 3.6E-07 31.5 4.4 27 175-201 2-28 (194)
115 d1a7ja_ c.37.1.6 (A:) Phosphor 95.8 0.01 7.6E-07 29.5 6.0 80 172-253 2-90 (288)
116 d1um8a_ c.37.1.20 (A:) ClpX {H 95.8 0.009 6.5E-07 29.9 5.6 26 173-198 67-92 (364)
117 d1yj5a2 c.37.1.1 (A:351-522) 5 95.7 0.0047 3.4E-07 31.6 3.8 27 171-197 11-37 (172)
118 d1pzna2 c.37.1.11 (A:96-349) D 95.7 0.03 2.2E-06 26.7 7.8 49 173-221 35-87 (254)
119 d1ye8a1 c.37.1.11 (A:1-178) Hy 95.6 0.0053 3.9E-07 31.3 3.9 24 177-200 3-26 (178)
120 d1fx0a3 c.37.1.11 (A:97-372) C 95.6 0.02 1.5E-06 27.7 6.8 89 173-263 66-169 (276)
121 d1zp6a1 c.37.1.25 (A:6-181) Hy 95.6 0.0043 3.1E-07 31.9 3.3 26 173-198 3-28 (176)
122 d1uj2a_ c.37.1.6 (A:) Uridine- 95.6 0.0064 4.7E-07 30.8 4.2 28 174-201 2-29 (213)
123 d1io0a_ c.10.1.1 (A:) Tropomod 95.4 0.01 7.5E-07 29.5 4.8 12 551-562 15-26 (166)
124 d1ny5a2 c.37.1.20 (A:138-384) 95.4 0.011 8.3E-07 29.2 4.9 46 154-199 1-48 (247)
125 d1hyqa_ c.37.1.10 (A:) Cell di 95.3 0.021 1.5E-06 27.6 5.9 39 175-215 2-41 (232)
126 d1zaka1 c.37.1.1 (A:3-127,A:15 95.2 0.0077 5.6E-07 30.3 3.7 27 173-199 2-28 (189)
127 d3adka_ c.37.1.1 (A:) Adenylat 95.2 0.008 5.9E-07 30.2 3.7 27 173-199 7-33 (194)
128 d1nn5a_ c.37.1.1 (A:) Thymidyl 95.2 0.034 2.5E-06 26.3 6.9 33 173-206 2-34 (209)
129 d1svma_ c.37.1.20 (A:) Papillo 95.2 0.026 1.9E-06 27.0 6.3 30 171-200 151-180 (362)
130 d1g41a_ c.37.1.20 (A:) HslU {H 95.2 0.017 1.2E-06 28.2 5.3 71 154-229 15-106 (443)
131 d1lvga_ c.37.1.1 (A:) Guanylat 95.1 0.0071 5.2E-07 30.5 3.2 25 176-200 2-26 (190)
132 d1zina1 c.37.1.1 (A:1-125,A:16 95.0 0.0093 6.8E-07 29.8 3.6 24 176-199 2-25 (182)
133 d1gsia_ c.37.1.1 (A:) Thymidyl 95.0 0.049 3.6E-06 25.3 7.1 32 176-208 2-33 (208)
134 d1ak2a1 c.37.1.1 (A:14-146,A:1 94.9 0.014 1E-06 28.7 4.2 26 173-199 3-28 (190)
135 d1gkya_ c.37.1.1 (A:) Guanylat 94.9 0.009 6.6E-07 29.9 3.2 26 175-200 2-27 (186)
136 d1tmka_ c.37.1.1 (A:) Thymidyl 94.8 0.043 3.1E-06 25.6 6.5 29 172-200 1-29 (214)
137 d1yrba1 c.37.1.10 (A:1-244) AT 94.8 0.016 1.2E-06 28.3 4.2 25 176-200 2-26 (244)
138 d2cdna1 c.37.1.1 (A:1-181) Ade 94.8 0.012 8.7E-07 29.1 3.6 24 176-199 2-25 (181)
139 d1s3ga1 c.37.1.1 (A:1-125,A:16 94.8 0.012 8.9E-07 29.1 3.6 24 176-199 2-25 (182)
140 d1znwa1 c.37.1.1 (A:20-201) Gu 94.8 0.013 9.3E-07 28.9 3.7 25 175-199 3-27 (182)
141 d1g3qa_ c.37.1.10 (A:) Cell di 94.7 0.046 3.4E-06 25.5 6.5 38 174-213 2-40 (237)
142 d2ocpa1 c.37.1.1 (A:37-277) De 94.7 0.014 9.9E-07 28.8 3.7 27 173-199 1-27 (241)
143 d2jdia3 c.37.1.11 (A:95-379) C 94.7 0.068 4.9E-06 24.4 9.5 100 165-264 58-179 (285)
144 d2ak3a1 c.37.1.1 (A:0-124,A:16 94.6 0.017 1.2E-06 28.2 4.0 26 174-199 6-31 (189)
145 d4tmka_ c.37.1.1 (A:) Thymidyl 94.4 0.076 5.6E-06 24.1 7.4 37 174-211 2-38 (210)
146 d1akya1 c.37.1.1 (A:3-130,A:16 94.4 0.016 1.2E-06 28.3 3.6 24 176-199 4-27 (180)
147 d1kgda_ c.37.1.1 (A:) Guanylat 94.3 0.018 1.3E-06 28.0 3.6 26 174-199 3-28 (178)
148 d1uf9a_ c.37.1.1 (A:) Dephosph 94.2 0.02 1.5E-06 27.7 3.7 23 173-195 2-24 (191)
149 d1e4va1 c.37.1.1 (A:1-121,A:15 94.2 0.019 1.4E-06 27.9 3.6 24 176-199 2-25 (179)
150 d1s96a_ c.37.1.1 (A:) Guanylat 94.1 0.024 1.8E-06 27.2 3.9 26 174-199 2-27 (205)
151 d1v5wa_ c.37.1.11 (A:) Meiotic 94.1 0.09 6.6E-06 23.6 8.6 49 173-221 36-88 (258)
152 d2i1qa2 c.37.1.11 (A:65-322) D 94.1 0.088 6.4E-06 23.7 6.7 56 173-229 33-102 (258)
153 d1htwa_ c.37.1.18 (A:) Hypothe 94.0 0.072 5.3E-06 24.2 6.2 31 172-202 31-61 (158)
154 d1w36d1 c.37.1.19 (D:2-360) Ex 94.0 0.07 5.1E-06 24.3 6.1 131 159-295 151-302 (359)
155 d2vp4a1 c.37.1.1 (A:12-208) De 93.7 0.012 9E-07 29.0 1.8 27 172-198 7-33 (197)
156 d1byia_ c.37.1.10 (A:) Dethiob 93.2 0.055 4E-06 25.0 4.4 28 175-202 2-30 (224)
157 d1p5zb_ c.37.1.1 (B:) Deoxycyt 93.1 0.015 1.1E-06 28.4 1.5 26 174-199 2-27 (241)
158 d1tf7a1 c.37.1.11 (A:14-255) C 92.9 0.14 1E-05 22.4 8.0 41 173-214 25-65 (242)
159 d1r0wa_ c.37.1.12 (A:) Cystic 92.7 0.05 3.7E-06 25.2 3.7 28 172-199 60-87 (281)
160 d3b60a1 c.37.1.12 (A:329-581) 92.7 0.047 3.4E-06 25.4 3.5 27 172-198 39-65 (253)
161 d1nlfa_ c.37.1.11 (A:) Hexamer 92.6 0.07 5.1E-06 24.3 4.3 51 174-226 29-87 (274)
162 d1nija1 c.37.1.10 (A:2-223) Hy 92.5 0.045 3.3E-06 25.5 3.2 26 172-197 1-26 (222)
163 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.4 0.053 3.8E-06 25.1 3.4 22 177-198 3-24 (160)
164 d1deka_ c.37.1.1 (A:) Deoxynuc 92.4 0.064 4.6E-06 24.6 3.8 24 175-198 2-25 (241)
165 d1vhta_ c.37.1.1 (A:) Dephosph 92.4 0.055 4E-06 25.0 3.5 20 176-195 5-24 (208)
166 d1mv5a_ c.37.1.12 (A:) Multidr 92.3 0.061 4.4E-06 24.7 3.7 27 172-198 26-52 (242)
167 d1jj7a_ c.37.1.12 (A:) Peptide 92.3 0.057 4.2E-06 24.9 3.5 27 172-198 38-64 (251)
168 d2pmka1 c.37.1.12 (A:467-707) 92.3 0.054 3.9E-06 25.0 3.4 26 173-198 28-53 (241)
169 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 92.3 0.081 5.9E-06 23.9 4.3 32 165-196 3-35 (186)
170 d1l2ta_ c.37.1.12 (A:) MJ0796 92.2 0.05 3.7E-06 25.2 3.2 37 172-211 29-65 (230)
171 d1g2912 c.37.1.12 (1:1-240) Ma 92.2 0.061 4.4E-06 24.7 3.5 26 173-198 28-53 (240)
172 d3dhwc1 c.37.1.12 (C:1-240) Me 92.2 0.052 3.8E-06 25.2 3.2 28 172-199 29-56 (240)
173 d1svia_ c.37.1.8 (A:) Probable 92.1 0.064 4.7E-06 24.6 3.6 25 172-196 21-45 (195)
174 d1svsa1 c.37.1.8 (A:32-60,A:18 92.1 0.064 4.7E-06 24.6 3.6 24 176-199 4-27 (195)
175 d1n0wa_ c.37.1.11 (A:) DNA rep 92.1 0.18 1.3E-05 21.7 7.8 49 173-221 22-74 (242)
176 d2awna2 c.37.1.12 (A:4-235) Ma 92.1 0.068 4.9E-06 24.4 3.7 37 172-211 24-60 (232)
177 d2a5ja1 c.37.1.8 (A:9-181) Rab 92.0 0.057 4.2E-06 24.9 3.3 21 177-197 6-26 (173)
178 d1b0ua_ c.37.1.12 (A:) ATP-bin 92.0 0.055 4E-06 25.0 3.2 36 172-210 26-61 (258)
179 d1z0fa1 c.37.1.8 (A:8-173) Rab 92.0 0.058 4.2E-06 24.8 3.3 23 176-198 6-28 (166)
180 d1z06a1 c.37.1.8 (A:32-196) Ra 91.9 0.06 4.4E-06 24.7 3.2 22 177-198 5-26 (165)
181 d1jjva_ c.37.1.1 (A:) Dephosph 91.9 0.059 4.3E-06 24.8 3.2 21 175-195 3-23 (205)
182 d1z2aa1 c.37.1.8 (A:8-171) Rab 91.8 0.064 4.7E-06 24.6 3.3 21 177-197 5-25 (164)
183 d1v43a3 c.37.1.12 (A:7-245) Hy 91.8 0.077 5.6E-06 24.1 3.7 27 172-198 30-56 (239)
184 d1upta_ c.37.1.8 (A:) ADP-ribo 91.6 0.068 4.9E-06 24.4 3.3 23 176-198 7-29 (169)
185 d1z08a1 c.37.1.8 (A:17-183) Ra 91.6 0.069 5E-06 24.4 3.2 22 176-197 5-26 (167)
186 d1yzqa1 c.37.1.8 (A:14-177) Ra 91.5 0.069 5E-06 24.4 3.2 22 177-198 3-24 (164)
187 d2fn4a1 c.37.1.8 (A:24-196) r- 91.5 0.069 5E-06 24.4 3.2 23 176-198 8-30 (173)
188 d1r2qa_ c.37.1.8 (A:) Rab5a {H 91.5 0.071 5.2E-06 24.3 3.3 23 176-198 8-30 (170)
189 d1z0ja1 c.37.1.8 (A:2-168) Rab 91.4 0.072 5.2E-06 24.3 3.2 23 176-198 6-28 (167)
190 d1kaoa_ c.37.1.8 (A:) Rap2a {H 91.3 0.075 5.5E-06 24.1 3.2 23 176-198 5-27 (167)
191 d1nrjb_ c.37.1.8 (B:) Signal r 91.3 0.085 6.2E-06 23.8 3.5 24 174-197 3-26 (209)
192 d2atva1 c.37.1.8 (A:5-172) Ras 91.3 0.076 5.5E-06 24.1 3.2 22 177-198 5-26 (168)
193 d2ew1a1 c.37.1.8 (A:4-174) Rab 91.3 0.076 5.5E-06 24.1 3.2 23 176-198 7-29 (171)
194 d3raba_ c.37.1.8 (A:) Rab3a {R 91.2 0.078 5.7E-06 24.0 3.3 21 177-197 8-28 (169)
195 d2onka1 c.37.1.12 (A:1-240) Mo 91.2 0.081 5.9E-06 23.9 3.3 33 175-210 25-57 (240)
196 d1c1ya_ c.37.1.8 (A:) Rap1A {H 91.2 0.08 5.8E-06 24.0 3.3 22 177-198 6-27 (167)
197 d2erxa1 c.37.1.8 (A:6-176) di- 91.2 0.063 4.6E-06 24.6 2.7 21 177-197 5-25 (171)
198 d2bcgy1 c.37.1.8 (Y:3-196) GTP 91.2 0.08 5.8E-06 24.0 3.2 23 176-198 8-30 (194)
199 d2f7sa1 c.37.1.8 (A:5-190) Rab 91.1 0.076 5.5E-06 24.1 3.1 22 176-197 7-28 (186)
200 d2bmea1 c.37.1.8 (A:6-179) Rab 91.1 0.083 6E-06 23.9 3.2 23 176-198 7-29 (174)
201 d1mh1a_ c.37.1.8 (A:) Rac {Hum 91.0 0.084 6.1E-06 23.8 3.3 22 176-197 7-28 (183)
202 d1ky3a_ c.37.1.8 (A:) Rab-rela 91.0 0.084 6.1E-06 23.8 3.2 22 176-197 4-25 (175)
203 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 91.0 0.085 6.2E-06 23.8 3.2 23 176-198 4-26 (177)
204 d1xtqa1 c.37.1.8 (A:3-169) GTP 91.0 0.085 6.2E-06 23.8 3.2 24 174-197 4-27 (167)
205 d2erya1 c.37.1.8 (A:10-180) r- 90.9 0.085 6.2E-06 23.8 3.2 23 176-198 7-29 (171)
206 d1sgwa_ c.37.1.12 (A:) Putativ 90.8 0.062 4.5E-06 24.7 2.4 26 173-198 26-51 (200)
207 d2f9la1 c.37.1.8 (A:8-182) Rab 90.8 0.091 6.6E-06 23.6 3.3 22 176-197 6-27 (175)
208 d2atxa1 c.37.1.8 (A:9-193) Rho 90.8 0.09 6.6E-06 23.6 3.2 23 176-198 11-33 (185)
209 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 90.8 0.092 6.7E-06 23.6 3.3 23 176-198 5-27 (170)
210 d2gjsa1 c.37.1.8 (A:91-258) Ra 90.8 0.073 5.3E-06 24.2 2.7 21 177-197 4-24 (168)
211 d2fh5b1 c.37.1.8 (B:63-269) Si 90.8 0.1 7.5E-06 23.3 3.5 24 175-198 1-24 (207)
212 d1g16a_ c.37.1.8 (A:) Rab-rela 90.7 0.092 6.7E-06 23.6 3.2 22 176-197 4-25 (166)
213 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 90.7 0.099 7.2E-06 23.4 3.4 22 176-197 4-25 (200)
214 d2g6ba1 c.37.1.8 (A:58-227) Ra 90.7 0.094 6.8E-06 23.5 3.3 23 176-198 8-30 (170)
215 d3d31a2 c.37.1.12 (A:1-229) Su 90.6 0.076 5.6E-06 24.1 2.7 27 172-198 24-50 (229)
216 d2ngra_ c.37.1.8 (A:) CDC42 {H 90.6 0.096 7E-06 23.5 3.2 22 177-198 6-27 (191)
217 d1zcba2 c.37.1.8 (A:47-75,A:20 90.6 0.084 6.1E-06 23.8 2.9 20 176-195 4-23 (200)
218 d1ctqa_ c.37.1.8 (A:) cH-p21 R 90.5 0.098 7.2E-06 23.4 3.2 23 176-198 5-27 (166)
219 d1ksha_ c.37.1.8 (A:) ADP-ribo 90.5 0.087 6.4E-06 23.7 2.9 22 176-197 4-25 (165)
220 d1azta2 c.37.1.8 (A:35-65,A:20 90.4 0.12 8.7E-06 22.9 3.6 23 175-197 7-29 (221)
221 d1m7ba_ c.37.1.8 (A:) RhoE (RN 90.3 0.1 7.6E-06 23.2 3.2 23 176-198 4-26 (179)
222 d1p6xa_ c.37.1.1 (A:) Thymidin 90.3 0.089 6.5E-06 23.7 2.8 28 174-201 6-33 (333)
223 d2hyda1 c.37.1.12 (A:324-578) 90.2 0.084 6.1E-06 23.8 2.7 26 172-197 42-67 (255)
224 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 90.2 0.11 8E-06 23.1 3.2 21 177-197 5-25 (184)
225 d1cr2a_ c.37.1.11 (A:) Gene 4 90.2 0.28 2E-05 20.6 11.1 87 173-263 34-128 (277)
226 d1fzqa_ c.37.1.8 (A:) ADP-ribo 90.1 0.096 7E-06 23.5 2.9 22 175-196 17-38 (176)
227 d1u0la2 c.37.1.8 (A:69-293) Pr 90.0 0.22 1.6E-05 21.2 4.7 33 162-197 86-118 (225)
228 d1pjra1 c.37.1.19 (A:1-318) DE 90.0 0.21 1.5E-05 21.4 4.5 51 160-214 14-66 (318)
229 d1u8za_ c.37.1.8 (A:) Ras-rela 89.9 0.12 8.8E-06 22.9 3.3 24 175-198 5-28 (168)
230 d2g3ya1 c.37.1.8 (A:73-244) GT 89.8 0.11 8.3E-06 23.0 3.1 22 176-197 5-26 (172)
231 d1wmsa_ c.37.1.8 (A:) Rab9a {H 89.7 0.13 9.4E-06 22.7 3.2 21 177-197 9-29 (174)
232 d1wf3a1 c.37.1.8 (A:3-180) GTP 89.6 0.15 1.1E-05 22.3 3.5 24 174-197 5-28 (178)
233 d1oxxk2 c.37.1.12 (K:1-242) Gl 89.6 0.077 5.6E-06 24.1 2.1 27 172-198 29-55 (242)
234 d1x1ra1 c.37.1.8 (A:10-178) Ra 89.5 0.13 9.7E-06 22.6 3.2 23 176-198 6-28 (169)
235 d1x3sa1 c.37.1.8 (A:2-178) Rab 89.5 0.14 9.9E-06 22.5 3.3 22 177-198 10-31 (177)
236 d2bmja1 c.37.1.8 (A:66-240) Ce 89.5 0.14 1E-05 22.5 3.3 23 176-198 7-29 (175)
237 d1mkya1 c.37.1.8 (A:2-172) Pro 89.4 0.14 1E-05 22.4 3.3 22 176-197 2-23 (171)
238 d1zj6a1 c.37.1.8 (A:2-178) ADP 89.4 0.19 1.4E-05 21.6 4.0 34 163-197 5-38 (177)
239 d1vpla_ c.37.1.12 (A:) Putativ 89.1 0.14 1.1E-05 22.4 3.2 27 172-198 26-52 (238)
240 d1zd9a1 c.37.1.8 (A:18-181) AD 89.1 0.15 1.1E-05 22.2 3.3 23 176-198 4-26 (164)
241 d1g6ha_ c.37.1.12 (A:) MJ1267 89.0 0.13 9.1E-06 22.7 2.8 27 173-199 29-55 (254)
242 d2qtvb1 c.37.1.8 (B:24-189) SA 89.0 0.17 1.2E-05 21.9 3.5 22 176-197 2-23 (166)
243 d1ji0a_ c.37.1.12 (A:) Branche 88.8 0.15 1.1E-05 22.3 3.0 35 173-210 31-65 (240)
244 d1e0sa_ c.37.1.8 (A:) ADP-ribo 88.7 0.23 1.7E-05 21.1 4.0 31 167-197 5-35 (173)
245 d1uaaa1 c.37.1.19 (A:2-307) DE 88.5 0.21 1.5E-05 21.4 3.7 39 175-213 15-55 (306)
246 d2bv3a2 c.37.1.8 (A:7-282) Elo 88.5 0.22 1.6E-05 21.3 3.7 28 173-200 5-32 (276)
247 d1i2ma_ c.37.1.8 (A:) Ran {Hum 88.0 0.079 5.8E-06 24.0 1.2 23 176-198 5-27 (170)
248 d1egaa1 c.37.1.8 (A:4-182) GTP 87.9 0.17 1.3E-05 21.9 2.9 24 174-197 5-28 (179)
249 d1osna_ c.37.1.1 (A:) Thymidin 87.9 0.14 9.9E-06 22.5 2.4 26 175-200 6-31 (331)
250 d1moza_ c.37.1.8 (A:) ADP-ribo 87.5 0.12 9.1E-06 22.8 2.0 24 173-196 16-39 (182)
251 d1udxa2 c.37.1.8 (A:157-336) O 87.4 0.13 9.2E-06 22.7 2.0 21 176-196 3-23 (180)
252 d1g6oa_ c.37.1.11 (A:) Hexamer 87.1 0.34 2.5E-05 20.0 4.1 24 175-198 167-190 (323)
253 d2fu5c1 c.37.1.8 (C:3-175) Rab 87.1 0.11 8.2E-06 23.0 1.6 21 177-197 9-29 (173)
254 d1lnza2 c.37.1.8 (A:158-342) O 87.0 0.15 1.1E-05 22.2 2.2 22 175-196 2-23 (185)
255 d1l7vc_ c.37.1.12 (C:) ABC tra 86.9 0.16 1.1E-05 22.1 2.2 24 173-196 24-47 (231)
256 d1e2ka_ c.37.1.1 (A:) Thymidin 86.7 0.17 1.2E-05 21.9 2.3 26 174-199 4-29 (329)
257 d1tuea_ c.37.1.20 (A:) Replica 86.5 0.44 3.2E-05 19.3 4.4 40 160-199 38-78 (205)
258 d2dy1a2 c.37.1.8 (A:8-274) Elo 86.4 0.33 2.4E-05 20.1 3.6 26 174-199 2-27 (267)
259 d1p9ra_ c.37.1.11 (A:) Extrace 86.2 0.5 3.6E-05 19.0 5.6 42 157-199 141-183 (401)
260 d2cxxa1 c.37.1.8 (A:2-185) GTP 85.8 0.27 2E-05 20.7 3.0 22 176-197 2-23 (184)
261 d2gj8a1 c.37.1.8 (A:216-376) P 85.7 0.29 2.1E-05 20.5 3.1 22 176-197 3-24 (161)
262 d1kkma_ c.91.1.2 (A:) HPr kina 85.6 0.33 2.4E-05 20.2 3.3 24 174-197 14-37 (176)
263 d1puia_ c.37.1.8 (A:) Probable 85.6 0.19 1.4E-05 21.6 2.1 25 172-196 14-38 (188)
264 d1mkya2 c.37.1.8 (A:173-358) P 84.8 0.34 2.5E-05 20.0 3.1 22 176-197 10-31 (186)
265 d1g7sa4 c.37.1.8 (A:1-227) Ini 84.5 0.46 3.4E-05 19.2 3.7 27 173-199 4-30 (227)
266 d1f5na2 c.37.1.8 (A:7-283) Int 84.4 0.55 4E-05 18.7 4.0 27 171-197 29-55 (277)
267 d1ko7a2 c.91.1.2 (A:130-298) H 83.6 0.38 2.7E-05 19.8 2.9 25 173-197 14-38 (169)
268 d1knxa2 c.91.1.2 (A:133-309) H 83.1 0.42 3E-05 19.5 3.0 24 174-197 15-38 (177)
269 d1h65a_ c.37.1.8 (A:) Chloropl 82.9 0.7 5.1E-05 18.1 5.6 38 160-197 16-55 (257)
270 g1f2t.1 c.37.1.12 (A:,B:) Rad5 82.3 0.67 4.9E-05 18.2 3.8 26 173-198 22-47 (292)
271 d1n0ua2 c.37.1.8 (A:3-343) Elo 81.0 0.82 6E-05 17.7 4.0 36 162-199 7-42 (341)
272 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 79.9 0.89 6.5E-05 17.4 4.8 38 175-212 25-64 (623)
273 d1tq4a_ c.37.1.8 (A:) Interfer 78.8 0.96 7E-05 17.2 5.0 24 173-196 55-78 (400)
274 d1xzpa2 c.37.1.8 (A:212-371) T 77.7 0.24 1.7E-05 21.0 0.2 23 176-198 2-24 (160)
275 d1u0ja_ c.37.1.20 (A:) Rep 40 77.2 1.1 7.8E-05 16.9 5.8 38 161-198 89-128 (267)
276 d1wb9a2 c.37.1.12 (A:567-800) 76.9 1.1 8E-05 16.9 6.7 163 172-353 39-224 (234)
277 d1wb1a4 c.37.1.8 (A:1-179) Elo 74.4 1.1 7.9E-05 16.9 2.9 21 176-196 7-27 (179)
278 d1t9ha2 c.37.1.8 (A:68-298) Pr 74.1 0.46 3.3E-05 19.2 0.9 24 175-198 98-121 (231)
279 d1e9ra_ c.37.1.11 (A:) Bacteri 68.4 1.7 0.00013 15.6 4.1 26 175-200 51-76 (433)
280 d1w36b1 c.37.1.19 (B:1-485) Ex 68.2 1.7 0.00013 15.6 3.4 28 171-198 13-41 (485)
281 d1jala1 c.37.1.8 (A:1-278) Ych 67.9 1.7 0.00012 15.7 2.6 22 176-197 4-25 (278)
282 g1xew.1 c.37.1.12 (X:,Y:) Smc 67.1 1.8 0.00013 15.5 3.0 25 174-198 26-50 (329)
283 d2c78a3 c.37.1.8 (A:9-212) Elo 67.0 1.8 0.00013 15.5 4.0 25 176-200 5-29 (204)
284 d1a1va1 c.37.1.14 (A:190-325) 62.9 2.2 0.00016 15.0 4.5 51 173-229 7-57 (136)
285 g1ii8.1 c.37.1.12 (A:,B:) Rad5 62.0 2.3 0.00017 14.9 3.8 26 173-198 22-47 (369)
286 d1ni3a1 c.37.1.8 (A:11-306) Yc 61.3 2.4 0.00017 14.8 2.8 24 175-198 11-34 (296)
287 d1d0xa2 c.37.1.9 (A:2-33,A:80- 60.7 2.4 0.00018 14.7 5.6 37 164-200 115-151 (712)
288 d1lkxa_ c.37.1.9 (A:) Myosin S 60.0 2.5 0.00018 14.6 5.6 37 164-200 76-112 (684)
289 d1wxqa1 c.37.1.8 (A:1-319) GTP 59.8 2.5 0.00018 14.6 2.9 23 176-198 2-24 (319)
290 d1br2a2 c.37.1.9 (A:80-789) My 58.1 2.7 0.00019 14.4 5.6 37 164-200 81-117 (710)
291 d2olra1 c.91.1.1 (A:228-540) P 58.1 2.7 0.0002 14.4 3.1 19 174-192 14-32 (313)
292 d1j3ba1 c.91.1.1 (A:212-529) P 55.6 2.9 0.00021 14.2 2.8 20 174-193 14-33 (318)
293 d1kk8a2 c.37.1.9 (A:1-28,A:77- 55.2 3 0.00022 14.1 5.3 38 163-200 110-147 (789)
294 d2mysa2 c.37.1.9 (A:4-33,A:80- 53.9 3.1 0.00023 14.0 5.6 46 153-200 104-149 (794)
295 d2eyqa3 c.37.1.19 (A:546-778) 50.6 3.5 0.00026 13.7 10.2 69 157-228 59-127 (233)
296 d1ii2a1 c.91.1.1 (A:201-523) P 49.9 3.6 0.00026 13.6 3.0 18 175-192 15-32 (323)
297 d1w7ja2 c.37.1.9 (A:63-792) My 48.0 3.9 0.00028 13.4 5.6 37 164-200 84-120 (730)
298 d1jnya3 c.37.1.8 (A:4-227) Elo 43.0 4.6 0.00034 13.0 3.4 24 176-199 5-28 (224)
299 d1yksa1 c.37.1.14 (A:185-324) 42.7 4.7 0.00034 12.9 3.6 39 173-212 6-44 (140)
300 d1w1wa_ c.37.1.12 (A:) Smc hea 41.7 4.9 0.00035 12.8 3.6 25 174-198 25-49 (427)
301 d1qhla_ c.37.1.12 (A:) Cell di 41.3 2.3 0.00017 14.9 -0.3 25 175-199 25-49 (222)
302 d1d2ea3 c.37.1.8 (A:55-250) El 40.9 5 0.00036 12.7 3.3 22 176-197 5-26 (196)
303 d2p6ra3 c.37.1.19 (A:1-202) He 39.8 5.2 0.00038 12.6 4.3 36 175-212 41-76 (202)
304 d1zunb3 c.37.1.8 (B:16-237) Su 38.7 5.4 0.00039 12.5 3.4 25 175-199 10-34 (222)
305 d1e69a_ c.37.1.12 (A:) Smc hea 36.5 5.9 0.00043 12.3 2.7 23 174-196 24-46 (308)
306 d1r5ba3 c.37.1.8 (A:215-459) E 36.2 5.9 0.00043 12.3 2.5 26 173-198 22-48 (245)
307 d1kk1a3 c.37.1.8 (A:6-200) Ini 31.9 7 0.00051 11.9 2.9 21 176-196 7-27 (195)
308 d2fz4a1 c.37.1.19 (A:24-229) D 30.9 7.2 0.00053 11.7 6.9 42 154-198 68-109 (206)
309 d2qn6a3 c.37.1.8 (A:2-206) Ini 30.8 7.2 0.00053 11.7 2.9 21 176-196 10-30 (205)
310 d1gm5a3 c.37.1.19 (A:286-549) 30.6 7.3 0.00053 11.7 8.9 69 158-229 88-156 (264)
311 d1f60a3 c.37.1.8 (A:2-240) Elo 30.1 7.4 0.00054 11.7 3.4 24 176-199 8-31 (239)
312 d1puja_ c.37.1.8 (A:) Probable 29.8 7.5 0.00055 11.6 5.5 25 173-197 111-135 (273)
313 d1wp9a1 c.37.1.19 (A:1-200) pu 29.5 7.6 0.00056 11.6 6.3 50 157-211 10-59 (200)
314 d1g8fa3 c.37.1.15 (A:390-511) 25.7 8.9 0.00065 11.2 3.3 25 175-199 7-31 (122)
315 d1c9ka_ c.37.1.11 (A:) Adenosy 25.7 8.9 0.00065 11.2 4.5 37 176-218 1-37 (180)
316 d1p3da1 c.5.1.1 (A:11-106) UDP 25.4 9 0.00066 11.1 4.0 25 173-197 7-31 (96)
No 1
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=100.00 E-value=1.3e-44 Score=291.43 Aligned_cols=242 Identities=12% Similarity=0.067 Sum_probs=193.5
Q ss_pred CCCCCCHHHHHHHHHHHHH---CCCCEEEEEECCCCCCHHHHHHHHHHHHH--HCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 6562120989999999987---19973999991899948899999999984--228998899999289999999999999
Q 000701 152 YEAFESRFSTLRDIRNALT---NANAGIIGVYGMGGIGKTTLVKAVARQAK--ERKLFDQVVFSEVSQTPNIKDIQKEIA 226 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~---~~~~~vi~I~G~~G~GKTtLa~~~~~~~~--~~~~f~~~~wv~~~~~~~~~~~~~~i~ 226 (1344)
...++||+.++++|+++|. +.+.++|+|+||||+||||||+++|++.. .+.+|++++|++++..++...+...+.
T Consensus 19 ~~~~~gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~~~~l~~~~~ 98 (277)
T d2a5yb3 19 QMTCYIREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTD 98 (277)
T ss_dssp CCCSCCCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCSTTHHHHHHHH
T ss_pred CCCEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
T ss_conf 88623739999999999873468784089997799788899999999855655401276489999368777778999999
Q ss_pred HHH---CCCCC-------CCCHHHHHH-HHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHH
Q ss_conf 995---35445-------331799999-9999998398199999299985320112676789998238999825867887
Q 000701 227 EKL---GLILH-------EETVSRRAS-RLYERLKEEKKILVVLDNLWKCLNLETVGIPYGDDHKGCKILLTSRDRSVLL 295 (1344)
Q Consensus 227 ~~l---~~~~~-------~~~~~~~~~-~l~~~l~~~~~~LlVlDdv~~~~~~~~l~~~l~~~~~~~~iivTtR~~~v~~ 295 (1344)
..+ +.... ......... .+.+.+ .++++|+|+||+|+...|+.+. ..+++||||||+..++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~~kr~LlVLDDv~~~~~~~~~~------~~~srilvTTR~~~v~~ 171 (277)
T d2a5yb3 99 ILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALI-DRPNTLFVFDDVVQEETIRWAQ------ELRLRCLVTTRDVEISN 171 (277)
T ss_dssp HHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHT-TSTTEEEEEEEECCHHHHHHHH------HTTCEEEEEESBGGGGG
T ss_pred HHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHH-CCCCEEEECCHHHHHHHHHHHC------CCCCEEEEEEEHHHHHH
T ss_conf 9998722022027863212336999999999984-4688167525066776655520------45755999964489998
Q ss_pred HHCCC-CCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 30999-94984699999999999998199988830399999999992998599999999994199999999999861999
Q 000701 296 KMGSA-PPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIALTTIARALRNRSMREWKNALQQLRAPS 374 (1344)
Q Consensus 296 ~~~~~-~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPlai~~~~~~l~~~~~~~w~~~~~~l~~~~ 374 (1344)
.+... ..|++++|+.+|||+||.++++.....+..++++++|+++|+|+|||++++|+.++.++..+|.+..+.+.+..
T Consensus 172 ~~~~~~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~GlPLAl~~ig~~l~~k~~~~~~~~~~~L~~~~ 251 (277)
T d2a5yb3 172 AASQTCEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKSCEPKTFEKMAQLNNKLESRG 251 (277)
T ss_dssp GCCSCEEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTTCHHHHHHHHTTCCSSSHHHHHHHHHHHHHHC
T ss_pred HCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
T ss_conf 63788716877889979999999998477667425679999999995899899999999865598999999999973486
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf 9986664287999999987058980279999831
Q 000701 375 SVNFEGISAEAYSAIDLSIKYLRGDKLRKILLLC 408 (1344)
Q Consensus 375 ~~~~~~~~~~i~~~l~~sy~~L~~~~~k~c~~~~ 408 (1344)
..++..++.+||++||+ ++|.||.++
T Consensus 252 -------~~~v~~il~~sY~~L~~-~lk~c~~~l 277 (277)
T d2a5yb3 252 -------LVGVECITPYSYKSLAM-ALQRCVEVL 277 (277)
T ss_dssp -------SSTTCCCSSSSSSSHHH-HHHHHHHTS
T ss_pred -------HHHHHHHHHHHHHCCCH-HHHHHHHHC
T ss_conf -------78899999998851269-999999739
No 2
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.93 E-value=7.6e-23 Score=155.31 Aligned_cols=79 Identities=22% Similarity=0.344 Sum_probs=41.7
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCC
Q ss_conf 39865299707988886771111577986887588777772101354345535463687855674420557454880445
Q 000701 551 EMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTD 630 (1344)
Q Consensus 551 ~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~ 630 (1344)
.+..|++|++++++|+.+ +.+..+++|++|++++|.++.++.++++.+|++|++++|.+..++. ++++++|+.|++.+
T Consensus 42 ~l~~l~~L~l~~~~I~~l-~gl~~L~nL~~L~Ls~N~l~~l~~l~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~~~~ 119 (384)
T d2omza2 42 DLDQVTTLQADRLGIKSI-DGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFN 119 (384)
T ss_dssp HHTTCCEEECCSSCCCCC-TTGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCS
T ss_pred HHCCCCEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 957878998999898776-2424589999896818817988633477110103013433322221-11233433344332
Q ss_pred C
Q ss_conf 5
Q 000701 631 C 631 (1344)
Q Consensus 631 ~ 631 (1344)
+
T Consensus 120 ~ 120 (384)
T d2omza2 120 N 120 (384)
T ss_dssp S
T ss_pred C
T ss_conf 2
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.92 E-value=3.8e-22 Score=150.92 Aligned_cols=95 Identities=24% Similarity=0.270 Sum_probs=74.4
Q ss_pred EECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCC
Q ss_conf 70798888677111157798688758877777210135434553546368785567442055745488044554323239
Q 000701 559 GFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCFQLKVIA 638 (1344)
Q Consensus 559 ~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~~ 638 (1344)
.+..+.+.... ....+.+|++|+++++.|..++.++.+++|++|++++|.++.+|. ++++++|++|++++| .+..++
T Consensus 28 ~l~~~~~~~~~-~~~~l~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~~l~~-l~~L~~L~~L~L~~n-~i~~i~ 104 (384)
T d2omza2 28 VLGKTNVTDTV-SQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNN-QIADIT 104 (384)
T ss_dssp HTTCSSTTSEE-CHHHHTTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCCCG
T ss_pred HHCCCCCCCCC-CHHHHCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCCCCC-CCCCCC
T ss_conf 86777778863-988957878998999898776242458999989681881798863-347711010301343-332222
Q ss_pred HHHHCCCCCCCEEECCCCCC
Q ss_conf 04430377687898202442
Q 000701 639 PNVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 639 ~~~l~~L~~L~~L~l~~~~~ 658 (1344)
+ ++.+++|+.|++.++..
T Consensus 105 ~--l~~l~~L~~L~~~~~~~ 122 (384)
T d2omza2 105 P--LANLTNLTGLTLFNNQI 122 (384)
T ss_dssp G--GTTCTTCCEEECCSSCC
T ss_pred C--CCCCCCCCCCCCCCCCC
T ss_conf 1--11233433344332222
No 4
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.83 E-value=2.9e-18 Score=126.71 Aligned_cols=95 Identities=19% Similarity=0.307 Sum_probs=39.7
Q ss_pred CCEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCC
Q ss_conf 65299707988886771-111577986887588777772--101354345535463687855674420557454880445
Q 000701 554 MLRVVGFSKMQLSSLPS-SMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTD 630 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~ 630 (1344)
.+++|++++|.|+.+|+ +|.++.+|++|++++|.+..+ ..|.++.+|++|++++|.++.+|..+ ...++.|++..
T Consensus 32 ~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l~~L~~~~ 109 (305)
T d1xkua_ 32 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTLQELRVHE 109 (305)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTCCEEECCS
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCH--HHHHHHHHCCC
T ss_conf 9798978499189869657604656523112344344523566527985578315687567676400--11132321024
Q ss_pred CCCCCCCCHHHHCCCCCCCEE
Q ss_conf 543232390443037768789
Q 000701 631 CFQLKVIAPNVLSSLIRLEEL 651 (1344)
Q Consensus 631 ~~~l~~~~~~~l~~L~~L~~L 651 (1344)
+ .+..++...+.....+..+
T Consensus 110 n-~l~~l~~~~~~~~~~~~~l 129 (305)
T d1xkua_ 110 N-EITKVRKSVFNGLNQMIVV 129 (305)
T ss_dssp S-CCCBBCHHHHTTCTTCCEE
T ss_pred C-CHHHHHHHHHHCCCCCCCC
T ss_conf 6-1023444454013311000
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.80 E-value=4.6e-17 Score=119.16 Aligned_cols=98 Identities=33% Similarity=0.406 Sum_probs=74.7
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCEEECCC
Q ss_conf 65299707988886771111577986887588777772--10135434553546368785567-4420557454880445
Q 000701 554 MLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRLLDLTD 630 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~l~~ 630 (1344)
.++.+|-++..++.+|..+ ..++++|++++|.++.+ ..|.++.+|++|+++++.+..++ ..|.++++|++|++++
T Consensus 11 ~~~~~~C~~~~L~~lP~~l--~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~ 88 (305)
T d1xkua_ 11 HLRVVQCSDLGLEKVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 88 (305)
T ss_dssp ETTEEECTTSCCCSCCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEECCCCCCCCCCCC--CCCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEECCCC
T ss_conf 5999985599988519888--99979897849918986965760465652311234434452356652798557831568
Q ss_pred CCCCCCCCHHHHCCCCCCCEEECCCCC
Q ss_conf 543232390443037768789820244
Q 000701 631 CFQLKVIAPNVLSSLIRLEELYMRNCF 657 (1344)
Q Consensus 631 ~~~l~~~~~~~l~~L~~L~~L~l~~~~ 657 (1344)
| .++.+|.. ....+..|.+..+.
T Consensus 89 n-~l~~l~~~---~~~~l~~L~~~~n~ 111 (305)
T d1xkua_ 89 N-QLKELPEK---MPKTLQELRVHENE 111 (305)
T ss_dssp S-CCSBCCSS---CCTTCCEEECCSSC
T ss_pred C-CCCCCCCC---HHHHHHHHHCCCCC
T ss_conf 7-56767640---01113232102461
No 6
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78 E-value=2.2e-16 Score=114.94 Aligned_cols=73 Identities=26% Similarity=0.328 Sum_probs=31.4
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCC
Q ss_conf 8652997079888867711115779868875887777721013543455354636878556744205574548804455
Q 000701 553 RMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDC 631 (1344)
Q Consensus 553 ~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~ 631 (1344)
++|++|++++|.|+.+|..+ .+|+.|++.++.+..++.+. ..|++|+++++.+..+|. ++.+++|++|++.++
T Consensus 58 ~~L~~L~Ls~N~l~~lp~~~---~~L~~L~l~~n~l~~l~~lp--~~L~~L~L~~n~l~~lp~-~~~l~~L~~L~l~~~ 130 (353)
T d1jl5a_ 58 PHLESLVASCNSLTELPELP---QSLKSLLVDNNNLKALSDLP--PLLEYLGVSNNQLEKLPE-LQNSSFLKIIDVDNN 130 (353)
T ss_dssp TTCSEEECCSSCCSSCCCCC---TTCCEEECCSSCCSCCCSCC--TTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSS
T ss_pred CCCCEEECCCCCCCCCCCCH---HHHHHHHHHHCCCCHHHHHC--CCCCCCCCCCCCCCCCCC-HHHHCCCEEECCCCC
T ss_conf 89888989999796336203---32033266551432032102--211111334554322210-011013123113565
No 7
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.78 E-value=4.7e-16 Score=112.86 Aligned_cols=94 Identities=20% Similarity=0.249 Sum_probs=56.4
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCC
Q ss_conf 65299707988886771111577986887588777772101354345535463687855674420557454880445543
Q 000701 554 MLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCFQ 633 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~~ 633 (1344)
.+++|||+++.++.+|+. +.+|++|++++|.+..++.. +.+|+.|++.++.+..++.- ...|++|++++| .
T Consensus 39 ~l~~LdLs~~~L~~lp~~---~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~~n~l~~l~~l---p~~L~~L~L~~n-~ 109 (353)
T d1jl5a_ 39 QAHELELNNLGLSSLPEL---PPHLESLVASCNSLTELPEL--PQSLKSLLVDNNNLKALSDL---PPLLEYLGVSNN-Q 109 (353)
T ss_dssp TCSEEECTTSCCSCCCSC---CTTCSEEECCSSCCSSCCCC--CTTCCEEECCSSCCSCCCSC---CTTCCEEECCSS-C
T ss_pred CCCEEEECCCCCCCCCCC---CCCCCEEECCCCCCCCCCCC--HHHHHHHHHHHCCCCHHHHH---CCCCCCCCCCCC-C
T ss_conf 998999379998878898---78988898999979633620--33203326655143203210---221111133455-4
Q ss_pred CCCCCHHHHCCCCCCCEEECCCCCC
Q ss_conf 2323904430377687898202442
Q 000701 634 LKVIAPNVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 634 l~~~~~~~l~~L~~L~~L~l~~~~~ 658 (1344)
+..+|. ++.+++|++|++.++..
T Consensus 110 l~~lp~--~~~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 110 LEKLPE--LQNSSFLKIIDVDNNSL 132 (353)
T ss_dssp CSSCCC--CTTCTTCCEEECCSSCC
T ss_pred CCCCCC--HHHHCCCEEECCCCCCC
T ss_conf 322210--01101312311356510
No 8
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.77 E-value=4.1e-18 Score=125.73 Aligned_cols=104 Identities=22% Similarity=0.260 Sum_probs=48.1
Q ss_pred CCCEEEEECCCCCC---CCCCCCCCCCCCCEEECCC-CCCC-CC-CCCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCE
Q ss_conf 86529970798888---6771111577986887588-7777-72-10135434553546368785567-44205574548
Q 000701 553 RMLRVVGFSKMQLS---SLPSSMDLLVNLQTLSLDQ-SMLG-DI-AIIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRL 625 (1344)
Q Consensus 553 ~~Lr~L~L~~~~i~---~lp~~i~~L~~L~~L~L~~-~~i~-~l-~~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~ 625 (1344)
.+++.|+|+++.+. .+|.++++|++|++|+|++ +.+. .+ ..|++|.+|++|++++|.+..++ ..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCC
T ss_conf 79889989899888888798478467533520202654333002431145420011020356434433222220111001
Q ss_pred EECCCCCCCCCCCHHHHCCCCCCCEEECCCCC
Q ss_conf 80445543232390443037768789820244
Q 000701 626 LDLTDCFQLKVIAPNVLSSLIRLEELYMRNCF 657 (1344)
Q Consensus 626 L~l~~~~~l~~~~~~~l~~L~~L~~L~l~~~~ 657 (1344)
+++..+.....+|.. ++++++++++++.++.
T Consensus 130 l~l~~N~~~~~~p~~-l~~l~~L~~l~l~~n~ 160 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPS-ISSLPNLVGITFDGNR 160 (313)
T ss_dssp EECCSSEEESCCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCCCCCCCCCCCHH-HCCCCCCCEEECCCCC
T ss_conf 111224555568512-2067400000023553
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=3.6e-17 Score=119.84 Aligned_cols=168 Identities=22% Similarity=0.260 Sum_probs=71.8
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-C
Q ss_conf 999988998899995166514689863212567788139865299707988886771111577986887588777772-1
Q 000701 514 SSIPELPEGLEYPKLEFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI-A 592 (1344)
Q Consensus 514 ~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l-~ 592 (1344)
..+..+|... .+.++.|.+.++. +..++.+.|.++++|++|++++|.++.+|. ++.+.+|++|++++|.+... .
T Consensus 20 ~~L~~iP~~l-p~~l~~L~Ls~N~---i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~-~~~l~~L~~L~Ls~N~l~~~~~ 94 (266)
T d1p9ag_ 20 RNLTALPPDL-PKDTTILHLSENL---LYTFSLATLMPYTRLTQLNLDRAELTKLQV-DGTLPVLGTLDLSHNQLQSLPL 94 (266)
T ss_dssp SCCSSCCSCC-CTTCCEEECTTSC---CSEEEGGGGTTCTTCCEEECTTSCCCEEEC-CSCCTTCCEEECCSSCCSSCCC
T ss_pred CCCCEECCCC-CCCCCEEECCCCC---CCCCCHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9988619675-7688989884992---898597786345655221356654444311-1112232111112222211111
Q ss_pred CCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCCCCEECCCCCCCCC
Q ss_conf 0135434553546368785567-442055745488044554323239044303776878982024423101244453444
Q 000701 593 IIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRLLDLTDCFQLKVIAPNVLSSLIRLEELYMRNCFVQWEVRGVNTERSC 671 (1344)
Q Consensus 593 ~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~l~~~~~l~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~ 671 (1344)
.+.++.+|++|+++++.+..++ ..+..+.+++.|++.++ .+..++...+..+.+++.+++.+|.+. .
T Consensus 95 ~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n-~l~~l~~~~~~~l~~l~~l~l~~N~l~-----------~ 162 (266)
T d1p9ag_ 95 LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN-ELKTLPPGLLTPTPKLEKLSLANNNLT-----------E 162 (266)
T ss_dssp CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS-CCCCCCTTTTTTCTTCCEEECTTSCCS-----------C
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC-CCCEECCCCCCCCCCCHHCCCCCCCCC-----------C
T ss_conf 2122222222222223110110011222211112212434-210221233322111000000015652-----------2
Q ss_pred CCHHHHCCCCCCCEEEEEECCCCCCCC
Q ss_conf 551331499999699989078988888
Q 000701 672 AGLDELMHLPRLTSLEIDIGNDDILPE 698 (1344)
Q Consensus 672 ~~l~~L~~l~~L~~L~i~~~~~~~~~~ 698 (1344)
.....+..+++|+.|+++++.+..+|.
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~~lp~ 189 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLYTIPK 189 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCH
T ss_conf 372001342124234301397855686
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.2e-17 Score=120.18 Aligned_cols=114 Identities=21% Similarity=0.292 Sum_probs=81.7
Q ss_pred CCCCCHHHHHCCCCCEEEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHC
Q ss_conf 21256778813986529970798888677-11115779868875887777721013543455354636878556744205
Q 000701 541 EINISKSFFKEMRMLRVVGFSKMQLSSLP-SSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGL 619 (1344)
Q Consensus 541 ~~~l~~~~f~~l~~Lr~L~L~~~~i~~lp-~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~ 619 (1344)
+..+|.++. +.+++|+|++|.|+.+| ..|.++.+|++|++++|.+..++.++.+.+|++|++++|.+...+..+..
T Consensus 22 L~~iP~~lp---~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 98 (266)
T d1p9ag_ 22 LTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQT 98 (266)
T ss_dssp CSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECCSCCTTCCEEECCSSCCSSCCCCTTT
T ss_pred CCEECCCCC---CCCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 886196757---68898988499289859778634565522135665444431111122321111122222111112122
Q ss_pred CCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCC
Q ss_conf 574548804455432323904430377687898202442
Q 000701 620 LTKLRLLDLTDCFQLKVIAPNVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 620 L~~L~~L~l~~~~~l~~~~~~~l~~L~~L~~L~l~~~~~ 658 (1344)
+++|+.|+++++ ....++...+..+.++++|++..+.+
T Consensus 99 l~~L~~L~l~~~-~~~~~~~~~~~~l~~l~~L~l~~n~l 136 (266)
T d1p9ag_ 99 LPALTVLDVSFN-RLTSLPLGALRGLGELQELYLKGNEL 136 (266)
T ss_dssp CTTCCEEECCSS-CCCCCCSSTTTTCTTCCEEECTTSCC
T ss_pred CCCCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 222222222223-11011001122221111221243421
No 11
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.72 E-value=1e-16 Score=117.01 Aligned_cols=132 Identities=14% Similarity=0.184 Sum_probs=103.7
Q ss_pred CCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECC-CCCC-CCCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCC
Q ss_conf 99951665146898632125677881398652997079-8888-6771111577986887588777772--101354345
Q 000701 525 YPKLEFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSK-MQLS-SLPSSMDLLVNLQTLSLDQSMLGDI--AIIGKLKNL 600 (1344)
Q Consensus 525 ~~~Lr~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~-~~i~-~lp~~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L 600 (1344)
..++..|.+.++.......+|..+ +++++|++|+|++ |.+. .+|.+|+++.+|++|++++|.+..+ ..+..+.+|
T Consensus 49 ~~~v~~L~L~~~~l~g~~~lp~~l-~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 49 TYRVNNLDLSGLNLPKPYPIPSSL-ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCCEEEEEEECCCCSSCEECCGGG-GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred CEEEEEEECCCCCCCCCCCCCHHH-HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 479889989899888888798478-4675335202026543330024311454200110203564344332222201110
Q ss_pred CEEECCCCCC-CCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCC-CEEECCCCCC
Q ss_conf 5354636878-55674420557454880445543232390443037768-7898202442
Q 000701 601 EILSMINSDI-VKLPEAFGLLTKLRLLDLTDCFQLKVIAPNVLSSLIRL-EELYMRNCFV 658 (1344)
Q Consensus 601 ~~L~l~~~~l-~~lp~~i~~L~~L~~L~l~~~~~l~~~~~~~l~~L~~L-~~L~l~~~~~ 658 (1344)
+++++..+.+ ..+|..++++++|+.++++++.....+|.. +..+.++ +.+++..+.+
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~-~~~l~~l~~~l~~~~n~l 186 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS-YGSFSKLFTSMTISRNRL 186 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG-GGCCCTTCCEEECCSSEE
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
T ss_conf 01111224555568512206740000002355335620312-144311232310224643
No 12
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=1.1e-15 Score=110.63 Aligned_cols=80 Identities=19% Similarity=0.309 Sum_probs=35.1
Q ss_pred HCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECC
Q ss_conf 13986529970798888677111157798688758877777210135434553546368785567442055745488044
Q 000701 550 KEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLT 629 (1344)
Q Consensus 550 ~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~ 629 (1344)
..++.|+.|+++++.|+.++ .+.++++|++|++++|.+..+..+.++.+|++++++++.++.++ .+..+++|+.+.+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~~l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L~~l~l~ 115 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLT 115 (227)
T ss_dssp HHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECT
T ss_pred HHCCCCCEEECCCCCCCCCH-HHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 78488689977799997664-57448888376357853202543112334320121112222222-22222222122122
Q ss_pred CC
Q ss_conf 55
Q 000701 630 DC 631 (1344)
Q Consensus 630 ~~ 631 (1344)
.+
T Consensus 116 ~~ 117 (227)
T d1h6ua2 116 ST 117 (227)
T ss_dssp TS
T ss_pred CC
T ss_conf 24
No 13
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.66 E-value=8e-15 Score=105.19 Aligned_cols=103 Identities=25% Similarity=0.383 Sum_probs=46.5
Q ss_pred CCEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCC-CCCCCC-HHHHCCCCCCEEEC
Q ss_conf 65299707988886771-111577986887588777772--10135434553546368-785567-44205574548804
Q 000701 554 MLRVVGFSKMQLSSLPS-SMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINS-DIVKLP-EAFGLLTKLRLLDL 628 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~-~l~~lp-~~i~~L~~L~~L~l 628 (1344)
.+++|+|++|.|+.+|. .|.++.+|++|+++++.+..+ ..+..+..++.+..... .+..++ ..+..+++|++|++
T Consensus 33 ~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~l 112 (284)
T d1ozna_ 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (284)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEC
T ss_conf 98889774881798797786414213000013445433211121222222222222102235446201010102778756
Q ss_pred CCCCCCCCCCHHHHCCCCCCCEEECCCCC
Q ss_conf 45543232390443037768789820244
Q 000701 629 TDCFQLKVIAPNVLSSLIRLEELYMRNCF 657 (1344)
Q Consensus 629 ~~~~~l~~~~~~~l~~L~~L~~L~l~~~~ 657 (1344)
..+ ....++...++...+|+.+++..+.
T Consensus 113 ~~n-~~~~~~~~~~~~~~~L~~l~l~~N~ 140 (284)
T d1ozna_ 113 DRC-GLQELGPGLFRGLAALQYLYLQDNA 140 (284)
T ss_dssp TTS-CCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCC-CCCCCCCCCCCHHCCCCHHHHCCCC
T ss_conf 885-4432013533200012110200143
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.8e-14 Score=102.97 Aligned_cols=141 Identities=19% Similarity=0.305 Sum_probs=64.5
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCC-CCCCCCCCCCEEECCCC-CCCC
Q ss_conf 499998899889999516651468986321256778813986529970798888677-11115779868875887-7777
Q 000701 513 DSSIPELPEGLEYPKLEFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSKMQLSSLP-SSMDLLVNLQTLSLDQS-MLGD 590 (1344)
Q Consensus 513 ~~~~~~l~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~~~i~~lp-~~i~~L~~L~~L~L~~~-~i~~ 590 (1344)
+.....+|... .+.++.|.+.++. +..+|...|.+++.|++|+++++.+..++ ..+..+..++.+....+ .+..
T Consensus 20 ~~~L~~iP~~i-p~~~~~L~Ls~N~---i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~ 95 (284)
T d1ozna_ 20 QQGLQAVPVGI-PAASQRIFLHGNR---ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 95 (284)
T ss_dssp SSCCSSCCTTC-CTTCSEEECTTSC---CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCC
T ss_pred CCCCCCCCCCC-CCCCCEEECCCCC---CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99989449788-9998889774881---7987977864142130000134454332111212222222222221022354
Q ss_pred C--CCCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCC
Q ss_conf 2--10135434553546368785567-44205574548804455432323904430377687898202442
Q 000701 591 I--AIIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRLLDLTDCFQLKVIAPNVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 591 l--~~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~l~~~~~l~~~~~~~l~~L~~L~~L~l~~~~~ 658 (1344)
+ ..+.++.+|++|+++++.+..++ ..+....+|+.+++.++ .++.++.+.+..+.+|++|++.++.+
T Consensus 96 l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N-~l~~i~~~~f~~~~~L~~L~l~~N~l 165 (284)
T d1ozna_ 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDN-ALQALPDDTFRDLGNLTHLFLHGNRI 165 (284)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCHHHCCCCCCCEEECCCCCCCCCCCCCCCHHCCCCHHHHCCC-CCCCCCHHHHCCCCCHHHCCCCCCCC
T ss_conf 46201010102778756885443201353320001211020014-31445805740434050223141765
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=1.1e-14 Score=104.34 Aligned_cols=94 Identities=22% Similarity=0.249 Sum_probs=58.9
Q ss_pred EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCC
Q ss_conf 97079888867711115779868875887777721013543455354636878556744205574548804455432323
Q 000701 558 VGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCFQLKVI 637 (1344)
Q Consensus 558 L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~ 637 (1344)
++++.+.+.++. .+..+.+|++|.+.+|.++.++.+..+++|++|++++|.+..++. +.++.+|+.+++.++ .++.+
T Consensus 24 ~~l~~~~~~d~~-~~~~l~~L~~L~l~~~~i~~l~~l~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n-~~~~i 100 (227)
T d1h6ua2 24 IAAGKSNVTDTV-TQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGN-PLKNV 100 (227)
T ss_dssp HHTTCSSTTSEE-CHHHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSC-CCSCC
T ss_pred HHHCCCCCCCCC-CHHHCCCCCEEECCCCCCCCCHHHHCCCCCCEEECCCCEEECCCC-CCCCCCCCCCCCCCC-CCCCC
T ss_conf 984888767757-987848868997779999766457448888376357853202543-112334320121112-22222
Q ss_pred CHHHHCCCCCCCEEECCCC
Q ss_conf 9044303776878982024
Q 000701 638 APNVLSSLIRLEELYMRNC 656 (1344)
Q Consensus 638 ~~~~l~~L~~L~~L~l~~~ 656 (1344)
+. ++.+++|+.+.+..+
T Consensus 101 ~~--l~~l~~L~~l~l~~~ 117 (227)
T d1h6ua2 101 SA--IAGLQSIKTLDLTST 117 (227)
T ss_dssp GG--GTTCTTCCEEECTTS
T ss_pred CC--CCCCCCCCCCCCCCC
T ss_conf 22--222222212212224
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=2.6e-14 Score=101.96 Aligned_cols=99 Identities=27% Similarity=0.363 Sum_probs=40.9
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCC
Q ss_conf 98652997079888867711115779868875887777721013543455354636878556744205574548804455
Q 000701 552 MRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDC 631 (1344)
Q Consensus 552 l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~ 631 (1344)
+..|+.|+++++.++.++. +..+.+|++|++++|.+..++.++.+++|++|++++|.+..+| .+..+++|+.|++.++
T Consensus 45 L~~L~~L~l~~~~i~~l~~-l~~l~~L~~L~L~~n~i~~l~~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~~ 122 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEHN 122 (210)
T ss_dssp HHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTTS
T ss_pred HCCCCEEECCCCCCCCCHH-HHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
T ss_conf 5484589782798887444-7648998987698960258601135862120143333321222-1212221112234565
Q ss_pred CCCCCCCHHHHCCCCCCCEEECCC
Q ss_conf 432323904430377687898202
Q 000701 632 FQLKVIAPNVLSSLIRLEELYMRN 655 (1344)
Q Consensus 632 ~~l~~~~~~~l~~L~~L~~L~l~~ 655 (1344)
....++. +..+.+++.+++..
T Consensus 123 -~~~~~~~--l~~l~~l~~l~~~~ 143 (210)
T d1h6ta2 123 -GISDING--LVHLPQLESLYLGN 143 (210)
T ss_dssp -CCCCCGG--GGGCTTCCEEECCS
T ss_pred -CCCCCCC--CCCCCCCCCCCCCC
T ss_conf -3221122--01111122211222
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.62 E-value=6.4e-15 Score=105.77 Aligned_cols=101 Identities=24% Similarity=0.368 Sum_probs=42.4
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCC
Q ss_conf 39865299707988886771111577986887588777772101354345535463687855674420557454880445
Q 000701 551 EMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTD 630 (1344)
Q Consensus 551 ~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~ 630 (1344)
.+..+++|+++++.+..++ .+..+++|++|++++|.+..+..++++.+|++|+++++.+..++. +..+++|+.|++.+
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N~l~~~~~l~~l~~L~~L~l~~n~~~~~~~-l~~l~~L~~L~l~~ 115 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFN 115 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG-GTTCTTCSEEECCS
T ss_pred HHCCCCEEECCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCC
T ss_conf 9468789989999997752-021378867575456556676401677522311112222222211-11122322211122
Q ss_pred CCCCCCCCHHHHCCCCCCCEEECCCC
Q ss_conf 54323239044303776878982024
Q 000701 631 CFQLKVIAPNVLSSLIRLEELYMRNC 656 (1344)
Q Consensus 631 ~~~l~~~~~~~l~~L~~L~~L~l~~~ 656 (1344)
+ ....++. +..+++|+.|++++|
T Consensus 116 ~-~~~~~~~--~~~l~~L~~L~l~~n 138 (199)
T d2omxa2 116 N-QITDIDP--LKNLTNLNRLELSSN 138 (199)
T ss_dssp S-CCCCCGG--GTTCTTCSEEECCSS
T ss_pred C-CCCCCCC--CCHHHHHHHHHHHHH
T ss_conf 2-2223210--001223677643111
No 18
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.61 E-value=4.2e-14 Score=100.65 Aligned_cols=79 Identities=29% Similarity=0.372 Sum_probs=26.7
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCC
Q ss_conf 39865299707988886771111577986887588777772101354345535463687855674420557454880445
Q 000701 551 EMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTD 630 (1344)
Q Consensus 551 ~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~ 630 (1344)
.+++|++|++++|.++.+| .+.++.+|+.|++.++.+..++.+..+.+|+.++++.+.+...+ .+..+++|+.+++++
T Consensus 88 ~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~~~~~~~~~l~~l~~l~~l~~~~n~l~~~~-~~~~l~~L~~l~l~~ 165 (210)
T d1h6ta2 88 NLKNLGWLFLDENKVKDLS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDIT-VLSRLTKLDTLSLED 165 (210)
T ss_dssp TCTTCCEEECCSSCCCCGG-GGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC
T ss_conf 5862120143333321222-12122211122345653221122011111222112223334543-100013321001346
Q ss_pred C
Q ss_conf 5
Q 000701 631 C 631 (1344)
Q Consensus 631 ~ 631 (1344)
|
T Consensus 166 n 166 (210)
T d1h6ta2 166 N 166 (210)
T ss_dssp S
T ss_pred C
T ss_conf 4
No 19
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.59 E-value=6.3e-14 Score=99.57 Aligned_cols=80 Identities=26% Similarity=0.300 Sum_probs=40.5
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEE
Q ss_conf 15779868875887777721013543455354636878556744205574548804455432323904430377687898
Q 000701 573 DLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCFQLKVIAPNVLSSLIRLEELY 652 (1344)
Q Consensus 573 ~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~~l~~~~~~~l~~L~~L~~L~ 652 (1344)
..+.++++|++.++.+..++.+..+++|++|++++|.+..++. ++++++|++|++++| ....++. ++.+.+|+.|+
T Consensus 37 ~~l~~l~~L~l~~~~i~~l~~l~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n-~~~~~~~--l~~l~~L~~L~ 112 (199)
T d2omxa2 37 TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNN-QIADITP--LANLTNLTGLT 112 (199)
T ss_dssp HHHTTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCCCGG--GTTCTTCSEEE
T ss_pred HHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCC-CCCCCCC--CCCCCCCCCCC
T ss_conf 7946878998999999775202137886757545655667640-167752231111222-2222211--11122322211
Q ss_pred CCCC
Q ss_conf 2024
Q 000701 653 MRNC 656 (1344)
Q Consensus 653 l~~~ 656 (1344)
+.++
T Consensus 113 l~~~ 116 (199)
T d2omxa2 113 LFNN 116 (199)
T ss_dssp CCSS
T ss_pred CCCC
T ss_conf 1222
No 20
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.53 E-value=4.8e-14 Score=100.30 Aligned_cols=200 Identities=17% Similarity=0.299 Sum_probs=117.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC-----CCCHHHH
Q ss_conf 78898656212098999999998719973999991899948899999999984228998899999289-----9999999
Q 000701 147 QSSTGYEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ-----TPNIKDI 221 (1344)
Q Consensus 147 ~~~~~~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~-----~~~~~~~ 221 (1344)
.|....+.|+||+++++++.+. ..+.+.|+|++|+|||+|++++....... ..|+.+.. ......+
T Consensus 6 ~p~~~~~~f~GR~~el~~l~~~----~~~~i~i~G~~G~GKTsLl~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~ 76 (283)
T d2fnaa2 6 SPKDNRKDFFDREKEIEKLKGL----RAPITLVLGLRRTGKSSIIKIGINELNLP-----YIYLDLRKFEERNYISYKDF 76 (283)
T ss_dssp SCCCSGGGSCCCHHHHHHHHHT----CSSEEEEEESTTSSHHHHHHHHHHHHTCC-----EEEEEGGGGTTCSCCCHHHH
T ss_pred CCCCCHHHCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCC-----EEEEEECCCCCCCCCCHHHH
T ss_conf 9999722078969999999840----59879998699982999999999977998-----69997214533332439999
Q ss_pred HHHHHHHHCCCC-----------------------C---CCCHHHHHHHHHHHHH--CCCEEEEEEECCCCCCCCC----
Q ss_conf 999999953544-----------------------5---3317999999999998--3981999992999853201----
Q 000701 222 QKEIAEKLGLIL-----------------------H---EETVSRRASRLYERLK--EEKKILVVLDNLWKCLNLE---- 269 (1344)
Q Consensus 222 ~~~i~~~l~~~~-----------------------~---~~~~~~~~~~l~~~l~--~~~~~LlVlDdv~~~~~~~---- 269 (1344)
...+........ . ..........+.+.+. .+++.++++|++.......
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~~~~~ 156 (283)
T d2fnaa2 77 LLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLRGVNL 156 (283)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHH
T ss_conf 99999975445555577777777530334344322234100134589999999876315555456640554133326999
Q ss_pred --CCCCCCCCCCCCEEEEEEECCHHHHHHH------------CCCCCEECCCCCHHHHHHHHHHHHCC-CCCCCCHHHHH
Q ss_conf --1267678999823899982586788730------------99994984699999999999998199-98883039999
Q 000701 270 --TVGIPYGDDHKGCKILLTSRDRSVLLKM------------GSAPPFLIGVLNEEEAWRLFKMTAGD-DVEHRELNSTA 334 (1344)
Q Consensus 270 --~l~~~l~~~~~~~~iivTtR~~~v~~~~------------~~~~~~~l~~l~~~e~~~lf~~~~~~-~~~~~~~~~~~ 334 (1344)
.+.... ........+++.+........ .....+.|++++.+++.+++.+.+.. ....++ .
T Consensus 157 ~~~l~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~~~~~~~~~~~~~----~ 231 (283)
T d2fnaa2 157 LPALAYAY-DNLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLRRGFQEADIDFKD----Y 231 (283)
T ss_dssp HHHHHHHH-HHCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHHHHHHHHTCCCCC----H
T ss_pred HHHHHHHH-HHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHH----H
T ss_conf 99999998-753113442035650678999975421000103410588628878899999999665456999999----9
Q ss_pred HHHHHHHCCCHHHHHHHHHHHH-CCCH
Q ss_conf 9999992998599999999994-1999
Q 000701 335 RNVAMACGGLPIALTTIARALR-NRSM 360 (1344)
Q Consensus 335 ~~i~~~~~glPlai~~~~~~l~-~~~~ 360 (1344)
.+|++.++|+|..+..++..+. ..+.
T Consensus 232 ~~i~~~~~G~P~~L~~~~~~~~~~~~~ 258 (283)
T d2fnaa2 232 EVVYEKIGGIPGWLTYFGFIYLDNKNL 258 (283)
T ss_dssp HHHHHHHCSCHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHCCCH
T ss_conf 999999699799999999999805657
No 21
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50 E-value=3.7e-15 Score=107.29 Aligned_cols=250 Identities=16% Similarity=0.154 Sum_probs=0.0
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHC
Q ss_conf 61002546555433576544578986635751389832112335789987677212124566641011102201766603
Q 000701 984 TSLRLLRLPELRCLYPRMHISKWPSLKTLQVCSCDKMKTFASELSSSGGNIDSNQLRISMQQPLFFEEKIFTNLEEVALS 1063 (1344)
Q Consensus 984 ~~L~l~~~~~L~~l~~~~~~~~l~~L~~L~l~~c~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 1063 (1344)
.......++....-...........|++|++++|...... +......+++|++|+++
T Consensus 23 ~~~~~lrl~~~~~~~~~~~~~~~~~L~~LdLs~~~i~~~~-----------------------l~~l~~~c~~L~~L~L~ 79 (284)
T d2astb2 23 QGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST-----------------------LHGILSQCSKLQNLSLE 79 (284)
T ss_dssp TTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHH-----------------------HHHHHTTBCCCSEEECT
T ss_pred CCCEEEECCCCCCCCCHHHHCCCCCCCEEECCCCCCCHHH-----------------------HHHHHHHCCCCCCCCCC
T ss_conf 5542746523334552244256787887889898457779-----------------------99999748776514523
Q ss_pred CCCHHCCCCCCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHCCCCCEEEEE-CCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 21211002468786647785299999-1984644435589643896359999-073216724787433344432233323
Q 000701 1064 RKDIMLILQGNFPQHLFGRLQQLEVW-HDDLAAGFPVGLLEVLCSLENLVLS-CNSYEEIFSNEGCLEKHVDVRKFARIK 1141 (1344)
Q Consensus 1064 ~~~l~~~~~~~~~~~~l~~L~~L~l~-~~~l~~~~~~~~l~~l~~L~~L~i~-c~~l~~~~~~~~~~~~~~~~~~~~~L~ 1141 (1344)
+|.+.+.....+... ++|+.|+++ |+.+++.....+..++++|++|+++ |..+.+
T Consensus 80 ~~~l~~~~~~~l~~~--~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~--------------------- 136 (284)
T d2astb2 80 GLRLSDPIVNTLAKN--SNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE--------------------- 136 (284)
T ss_dssp TCBCCHHHHHHHTTC--TTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH---------------------
T ss_pred CCCCCCHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC---------------------
T ss_conf 467986789998518--997571510013412355403657887435652245332333---------------------
Q ss_pred EEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEECCC-CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCC
Q ss_conf 356245022778785108975300112016742243-3311235677643235655898806888521122346743101
Q 000701 1142 SLRLVCLNHLIKYLLKQDSQLNSIFQYLEFLSLQHC-RNLLSLLPLSSSISFGNLTHLVVHDCEKLVSLVTCSVAKSLER 1220 (1344)
Q Consensus 1142 ~L~l~~l~~~~~~l~~~~~~~~~~l~~L~~L~l~~c-~~l~~l~~~~~~~~l~~L~~L~i~~C~~l~~l~~~~~~~~l~~ 1220 (1344)
......+.. .++.|+.|++++| ..++.-........+++|++|++++|+.+++-....+ ..+++
T Consensus 137 -------~~~~~~~~~-------~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l-~~~~~ 201 (284)
T d2astb2 137 -------KHVQVAVAH-------VSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF-FQLNY 201 (284)
T ss_dssp -------HHHHHHHHH-------SCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG-GGCTT
T ss_pred -------CCCHHHHCC-------CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-CCCCC
T ss_conf -------220001000-------111110122135542444443434232322212355322347783033332-13576
Q ss_pred CCEEEECCCCCCEEEE-ECCCCCCCHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCC
Q ss_conf 2268771565632774-046889950222037662781741646516687722024699860563788771344478887
Q 000701 1221 LVMLSISGCSAMRQVI-IGCGQGDSDIAAANLKEEIVFSKLRYIGLLDLENLTSFCSGAANYTIKFPSLEDLSVTGCRNM 1299 (1344)
Q Consensus 1221 L~~L~i~~c~~l~~~~-~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~~l~~~~~~~~~~~~~~~sL~~L~i~~C~~l 1299 (1344)
|++|++++|..+++-. ..+.+ +|+|+.|++.+|-.-..+..-. ..+|.|+. +|..+
T Consensus 202 L~~L~L~~C~~i~~~~l~~L~~---------------~~~L~~L~l~~~~~d~~l~~l~----~~lp~L~i----~~~~l 258 (284)
T d2astb2 202 LQHLSLSRCYDIIPETLLELGE---------------IPTLKTLQVFGIVPDGTLQLLK----EALPHLQI----NCSHF 258 (284)
T ss_dssp CCEEECTTCTTCCGGGGGGGGG---------------CTTCCEEECTTSSCTTCHHHHH----HHSTTSEE----SCCCS
T ss_pred CCEEECCCCCCCCHHHHHHHHC---------------CCCCCEEEEECCCCHHHHHHHH----HHCCCCCC----CCCCC
T ss_conf 8779899999787378999726---------------9998989644888989999999----76843661----68658
Q ss_pred CCCCCCCCCCCCEEEECC
Q ss_conf 556899856886034214
Q 000701 1300 KIFTTGDLVTPKRVNVWF 1317 (1344)
Q Consensus 1300 ~~~~~~~~~~~~~~~~~~ 1317 (1344)
...............||+
T Consensus 259 s~~~~~~~~~~~~~~iw~ 276 (284)
T d2astb2 259 TTIARPTIGNKKNQEIWG 276 (284)
T ss_dssp CCTTCSSCSSTTCCCBTT
T ss_pred CCCCCCCCCCCCCCHHCC
T ss_conf 777788547666400105
No 22
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.47 E-value=1e-12 Score=92.00 Aligned_cols=99 Identities=22% Similarity=0.355 Sum_probs=48.2
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCC-CC-HHHHCCCCCCEEECCCC
Q ss_conf 299707988886771111577986887588777772--101354345535463687855-67-44205574548804455
Q 000701 556 RVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINSDIVK-LP-EAFGLLTKLRLLDLTDC 631 (1344)
Q Consensus 556 r~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~~l~~-lp-~~i~~L~~L~~L~l~~~ 631 (1344)
++++.++.+++.+|..+- .++++|++++|.+..+ ..|.++.+|++|+++++.+.. ++ ..+..+++++++.+..+
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~ 88 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECC
T ss_pred CEEEEECCCCCCCCCCCC--CCCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 999981899887688889--988999876991896496686146432321102211242010011222222222111112
Q ss_pred CCCCCCCHHHHCCCCCCCEEECCCC
Q ss_conf 4323239044303776878982024
Q 000701 632 FQLKVIAPNVLSSLIRLEELYMRNC 656 (1344)
Q Consensus 632 ~~l~~~~~~~l~~L~~L~~L~l~~~ 656 (1344)
..+...+.+.+..+.+|+++++..+
T Consensus 89 n~l~~~~~~~~~~l~~L~~l~l~~~ 113 (242)
T d1xwdc1 89 NNLLYINPEAFQNLPNLQYLLISNT 113 (242)
T ss_dssp TTCCEECTTSEECCTTCCEEEEESC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 3432222221222222222234211
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=3.9e-13 Score=94.63 Aligned_cols=109 Identities=18% Similarity=0.190 Sum_probs=82.3
Q ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHH-HHCCCCCCEEE
Q ss_conf 81398652997079888867711115779868875887777721013543455354636878556744-20557454880
Q 000701 549 FKEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEA-FGLLTKLRLLD 627 (1344)
Q Consensus 549 f~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~-i~~L~~L~~L~ 627 (1344)
|.+...+|.|+|++|.|+.+|+.+..+.+|++|++++|.+..++.+..+.+|++|++++|.+..+|.. +..+++|++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEECCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 16857484897889978865762004145998989799787647744576130643102134577763223345344342
Q ss_pred CCCCCCCCCCCH-HHHCCCCCCCEEECCCCCC
Q ss_conf 445543232390-4430377687898202442
Q 000701 628 LTDCFQLKVIAP-NVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 628 l~~~~~l~~~~~-~~l~~L~~L~~L~l~~~~~ 658 (1344)
+++| .+..++. ..+..+++|++|++.+|.+
T Consensus 94 L~~N-~i~~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 94 LTNN-SLVELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp CCSC-CCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred ECCC-CCCCCCCCCCCCCCCCCCHHHCCCCCC
T ss_conf 0300-016654211001365320664079963
No 24
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.34 E-value=9.3e-12 Score=86.02 Aligned_cols=100 Identities=23% Similarity=0.303 Sum_probs=61.2
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCCCC
Q ss_conf 299707988886771111577986887588777772-1013543455354636878556744205574548804455432
Q 000701 556 RVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI-AIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCFQL 634 (1344)
Q Consensus 556 r~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l-~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~~l 634 (1344)
|+|++++|.++.++. +..+.+|++|++++|.+..+ +.++.+.+|++|++++|.+..+|. ++.+++|++|++++| .+
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~-~~~l~~L~~L~l~~N-~i 77 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG-VANLPRLQELLLCNN-RL 77 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSS-CC
T ss_pred CEEECCCCCCCCCCC-CCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCCCCCEEECCCC-CC
T ss_conf 989868998988710-105898898979787168652156554313545324321123574-123355576888898-65
Q ss_pred CCCCH-HHHCCCCCCCEEECCCCCC
Q ss_conf 32390-4430377687898202442
Q 000701 635 KVIAP-NVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 635 ~~~~~-~~l~~L~~L~~L~l~~~~~ 658 (1344)
+.++. ..++.+++|+.|++.++.+
T Consensus 78 ~~~~~~~~l~~~~~L~~L~l~~N~i 102 (124)
T d1dcea3 78 QQSAAIQPLVSCPRLVLLNLQGNSL 102 (124)
T ss_dssp CSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCHHHCCCCCCCEEECCCCCC
T ss_conf 8888825653799999998979968
No 25
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.34 E-value=3.7e-12 Score=88.50 Aligned_cols=114 Identities=18% Similarity=0.208 Sum_probs=76.1
Q ss_pred CCCCCHHHHHCCCCCEEEEECCCCCCC-C-CCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCCH-
Q ss_conf 212567788139865299707988886-7-71111577986887588777772--101354345535463687855674-
Q 000701 541 EINISKSFFKEMRMLRVVGFSKMQLSS-L-PSSMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINSDIVKLPE- 615 (1344)
Q Consensus 541 ~~~l~~~~f~~l~~Lr~L~L~~~~i~~-l-p~~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~~l~~lp~- 615 (1344)
...+|.+++ ..+++|+|++|.|.. + +..|.++.+|+.|+++++.+..+ ..+..+.+|++|++++|.+..+|.
T Consensus 20 L~~iP~~lp---~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~ 96 (192)
T d1w8aa_ 20 LKEIPRDIP---LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNK 96 (192)
T ss_dssp CSSCCSCCC---TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSS
T ss_pred CCCCCCCCC---CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHH
T ss_conf 670298989---78788984898775530200257876272130136322121212221122221010035534434979
Q ss_pred HHHCCCCCCEEECCCCCCCCCCCHHHHCCCCCCCEEECCCCCC
Q ss_conf 4205574548804455432323904430377687898202442
Q 000701 616 AFGLLTKLRLLDLTDCFQLKVIAPNVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 616 ~i~~L~~L~~L~l~~~~~l~~~~~~~l~~L~~L~~L~l~~~~~ 658 (1344)
.|..+++|++|+++++ .++.++++.+..+.+|++|+++++.+
T Consensus 97 ~F~~l~~L~~L~L~~N-~l~~i~~~~f~~l~~L~~l~L~~N~~ 138 (192)
T d1w8aa_ 97 MFLGLHQLKTLNLYDN-QISCVMPGSFEHLNSLTSLNLASNPF 138 (192)
T ss_dssp SSTTCTTCCEEECCSS-CCCEECTTSSTTCTTCCEEECTTCCB
T ss_pred HHHCCCCCCCCCCCCC-CCCCCCHHHHCCCCCCCCCCCCCCCC
T ss_conf 9807974655245774-53535977856875334200036443
No 26
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=1.9e-12 Score=90.30 Aligned_cols=128 Identities=17% Similarity=0.158 Sum_probs=91.9
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CC-CCCC
Q ss_conf 998899995166514689863212567788139865299707988886771111577986887588777772-10-1354
Q 000701 520 PEGLEYPKLEFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI-AI-IGKL 597 (1344)
Q Consensus 520 ~~~~~~~~Lr~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l-~~-i~~L 597 (1344)
+....+.++|.|.+.++. +..++ +.+..+++|++|++++|.|..++ .+..+.+|++|++++|.+..+ +. +..+
T Consensus 12 ~~~~n~~~lr~L~L~~n~---I~~i~-~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l 86 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYK---IPVIE-NLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQAL 86 (162)
T ss_dssp CEEECTTSCEEEECTTSC---CCSCC-CGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred HHCCCCCCCCEEECCCCC---CCCCC-CCCCCCCCCCEEECCCCCCCCCC-CCCCCCCHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 751685748489788997---88657-62004145998989799787647-74457613064310213457776322334
Q ss_pred CCCCEEECCCCCCCCCCH--HHHCCCCCCEEECCCCCCCCCCCH---HHHCCCCCCCEEEC
Q ss_conf 345535463687855674--420557454880445543232390---44303776878982
Q 000701 598 KNLEILSMINSDIVKLPE--AFGLLTKLRLLDLTDCFQLKVIAP---NVLSSLIRLEELYM 653 (1344)
Q Consensus 598 ~~L~~L~l~~~~l~~lp~--~i~~L~~L~~L~l~~~~~l~~~~~---~~l~~L~~L~~L~l 653 (1344)
.+|++|++++|.+..++. .+..+++|++|++.+| .+...+. ..+..+++|+.|+.
T Consensus 87 ~~L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N-~i~~~~~~r~~~i~~lp~L~~LD~ 146 (162)
T d1a9na_ 87 PDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN-PVTNKKHYRLYVIYKVPQVRVLDF 146 (162)
T ss_dssp TTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSS-GGGGSTTHHHHHHHHCTTCSEETT
T ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHCCCC-CCCCCCCHHHHHHHHCCCCCEECC
T ss_conf 534434203000166542110013653206640799-634561069999987899583379
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.33 E-value=1.1e-11 Score=85.49 Aligned_cols=117 Identities=18% Similarity=0.280 Sum_probs=86.5
Q ss_pred CEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 16651468986321256778813986529970798888677111157798688758877777210135434553546368
Q 000701 529 EFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINS 608 (1344)
Q Consensus 529 r~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~ 608 (1344)
|.|.+.++. ...++. +..+..|++|++++|.++.+|+.+..+.+|++|++++|.+..++.++++.+|++|++++|
T Consensus 1 R~L~Ls~n~---l~~l~~--l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKD---LTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSC---CSSCCC--GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCGGGTTCSSCCEEECCSS
T ss_pred CEEECCCCC---CCCCCC--CCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
T ss_conf 989868998---988710--105898898979787168652156554313545324321123574123355576888898
Q ss_pred CCCCCC--HHHHCCCCCCEEECCCCCCCCCC---CHHHHCCCCCCCEE
Q ss_conf 785567--44205574548804455432323---90443037768789
Q 000701 609 DIVKLP--EAFGLLTKLRLLDLTDCFQLKVI---APNVLSSLIRLEEL 651 (1344)
Q Consensus 609 ~l~~lp--~~i~~L~~L~~L~l~~~~~l~~~---~~~~l~~L~~L~~L 651 (1344)
.+..+| ..+.++++|++|+++++ .+... +......+++|+.+
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N-~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGN-SLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTS-GGGGSSSCTTHHHHHCTTCSEE
T ss_pred CCCCCCCCHHHCCCCCCCEEECCCC-CCCCCCCHHHHHHHHCCCCCEE
T ss_conf 6588888256537999999989799-6886826799999989673138
No 28
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.1e-10 Score=79.33 Aligned_cols=78 Identities=17% Similarity=0.288 Sum_probs=35.3
Q ss_pred CCEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCCC-C--CCCCCCCCCCEEECCCC-CCCCCC-HHHHCCCCCCEEE
Q ss_conf 65299707988886771-11157798688758877777-2--10135434553546368-785567-4420557454880
Q 000701 554 MLRVVGFSKMQLSSLPS-SMDLLVNLQTLSLDQSMLGD-I--AIIGKLKNLEILSMINS-DIVKLP-EAFGLLTKLRLLD 627 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~lp~-~i~~L~~L~~L~L~~~~i~~-l--~~i~~L~~L~~L~l~~~-~l~~lp-~~i~~L~~L~~L~ 627 (1344)
.+++|++++|.|+.+|. .|.++.+|++|++++|.+.. + ..+.++.+++++.+..+ .+...+ ..+..+++|++++
T Consensus 30 ~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~ 109 (242)
T d1xwdc1 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 109 (242)
T ss_dssp CCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEE
T ss_pred CCCEEECCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88999876991896496686146432321102211242010011222222222111112343222222122222222223
Q ss_pred CCCC
Q ss_conf 4455
Q 000701 628 LTDC 631 (1344)
Q Consensus 628 l~~~ 631 (1344)
+.++
T Consensus 110 l~~~ 113 (242)
T d1xwdc1 110 ISNT 113 (242)
T ss_dssp EESC
T ss_pred CCHH
T ss_conf 4211
No 29
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.29 E-value=1.4e-11 Score=84.87 Aligned_cols=122 Identities=21% Similarity=0.342 Sum_probs=66.5
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCC-C--CCCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCEEECCCC
Q ss_conf 29970798888677111157798688758877777-2--10135434553546368785567-44205574548804455
Q 000701 556 RVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGD-I--AIIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRLLDLTDC 631 (1344)
Q Consensus 556 r~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~-l--~~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~l~~~ 631 (1344)
++++.++++++.+|..+ ..++++|+|++|.+.. + ..+.++.+|++|+++++.+..++ ..+..+++|++|++++|
T Consensus 11 ~~v~Cs~~~L~~iP~~l--p~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDI--PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCC--CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEEECCCCCCCCCCC--CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 99997089967029898--9787889848987755302002578762721301363221212122211222210100355
Q ss_pred CCCCCCCHHHHCCCCCCCEEECCCCCCCCEECCCCCCCCCCCHHHHCCCCCCCEEEEEEC
Q ss_conf 432323904430377687898202442310124445344455133149999969998907
Q 000701 632 FQLKVIAPNVLSSLIRLEELYMRNCFVQWEVRGVNTERSCAGLDELMHLPRLTSLEIDIG 691 (1344)
Q Consensus 632 ~~l~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~L~~l~~L~~L~i~~~ 691 (1344)
.++.++++.+.++.+|++|++.+|.+.... ...+..+++|+.+++.++
T Consensus 89 -~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~-----------~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 89 -KIKEISNKMFLGLHQLKTLNLYDNQISCVM-----------PGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp -CCCEECSSSSTTCTTCCEEECCSSCCCEEC-----------TTSSTTCTTCCEEECTTC
T ss_pred -CCCCCCHHHHHCCCCCCCCCCCCCCCCCCC-----------HHHHCCCCCCCCCCCCCC
T ss_conf -344349799807974655245774535359-----------778568753342000364
No 30
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.24 E-value=3.1e-14 Score=101.49 Aligned_cols=104 Identities=20% Similarity=0.277 Sum_probs=55.1
Q ss_pred CCEEEEECCCCCCC--CCCCCCCCCCCCEEECCCCCCCC-----C-CCCCCCCCCCEEECCCCCCCC-----CCHHHH-C
Q ss_conf 65299707988886--77111157798688758877777-----2-101354345535463687855-----674420-5
Q 000701 554 MLRVVGFSKMQLSS--LPSSMDLLVNLQTLSLDQSMLGD-----I-AIIGKLKNLEILSMINSDIVK-----LPEAFG-L 619 (1344)
Q Consensus 554 ~Lr~L~L~~~~i~~--lp~~i~~L~~L~~L~L~~~~i~~-----l-~~i~~L~~L~~L~l~~~~l~~-----lp~~i~-~ 619 (1344)
.|++||++++.+.. +..-+..++++++|+|++|.+.+ + ..+..+++|++|++++|.+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHCC
T ss_conf 87779820895886899999976779999982899998899999999985399988897959859728999999998437
Q ss_pred CCCCCEEECCCCCCCCCCCH----HHHCCCCCCCEEECCCCCC
Q ss_conf 57454880445543232390----4430377687898202442
Q 000701 620 LTKLRLLDLTDCFQLKVIAP----NVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 620 L~~L~~L~l~~~~~l~~~~~----~~l~~L~~L~~L~l~~~~~ 658 (1344)
..+|++|++++| .++.... ..+..+++|++|++.+|.+
T Consensus 83 ~~~L~~L~L~~n-~it~~~~~~l~~~l~~~~~L~~L~L~~N~i 124 (460)
T d1z7xw1 83 SCKIQKLSLQNC-CLTGAGCGVLSSTLRTLPTLQELHLSDNLL 124 (460)
T ss_dssp TCCCCEEECTTS-CCBGGGHHHHHHHTTSCTTCCEEECCSSBC
T ss_pred CCCCCEEECCCC-CCCCCCCCCCCCHHHCCCCCCCCCCCCCCC
T ss_conf 887788778887-754322101211000034320024443320
No 31
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.24 E-value=1.3e-08 Score=66.40 Aligned_cols=169 Identities=16% Similarity=0.187 Sum_probs=110.5
Q ss_pred CCCCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHH
Q ss_conf 65621209899999999871------997399999189994889999999998422899889999928999999999999
Q 000701 152 YEAFESRFSTLRDIRNALTN------ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEI 225 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~~------~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i 225 (1344)
+..++||+.+++.+.++|.. ...+.+.|+|++|+|||++|+.+++....... ...+++..............+
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~ 93 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT-ARFVYINGFIYRNFTAIIGEI 93 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCC-CEEEEEETTTCCSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCC-CCEEEECCHHHHHHHHHHHHH
T ss_conf 8878877999999999999998578988881688898999899999999999754468-857873230011246665456
Q ss_pred HHHHCCCCCC--CCHHHHHHHHHHHHH-CCCEEEEEEECCCCCCC-----CCCCCCCCCC-CCCCEEEEEEECCHHHHHH
Q ss_conf 9995354453--317999999999998-39819999929998532-----0112676789-9982389998258678873
Q 000701 226 AEKLGLILHE--ETVSRRASRLYERLK-EEKKILVVLDNLWKCLN-----LETVGIPYGD-DHKGCKILLTSRDRSVLLK 296 (1344)
Q Consensus 226 ~~~l~~~~~~--~~~~~~~~~l~~~l~-~~~~~LlVlDdv~~~~~-----~~~l~~~l~~-~~~~~~iivTtR~~~v~~~ 296 (1344)
....+..... .........+.+... .......++|+++.... ...+...... ......++.++........
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 173 (276)
T d1fnna2 94 ARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNN 173 (276)
T ss_dssp HHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSCHHHHHHHHHHTTCHHHHSSCCEEEEEEESSTHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHH
T ss_conf 77643345553254357899999987520654332036888753543106888874044335652488625876454431
Q ss_pred -------HCCCCCEECCCCCHHHHHHHHHHHH
Q ss_conf -------0999949846999999999999981
Q 000701 297 -------MGSAPPFLIGVLNEEEAWRLFKMTA 321 (1344)
Q Consensus 297 -------~~~~~~~~l~~l~~~e~~~lf~~~~ 321 (1344)
......+.+.+++.++.++++.+++
T Consensus 174 ~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~ 205 (276)
T d1fnna2 174 LDPSTRGIMGKYVIRFSPYTKDQIFDILLDRA 205 (276)
T ss_dssp SCHHHHHHHTTCEEECCCCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHCCHHCCCCCHHHHHHHHHHHHHH
T ss_conf 13036655110110344123888999999999
No 32
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.20 E-value=2.2e-12 Score=89.97 Aligned_cols=107 Identities=21% Similarity=0.329 Sum_probs=57.5
Q ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEE
Q ss_conf 8139865299707988886771111577986887588777772-101354345535463687855674420557454880
Q 000701 549 FKEMRMLRVVGFSKMQLSSLPSSMDLLVNLQTLSLDQSMLGDI-AIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLD 627 (1344)
Q Consensus 549 f~~l~~Lr~L~L~~~~i~~lp~~i~~L~~L~~L~L~~~~i~~l-~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~ 627 (1344)
+..++.|++|++++|.|+.++ .+..+.+|++|++++|.+..+ ..+..+.+|++|++++|.+..++ .+..+++|+.|+
T Consensus 44 l~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~ 121 (198)
T d1m9la_ 44 LSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLY 121 (198)
T ss_dssp HHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEEECCCHH-HHHHHHHSSEEE
T ss_pred HHCCCCCCEEECCCCCCCCCC-CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC
T ss_conf 762604615199446899864-424782535734135343210000332212333333332222222-222222341112
Q ss_pred CCCCCCCCCCCH-HHHCCCCCCCEEECCCCCC
Q ss_conf 445543232390-4430377687898202442
Q 000701 628 LTDCFQLKVIAP-NVLSSLIRLEELYMRNCFV 658 (1344)
Q Consensus 628 l~~~~~l~~~~~-~~l~~L~~L~~L~l~~~~~ 658 (1344)
+++| .++.++. ..++.+++|+.|++.+|.+
T Consensus 122 L~~N-~i~~~~~~~~l~~l~~L~~L~L~~N~l 152 (198)
T d1m9la_ 122 MSNN-KITNWGEIDKLAALDKLEDLLLAGNPL 152 (198)
T ss_dssp ESEE-ECCCHHHHHHHTTTTTCSEEEECSSHH
T ss_pred CCCC-HHCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 3410-212554221236777630234279843
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.14 E-value=3.5e-12 Score=88.65 Aligned_cols=125 Identities=22% Similarity=0.300 Sum_probs=95.2
Q ss_pred CEEEEECCC--CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHCCCCCCEEECCCCC
Q ss_conf 529970798--888677111157798688758877777210135434553546368785567442055745488044554
Q 000701 555 LRVVGFSKM--QLSSLPSSMDLLVNLQTLSLDQSMLGDIAIIGKLKNLEILSMINSDIVKLPEAFGLLTKLRLLDLTDCF 632 (1344)
Q Consensus 555 Lr~L~L~~~--~i~~lp~~i~~L~~L~~L~L~~~~i~~l~~i~~L~~L~~L~l~~~~l~~lp~~i~~L~~L~~L~l~~~~ 632 (1344)
++.+++++. .+..+|.++..+.+|++|++++|.|+.++.+..+++|++|++++|.+..+|.....+++|+.|++++|
T Consensus 25 ~~~~~l~~~~~~i~~l~~sl~~L~~L~~L~Ls~n~I~~i~~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N- 103 (198)
T d1m9la_ 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN- 103 (198)
T ss_dssp CSCEECCBCCTTCCCCHHHHHHTTTCCEEECSEEEESCCCCHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 3100255556852002467762604615199446899864424782535734135343210000332212333333332-
Q ss_pred CCCCCCHHHHCCCCCCCEEECCCCCCCCEECCCCCCCCCCCHHHHCCCCCCCEEEEEECC
Q ss_conf 323239044303776878982024423101244453444551331499999699989078
Q 000701 633 QLKVIAPNVLSSLIRLEELYMRNCFVQWEVRGVNTERSCAGLDELMHLPRLTSLEIDIGN 692 (1344)
Q Consensus 633 ~l~~~~~~~l~~L~~L~~L~l~~~~~~~~~~~~~~~~~~~~l~~L~~l~~L~~L~i~~~~ 692 (1344)
.++.++. +..+++|++|++++|.+. ....+..+..+++|+.|++.++.
T Consensus 104 ~i~~l~~--~~~l~~L~~L~L~~N~i~----------~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 104 QIASLSG--IEKLVNLRVLYMSNNKIT----------NWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp ECCCHHH--HHHHHHSSEEEESEEECC----------CHHHHHHHTTTTTCSEEEECSSH
T ss_pred CCCCCCC--CCCCCCCCCCCCCCCHHC----------CCCCCCCCCCCCCCCEEECCCCC
T ss_conf 2222222--222223411123410212----------55422123677763023427984
No 34
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=4e-12 Score=88.33 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=55.0
Q ss_pred CCCEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCC-----CCCCCCCCCCCCEEECCCCCCCCC--CC----CC
Q ss_conf 95166514689863212567788139865299707988886-----771111577986887588777772--10----13
Q 000701 527 KLEFLFMCSKDPFVEINISKSFFKEMRMLRVVGFSKMQLSS-----LPSSMDLLVNLQTLSLDQSMLGDI--AI----IG 595 (1344)
Q Consensus 527 ~Lr~L~l~~~~~~~~~~l~~~~f~~l~~Lr~L~L~~~~i~~-----lp~~i~~L~~L~~L~L~~~~i~~l--~~----i~ 595 (1344)
+|+.|.+.++.- ...--...+..++++++|+|++|.++. +...+..+++|++|+|++|.+.+. .. +.
T Consensus 3 ~l~~ld~~~~~i--~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 3 DIQSLDIQCEEL--SDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEEESCCC--CHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--CHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHH
T ss_conf 877798208958--868999999767799999828999988999999999853999888979598597289999999984
Q ss_pred -CCCCCCEEECCCCCCCC-----CCHHHHCCCCCCEEECCCC
Q ss_conf -54345535463687855-----6744205574548804455
Q 000701 596 -KLKNLEILSMINSDIVK-----LPEAFGLLTKLRLLDLTDC 631 (1344)
Q Consensus 596 -~L~~L~~L~l~~~~l~~-----lp~~i~~L~~L~~L~l~~~ 631 (1344)
...+|++|++++|.+.. ++..+..+++|++|++++|
T Consensus 81 ~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N 122 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 122 (460)
T ss_dssp STTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSS
T ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
T ss_conf 378877887788877543221012110000343200244433
No 35
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.12 E-value=6e-10 Score=74.72 Aligned_cols=183 Identities=15% Similarity=0.132 Sum_probs=115.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 98656212098999999998719973999991899948899999999984228998899999289999999999999995
Q 000701 150 TGYEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 150 ~~~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
...++++|.++.++.|..|+..++.+-+.++|+.|+||||+|+.+++....+..-..+.-++.++......+...+....
T Consensus 12 ~~~~d~ig~~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~~~~~~~i~~~~~~~~ 91 (224)
T d1sxjb2 12 QVLSDIVGNKETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGIDVVRNQIKHFA 91 (224)
T ss_dssp SSGGGCCSCTHHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTSCCSHHHHHTHHHHHH
T ss_pred CCHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHH
T ss_conf 98999029799999999999869987499988999870546999999972566432211111345578521166788788
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEECCH-HHHH-HHCCCCCEEC
Q ss_conf 3544533179999999999983981999992999853--2011267678999823899982586-7887-3099994984
Q 000701 230 GLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTSRDR-SVLL-KMGSAPPFLI 305 (1344)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTtR~~-~v~~-~~~~~~~~~l 305 (1344)
...... ..++.-++|+|+++... ....+...+.......++++++... .+.. .......+++
T Consensus 92 ~~~~~~--------------~~~~~kviiiDe~d~~~~~~~~~ll~~~e~~~~~~~~i~~~~~~~~i~~~l~sr~~~i~~ 157 (224)
T d1sxjb2 92 QKKLHL--------------PPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNKIIEPLQSQCAILRY 157 (224)
T ss_dssp HBCCCC--------------CTTCCEEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEEC
T ss_pred HHHCCC--------------CCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 762247--------------776359999824432321577877520112333336653147430210678877777653
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH
Q ss_conf 699999999999998199988830399999999992998599
Q 000701 306 GVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIA 347 (1344)
Q Consensus 306 ~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPla 347 (1344)
.+++.++-..++.+.+......- ..+....|++.++|.+..
T Consensus 158 ~~~~~~~i~~~l~~i~~~e~~~i-~~~~l~~I~~~s~Gd~R~ 198 (224)
T d1sxjb2 158 SKLSDEDVLKRLLQIIKLEDVKY-TNDGLEAIIFTAEGDMRQ 198 (224)
T ss_dssp CCCCHHHHHHHHHHHHHHHTCCB-CHHHHHHHHHHHTTCHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHCCCCHHH
T ss_conf 13322456788877777404678-999999999986996999
No 36
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.11 E-value=1.2e-09 Score=72.95 Aligned_cols=179 Identities=13% Similarity=0.105 Sum_probs=111.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 86562120989999999987199739999918999488999999999842289988999992899999999999999953
Q 000701 151 GYEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLG 230 (1344)
Q Consensus 151 ~~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~ 230 (1344)
..++++|.++.++.|..|+..+..+.+.++|+.|+||||+|+.+++..........+.-.+.+.................
T Consensus 12 ~~~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 91 (227)
T d1sxjc2 12 TLDEVYGQNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGIDVVRNQIKDFAS 91 (227)
T ss_dssp SGGGCCSCHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTSCCSHHHHHTHHHHHHH
T ss_pred CHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHCCC
T ss_conf 99983596999999999997699985999889987755899999998516777641577315556875432100010111
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEECCH-HHHH-HHCCCCCEECC
Q ss_conf 544533179999999999983981999992999853--2011267678999823899982586-7887-30999949846
Q 000701 231 LILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTSRDR-SVLL-KMGSAPPFLIG 306 (1344)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTtR~~-~v~~-~~~~~~~~~l~ 306 (1344)
... ...++...+|+|+++... .-..+...+......++++++|... .+.. .......+.+.
T Consensus 92 ~~~---------------~~~~~~kiiiiDe~d~~~~~~~~~Ll~~le~~~~~~~~~~~~~~~~~i~~~i~sr~~~i~~~ 156 (227)
T d1sxjc2 92 TRQ---------------IFSKGFKLIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLTPALLSQCTRFRFQ 156 (227)
T ss_dssp BCC---------------SSSCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHTTSEEEECC
T ss_pred CCC---------------CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 000---------------25777189999663200023789999886311200232012670877599999887540123
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH
Q ss_conf 999999999999981999888303999999999929985
Q 000701 307 VLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLP 345 (1344)
Q Consensus 307 ~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glP 345 (1344)
+++.++...++.+.+......-+ .+....|++.++|..
T Consensus 157 ~~~~~~i~~~l~~I~~~e~i~i~-~~~l~~i~~~s~Gd~ 194 (227)
T d1sxjc2 157 PLPQEAIERRIANVLVHEKLKLS-PNAEKALIELSNGDM 194 (227)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCBC-HHHHHHHHHHHTTCH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHCCCCH
T ss_conf 56520001102122111124589-899999999849969
No 37
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.06 E-value=9.8e-08 Score=60.91 Aligned_cols=199 Identities=18% Similarity=0.175 Sum_probs=117.9
Q ss_pred CCCCCCHHHHHHHHHHHHH----CC----CC-EEEEEECCCCCCHHHHHHHHHHHHHH----CCCCCEEEEEECCCCCCH
Q ss_conf 6562120989999999987----19----97-39999918999488999999999842----289988999992899999
Q 000701 152 YEAFESRFSTLRDIRNALT----NA----NA-GIIGVYGMGGIGKTTLVKAVARQAKE----RKLFDQVVFSEVSQTPNI 218 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~----~~----~~-~vi~I~G~~G~GKTtLa~~~~~~~~~----~~~f~~~~wv~~~~~~~~ 218 (1344)
++.+.||+.++++|.+++. .+ +. .++.++|++|+|||++++.+++.... ........++++......
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 94 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNL 94 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCH
T ss_conf 99888789999999999999997499888853489967899989999999999998754155567841663033334650
Q ss_pred HHHHHHHHHHHCCCCCC--CCHHHHHHHHHHHHH-CCCEEEEEEECCCCCCC-----------CCCC---CCCCCCCCCC
Q ss_conf 99999999995354453--317999999999998-39819999929998532-----------0112---6767899982
Q 000701 219 KDIQKEIAEKLGLILHE--ETVSRRASRLYERLK-EEKKILVVLDNLWKCLN-----------LETV---GIPYGDDHKG 281 (1344)
Q Consensus 219 ~~~~~~i~~~l~~~~~~--~~~~~~~~~l~~~l~-~~~~~LlVlDdv~~~~~-----------~~~l---~~~l~~~~~~ 281 (1344)
......+....+..... .........+..... .+...++++|.++.... +..+ ..........
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~~~~~~~l~~l~~~l~~~~~~~~~ 174 (287)
T d1w5sa2 95 YTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVHEEIPSRDGVNRI 174 (287)
T ss_dssp HHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSCHHHHHHHHTHHHHSCCTTSCCBE
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHCCCCE
T ss_conf 46788876530432333451278899999999985467665412578885156655426789889998743201045651
Q ss_pred EEEEEEECCHHHHH--------HHCCCCCEECCCCCHHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHH------CCCHH
Q ss_conf 38999825867887--------30999949846999999999999981999-88830399999999992------99859
Q 000701 282 CKILLTSRDRSVLL--------KMGSAPPFLIGVLNEEEAWRLFKMTAGDD-VEHRELNSTARNVAMAC------GGLPI 346 (1344)
Q Consensus 282 ~~iivTtR~~~v~~--------~~~~~~~~~l~~l~~~e~~~lf~~~~~~~-~~~~~~~~~~~~i~~~~------~glPl 346 (1344)
..|++++....... .......+.+++++.++..+++..++... ....-.++..+.|+++. .|.|-
T Consensus 175 ~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~~~~~~~gd~R 254 (287)
T d1w5sa2 175 GFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYGEDKGGDGSAR 254 (287)
T ss_dssp EEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHCGGGTSCCCHH
T ss_pred EEEEECCCHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHH
T ss_conf 47762430899999986252011232206522577599999987666777524687799999999999723036788999
Q ss_pred -HHHH
Q ss_conf -9999
Q 000701 347 -ALTT 350 (1344)
Q Consensus 347 -ai~~ 350 (1344)
|+.+
T Consensus 255 ~ai~~ 259 (287)
T d1w5sa2 255 RAIVA 259 (287)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
No 38
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.06 E-value=5.3e-09 Score=68.79 Aligned_cols=155 Identities=12% Similarity=0.131 Sum_probs=100.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCC----CC-EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 562120989999999987199739999918999488999999999842289----98-8999992899999999999999
Q 000701 153 EAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKL----FD-QVVFSEVSQTPNIKDIQKEIAE 227 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~----f~-~~~wv~~~~~~~~~~~~~~i~~ 227 (1344)
+..+||++++++++..|......-+.++|++|+|||+++..+++....... .+ .++.++.+.-.
T Consensus 18 d~~igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~~~li----------- 86 (268)
T d1r6bx2 18 DPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLL----------- 86 (268)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCCC--------------
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHH-----------
T ss_conf 866380999999999995476689679888988677999999999981784500035412786405675-----------
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC----------CCCCCCCCCCCCCCCEEEEEEECCHHHHHHH
Q ss_conf 953544533179999999999983981999992999853----------2011267678999823899982586788730
Q 000701 228 KLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL----------NLETVGIPYGDDHKGCKILLTSRDRSVLLKM 297 (1344)
Q Consensus 228 ~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~----------~~~~l~~~l~~~~~~~~iivTtR~~~v~~~~ 297 (1344)
..........+....+.+.+...++.++++|++.... +...+..++.. ....++|.+|..+......
T Consensus 87 --ag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~-rg~i~vIgatT~eey~~~~ 163 (268)
T d1r6bx2 87 --AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS-SGKIRVIGSTTYQEFSNIF 163 (268)
T ss_dssp --CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS-SCCCEEEEEECHHHHHCCC
T ss_pred --CCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHH-CCCCEEEEECCHHHHHHHH
T ss_conf --0676300589999999998612678468843369886277778864117987648874-7987599957999999998
Q ss_pred C-------CCCCEECCCCCHHHHHHHHHHHH
Q ss_conf 9-------99949846999999999999981
Q 000701 298 G-------SAPPFLIGVLNEEEAWRLFKMTA 321 (1344)
Q Consensus 298 ~-------~~~~~~l~~l~~~e~~~lf~~~~ 321 (1344)
. -.+.+.+++.+.+++..++....
T Consensus 164 e~d~al~rrF~~I~V~Eps~e~t~~IL~~~~ 194 (268)
T d1r6bx2 164 EKDRALARRFQKIDITEPSIEETVQIINGLK 194 (268)
T ss_dssp CCTTSSGGGEEEEECCCCCHHHHHHHHHHHH
T ss_pred HHCHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf 6167888652100368989999999999866
No 39
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.02 E-value=2.4e-09 Score=70.97 Aligned_cols=179 Identities=12% Similarity=0.109 Sum_probs=106.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCC-EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8656212098999999998719973999991899948899999999984228998-899999289999999999999995
Q 000701 151 GYEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFD-QVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 151 ~~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~-~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
..++++|.++.++.+..|+..++.+-+.++|+.|+||||+|+.+++..... .+. ..+-++.+.......+...+....
T Consensus 22 ~~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l~~~-~~~~~~~e~n~s~~~~~~~~~~~~~~~~ 100 (231)
T d1iqpa2 22 RLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGE-NWRHNFLELNASDERGINVIREKVKEFA 100 (231)
T ss_dssp STTTCCSCHHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHHHGG-GHHHHEEEEETTCHHHHHTTHHHHHHHH
T ss_pred CHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 899913939999999999985999769997899974879999999998731-4677715875676666348888888887
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEEC-CHHHHHH-HCCCCCEEC
Q ss_conf 3544533179999999999983981999992999853--20112676789998238999825-8678873-099994984
Q 000701 230 GLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTSR-DRSVLLK-MGSAPPFLI 305 (1344)
Q Consensus 230 ~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTtR-~~~v~~~-~~~~~~~~l 305 (1344)
... .....++.++++|+++... ....+...+........++.||. ...+... ......+.+
T Consensus 101 ~~~---------------~~~~~~~~iilide~d~~~~~~~~~ll~~l~~~~~~~~~i~~~n~~~~i~~~l~sR~~~i~~ 165 (231)
T d1iqpa2 101 RTK---------------PIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRF 165 (231)
T ss_dssp HSC---------------CGGGCSCEEEEEETGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHTEEEEEC
T ss_pred HHH---------------HCCCCCCEEEEEHHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHCHHHHHCCCCCCCC
T ss_conf 510---------------01578722886143443121478987641124776447886148766565768473121012
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
Q ss_conf 69999999999999819998883039999999999299859
Q 000701 306 GVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPI 346 (1344)
Q Consensus 306 ~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPl 346 (1344)
.+.+.++....+++.+...... -..+..+.|++.++|...
T Consensus 166 ~~~~~~~~~~~l~~~~~~e~i~-i~~~~l~~I~~~~~gdiR 205 (231)
T d1iqpa2 166 RPLRDEDIAKRLRYIAENEGLE-LTEEGLQAILYIAEGDMR 205 (231)
T ss_dssp CCCCHHHHHHHHHHHHHTTTCE-ECHHHHHHHHHHHTTCHH
T ss_pred CCCCHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHCCCCHH
T ss_conf 3343046778998889983999-899999999998399799
No 40
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.01 E-value=3.7e-08 Score=63.56 Aligned_cols=183 Identities=13% Similarity=0.178 Sum_probs=108.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHCCCCC-------------------EEEEE
Q ss_conf 865621209899999999871997-3999991899948899999999984228998-------------------89999
Q 000701 151 GYEAFESRFSTLRDIRNALTNANA-GIIGVYGMGGIGKTTLVKAVARQAKERKLFD-------------------QVVFS 210 (1344)
Q Consensus 151 ~~~~~~gR~~~~~~l~~~l~~~~~-~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~-------------------~~~wv 210 (1344)
..+.++|.++.++.+..++..++. ..+.++|+.|+|||++|+.+++......... .+..+
T Consensus 10 ~~~dlig~~~~~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 89 (239)
T d1njfa_ 10 TFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEI 89 (239)
T ss_dssp SGGGSCSCHHHHHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHHHHHHHTCCTTEEEE
T ss_pred CHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEE
T ss_conf 89881595999999999998599870598888998758999999999846855666675554247999974798707996
Q ss_pred ECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 92899999999999999953544533179999999999983981999992999853--2011267678999823899982
Q 000701 211 EVSQTPNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTS 288 (1344)
Q Consensus 211 ~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTt 288 (1344)
+.+.......+ +.+.+.+.... ..++.-++|+|+++... .-..+...+-....++++|++|
T Consensus 90 ~~~~~~~i~~i-r~~~~~~~~~~----------------~~~~~kviiIde~d~l~~~~q~~Llk~lE~~~~~~~~il~t 152 (239)
T d1njfa_ 90 DAASRTKVEDT-RDLLDNVQYAP----------------ARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT 152 (239)
T ss_dssp ETTCSSSHHHH-HHHHHSCCCSC----------------SSSSSEEEEEETGGGSCHHHHHHHHHHHHSCCTTEEEEEEE
T ss_pred CCHHCCCHHHH-HHHHHHHHHCC----------------CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 11200789999-99999997465----------------25998799997811089999999999985689886999973
Q ss_pred CCH-HHHH-HHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH-HHHHH
Q ss_conf 586-7887-309999498469999999999999819998883039999999999299859-99999
Q 000701 289 RDR-SVLL-KMGSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPI-ALTTI 351 (1344)
Q Consensus 289 R~~-~v~~-~~~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPl-ai~~~ 351 (1344)
.+. .+.. .......+.+.+++.++..+.+...+...... -.++....|++.++|.+- |+..+
T Consensus 153 n~~~~i~~~i~SRc~~i~~~~~~~~~i~~~l~~i~~~e~~~-~~~~~l~~i~~~s~Gd~R~ain~l 217 (239)
T d1njfa_ 153 TDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIA-HEPRALQLLARAAEGSLRDALSLT 217 (239)
T ss_dssp SCGGGSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCC-BCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 88563676576121022224676787666887877643147-899999999997699799999999
No 41
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.95 E-value=1.9e-09 Score=71.62 Aligned_cols=193 Identities=11% Similarity=0.113 Sum_probs=113.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCCEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 656212098999999998719973999991899948899999999984228-9988999992899999999999999953
Q 000701 152 YEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERK-LFDQVVFSEVSQTPNIKDIQKEIAEKLG 230 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~-~f~~~~wv~~~~~~~~~~~~~~i~~~l~ 230 (1344)
.++++|+++.++.+..|+..+..+.+.++|+.|+||||+|+.+++...... .......++.+...........+-....
T Consensus 11 ~~diig~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (237)
T d1sxjd2 11 LDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFAR 90 (237)
T ss_dssp TTTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSSSCCCHHHHTTHHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHEECCCCCCCHHHHHHHHHHHH
T ss_conf 88726939999999999986998859998999998499999999997097633432122002113560678999988765
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEECCH-HHHH-HHCCCCCEECC
Q ss_conf 544533179999999999983981999992999853--2011267678999823899982586-7887-30999949846
Q 000701 231 LILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTSRDR-SVLL-KMGSAPPFLIG 306 (1344)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTtR~~-~v~~-~~~~~~~~~l~ 306 (1344)
......... ........+.-.+|+|+++... ....+...+.......++++|+... .+.. .......+.+.
T Consensus 91 ~~~~~~~~~-----~~~~~~~~~~~viiiDe~d~l~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~l~sr~~~i~f~ 165 (237)
T d1sxjd2 91 LTVSKPSKH-----DLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASQCSKFRFK 165 (237)
T ss_dssp SCCCCCCTT-----HHHHSCCCSCEEEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSCHHHHHHSEEEECC
T ss_pred HHHHHHHHH-----HHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
T ss_conf 444324678-----776135667369999551336777788876301222233332122466422233111000110233
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCH-HHHHH
Q ss_conf 999999999999981999888303999999999929985-99999
Q 000701 307 VLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLP-IALTT 350 (1344)
Q Consensus 307 ~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glP-lai~~ 350 (1344)
+++.++...++.+.+......- ..+..+.|++.++|-. -|+..
T Consensus 166 ~~~~~~~~~~L~~i~~~e~i~i-~~~~l~~ia~~s~gd~R~ai~~ 209 (237)
T d1sxjd2 166 ALDASNAIDRLRFISEQENVKC-DDGVLERILDISAGDLRRGITL 209 (237)
T ss_dssp CCCHHHHHHHHHHHHHTTTCCC-CHHHHHHHHHHTSSCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCC-CHHHHHHHHHHCCCCHHHHHHH
T ss_conf 3333211001011455526757-8999999999859989999999
No 42
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=98.92 E-value=2.2e-08 Score=64.95 Aligned_cols=154 Identities=12% Similarity=0.154 Sum_probs=96.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCC-EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 56212098999999998719973999991899948899999999984228----998-8999992899999999999999
Q 000701 153 EAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERK----LFD-QVVFSEVSQTPNIKDIQKEIAE 227 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~----~f~-~~~wv~~~~~~~~~~~~~~i~~ 227 (1344)
+.++||+.+++++++.|......-+.++|++|+|||+++..++....... ..+ .+++++++.-..
T Consensus 22 d~~~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~~~l~a---------- 91 (387)
T d1qvra2 22 DPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLA---------- 91 (387)
T ss_dssp CCCCSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC---------------
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHHHHHC----------
T ss_conf 9874808999999999824889997687999988999999999999808999788696689955766652----------
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEEECCCCCCC---------CCC-CCCCCCCCCCCEEEEEEECCHHHHHH
Q ss_conf 953544533179999999999983-9819999929998532---------011-26767899982389998258678873
Q 000701 228 KLGLILHEETVSRRASRLYERLKE-EKKILVVLDNLWKCLN---------LET-VGIPYGDDHKGCKILLTSRDRSVLLK 296 (1344)
Q Consensus 228 ~l~~~~~~~~~~~~~~~l~~~l~~-~~~~LlVlDdv~~~~~---------~~~-l~~~l~~~~~~~~iivTtR~~~v~~~ 296 (1344)
.. .. .....+....+...+.. ..+.++++|++..... ... +...+. ....++|.+|........
T Consensus 92 g~--~~-~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~--rg~~~~I~~tT~~ey~~~ 166 (387)
T d1qvra2 92 GA--KY-RGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALA--RGELRLIGATTLDEYREI 166 (387)
T ss_dssp ---------CHHHHHHHHHHHHHTTCSSEEEEECCC-------------------HHHHH--TTCCCEEEEECHHHHHHH
T ss_pred CC--CC-CHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHH--CCCCCEEEECCHHHHHHH
T ss_conf 66--74-13689999999998505899669872408888427778774138999999973--788516663689999876
Q ss_pred ------HCCCCCEECCCCCHHHHHHHHHHHH
Q ss_conf ------0999949846999999999999981
Q 000701 297 ------MGSAPPFLIGVLNEEEAWRLFKMTA 321 (1344)
Q Consensus 297 ------~~~~~~~~l~~l~~~e~~~lf~~~~ 321 (1344)
....+.+.+++.+.+++..++....
T Consensus 167 e~d~al~rrF~~v~v~ep~~~~~~~il~~~~ 197 (387)
T d1qvra2 167 EKDPALERRFQPVYVDEPTVEETISILRGLK 197 (387)
T ss_dssp TTCTTTCSCCCCEEECCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 3367999824611279986788999999999
No 43
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.88 E-value=1.2e-08 Score=66.64 Aligned_cols=191 Identities=12% Similarity=0.090 Sum_probs=101.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHCC-CCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCCEEEEEECCCC----------
Q ss_conf 8656212098999999998719-973999991899948899999999984228----9988999992899----------
Q 000701 151 GYEAFESRFSTLRDIRNALTNA-NAGIIGVYGMGGIGKTTLVKAVARQAKERK----LFDQVVFSEVSQT---------- 215 (1344)
Q Consensus 151 ~~~~~~gR~~~~~~l~~~l~~~-~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~----~f~~~~wv~~~~~---------- 215 (1344)
..++++|+++..+.|..++..+ ..+-+.++|++|+||||+|+.+++...... ..+...+......
T Consensus 9 ~~~diig~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (252)
T d1sxje2 9 SLNALSHNEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSP 88 (252)
T ss_dssp SGGGCCSCHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCEECS
T ss_pred CHHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
T ss_conf 79883583999999999997699878599889999988999999997622764222221234443466631122110477
Q ss_pred -----------CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCE
Q ss_conf -----------999999999999953544533179999999999983981999992999853--2011267678999823
Q 000701 216 -----------PNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPYGDDHKGC 282 (1344)
Q Consensus 216 -----------~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~ 282 (1344)
...........+........ ... .-.... .++.-++++|+++... ....+...+......+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~-~~~~~iiiide~d~l~~~~~~~l~~~~e~~~~~~ 162 (252)
T d1sxje2 89 YHLEITPSDMGNNDRIVIQELLKEVAQMEQV----DFQ-DSKDGL-AHRYKCVIINEANSLTKDAQAALRRTMEKYSKNI 162 (252)
T ss_dssp SEEEECCC----CCHHHHHHHHHHHTTTTC------------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTE
T ss_pred CCCEEEECCCCCCCCCEEEEHHHHHHHHHHH----HHH-HCCCCC-CCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
T ss_conf 6310000104457752243102234343310----012-114666-7872499942433345431112210022135664
Q ss_pred EEEEEECCHH-HHH-HHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHH
Q ss_conf 8999825867-887-3099994984699999999999998199988830399999999992998599
Q 000701 283 KILLTSRDRS-VLL-KMGSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIA 347 (1344)
Q Consensus 283 ~iivTtR~~~-v~~-~~~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPla 347 (1344)
++|+||.+.. +.. ..+-...+++.+++.++..+++...+.........+++...|++.++|.+..
T Consensus 163 ~~Il~tn~~~~i~~~l~sR~~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l~~i~~~s~Gd~R~ 229 (252)
T d1sxje2 163 RLIMVCDSMSPIIAPIKSQCLLIRCPAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRV 229 (252)
T ss_dssp EEEEEESCSCSSCHHHHTTSEEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHHHHHHHHHTTCHHH
T ss_pred CCEEEECCCCCHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 3000102111002544210002430353304689999999998399989699999999986994999
No 44
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.84 E-value=1.4e-08 Score=66.24 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=44.2
Q ss_pred EEECCCCCCCCCCCCCCCCCCCEEECCCC-CCCCC--CCCCCCCCCCEEECCCCCCCCCC-HHHHCCCCCCEEECCCCCC
Q ss_conf 97079888867711115779868875887-77772--10135434553546368785567-4420557454880445543
Q 000701 558 VGFSKMQLSSLPSSMDLLVNLQTLSLDQS-MLGDI--AIIGKLKNLEILSMINSDIVKLP-EAFGLLTKLRLLDLTDCFQ 633 (1344)
Q Consensus 558 L~L~~~~i~~lp~~i~~L~~L~~L~L~~~-~i~~l--~~i~~L~~L~~L~l~~~~l~~lp-~~i~~L~~L~~L~l~~~~~ 633 (1344)
++.+++.+...|..+..+.+|+.|++.++ .++.+ ..|.++.+|+.|++++|.+..++ ..|..+++|++|++++| .
T Consensus 13 l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N-~ 91 (156)
T d2ifga3 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN-A 91 (156)
T ss_dssp EECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS-C
T ss_pred EEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCC-C
T ss_conf 985289976586002576565743168986644369212256666672162021247742011124554333322678-7
Q ss_pred CCCCCHHHHCCCCCCCEEECCCCC
Q ss_conf 232390443037768789820244
Q 000701 634 LKVIAPNVLSSLIRLEELYMRNCF 657 (1344)
Q Consensus 634 l~~~~~~~l~~L~~L~~L~l~~~~ 657 (1344)
++.+|.+.+..+ +|++|++++|.
T Consensus 92 l~~l~~~~~~~~-~l~~L~L~~Np 114 (156)
T d2ifga3 92 LESLSWKTVQGL-SLQELVLSGNP 114 (156)
T ss_dssp CSCCCSTTTCSC-CCCEEECCSSC
T ss_pred CCCCCHHHHCCC-CCCCCCCCCCC
T ss_conf 851574563353-21243357986
No 45
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.76 E-value=3.3e-08 Score=63.83 Aligned_cols=90 Identities=16% Similarity=0.064 Sum_probs=58.3
Q ss_pred CCCCCHHHHHCCCCCEEEEECCC-CCCCCC-CCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCEEECCCCCCCCCCHH
Q ss_conf 21256778813986529970798-888677-1111577986887588777772--1013543455354636878556744
Q 000701 541 EINISKSFFKEMRMLRVVGFSKM-QLSSLP-SSMDLLVNLQTLSLDQSMLGDI--AIIGKLKNLEILSMINSDIVKLPEA 616 (1344)
Q Consensus 541 ~~~l~~~~f~~l~~Lr~L~L~~~-~i~~lp-~~i~~L~~L~~L~L~~~~i~~l--~~i~~L~~L~~L~l~~~~l~~lp~~ 616 (1344)
..+.|..+ ..++.|+.|++.++ .++.++ ..|.++.+|+.|++++|.+..+ ..|..+.+|++|++++|.+..+|..
T Consensus 20 ~~~~p~~l-~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~ 98 (156)
T d2ifga3 20 ALDSLHHL-PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWK 98 (156)
T ss_dssp CCTTTTTS-CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCST
T ss_pred CCCCCCCC-CCCCCCCEEECCCCCCCCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHH
T ss_conf 76586002-57656574316898664436921225666667216202124774201112455433332267878515745
Q ss_pred HHCCCCCCEEECCCC
Q ss_conf 205574548804455
Q 000701 617 FGLLTKLRLLDLTDC 631 (1344)
Q Consensus 617 i~~L~~L~~L~l~~~ 631 (1344)
+-...+|++|+++++
T Consensus 99 ~~~~~~l~~L~L~~N 113 (156)
T d2ifga3 99 TVQGLSLQELVLSGN 113 (156)
T ss_dssp TTCSCCCCEEECCSS
T ss_pred HHCCCCCCCCCCCCC
T ss_conf 633532124335798
No 46
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=98.72 E-value=1.4e-06 Score=53.60 Aligned_cols=169 Identities=15% Similarity=0.139 Sum_probs=97.6
Q ss_pred CCCCCCHHHHHHHHHHHHH-----CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 6562120989999999987-----19973999991899948899999999984228998899999289999999999999
Q 000701 152 YEAFESRFSTLRDIRNALT-----NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIA 226 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~-----~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~ 226 (1344)
.+.++|-++.++.+..|+. ....+-+.++|++|+|||++|+.+++... ++ ...++.+.......+.. ++
T Consensus 8 ~~divGqe~~~~~l~~~i~~~~~~~~~~~~~L~~GPpGtGKT~lA~~la~~~~----~~-~~~~~~~~~~~~~~~~~-~~ 81 (238)
T d1in4a2 8 LDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQ----TN-IHVTSGPVLVKQGDMAA-IL 81 (238)
T ss_dssp GGGCCSCHHHHHHHHHHHHHHHHHTCCCCCEEEESSTTSSHHHHHHHHHHHHT----CC-EEEEETTTCCSHHHHHH-HH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCC----CC-CCCCCCCCCCCHHHHHH-HH
T ss_conf 99908959999999999997885388777489879999738899999985038----88-53325744224888999-98
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC---------CCCC-----------CCCCCCCCCCEEEEE
Q ss_conf 99535445331799999999999839819999929998532---------0112-----------676789998238999
Q 000701 227 EKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCLN---------LETV-----------GIPYGDDHKGCKILL 286 (1344)
Q Consensus 227 ~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~~---------~~~l-----------~~~l~~~~~~~~iiv 286 (1344)
... .++..+.+|+++.... .+.. ............+|.
T Consensus 82 ~~~----------------------~~~~~~~ide~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~ 139 (238)
T d1in4a2 82 TSL----------------------ERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVG 139 (238)
T ss_dssp HHC----------------------CTTCEEEEETGGGCCHHHHHHHHHHHHTSCCCC---------------CCCEEEE
T ss_pred HHH----------------------CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEE
T ss_conf 754----------------------3588247778988406777642140244145445437600244445788769999
Q ss_pred EE-CCHHHHH--HHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH
Q ss_conf 82-5867887--309999498469999999999999819998883039999999999299859999
Q 000701 287 TS-RDRSVLL--KMGSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIALT 349 (1344)
Q Consensus 287 Tt-R~~~v~~--~~~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPlai~ 349 (1344)
+| +...... .......+.+++.+.++...++...+...... ..+.....+++.++|.+-.+.
T Consensus 140 at~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~i~~~s~gd~R~ai 204 (238)
T d1in4a2 140 ATTRSGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVE-IEDAAAEMIAKRSRGTPRIAI 204 (238)
T ss_dssp EESCGGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCC-BCHHHHHHHHHTSTTCHHHHH
T ss_pred ECCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHCCCCHHHHH
T ss_conf 54787555543113300799844787787777777765301100-257999999996799899999
No 47
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=98.72 E-value=9.4e-08 Score=61.00 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=92.3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCCE-EEEEECCCCCCHHHHHHHHHH
Q ss_conf 56212098999999998719973999991899948899999999984228----9988-999992899999999999999
Q 000701 153 EAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERK----LFDQ-VVFSEVSQTPNIKDIQKEIAE 227 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~----~f~~-~~wv~~~~~~~~~~~~~~i~~ 227 (1344)
+..+||+++++++...|......-+.++|++|+|||+++..++.+..... ..+. ++.++.+ .+ ..
T Consensus 22 d~~igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~~------~L----iA 91 (195)
T d1jbka_ 22 DPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG------AL----VA 91 (195)
T ss_dssp CCCCSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECHH------HH----HT
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCCEEEEEEHH------HH----HC
T ss_conf 987280999999999995358887399835875447999999999980899978818569996699------98----64
Q ss_pred HHCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEEECCCCCCC---------CCCCCCCCCCCCCCEEEEEEECCHHHHHH-
Q ss_conf 95354453317999999999998-39819999929998532---------01126767899982389998258678873-
Q 000701 228 KLGLILHEETVSRRASRLYERLK-EEKKILVVLDNLWKCLN---------LETVGIPYGDDHKGCKILLTSRDRSVLLK- 296 (1344)
Q Consensus 228 ~l~~~~~~~~~~~~~~~l~~~l~-~~~~~LlVlDdv~~~~~---------~~~l~~~l~~~~~~~~iivTtR~~~v~~~- 296 (1344)
. . .......+....+.+.+. ...+.++++|++..... ...+..++.. ....++|.||..+.....
T Consensus 92 g--~-~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~-rg~l~~IgatT~eey~~~~ 167 (195)
T d1jbka_ 92 G--A-KYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA-RGELHCVGATTLDEYRQYI 167 (195)
T ss_dssp T--T-CSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCHHHHHHHHH-TTSCCEEEEECHHHHHHHT
T ss_pred C--C-CCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCCCHHHHHHHHHH-CCCCEEEECCCHHHHHHHH
T ss_conf 5--8-7407799999999998731798089972608998437877775238999999985-7995498518999999998
Q ss_pred ------HCCCCCEECCCCCHHHHHHHH
Q ss_conf ------099994984699999999999
Q 000701 297 ------MGSAPPFLIGVLNEEEAWRLF 317 (1344)
Q Consensus 297 ------~~~~~~~~l~~l~~~e~~~lf 317 (1344)
....+.+.++..+.+++..++
T Consensus 168 e~d~aL~rrF~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 168 EKDAALERRFQKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp TTCHHHHTTEEEEECCCCCHHHHHTTC
T ss_pred HCCHHHHHCCCEEECCCCCHHHHHHHH
T ss_conf 738899963987545898989999985
No 48
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.69 E-value=5.4e-08 Score=62.52 Aligned_cols=186 Identities=10% Similarity=0.034 Sum_probs=105.6
Q ss_pred CCCCCCHHHHHHHHHHHHHC-----------------CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 65621209899999999871-----------------9973999991899948899999999984228998899999289
Q 000701 152 YEAFESRFSTLRDIRNALTN-----------------ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ 214 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~~-----------------~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~ 214 (1344)
.+.++|.++.+++|.+|+.. +..+.+.++|++|+||||+|+.+++... ..+.+++.+.
T Consensus 13 ~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~-----~~~~~~~~~~ 87 (253)
T d1sxja2 13 LQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELG-----YDILEQNASD 87 (253)
T ss_dssp GGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTT-----CEEEEECTTS
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH-----HHHHCCCCCC
T ss_conf 99966989999999999996253002343232025788874499987999988899999999987-----5120134432
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-----CCCCCCCCCCCCCCEEEEEEEC
Q ss_conf 99999999999999535445331799999999999839819999929998532-----0112676789998238999825
Q 000701 215 TPNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCLN-----LETVGIPYGDDHKGCKILLTSR 289 (1344)
Q Consensus 215 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~~-----~~~l~~~l~~~~~~~~iivTtR 289 (1344)
..+...+... .+............... .......++..++++|+++.... +..+..... .... .+++|+.
T Consensus 88 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~vi~ide~~~~~~~~~~~~~~~~~~~~-~~~~-~ii~i~~ 162 (253)
T d1sxja2 88 VRSKTLLNAG-VKNALDNMSVVGYFKHN--EEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFCR-KTST-PLILICN 162 (253)
T ss_dssp CCCHHHHHHT-GGGGTTBCCSTTTTTC------CCSSTTSEEEEECSGGGCCTTSTTHHHHHHHHHH-HCSS-CEEEEES
T ss_pred CHHHHHHHHH-HHHHHHCCHHHHHHHHH--HHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHC-CCCC-CCCCCCC
T ss_conf 2116889999-98876312121013343--2014556651377763011111000134677765401-2342-2211135
Q ss_pred --CH-HHHHHHCCCCCEECCCCCHHHHHHHHHHHHC---CCCCCCCHHHHHHHHHHHHCCCH-HHHHHH
Q ss_conf --86-7887309999498469999999999999819---99888303999999999929985-999999
Q 000701 290 --DR-SVLLKMGSAPPFLIGVLNEEEAWRLFKMTAG---DDVEHRELNSTARNVAMACGGLP-IALTTI 351 (1344)
Q Consensus 290 --~~-~v~~~~~~~~~~~l~~l~~~e~~~lf~~~~~---~~~~~~~~~~~~~~i~~~~~glP-lai~~~ 351 (1344)
.. .+.........+++.+.+.++....+...+. -...+ +....|++.++|-. -|+..+
T Consensus 163 ~~~~~~~~~l~~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~----~~l~~i~~~s~GDiR~ai~~L 227 (253)
T d1sxja2 163 ERNLPKMRPFDRVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP----NVIDRLIQTTRGDIRQVINLL 227 (253)
T ss_dssp CTTSSTTGGGTTTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT----THHHHHHHHTTTCHHHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCH----HHHHHHHHHCCCCHHHHHHHH
T ss_conf 55521135324403653114531467889999999980999999----999999996797099999999
No 49
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=98.66 E-value=3.4e-07 Score=57.54 Aligned_cols=172 Identities=15% Similarity=0.170 Sum_probs=100.7
Q ss_pred CCCCCHHHHHHHHHHHHH------------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHH
Q ss_conf 562120989999999987------------19973999991899948899999999984228998899999289999999
Q 000701 153 EAFESRFSTLRDIRNALT------------NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKD 220 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~------------~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~ 220 (1344)
++++|-+..+++|.+.+. ....+.+.++|++|+|||++|+.+++..... .+.++.++-.+.
T Consensus 12 ~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~-----~~~i~~~~l~~~-- 84 (256)
T d1lv7a_ 12 ADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVP-----FFTISGSDFVEM-- 84 (256)
T ss_dssp GGSCSCHHHHHHTHHHHHHHHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCC-----EEEECSCSSTTS--
T ss_pred HHHHCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCC-----EEEEEHHHHHHC--
T ss_conf 9981639999999999999879999998699988867866899888228999999982998-----799886994260--
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC------------C----CCCCCCCCC--CCCCCE
Q ss_conf 9999999953544533179999999999983981999992999853------------2----011267678--999823
Q 000701 221 IQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL------------N----LETVGIPYG--DDHKGC 282 (1344)
Q Consensus 221 ~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~------------~----~~~l~~~l~--~~~~~~ 282 (1344)
..... ...+..+++...+..++++++||++... . +..+...+. ....+.
T Consensus 85 ------------~~g~~-~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v 151 (256)
T d1lv7a_ 85 ------------FVGVG-ASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGI 151 (256)
T ss_dssp ------------CCCCC-HHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCE
T ss_pred ------------CHHHH-HHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf ------------01078-99999999999975998999977566575678988887489999999999995387777998
Q ss_pred EEEEEECCHHHH-HHH----CCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
Q ss_conf 899982586788-730----9999498469999999999999819998883039999999999299859
Q 000701 283 KILLTSRDRSVL-LKM----GSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPI 346 (1344)
Q Consensus 283 ~iivTtR~~~v~-~~~----~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPl 346 (1344)
-||.||...... ..+ .-...+++.+.+.++..++++....+.....+. ....+++.+.|..-
T Consensus 152 ~vIatTn~~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~--~~~~la~~t~G~s~ 218 (256)
T d1lv7a_ 152 IVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDI--DAAIIARGTPGFSG 218 (256)
T ss_dssp EEEEEESCTTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTC--CHHHHHHTCTTCCH
T ss_pred EEEEECCCCCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHCCCCCH
T ss_conf 99980799310798576898787798779959999999999842599868656--99999986899899
No 50
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=98.65 E-value=2.4e-07 Score=58.51 Aligned_cols=177 Identities=14% Similarity=0.166 Sum_probs=99.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHH---C---------CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 88986562120989999999987---1---------99739999918999488999999999842289988999992899
Q 000701 148 SSTGYEAFESRFSTLRDIRNALT---N---------ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT 215 (1344)
Q Consensus 148 ~~~~~~~~~gR~~~~~~l~~~l~---~---------~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~ 215 (1344)
|....++++|-++.+++|.+.+. . ...+-+.++|+.|+|||++|+.+++..... .+.++.+
T Consensus 4 p~~~~~di~G~~~~k~~l~~~i~~l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~-----~~~i~~~-- 76 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVP-----FITASGS-- 76 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHHHHHHHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCC-----EEEEEHH--
T ss_pred CCCCHHHHCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCC-----EEEEEHH--
T ss_conf 997499971579999999999999879999997599988648876689888359999999873997-----7997869--
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC----------------CCCCCCCCCC--C
Q ss_conf 999999999999953544533179999999999983981999992999853----------------2011267678--9
Q 000701 216 PNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL----------------NLETVGIPYG--D 277 (1344)
Q Consensus 216 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~----------------~~~~l~~~l~--~ 277 (1344)
.+... ... .....+..+++......++++++||++... .+..+...+. .
T Consensus 77 ----~l~~~--------~~g-~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~ 143 (247)
T d1ixza_ 77 ----DFVEM--------FVG-VGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE 143 (247)
T ss_dssp ----HHHHS--------CTT-HHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCC
T ss_pred ----HHHHC--------CCC-HHHHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf ----96462--------453-89999999999999769979999773664746789988875899999999999963877
Q ss_pred CCCCEEEEEEECCHH-HHHHH----CCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
Q ss_conf 998238999825867-88730----9999498469999999999999819998883039999999999299859
Q 000701 278 DHKGCKILLTSRDRS-VLLKM----GSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPI 346 (1344)
Q Consensus 278 ~~~~~~iivTtR~~~-v~~~~----~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPl 346 (1344)
...+.-||.||.... +...+ .-...+++.+.+.++..++++..........+. ....+++.+.|..-
T Consensus 144 ~~~~vivi~tTn~~~~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~--~~~~la~~t~g~s~ 215 (247)
T d1ixza_ 144 KDTAIVVMAATNRPDILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDV--DLALLAKRTPGFVG 215 (247)
T ss_dssp TTCCEEEEEEESCGGGSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTC--CHHHHHHTCTTCCH
T ss_pred CCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHCCCCCH
T ss_conf 7899899980799400699675898785799979969999999999875065776546--89999977889889
No 51
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.63 E-value=4.4e-07 Score=56.81 Aligned_cols=172 Identities=13% Similarity=0.139 Sum_probs=101.4
Q ss_pred CCCCCHHHHHHHHHHHHH----C---------CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
Q ss_conf 562120989999999987----1---------997399999189994889999999998422899889999928999999
Q 000701 153 EAFESRFSTLRDIRNALT----N---------ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIK 219 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~----~---------~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~ 219 (1344)
+.+.|-+..+++|.+.+. . ...+-+.++|++|+|||++|+.+++..... .+.+..+.
T Consensus 4 ~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~-----~~~i~~~~----- 73 (258)
T d1e32a2 4 DDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF-----FFLINGPE----- 73 (258)
T ss_dssp GGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCE-----EEEECHHH-----
T ss_pred HHHCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCE-----EEEEECHH-----
T ss_conf 66310999999999999988319999986799988646876699888308999999874883-----79997304-----
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC-------------CCCCCC--CCCCCCCCEEE
Q ss_conf 999999999535445331799999999999839819999929998532-------------011267--67899982389
Q 000701 220 DIQKEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCLN-------------LETVGI--PYGDDHKGCKI 284 (1344)
Q Consensus 220 ~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~~-------------~~~l~~--~l~~~~~~~~i 284 (1344)
+. ..... .....+..+++......++++++||++.... ...+.. .......+.-|
T Consensus 74 -l~--------~~~~g-~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 143 (258)
T d1e32a2 74 -IM--------SKLAG-ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIV 143 (258)
T ss_dssp -HT--------TSCTT-HHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEE
T ss_pred -HC--------CCCCC-CHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
T ss_conf -30--------25456-178888999999986499499852111322578877770689998775001101234688117
Q ss_pred EEEECCHHHHH-HH----CCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
Q ss_conf 99825867887-30----9999498469999999999999819998883039999999999299859
Q 000701 285 LLTSRDRSVLL-KM----GSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPI 346 (1344)
Q Consensus 285 ivTtR~~~v~~-~~----~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPl 346 (1344)
|.||....-.. .. .....+++...+.++...+|+..........+.. ...|++.+.|.-.
T Consensus 144 i~tTn~~~~ld~al~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~--~~~la~~t~G~s~ 208 (258)
T d1e32a2 144 MAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD--LEQVANETHGHVG 208 (258)
T ss_dssp EEEESCGGGSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCC--HHHHHHHCTTCCH
T ss_pred EEECCCCCCCCHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCCC--HHHHHHCCCCCCH
T ss_conf 9757993102524542463023237899998899987322045763345530--3444420667789
No 52
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=98.61 E-value=3.6e-06 Score=51.16 Aligned_cols=170 Identities=15% Similarity=0.107 Sum_probs=96.5
Q ss_pred CCCCCCHHHHHHHHHHHHHC-----CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 65621209899999999871-----9973999991899948899999999984228998899999289999999999999
Q 000701 152 YEAFESRFSTLRDIRNALTN-----ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIA 226 (1344)
Q Consensus 152 ~~~~~gR~~~~~~l~~~l~~-----~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~ 226 (1344)
.+.++|-++.++++..++.. ...+-+.++|++|+||||+|+.+++..... ..+.+.+...........+.
T Consensus 8 ~ddivGq~~~~~~L~~~i~~~~~~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 82 (239)
T d1ixsb2 8 LDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVN-----LRVTSGPAIEKPGDLAAILA 82 (239)
T ss_dssp GGGSCSCHHHHHHHHHHHHHHTTSSSCCCCEEEECCTTSCHHHHHHHHHHHHTCC-----EEEEETTTCCSHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----EEECCCCCCCCCHHHHHHHH
T ss_conf 8894898999999999999787358888738988979987888999999984987-----47546875343214689988
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC---------CCC----CCC-------CCCCCCCCEEEEE
Q ss_conf 99535445331799999999999839819999929998532---------011----267-------6789998238999
Q 000701 227 EKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCLN---------LET----VGI-------PYGDDHKGCKILL 286 (1344)
Q Consensus 227 ~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~~---------~~~----l~~-------~l~~~~~~~~iiv 286 (1344)
..+ +.+..+++|+++.... .+. ... ......+...++.
T Consensus 83 ~~~----------------------~~~~i~~iDe~~~~~~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 140 (239)
T d1ixsb2 83 NSL----------------------EEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIG 140 (239)
T ss_dssp TTC----------------------CTTCEEEEETGGGCCHHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEE
T ss_pred HHC----------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEE
T ss_conf 510----------------------3887344311001104478750012433321211046556543346899779996
Q ss_pred -EECCHHH--HHHHCCCCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH
Q ss_conf -8258678--87309999498469999999999999819998883039999999999299859999
Q 000701 287 -TSRDRSV--LLKMGSAPPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIALT 349 (1344)
Q Consensus 287 -TtR~~~v--~~~~~~~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPlai~ 349 (1344)
|++.... +........+.+.+.+.++...+....+..... ....+....|++.++|.+-.+.
T Consensus 141 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i-~~~~~~l~~ia~~s~gd~R~a~ 205 (239)
T d1ixsb2 141 ATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGV-RITEEAALEIGRRSRGTMRVAK 205 (239)
T ss_dssp EESCCSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCC-CBCHHHHHHHHHHTTSSHHHHH
T ss_pred ECCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHCCCCHHHHH
T ss_conf 3068333441010122145675205745555788999998487-6526789999997699999999
No 53
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.61 E-value=1.2e-07 Score=60.33 Aligned_cols=37 Identities=11% Similarity=0.133 Sum_probs=17.7
Q ss_pred HCCCCCEEEEECCCCCCC-----CCCCCCCCCCCCEEECCCC
Q ss_conf 139865299707988886-----7711115779868875887
Q 000701 550 KEMRMLRVVGFSKMQLSS-----LPSSMDLLVNLQTLSLDQS 586 (1344)
Q Consensus 550 ~~l~~Lr~L~L~~~~i~~-----lp~~i~~L~~L~~L~L~~~ 586 (1344)
.....|+.|+|++|.+.. +-..+...++|+.++++++
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~ 69 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDI 69 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSC
T ss_pred HHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 638997889784983778999999999985899888888777
No 54
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=98.59 E-value=3.9e-06 Score=50.88 Aligned_cols=179 Identities=9% Similarity=0.013 Sum_probs=100.3
Q ss_pred CHHHHHHHHHHHHHCCCC-EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC--
Q ss_conf 209899999999871997-39999918999488999999999842289988999992899999999999999953544--
Q 000701 157 SRFSTLRDIRNALTNANA-GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLIL-- 233 (1344)
Q Consensus 157 gR~~~~~~l~~~l~~~~~-~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~-- 233 (1344)
.-+...+++.+.+..++. +.+.++|+.|+||||+|+.+++..-...... +-.+.. ..-.+.+........
T Consensus 6 w~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~---~~~~~~----~~~~~~i~~~~~~~~~~ 78 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQG---HKSCGH----CRGCQLMQAGTHPDYYT 78 (207)
T ss_dssp GGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBT---TBCCSC----SHHHHHHHHTCCTTEEE
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCC---CCCCCC----CCHHHHHHHCCCCCCCH
T ss_conf 21999999999998599673798889998759999999998210101232---122334----20155654303431101
Q ss_pred ------CCCCHHHHHHHHHHHHH----CCCEEEEEEECCCCCC--CCCCCCCCCCCCCCCEEEEEEECCH-HHHHHH-CC
Q ss_conf ------53317999999999998----3981999992999853--2011267678999823899982586-788730-99
Q 000701 234 ------HEETVSRRASRLYERLK----EEKKILVVLDNLWKCL--NLETVGIPYGDDHKGCKILLTSRDR-SVLLKM-GS 299 (1344)
Q Consensus 234 ------~~~~~~~~~~~l~~~l~----~~~~~LlVlDdv~~~~--~~~~l~~~l~~~~~~~~iivTtR~~-~v~~~~-~~ 299 (1344)
...-..+.+..+.+.+. .+++-++|+|+++... ....+...+-....+.++|+||++. .+.... .-
T Consensus 79 ~~~~~~~~~i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~~~a~n~Llk~lEep~~~~~fIl~t~~~~~ll~tI~SR 158 (207)
T d1a5ta2 79 LAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSR 158 (207)
T ss_dssp ECCCTTCSSBCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGGSCHHHHTT
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCE
T ss_conf 23431345333211467765321100357640477313442000014999999985011110455306865510320021
Q ss_pred CCCEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHH
Q ss_conf 9949846999999999999981999888303999999999929985999
Q 000701 300 APPFLIGVLNEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIAL 348 (1344)
Q Consensus 300 ~~~~~l~~l~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPlai 348 (1344)
...+.+.+++.++....+.+...- .++.+..|++.++|.|..+
T Consensus 159 c~~i~~~~~~~~~~~~~L~~~~~~------~~~~~~~i~~~s~Gs~r~a 201 (207)
T d1a5ta2 159 CRLHYLAPPPEQYAVTWLSREVTM------SQDALLAALRLSAGSPGAA 201 (207)
T ss_dssp SEEEECCCCCHHHHHHHHHHHCCC------CHHHHHHHHHHTTTCHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHCCCC------CHHHHHHHHHHCCCCHHHH
T ss_conf 578826899999999999974899------9999999999769999999
No 55
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=98.49 E-value=1.1e-05 Score=48.02 Aligned_cols=149 Identities=13% Similarity=0.122 Sum_probs=76.1
Q ss_pred CCCCCHHHHHHHHHHHHH-------C---CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHH
Q ss_conf 562120989999999987-------1---997399999189994889999999998422899889999928999999999
Q 000701 153 EAFESRFSTLRDIRNALT-------N---ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQ 222 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~-------~---~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~ 222 (1344)
.+++|+.+.++.+.+-.. . ...+-|.++|++|+|||++|+.+++..... .+.++.+....
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~-----~~~i~~~~~~~----- 78 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFP-----FIKICSPDKMI----- 78 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHHHHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCS-----EEEEECGGGCT-----
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCC-----CCCCCCCCCCC-----
T ss_conf 69847687999999999999999863688998079988969998899999986201002-----33345652235-----
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCC------------CCCCCC---CCCCCCCCEEEEEE
Q ss_conf 999999535445331799999999999839819999929998532------------011267---67899982389998
Q 000701 223 KEIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCLN------------LETVGI---PYGDDHKGCKILLT 287 (1344)
Q Consensus 223 ~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~~------------~~~l~~---~l~~~~~~~~iivT 287 (1344)
..........+..+++...+..++++++|+++.... +..+.. .......+..||.|
T Consensus 79 ---------g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~v~vi~t 149 (246)
T d1d2na_ 79 ---------GFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGT 149 (246)
T ss_dssp ---------TCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTTBCCHHHHHHHHHHTTCCCSTTCEEEEEEE
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC
T ss_conf ---------65421122444445655553242223310256676513454412478999999986077765450145532
Q ss_pred ECCHHHHHHH---C-CCCCEECCCCC-HHHHHHHHHHH
Q ss_conf 2586788730---9-99949846999-99999999998
Q 000701 288 SRDRSVLLKM---G-SAPPFLIGVLN-EEEAWRLFKMT 320 (1344)
Q Consensus 288 tR~~~v~~~~---~-~~~~~~l~~l~-~~e~~~lf~~~ 320 (1344)
|......... + ....+.+..++ .++-++.+...
T Consensus 150 Tn~~~~ld~~~~~~rF~~~i~~P~~~~r~~il~~l~~~ 187 (246)
T d1d2na_ 150 TSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELL 187 (246)
T ss_dssp ESCHHHHHHTTCTTTSSEEEECCCEEEHHHHHHHHHHH
T ss_pred CCCHHHCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf 48832256102018663388559910599999999742
No 56
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=98.45 E-value=2.7e-06 Score=51.95 Aligned_cols=149 Identities=19% Similarity=0.227 Sum_probs=86.1
Q ss_pred CCCHHH--HHHHHHHHHHCCC--CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 212098--9999999987199--739999918999488999999999842289988999992899999999999999953
Q 000701 155 FESRFS--TLRDIRNALTNAN--AGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLG 230 (1344)
Q Consensus 155 ~~gR~~--~~~~l~~~l~~~~--~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~ 230 (1344)
++|... ....+.++....+ ...+.|+|+.|+|||.|++.+++....+ ...+++++. .++...+...+.
T Consensus 13 ~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~ 84 (213)
T d1l8qa2 13 IVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR--GYRVIYSSA------DDFAQAMVEHLK 84 (213)
T ss_dssp CCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHT--TCCEEEEEH------HHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC--CCCEEEECH------HHHHHHHHHHHH
T ss_conf 377749999999999986768778857998889983999999999874467--650488443------787999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCC---CCCCC-CCCCCCC-CCCCEEEEEEECCH---------HHHHH
Q ss_conf 54453317999999999998398199999299985---32011-2676789-99823899982586---------78873
Q 000701 231 LILHEETVSRRASRLYERLKEEKKILVVLDNLWKC---LNLET-VGIPYGD-DHKGCKILLTSRDR---------SVLLK 296 (1344)
Q Consensus 231 ~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~---~~~~~-l~~~l~~-~~~~~~iivTtR~~---------~v~~~ 296 (1344)
.. ....+.+.+ ...-++++||++.. ..|+. +...+.. ...|.+||+|++.. ++..+
T Consensus 85 ~~--------~~~~~~~~~--~~~dll~iDDi~~i~~~~~~~~~lf~lin~~~~~~~~iiits~~~p~~l~~~~~dL~SR 154 (213)
T d1l8qa2 85 KG--------TINEFRNMY--KSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSR 154 (213)
T ss_dssp HT--------CHHHHHHHH--HTCSEEEEECGGGGTTCHHHHHHHHHHHHHHHHTTCEEEEEESSCGGGCTTSCHHHHHH
T ss_pred CC--------CHHHHHHHH--HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHCCCCCHHHHHH
T ss_conf 16--------626678987--62130101126550586577889999999876316638995487510013432678888
Q ss_pred HCCCCCEECCCCCHHHHHHHHHHHHC
Q ss_conf 09999498469999999999999819
Q 000701 297 MGSAPPFLIGVLNEEEAWRLFKMTAG 322 (1344)
Q Consensus 297 ~~~~~~~~l~~l~~~e~~~lf~~~~~ 322 (1344)
......++++ .++++..+++++.+.
T Consensus 155 L~~g~~~~i~-p~d~~~~~iL~~~a~ 179 (213)
T d1l8qa2 155 FEGGILVEIE-LDNKTRFKIIKEKLK 179 (213)
T ss_dssp HHTSEEEECC-CCHHHHHHHHHHHHH
T ss_pred HHCCEEEEEC-CCCHHHHHHHHHHHH
T ss_conf 6185689978-882799999999999
No 57
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.25 E-value=4.2e-06 Score=50.72 Aligned_cols=150 Identities=13% Similarity=0.168 Sum_probs=86.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 97399999189994889999999998422899889999928999999999999999535445331799999999999839
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEE 252 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~ 252 (1344)
..+-|.++|+.|.|||++|+.++...... . +.++ ...+. + ... .........++......
T Consensus 40 ~~~giLL~Gp~GtGKT~l~~ala~~~~~~-----~--~~~~----~~~l~-------~-~~~-~~~~~~l~~~f~~A~~~ 99 (265)
T d1r7ra3 40 PSKGVLFYGPPGCGKTLLAKAIANECQAN-----F--ISIK----GPELL-------T-MWF-GESEANVREIFDKARQA 99 (265)
T ss_dssp CCCEEEEBCCTTSSHHHHHHHHHHHTTCE-----E--EEEC----HHHHH-------T-SCT-TTHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-----E--EEEE----HHHHH-------H-CCC-CCHHHHHHHHHHHHHHC
T ss_conf 88757887899876304778878771894-----7--9988----79952-------5-316-51589999999999863
Q ss_pred CEEEEEEECCCCCCC----------------CCCCCCCCC--CCCCCEEEEEEECCHH-HHHHH----CCCCCEECCCCC
Q ss_conf 819999929998532----------------011267678--9998238999825867-88730----999949846999
Q 000701 253 KKILVVLDNLWKCLN----------------LETVGIPYG--DDHKGCKILLTSRDRS-VLLKM----GSAPPFLIGVLN 309 (1344)
Q Consensus 253 ~~~LlVlDdv~~~~~----------------~~~l~~~l~--~~~~~~~iivTtR~~~-v~~~~----~~~~~~~l~~l~ 309 (1344)
.++++++||++.... ...+...+. ....+..||.||...+ +...+ .....+++.+.+
T Consensus 100 ~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~ld~al~r~gRf~~~i~~~~p~ 179 (265)
T d1r7ra3 100 APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 179 (265)
T ss_dssp CSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTTSCGGGSSTTSEEEEECCCCC
T ss_pred CCCCEEHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCHHHHCCCCCCEEEEECCHH
T ss_conf 98435687546324557876788737999999999999628677799899991799222799780787764799956607
Q ss_pred HHHHHHHHHHHHCCCCC--CCCHHHHHHHHHHHHCCCHH
Q ss_conf 99999999998199988--83039999999999299859
Q 000701 310 EEEAWRLFKMTAGDDVE--HRELNSTARNVAMACGGLPI 346 (1344)
Q Consensus 310 ~~e~~~lf~~~~~~~~~--~~~~~~~~~~i~~~~~glPl 346 (1344)
.++-.++|+....+... ..+ ...+++++.|...
T Consensus 180 ~~~R~~il~~~l~~~~~~~~~~----l~~la~~t~g~s~ 214 (265)
T d1r7ra3 180 EKSRVAILKANLRKSPVAKDVD----LEFLAKMTNGFSG 214 (265)
T ss_dssp CHHHHHHHHHHTTCC----CCC----CHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCCCHHHHH----HHHHHHCCCCCCH
T ss_conf 8889999999960577102436----8999825899999
No 58
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.23 E-value=1.7e-06 Score=53.15 Aligned_cols=18 Identities=6% Similarity=-0.018 Sum_probs=7.2
Q ss_pred CCCCCCCCCCEEECCCCC
Q ss_conf 111157798688758877
Q 000701 570 SSMDLLVNLQTLSLDQSM 587 (1344)
Q Consensus 570 ~~i~~L~~L~~L~L~~~~ 587 (1344)
..+.+...|+.|+|++|.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~ 42 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNT 42 (344)
T ss_dssp HHHHHCSCCCEEECTTSE
T ss_pred HHHHHCCCCCEEECCCCC
T ss_conf 999638997889784983
No 59
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.77 E-value=5.5e-06 Score=49.95 Aligned_cols=84 Identities=21% Similarity=0.110 Sum_probs=52.0
Q ss_pred CCHHHHHCCCCCEEEEECCCCCCCCC---CCCCCCCCCCEEECCCCCCCCCCCC--CCCCCCCEEECCCCCCCCCCH---
Q ss_conf 56778813986529970798888677---1111577986887588777772101--354345535463687855674---
Q 000701 544 ISKSFFKEMRMLRVVGFSKMQLSSLP---SSMDLLVNLQTLSLDQSMLGDIAII--GKLKNLEILSMINSDIVKLPE--- 615 (1344)
Q Consensus 544 l~~~~f~~l~~Lr~L~L~~~~i~~lp---~~i~~L~~L~~L~L~~~~i~~l~~i--~~L~~L~~L~l~~~~l~~lp~--- 615 (1344)
....++..++.|++|++++|.|+.++ ..+..+++|++|++++|.+++++.+ .+..+|+.|++.+|.+.....
T Consensus 56 ~l~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~ 135 (162)
T d1koha1 56 TLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQS 135 (162)
T ss_dssp HHHHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHH
T ss_pred HHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCH
T ss_conf 60788974878788637776666773158898658856100043572134234422203310426648997676766615
Q ss_pred -----HHHCCCCCCEEE
Q ss_conf -----420557454880
Q 000701 616 -----AFGLLTKLRLLD 627 (1344)
Q Consensus 616 -----~i~~L~~L~~L~ 627 (1344)
.+..+++|+.||
T Consensus 136 ~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 136 TYISAIRERFPKLLRLD 152 (162)
T ss_dssp HHHHHHHTTSTTCCEET
T ss_pred HHHHHHHHHCCCCCEEC
T ss_conf 69999999889978799
No 60
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.70 E-value=0.00025 Score=39.58 Aligned_cols=130 Identities=13% Similarity=0.076 Sum_probs=73.3
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEECC-CCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999871997399999189994889999999998422--899889999928-999999999999999535445331
Q 000701 161 TLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKER--KLFDQVVFSEVS-QTPNIKDIQKEIAEKLGLILHEET 237 (1344)
Q Consensus 161 ~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~--~~f~~~~wv~~~-~~~~~~~~~~~i~~~l~~~~~~~~ 237 (1344)
+++.+..++..+..+.+.++|+.|.|||++|..+.+..... .|.| +.++... ....++++ +.+.+.+.....
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D-~~~i~~~~~~I~Id~I-R~i~~~~~~~~~--- 76 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASD-VLEIDPEGENIGIDDI-RTIKDFLNYSPE--- 76 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTT-EEEECCSSSCBCHHHH-HHHHHHHTSCCS---
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC-EEEEECCCCCCCHHHH-HHHHHHHHHCCC---
T ss_conf 78999999966998559988989988899999999998434567998-8998077678998999-999999961754---
Q ss_pred HHHHHHHHHHHHHCCCEEEEEEECCCCC--CCCCCCCCCCCCCCCCEEEE-EEECCHHHHHHH-CCCCCEECCCC
Q ss_conf 7999999999998398199999299985--32011267678999823899-982586788730-99994984699
Q 000701 238 VSRRASRLYERLKEEKKILVVLDNLWKC--LNLETVGIPYGDDHKGCKIL-LTSRDRSVLLKM-GSAPPFLIGVL 308 (1344)
Q Consensus 238 ~~~~~~~l~~~l~~~~~~LlVlDdv~~~--~~~~~l~~~l~~~~~~~~ii-vTtR~~~v~~~~-~~~~~~~l~~l 308 (1344)
.+++-++|+|+++.. .....+...+-.-..+..++ +|++...+.... .-...+.+.+.
T Consensus 77 -------------~~~~KviIId~ad~l~~~aqNaLLK~LEEPp~~t~fiLit~~~~~ll~TI~SRC~~i~~~~p 138 (198)
T d2gnoa2 77 -------------LYTRKYVIVHDCERMTQQAANAFLKALEEPPEYAVIVLNTRRWHYLLPTIKSRVFRVVVNVP 138 (198)
T ss_dssp -------------SSSSEEEEETTGGGBCHHHHHHTHHHHHSCCTTEEEEEEESCGGGSCHHHHTTSEEEECCCC
T ss_pred -------------CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHCHHHHHCCEEEEECCCC
T ss_conf -------------58987999947310366666478887737898852222069956687887352277767993
No 61
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=97.65 E-value=7.3e-05 Score=42.97 Aligned_cols=129 Identities=12% Similarity=0.146 Sum_probs=69.4
Q ss_pred CCCCCHHHHHHHHHHHHH-------C--CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHH
Q ss_conf 562120989999999987-------1--9973999991899948899999999984228998899999289999999999
Q 000701 153 EAFESRFSTLRDIRNALT-------N--ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQK 223 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~-------~--~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~ 223 (1344)
..++|-++.++.+...+. + ....++.++|+.|+|||.||+.++.... ...+-++.+.-.+...+
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~-----~~~i~~d~s~~~~~~~~-- 94 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG-----IELLRFDMSEYMERHTV-- 94 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHT-----CEEEEEEGGGCSSSSCC--
T ss_pred CEECCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC-----CCEEEECCCCCCCHHHH--
T ss_conf 80648599999999999999726788888765899977875006999999986336-----77067415444554466--
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC--CCCCCCCCC-----CC------CCCCEEEEEEECC
Q ss_conf 9999953544533179999999999983981999992999853--201126767-----89------9982389998258
Q 000701 224 EIAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKCL--NLETVGIPY-----GD------DHKGCKILLTSRD 290 (1344)
Q Consensus 224 ~i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~~--~~~~l~~~l-----~~------~~~~~~iivTtR~ 290 (1344)
.+-++...... .......+...+.+.....++||+++... .+..+...+ .+ ....+.+|.||..
T Consensus 95 --~~l~g~~~gy~-g~~~~~~l~~~~~~~~~~vvl~DeieKa~~~V~~~lLqild~G~ltd~~Gr~vdf~n~iiI~Tsni 171 (315)
T d1r6bx3 95 --SRLIGAPPGYV-GFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNA 171 (315)
T ss_dssp --SSSCCCCSCSH-HHHHTTHHHHHHHHCSSEEEEEETGGGSCHHHHHHHHHHHHHSEEEETTTEEEECTTEEEEEEECS
T ss_pred --HHHCCCCCCCC-CCCCCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEECCCH
T ss_conf --65214678750-114687033777738543022122230163376656776214602588997268632588841440
Q ss_pred H
Q ss_conf 6
Q 000701 291 R 291 (1344)
Q Consensus 291 ~ 291 (1344)
.
T Consensus 172 g 172 (315)
T d1r6bx3 172 G 172 (315)
T ss_dssp S
T ss_pred H
T ss_conf 1
No 62
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=97.63 E-value=5.1e-05 Score=43.94 Aligned_cols=105 Identities=17% Similarity=0.277 Sum_probs=59.5
Q ss_pred CCCCHHHHHHHHHHHHH-------CCC--CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHH
Q ss_conf 62120989999999987-------199--739999918999488999999999842289988999992899999999999
Q 000701 154 AFESRFSTLRDIRNALT-------NAN--AGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKE 224 (1344)
Q Consensus 154 ~~~gR~~~~~~l~~~l~-------~~~--~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~ 224 (1344)
.++|.++.++.+...+. +++ ..++.++|+.|+|||.+|+.++...-.. -...+-++.+.-.+...+.+-
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~--~~~~~~~~~~~~~~~~~~~~L 101 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDT--EEAMIRIDMTEYMEKHAVSRL 101 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSS--GGGEEEECTTTCCSSGGGGGC
T ss_pred EEECHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCCCCCCHHHHHH
T ss_conf 270879999999999999865789988876699997888624899999999983588--753488731554542156651
Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
Q ss_conf 99995354453317999999999998398199999299985
Q 000701 225 IAEKLGLILHEETVSRRASRLYERLKEEKKILVVLDNLWKC 265 (1344)
Q Consensus 225 i~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~LlVlDdv~~~ 265 (1344)
+...-|. .. ......+.+.+.+....+++||+++..
T Consensus 102 ~g~~~gy----vG-~~~~~~l~~~~~~~p~~Vvl~DEieK~ 137 (315)
T d1qvra3 102 IGAPPGY----VG-YEEGGQLTEAVRRRPYSVILFDEIEKA 137 (315)
T ss_dssp -------------------CHHHHHHHCSSEEEEESSGGGS
T ss_pred CCCCCCC----CC-CCCCCHHHHHHHHCCCCEEEEEHHHHC
T ss_conf 4899987----67-466784899998499837997147540
No 63
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.42 E-value=0.0021 Score=33.84 Aligned_cols=85 Identities=21% Similarity=0.248 Sum_probs=59.0
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC------CCHHHHHHHHH
Q ss_conf 973999991899948899999999984228998899999289999999999999995354453------31799999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHE------ETVSRRASRLY 246 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 246 (1344)
..+++-+.|+.|.|||++|.+++...... -..++|++.-..++.+. ++.+|...+. ...++.. .+.
T Consensus 59 ~g~i~e~~G~~~~GKT~l~l~~~~~~q~~--g~~~vyIDtE~~~~~e~-----a~~~GvD~d~il~~~~~~~E~~~-~~~ 130 (269)
T d1mo6a1 59 RGRVIEIYGPESSGKTTVALHAVANAQAA--GGVAAFIDAEHALDPDY-----AKKLGVDTDSLLVSQPDTGEQAL-EIA 130 (269)
T ss_dssp SSSEEEEECSSSSSHHHHHHHHHHHHHHT--TCEEEEEESSCCCCHHH-----HHHHTCCGGGCEEECCSSHHHHH-HHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCHHH-----HHHHCCCHHHEEEECCCCHHHHH-HHH
T ss_conf 63369996488748899999999987548--98899998976679999-----99809988995896699899999-999
Q ss_pred HHHH-CCCEEEEEEECCCCC
Q ss_conf 9998-398199999299985
Q 000701 247 ERLK-EEKKILVVLDNLWKC 265 (1344)
Q Consensus 247 ~~l~-~~~~~LlVlDdv~~~ 265 (1344)
+.+. +++.-|+|+|.+...
T Consensus 131 ~~l~~~~~~~liIiDSi~al 150 (269)
T d1mo6a1 131 DMLIRSGALDIVVIDSVAAL 150 (269)
T ss_dssp HHHHHTTCEEEEEEECSTTC
T ss_pred HHHHHCCCCCEEEEECCCCC
T ss_conf 99985599878999330245
No 64
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.37 E-value=1e-05 Score=48.34 Aligned_cols=41 Identities=24% Similarity=0.356 Sum_probs=15.4
Q ss_pred CCCCCCEEECCCCCCCCC----CCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 577986887588777772----10135434553546368785567
Q 000701 574 LLVNLQTLSLDQSMLGDI----AIIGKLKNLEILSMINSDIVKLP 614 (1344)
Q Consensus 574 ~L~~L~~L~L~~~~i~~l----~~i~~L~~L~~L~l~~~~l~~lp 614 (1344)
++.+|++|++++|.+..+ ..+..+++|++|++++|.+..++
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~ 107 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER 107 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGG
T ss_pred HCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCH
T ss_conf 487878863777666677315889865885610004357213423
No 65
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.27 E-value=0.002 Score=34.01 Aligned_cols=85 Identities=25% Similarity=0.285 Sum_probs=59.0
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC------CCHHHHHHHHH
Q ss_conf 973999991899948899999999984228998899999289999999999999995354453------31799999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHE------ETVSRRASRLY 246 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 246 (1344)
..+++-|.|+.|.|||++|.+++....... ..++|++.-..++.+ +++.+|...+. .+.++.. .+.
T Consensus 56 ~g~itei~G~~~sGKT~l~l~~~~~aqk~g--~~v~yiDtE~~~~~~-----~a~~~Gvd~d~i~~~~~~~~E~~~-~~~ 127 (268)
T d1xp8a1 56 RGRITEIYGPESGGKTTLALAIVAQAQKAG--GTCAFIDAEHALDPV-----YARALGVNTDELLVSQPDNGEQAL-EIM 127 (268)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHTT--CCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHH-HHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCHH-----HHHHHCCCCHHEEEECCCCHHHHH-HHH
T ss_conf 754789805876522799999999997079--989999887658999-----999828981237997489999999-999
Q ss_pred HHHH-CCCEEEEEEECCCCC
Q ss_conf 9998-398199999299985
Q 000701 247 ERLK-EEKKILVVLDNLWKC 265 (1344)
Q Consensus 247 ~~l~-~~~~~LlVlDdv~~~ 265 (1344)
+.+. +++.-|+|+|-+...
T Consensus 128 ~~l~~~~~~~liIiDSi~al 147 (268)
T d1xp8a1 128 ELLVRSGAIDVVVVDSVAAL 147 (268)
T ss_dssp HHHHTTTCCSEEEEECTTTC
T ss_pred HHHHHCCCCCEEEEECCCCC
T ss_conf 99986589719999454545
No 66
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.11 E-value=0.0036 Score=32.39 Aligned_cols=84 Identities=23% Similarity=0.300 Sum_probs=55.9
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCC------CCHHHHHHHHH
Q ss_conf 973999991899948899999999984228998899999289999999999999995354453------31799999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHE------ETVSRRASRLY 246 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~ 246 (1344)
..+++-|.|+.|.|||++|.+++...... -..++|++.-..++.. .++.+|...+. ...++..+ +.
T Consensus 53 ~g~itei~G~~gsGKTtl~l~~~~~~q~~--g~~~vyidtE~~~~~~-----~a~~~Gvd~d~v~~~~~~~~E~~~~-~i 124 (263)
T d1u94a1 53 MGRIVEIYGPESSGKTTLTLQVIAAAQRE--GKTCAFIDAEHALDPI-----YARKLGVDIDNLLCSQPDTGEQALE-IC 124 (263)
T ss_dssp TTSEEEEECSTTSSHHHHHHHHHHHHHHT--TCCEEEEESSCCCCHH-----HHHHTTCCGGGCEEECCSSHHHHHH-HH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHCC--CCEEEEECCCCCCCHH-----HHHHHCCCHHHEEEECCCCHHHHHH-HH
T ss_conf 73589980577747899999999998708--9879998654454899-----9998399879979962898999999-99
Q ss_pred HHHH-CCCEEEEEEECCCC
Q ss_conf 9998-39819999929998
Q 000701 247 ERLK-EEKKILVVLDNLWK 264 (1344)
Q Consensus 247 ~~l~-~~~~~LlVlDdv~~ 264 (1344)
+.+. .++.-|+|+|.+..
T Consensus 125 ~~l~~~~~~~liViDSi~a 143 (263)
T d1u94a1 125 DALARSGAVDVIVVDSVAA 143 (263)
T ss_dssp HHHHHHTCCSEEEEECGGG
T ss_pred HHHHHCCCCCEEEEECCCC
T ss_conf 9998549998999988655
No 67
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.09 E-value=0.0035 Score=32.49 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=44.5
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC-CCCHHHHHHHHHHHHCCCCC
Q ss_conf 9973999991899948899999999984228998899999289-99999999999999535445
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ-TPNIKDIQKEIAEKLGLILH 234 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~-~~~~~~~~~~i~~~l~~~~~ 234 (1344)
++.++|.++|+.|+||||-+.+++.....+. ..+..++... .....+.++..++.++.+..
T Consensus 4 ~~~~vi~lvGptGvGKTTTiaKLA~~~~~~g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~ 65 (207)
T d1okkd2 4 PKGRVVLVVGVNGVGKTTTIAKLGRYYQNLG--KKVMFCAGDTFRAAGGTQLSEWGKRLSIPVI 65 (207)
T ss_dssp CSSSEEEEECSTTSSHHHHHHHHHHHHHTTT--CCEEEECCCCSSTTHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCCHHHHHHCCCCCCCEEE
T ss_conf 9977999989999988999999999999779--9079998136665402667640545682389
No 68
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.07 E-value=0.0049 Score=31.53 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH--HHHHHHHHHHHCCCCCC----CCHHHHHHHH
Q ss_conf 99739999918999488999999999842289988999992899999--99999999995354453----3179999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNI--KDIQKEIAEKLGLILHE----ETVSRRASRL 245 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~--~~~~~~i~~~l~~~~~~----~~~~~~~~~l 245 (1344)
..+.+|.++|+.|+||||-+.+++...+.+ ...+.+-..+.+.+ .+.++..++.++.+... .+....+...
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~~~~~---g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~ 83 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQFEQQ---GKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA 83 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHHHHTT---TCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHC---CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 999799998999999899999999999977---99479982321366612045554343388621135687799999999
Q ss_pred HHHHHCCCEEEEEEECCC
Q ss_conf 999983981999992999
Q 000701 246 YERLKEEKKILVVLDNLW 263 (1344)
Q Consensus 246 ~~~l~~~~~~LlVlDdv~ 263 (1344)
.+.......=++++|-.-
T Consensus 84 ~~~a~~~~~d~ilIDTaG 101 (211)
T d2qy9a2 84 IQAAKARNIDVLIADTAG 101 (211)
T ss_dssp HHHHHHTTCSEEEECCCC
T ss_pred HHHHHHCCCCEEEECCCC
T ss_conf 999987699889965688
No 69
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.05 E-value=0.0048 Score=31.61 Aligned_cols=61 Identities=20% Similarity=0.302 Sum_probs=41.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC-CCHHHHHHHHHHHHCCCCC
Q ss_conf 99739999918999488999999999842289988999992899-9999999999999535445
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT-PNIKDIQKEIAEKLGLILH 234 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~-~~~~~~~~~i~~~l~~~~~ 234 (1344)
.+.+++.++|+.|+||||-+.+++...+.+. ..+..+++... ....+.++..++.++.+..
T Consensus 8 ~~~~vi~lvGp~GvGKTTTiaKLA~~~~~~g--~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~ 69 (207)
T d1ls1a2 8 KDRNLWFLVGLQGSGKTTTAAKLALYYKGKG--RRPLLVAADTQRPAAREQLRLLGEKVGVPVL 69 (207)
T ss_dssp CSSEEEEEECCTTTTHHHHHHHHHHHHHHTT--CCEEEEECCSSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEECCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 9986899989999988999999999999779--9279995443464088889999986288631
No 70
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.0013 Score=35.06 Aligned_cols=53 Identities=25% Similarity=0.431 Sum_probs=39.2
Q ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 9999999987199739999918999488999999999842289988999992899
Q 000701 161 TLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT 215 (1344)
Q Consensus 161 ~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~ 215 (1344)
++..+.+.+..+..++|.+.|-||+||||+|..++.....+. ..+.-++....
T Consensus 7 ~~~~~~~~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G--~rVllvD~Dp~ 59 (279)
T d1ihua2 7 SLSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMG--FDVHLTTSDPA 59 (279)
T ss_dssp CHHHHHHHHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTT--CCEEEEESCCC
T ss_pred CHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEECCCC
T ss_conf 588999885037978999979998878999999999999789--93899937999
No 71
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=96.94 E-value=0.0024 Score=33.51 Aligned_cols=90 Identities=21% Similarity=0.272 Sum_probs=51.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC-CCHHHHHHHHHHHHCCCCCC----CCHHHHHHHHH
Q ss_conf 99739999918999488999999999842289988999992899-99999999999995354453----31799999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT-PNIKDIQKEIAEKLGLILHE----ETVSRRASRLY 246 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~-~~~~~~~~~i~~~l~~~~~~----~~~~~~~~~l~ 246 (1344)
..+.||.++|+.|+||||-+.+++...+.+. . .+..++.... ....+.++..++.++..... .+.........
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g-~-kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~ 87 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKG-F-KVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGV 87 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTT-C-CEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC-C-CEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHH
T ss_conf 9998999989999998999999999999779-9-3699972023551567898740146842230244102447899999
Q ss_pred HHHHCCCEEEEEEECCC
Q ss_conf 99983981999992999
Q 000701 247 ERLKEEKKILVVLDNLW 263 (1344)
Q Consensus 247 ~~l~~~~~~LlVlDdv~ 263 (1344)
........=++++|-.-
T Consensus 88 ~~~~~~~~d~IlIDTaG 104 (211)
T d1j8yf2 88 EKFLSEKMEIIIVDTAG 104 (211)
T ss_dssp HHHHHTTCSEEEEECCC
T ss_pred HHHHCCCCCEEEEECCC
T ss_conf 87402677369985377
No 72
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.92 E-value=0.0021 Score=33.83 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=44.8
Q ss_pred HHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 999999987--199739999918999488999999999842289988999992899999999999999
Q 000701 162 LRDIRNALT--NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAE 227 (1344)
Q Consensus 162 ~~~l~~~l~--~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~ 227 (1344)
..++.+.+. .++..+|+|+|++|+|||||...+......+.+--.++-++.+..++-..++..-.+
T Consensus 40 ~~~ll~~~~~~~~~~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~r 107 (327)
T d2p67a1 40 STQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTR 107 (327)
T ss_dssp HHHHHHHHGGGCSCSEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC--------------
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCHHH
T ss_conf 99999986531698328974389999899999999999975698332203777610006515541367
No 73
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.92 E-value=0.00087 Score=36.23 Aligned_cols=56 Identities=21% Similarity=0.290 Sum_probs=39.0
Q ss_pred CCCCHHHHHHHHHHHHH--------------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 62120989999999987--------------19973999991899948899999999984228998899999289
Q 000701 154 AFESRFSTLRDIRNALT--------------NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ 214 (1344)
Q Consensus 154 ~~~gR~~~~~~l~~~l~--------------~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~ 214 (1344)
.++|-++.++.+...+. ....+-+.++||+|+|||.||+.+++... ...+-++.+.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~-----~~~~~i~~s~ 84 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLAN-----APFIKVEATK 84 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHT-----CCEEEEEGGG
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCC-----CCHHCCCCCC
T ss_conf 134919999999999998987724578776678986699989999888899999862132-----2100034433
No 74
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.90 E-value=0.0055 Score=31.23 Aligned_cols=100 Identities=23% Similarity=0.368 Sum_probs=61.2
Q ss_pred HHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC-CHHHHHHHHHHHHCC-----------
Q ss_conf 999987-1997399999189994889999999998422899889999928999-999999999999535-----------
Q 000701 165 IRNALT-NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTP-NIKDIQKEIAEKLGL----------- 231 (1344)
Q Consensus 165 l~~~l~-~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~-~~~~~~~~i~~~l~~----------- 231 (1344)
.++.+. -.+...+.|.|..|+|||+|+..+.+.... .+-+.++++-+.+.. ...++.+...+.--.
T Consensus 58 aID~l~pigkGQr~~If~~~g~GKt~l~~~i~~~~~~-~~~~v~V~~~iGer~~ev~~~~~~~~~~~~~~~~~~~~~tvv 136 (276)
T d2jdid3 58 VVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAK-AHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVAL 136 (276)
T ss_dssp HHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHHHTT-TCSSEEEEEEESCCHHHHHHHHHHHHHHTSSCSSSSCCCEEE
T ss_pred EEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH-HCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 0310256367887776679998989999999998876-179969999955575999999999886176545666423899
Q ss_pred --CCCCCCHH------HHHHHHHHHHH--CCCEEEEEEECCCCC
Q ss_conf --44533179------99999999998--398199999299985
Q 000701 232 --ILHEETVS------RRASRLYERLK--EEKKILVVLDNLWKC 265 (1344)
Q Consensus 232 --~~~~~~~~------~~~~~l~~~l~--~~~~~LlVlDdv~~~ 265 (1344)
....+... .....+-+++. ++++.|+++||+...
T Consensus 137 v~~~s~~~~~~r~~~~~~a~~iAEyf~~~~G~~VLv~~Dsltr~ 180 (276)
T d2jdid3 137 VYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRF 180 (276)
T ss_dssp EEECTTSCHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECTHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 99789999999999999999999998863798489997060689
No 75
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.88 E-value=0.0011 Score=35.59 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=26.2
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 1997399999189994889999999998422
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
..+.-+|+|.|+.|.||||+|+.+.......
T Consensus 19 ~~~~~iIgI~G~~GSGKSTla~~L~~~l~~~ 49 (198)
T d1rz3a_ 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQ 49 (198)
T ss_dssp CSSSEEEEEEECTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 7998899978988789999999999983634
No 76
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=96.86 E-value=0.0022 Score=33.74 Aligned_cols=57 Identities=25% Similarity=0.332 Sum_probs=40.8
Q ss_pred HHHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 9999999987--19973999991899948899999999984228998899999289999
Q 000701 161 TLRDIRNALT--NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPN 217 (1344)
Q Consensus 161 ~~~~l~~~l~--~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~ 217 (1344)
...++.+.+. .++..+|+|+|++|+|||||...+......+.+--.++-++.+..++
T Consensus 36 ~~~~~~~~~~~~~~~~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~ 94 (323)
T d2qm8a1 36 AVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRT 94 (323)
T ss_dssp HHHHHHHHHGGGCCCSEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSS
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf 99999998633069815986117998889999999999876368751344346554787
No 77
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.84 E-value=0.0048 Score=31.59 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=51.8
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC-CCHHHHHHHHHHHHCCCCCCC----CHHHHHHHHH
Q ss_conf 99739999918999488999999999842289988999992899-999999999999953544533----1799999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT-PNIKDIQKEIAEKLGLILHEE----TVSRRASRLY 246 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~-~~~~~~~~~i~~~l~~~~~~~----~~~~~~~~l~ 246 (1344)
..+.+|.++|+.|+||||-+.+++.....++ ..+..++.... ....+.++..++.++...... +.........
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~~~~~--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~ 86 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFVDEG--KSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAV 86 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHHHHTT--CCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9998999989999988999999999999779--90699960133420467888776432764103677776899878878
Q ss_pred HHHHCCCEEEEEEECCC
Q ss_conf 99983981999992999
Q 000701 247 ERLKEEKKILVVLDNLW 263 (1344)
Q Consensus 247 ~~l~~~~~~LlVlDdv~ 263 (1344)
.....+..=++++|-.-
T Consensus 87 ~~~~~~~~d~ilIDTaG 103 (213)
T d1vmaa2 87 AHALARNKDVVIIDTAG 103 (213)
T ss_dssp HHHHHTTCSEEEEEECC
T ss_pred HHHHHCCCCEEEEECCC
T ss_conf 99987699989982455
No 78
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=96.78 E-value=0.0026 Score=33.30 Aligned_cols=99 Identities=13% Similarity=0.160 Sum_probs=54.9
Q ss_pred HHHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC----CCCCCCH
Q ss_conf 9999987-1997399999189994889999999998422899889999928999999999999999535----4453317
Q 000701 164 DIRNALT-NANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGL----ILHEETV 238 (1344)
Q Consensus 164 ~l~~~l~-~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~----~~~~~~~ 238 (1344)
++++.+. -+....+.|.|..|+|||+|+..+.+.......-..++...+.+.. +++ ..+.+.... .......
T Consensus 32 r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~~~~~~~~~v~~~~~iger~--~ev-~~~~~~~~~~vv~~t~d~~~ 108 (289)
T d1xpua3 32 RVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERP--EEV-TEMQRLVKGEVVASTFDEPA 108 (289)
T ss_dssp HHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHHHHHHCTTSEEEEEEEEECH--HHH-HHHHHHCSSEEEEEETTSCH
T ss_pred EEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECEEH--HHH-HHHHHHCCEEEEECCCCCCH
T ss_conf 356412564578755686799988789999999977515897699987611008--788-76775405079960588835
Q ss_pred ------HHHHHHHHHHHH-CCCEEEEEEECCCCC
Q ss_conf ------999999999998-398199999299985
Q 000701 239 ------SRRASRLYERLK-EEKKILVVLDNLWKC 265 (1344)
Q Consensus 239 ------~~~~~~l~~~l~-~~~~~LlVlDdv~~~ 265 (1344)
......+-+++. +++.+|+++||+-..
T Consensus 109 ~~r~~~~~~a~~iAEyfrd~G~dVLli~Dsltr~ 142 (289)
T d1xpua3 109 SRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRL 142 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH
T ss_conf 6789999999999999998265751551768999
No 79
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.77 E-value=0.0059 Score=31.03 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=32.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 973999991899948899999999984228998899999289
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ 214 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~ 214 (1344)
...++.|.|++|+|||++|.+++..... ....++|++...
T Consensus 25 ~gsl~li~G~pGsGKT~l~~qia~~~~~--~~~~~~~is~e~ 64 (242)
T d1tf7a2 25 KDSIILATGATGTGKTLLVSRFVENACA--NKERAILFAYEE 64 (242)
T ss_dssp SSCEEEEEECTTSSHHHHHHHHHHHHHT--TTCCEEEEESSS
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHH--HCCCCCEEECCC
T ss_conf 9849999918999999999999999987--232441121267
No 80
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.74 E-value=0.0054 Score=31.28 Aligned_cols=29 Identities=24% Similarity=0.305 Sum_probs=25.2
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 19973999991899948899999999984
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.+..++|.|.|++|.||||+|+.++....
T Consensus 5 ~~~~~iI~i~GppGSGKsT~a~~La~~~g 33 (196)
T d1ukza_ 5 PDQVSVIFVLGGPGAGKGTQCEKLVKDYS 33 (196)
T ss_dssp TTTCEEEEEECSTTSSHHHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 99972899989999998999999999859
No 81
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.74 E-value=0.0015 Score=34.81 Aligned_cols=38 Identities=16% Similarity=0.057 Sum_probs=29.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 973999991899948899999999984228998899999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSE 211 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~ 211 (1344)
+..+|.++|+.|+||||+|+.++...... .++...++.
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~~~-~~~~~~~~~ 42 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLNQQ-GGRSVSLLL 42 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHH-CSSCEEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCHHHHH
T ss_conf 97699988999999999999999998650-798403211
No 82
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=96.74 E-value=0.0091 Score=29.85 Aligned_cols=73 Identities=18% Similarity=0.267 Sum_probs=45.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 97399999189994889999999998422899889999928999999999999999535445331799999999999839
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHEETVSRRASRLYERLKEE 252 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~~~l~~~ 252 (1344)
...++.++|++|+|||.+|+.++.....+..|- -+..++... .+-. .....+..+++...
T Consensus 122 ~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~---~~~~~~~~~--------------~~~G-~~e~~~~~~f~~a~-- 181 (321)
T d1w44a_ 122 ASGMVIVTGKGNSGKTPLVHALGEALGGKDKYA---TVRFGEPLS--------------GYNT-DFNVFVDDIARAML-- 181 (321)
T ss_dssp ESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCE---EEEBSCSST--------------TCBC-CHHHHHHHHHHHHH--
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEE---EEEHHHHHH--------------CCCC-HHHHHHHHHHHHHH--
T ss_conf 886388877998508899999999863799808---978268544--------------2444-57899999999986--
Q ss_pred CEEEEEEECCCCC
Q ss_conf 8199999299985
Q 000701 253 KKILVVLDNLWKC 265 (1344)
Q Consensus 253 ~~~LlVlDdv~~~ 265 (1344)
++++|.+|+++..
T Consensus 182 ~~~ilf~DEid~~ 194 (321)
T d1w44a_ 182 QHRVIVIDSLKNV 194 (321)
T ss_dssp HCSEEEEECCTTT
T ss_pred HCCEEEEEHHHHH
T ss_conf 2658974101222
No 83
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=96.72 E-value=0.0011 Score=35.68 Aligned_cols=28 Identities=29% Similarity=0.376 Sum_probs=25.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7399999189994889999999998422
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
.++++|+|..|.|||||++++......+
T Consensus 2 ~Pvi~itG~~GSGKTTL~~~L~~~l~~~ 29 (170)
T d1np6a_ 2 IPLLAFAAWSGTGKTTLLKKLIPALCAR 29 (170)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 7889999189998999999999999977
No 84
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=96.72 E-value=0.00055 Score=37.45 Aligned_cols=26 Identities=27% Similarity=0.360 Sum_probs=23.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.+.|+|.|+.|+||||||+.++....
T Consensus 7 ~K~I~i~G~~GsGKTTla~~La~~~~ 32 (192)
T d1lw7a2 7 AKTVAILGGESSGKSVLVNKLAAVFN 32 (192)
T ss_dssp CEEEEEECCTTSHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 32899989999989999999999849
No 85
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=96.69 E-value=0.0074 Score=30.44 Aligned_cols=87 Identities=17% Similarity=0.109 Sum_probs=45.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC--CCCCCCHHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998422899889999928999999999999999535--4453317999999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGL--ILHEETVSRRASRLYERLK 250 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~--~~~~~~~~~~~~~l~~~l~ 250 (1344)
.+-+|+|.|..|+||||+|+.+.........-..+.-++...-+...+.... +.+.. ..+..-+.+........++
T Consensus 79 ~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~~~~~~l~~--~~~~~~~g~Pes~D~~~L~~~L~~lk 156 (308)
T d1sq5a_ 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKE--RGLMKKKGFPESYDMHRLVKFVSDLK 156 (308)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCCHHHHHH--HTCTTCTTSGGGBCHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHH--HCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9889999689999876899999999730468996599952156898458888--36876688167631999999999997
Q ss_pred CCCE--EEEEEEC
Q ss_conf 3981--9999929
Q 000701 251 EEKK--ILVVLDN 261 (1344)
Q Consensus 251 ~~~~--~LlVlDd 261 (1344)
.++. ..=++|-
T Consensus 157 ~g~~~v~~P~yd~ 169 (308)
T d1sq5a_ 157 SGVPNVTAPVYSH 169 (308)
T ss_dssp TTCSCEEECCEET
T ss_pred CCCCCCEEECCCH
T ss_conf 5998642105300
No 86
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.67 E-value=0.0012 Score=35.45 Aligned_cols=28 Identities=29% Similarity=0.358 Sum_probs=24.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 3999991899948899999999984228
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERK 202 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~ 202 (1344)
+.|.|+|++|+||||+++.++.....+.
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l~~~~ 29 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVLKSSG 29 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 6999988999719999999999999779
No 87
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=96.56 E-value=0.00097 Score=35.94 Aligned_cols=49 Identities=22% Similarity=0.241 Sum_probs=36.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9865621209899999999871997399999189994889999999998
Q 000701 150 TGYEAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 150 ~~~~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.+...++|.+..++.+.-.......+-+.+.|++|+|||++|+.+..-.
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~~~h~vLl~G~pG~GKT~lar~~~~iL 52 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALL 52 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCGGGCCEEEECCGGGCTTHHHHHHHHHS
T ss_pred CCHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 9851406949999999999764699708998899852999999998737
No 88
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.56 E-value=0.0028 Score=33.10 Aligned_cols=28 Identities=25% Similarity=0.309 Sum_probs=24.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973999991899948899999999984
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
..++.|.++|++|+|||++|+.++....
T Consensus 30 ~~P~~ilL~GpPGtGKT~la~~la~~~~ 57 (273)
T d1gvnb_ 30 ESPTAFLLGGQPGSGKTSLRSAIFEETQ 57 (273)
T ss_dssp SSCEEEEEECCTTSCTHHHHHHHHHHTT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 9997999889799889999999999865
No 89
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=96.53 E-value=0.00068 Score=36.91 Aligned_cols=25 Identities=32% Similarity=0.348 Sum_probs=22.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+.|.++|++|+||||+|+.++....
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~ 27 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLN 27 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 7499989999999999999999969
No 90
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.50 E-value=0.0014 Score=34.87 Aligned_cols=29 Identities=24% Similarity=0.328 Sum_probs=25.1
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 19973999991899948899999999984
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
...+.+|.|+|++|.||||+|+.++....
T Consensus 3 ~~kp~iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 3 KSKPNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CCCCEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 88994899989999988999999999979
No 91
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.45 E-value=0.0012 Score=35.29 Aligned_cols=24 Identities=33% Similarity=0.450 Sum_probs=21.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
++|.|.|++|+||||+|+.++...
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~ 26 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQL 26 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 089998999999899999999980
No 92
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=96.39 E-value=0.0052 Score=31.40 Aligned_cols=31 Identities=29% Similarity=0.357 Sum_probs=25.9
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 1997399999189994889999999998422
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
+...++|.+.|-||+||||+|..++.....+
T Consensus 5 ~~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~ 35 (296)
T d1ihua1 5 QNIPPYLFFTGKGGVGKTSISCATAIRLAEQ 35 (296)
T ss_dssp SSCCSEEEEECSTTSSHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf 7898599997998674999999999999978
No 93
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.34 E-value=0.0015 Score=34.69 Aligned_cols=28 Identities=25% Similarity=0.291 Sum_probs=24.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7399999189994889999999998422
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
..+|.++|+.|.||||+|+.++......
T Consensus 19 g~vI~L~G~pGSGKTTiAk~La~~l~~~ 46 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH 46 (195)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9699988999999999999999999744
No 94
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=96.32 E-value=0.0043 Score=31.89 Aligned_cols=39 Identities=21% Similarity=0.391 Sum_probs=30.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 39999918999488999999999842289988999992899
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT 215 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~ 215 (1344)
+.|+|+|-||+||||+|..++....... + .+.-++....
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G-~-rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMG-K-TIMVVGCDPK 40 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTT-C-CEEEEEECTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC-C-CEEEEECCCC
T ss_conf 7999989985779999999999999689-9-5899963799
No 95
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.28 E-value=0.002 Score=33.95 Aligned_cols=27 Identities=22% Similarity=0.389 Sum_probs=24.6
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 399999189994889999999998422
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
++|+|.|+.|+||||+++.+......+
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~~~ 28 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLRKE 28 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 889998999989899999999999876
No 96
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=96.28 E-value=0.0016 Score=34.58 Aligned_cols=25 Identities=40% Similarity=0.446 Sum_probs=22.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+.|.|+|++|+||||+|+.++....
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~ 29 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSG 29 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9798989999998999999999979
No 97
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.27 E-value=0.0033 Score=32.64 Aligned_cols=28 Identities=25% Similarity=0.273 Sum_probs=24.2
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7399999189994889999999998422
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
+.+|.++|.+|+||||+|+.+++.....
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~ 29 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFI 29 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9899998999999999999999999746
No 98
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.23 E-value=0.0031 Score=32.78 Aligned_cols=28 Identities=29% Similarity=0.280 Sum_probs=25.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 3999991899948899999999984228
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERK 202 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~ 202 (1344)
++++|+|..|.|||||+.++....+.+.
T Consensus 2 kii~I~G~~gSGKTTli~~l~~~L~~~g 29 (165)
T d1xjca_ 2 NVWQVVGYKHSGKTTLMEKWVAAAVREG 29 (165)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHCC
T ss_conf 0999980999989999999999998679
No 99
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.22 E-value=0.0021 Score=33.83 Aligned_cols=43 Identities=30% Similarity=0.356 Sum_probs=33.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984228998899999289999999999999995
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
.++|+|.|++|.||+|+|+.++++.. |.+ .+..++++.++...
T Consensus 3 ~piI~I~GppGSGKgT~ak~La~~~g----l~~---------iStGdLlR~~a~~~ 45 (225)
T d1ckea_ 3 APVITIDGPSGAGKGTLCKAMAEALQ----WHL---------LDSGAIYRVLALAA 45 (225)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHT----CEE---------EEHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHC----CCE---------ECHHHHHHHHHHHH
T ss_conf 98899779998898999999999969----908---------98889999999999
No 100
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.21 E-value=0.0063 Score=30.87 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=26.6
Q ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 87199739999918999488999999999842
Q 000701 169 LTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 169 l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
....+..+|.+.|++|.||||+|+.+......
T Consensus 19 ~~~~kg~vIwltGlsGsGKTTia~~L~~~l~~ 50 (208)
T d1m7ga_ 19 LRNQRGLTIWLTGLSASGKSTLAVELEHQLVR 50 (208)
T ss_dssp HHTSSCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 85899869999899999989999999988777
No 101
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.17 E-value=0.0084 Score=30.09 Aligned_cols=110 Identities=12% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHCCCCCEEEEECC-CCCCC-----CCCCCCCCCCCCEEECCCCCCCC-----C-CCCCCCCCCCEEECCCCCCC--
Q ss_conf 77881398652997079-88886-----77111157798688758877777-----2-10135434553546368785--
Q 000701 546 KSFFKEMRMLRVVGFSK-MQLSS-----LPSSMDLLVNLQTLSLDQSMLGD-----I-AIIGKLKNLEILSMINSDIV-- 611 (1344)
Q Consensus 546 ~~~f~~l~~Lr~L~L~~-~~i~~-----lp~~i~~L~~L~~L~L~~~~i~~-----l-~~i~~L~~L~~L~l~~~~l~-- 611 (1344)
..+..+.+.|+.|+|++ +.+.. +-..+....+|++|++++|.+.. + ..+...+.|++|++++|.+.
T Consensus 8 ~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~ 87 (167)
T d1pgva_ 8 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 87 (167)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHCCHH
T ss_conf 99982899981978279999898999999999763776454012015621567988753100023433003301021459
Q ss_pred ---CCCHHHHCCCCCCEEECCCCCCCCCCC-------HHHHCCCCCCCEEECCCC
Q ss_conf ---567442055745488044554323239-------044303776878982024
Q 000701 612 ---KLPEAFGLLTKLRLLDLTDCFQLKVIA-------PNVLSSLIRLEELYMRNC 656 (1344)
Q Consensus 612 ---~lp~~i~~L~~L~~L~l~~~~~l~~~~-------~~~l~~L~~L~~L~l~~~ 656 (1344)
.+-..+..-+.|++|++.++ ....+. ...+..-+.|+.|++..+
T Consensus 88 g~~~l~~aL~~n~sL~~L~l~~n-~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~ 141 (167)
T d1pgva_ 88 LLARLLRSTLVTQSIVEFKADNQ-RQSVLGNQVEMDMMMAIEENESLLRVGISFA 141 (167)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCC-SSCCCCHHHHHHHHHHHHHCSSCCEEECCCC
T ss_pred HHHHHHHHHHHCCCCCEEECCCC-CCCCCCHHHHHHHHHHHHHCCCCCEEECCCC
T ss_conf 99999999984893898778877-6888657999999999972998538648688
No 102
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=96.14 E-value=0.0023 Score=33.60 Aligned_cols=24 Identities=29% Similarity=0.369 Sum_probs=20.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
++|.|.|++|.||||+|+.+....
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 799998999999999999999957
No 103
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.10 E-value=0.0028 Score=33.08 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=23.5
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973999991899948899999999984
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+....|.|.|++|+||||+|+.++....
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l~ 30 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAELD 30 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 9988899982899988999999999858
No 104
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.05 E-value=0.0036 Score=32.42 Aligned_cols=28 Identities=29% Similarity=0.437 Sum_probs=24.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973999991899948899999999984
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
...+++.|.|+.|.||||+|+.++....
T Consensus 4 ~~~~iivl~G~~GsGKsT~a~~La~~l~ 31 (171)
T d1knqa_ 4 HDHHIYVLMGVSGSGKSAVASEVAHQLH 31 (171)
T ss_dssp TTSEEEEEECSTTSCHHHHHHHHHHHHT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 9871899989999898999999999869
No 105
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.03 E-value=0.002 Score=34.04 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=21.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999918999488999999999842
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
.|.++|+.|+||||+|+.++.....
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~ 27 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGV 27 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTC
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 4899889999889999999998499
No 106
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.02 E-value=0.014 Score=28.72 Aligned_cols=49 Identities=14% Similarity=0.146 Sum_probs=34.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCCEEEEEECCCCCCHHHH
Q ss_conf 973999991899948899999999984228----9988999992899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERK----LFDQVVFSEVSQTPNIKDI 221 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~----~f~~~~wv~~~~~~~~~~~ 221 (1344)
..+++.|.|++|.|||++|.+++....... .-..++|+.....+.....
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 85 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRL 85 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGG
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHH
T ss_conf 99699998389998899999999986312431268963999940230789999
No 107
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.00 E-value=0.003 Score=32.84 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=23.7
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
..++|.|.|+.|.||||+|+.++....
T Consensus 2 ~~kiI~l~G~~GsGKsTva~~L~~~l~ 28 (178)
T d1qhxa_ 2 TTRMIILNGGSSAGKSGIVRCLQSVLP 28 (178)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHSS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 985999989999998999999999728
No 108
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=95.99 E-value=0.0027 Score=33.19 Aligned_cols=24 Identities=38% Similarity=0.513 Sum_probs=21.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999918999488999999999842
Q 000701 177 IGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
|.++|++|+||||+|+.++.....
T Consensus 3 I~liG~~GsGKsTi~k~La~~l~~ 26 (161)
T d1viaa_ 3 IVFIGFMGSGKSTLARALAKDLDL 26 (161)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 999899999889999999998399
No 109
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.91 E-value=0.0038 Score=32.23 Aligned_cols=26 Identities=23% Similarity=0.232 Sum_probs=23.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+.+|.|.|++|.||||.|+.++....
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g 26 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYG 26 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 93999979999998999999999869
No 110
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.90 E-value=0.028 Score=26.86 Aligned_cols=79 Identities=11% Similarity=0.031 Sum_probs=48.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHHHHHCC-------CCCCCCHHHHHHHH
Q ss_conf 7399999189994889999999998422899-889999928999999999999999535-------44533179999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKERKLF-DQVVFSEVSQTPNIKDIQKEIAEKLGL-------ILHEETVSRRASRL 245 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f-~~~~wv~~~~~~~~~~~~~~i~~~l~~-------~~~~~~~~~~~~~l 245 (1344)
+-+|+|.|..|.||||+|..+......+... ..+..++..+-+-..+-...+++.... ..+..-+.......
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY~t~~~r~~L~~~~~~~pl~~~RG~PgThD~~ll~~~ 106 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEV 106 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCCHHHHHHHHHHTTTCGGGSSSCSTTSBCHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf 88998379987889999999999999872778606763567777888999998521355531100478740348899999
Q ss_pred HHHHHCC
Q ss_conf 9999839
Q 000701 246 YERLKEE 252 (1344)
Q Consensus 246 ~~~l~~~ 252 (1344)
+..+.++
T Consensus 107 l~~l~~~ 113 (286)
T d1odfa_ 107 LNTIFNN 113 (286)
T ss_dssp HHHHTC-
T ss_pred HHHHHHH
T ss_conf 9999740
No 111
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=95.89 E-value=0.0091 Score=29.86 Aligned_cols=40 Identities=25% Similarity=0.424 Sum_probs=31.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 399999189994889999999998422899889999928999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTP 216 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~ 216 (1344)
+.|+|.|-||+||||+|.+++.....+. ..+.-++.....
T Consensus 3 r~IaisgKGGVGKTT~a~NLA~~LA~~G--~rVLlID~DpQ~ 42 (289)
T d2afhe1 3 RQCAIYGKGGIGKSTTTQNLVAALAEMG--KKVMIVGCDPKA 42 (289)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHHTT--CCEEEEEECSSS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEECCCCC
T ss_conf 2899989998779999999999999789--978999518999
No 112
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=95.88 E-value=0.0036 Score=32.39 Aligned_cols=43 Identities=19% Similarity=0.175 Sum_probs=32.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 39999918999488999999999842289988999992899999999999999953
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLG 230 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~ 230 (1344)
-+|+|-|++|+||||+|+.++.+.. |.+ .+..++++.++....
T Consensus 4 i~IaIdGp~GsGKgT~ak~La~~lg----~~~---------istGdl~R~~a~~~~ 46 (223)
T d1q3ta_ 4 IQIAIDGPASSGKSTVAKIIAKDFG----FTY---------LDTGAMYRAATYMAL 46 (223)
T ss_dssp CEEEEECSSCSSHHHHHHHHHHHHC----CEE---------EEHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHC----CCE---------ECHHHHHHHHHHHHH
T ss_conf 5999789998798999999999969----947---------877999999999998
No 113
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=95.87 E-value=0.0029 Score=32.97 Aligned_cols=26 Identities=31% Similarity=0.276 Sum_probs=22.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 39999918999488999999999842
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
+.|.++|++|+||||+|+.++.....
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~ 28 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGY 28 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTC
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 98899889999889999999999499
No 114
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=95.84 E-value=0.0049 Score=31.55 Aligned_cols=27 Identities=30% Similarity=0.401 Sum_probs=24.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 399999189994889999999998422
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
++|.|.|+.|+||||+++.++.....+
T Consensus 2 kiivi~G~~GsGKTT~~~~La~~L~~~ 28 (194)
T d1nksa_ 2 KIGIVTGIPGVGKSTVLAKVKEILDNQ 28 (194)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 199998989989899999999999876
No 115
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=95.81 E-value=0.01 Score=29.49 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=43.4
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC--CCCHHHHHHHHHHH---HCC----CCCCCCHHHHH
Q ss_conf 9973999991899948899999999984228998899999289--99999999999999---535----44533179999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ--TPNIKDIQKEIAEK---LGL----ILHEETVSRRA 242 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~--~~~~~~~~~~i~~~---l~~----~~~~~~~~~~~ 242 (1344)
.+.++|+|.|..|.||||+|+.+.+..+... .. ++.+.... .++..+.-..+... -.. ......+.+..
T Consensus 2 ~k~pIIgIaG~SGSGKTTva~~l~~i~~~~~-v~-~~iI~~Dsfyr~~R~~~~~~~~~~~~~~~~~~~~~~P~A~d~dlL 79 (288)
T d1a7ja_ 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREG-VK-AVSIEGDAFHRFNRADMKAELDRRYAAGDATFSHFSYEANELKEL 79 (288)
T ss_dssp TTSCEEEEESCC---CCTHHHHHHHHHHHHT-CC-EEEEEGGGGBSCCHHHHHHHHHHHHHHTCTTCSTTSGGGBCHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCC-CC-EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
T ss_conf 9888999989997809999999999971569-97-699947778756502201113333354046779898442659999
Q ss_pred HHHHHHHHCCC
Q ss_conf 99999998398
Q 000701 243 SRLYERLKEEK 253 (1344)
Q Consensus 243 ~~l~~~l~~~~ 253 (1344)
...+..+.+++
T Consensus 80 ~~~l~~L~~g~ 90 (288)
T d1a7ja_ 80 ERVFREYGETG 90 (288)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHCCC
T ss_conf 99999998799
No 116
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=95.81 E-value=0.009 Score=29.90 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=22.0
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
...-+..+|+.|+|||.+|+.++...
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~ 92 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHL 92 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHC
T ss_conf 87532441899863789999998644
No 117
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.67 E-value=0.0047 Score=31.64 Aligned_cols=27 Identities=22% Similarity=0.423 Sum_probs=22.5
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 199739999918999488999999999
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.+...+|.++|++|.||||+|++....
T Consensus 11 ~~~p~liil~G~pGsGKST~a~~l~~~ 37 (172)
T d1yj5a2 11 SPNPEVVVAVGFPGAGKSTFIQEHLVS 37 (172)
T ss_dssp CSSCCEEEEECCTTSSHHHHHHHHTGG
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 999989999899999899999999976
No 118
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.66 E-value=0.03 Score=26.67 Aligned_cols=49 Identities=27% Similarity=0.315 Sum_probs=37.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC----CCCCEEEEEECCCCCCHHHH
Q ss_conf 97399999189994889999999998422----89988999992899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKER----KLFDQVVFSEVSQTPNIKDI 221 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~----~~f~~~~wv~~~~~~~~~~~ 221 (1344)
..+++.|.|++|+|||++|.+++...... .....++|+......+....
T Consensus 35 ~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T d1pzna2 35 TQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERI 87 (254)
T ss_dssp SSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHCCCCCEEEEEECCCHHHHHHH
T ss_conf 88799998589898899999999986344876388962899831012589999
No 119
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=95.64 E-value=0.0053 Score=31.33 Aligned_cols=24 Identities=42% Similarity=0.589 Sum_probs=22.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999918999488999999999842
Q 000701 177 IGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
|+|+|+.|+|||||++.+......
T Consensus 3 i~I~G~~G~GKSTLl~~i~~~l~~ 26 (178)
T d1ye8a1 3 IIITGEPGVGKTTLVKKIVERLGK 26 (178)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHGG
T ss_pred EEEECCCCCHHHHHHHHHHHCCCC
T ss_conf 999989993899999999814888
No 120
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=95.61 E-value=0.02 Score=27.67 Aligned_cols=89 Identities=15% Similarity=0.178 Sum_probs=49.9
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHHHHHHHHHCCC--------CCCC-----CH
Q ss_conf 973999991899948899999999984228998899999289999-999999999995354--------4533-----17
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPN-IKDIQKEIAEKLGLI--------LHEE-----TV 238 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~-~~~~~~~i~~~l~~~--------~~~~-----~~ 238 (1344)
....+.|.|..|+|||+++........ .+.+.++++.+..... ..++.+.....-... .++. -.
T Consensus 66 ~GQr~~Ifg~~g~GKt~l~~~~~~~~~--~~~~v~V~~~iGer~~Ev~e~~~~~~~~~~~~~tvvv~~tsd~p~~~r~~a 143 (276)
T d1fx0a3 66 RGQRELIIGDRQTGKTAVATDTILNQQ--GQNVICVYVAIGQKASSVAQVVTNFQERGAMEYTIVVAETADSPATLQYLA 143 (276)
T ss_dssp TTCBCBEEESSSSSHHHHHHHHHHTCC--TTTCEEEEEEESCCHHHHHHHHHHTGGGTGGGSEEEEEECTTSCGGGTTHH
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHC--CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHH
T ss_conf 776676006778885799999776540--467535555522126778899985115775033100123467659999999
Q ss_pred HHHHHHHHHHHH-CCCEEEEEEECCC
Q ss_conf 999999999998-3981999992999
Q 000701 239 SRRASRLYERLK-EEKKILVVLDNLW 263 (1344)
Q Consensus 239 ~~~~~~l~~~l~-~~~~~LlVlDdv~ 263 (1344)
......+-+++. ++++.|+++||+-
T Consensus 144 ~~~a~tiAEyfrd~G~~Vlll~Dslt 169 (276)
T d1fx0a3 144 PYTGAALAEYFMYRERHTLIIYDDLS 169 (276)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99999888899975996457750538
No 121
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.61 E-value=0.0043 Score=31.92 Aligned_cols=26 Identities=31% Similarity=0.457 Sum_probs=22.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
..++|.|.|+.|.||||+|+.+....
T Consensus 3 ~g~iI~l~G~~GsGKSTia~~La~~l 28 (176)
T d1zp6a1 3 GGNILLLSGHPGSGKSTIAEALANLP 28 (176)
T ss_dssp TTEEEEEEECTTSCHHHHHHHHHTCS
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 98599998899998899999999995
No 122
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.59 E-value=0.0064 Score=30.82 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=24.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7399999189994889999999998422
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
+-+|+|.|..|.||||+|+.+.......
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCHH
T ss_conf 9899998999787999999999996410
No 123
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=95.41 E-value=0.01 Score=29.51 Aligned_cols=12 Identities=17% Similarity=0.113 Sum_probs=4.4
Q ss_pred CCCCCEEEEECC
Q ss_conf 398652997079
Q 000701 551 EMRMLRVVGFSK 562 (1344)
Q Consensus 551 ~l~~Lr~L~L~~ 562 (1344)
+.+.|+.|++++
T Consensus 15 ~~~~L~~L~L~~ 26 (166)
T d1io0a_ 15 NDPDLEEVNLNN 26 (166)
T ss_dssp TCTTCCEEECTT
T ss_pred CCCCCCEEECCC
T ss_conf 599986887689
No 124
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=95.40 E-value=0.011 Score=29.24 Aligned_cols=46 Identities=11% Similarity=0.299 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 62120989999999987--19973999991899948899999999984
Q 000701 154 AFESRFSTLRDIRNALT--NANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 154 ~~~gR~~~~~~l~~~l~--~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|||....++++.+.+. .....-|.|.|..|+|||++|+.+...-.
T Consensus 1 ~~v~~S~~~~~~~~~~~~~a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~ 48 (247)
T d1ny5a2 1 EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSD 48 (247)
T ss_dssp CCCCCSHHHHHHHHHHHHHTTCCSCEEEECSTTSSHHHHHHHHHHHST
T ss_pred CEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 958629999999999999968899789989998179999999999658
No 125
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.27 E-value=0.021 Score=27.61 Aligned_cols=39 Identities=28% Similarity=0.331 Sum_probs=30.9
Q ss_pred EEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 399999-18999488999999999842289988999992899
Q 000701 175 GIIGVY-GMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQT 215 (1344)
Q Consensus 175 ~vi~I~-G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~ 215 (1344)
++|+|+ |-||+||||+|..++.....+ -..+..++....
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~--g~~VlliD~D~~ 41 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQL--GHDVTIVDADIT 41 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHT--TCCEEEEECCCS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHC--CCCEEEEECCCC
T ss_conf 7999979999980999999999999968--998999959899
No 126
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=95.24 E-value=0.0077 Score=30.31 Aligned_cols=27 Identities=15% Similarity=0.159 Sum_probs=22.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
++..|.|.|+.|.||||+|+.+++...
T Consensus 2 ~Pm~I~i~GppGsGKsT~a~~La~~~~ 28 (189)
T d1zaka1 2 DPLKVMISGAPASGKGTQCELIKTKYQ 28 (189)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 972999988999998999999999879
No 127
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.23 E-value=0.008 Score=30.20 Aligned_cols=27 Identities=30% Similarity=0.316 Sum_probs=23.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+.++|.|.|++|.||||+|+.++....
T Consensus 7 ~~~iI~l~G~pGSGKsT~a~~La~~~g 33 (194)
T d3adka_ 7 KSKIIFVVGGPGSGKGTQCEKIVQKYG 33 (194)
T ss_dssp TSCEEEEEECTTSSHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 782899989999987999999999869
No 128
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.22 E-value=0.034 Score=26.29 Aligned_cols=33 Identities=15% Similarity=0.201 Sum_probs=26.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCE
Q ss_conf 9739999918999488999999999842289988
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQ 206 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~ 206 (1344)
+...|+|-|+.|+||||+++.+.+....+. +..
T Consensus 2 rG~lI~ieG~dGsGKsT~~~~L~~~L~~~g-~~v 34 (209)
T d1nn5a_ 2 RGALIVLEGVDRAGKSTQSRKLVEALCAAG-HRA 34 (209)
T ss_dssp CCCEEEEEESTTSSHHHHHHHHHHHHHHTT-CCE
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCC-CCE
T ss_conf 805999989988899999999999998779-968
No 129
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=95.22 E-value=0.026 Score=26.97 Aligned_cols=30 Identities=23% Similarity=0.057 Sum_probs=25.6
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 199739999918999488999999999842
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
.+..+.+.++|++|+|||++|..+++....
T Consensus 151 ~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~ 180 (362)
T d1svma_ 151 IPKKRYWLFKGPIDSGKTTLAAALLELCGG 180 (362)
T ss_dssp CTTCCEEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 997676999899998889999999998599
No 130
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=95.20 E-value=0.017 Score=28.16 Aligned_cols=71 Identities=20% Similarity=0.332 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHHHH--------C------CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC-----
Q ss_conf 62120989999999987--------1------9973999991899948899999999984228998899999289-----
Q 000701 154 AFESRFSTLRDIRNALT--------N------ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ----- 214 (1344)
Q Consensus 154 ~~~gR~~~~~~l~~~l~--------~------~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~----- 214 (1344)
.++|-++.++.+.-.+. . -..+=|.++||.|+|||.||+.++....+- | +-+.++.
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VP--F---v~~daT~fTeaG 89 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAP--F---IKVEATKFTEVG 89 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCC--E---EEEEGGGGC---
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCC--E---EEEECCEEEECC
T ss_conf 02280899999999999999886236544444565647998999988999999999873898--8---986255114111
Q ss_pred --CCCHHHHHHHHHHHH
Q ss_conf --999999999999995
Q 000701 215 --TPNIKDIQKEIAEKL 229 (1344)
Q Consensus 215 --~~~~~~~~~~i~~~l 229 (1344)
..+++.+.+.+....
T Consensus 90 YvG~DVesii~~L~~~a 106 (443)
T d1g41a_ 90 YVGKEVDSIIRDLTDSA 106 (443)
T ss_dssp -CCCCTHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHH
T ss_conf 11044457899999987
No 131
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.14 E-value=0.0071 Score=30.54 Aligned_cols=25 Identities=28% Similarity=0.429 Sum_probs=21.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999918999488999999999842
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
.|+|+|+.|+||||+++.+......
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~ 26 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSS 26 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 1999999999999999999974887
No 132
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=95.04 E-value=0.0093 Score=29.80 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=21.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|.|.|++|.||||+|+.++....
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~ 25 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999998999999999879
No 133
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.96 E-value=0.049 Score=25.30 Aligned_cols=32 Identities=25% Similarity=0.401 Sum_probs=25.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 999991899948899999999984228998899
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKERKLFDQVV 208 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~ 208 (1344)
.|+|-|.-|+||||+++.+......+. +..+.
T Consensus 2 lI~ieG~dGsGKST~~~~L~~~l~~~g-~~v~~ 33 (208)
T d1gsia_ 2 LIAIEGVDGAGKRTLVEKLSGAFRAAG-RSVAT 33 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTT-CCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEE
T ss_conf 899989987899999999999998789-97899
No 134
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=94.91 E-value=0.014 Score=28.68 Aligned_cols=26 Identities=23% Similarity=0.299 Sum_probs=21.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
..++| |.|++|.||||+|+.++....
T Consensus 3 ~~rii-l~G~pGSGKsT~a~~La~~~g 28 (190)
T d1ak2a1 3 GVRAV-LLGPPGAGKGTQAPKLAKNFC 28 (190)
T ss_dssp CCEEE-EECCTTSSHHHHHHHHHHHHT
T ss_pred CCEEE-EECCCCCCHHHHHHHHHHHHC
T ss_conf 63899-989999988999999999869
No 135
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.89 E-value=0.009 Score=29.88 Aligned_cols=26 Identities=31% Similarity=0.409 Sum_probs=22.3
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 39999918999488999999999842
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
+.|.|+|+.|+|||||++.+......
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~ 27 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPD 27 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 76999899999989999999974886
No 136
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.80 E-value=0.043 Score=25.65 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=25.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 99739999918999488999999999842
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
++.+.|+|-|+-|+||||+++.+......
T Consensus 1 ~kGk~I~iEG~DGsGKST~~~~L~~~L~~ 29 (214)
T d1tmka_ 1 GRGKLILIEGLDRTGKTTQCNILYKKLQP 29 (214)
T ss_dssp CCCCEEEEEESTTSSHHHHHHHHHHHTTT
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 97689999899888699999999999971
No 137
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=94.79 E-value=0.016 Score=28.35 Aligned_cols=25 Identities=36% Similarity=0.509 Sum_probs=22.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999918999488999999999842
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
||+|+|+.|.|||||...+.+....
T Consensus 2 vi~v~G~~GsGKTTLl~~ll~~~~~ 26 (244)
T d1yrba1 2 IVVFVGTAGSGKTTLTGEFGRYLED 26 (244)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8999918998399999999998843
No 138
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.78 E-value=0.012 Score=29.13 Aligned_cols=24 Identities=25% Similarity=0.250 Sum_probs=21.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|.|.|++|+||||+|+.++....
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g 25 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLG 25 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999997999999999989
No 139
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=94.77 E-value=0.012 Score=29.07 Aligned_cols=24 Identities=25% Similarity=0.342 Sum_probs=21.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|.|.|++|.||||+|+.++....
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g 25 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYG 25 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899988999987999999999879
No 140
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.75 E-value=0.013 Score=28.94 Aligned_cols=25 Identities=20% Similarity=0.453 Sum_probs=21.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
++|.|+|+.|+||||+++.+.....
T Consensus 3 ~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 3 RVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 4999989999999999999984589
No 141
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.73 E-value=0.046 Score=25.47 Aligned_cols=38 Identities=29% Similarity=0.415 Sum_probs=29.8
Q ss_pred CEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 7399999-189994889999999998422899889999928
Q 000701 174 AGIIGVY-GMGGIGKTTLVKAVARQAKERKLFDQVVFSEVS 213 (1344)
Q Consensus 174 ~~vi~I~-G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~ 213 (1344)
.++|+|+ +-||+||||+|..++.....+ -..++.++..
T Consensus 2 ~~vIav~~~kGGvGKTtia~nLA~~la~~--g~~VlliD~D 40 (237)
T d1g3qa_ 2 GRIISIVSGKGGTGKTTVTANLSVALGDR--GRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHT--TCCEEEEECC
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECC
T ss_conf 82999989999881999999999999968--9989999498
No 142
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.71 E-value=0.014 Score=28.77 Aligned_cols=27 Identities=22% Similarity=0.346 Sum_probs=24.0
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+++.|+|-|.-|+||||+++.+.....
T Consensus 1 ~pk~IviEG~~GsGKST~~~~L~~~l~ 27 (241)
T d2ocpa1 1 GPRRLSIEGNIAVGKSTFVKLLTKTYP 27 (241)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHHHCT
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 981999989988859999999999873
No 143
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.67 E-value=0.068 Score=24.42 Aligned_cols=100 Identities=14% Similarity=0.176 Sum_probs=53.4
Q ss_pred HHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-----CCC-CEEEEEECCCCCC-HHHHHHHHHHHHCCC----
Q ss_conf 999987-1997399999189994889999999998422-----899-8899999289999-999999999995354----
Q 000701 165 IRNALT-NANAGIIGVYGMGGIGKTTLVKAVARQAKER-----KLF-DQVVFSEVSQTPN-IKDIQKEIAEKLGLI---- 232 (1344)
Q Consensus 165 l~~~l~-~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~-----~~f-~~~~wv~~~~~~~-~~~~~~~i~~~l~~~---- 232 (1344)
.++.+. -.....+.|.|.+|+|||+++..+....... ..- ..+++.-+.+... ..++.+.....-...
T Consensus 58 aID~l~pig~GQr~~If~~~g~GKt~ll~~~~~~~~~~~~~~~~~~~~~~v~~~IGer~~E~~e~~~~~~~~~~~~~tvv 137 (285)
T d2jdia3 58 AVDSLVPIGRGQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLTDADAMKYTIV 137 (285)
T ss_dssp HHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHHHTHHHHTSSCTTTCCEEEEEEESCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred EEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCCCEEE
T ss_conf 77434676678778765688888589999999757764156544563289996307638789999998614561200499
Q ss_pred ---CCCCCHHH------HHHHHHHHHH-CCCEEEEEEECCCC
Q ss_conf ---45331799------9999999998-39819999929998
Q 000701 233 ---LHEETVSR------RASRLYERLK-EEKKILVVLDNLWK 264 (1344)
Q Consensus 233 ---~~~~~~~~------~~~~l~~~l~-~~~~~LlVlDdv~~ 264 (1344)
...+.... ....+-+++. ++++.|+++||+-.
T Consensus 138 v~~ts~~~~~~r~~~~~~a~tiAEyfrd~G~~VLll~Dsltr 179 (285)
T d2jdia3 138 VSATASDAAPLQYLAPYSGCSMGEYFRDNGKHALIIYDDLSK 179 (285)
T ss_dssp EEECTTSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHH
T ss_conf 997899999999999999999999999769967999717289
No 144
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=94.65 E-value=0.017 Score=28.23 Aligned_cols=26 Identities=19% Similarity=0.280 Sum_probs=21.6
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.-.|.|.|++|.||||+|+.++....
T Consensus 6 ~mrIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHBC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 21699988999987999999999979
No 145
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.45 E-value=0.076 Score=24.10 Aligned_cols=37 Identities=27% Similarity=0.408 Sum_probs=28.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 73999991899948899999999984228998899999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSE 211 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~ 211 (1344)
.+.|+|-|+.|+||||+++.+........ +..+.+..
T Consensus 2 gkfIviEG~dGsGKsT~~~~L~~~L~~~g-~~~~~~~~ 38 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVVVETLEQLG-IRDMVFTR 38 (210)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCC-CCEEEEEC
T ss_conf 87899989988879999999999999679-97399832
No 146
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.41 E-value=0.016 Score=28.26 Aligned_cols=24 Identities=21% Similarity=0.236 Sum_probs=20.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|.|.|++|.||||+|+.++....
T Consensus 4 rIvl~G~pGSGKtT~a~~La~~~g 27 (180)
T d1akya1 4 RMVLIGPPGAGKGTQAPNLQERFH 27 (180)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 999989999998999999999969
No 147
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.32 E-value=0.018 Score=27.98 Aligned_cols=26 Identities=12% Similarity=0.327 Sum_probs=22.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.+.|.|+|+.|+||+||++.+..+..
T Consensus 3 ~k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 77199999899999999999997097
No 148
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=94.23 E-value=0.02 Score=27.73 Aligned_cols=23 Identities=35% Similarity=0.476 Sum_probs=19.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHH
Q ss_conf 97399999189994889999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVA 195 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~ 195 (1344)
.+-+|+|+|+.|.||||+|..+-
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~ 24 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR 24 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHH
T ss_conf 99899998988778999999999
No 149
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.22 E-value=0.019 Score=27.86 Aligned_cols=24 Identities=21% Similarity=0.127 Sum_probs=21.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|.|.|++|.||||+|+.++....
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~ 25 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 899987999998999999999869
No 150
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.11 E-value=0.024 Score=27.22 Aligned_cols=26 Identities=23% Similarity=0.374 Sum_probs=22.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
..++.|+|+.|+|||||.+.+.....
T Consensus 2 G~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 80999999999999999999986398
No 151
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.10 E-value=0.09 Score=23.64 Aligned_cols=49 Identities=18% Similarity=0.204 Sum_probs=36.9
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC----CCCCEEEEEECCCCCCHHHH
Q ss_conf 97399999189994889999999998422----89988999992899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKER----KLFDQVVFSEVSQTPNIKDI 221 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~----~~f~~~~wv~~~~~~~~~~~ 221 (1344)
...++.|.|++|.|||++|.+++...... .....+.|+.....+.....
T Consensus 36 ~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (258)
T d1v5wa_ 36 SMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRL 88 (258)
T ss_dssp SSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHH
T ss_conf 89799998899887889999999999744431666624887401777789999
No 152
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.07 E-value=0.088 Score=23.70 Aligned_cols=56 Identities=18% Similarity=0.262 Sum_probs=36.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCC--------------CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9739999918999488999999999842289--------------98899999289999999999999995
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKL--------------FDQVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~--------------f~~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
...++.|.|.+|+|||++|.+++........ ...+.|+......+.... ..+....
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~e~~~~~~~~-~~~~~~~ 102 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYIDTEGTFRPERI-MQMAEHA 102 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHTTCGGGEECCTTTSCTTTTSSEEEEEEESSSCCCHHHH-HHHHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHCCCEEEEEEECCCCCHHHH-HHHHHHC
T ss_conf 885999991799998999999999998537974377530031003851999995687688999-9888522
No 153
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=94.04 E-value=0.072 Score=24.24 Aligned_cols=31 Identities=26% Similarity=0.297 Sum_probs=26.1
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 9973999991899948899999999984228
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERK 202 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~ 202 (1344)
....+|.+.|.=|.||||+++.+++...++.
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~~ 61 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQG 61 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCCS
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCCC
T ss_conf 9982999966877658899999876422346
No 154
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=94.03 E-value=0.07 Score=24.33 Aligned_cols=131 Identities=14% Similarity=0.027 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHHHHHHCC---CC-
Q ss_conf 9899999999871997399999189994889999999998422-899889999928999999999999999535---44-
Q 000701 159 FSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKER-KLFDQVVFSEVSQTPNIKDIQKEIAEKLGL---IL- 233 (1344)
Q Consensus 159 ~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~-~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~---~~- 233 (1344)
+..+..+...+ ..++..|.|++|.||||.+..+....... ..-...+.+..........+...+...... ..
T Consensus 151 ~~Q~~A~~~al---~~~~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~~~~~ 227 (359)
T d1w36d1 151 NWQKVAAAVAL---TRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDE 227 (359)
T ss_dssp CHHHHHHHHHH---TBSEEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSSCCSC
T ss_pred CHHHHHHHHHH---CCCEEEEECCCCCCCEEHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 38999999997---088599976898875216999999999987526982898437599999999888777764581044
Q ss_pred -------CCCCHHHH--HHHHHHHHHC-----CCEEEEEEECCCCCCC--CCCCCCCCCCCCCCEEEEEEECCHHHHH
Q ss_conf -------53317999--9999999983-----9819999929998532--0112676789998238999825867887
Q 000701 234 -------HEETVSRR--ASRLYERLKE-----EKKILVVLDNLWKCLN--LETVGIPYGDDHKGCKILLTSRDRSVLL 295 (1344)
Q Consensus 234 -------~~~~~~~~--~~~l~~~l~~-----~~~~LlVlDdv~~~~~--~~~l~~~l~~~~~~~~iivTtR~~~v~~ 295 (1344)
........ ...-...+.. .+--++|+|++...+. ...+...+ ..+.++|+.--..+..+
T Consensus 228 ~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~---~~~~~lILvGD~~QLpp 302 (359)
T d1w36d1 228 QKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDAL---PDHARVIFLGDRDQLAS 302 (359)
T ss_dssp CCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTC---CTTCEEEEEECTTSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEHHHHCCCHHHHHHHHHHH---CCCCEEEEECCHHHCCC
T ss_conf 5542013455789987631000677775436665413465332144899999999872---59998999777221668
No 155
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=93.73 E-value=0.012 Score=29.03 Aligned_cols=27 Identities=22% Similarity=0.210 Sum_probs=22.3
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.++-+|+|-|..|+||||+++.+.+..
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l 33 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYK 33 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGT
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 986199988999988899999999870
No 156
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=93.19 E-value=0.055 Score=25.01 Aligned_cols=28 Identities=29% Similarity=0.192 Sum_probs=24.3
Q ss_pred EEEEEECCC-CCCHHHHHHHHHHHHHHCC
Q ss_conf 399999189-9948899999999984228
Q 000701 175 GIIGVYGMG-GIGKTTLVKAVARQAKERK 202 (1344)
Q Consensus 175 ~vi~I~G~~-G~GKTtLa~~~~~~~~~~~ 202 (1344)
+.+.|.|-| |+||||++..++.....+.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G 30 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAG 30 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCC
T ss_conf 51999989999429999999999999779
No 157
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.15 E-value=0.015 Score=28.44 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=22.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.+.|+|-|+.|+||||+|+.+.+...
T Consensus 2 ~k~I~ieG~dGsGKST~~~~L~~~l~ 27 (241)
T d1p5zb_ 2 IKKISIEGNIAAGKSTFVNILKQLCE 27 (241)
T ss_dssp CEEEEEECSTTSSHHHHHTTTGGGCT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 98899987888779999999999973
No 158
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=92.88 E-value=0.14 Score=22.38 Aligned_cols=41 Identities=20% Similarity=0.084 Sum_probs=28.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 973999991899948899999999984228998899999289
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQ 214 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~ 214 (1344)
...++.|.|..|+|||++|.+++....... -..++|+....
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~-~~~~~~~s~e~ 65 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEF-DEPGVFVTFEE 65 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHH-CCCEEEEESSS
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCC
T ss_conf 983999994799999999999999999856-88742012667
No 159
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.71 E-value=0.05 Score=25.22 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=23.3
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973999991899948899999999984
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
....+++|+|+.|.|||||++.+..-..
T Consensus 60 ~~Ge~vaivG~nGsGKSTLl~~i~Gl~~ 87 (281)
T d1r0wa_ 60 EKGEMLAITGSTGSGKTSLLMLILGELE 87 (281)
T ss_dssp CTTCEEEEEESTTSSHHHHHHHHHTSSC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 5999999998999829999999957974
No 160
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=92.69 E-value=0.047 Score=25.43 Aligned_cols=27 Identities=22% Similarity=0.401 Sum_probs=22.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.....++|+|+.|.|||||++.+..-.
T Consensus 39 ~~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 39 PAGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp CTTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 599999999999985999999986216
No 161
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.61 E-value=0.07 Score=24.33 Aligned_cols=51 Identities=18% Similarity=0.246 Sum_probs=32.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCC--------CEEEEEECCCCCCHHHHHHHHH
Q ss_conf 7399999189994889999999998422899--------8899999289999999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKERKLF--------DQVVFSEVSQTPNIKDIQKEIA 226 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f--------~~~~wv~~~~~~~~~~~~~~i~ 226 (1344)
..++.|.|.+|+|||++|.+++........| ..++|+..-. ....+...+.
T Consensus 29 g~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~--~~~~~~~Rl~ 87 (274)
T d1nlfa_ 29 GTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAED--PPTAIHHRLH 87 (274)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSS--CHHHHHHHHH
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC--HHHHHHHHHH
T ss_conf 9589999289998999999999999769972111235787368985123--4999999999
No 162
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.48 E-value=0.045 Score=25.50 Aligned_cols=26 Identities=27% Similarity=0.418 Sum_probs=21.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 99739999918999488999999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
+..+++.|.|.-|.||||+.+++...
T Consensus 1 ~~iPv~iitGFLGaGKTTll~~lL~~ 26 (222)
T d1nija1 1 NPIAVTLLTGFLGAGKTTLLRHILNE 26 (222)
T ss_dssp CCEEEEEEEESSSSSCHHHHHHHHHS
T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 99788998648889999999999856
No 163
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.39 E-value=0.053 Score=25.10 Aligned_cols=22 Identities=27% Similarity=0.371 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|.|+|.+|+|||||...+..+.
T Consensus 3 ivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 3 ILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999999989899999996598
No 164
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=92.36 E-value=0.064 Score=24.59 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=21.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.+|+|+|..|.||||+|+.+...+
T Consensus 2 ~iIgiTG~igSGKsTva~~l~e~~ 25 (241)
T d1deka_ 2 KLIFLSGVKRSGKDTTADFIMSNY 25 (241)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHS
T ss_pred EEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 899997999988999999999868
No 165
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=92.36 E-value=0.055 Score=25.00 Aligned_cols=20 Identities=40% Similarity=0.539 Sum_probs=17.9
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 99999189994889999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVA 195 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~ 195 (1344)
+|+|+|+.|.||||+|+.+.
T Consensus 5 iIgitG~igSGKStv~~~l~ 24 (208)
T d1vhta_ 5 IVALTGGIGSGKSTVANAFA 24 (208)
T ss_dssp EEEEECCTTSCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99978988688999999999
No 166
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=92.33 E-value=0.061 Score=24.72 Aligned_cols=27 Identities=30% Similarity=0.364 Sum_probs=22.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.....++|+|+.|.|||||++.+..-.
T Consensus 26 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 26 QPNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp CTTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 599999999999997999999999960
No 167
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.30 E-value=0.057 Score=24.87 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=22.7
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.....++|+|+.|.|||||++.+..-.
T Consensus 38 ~~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 38 RPGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 499899999999984999999986143
No 168
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=92.28 E-value=0.054 Score=25.03 Aligned_cols=26 Identities=38% Similarity=0.626 Sum_probs=22.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....++|+|+.|.|||||++.+..-.
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999999998999999997357
No 169
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=92.27 E-value=0.081 Score=23.93 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=22.9
Q ss_pred HHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 999987-19973999991899948899999999
Q 000701 165 IRNALT-NANAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 165 l~~~l~-~~~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
+...+. .++..-|+++|.+|+|||||..++..
T Consensus 3 ~~~~~~~~~k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 3 VLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp HHHHHTCTTCCEEEEEEEETTSSHHHHHHHHSC
T ss_pred HHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 677555347777899999999898999999967
No 170
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=92.25 E-value=0.05 Score=25.23 Aligned_cols=37 Identities=19% Similarity=0.387 Sum_probs=26.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 9973999991899948899999999984228998899999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSE 211 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~ 211 (1344)
....+++|+|+.|.|||||.+.++.-.+ .-.+.+++.
T Consensus 29 ~~Ge~~~iiG~sGsGKSTLl~~i~gl~~---p~sG~I~~~ 65 (230)
T d1l2ta_ 29 KEGEFVSIMGPSGSGKSTMLNIIGCLDK---PTEGEVYID 65 (230)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHTTSSC---CSEEEEEET
T ss_pred CCCCEEEEECCCCCCCCHHHHHCCCCCC---CCCCEEEEC
T ss_conf 4997999988999982165575068877---776626999
No 171
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=92.19 E-value=0.061 Score=24.71 Aligned_cols=26 Identities=27% Similarity=0.424 Sum_probs=22.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
...+++|+|+.|.||||+++.++.-.
T Consensus 28 ~Ge~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 28 DGEFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99899999999980999999996487
No 172
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=92.16 E-value=0.052 Score=25.15 Aligned_cols=28 Identities=36% Similarity=0.599 Sum_probs=23.2
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973999991899948899999999984
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
....+++|+|+.|.|||||++.++.-.+
T Consensus 29 ~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~ 56 (240)
T d3dhwc1 29 PAGQIYGVIGASGAGKSTLIRCVNLLER 56 (240)
T ss_dssp CSSCEEEEEESTTSSHHHHHHHHTTSSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHCCCCC
T ss_conf 6997999989998988899998758863
No 173
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=92.12 E-value=0.064 Score=24.57 Aligned_cols=25 Identities=16% Similarity=0.393 Sum_probs=21.7
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 9973999991899948899999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
++.+.|+|+|..|+|||||...+.+
T Consensus 21 ~~~~~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 21 GGLPEIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp SCCCEEEEEEBTTSSHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHCC
T ss_conf 8998999989999879999998529
No 174
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.10 E-value=0.064 Score=24.55 Aligned_cols=24 Identities=29% Similarity=0.394 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
-|.++|.+|+|||+|..++.....
T Consensus 4 KivllG~~~vGKTsl~~r~~~~~~ 27 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKIIHE 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 999999999888999998840897
No 175
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.08 E-value=0.18 Score=21.74 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=33.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCC----CCCEEEEEECCCCCCHHHH
Q ss_conf 973999991899948899999999984228----9988999992899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERK----LFDQVVFSEVSQTPNIKDI 221 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~----~f~~~~wv~~~~~~~~~~~ 221 (1344)
...++.|.|++|+|||++|.+++....... .+....++..........+
T Consensus 22 ~G~v~~i~G~~GsGKT~l~l~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (242)
T d1n0wa_ 22 TGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERL 74 (242)
T ss_dssp TTSEEEEECCTTSSHHHHHHHHHHHTTSCGGGTCCSSEEEEEESSSCCCHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHH
T ss_conf 99799999589999999999999999886244665520100355665589999
No 176
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=92.07 E-value=0.068 Score=24.41 Aligned_cols=37 Identities=22% Similarity=0.341 Sum_probs=26.8
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 9973999991899948899999999984228998899999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSE 211 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~ 211 (1344)
....+++|+|+.|.|||||.+.++.-.+ .-.+.+++.
T Consensus 24 ~~Gei~~liGpsGsGKSTLl~~i~Gl~~---p~sG~I~i~ 60 (232)
T d2awna2 24 HEGEFVVFVGPSGCGKSTLLRMIAGLET---ITSGDLFIG 60 (232)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCC---CCCCEEEEC
T ss_conf 6998999998999829999999965878---888889999
No 177
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.02 E-value=0.057 Score=24.87 Aligned_cols=21 Identities=24% Similarity=0.407 Sum_probs=18.9
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|.|+|.+|+|||+|+.++.++
T Consensus 6 ivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999993999999999629
No 178
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=92.02 E-value=0.055 Score=24.99 Aligned_cols=36 Identities=19% Similarity=0.388 Sum_probs=26.1
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 997399999189994889999999998422899889999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFS 210 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv 210 (1344)
....+++|+|+.|.|||||++.+..-. ....+.+++
T Consensus 26 ~~GEi~~iiG~sGsGKSTLl~~i~Gl~---~p~~G~I~~ 61 (258)
T d1b0ua_ 26 RAGDVISIIGSSGSGKSTFLRCINFLE---KPSEGAIIV 61 (258)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSS---CCSEEEEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC---CCCCCCEEE
T ss_conf 699799999899982999999997476---678997799
No 179
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.00 E-value=0.058 Score=24.83 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.|+|.+|+|||+|+.++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~~~ 28 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEKK 28 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999997299
No 180
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.89 E-value=0.06 Score=24.74 Aligned_cols=22 Identities=32% Similarity=0.323 Sum_probs=19.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|.++|.+|+|||+|..++.+..
T Consensus 5 v~liG~~~vGKTsLl~~~~~~~ 26 (165)
T d1z06a1 5 IIVIGDSNVGKTCLTYRFCAGR 26 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999929899999997399
No 181
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=91.86 E-value=0.059 Score=24.81 Aligned_cols=21 Identities=38% Similarity=0.493 Sum_probs=18.4
Q ss_pred EEEEEECCCCCCHHHHHHHHH
Q ss_conf 399999189994889999999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVA 195 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~ 195 (1344)
-+|+|+|..|.||||+|+.+-
T Consensus 3 ~iIgITG~igSGKStv~~~l~ 23 (205)
T d1jjva_ 3 YIVGLTGGIGSGKTTIANLFT 23 (205)
T ss_dssp EEEEEECSTTSCHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHH
T ss_conf 899988888788999999999
No 182
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.76 E-value=0.064 Score=24.57 Aligned_cols=21 Identities=24% Similarity=0.585 Sum_probs=18.8
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|+++|.+|+|||+|+.++.+.
T Consensus 5 v~liG~~~vGKSsLi~rl~~~ 25 (164)
T d1z2aa1 5 MVVVGNGAVGKSSMIQRYCKG 25 (164)
T ss_dssp EEEECSTTSSHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998995989999999829
No 183
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.75 E-value=0.077 Score=24.06 Aligned_cols=27 Identities=26% Similarity=0.422 Sum_probs=22.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....+++|+|+.|.|||||.+.+..-.
T Consensus 30 ~~Ge~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 30 KDGEFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 799899999999982999999997589
No 184
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=91.62 E-value=0.068 Score=24.42 Aligned_cols=23 Identities=30% Similarity=0.449 Sum_probs=19.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+|+|.+|+|||||...+....
T Consensus 7 kI~ivG~~~vGKSSLi~~~~~~~ 29 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRLQVGE 29 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989999999996798
No 185
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.56 E-value=0.069 Score=24.38 Aligned_cols=22 Identities=32% Similarity=0.468 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.|+|.+|+|||+|+.++...
T Consensus 5 KivlvG~~~vGKTsLi~r~~~~ 26 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCEN 26 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999993989999999829
No 186
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.54 E-value=0.069 Score=24.36 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=19.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|+++|.+|+|||+|+.++.+..
T Consensus 3 v~vvG~~~vGKTsLi~r~~~~~ 24 (164)
T d1yzqa1 3 LVFLGEQSVGKTSLITRFMYDS 24 (164)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999989909899999998499
No 187
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.52 E-value=0.069 Score=24.37 Aligned_cols=23 Identities=30% Similarity=0.457 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.|+|.+|+|||+|..++.+..
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~~ 30 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQSY 30 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999979969899999997399
No 188
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.49 E-value=0.071 Score=24.28 Aligned_cols=23 Identities=22% Similarity=0.393 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|+.++.+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~~ 30 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKGQ 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999949899999998598
No 189
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.43 E-value=0.072 Score=24.25 Aligned_cols=23 Identities=17% Similarity=0.417 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+|+|.+|+|||+|..++.++.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~~ 28 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVEDS 28 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999989949999999997398
No 190
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.32 E-value=0.075 Score=24.13 Aligned_cols=23 Identities=30% Similarity=0.525 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++.++.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~~ 27 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTGT 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989939999999997199
No 191
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.31 E-value=0.085 Score=23.81 Aligned_cols=24 Identities=25% Similarity=0.282 Sum_probs=20.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.+.|+|+|.+|+|||||...+...
T Consensus 3 ~p~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 3 QPSIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 889999999998899999999679
No 192
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.30 E-value=0.076 Score=24.12 Aligned_cols=22 Identities=27% Similarity=0.655 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|.++|.+|+|||+|..++.+..
T Consensus 5 i~lvG~~~vGKTsli~r~~~~~ 26 (168)
T d2atva1 5 LAIFGRAGVGKSALVVRFLTKR 26 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999989978999999997398
No 193
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.29 E-value=0.076 Score=24.11 Aligned_cols=23 Identities=35% Similarity=0.517 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|.+|+|||+|.+++.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~~ 29 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQGL 29 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999919899999997299
No 194
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.24 E-value=0.078 Score=24.03 Aligned_cols=21 Identities=29% Similarity=0.412 Sum_probs=19.0
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|.++|.+|+|||||...+...
T Consensus 8 i~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 8 ILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEECSTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999999991989999999739
No 195
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=91.21 E-value=0.081 Score=23.95 Aligned_cols=33 Identities=21% Similarity=0.151 Sum_probs=25.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 399999189994889999999998422899889999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFS 210 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv 210 (1344)
.+++|+|+.|.|||||.+.++.-.+ .-.+.+++
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~---p~~G~I~~ 57 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVK---PDRGEVRL 57 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSC---CSEEEEEE
T ss_pred EEEEEECCCCCHHHHHHHHHHCCCC---CCCEEEEE
T ss_conf 7999997999809999999973999---89628999
No 196
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.19 E-value=0.08 Score=23.98 Aligned_cols=22 Identities=32% Similarity=0.581 Sum_probs=19.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|.++|..|+|||+|..++....
T Consensus 6 ivvvG~~~vGKTsli~r~~~~~ 27 (167)
T d1c1ya_ 6 LVVLGSGGVGKSALTVQFVQGI 27 (167)
T ss_dssp EEEECSTTSSHHHHHHHHHHCC
T ss_pred EEEECCCCCCHHHHHHHHHCCC
T ss_conf 9999989989999999997098
No 197
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.16 E-value=0.063 Score=24.61 Aligned_cols=21 Identities=38% Similarity=0.852 Sum_probs=18.6
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|+++|.+|+|||+|..++...
T Consensus 5 i~viG~~~vGKTsLi~r~~~~ 25 (171)
T d2erxa1 5 VAVFGAGGVGKSSLVLRFVKG 25 (171)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999998997989999999709
No 198
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.15 E-value=0.08 Score=23.97 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+|+|.+|+|||||..++....
T Consensus 8 KivvvG~~~vGKTsli~~l~~~~ 30 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDDT 30 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999909899999996198
No 199
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.06 E-value=0.076 Score=24.11 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=18.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.|+|.+|+|||||+..+.+.
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~~ 28 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTDN 28 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999991989999999619
No 200
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.06 E-value=0.083 Score=23.88 Aligned_cols=23 Identities=26% Similarity=0.377 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|+.++....
T Consensus 7 KI~lvG~~~vGKTsll~~~~~~~ 29 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIEKK 29 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999909999999997098
No 201
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.03 E-value=0.084 Score=23.83 Aligned_cols=22 Identities=32% Similarity=0.398 Sum_probs=19.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.|+|.+|+|||+|..++...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999997999999999749
No 202
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.01 E-value=0.084 Score=23.84 Aligned_cols=22 Identities=27% Similarity=0.499 Sum_probs=19.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+++|.+|+|||||..++.+.
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~~ 25 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVND 25 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999996989999999709
No 203
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.99 E-value=0.085 Score=23.82 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=19.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.|+|..|+|||+|..++.+..
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~~ 26 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKDQ 26 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989938899999997199
No 204
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.97 E-value=0.085 Score=23.79 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=20.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..-|+|+|..|+|||+|..++.+.
T Consensus 4 ~~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 4 SRKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHS
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 338999998992989999999719
No 205
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.94 E-value=0.085 Score=23.80 Aligned_cols=23 Identities=30% Similarity=0.453 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++....
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~~ 29 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQSY 29 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 89999999979999999997399
No 206
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.84 E-value=0.062 Score=24.66 Aligned_cols=26 Identities=35% Similarity=0.602 Sum_probs=22.5
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+..+++|+|+-|.|||||.+.++.-.
T Consensus 26 ~Gei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp TTCCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 99899999999971999999996620
No 207
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.79 E-value=0.091 Score=23.61 Aligned_cols=22 Identities=27% Similarity=0.542 Sum_probs=19.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+|+|..|+|||||+.++.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999990989999999829
No 208
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.77 E-value=0.09 Score=23.64 Aligned_cols=23 Identities=39% Similarity=0.462 Sum_probs=19.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.|+|.+|+|||+|..++.+..
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~~ 33 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYANDA 33 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999989999999996499
No 209
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.76 E-value=0.092 Score=23.58 Aligned_cols=23 Identities=17% Similarity=0.358 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+++|..|+|||+|..++....
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~~ 27 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSND 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999919899999997299
No 210
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.76 E-value=0.073 Score=24.23 Aligned_cols=21 Identities=24% Similarity=0.485 Sum_probs=18.4
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|+++|..|+|||+|+.++...
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCCCHHHHHHHHHCC
T ss_conf 999898993999999998188
No 211
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.76 E-value=0.1 Score=23.29 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=20.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+-|+|+|.+|+|||||...+....
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~~ 24 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTGQ 24 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHSC
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 989999999989899999998099
No 212
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.75 E-value=0.092 Score=23.59 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.++|..|+|||+|..++...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999999996789999999868
No 213
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.74 E-value=0.099 Score=23.38 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=18.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.++|.+|+|||+|..++...
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~ 25 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRII 25 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999999889999999679
No 214
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.71 E-value=0.094 Score=23.53 Aligned_cols=23 Identities=30% Similarity=0.407 Sum_probs=19.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+|+|.+|+|||+|+.++.+..
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~~ 30 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDGA 30 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999929999999997199
No 215
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=90.64 E-value=0.076 Score=24.09 Aligned_cols=27 Identities=22% Similarity=0.316 Sum_probs=23.0
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....+++|+|+.|.||||+.+.+..-.
T Consensus 24 ~~Ge~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 24 ESGEYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp CTTCEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 799899999899982999999996476
No 216
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.61 E-value=0.096 Score=23.47 Aligned_cols=22 Identities=32% Similarity=0.424 Sum_probs=18.9
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|+++|..|+|||+|..++....
T Consensus 6 vvllG~~~vGKTSli~r~~~~~ 27 (191)
T d2ngra_ 6 CVVVGDGAVGKTCLLISYTTNK 27 (191)
T ss_dssp EEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999999969999999997199
No 217
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.60 E-value=0.084 Score=23.85 Aligned_cols=20 Identities=35% Similarity=0.514 Sum_probs=17.6
Q ss_pred EEEEECCCCCCHHHHHHHHH
Q ss_conf 99999189994889999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVA 195 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~ 195 (1344)
-|.++|.+|+|||+|..++.
T Consensus 4 KivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
T ss_conf 99999899999899999884
No 218
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.54 E-value=0.098 Score=23.40 Aligned_cols=23 Identities=30% Similarity=0.550 Sum_probs=19.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+++|..|+|||+|..++.+..
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~~ 27 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQNH 27 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999979989999999998098
No 219
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=90.46 E-value=0.087 Score=23.73 Aligned_cols=22 Identities=27% Similarity=0.446 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.|+|.+|+|||||...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHCCC
T ss_conf 9999999998999999998089
No 220
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.42 E-value=0.12 Score=22.87 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 39999918999488999999999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.-|.++|.+|+|||+|.+++...
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~ 29 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRIL 29 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
T ss_conf 77999989999889999989509
No 221
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.34 E-value=0.1 Score=23.23 Aligned_cols=23 Identities=35% Similarity=0.419 Sum_probs=19.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++.+..
T Consensus 4 KivliG~~~vGKTsli~r~~~~~ 26 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKDC 26 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999959899999997299
No 222
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=90.28 E-value=0.089 Score=23.69 Aligned_cols=28 Identities=32% Similarity=0.283 Sum_probs=23.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7399999189994889999999998422
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAKER 201 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~~~ 201 (1344)
+-.|.|-|.-|+||||+++.+.+....+
T Consensus 6 ~~rI~iEG~iGsGKSTl~~~L~~~l~~~ 33 (333)
T d1p6xa_ 6 IVRIYLDGVYGIGKSTTGRVMASAASGG 33 (333)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHSGGGCS
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 5899998886678999999999986569
No 223
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=90.21 E-value=0.084 Score=23.82 Aligned_cols=26 Identities=31% Similarity=0.538 Sum_probs=21.7
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 99739999918999488999999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.....++|+|+.|.|||||++.+..-
T Consensus 42 ~~Ge~vaivG~sGsGKSTLl~ll~gl 67 (255)
T d2hyda1 42 EKGETVAFVGMSGGGKSTLINLIPRF 67 (255)
T ss_dssp CTTCEEEEECSTTSSHHHHHTTTTTS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 39989999889998099999999712
No 224
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=90.21 E-value=0.11 Score=23.12 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=18.9
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|+++|..|+|||||+..+.+.
T Consensus 5 v~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 5 VIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999991989999999719
No 225
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=90.18 E-value=0.28 Score=20.59 Aligned_cols=87 Identities=15% Similarity=0.190 Sum_probs=48.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCC-CCCCCCH-------HHHHHH
Q ss_conf 97399999189994889999999998422899889999928999999999999999535-4453317-------999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKLGL-ILHEETV-------SRRASR 244 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~-~~~~~~~-------~~~~~~ 244 (1344)
...++.|.|.+|+|||+++.+++.+...+..+. +.+++.- .+..++...++..... ....... ......
T Consensus 34 ~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~-v~~~s~E--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (277)
T d1cr2a_ 34 GGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKK-VGLAMLE--ESVEETAEDLIGLHNRVRLRQSDSLKREIIENGKFDQ 110 (277)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCC-EEEEESS--SCHHHHHHHHHHHHTTCCGGGCHHHHHHHHHTSHHHH
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCC-EEEEEEC--CCHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHH
T ss_conf 980899994799979999999997265533663-4576401--1113577699998645871010122222145677888
Q ss_pred HHHHHHCCCEEEEEEECCC
Q ss_conf 9999983981999992999
Q 000701 245 LYERLKEEKKILVVLDNLW 263 (1344)
Q Consensus 245 l~~~l~~~~~~LlVlDdv~ 263 (1344)
..+.+. +...+.+.|...
T Consensus 111 ~~~~~~-~~~~~~~~~~~~ 128 (277)
T d1cr2a_ 111 WFDELF-GNDTFHLYDSFA 128 (277)
T ss_dssp HHHHHH-SSSCEEEECCC-
T ss_pred HHHHHH-CCCEEEEECCCC
T ss_conf 988740-352146621433
No 226
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=90.13 E-value=0.096 Score=23.48 Aligned_cols=22 Identities=41% Similarity=0.492 Sum_probs=19.0
Q ss_pred EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3999991899948899999999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
--|.++|.+|+|||||..++..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHHC
T ss_conf 7999999999899999999964
No 227
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.02 E-value=0.22 Score=21.23 Aligned_cols=33 Identities=24% Similarity=0.569 Sum_probs=24.9
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 999999987199739999918999488999999999
Q 000701 162 LRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 162 ~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
++.|.+++. .+..+++|..|+|||||...+..+
T Consensus 86 ~~~L~~~l~---~kt~~~~G~SGVGKSTLiN~L~~~ 118 (225)
T d1u0la2 86 IEELKEYLK---GKISTMAGLSGVGKSSLLNAINPG 118 (225)
T ss_dssp HHHHHHHHS---SSEEEEECSTTSSHHHHHHHHSTT
T ss_pred HHHHHHHHC---CCEEEEECCCCCCHHHHHHHHCCH
T ss_conf 766999956---980899788987788887730535
No 228
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=89.98 E-value=0.21 Score=21.40 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHH-HHHHHHHCC-CCCEEEEEECCC
Q ss_conf 8999999998719973999991899948899999-999984228-998899999289
Q 000701 160 STLRDIRNALTNANAGIIGVYGMGGIGKTTLVKA-VARQAKERK-LFDQVVFSEVSQ 214 (1344)
Q Consensus 160 ~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~-~~~~~~~~~-~f~~~~wv~~~~ 214 (1344)
.+-+++++. .. +.+.|.|.+|.||||.+.+ +++-..... .-..++.+..+.
T Consensus 14 ~eQ~~~v~~---~~-g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~ 66 (318)
T d1pjra1 14 KEQQEAVRT---TE-GPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTN 66 (318)
T ss_dssp HHHHHHHHC---CS-SCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSH
T ss_pred HHHHHHHHC---CC-CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEEECCH
T ss_conf 999999829---99-998999529866899999999999980899878937576649
No 229
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=89.92 E-value=0.12 Score=22.86 Aligned_cols=24 Identities=25% Similarity=0.407 Sum_probs=20.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
--|.++|.+|+|||+|..++.+..
T Consensus 5 ~KivlvG~~~vGKTsli~~~~~~~ 28 (168)
T d1u8za_ 5 HKVIMVGSGGVGKSALTLQFMYDE 28 (168)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 699999989958899999997299
No 230
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.79 E-value=0.11 Score=23.00 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=18.7
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|.++|.+|+|||+|+..+...
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~~ 26 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAGV 26 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHC
T ss_conf 9999998992999999999728
No 231
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.65 E-value=0.13 Score=22.68 Aligned_cols=21 Identities=29% Similarity=0.610 Sum_probs=18.9
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|.++|.+|+|||+|..++.+.
T Consensus 9 I~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 9 VILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEECCTTSSHHHHHHHHHHS
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999997999999999849
No 232
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=89.62 E-value=0.15 Score=22.33 Aligned_cols=24 Identities=25% Similarity=0.551 Sum_probs=21.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.+.|+|+|..|+|||||...+...
T Consensus 5 ~~~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 5 SGFVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEEEECSTTSSHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 769999999999999999999688
No 233
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=89.61 E-value=0.077 Score=24.08 Aligned_cols=27 Identities=33% Similarity=0.557 Sum_probs=22.9
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....+++|+|+.|.||||+.+.+..-.
T Consensus 29 ~~Ge~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 29 ENGERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CTTCEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 799899999899980999999997586
No 234
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.51 E-value=0.13 Score=22.57 Aligned_cols=23 Identities=30% Similarity=0.482 Sum_probs=19.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++.++.
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~~~ 28 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQKI 28 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989959899999997098
No 235
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.50 E-value=0.14 Score=22.53 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999189994889999999998
Q 000701 177 IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
|.++|.+|+|||+|..++.+..
T Consensus 10 i~vvG~~~vGKTsli~~l~~~~ 31 (177)
T d1x3sa1 10 ILIIGESGVGKSSLLLRFTDDT 31 (177)
T ss_dssp EEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHCC
T ss_conf 9999989908899999997199
No 236
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.45 E-value=0.14 Score=22.50 Aligned_cols=23 Identities=26% Similarity=0.442 Sum_probs=19.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++.+..
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~~~ 29 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLTGS 29 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999989978999999997197
No 237
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=89.43 E-value=0.14 Score=22.43 Aligned_cols=22 Identities=23% Similarity=0.475 Sum_probs=19.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.|+|+|..|+|||||...+...
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~~ 23 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVKK 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC-
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999899999999677
No 238
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=89.43 E-value=0.19 Score=21.63 Aligned_cols=34 Identities=18% Similarity=0.265 Sum_probs=24.5
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 99999987199739999918999488999999999
Q 000701 163 RDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 163 ~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..+..++. ++.--|.|+|.+|+|||||..++...
T Consensus 5 ~~~~~~~~-~k~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 5 TRIWRLFN-HQEHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp HHHHHHHT-TSCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred HHHHHHHC-CCEEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 99997728-98579999999998989999999668
No 239
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=89.08 E-value=0.14 Score=22.36 Aligned_cols=27 Identities=30% Similarity=0.525 Sum_probs=22.6
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 997399999189994889999999998
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....+++|+|+-|.|||||.+.+..-.
T Consensus 26 ~~Gei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 26 EEGEIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp CTTCEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 489799999999999999999996698
No 240
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=89.08 E-value=0.15 Score=22.23 Aligned_cols=23 Identities=30% Similarity=0.400 Sum_probs=19.1
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|.+|+|||+|..++....
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~~ 26 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASGQ 26 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 99999999989899999997197
No 241
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=89.03 E-value=0.13 Score=22.74 Aligned_cols=27 Identities=26% Similarity=0.436 Sum_probs=23.0
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
...+++|+|+-|.|||||++.+..-.+
T Consensus 29 ~Gei~~liG~nGaGKSTLl~~i~Gl~~ 55 (254)
T d1g6ha_ 29 KGDVTLIIGPNGSGKSTLINVITGFLK 55 (254)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 997999999999849999999977976
No 242
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.03 E-value=0.17 Score=21.91 Aligned_cols=22 Identities=27% Similarity=0.434 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+++|.+|+|||||...+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999589
No 243
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=88.82 E-value=0.15 Score=22.33 Aligned_cols=35 Identities=26% Similarity=0.361 Sum_probs=25.9
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEE
Q ss_conf 97399999189994889999999998422899889999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFS 210 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv 210 (1344)
...+++|+|+-|.|||||.+.+..-.+ ...+.+.+
T Consensus 31 ~Gei~~liGpnGaGKSTl~~~i~Gl~~---p~~G~I~~ 65 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTTTLSAIAGLVR---AQKGKIIF 65 (240)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSSC---CSEEEEEE
T ss_pred CCCEEEEECCCCCCHHHHHHHHHCCCC---CCCCEEEE
T ss_conf 997999999999859999999967888---88038984
No 244
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=88.67 E-value=0.23 Score=21.09 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=21.7
Q ss_pred HHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9987199739999918999488999999999
Q 000701 167 NALTNANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 167 ~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
+.+...+.--|.++|.+|+|||+|..++.+.
T Consensus 5 ~~~~~~k~~kIvlvG~~~vGKTSli~rl~~~ 35 (173)
T d1e0sa_ 5 SKIFGNKEMRILMLGLDAAGKTTILYKLKLG 35 (173)
T ss_dssp HHHHTTCCEEEEEEEETTSSHHHHHHHTTCC
T ss_pred HHHHCCCEEEEEEECCCCCCHHHHHHHHHCC
T ss_conf 4540797479999999998789999998448
No 245
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=88.54 E-value=0.21 Score=21.38 Aligned_cols=39 Identities=18% Similarity=0.166 Sum_probs=22.3
Q ss_pred EEEEEECCCCCCHHHH-HHHHHHHHHHCC-CCCEEEEEECC
Q ss_conf 3999991899948899-999999984228-99889999928
Q 000701 175 GIIGVYGMGGIGKTTL-VKAVARQAKERK-LFDQVVFSEVS 213 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtL-a~~~~~~~~~~~-~f~~~~wv~~~ 213 (1344)
+.+.|.|.+|.||||. +..+.+-.+... .-..+..++.+
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~t 55 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFT 55 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESS
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHEEEEECC
T ss_conf 99899962884389999999999999569995578999686
No 246
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=88.49 E-value=0.22 Score=21.28 Aligned_cols=28 Identities=21% Similarity=0.159 Sum_probs=22.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9739999918999488999999999842
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
+.|-|+|+|-+|.|||||+..+......
T Consensus 5 ~iRni~i~gh~~~GKTtL~e~ll~~~g~ 32 (276)
T d2bv3a2 5 RLRNIGIAAHIDAGKTTTTERILYYTGR 32 (276)
T ss_dssp GEEEEEEEECTTSCHHHHHHHHHHHHTS
T ss_pred HCEEEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf 2029999958989989999999996485
No 247
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.00 E-value=0.079 Score=23.99 Aligned_cols=23 Identities=39% Similarity=0.475 Sum_probs=19.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|.++|..|+|||+|..++.+..
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~~ 27 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTGE 27 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC---
T ss_pred EEEEECCCCCCHHHHHHHHHHCC
T ss_conf 99999999908899999998498
No 248
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=87.93 E-value=0.17 Score=21.88 Aligned_cols=24 Identities=33% Similarity=0.607 Sum_probs=21.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.+.|+|+|..|+|||||...+.+.
T Consensus 5 ~~~I~iiG~~nvGKSSLin~L~~~ 28 (179)
T d1egaa1 5 CGFIAIVGRPNVGKSTLLNKLLGQ 28 (179)
T ss_dssp EEEEEEECSSSSSHHHHHHHHHTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 619999979999899999999589
No 249
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=87.91 E-value=0.14 Score=22.52 Aligned_cols=26 Identities=31% Similarity=0.193 Sum_probs=22.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 39999918999488999999999842
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
-.|+|-|.-|+||||+++.+.+....
T Consensus 6 lrI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 6 LRIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 69999888778899999999998734
No 250
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=87.47 E-value=0.12 Score=22.77 Aligned_cols=24 Identities=29% Similarity=0.389 Sum_probs=19.1
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 973999991899948899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
+.--|.++|..|+|||||..++..
T Consensus 16 k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 16 KELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp SCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CEEEEEEECCCCCCHHHHHHHHHC
T ss_conf 668999999999988999988733
No 251
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=87.44 E-value=0.13 Score=22.74 Aligned_cols=21 Identities=33% Similarity=0.612 Sum_probs=18.5
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999991899948899999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
-|+|+|..|+|||||...+..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHHC
T ss_conf 899989999989999999968
No 252
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=87.15 E-value=0.34 Score=20.03 Aligned_cols=24 Identities=33% Similarity=0.362 Sum_probs=19.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+-|.|.|..|.||||+.+.+....
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i 190 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFI 190 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGS
T ss_pred CCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 888999403566257899986530
No 253
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.08 E-value=0.11 Score=23.04 Aligned_cols=21 Identities=24% Similarity=0.433 Sum_probs=18.3
Q ss_pred EEEECCCCCCHHHHHHHHHHH
Q ss_conf 999918999488999999999
Q 000701 177 IGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 177 i~I~G~~G~GKTtLa~~~~~~ 197 (1344)
|.++|.+|+|||+|...+...
T Consensus 9 i~vvG~~~vGKTsLi~~l~~~ 29 (173)
T d2fu5c1 9 LLLIGDSGVGKTCVLFRFSED 29 (173)
T ss_dssp EEEECCCCC------------
T ss_pred EEEECCCCCCHHHHHHHHHHC
T ss_conf 999999994999999999709
No 254
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=86.98 E-value=0.15 Score=22.20 Aligned_cols=22 Identities=32% Similarity=0.626 Sum_probs=18.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHH
Q ss_conf 3999991899948899999999
Q 000701 175 GIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
.-|+|+|.+++|||||...+..
T Consensus 2 ~~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 2 ADVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CCEEEESSTTSSHHHHHHHSEE
T ss_pred CEEEEECCCCCCHHHHHHHHHC
T ss_conf 8699989999879999999968
No 255
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=86.90 E-value=0.16 Score=22.12 Aligned_cols=24 Identities=33% Similarity=0.522 Sum_probs=21.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 973999991899948899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
...+++|+|+-|.|||||.+.+..
T Consensus 24 ~Gei~~iiG~nGaGKSTLl~~l~G 47 (231)
T d1l7vc_ 24 AGEILHLVGPNGAGKSTLLARMAG 47 (231)
T ss_dssp TTCEEECBCCTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 898999998999809999999948
No 256
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=86.72 E-value=0.17 Score=21.92 Aligned_cols=26 Identities=23% Similarity=0.225 Sum_probs=21.7
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
...|+|-|.-|+||||+++.+.+...
T Consensus 4 ~lrI~IEG~iGsGKTTl~~~La~~l~ 29 (329)
T d1e2ka_ 4 LLRVYIDGPHGMGKTTTTQLLVALGS 29 (329)
T ss_dssp EEEEEECSCTTSSHHHHHHHHTC---
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 42999989867789999999999817
No 257
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=86.53 E-value=0.44 Score=19.32 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=30.9
Q ss_pred HHHHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 89999999987-19973999991899948899999999984
Q 000701 160 STLRDIRNALT-NANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 160 ~~~~~l~~~l~-~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.-+..+..+|. .++...+.++|+++.|||++|..+.+-..
T Consensus 38 ~Fl~~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~ 78 (205)
T d1tuea_ 38 TFLGALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFIQ 78 (205)
T ss_dssp HHHHHHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 99999999973898731899988998568999999999828
No 258
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=86.42 E-value=0.33 Score=20.15 Aligned_cols=26 Identities=31% Similarity=0.446 Sum_probs=21.0
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 73999991899948899999999984
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
.|-|+|+|..|.|||||+..+.....
T Consensus 2 iRNv~iiGh~~~GKTtL~e~ll~~~g 27 (267)
T d2dy1a2 2 IRTVALVGHAGSGKTTLTEALLYKTG 27 (267)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 50999994889809999999999709
No 259
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=86.24 E-value=0.5 Score=19.01 Aligned_cols=42 Identities=26% Similarity=0.256 Sum_probs=30.4
Q ss_pred CHH-HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 209-8999999998719973999991899948899999999984
Q 000701 157 SRF-STLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 157 gR~-~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
|.. ...+.+.++ .....+.|.|.|+.|.||||....+.....
T Consensus 141 G~~~~~~~~l~~l-~~~~~GliLvtGpTGSGKSTTl~~~l~~~~ 183 (401)
T d1p9ra_ 141 GMTAHNHDNFRRL-IKRPHGIILVTGPTGSGKSTTLYAGLQELN 183 (401)
T ss_dssp CCCHHHHHHHHHH-HTSSSEEEEEECSTTSCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHH-HHHHHCEEEEECCCCCCCCHHHHHHHHHHC
T ss_conf 1357778999999-864105489876787774477999866625
No 260
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=85.79 E-value=0.27 Score=20.67 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+|+|..|+|||||...+...
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~~ 23 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTGK 23 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999998899999999689
No 261
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=85.67 E-value=0.29 Score=20.48 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=18.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+++|..|+|||||...+...
T Consensus 3 kI~lvG~~nvGKSsLin~l~~~ 24 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAGR 24 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999899999899999999688
No 262
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=85.61 E-value=0.33 Score=20.15 Aligned_cols=24 Identities=17% Similarity=0.252 Sum_probs=20.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
.+-|.|.|..|+||||+|..+..+
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT
T ss_pred CEEEEEEECCCCCHHHHHHHHHHC
T ss_conf 999999808999989999999985
No 263
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=85.58 E-value=0.19 Score=21.56 Aligned_cols=25 Identities=12% Similarity=0.234 Sum_probs=20.7
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 9973999991899948899999999
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
+....|+|+|..++|||||...+..
T Consensus 14 ~~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 14 DTGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp SCSEEEEEEECTTSSHHHHHTTTCC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 6697899988999989999999858
No 264
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=84.81 E-value=0.34 Score=20.05 Aligned_cols=22 Identities=27% Similarity=0.533 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+|+|..|+|||||...+...
T Consensus 10 kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 8999999999999999999778
No 265
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=84.52 E-value=0.46 Score=19.21 Aligned_cols=27 Identities=33% Similarity=0.412 Sum_probs=22.4
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+.++|+|+|-.+.|||||+..+.....
T Consensus 4 r~p~IaIiGh~d~GKSTL~~~L~~~~~ 30 (227)
T d1g7sa4 4 RSPIVSVLGHVDHGKTTLLDHIRGSAV 30 (227)
T ss_dssp CCCEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 998799996998549999999982366
No 266
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.43 E-value=0.55 Score=18.72 Aligned_cols=27 Identities=19% Similarity=0.347 Sum_probs=23.4
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 199739999918999488999999999
Q 000701 171 NANAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
+..+.||+|+|+.+.||++|+-.+...
T Consensus 29 ~~~v~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 29 TQPMVVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp CSBEEEEEEEEBTTSSHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHCCC
T ss_conf 998799998899999799999998099
No 267
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=83.57 E-value=0.38 Score=19.76 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=20.7
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9739999918999488999999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
...-|.|.|..|+||||+|......
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHC
T ss_conf 9999999808999999999999984
No 268
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=83.11 E-value=0.42 Score=19.49 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=20.1
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 739999918999488999999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..-|.|.|+.|+||||+|..+..+
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHC
T ss_conf 999999818999989999999985
No 269
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=82.87 E-value=0.7 Score=18.08 Aligned_cols=38 Identities=29% Similarity=0.489 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHCC--CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8999999998719--9739999918999488999999999
Q 000701 160 STLRDIRNALTNA--NAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 160 ~~~~~l~~~l~~~--~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..+.++...+... ..--|+++|..|+||||+...+..+
T Consensus 16 ~~l~e~~~~l~~~~~~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 16 TKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHCC
T ss_conf 9999999998645778748999899998699999998589
No 270
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=82.29 E-value=0.67 Score=18.19 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=21.3
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+.++.+|+|.-|.||||+...++...
T Consensus 22 ~~~ln~IvG~NGsGKStiL~Ai~~~l 47 (292)
T g1f2t.1 22 KEGINLIIGQNGSGKSSLLDAILVGL 47 (292)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89859999889988999999999985
No 271
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.01 E-value=0.82 Score=17.66 Aligned_cols=36 Identities=22% Similarity=0.320 Sum_probs=26.6
Q ss_pred HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 99999998719973999991899948899999999984
Q 000701 162 LRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 162 ~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
+..+++. ..+.|=|+|+|-.|.|||||+..+.....
T Consensus 7 ~~~lm~~--~~~IRNI~iiGhvd~GKTTL~d~Ll~~~g 42 (341)
T d1n0ua2 7 MRSLMDK--VTNVRNMSVIAHVDHGKSTLTDSLVQRAG 42 (341)
T ss_dssp HHHHHHC--GGGEEEEEEECCGGGTHHHHHHHHHHHHB
T ss_pred HHHHHCC--CCCCCEEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 9998437--31674899996888869999999999779
No 272
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=79.89 E-value=0.89 Score=17.43 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=21.6
Q ss_pred EEEEEECCCCCCHHHHHH-HHHHHHHHCC-CCCEEEEEEC
Q ss_conf 399999189994889999-9999984228-9988999992
Q 000701 175 GIIGVYGMGGIGKTTLVK-AVARQAKERK-LFDQVVFSEV 212 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~-~~~~~~~~~~-~f~~~~wv~~ 212 (1344)
+-+.|+|.+|.||||.+. .+.+-..... ..+.++.++.
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltf 64 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITF 64 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEES
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 9989998186589999999999999809989330999944
No 273
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.84 E-value=0.96 Score=17.22 Aligned_cols=24 Identities=21% Similarity=0.372 Sum_probs=18.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 973999991899948899999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
..--|+|+|..|+|||||...+..
T Consensus 55 ~~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 55 SVLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
T ss_conf 771799989999978999999958
No 274
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=77.67 E-value=0.24 Score=21.04 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=19.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+++|.+|+|||||...+....
T Consensus 2 kI~liG~~n~GKSSLin~l~g~~ 24 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNED 24 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHCCC
T ss_conf 89999999999999999995899
No 275
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=77.23 E-value=1.1 Score=16.93 Aligned_cols=38 Identities=21% Similarity=0.230 Sum_probs=28.7
Q ss_pred HHHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999999987--1997399999189994889999999998
Q 000701 161 TLRDIRNALT--NANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 161 ~~~~l~~~l~--~~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
....+..+|. .+....+.++|+|+.|||+++..+.+-.
T Consensus 89 f~~~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l 128 (267)
T d1u0ja_ 89 AASVFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9999999975999761799998589887789999999983
No 276
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=76.88 E-value=1.1 Score=16.87 Aligned_cols=163 Identities=15% Similarity=0.163 Sum_probs=76.8
Q ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHH--HC-----------CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 9973999991899948899999999984--22-----------8998899999289999999999999995354453317
Q 000701 172 ANAGIIGVYGMGGIGKTTLVKAVARQAK--ER-----------KLFDQVVFSEVSQTPNIKDIQKEIAEKLGLILHEETV 238 (1344)
Q Consensus 172 ~~~~vi~I~G~~G~GKTtLa~~~~~~~~--~~-----------~~f~~~~wv~~~~~~~~~~~~~~i~~~l~~~~~~~~~ 238 (1344)
++.+++.|+|+=..||||+.+.++-..- .- ..||.+ +.......++..-..... .+
T Consensus 39 ~~~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I-~~~~~~~d~~~~~~S~F~----------~E 107 (234)
T d1wb9a2 39 PQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRI-FTRVGAADDLASGRSTFM----------VE 107 (234)
T ss_dssp SSSCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEE-EEEEC-----------CH----------HH
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCEECCCCHHH-EEEECCCCCCCCCHHHHH----------HH
T ss_conf 9953999954673136899998799999987297674176661344202-348746753436531899----------99
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCC----C---CCCCCCCCCCCCCEEEEEEECCHHHHHHH---CCCCCEECCCC
Q ss_conf 99999999999839819999929998532----0---11267678999823899982586788730---99994984699
Q 000701 239 SRRASRLYERLKEEKKILVVLDNLWKCLN----L---ETVGIPYGDDHKGCKILLTSRDRSVLLKM---GSAPPFLIGVL 308 (1344)
Q Consensus 239 ~~~~~~l~~~l~~~~~~LlVlDdv~~~~~----~---~~l~~~l~~~~~~~~iivTtR~~~v~~~~---~~~~~~~l~~l 308 (1344)
......+.+. ..++.|+++|.+-.... . ..+...+. ...++.+++||....+.... .....+.++..
T Consensus 108 ~~~~~~il~~--~~~~sLvliDE~~~gT~~~eg~~l~~a~l~~l~-~~~~~~~i~tTH~~~l~~~~~~~~~v~~~~~~~~ 184 (234)
T d1wb9a2 108 MTETANILHN--ATEYSLVLMDEIGRGTSTYDGLSLAWACAENLA-NKIKALTLFATHYFELTQLPEKMEGVANVHLDAL 184 (234)
T ss_dssp HHHHHHHHHH--CCTTEEEEEESCCCCSSSSHHHHHHHHHHHHHH-HTTCCEEEEECSCGGGGGHHHHSTTEEEEEEEEE
T ss_pred HHHHHHHHHH--CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEEECCHHHHHHHHHCCCCEEEEEEEEE
T ss_conf 9999999974--546608853222358774566678987645432-0454428985246877643312455478998876
Q ss_pred CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 999999999998199988830399999999992998599999999
Q 000701 309 NEEEAWRLFKMTAGDDVEHRELNSTARNVAMACGGLPIALTTIAR 353 (1344)
Q Consensus 309 ~~~e~~~lf~~~~~~~~~~~~~~~~~~~i~~~~~glPlai~~~~~ 353 (1344)
.+++... |..+..+.... ...|-++++.+| +|-.+..-|.
T Consensus 185 ~~~~~i~-f~YkL~~G~~~---~s~ai~iA~~~G-lp~~ii~~A~ 224 (234)
T d1wb9a2 185 EHGDTIA-FMHSVQDGAAS---KSYGLAVAALAG-VPKEVIKRAR 224 (234)
T ss_dssp EETTEEE-EEEEEEESCCS---SCCHHHHHHHTT-CCHHHHHHHH
T ss_pred ECCCCCE-EEEEECCCCCC---CCHHHHHHHHHC-CCHHHHHHHH
T ss_conf 0368401-78774679999---729999999919-6999999999
No 277
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=74.38 E-value=1.1 Score=16.90 Aligned_cols=21 Identities=38% Similarity=0.594 Sum_probs=18.8
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999991899948899999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
-|+|+|....|||||...+..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 999990778709999999997
No 278
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=74.10 E-value=0.46 Score=19.24 Aligned_cols=24 Identities=25% Similarity=0.468 Sum_probs=19.2
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+...++|..|+|||||...+..+.
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC--
T ss_pred CEEEEECCCCCCHHHHHHHHCCHH
T ss_conf 649998778734878987515176
No 279
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=68.45 E-value=1.7 Score=15.63 Aligned_cols=26 Identities=27% Similarity=0.332 Sum_probs=20.7
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 39999918999488999999999842
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
+-+.|+|..|.|||++++.+......
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~ 76 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLL 76 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 65899907999689999999999984
No 280
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=68.21 E-value=1.7 Score=15.60 Aligned_cols=28 Identities=25% Similarity=0.156 Sum_probs=20.1
Q ss_pred CCCCEEEEEECCCCCCHH-HHHHHHHHHH
Q ss_conf 199739999918999488-9999999998
Q 000701 171 NANAGIIGVYGMGGIGKT-TLVKAVARQA 198 (1344)
Q Consensus 171 ~~~~~vi~I~G~~G~GKT-tLa~~~~~~~ 198 (1344)
.+-.+++.|.+.+|.||| +|+..+.+-.
T Consensus 13 ~p~~g~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 13 LPLQGERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CCCSSCEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 89999968997184488999999999998
No 281
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=67.92 E-value=1.7 Score=15.73 Aligned_cols=22 Identities=32% Similarity=0.647 Sum_probs=19.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+|+|.+-+|||||-..+-..
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~ 25 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKA 25 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHCC
T ss_conf 4888899999889999999779
No 282
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=67.07 E-value=1.8 Score=15.46 Aligned_cols=25 Identities=24% Similarity=0.407 Sum_probs=20.5
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 7399999189994889999999998
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.++.+|+|+=|+|||++...+.--.
T Consensus 26 ~~lnvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 26 KGFTAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp SSEEEEEECTTSSSHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9859999999988999999999997
No 283
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=67.02 E-value=1.8 Score=15.45 Aligned_cols=25 Identities=36% Similarity=0.375 Sum_probs=20.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999918999488999999999842
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
-|+|+|-.+.|||||+.++.+....
T Consensus 5 ni~iiGhvd~GKSTL~~~Ll~~~g~ 29 (204)
T d2c78a3 5 NVGTIGHVDHGKTTLTAALTYVAAA 29 (204)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9999947898499999999998523
No 284
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=62.91 E-value=2.2 Score=14.97 Aligned_cols=51 Identities=14% Similarity=0.034 Sum_probs=30.8
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 973999991899948899999999984228998899999289999999999999995
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
..++..|+++-|.|||+++..++.. ....+.+.+....-..+..+.+.+.+
T Consensus 7 ~~~~~ll~apTGsGKT~~~~~~~~~------~~~~vli~~P~~~l~~q~~~~~~~~~ 57 (136)
T d1a1va1 7 SFQVAHLHAPTGSGKSTKVPAAYAA------QGYKVLVLNPSVAATLGFGAYMSKAH 57 (136)
T ss_dssp SCEEEEEECCTTSCTTTHHHHHHHT------TTCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHH------CCCCEEEECCHHHHHHHHHHHHHHHH
T ss_conf 7888999968877999999999998------69939997676999999999999985
No 285
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=61.95 E-value=2.3 Score=14.86 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=20.9
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 97399999189994889999999998
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
..++..|+|+=|.|||++...++.-.
T Consensus 22 ~~~~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 22 KEGINLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp CSEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 99819999789999999999999997
No 286
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=61.32 E-value=2.4 Score=14.79 Aligned_cols=24 Identities=29% Similarity=0.584 Sum_probs=20.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 399999189994889999999998
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
--|+|+|.+.+|||||-..+-...
T Consensus 11 ~kiGivG~Pn~GKSTlfnalT~~~ 34 (296)
T d1ni3a1 11 LKTGIVGMPNVGKSTFFRAITKSV 34 (296)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHST
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC
T ss_conf 379997899998999999997789
No 287
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=60.72 E-value=2.4 Score=14.72 Aligned_cols=37 Identities=24% Similarity=0.276 Sum_probs=29.0
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999987199739999918999488999999999842
Q 000701 164 DIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 164 ~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
....++.......|.|.|..|.|||.-++.+.+....
T Consensus 115 Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il~yL~~ 151 (712)
T d1d0xa2 115 AYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLAS 151 (712)
T ss_dssp HHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999997389916999679988889999999999998
No 288
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=59.98 E-value=2.5 Score=14.64 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=28.9
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999987199739999918999488999999999842
Q 000701 164 DIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 164 ~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
....+........|.|.|..|.|||+-++.+.+....
T Consensus 76 Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~yL~~ 112 (684)
T d1lkxa_ 76 AYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTF 112 (684)
T ss_dssp HHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9999997089818999738989989999999999999
No 289
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=59.77 E-value=2.5 Score=14.62 Aligned_cols=23 Identities=35% Similarity=0.471 Sum_probs=19.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99999189994889999999998
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
-|+|+|.+-+|||||-..+-...
T Consensus 2 ~v~lvG~pn~GKStlfn~lt~~~ 24 (319)
T d1wxqa1 2 EIGVVGKPNVGKSTFFSAATLVD 24 (319)
T ss_dssp EEEEEECTTSSHHHHHHHHHC--
T ss_pred CEEEECCCCCCHHHHHHHHHCCC
T ss_conf 17688999998999999997889
No 290
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=58.11 E-value=2.7 Score=14.44 Aligned_cols=37 Identities=27% Similarity=0.242 Sum_probs=29.1
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999987199739999918999488999999999842
Q 000701 164 DIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 164 ~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
....++.......|.|.|..|.|||+-++.+.+....
T Consensus 81 Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~yL~~ 117 (710)
T d1br2a2 81 AYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAV 117 (710)
T ss_dssp HHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9999998389917999718988889999999999998
No 291
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=58.07 E-value=2.7 Score=14.44 Aligned_cols=19 Identities=37% Similarity=0.676 Sum_probs=16.1
Q ss_pred CEEEEEECCCCCCHHHHHH
Q ss_conf 7399999189994889999
Q 000701 174 AGIIGVYGMGGIGKTTLVK 192 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~ 192 (1344)
..+..+.|..|.|||||..
T Consensus 14 ~~~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 14 GDVAVFFGLSGTGKTTLST 32 (313)
T ss_dssp SCEEEEECSTTSSHHHHHC
T ss_pred CCEEEEECCCCCCCCCCEE
T ss_conf 9889997047798560232
No 292
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=55.60 E-value=2.9 Score=14.19 Aligned_cols=20 Identities=35% Similarity=0.637 Sum_probs=16.7
Q ss_pred CEEEEEECCCCCCHHHHHHH
Q ss_conf 73999991899948899999
Q 000701 174 AGIIGVYGMGGIGKTTLVKA 193 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~ 193 (1344)
..+....|..|.|||||...
T Consensus 14 ~~valffGLSGTGKTTLs~~ 33 (318)
T d1j3ba1 14 GDVAVFFGLSGTGKTTLSTD 33 (318)
T ss_dssp CCEEEEEECTTSCHHHHTCB
T ss_pred CCEEEEECCCCCCCCCCCCC
T ss_conf 98899973687981422107
No 293
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=55.15 E-value=3 Score=14.14 Aligned_cols=38 Identities=24% Similarity=0.220 Sum_probs=29.5
Q ss_pred HHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999987199739999918999488999999999842
Q 000701 163 RDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 163 ~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
.....++..+....|.|.|..|.|||.-++.+.+....
T Consensus 110 ~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~~ 147 (789)
T d1kk8a2 110 NAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAK 147 (789)
T ss_dssp HHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 99999997189947999708999879999999999998
No 294
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=53.94 E-value=3.1 Score=14.02 Aligned_cols=46 Identities=24% Similarity=0.109 Sum_probs=31.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 562120989999999987199739999918999488999999999842
Q 000701 153 EAFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 153 ~~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
++++.-. -.....++.......|.|.|..|.|||.-++.+.+....
T Consensus 104 PHifaiA--~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~ 149 (794)
T d2mysa2 104 PHIFSIS--DNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFAT 149 (794)
T ss_dssp SCHHHHH--HHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHH--HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8089999--999999987499807999717988789999999999998
No 295
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=50.60 E-value=3.5 Score=13.69 Aligned_cols=69 Identities=19% Similarity=0.103 Sum_probs=43.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 209899999999871997399999189994889999999998422899889999928999999999999999
Q 000701 157 SRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEK 228 (1344)
Q Consensus 157 gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~ 228 (1344)
......+++.+.+..+......+.|..|.|||.++.......-.. .+ .++ +-++...=..+....+-+.
T Consensus 59 ~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~-g~-qv~-~l~Pt~~La~Q~~~~~~~~ 127 (233)
T d2eyqa3 59 DQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDN-HK-QVA-VLVPTTLLAQQHYDNFRDR 127 (233)
T ss_dssp HHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTT-TC-EEE-EECSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CC-CEE-EECCHHHHHHHHHHHHHHH
T ss_conf 488899999999854576670898388877289999999999976-89-569-9746887679999999998
No 296
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=49.87 E-value=3.6 Score=13.62 Aligned_cols=18 Identities=39% Similarity=0.698 Sum_probs=15.6
Q ss_pred EEEEEECCCCCCHHHHHH
Q ss_conf 399999189994889999
Q 000701 175 GIIGVYGMGGIGKTTLVK 192 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~ 192 (1344)
.+....|..|.|||||..
T Consensus 15 d~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 15 DVTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp CEEEEECCTTSSHHHHHC
T ss_pred CEEEEECCCCCCCCCCEE
T ss_conf 879997367788120512
No 297
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=48.01 E-value=3.9 Score=13.43 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=28.4
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999987199739999918999488999999999842
Q 000701 164 DIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKE 200 (1344)
Q Consensus 164 ~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~ 200 (1344)
....++..+....|.|.|..|.|||.-++.+.+....
T Consensus 84 Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~~l~~ 120 (730)
T d1w7ja2 84 AYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFAT 120 (730)
T ss_dssp HHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9999997089807999717999879999999999999
No 298
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=43.04 E-value=4.6 Score=12.96 Aligned_cols=24 Identities=29% Similarity=0.220 Sum_probs=20.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
-|+|.|-.+.|||||+.++.....
T Consensus 5 Ni~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 5 NLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHB
T ss_pred EEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 899994479999999999999859
No 299
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=42.72 E-value=4.7 Score=12.93 Aligned_cols=39 Identities=13% Similarity=-0.071 Sum_probs=22.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 9739999918999488999999999842289988999992
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEV 212 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~ 212 (1344)
+...+.|.++.|.|||..|....-....+.. ..++.+..
T Consensus 6 ~~~~~il~~~tGsGKT~~~~~~~~~~~~~~~-~~vli~~p 44 (140)
T d1yksa1 6 KGMTTVLDFHPGAGKTRRFLPQILAECARRR-LRTLVLAP 44 (140)
T ss_dssp TTCEEEECCCTTSSTTTTHHHHHHHHHHHTT-CCEEEEES
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-CEEEEEEC
T ss_conf 5996799817998855999999999753138-51565312
No 300
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=41.70 E-value=4.9 Score=12.83 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=20.4
Q ss_pred CEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 7399999189994889999999998
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.++.+|+|+=|.|||++...+..-.
T Consensus 25 ~~l~~i~G~NGsGKS~ileAi~~~l 49 (427)
T d1w1wa_ 25 SNFTSIIGPNGSGKSNMMDAISFVL 49 (427)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9989999999998899999999985
No 301
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=41.29 E-value=2.3 Score=14.89 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=20.5
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
++..|+|+-|.||||+...+..-..
T Consensus 25 ~~tvi~G~NGsGKStil~Ai~~~L~ 49 (222)
T d1qhla_ 25 LVTTLSGGNGAGKSTTMAAFVTALI 49 (222)
T ss_dssp HHHHHHSCCSHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 8089988999987999999999966
No 302
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=40.86 E-value=5 Score=12.75 Aligned_cols=22 Identities=36% Similarity=0.477 Sum_probs=18.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999918999488999999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
-|+|.|-.+.|||||+..+.+.
T Consensus 5 ni~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 5 NVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp EEEEESSTTSSHHHHHHHHHHH
T ss_pred EEEEEECCCCCHHHHHHHHHHH
T ss_conf 8999958898099999999999
No 303
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.79 E-value=5.2 Score=12.64 Aligned_cols=36 Identities=11% Similarity=-0.011 Sum_probs=21.4
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
Q ss_conf 39999918999488999999999842289988999992
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEV 212 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~ 212 (1344)
+-+.+.++.|.|||+.|....-....+ ...++++.-
T Consensus 41 ~~~il~apTGsGKT~~a~l~i~~~~~~--~~~vl~l~P 76 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAEMAMVREAIK--GGKSLYVVP 76 (202)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHHHHHT--TCCEEEEES
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHC--CCCCEEECC
T ss_conf 998998689985117899999987622--576033166
No 304
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=38.75 E-value=5.4 Score=12.54 Aligned_cols=25 Identities=24% Similarity=0.166 Sum_probs=21.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
--|+++|-...|||||+.++.....
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 5599993789898999999999869
No 305
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=36.47 E-value=5.9 Score=12.32 Aligned_cols=23 Identities=22% Similarity=0.505 Sum_probs=18.9
Q ss_pred CEEEEEECCCCCCHHHHHHHHHH
Q ss_conf 73999991899948899999999
Q 000701 174 AGIIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 174 ~~vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
.++.+|+|+=|.|||++...+.-
T Consensus 24 ~~lnvlvG~NgsGKS~iL~Ai~~ 46 (308)
T d1e69a_ 24 DRVTAIVGPNGSGKSNIIDAIKW 46 (308)
T ss_dssp SSEEEEECCTTTCSTHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 98199999999848999999999
No 306
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=36.16 E-value=5.9 Score=12.29 Aligned_cols=26 Identities=23% Similarity=0.190 Sum_probs=20.9
Q ss_pred CCEE-EEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9739-9999189994889999999998
Q 000701 173 NAGI-IGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 173 ~~~v-i~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
+..+ |+|.|-.+.|||||+.++....
T Consensus 22 k~~iNi~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 22 KEHVNIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp CEEEEEEEEECGGGTHHHHHHHHHHHT
T ss_pred CCCEEEEEEEECCCCHHHHHHHHHHHC
T ss_conf 982499999527989999999999984
No 307
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=31.86 E-value=7 Score=11.85 Aligned_cols=21 Identities=48% Similarity=0.540 Sum_probs=17.8
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999991899948899999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
-|+|.|-.+.|||||+..+..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 999993458849999999970
No 308
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=30.86 E-value=7.2 Score=11.75 Aligned_cols=42 Identities=17% Similarity=0.074 Sum_probs=28.6
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 621209899999999871997399999189994889999999998
Q 000701 154 AFESRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQA 198 (1344)
Q Consensus 154 ~~~gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~ 198 (1344)
.+-=|+...+.+..++. +.+ ..|+++.|.|||.+|..+....
T Consensus 68 ~~~Lr~yQ~eav~~~~~--~~~-~ll~~~tG~GKT~~a~~~~~~~ 109 (206)
T d2fz4a1 68 EISLRDYQEKALERWLV--DKR-GCIVLPTGSGKTHVAMAAINEL 109 (206)
T ss_dssp CCCCCHHHHHHHHHHTT--TSE-EEEEESSSTTHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHH--CCC-CEEEECCCCCCEEHHHHHHHHH
T ss_conf 99849999999999996--799-0999578998264377678774
No 309
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=30.79 E-value=7.2 Score=11.74 Aligned_cols=21 Identities=52% Similarity=0.616 Sum_probs=18.4
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q ss_conf 999991899948899999999
Q 000701 176 IIGVYGMGGIGKTTLVKAVAR 196 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~ 196 (1344)
-|+|+|-...|||||+..+..
T Consensus 10 ni~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 10 NIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp EEEEECSTTSSHHHHHHHHHS
T ss_pred EEEEEECCCCCHHHHHHHHHH
T ss_conf 899997248869999999970
No 310
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=30.55 E-value=7.3 Score=11.72 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 098999999998719973999991899948899999999984228998899999289999999999999995
Q 000701 158 RFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNIKDIQKEIAEKL 229 (1344)
Q Consensus 158 R~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~~~~~~~i~~~l 229 (1344)
....++++.+.+..+....-.+.|.-|.|||.+|.......-.. .+...+ + +....=..+....+.+.+
T Consensus 88 Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~-g~q~~~-m-~Pt~~La~Qh~~~~~~~f 156 (264)
T d1gm5a3 88 QKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEA-GFQTAF-M-VPTSILAIQHYRRTVESF 156 (264)
T ss_dssp HHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHH-TSCEEE-E-CSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHC-CCCEEE-E-EEHHHHHHHHHHHHHHHH
T ss_conf 78889999987623675315666353556659999999998851-355058-7-404766578999998862
No 311
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.13 E-value=7.4 Score=11.67 Aligned_cols=24 Identities=21% Similarity=0.151 Sum_probs=20.8
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999991899948899999999984
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
-|+|.|-.+.|||||+.++.....
T Consensus 8 Ni~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 8 NVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHS
T ss_pred EEEEEECCCCCHHHHHHHHHHHCC
T ss_conf 799994789989999999999818
No 312
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=29.84 E-value=7.5 Score=11.64 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=20.6
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9739999918999488999999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..-.|+|+|++-+||+||+..+...
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCEEEEEEECCCCCHHHHHHHHHCC
T ss_conf 7527899866754435554254266
No 313
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=29.47 E-value=7.6 Score=11.60 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=27.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf 2098999999998719973999991899948899999999984228998899999
Q 000701 157 SRFSTLRDIRNALTNANAGIIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSE 211 (1344)
Q Consensus 157 gR~~~~~~l~~~l~~~~~~vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~ 211 (1344)
-|+-+.+. .+.+.+.+ +.|+++.|.|||..|..+......+.. ..++++.
T Consensus 10 pr~~Q~~~-~~~~~~~n---~lv~~pTGsGKT~i~~~~~~~~~~~~~-~~il~i~ 59 (200)
T d1wp9a1 10 PRIYQEVI-YAKCKETN---CLIVLPTGLGKTLIAMMIAEYRLTKYG-GKVLMLA 59 (200)
T ss_dssp CCHHHHHH-HHHGGGSC---EEEECCTTSCHHHHHHHHHHHHHHHSC-SCEEEEC
T ss_pred CCHHHHHH-HHHHHCCC---EEEEECCCCCHHHHHHHHHHHHHHHCC-CCEEEEC
T ss_conf 88999999-99996399---699918997288999999999997069-8189973
No 314
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=25.75 E-value=8.9 Score=11.19 Aligned_cols=25 Identities=12% Similarity=-0.125 Sum_probs=21.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 3999991899948899999999984
Q 000701 175 GIIGVYGMGGIGKTTLVKAVARQAK 199 (1344)
Q Consensus 175 ~vi~I~G~~G~GKTtLa~~~~~~~~ 199 (1344)
=.|.+.|..|.||+|+|+.+....-
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~~l~ 31 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLSTFL 31 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 6999808887788899999999998
No 315
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=25.66 E-value=8.9 Score=11.18 Aligned_cols=37 Identities=27% Similarity=0.199 Sum_probs=27.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
Q ss_conf 9999918999488999999999842289988999992899999
Q 000701 176 IIGVYGMGGIGKTTLVKAVARQAKERKLFDQVVFSEVSQTPNI 218 (1344)
Q Consensus 176 vi~I~G~~G~GKTtLa~~~~~~~~~~~~f~~~~wv~~~~~~~~ 218 (1344)
++.|.|.++.||+..|.+.+. .+..+.|+.-+..+|.
T Consensus 1 iiLVtGGarSGKS~~AE~l~~------~~~~~~YiAT~~~~D~ 37 (180)
T d1c9ka_ 1 MILVTGGARSGKSRHAEALIG------DAPQVLYIATSQILDD 37 (180)
T ss_dssp CEEEEECTTSSHHHHHHHHHC------SCSSEEEEECCCC---
T ss_pred CEEEECCCCCCHHHHHHHHHH------CCCCCEEEECCCCCCH
T ss_conf 989978987659999999984------5898289974678998
No 316
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=25.35 E-value=9 Score=11.14 Aligned_cols=25 Identities=20% Similarity=0.434 Sum_probs=21.2
Q ss_pred CCEEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9739999918999488999999999
Q 000701 173 NAGIIGVYGMGGIGKTTLVKAVARQ 197 (1344)
Q Consensus 173 ~~~vi~I~G~~G~GKTtLa~~~~~~ 197 (1344)
..+-|-+.|.||+|-+.||+.+...
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNE 31 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHH
T ss_pred HCCEEEEEEECHHHHHHHHHHHHHC
T ss_conf 0777999987799999999999848
Done!