Query 000702
Match_columns 1343
No_of_seqs 666 out of 5477
Neff 7.9
Searched_HMMs 46136
Date Mon Apr 1 22:24:01 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000702.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000702hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 5E-261 1E-265 2454.8 143.4 1254 57-1337 122-1379(1381)
2 PLN03130 ABC transporter C fam 100.0 3E-207 6E-212 2079.8 155.6 1251 52-1336 221-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 4E-203 9E-208 2042.6 156.3 1249 51-1336 220-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 7E-200 1E-204 2014.2 156.3 1273 56-1334 200-1521(1522)
5 TIGR01271 CFTR_protein cystic 100.0 4E-195 9E-200 1960.6 151.3 1270 56-1336 2-1455(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-186 5E-191 1874.7 149.1 1256 56-1335 58-1548(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 6E-151 1E-155 1407.1 113.0 1097 202-1334 97-1226(1228)
8 PTZ00265 multidrug resistance 100.0 5E-141 1E-145 1420.6 135.9 1193 130-1333 55-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.2E-93 2.5E-98 848.9 57.7 567 763-1335 136-706 (716)
10 COG2274 SunT ABC-type bacterio 100.0 2.5E-85 5.4E-90 814.4 63.9 549 780-1333 158-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.8E-81 3.9E-86 789.5 64.0 544 783-1335 21-566 (567)
12 PRK11174 cysteine/glutathione 100.0 1E-79 2.2E-84 778.0 65.3 563 765-1335 13-586 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 3.1E-79 6.7E-84 784.0 63.2 542 780-1330 165-711 (711)
14 KOG0058 Peptide exporter, ABC 100.0 2.1E-78 4.5E-83 718.9 63.4 551 125-677 137-705 (716)
15 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.4E-78 3.1E-83 779.0 67.2 544 780-1332 140-684 (686)
16 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.7E-78 8E-83 778.8 65.1 563 762-1330 142-709 (710)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 3.8E-78 8.3E-83 777.7 64.3 561 762-1331 144-707 (708)
18 PRK10790 putative multidrug tr 100.0 9.8E-78 2.1E-82 760.0 66.8 546 781-1334 28-576 (592)
19 PRK11176 lipid transporter ATP 100.0 4.8E-77 1E-81 753.4 66.1 545 784-1335 33-581 (582)
20 PRK11160 cysteine/glutathione 100.0 1.8E-76 3.8E-81 742.6 65.3 544 783-1332 23-573 (574)
21 TIGR03375 type_I_sec_LssB type 100.0 1.3E-76 2.9E-81 761.8 65.2 551 764-1321 137-689 (694)
22 COG4988 CydD ABC-type transpor 100.0 1.5E-76 3.3E-81 692.1 59.1 514 814-1335 38-557 (559)
23 KOG0056 Heavy metal exporter H 100.0 9.5E-79 2.1E-83 676.8 37.9 496 829-1333 272-774 (790)
24 KOG0055 Multidrug/pheromone ex 100.0 3.6E-78 7.8E-83 754.4 46.9 514 814-1333 69-588 (1228)
25 COG2274 SunT ABC-type bacterio 100.0 9.7E-75 2.1E-79 719.7 72.5 548 122-674 141-706 (709)
26 TIGR02203 MsbA_lipidA lipid A 100.0 2.1E-75 4.5E-80 737.7 66.3 546 783-1334 21-569 (571)
27 COG4987 CydC ABC-type transpor 100.0 8.2E-76 1.8E-80 672.5 55.9 499 826-1331 68-571 (573)
28 PRK11174 cysteine/glutathione 100.0 1.8E-74 3.8E-79 730.3 72.4 547 123-676 10-584 (588)
29 TIGR01846 type_I_sec_HlyB type 100.0 4.8E-75 1E-79 746.6 67.0 564 762-1333 127-692 (694)
30 TIGR02868 CydC thiol reductant 100.0 6E-74 1.3E-78 716.5 60.0 506 782-1292 19-529 (529)
31 PRK13657 cyclic beta-1,2-gluca 100.0 3.4E-73 7.4E-78 717.5 67.4 546 779-1333 22-570 (588)
32 TIGR02204 MsbA_rel ABC transpo 100.0 3.8E-73 8.3E-78 717.4 66.4 548 783-1333 25-575 (576)
33 KOG0057 Mitochondrial Fe/S clu 100.0 5.8E-74 1.3E-78 657.3 51.3 513 815-1335 73-588 (591)
34 PRK10789 putative multidrug tr 100.0 1.1E-72 2.3E-77 708.3 62.4 511 818-1334 38-551 (569)
35 TIGR01192 chvA glucan exporter 100.0 5.1E-72 1.1E-76 703.0 67.4 550 781-1339 24-576 (585)
36 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 7.2E-71 1.6E-75 707.8 73.5 542 124-674 125-683 (686)
37 TIGR02857 CydD thiol reductant 100.0 8.8E-72 1.9E-76 697.0 61.1 518 782-1304 9-529 (529)
38 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1E-70 2.2E-75 709.7 72.9 544 124-673 143-709 (710)
39 COG5265 ATM1 ABC-type transpor 100.0 2.7E-73 5.9E-78 630.9 39.7 489 838-1331 4-496 (497)
40 TIGR00958 3a01208 Conjugate Tr 100.0 1.9E-70 4.2E-75 702.8 71.9 542 126-672 152-710 (711)
41 TIGR03375 type_I_sec_LssB type 100.0 3.4E-70 7.5E-75 702.4 72.8 537 123-665 135-689 (694)
42 TIGR01193 bacteriocin_ABC ABC- 100.0 1.7E-69 3.6E-74 697.6 73.2 541 125-673 146-706 (708)
43 PRK11176 lipid transporter ATP 100.0 1.5E-68 3.2E-73 676.0 73.1 546 125-675 15-578 (582)
44 TIGR01842 type_I_sec_PrtD type 100.0 2.9E-69 6.3E-74 675.0 63.3 527 782-1320 12-542 (544)
45 COG1123 ATPase components of v 100.0 1.2E-70 2.6E-75 646.7 45.9 465 451-1333 5-532 (539)
46 PRK10790 putative multidrug tr 100.0 9.5E-68 2.1E-72 669.0 75.1 544 126-677 14-576 (592)
47 TIGR02203 MsbA_lipidA lipid A 100.0 8.2E-68 1.8E-72 668.5 72.8 544 126-674 5-566 (571)
48 PTZ00265 multidrug resistance 100.0 2.6E-69 5.7E-74 726.7 62.7 513 817-1333 98-728 (1466)
49 COG4988 CydD ABC-type transpor 100.0 1.1E-67 2.4E-72 617.7 67.0 529 139-677 4-556 (559)
50 PRK11160 cysteine/glutathione 100.0 2.1E-67 4.5E-72 660.6 71.7 544 126-674 7-572 (574)
51 COG1132 MdlB ABC-type multidru 100.0 3.2E-67 6.9E-72 660.3 72.1 541 126-676 7-564 (567)
52 TIGR02204 MsbA_rel ABC transpo 100.0 5.9E-67 1.3E-71 661.0 72.2 549 124-674 7-573 (576)
53 TIGR01846 type_I_sec_HlyB type 100.0 1E-66 2.3E-71 669.5 74.1 547 123-674 127-690 (694)
54 TIGR02868 CydC thiol reductant 100.0 5.5E-67 1.2E-71 653.7 68.3 507 126-636 4-529 (529)
55 PRK13657 cyclic beta-1,2-gluca 100.0 2.2E-66 4.8E-71 655.4 73.8 541 127-676 11-570 (588)
56 PRK10261 glutathione transport 100.0 4.4E-69 9.4E-74 678.9 46.8 484 450-1332 11-566 (623)
57 PRK10789 putative multidrug tr 100.0 4.5E-66 9.8E-71 648.4 70.1 529 144-676 4-550 (569)
58 TIGR01192 chvA glucan exporter 100.0 3.4E-65 7.3E-70 641.3 74.3 543 126-675 10-569 (585)
59 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.2E-66 4.7E-71 648.8 63.0 514 784-1312 26-551 (555)
60 PRK15134 microcin C ABC transp 100.0 2.8E-68 6E-73 663.4 44.9 448 451-1322 5-517 (529)
61 TIGR01842 type_I_sec_PrtD type 100.0 3.5E-65 7.5E-70 638.3 69.6 522 131-664 2-542 (544)
62 PRK13549 xylose transporter AT 100.0 6.1E-68 1.3E-72 656.8 42.8 443 451-1319 5-493 (506)
63 PRK09700 D-allose transporter 100.0 1E-67 2.3E-72 655.9 42.2 437 451-1317 5-495 (510)
64 TIGR03269 met_CoM_red_A2 methy 100.0 2.1E-67 4.6E-72 654.7 42.6 219 1096-1320 279-517 (520)
65 TIGR02857 CydD thiol reductant 100.0 1.5E-64 3.2E-69 631.9 66.7 511 133-648 1-529 (529)
66 PRK10762 D-ribose transporter 100.0 5.1E-67 1.1E-71 647.8 41.9 436 451-1319 4-483 (501)
67 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-66 2.3E-71 645.1 44.6 447 451-1321 11-493 (510)
68 TIGR00956 3a01205 Pleiotropic 100.0 3.5E-65 7.6E-70 686.9 62.4 251 1053-1317 715-990 (1394)
69 PRK15064 ABC transporter ATP-b 100.0 8.7E-66 1.9E-70 641.1 49.6 201 1095-1321 318-526 (530)
70 COG4987 CydC ABC-type transpor 100.0 9.8E-64 2.1E-68 573.2 62.0 544 124-673 6-570 (573)
71 TIGR02633 xylG D-xylose ABC tr 100.0 2.3E-66 5E-71 642.9 42.2 213 1096-1318 257-490 (500)
72 PRK11288 araG L-arabinose tran 100.0 2.2E-66 4.9E-71 642.0 41.8 435 451-1319 4-484 (501)
73 KOG0057 Mitochondrial Fe/S clu 100.0 6.1E-64 1.3E-68 574.9 57.0 530 138-675 33-585 (591)
74 TIGR00957 MRP_assoc_pro multi 100.0 3.7E-63 7.9E-68 675.4 73.5 549 123-675 952-1519(1522)
75 PRK10982 galactose/methyl gala 100.0 1.8E-65 4E-70 632.9 42.0 436 455-1319 2-479 (491)
76 PRK10938 putative molybdenum t 100.0 2.3E-65 4.9E-70 632.4 42.5 439 451-1313 3-485 (490)
77 TIGR01257 rim_protein retinal- 100.0 2.8E-62 6.1E-67 653.0 73.1 216 1094-1321 1935-2160(2272)
78 PRK11819 putative ABC transpor 100.0 5.6E-64 1.2E-68 626.6 52.0 203 1095-1322 323-535 (556)
79 COG4172 ABC-type uncharacteriz 100.0 9.4E-65 2E-69 557.9 39.4 457 451-1331 6-528 (534)
80 PLN03232 ABC transporter C fam 100.0 4E-63 8.7E-68 674.0 64.5 474 841-1334 366-841 (1495)
81 PLN03130 ABC transporter C fam 100.0 4.4E-62 9.6E-67 662.8 73.3 549 123-677 901-1475(1622)
82 PRK10522 multidrug transporter 100.0 2.1E-62 4.6E-67 613.0 61.4 472 829-1319 61-538 (547)
83 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.4E-63 3.1E-68 623.0 50.7 480 451-1321 4-532 (552)
84 KOG0056 Heavy metal exporter H 100.0 2.1E-64 4.6E-69 562.2 33.7 539 133-677 213-775 (790)
85 PTZ00243 ABC transporter; Prov 100.0 8.7E-61 1.9E-65 649.7 72.5 471 204-676 1026-1546(1560)
86 PRK10636 putative ABC transpor 100.0 1.3E-62 2.9E-67 620.1 50.4 200 1095-1320 311-517 (638)
87 COG4618 ArpD ABC-type protease 100.0 2.9E-61 6.2E-66 546.9 46.9 489 823-1321 70-561 (580)
88 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.1E-59 4.5E-64 585.9 65.2 515 126-656 8-551 (555)
89 COG4618 ArpD ABC-type protease 100.0 8.5E-60 1.8E-64 534.9 54.8 529 122-665 10-561 (580)
90 PRK11147 ABC transporter ATPas 100.0 3.9E-61 8.4E-66 608.8 48.0 200 1096-1320 319-528 (635)
91 COG0488 Uup ATPase components 100.0 5.9E-60 1.3E-64 570.0 45.6 485 451-1321 3-526 (530)
92 TIGR01271 CFTR_protein cystic 100.0 8.6E-58 1.9E-62 620.7 71.6 470 200-677 949-1453(1490)
93 PLN03140 ABC transporter G fam 100.0 4.2E-58 9.1E-63 614.8 67.4 212 1096-1317 867-1107(1470)
94 PLN03073 ABC transporter F fam 100.0 4.5E-60 9.8E-65 597.2 45.6 200 1094-1318 506-712 (718)
95 PRK10522 multidrug transporter 100.0 1.9E-56 4.1E-61 559.4 65.4 513 125-661 3-536 (547)
96 PRK13409 putative ATPase RIL; 100.0 7.3E-59 1.6E-63 577.0 37.6 191 1096-1314 340-536 (590)
97 TIGR00954 3a01203 Peroxysomal 100.0 4.2E-57 9E-62 572.2 52.4 511 778-1306 98-653 (659)
98 COG1129 MglA ABC-type sugar tr 100.0 1.4E-57 3.1E-62 533.1 37.7 443 451-1317 8-487 (500)
99 COG5265 ATM1 ABC-type transpor 100.0 9.3E-57 2E-61 499.3 40.5 466 203-673 9-495 (497)
100 KOG0054 Multidrug resistance-a 100.0 3E-54 6.5E-59 553.6 62.2 469 200-673 882-1372(1381)
101 TIGR00954 3a01203 Peroxysomal 100.0 4.8E-54 1E-58 544.3 60.0 517 126-650 82-653 (659)
102 COG3845 ABC-type uncharacteriz 100.0 2.3E-54 4.9E-59 493.5 38.1 439 451-1317 4-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.4E-54 3.1E-59 490.8 26.0 238 1095-1334 1-238 (275)
104 PRK14257 phosphate ABC transpo 100.0 1.7E-50 3.7E-55 469.2 24.7 258 1060-1324 35-317 (329)
105 KOG0927 Predicted transporter 100.0 6.4E-48 1.4E-52 440.6 25.9 193 1096-1312 389-587 (614)
106 COG1126 GlnQ ABC-type polar am 100.0 2.3E-47 5E-52 393.0 20.3 222 1096-1330 2-236 (240)
107 COG1135 AbcC ABC-type metal io 100.0 5.1E-47 1.1E-51 409.8 21.7 226 1097-1333 2-245 (339)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 2.1E-45 4.7E-50 415.7 27.6 240 1093-1332 16-255 (257)
109 COG1117 PstB ABC-type phosphat 100.0 6.4E-46 1.4E-50 379.8 16.8 220 1095-1323 6-240 (253)
110 KOG0062 ATPase component of AB 100.0 2.1E-44 4.6E-49 409.8 29.2 193 1094-1312 360-560 (582)
111 cd03252 ABCC_Hemolysin The ABC 100.0 3.2E-44 7E-49 402.0 25.8 234 1097-1331 1-235 (237)
112 COG1125 OpuBA ABC-type proline 100.0 5.5E-45 1.2E-49 381.8 18.2 217 1097-1326 2-231 (309)
113 PRK14257 phosphate ABC transpo 100.0 2.7E-44 5.9E-49 417.4 23.8 263 385-665 23-314 (329)
114 cd03244 ABCC_MRP_domain2 Domai 100.0 5.4E-44 1.2E-48 395.9 25.0 221 1095-1315 1-221 (221)
115 COG1126 GlnQ ABC-type polar am 100.0 1.4E-43 3.1E-48 365.1 19.4 201 451-665 2-226 (240)
116 cd03251 ABCC_MsbA MsbA is an e 100.0 7.8E-43 1.7E-47 390.1 25.2 232 1097-1329 1-233 (234)
117 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.1E-42 2.4E-47 381.2 24.7 207 1091-1315 1-207 (207)
118 TIGR02314 ABC_MetN D-methionin 100.0 8.4E-43 1.8E-47 405.2 23.2 224 1097-1331 2-242 (343)
119 cd03254 ABCC_Glucan_exporter_l 100.0 1.6E-42 3.5E-47 386.2 24.4 226 1095-1321 1-227 (229)
120 COG1120 FepC ABC-type cobalami 100.0 6.8E-43 1.5E-47 380.9 20.7 213 1096-1321 2-229 (258)
121 cd03253 ABCC_ATM1_transporter 100.0 2.7E-42 5.9E-47 386.3 25.9 233 1097-1331 1-234 (236)
122 COG1124 DppF ABC-type dipeptid 100.0 7.3E-43 1.6E-47 367.9 19.9 227 1096-1333 3-245 (252)
123 COG1127 Ttg2A ABC-type transpo 100.0 1.7E-42 3.7E-47 362.6 21.8 226 1095-1333 7-248 (263)
124 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 5.2E-42 1.1E-46 384.4 25.1 233 1097-1330 1-235 (238)
125 cd03245 ABCC_bacteriocin_expor 100.0 6.9E-42 1.5E-46 378.8 24.5 219 1095-1313 1-220 (220)
126 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.4E-42 1.6E-46 387.1 25.1 222 451-675 2-236 (275)
127 COG3839 MalK ABC-type sugar tr 100.0 3.8E-42 8.2E-47 389.1 21.4 216 1096-1326 3-229 (338)
128 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-42 7.9E-47 376.4 20.5 215 1096-1322 3-230 (235)
129 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.7E-42 8.1E-47 372.8 20.3 209 1096-1321 4-228 (254)
130 PRK13631 cbiO cobalt transport 100.0 4.4E-42 9.6E-47 397.9 22.0 219 1093-1321 18-266 (320)
131 cd03260 ABC_PstB_phosphate_tra 100.0 6.5E-42 1.4E-46 380.8 21.1 211 1097-1318 1-227 (227)
132 KOG0065 Pleiotropic drug resis 100.0 1.9E-40 4.1E-45 414.8 36.2 199 1109-1317 802-1018(1391)
133 cd03261 ABC_Org_Solvent_Resist 100.0 8.5E-42 1.8E-46 381.8 21.3 212 1097-1321 1-227 (235)
134 COG2884 FtsE Predicted ATPase 100.0 4.8E-42 1E-46 345.3 16.4 207 1097-1315 2-221 (223)
135 COG1136 SalX ABC-type antimicr 100.0 2.5E-41 5.5E-46 361.5 22.9 204 1097-1311 2-222 (226)
136 PRK14250 phosphate ABC transpo 100.0 3.5E-41 7.5E-46 377.8 24.6 223 1096-1331 3-232 (241)
137 PRK14269 phosphate ABC transpo 100.0 3E-41 6.6E-46 379.7 23.6 219 1096-1323 2-233 (246)
138 COG3638 ABC-type phosphate/pho 100.0 1.3E-41 2.8E-46 355.1 18.4 221 1096-1331 3-245 (258)
139 PRK13650 cbiO cobalt transport 100.0 3.1E-41 6.7E-46 385.7 22.4 215 1096-1321 4-230 (279)
140 PRK11153 metN DL-methionine tr 100.0 3.4E-41 7.3E-46 395.1 22.4 224 1097-1331 2-242 (343)
141 PRK11650 ugpC glycerol-3-phosp 100.0 6E-41 1.3E-45 393.2 23.8 218 1096-1327 3-231 (356)
142 cd03248 ABCC_TAP TAP, the Tran 100.0 6E-41 1.3E-45 372.8 22.4 217 1093-1309 8-226 (226)
143 PRK11432 fbpC ferric transport 100.0 5.6E-41 1.2E-45 392.2 23.2 217 1095-1326 5-232 (351)
144 cd03263 ABC_subfamily_A The AB 100.0 5.4E-41 1.2E-45 371.6 20.6 210 1097-1318 1-219 (220)
145 PRK13637 cbiO cobalt transport 100.0 6.6E-41 1.4E-45 384.3 22.0 215 1096-1321 2-235 (287)
146 PRK14273 phosphate ABC transpo 100.0 1.2E-40 2.6E-45 376.9 23.3 222 1096-1326 7-244 (254)
147 PRK10744 pstB phosphate transp 100.0 1.8E-40 3.9E-45 376.4 24.7 220 1094-1322 11-246 (260)
148 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-40 3.1E-45 374.6 23.7 221 1097-1326 2-238 (247)
149 PRK13635 cbiO cobalt transport 100.0 1E-40 2.3E-45 381.1 22.7 215 1096-1321 5-230 (279)
150 COG4615 PvdE ABC-type sideroph 100.0 6.4E-38 1.4E-42 344.6 43.4 472 818-1312 50-529 (546)
151 PRK13647 cbiO cobalt transport 100.0 9.9E-41 2.1E-45 380.5 21.9 212 1096-1319 4-226 (274)
152 COG1135 AbcC ABC-type metal io 100.0 5.9E-41 1.3E-45 362.9 18.8 207 452-666 2-233 (339)
153 cd03296 ABC_CysA_sulfate_impor 100.0 1.5E-40 3.3E-45 372.5 22.9 213 1096-1323 2-229 (239)
154 PRK14242 phosphate transporter 100.0 1.7E-40 3.7E-45 375.5 23.3 219 1096-1323 6-240 (253)
155 TIGR00960 3a0501s02 Type II (G 100.0 7.5E-41 1.6E-45 369.3 19.7 202 1097-1309 2-216 (216)
156 cd03219 ABC_Mj1267_LivG_branch 100.0 1.1E-40 2.3E-45 373.4 21.1 212 1097-1321 1-233 (236)
157 COG3840 ThiQ ABC-type thiamine 100.0 8E-41 1.7E-45 333.1 17.7 210 1097-1323 2-222 (231)
158 cd03256 ABC_PhnC_transporter A 100.0 1.2E-40 2.6E-45 374.2 21.6 211 1097-1319 1-233 (241)
159 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-40 2.4E-45 390.4 22.1 216 1096-1326 4-230 (353)
160 cd03250 ABCC_MRP_domain1 Domai 100.0 1.8E-40 3.9E-45 362.8 22.1 199 1097-1308 1-204 (204)
161 COG4178 ABC-type uncharacteriz 100.0 5.1E-38 1.1E-42 375.3 44.8 465 818-1305 88-587 (604)
162 TIGR01186 proV glycine betaine 100.0 7.3E-41 1.6E-45 390.9 19.9 205 1111-1326 6-225 (363)
163 COG3842 PotA ABC-type spermidi 100.0 7.2E-41 1.6E-45 380.7 19.3 218 1095-1327 4-233 (352)
164 PRK13646 cbiO cobalt transport 100.0 1.4E-40 3E-45 381.7 21.9 215 1096-1321 2-236 (286)
165 cd03258 ABC_MetN_methionine_tr 100.0 1.4E-40 2.9E-45 371.7 21.1 214 1097-1321 2-231 (233)
166 PRK13643 cbiO cobalt transport 100.0 1.7E-40 3.7E-45 381.1 22.1 214 1097-1321 2-234 (288)
167 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.6E-40 3.5E-45 373.0 21.4 221 1097-1329 1-235 (242)
168 TIGR02315 ABC_phnC phosphonate 100.0 1.7E-40 3.7E-45 373.4 21.7 211 1097-1319 2-234 (243)
169 COG1116 TauB ABC-type nitrate/ 100.0 2E-40 4.3E-45 353.7 20.8 216 1096-1332 3-236 (248)
170 PRK14247 phosphate ABC transpo 100.0 3.1E-40 6.7E-45 372.7 23.6 224 1096-1328 3-242 (250)
171 PRK14235 phosphate transporter 100.0 3.4E-40 7.3E-45 375.2 24.0 222 1093-1323 16-254 (267)
172 PRK14259 phosphate ABC transpo 100.0 3.9E-40 8.5E-45 374.8 24.4 222 1093-1323 10-256 (269)
173 COG1116 TauB ABC-type nitrate/ 100.0 1.4E-40 3E-45 354.9 19.0 190 451-654 3-212 (248)
174 PRK10851 sulfate/thiosulfate t 100.0 2.6E-40 5.7E-45 387.3 23.4 216 1096-1326 2-232 (353)
175 PRK14267 phosphate ABC transpo 100.0 2.7E-40 5.9E-45 373.9 22.7 219 1096-1323 4-240 (253)
176 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.1E-39 2.4E-44 370.7 27.3 219 1094-1330 37-256 (282)
177 PRK13632 cbiO cobalt transport 100.0 3.7E-40 8E-45 375.7 23.3 215 1096-1321 7-232 (271)
178 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-40 3.4E-45 365.9 19.6 202 1097-1313 1-213 (213)
179 PRK13636 cbiO cobalt transport 100.0 3.1E-40 6.7E-45 378.2 22.3 214 1096-1321 5-232 (283)
180 TIGR03258 PhnT 2-aminoethylpho 100.0 2.8E-40 6E-45 387.5 22.2 218 1094-1326 3-234 (362)
181 PRK15079 oligopeptide ABC tran 100.0 4.5E-40 9.7E-45 382.5 23.7 225 1096-1331 8-263 (331)
182 PRK11629 lolD lipoprotein tran 100.0 3.1E-40 6.8E-45 368.5 21.5 208 1096-1314 5-228 (233)
183 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.2E-39 4.7E-44 368.3 28.6 235 424-666 15-249 (282)
184 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2E-40 4.3E-45 377.3 20.0 217 1098-1327 26-257 (269)
185 PRK09536 btuD corrinoid ABC tr 100.0 3.7E-40 8E-45 389.4 22.7 220 1096-1330 3-236 (402)
186 PRK09452 potA putrescine/sperm 100.0 4.8E-40 1E-44 386.7 23.6 217 1095-1326 13-240 (375)
187 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.9E-40 1.3E-44 367.0 22.9 211 1097-1321 2-222 (236)
188 PRK13651 cobalt transporter AT 100.0 4.9E-40 1.1E-44 378.6 22.7 215 1096-1321 2-255 (305)
189 PRK11000 maltose/maltodextrin 100.0 3.9E-40 8.4E-45 389.1 22.3 216 1096-1326 3-229 (369)
190 cd03224 ABC_TM1139_LivF_branch 100.0 3.7E-40 8E-45 365.6 20.8 212 1097-1320 1-221 (222)
191 cd03247 ABCC_cytochrome_bd The 100.0 3.7E-40 8E-45 352.1 20.0 178 1097-1313 1-178 (178)
192 PRK11308 dppF dipeptide transp 100.0 8.3E-40 1.8E-44 380.0 24.5 226 1096-1331 5-256 (327)
193 PRK14244 phosphate ABC transpo 100.0 3.1E-40 6.7E-45 372.8 20.4 221 1097-1326 6-243 (251)
194 COG4615 PvdE ABC-type sideroph 100.0 3.4E-37 7.3E-42 338.9 43.2 506 126-656 4-529 (546)
195 PRK13640 cbiO cobalt transport 100.0 9E-40 2E-44 374.2 24.2 216 1095-1321 4-233 (282)
196 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.7E-40 5.7E-45 365.6 19.1 202 1097-1309 1-218 (218)
197 PRK14245 phosphate ABC transpo 100.0 6.1E-40 1.3E-44 370.2 22.3 220 1096-1324 3-238 (250)
198 PRK14237 phosphate transporter 100.0 1.1E-39 2.3E-44 371.2 24.3 220 1095-1323 19-254 (267)
199 PRK10619 histidine/lysine/argi 100.0 7.7E-40 1.7E-44 370.8 23.0 218 1094-1323 3-244 (257)
200 PRK11831 putative ABC transpor 100.0 6.5E-40 1.4E-44 373.3 22.4 223 1096-1331 7-244 (269)
201 PRK14251 phosphate ABC transpo 100.0 6.2E-40 1.3E-44 370.5 22.1 223 1096-1327 4-242 (251)
202 PRK13642 cbiO cobalt transport 100.0 8.3E-40 1.8E-44 373.8 23.3 215 1096-1321 4-230 (277)
203 PRK13634 cbiO cobalt transport 100.0 5.1E-40 1.1E-44 377.5 21.6 216 1096-1321 2-236 (290)
204 PRK14268 phosphate ABC transpo 100.0 7.1E-40 1.5E-44 371.1 22.3 222 1096-1326 12-248 (258)
205 PRK13652 cbiO cobalt transport 100.0 7.6E-40 1.6E-44 374.1 22.6 214 1096-1321 3-228 (277)
206 cd03265 ABC_DrrA DrrA is the A 100.0 6.5E-40 1.4E-44 362.8 21.4 208 1097-1318 1-219 (220)
207 TIGR03005 ectoine_ehuA ectoine 100.0 8.5E-40 1.8E-44 369.5 22.7 214 1097-1323 1-239 (252)
208 PRK13648 cbiO cobalt transport 100.0 7.5E-40 1.6E-44 373.0 22.3 215 1096-1321 7-232 (269)
209 cd03226 ABC_cobalt_CbiO_domain 100.0 5.3E-40 1.1E-44 359.4 20.2 198 1098-1310 1-205 (205)
210 cd03266 ABC_NatA_sodium_export 100.0 5.7E-40 1.2E-44 362.9 20.6 205 1097-1313 2-218 (218)
211 PRK13537 nodulation ABC transp 100.0 6.1E-40 1.3E-44 378.8 21.7 213 1095-1321 6-228 (306)
212 PRK14239 phosphate transporter 100.0 8.3E-40 1.8E-44 369.8 22.2 219 1096-1323 5-239 (252)
213 COG1117 PstB ABC-type phosphat 100.0 2.1E-40 4.5E-45 339.4 15.5 205 450-665 6-238 (253)
214 PRK14274 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 369.3 23.9 221 1096-1325 12-248 (259)
215 cd03264 ABC_drug_resistance_li 100.0 5E-40 1.1E-44 361.4 19.8 202 1097-1313 1-211 (211)
216 PRK14262 phosphate ABC transpo 100.0 8.3E-40 1.8E-44 369.2 22.0 224 1096-1328 3-242 (250)
217 PRK13633 cobalt transporter AT 100.0 1.1E-39 2.4E-44 373.4 23.0 215 1096-1321 4-234 (280)
218 PRK14256 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 367.3 23.9 222 1094-1324 2-240 (252)
219 PRK13644 cbiO cobalt transport 100.0 1.1E-39 2.4E-44 371.9 22.8 213 1097-1321 2-225 (274)
220 PRK14240 phosphate transporter 100.0 1.4E-39 3E-44 367.4 23.4 222 1095-1325 2-239 (250)
221 PRK14248 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 370.3 24.1 219 1096-1323 21-255 (268)
222 TIGR03411 urea_trans_UrtD urea 100.0 1.1E-39 2.3E-44 366.6 22.1 212 1096-1320 2-231 (242)
223 TIGR02769 nickel_nikE nickel i 100.0 1.8E-39 4E-44 369.0 24.3 226 1096-1331 2-251 (265)
224 PRK14260 phosphate ABC transpo 100.0 1.3E-39 2.9E-44 369.1 22.9 221 1095-1324 6-247 (259)
225 PRK10575 iron-hydroxamate tran 100.0 8.7E-40 1.9E-44 371.6 21.4 212 1096-1320 11-237 (265)
226 cd03268 ABC_BcrA_bacitracin_re 100.0 8E-40 1.7E-44 358.9 20.3 202 1097-1313 1-208 (208)
227 PRK14266 phosphate ABC transpo 100.0 1.4E-39 3E-44 367.4 22.7 223 1096-1327 3-241 (250)
228 PRK11124 artP arginine transpo 100.0 1.3E-39 2.7E-44 365.9 22.2 215 1096-1323 2-233 (242)
229 PRK11022 dppD dipeptide transp 100.0 1.7E-39 3.7E-44 377.6 23.9 228 1096-1331 3-255 (326)
230 COG1125 OpuBA ABC-type proline 100.0 5.4E-40 1.2E-44 344.3 17.6 203 452-666 2-227 (309)
231 PRK09493 glnQ glutamine ABC tr 100.0 1.6E-39 3.4E-44 364.7 22.5 213 1097-1322 2-227 (240)
232 TIGR02211 LolD_lipo_ex lipopro 100.0 1.5E-39 3.1E-44 360.5 21.9 203 1097-1310 2-220 (221)
233 PRK11264 putative amino-acid A 100.0 2.2E-39 4.8E-44 365.9 23.7 222 1096-1330 3-244 (250)
234 cd03218 ABC_YhbG The ABC trans 100.0 9.9E-40 2.1E-44 364.6 20.5 211 1097-1320 1-222 (232)
235 cd03225 ABC_cobalt_CbiO_domain 100.0 6.8E-40 1.5E-44 360.4 18.9 200 1098-1308 1-211 (211)
236 PRK14249 phosphate ABC transpo 100.0 2.5E-39 5.3E-44 365.5 23.9 218 1096-1322 4-237 (251)
237 PRK10070 glycine betaine trans 100.0 1.2E-39 2.6E-44 384.8 22.3 220 1096-1326 4-260 (400)
238 PRK14236 phosphate transporter 100.0 2.5E-39 5.3E-44 369.2 24.0 222 1093-1323 22-259 (272)
239 PRK14238 phosphate transporter 100.0 2.9E-39 6.2E-44 368.2 24.4 223 1092-1323 20-258 (271)
240 PRK11607 potG putrescine trans 100.0 1.5E-39 3.3E-44 383.3 22.7 217 1095-1326 18-245 (377)
241 PRK14254 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 369.7 24.6 221 1094-1323 37-272 (285)
242 PRK11231 fecE iron-dicitrate t 100.0 1.5E-39 3.2E-44 368.0 21.4 211 1097-1320 3-227 (255)
243 PRK14243 phosphate transporter 100.0 3.1E-39 6.6E-44 366.7 24.0 219 1096-1323 10-251 (264)
244 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3E-39 6.5E-44 350.2 22.8 199 451-665 4-228 (254)
245 cd03250 ABCC_MRP_domain1 Domai 100.0 3E-39 6.6E-44 353.1 22.9 201 452-652 1-204 (204)
246 cd03301 ABC_MalK_N The N-termi 100.0 9.6E-40 2.1E-44 359.8 19.0 202 1097-1313 1-213 (213)
247 PRK14270 phosphate ABC transpo 100.0 3.3E-39 7.1E-44 364.4 23.6 218 1096-1322 4-237 (251)
248 TIGR02673 FtsE cell division A 100.0 9.7E-40 2.1E-44 360.0 18.6 200 1097-1308 2-214 (214)
249 PRK09473 oppD oligopeptide tra 100.0 2.4E-39 5.3E-44 376.6 23.0 228 1096-1331 12-263 (330)
250 cd03292 ABC_FtsE_transporter F 100.0 1.2E-39 2.5E-44 359.5 19.2 201 1097-1309 1-214 (214)
251 cd03300 ABC_PotA_N PotA is an 100.0 1.5E-39 3.3E-44 362.6 20.3 212 1097-1323 1-223 (232)
252 cd03290 ABCC_SUR1_N The SUR do 100.0 2.5E-39 5.4E-44 357.6 21.9 211 1097-1308 1-218 (218)
253 cd03293 ABC_NrtD_SsuB_transpor 100.0 1E-39 2.2E-44 361.2 18.8 203 1097-1315 1-218 (220)
254 cd03252 ABCC_Hemolysin The ABC 100.0 5.9E-39 1.3E-43 359.4 25.1 218 452-671 1-232 (237)
255 PRK14261 phosphate ABC transpo 100.0 3.5E-39 7.6E-44 364.7 23.3 225 1096-1329 6-246 (253)
256 PRK14252 phosphate ABC transpo 100.0 3.2E-39 7E-44 367.2 23.1 223 1091-1322 11-251 (265)
257 PRK13641 cbiO cobalt transport 100.0 2.9E-39 6.3E-44 371.0 22.9 215 1096-1321 2-235 (287)
258 PRK13649 cbiO cobalt transport 100.0 2.5E-39 5.3E-44 371.2 22.1 215 1097-1321 3-235 (280)
259 PRK10253 iron-enterobactin tra 100.0 2.6E-39 5.6E-44 367.7 22.0 213 1095-1320 6-233 (265)
260 TIGR03410 urea_trans_UrtE urea 100.0 2.7E-39 5.7E-44 360.6 21.6 211 1097-1319 1-220 (230)
261 PRK11614 livF leucine/isoleuci 100.0 2.5E-39 5.4E-44 362.4 21.2 212 1096-1320 5-226 (237)
262 PRK13645 cbiO cobalt transport 100.0 2.4E-39 5.1E-44 372.6 21.7 217 1094-1321 4-241 (289)
263 cd03246 ABCC_Protease_Secretio 100.0 2.2E-39 4.9E-44 344.2 19.8 172 1097-1309 1-173 (173)
264 PRK14263 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 364.3 23.4 222 1096-1326 8-251 (261)
265 COG4178 ABC-type uncharacteriz 100.0 8.5E-36 1.8E-40 356.3 52.5 442 197-649 107-587 (604)
266 PRK14271 phosphate ABC transpo 100.0 6E-39 1.3E-43 366.0 24.5 219 1096-1323 21-254 (276)
267 PRK15112 antimicrobial peptide 100.0 3.4E-39 7.3E-44 367.0 22.3 227 1096-1333 4-253 (267)
268 PRK13548 hmuV hemin importer A 100.0 5.4E-39 1.2E-43 363.5 23.6 212 1096-1320 2-230 (258)
269 PRK14258 phosphate ABC transpo 100.0 4.4E-39 9.6E-44 365.0 22.9 221 1095-1324 6-249 (261)
270 PRK13638 cbiO cobalt transport 100.0 2.9E-39 6.2E-44 368.6 21.3 212 1097-1321 2-226 (271)
271 PRK11247 ssuB aliphatic sulfon 100.0 4.3E-39 9.3E-44 362.4 22.4 204 1095-1316 11-219 (257)
272 COG1127 Ttg2A ABC-type transpo 100.0 6.2E-39 1.4E-43 335.9 21.8 204 450-668 7-239 (263)
273 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.5E-39 7.6E-44 354.7 21.1 200 1097-1313 1-211 (211)
274 PRK10895 lipopolysaccharide AB 100.0 4.6E-39 1E-43 361.1 22.3 213 1096-1321 3-227 (241)
275 TIGR00968 3a0106s01 sulfate AB 100.0 4.8E-39 1E-43 359.6 22.3 210 1097-1321 1-221 (237)
276 PRK13639 cbiO cobalt transport 100.0 4E-39 8.6E-44 367.8 22.1 213 1097-1321 2-227 (275)
277 TIGR01288 nodI ATP-binding ABC 100.0 3.7E-39 8E-44 373.0 22.1 212 1096-1321 4-225 (303)
278 COG1120 FepC ABC-type cobalami 100.0 3.2E-39 6.9E-44 352.1 20.2 201 451-665 2-229 (258)
279 PRK14272 phosphate ABC transpo 100.0 4.7E-39 1E-43 363.7 22.4 224 1096-1328 4-244 (252)
280 PRK10584 putative ABC transpor 100.0 4.6E-39 1E-43 358.1 21.9 206 1096-1312 6-227 (228)
281 PRK14265 phosphate ABC transpo 100.0 7.6E-39 1.7E-43 365.0 24.2 222 1093-1323 17-261 (274)
282 PRK14241 phosphate transporter 100.0 4.7E-39 1E-43 364.6 22.3 219 1096-1323 4-245 (258)
283 PRK14253 phosphate ABC transpo 100.0 7.1E-39 1.5E-43 361.4 23.4 219 1096-1323 3-236 (249)
284 cd03235 ABC_Metallic_Cations A 100.0 2.1E-39 4.6E-44 356.9 18.6 197 1098-1313 1-213 (213)
285 PRK15093 antimicrobial peptide 100.0 6.9E-39 1.5E-43 374.0 23.9 228 1096-1331 3-260 (330)
286 PRK14275 phosphate ABC transpo 100.0 6.8E-39 1.5E-43 367.5 23.0 224 1094-1326 37-276 (286)
287 PRK13536 nodulation factor exp 100.0 3.7E-39 8E-44 375.7 21.0 212 1096-1321 41-262 (340)
288 TIGR03415 ABC_choXWV_ATP choli 100.0 4.4E-39 9.5E-44 377.3 21.7 204 1112-1326 38-260 (382)
289 PRK14264 phosphate ABC transpo 100.0 8.7E-39 1.9E-43 369.7 23.7 221 1093-1322 42-291 (305)
290 PRK10771 thiQ thiamine transpo 100.0 1E-38 2.3E-43 356.0 23.5 208 1097-1321 2-220 (232)
291 TIGR03522 GldA_ABC_ATP gliding 100.0 5.5E-39 1.2E-43 371.0 21.7 211 1097-1321 3-222 (301)
292 PRK11300 livG leucine/isoleuci 100.0 6.8E-39 1.5E-43 363.0 21.8 213 1096-1321 5-244 (255)
293 TIGR03873 F420-0_ABC_ATP propo 100.0 6.4E-39 1.4E-43 363.0 21.6 211 1097-1320 2-226 (256)
294 PRK10247 putative ABC transpor 100.0 6E-39 1.3E-43 355.9 20.8 209 1096-1316 7-223 (225)
295 PRK10418 nikD nickel transport 100.0 1.1E-38 2.4E-43 360.5 23.3 226 1096-1334 4-245 (254)
296 PRK10908 cell division protein 100.0 6.7E-39 1.5E-43 355.2 20.8 203 1097-1311 2-217 (222)
297 cd03257 ABC_NikE_OppD_transpor 100.0 1E-38 2.2E-43 355.7 22.3 206 1097-1313 2-228 (228)
298 COG3839 MalK ABC-type sugar tr 100.0 5.4E-39 1.2E-43 363.5 20.2 201 451-665 3-224 (338)
299 PRK14255 phosphate ABC transpo 100.0 1E-38 2.2E-43 360.8 22.5 222 1096-1326 5-242 (252)
300 cd03269 ABC_putative_ATPase Th 100.0 3.7E-39 8E-44 354.2 18.3 200 1097-1313 1-210 (210)
301 PRK11701 phnK phosphonate C-P 100.0 1.8E-38 4E-43 359.7 23.7 223 1096-1330 6-251 (258)
302 PRK14246 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 358.7 23.3 225 1096-1329 10-250 (257)
303 cd03299 ABC_ModC_like Archeal 100.0 1E-38 2.3E-43 356.4 21.3 210 1097-1322 1-221 (235)
304 cd03262 ABC_HisP_GlnQ_permease 100.0 6.5E-39 1.4E-43 353.3 18.9 200 1097-1309 1-213 (213)
305 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.4E-38 7.4E-43 353.5 24.7 214 452-666 1-228 (238)
306 TIGR01978 sufC FeS assembly AT 100.0 1.1E-38 2.4E-43 358.8 20.7 212 1097-1319 1-233 (243)
307 TIGR01277 thiQ thiamine ABC tr 100.0 1.2E-38 2.6E-43 350.7 20.3 201 1097-1314 1-212 (213)
308 PRK13547 hmuV hemin importer A 100.0 2.1E-38 4.7E-43 359.8 22.9 211 1097-1320 2-244 (272)
309 COG1118 CysA ABC-type sulfate/ 100.0 5.8E-39 1.2E-43 346.3 17.1 216 1096-1326 2-233 (345)
310 COG1118 CysA ABC-type sulfate/ 100.0 7.6E-39 1.6E-43 345.3 17.8 200 451-665 2-228 (345)
311 cd03254 ABCC_Glucan_exporter_l 100.0 4.8E-38 1E-42 350.3 24.8 211 451-664 2-226 (229)
312 cd03288 ABCC_SUR2 The SUR doma 100.0 6.8E-38 1.5E-42 354.5 26.3 215 449-665 17-244 (257)
313 COG1136 SalX ABC-type antimicr 100.0 2.6E-38 5.6E-43 338.4 21.5 193 452-654 2-221 (226)
314 PRK11144 modC molybdate transp 100.0 2E-38 4.2E-43 373.1 22.6 212 1097-1324 2-222 (352)
315 TIGR01188 drrA daunorubicin re 100.0 1.1E-38 2.4E-43 368.9 20.1 203 1105-1321 2-214 (302)
316 COG3842 PotA ABC-type spermidi 100.0 7.9E-39 1.7E-43 364.1 18.5 202 450-665 4-227 (352)
317 cd03253 ABCC_ATM1_transporter 100.0 6.3E-38 1.4E-42 351.0 25.1 214 452-668 1-228 (236)
318 cd03251 ABCC_MsbA MsbA is an e 100.0 6.6E-38 1.4E-42 350.4 25.1 213 452-666 1-227 (234)
319 COG0410 LivF ABC-type branched 100.0 1.3E-38 2.8E-43 333.7 18.0 215 1096-1322 3-228 (237)
320 COG1122 CbiO ABC-type cobalt t 100.0 1.5E-38 3.3E-43 347.9 19.4 202 451-665 3-229 (235)
321 PRK00349 uvrA excinuclease ABC 100.0 1.2E-37 2.7E-42 397.7 30.9 227 1096-1331 614-938 (943)
322 COG1131 CcmA ABC-type multidru 100.0 1.4E-38 3.1E-43 363.6 20.1 213 1096-1321 4-227 (293)
323 PRK09984 phosphonate/organopho 100.0 3.9E-38 8.4E-43 357.9 23.0 222 1096-1333 4-252 (262)
324 cd03244 ABCC_MRP_domain2 Domai 100.0 7.1E-38 1.5E-42 346.9 24.6 206 451-658 2-220 (221)
325 COG0444 DppD ABC-type dipeptid 100.0 3.7E-38 7.9E-43 347.7 20.8 223 1097-1330 2-253 (316)
326 PRK11248 tauB taurine transpor 100.0 3.1E-38 6.8E-43 356.1 20.1 201 1097-1315 2-215 (255)
327 COG3840 ThiQ ABC-type thiamine 100.0 3.4E-38 7.4E-43 314.4 17.6 198 452-665 2-220 (231)
328 PRK10419 nikE nickel transport 100.0 9.6E-38 2.1E-42 355.1 23.3 222 1096-1328 3-248 (268)
329 TIGR02982 heterocyst_DevA ABC 100.0 3.7E-38 8.1E-43 348.6 18.7 202 1097-1309 2-219 (220)
330 TIGR02142 modC_ABC molybdenum 100.0 5.6E-38 1.2E-42 369.9 21.2 212 1101-1327 4-228 (354)
331 cd03228 ABCC_MRP_Like The MRP 100.0 7.3E-38 1.6E-42 332.0 19.7 171 1097-1308 1-171 (171)
332 TIGR03740 galliderm_ABC gallid 100.0 8.4E-38 1.8E-42 346.7 20.8 204 1097-1317 1-210 (223)
333 KOG0066 eIF2-interacting prote 100.0 1.4E-37 3E-42 343.2 21.8 193 1096-1312 586-782 (807)
334 TIGR02323 CP_lyasePhnK phospho 100.0 2.1E-37 4.7E-42 350.2 23.4 222 1096-1329 3-247 (253)
335 COG1124 DppF ABC-type dipeptid 100.0 1.6E-37 3.4E-42 327.7 20.5 205 451-665 3-232 (252)
336 COG1245 Predicted ATPase, RNas 100.0 7.7E-37 1.7E-41 342.1 27.1 176 1120-1320 363-547 (591)
337 PRK09544 znuC high-affinity zi 100.0 2.2E-37 4.8E-42 347.9 22.4 208 1096-1330 4-217 (251)
338 cd03230 ABC_DR_subfamily_A Thi 100.0 1.1E-37 2.3E-42 331.4 18.6 170 1097-1309 1-173 (173)
339 PRK13631 cbiO cobalt transport 100.0 2.4E-37 5.1E-42 358.4 23.1 209 450-665 20-266 (320)
340 TIGR02314 ABC_MetN D-methionin 100.0 1.2E-37 2.6E-42 362.1 20.6 202 452-665 2-231 (343)
341 cd03245 ABCC_bacteriocin_expor 100.0 4.4E-37 9.6E-42 340.3 24.2 205 451-657 2-220 (220)
342 COG3638 ABC-type phosphate/pho 100.0 8.6E-38 1.9E-42 326.5 17.0 204 451-664 3-237 (258)
343 cd03229 ABC_Class3 This class 100.0 1.5E-37 3.3E-42 331.7 19.1 172 1097-1308 1-178 (178)
344 cd03217 ABC_FeS_Assembly ABC-t 100.0 2.2E-37 4.8E-42 336.8 20.6 185 1097-1319 1-192 (200)
345 PRK11650 ugpC glycerol-3-phosp 100.0 2.6E-37 5.5E-42 362.6 22.4 202 451-665 3-225 (356)
346 cd03234 ABCG_White The White s 100.0 2E-37 4.4E-42 344.2 19.9 203 1097-1313 4-226 (226)
347 PRK15056 manganese/iron transp 100.0 3.1E-37 6.7E-42 351.9 21.9 209 1096-1320 6-230 (272)
348 COG4555 NatA ABC-type Na+ tran 100.0 8.9E-38 1.9E-42 316.9 15.1 213 1097-1322 2-224 (245)
349 cd03233 ABC_PDR_domain1 The pl 100.0 2E-37 4.4E-42 337.4 19.1 190 1096-1313 3-202 (202)
350 cd03213 ABCG_EPDR ABCG transpo 100.0 2.4E-37 5.2E-42 334.7 18.6 182 1096-1313 3-194 (194)
351 COG1137 YhbG ABC-type (unclass 100.0 1.8E-38 3.9E-43 321.5 9.1 216 1095-1323 3-231 (243)
352 cd03297 ABC_ModC_molybdenum_tr 100.0 2.6E-37 5.7E-42 340.5 19.2 199 1098-1313 3-214 (214)
353 cd03261 ABC_Org_Solvent_Resist 100.0 4.2E-37 9.1E-42 343.9 21.0 199 452-665 1-227 (235)
354 cd03214 ABC_Iron-Siderophores_ 100.0 3.4E-37 7.4E-42 329.7 18.8 177 1098-1313 1-180 (180)
355 CHL00131 ycf16 sulfate ABC tra 100.0 6.7E-37 1.4E-41 346.1 21.8 211 1096-1318 7-239 (252)
356 cd03215 ABC_Carb_Monos_II This 100.0 2.5E-37 5.5E-42 331.3 17.3 172 1096-1309 4-182 (182)
357 cd03223 ABCD_peroxisomal_ALDP 100.0 5.2E-37 1.1E-41 323.3 19.3 164 1097-1308 1-164 (166)
358 TIGR01186 proV glycine betaine 100.0 3E-37 6.6E-42 360.5 19.4 192 466-665 5-220 (363)
359 COG2884 FtsE Predicted ATPase 100.0 4.1E-37 8.9E-42 309.8 17.3 193 452-657 2-219 (223)
360 TIGR03608 L_ocin_972_ABC putat 100.0 2.4E-37 5.2E-42 339.0 17.1 193 1099-1304 1-206 (206)
361 cd03232 ABC_PDR_domain2 The pl 100.0 3.1E-37 6.6E-42 333.4 17.6 181 1096-1313 3-192 (192)
362 COG1123 ATPase components of v 100.0 8.4E-37 1.8E-41 360.6 22.6 226 1096-1330 5-254 (539)
363 COG4619 ABC-type uncharacteriz 100.0 2.9E-37 6.2E-42 303.4 15.4 197 1105-1311 10-214 (223)
364 PRK13637 cbiO cobalt transport 100.0 8.2E-37 1.8E-41 350.4 21.7 204 451-664 2-234 (287)
365 PRK11432 fbpC ferric transport 100.0 7.2E-37 1.5E-41 357.7 21.5 200 451-665 6-227 (351)
366 PRK13643 cbiO cobalt transport 100.0 8.9E-37 1.9E-41 350.3 21.9 202 452-664 2-233 (288)
367 cd03290 ABCC_SUR1_N The SUR do 100.0 1.6E-36 3.5E-41 335.2 22.7 198 453-652 2-218 (218)
368 PRK13634 cbiO cobalt transport 100.0 1.1E-36 2.4E-41 349.9 21.7 202 452-664 3-235 (290)
369 PRK03695 vitamin B12-transport 100.0 1E-36 2.3E-41 342.8 20.9 205 1098-1320 2-222 (248)
370 TIGR02770 nickel_nikD nickel i 100.0 8.6E-37 1.9E-41 340.0 20.0 206 1113-1328 1-223 (230)
371 PRK13650 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 348.3 21.2 203 451-665 4-230 (279)
372 COG0411 LivG ABC-type branched 100.0 2.7E-37 5.8E-42 326.3 13.9 214 1096-1322 4-241 (250)
373 cd03296 ABC_CysA_sulfate_impor 100.0 2.4E-36 5.1E-41 338.6 22.3 199 451-664 2-226 (239)
374 TIGR00630 uvra excinuclease AB 100.0 1.1E-35 2.4E-40 379.2 31.3 216 1096-1318 612-923 (924)
375 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-36 2.3E-41 338.9 19.3 195 452-661 1-226 (227)
376 TIGR03265 PhnT2 putative 2-ami 100.0 1.3E-36 2.9E-41 356.1 20.9 201 451-665 4-225 (353)
377 cd03248 ABCC_TAP TAP, the Tran 100.0 3.3E-36 7.2E-41 334.7 23.1 203 450-653 10-226 (226)
378 PRK13651 cobalt transporter AT 100.0 2.3E-36 4.9E-41 348.3 22.4 205 451-665 2-255 (305)
379 PRK09452 potA putrescine/sperm 100.0 2.1E-36 4.6E-41 355.9 22.3 200 451-665 14-235 (375)
380 PRK13646 cbiO cobalt transport 100.0 2E-36 4.3E-41 347.3 21.4 202 451-664 2-235 (286)
381 PRK09580 sufC cysteine desulfu 100.0 4E-36 8.6E-41 339.1 23.2 210 1097-1318 2-233 (248)
382 cd03231 ABC_CcmA_heme_exporter 100.0 2.8E-36 6E-41 328.6 21.0 194 1097-1304 1-198 (201)
383 PRK00635 excinuclease ABC subu 100.0 1.5E-35 3.2E-40 391.5 31.7 209 1096-1321 600-907 (1809)
384 cd03219 ABC_Mj1267_LivG_branch 100.0 2.2E-36 4.9E-41 338.5 20.4 203 452-664 1-232 (236)
385 TIGR03258 PhnT 2-aminoethylpho 100.0 2.1E-36 4.5E-41 354.7 21.0 202 450-665 4-229 (362)
386 PRK10851 sulfate/thiosulfate t 100.0 3E-36 6.5E-41 353.1 22.1 200 451-665 2-227 (353)
387 PRK13647 cbiO cobalt transport 100.0 2.7E-36 5.8E-41 344.1 21.0 198 451-662 4-225 (274)
388 TIGR01184 ntrCD nitrate transp 100.0 1.6E-36 3.4E-41 337.5 18.5 190 1114-1319 1-203 (230)
389 COG4175 ProV ABC-type proline/ 100.0 2.6E-36 5.7E-41 325.3 19.5 220 1096-1326 4-260 (386)
390 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.7E-36 1.9E-40 326.6 24.0 189 450-658 5-206 (207)
391 cd03259 ABC_Carb_Solutes_like 100.0 2.3E-36 5.1E-41 332.7 19.3 191 452-657 1-213 (213)
392 PRK11000 maltose/maltodextrin 100.0 3.2E-36 6.9E-41 355.8 21.5 200 451-665 3-224 (369)
393 PRK14250 phosphate ABC transpo 100.0 7.4E-36 1.6E-40 334.8 23.4 201 451-665 3-222 (241)
394 PRK14269 phosphate ABC transpo 100.0 4E-36 8.7E-41 338.1 21.3 203 451-664 2-230 (246)
395 TIGR02315 ABC_phnC phosphonate 100.0 5E-36 1.1E-40 337.2 21.9 197 452-662 2-233 (243)
396 cd03226 ABC_cobalt_CbiO_domain 100.0 2.8E-36 6E-41 330.1 19.3 187 454-654 2-205 (205)
397 PRK13549 xylose transporter AT 100.0 3.3E-36 7.2E-41 373.5 22.2 212 1096-1320 5-232 (506)
398 PRK15439 autoinducer 2 ABC tra 100.0 5.5E-36 1.2E-40 371.2 24.1 212 1096-1320 11-229 (510)
399 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-36 6.4E-41 333.6 19.4 196 452-659 1-218 (220)
400 cd03265 ABC_DrrA DrrA is the A 100.0 3.2E-36 6.9E-41 333.3 19.6 197 452-662 1-219 (220)
401 cd03267 ABC_NatA_like Similar 100.0 2.1E-36 4.6E-41 337.8 18.4 191 1111-1313 34-236 (236)
402 COG4608 AppF ABC-type oligopep 100.0 3.5E-36 7.5E-41 325.5 19.1 195 1096-1330 4-209 (268)
403 PRK14242 phosphate transporter 100.0 5.5E-36 1.2E-40 338.7 21.7 204 451-665 6-238 (253)
404 TIGR00960 3a0501s02 Type II (G 100.0 2.5E-36 5.4E-41 333.3 18.5 189 452-653 2-216 (216)
405 cd03216 ABC_Carb_Monos_I This 100.0 4.7E-36 1E-40 315.1 19.6 159 1097-1311 1-162 (163)
406 cd03256 ABC_PhnC_transporter A 100.0 5E-36 1.1E-40 336.8 21.0 198 452-663 1-233 (241)
407 PRK11153 metN DL-methionine tr 100.0 3.7E-36 8.1E-41 352.5 20.8 202 452-665 2-231 (343)
408 PRK14273 phosphate ABC transpo 100.0 9.1E-36 2E-40 337.0 23.1 204 451-665 7-239 (254)
409 PRK13537 nodulation ABC transp 100.0 6.4E-36 1.4E-40 345.3 22.1 201 450-665 6-228 (306)
410 PRK09700 D-allose transporter 100.0 3.6E-36 7.7E-41 373.8 21.4 212 1096-1320 5-234 (510)
411 PRK13635 cbiO cobalt transport 100.0 9.7E-36 2.1E-40 340.2 23.0 202 451-665 5-230 (279)
412 TIGR00972 3a0107s01c2 phosphat 100.0 6.3E-36 1.4E-40 336.9 21.2 202 452-664 2-232 (247)
413 PRK10762 D-ribose transporter 100.0 5.3E-36 1.1E-40 371.2 22.3 212 1096-1320 4-230 (501)
414 PRK11629 lolD lipoprotein tran 100.0 7.6E-36 1.6E-40 333.2 21.4 196 451-658 5-228 (233)
415 PRK13538 cytochrome c biogenes 100.0 5.8E-36 1.3E-40 327.0 19.9 194 1097-1304 2-202 (204)
416 cd03268 ABC_BcrA_bacitracin_re 100.0 7.2E-36 1.6E-40 327.6 20.7 191 452-657 1-208 (208)
417 PRK13644 cbiO cobalt transport 100.0 1E-35 2.2E-40 339.4 22.6 199 452-664 2-224 (274)
418 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.8E-36 1E-40 331.6 19.3 190 452-653 1-218 (218)
419 cd03224 ABC_TM1139_LivF_branch 100.0 8E-36 1.7E-40 330.9 21.1 198 452-663 1-220 (222)
420 TIGR01257 rim_protein retinal- 100.0 2.4E-34 5.1E-39 386.1 39.2 216 1095-1322 927-1151(2272)
421 cd03263 ABC_subfamily_A The AB 100.0 7.2E-36 1.6E-40 330.7 20.6 198 452-662 1-219 (220)
422 PRK13641 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 341.5 22.1 203 451-664 2-234 (287)
423 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-35 2.7E-40 332.1 21.9 203 452-665 2-222 (236)
424 PRK10261 glutathione transport 100.0 4.5E-36 9.8E-41 379.2 20.5 223 1096-1326 12-264 (623)
425 PRK11247 ssuB aliphatic sulfon 100.0 1.4E-35 3E-40 334.0 22.2 195 451-660 12-219 (257)
426 cd03235 ABC_Metallic_Cations A 100.0 7.7E-36 1.7E-40 328.7 19.6 189 454-657 2-213 (213)
427 PRK13636 cbiO cobalt transport 100.0 1.3E-35 2.8E-40 340.1 22.2 200 451-664 5-231 (283)
428 cd03258 ABC_MetN_methionine_tr 100.0 1.2E-35 2.6E-40 331.9 21.2 201 452-664 2-230 (233)
429 PRK10938 putative molybdenum t 100.0 1E-35 2.2E-40 368.3 22.6 212 1096-1321 3-225 (490)
430 PRK11607 potG putrescine trans 100.0 1E-35 2.2E-40 350.9 21.4 202 450-665 18-240 (377)
431 cd03266 ABC_NatA_sodium_export 100.0 1E-35 2.2E-40 329.0 20.2 194 452-657 2-218 (218)
432 cd03218 ABC_YhbG The ABC trans 100.0 1E-35 2.2E-40 332.3 20.2 202 452-664 1-222 (232)
433 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.7E-36 1.4E-40 340.1 18.7 198 453-665 26-251 (269)
434 PRK10744 pstB phosphate transp 100.0 2.2E-35 4.8E-40 334.7 22.9 204 450-664 12-244 (260)
435 PRK09536 btuD corrinoid ABC tr 100.0 1.3E-35 2.9E-40 350.7 21.8 200 451-665 3-229 (402)
436 cd03301 ABC_MalK_N The N-termi 100.0 1E-35 2.2E-40 327.7 19.4 191 452-657 1-213 (213)
437 cd03295 ABC_OpuCA_Osmoprotecti 100.0 9E-36 2E-40 334.6 19.2 201 452-664 1-225 (242)
438 PRK13640 cbiO cobalt transport 100.0 2E-35 4.3E-40 338.4 22.3 202 450-664 4-232 (282)
439 PRK14235 phosphate transporter 100.0 2E-35 4.4E-40 336.0 21.9 205 449-664 17-251 (267)
440 TIGR01288 nodI ATP-binding ABC 100.0 2E-35 4.3E-40 341.9 22.2 201 450-664 3-224 (303)
441 PRK15134 microcin C ABC transp 100.0 2E-35 4.4E-40 368.4 23.9 220 1096-1323 5-249 (529)
442 PRK13540 cytochrome c biogenes 100.0 1.5E-35 3.3E-40 322.7 19.8 193 1097-1303 2-198 (200)
443 PRK13536 nodulation factor exp 100.0 1.8E-35 3.9E-40 344.9 21.7 203 448-664 38-261 (340)
444 COG4598 HisP ABC-type histidin 100.0 4.3E-36 9.4E-41 297.7 13.9 221 1096-1329 6-251 (256)
445 PRK14274 phosphate ABC transpo 100.0 2.6E-35 5.6E-40 334.2 22.3 205 450-665 11-244 (259)
446 PRK13543 cytochrome c biogenes 100.0 2.3E-35 4.9E-40 324.7 21.2 195 1096-1306 11-212 (214)
447 PRK13649 cbiO cobalt transport 100.0 1.8E-35 4E-40 339.1 21.2 203 451-664 2-234 (280)
448 PRK13645 cbiO cobalt transport 100.0 2E-35 4.3E-40 340.1 21.4 203 451-664 6-240 (289)
449 PRK09493 glnQ glutamine ABC tr 100.0 2.5E-35 5.5E-40 330.6 21.6 198 452-664 2-225 (240)
450 PRK13642 cbiO cobalt transport 100.0 3E-35 6.6E-40 336.2 22.5 203 451-665 4-230 (277)
451 cd03247 ABCC_cytochrome_bd The 100.0 2.7E-35 5.8E-40 314.6 20.5 166 452-657 1-178 (178)
452 PRK10619 histidine/lysine/argi 100.0 2.1E-35 4.5E-40 334.5 20.8 200 450-664 4-241 (257)
453 PRK14237 phosphate transporter 100.0 3.6E-35 7.7E-40 334.0 22.7 204 450-664 19-251 (267)
454 PRK13632 cbiO cobalt transport 100.0 4E-35 8.6E-40 334.4 23.1 202 451-664 7-231 (271)
455 COG4559 ABC-type hemin transpo 100.0 2.1E-35 4.5E-40 301.9 18.4 212 1097-1321 2-231 (259)
456 PRK14248 phosphate ABC transpo 100.0 3.3E-35 7.1E-40 334.9 22.2 205 450-665 20-253 (268)
457 PRK11288 araG L-arabinose tran 100.0 1.9E-35 4.1E-40 366.3 21.9 207 1096-1315 4-224 (501)
458 PRK13539 cytochrome c biogenes 100.0 2.9E-35 6.2E-40 322.1 20.8 194 1096-1306 2-200 (207)
459 PRK10247 putative ABC transpor 100.0 2.6E-35 5.6E-40 326.8 20.6 196 451-660 7-223 (225)
460 PRK13633 cobalt transporter AT 100.0 4.1E-35 9E-40 335.6 23.0 203 451-665 4-234 (280)
461 cd03269 ABC_putative_ATPase Th 100.0 1.8E-35 3.8E-40 325.0 19.1 192 452-657 1-210 (210)
462 PRK14239 phosphate transporter 100.0 2.8E-35 6.1E-40 332.9 21.3 204 451-665 5-237 (252)
463 TIGR02211 LolD_lipo_ex lipopro 100.0 2.2E-35 4.8E-40 327.0 20.1 191 452-654 2-220 (221)
464 PRK14245 phosphate ABC transpo 100.0 2.2E-35 4.7E-40 333.1 20.3 204 451-665 3-235 (250)
465 PRK14259 phosphate ABC transpo 100.0 4.4E-35 9.5E-40 333.4 22.9 205 450-665 12-254 (269)
466 PRK11264 putative amino-acid A 100.0 5.8E-35 1.3E-39 329.9 23.4 200 451-665 3-234 (250)
467 PRK14268 phosphate ABC transpo 100.0 3.1E-35 6.6E-40 333.2 21.0 204 450-664 11-242 (258)
468 PRK11614 livF leucine/isoleuci 100.0 5.3E-35 1.1E-39 327.4 22.6 205 451-664 5-226 (237)
469 cd03264 ABC_drug_resistance_li 100.0 2E-35 4.4E-40 324.8 18.8 190 452-657 1-211 (211)
470 PRK11831 putative ABC transpor 100.0 2.9E-35 6.3E-40 335.1 20.8 200 451-665 7-234 (269)
471 PRK11231 fecE iron-dicitrate t 100.0 4.2E-35 9.1E-40 331.7 21.9 199 451-664 2-227 (255)
472 PRK14270 phosphate ABC transpo 100.0 4.1E-35 8.8E-40 331.1 21.7 204 451-665 4-236 (251)
473 PRK14240 phosphate transporter 100.0 4.7E-35 1E-39 330.5 22.2 203 451-664 3-234 (250)
474 PRK14249 phosphate ABC transpo 100.0 5E-35 1.1E-39 330.4 22.2 203 451-664 4-235 (251)
475 PRK14251 phosphate ABC transpo 100.0 3.4E-35 7.3E-40 331.9 20.8 204 451-665 4-236 (251)
476 PRK13648 cbiO cobalt transport 100.0 7E-35 1.5E-39 332.2 23.5 202 451-665 7-232 (269)
477 PRK11300 livG leucine/isoleuci 100.0 5.2E-35 1.1E-39 331.3 22.1 205 451-664 5-243 (255)
478 cd03223 ABCD_peroxisomal_ALDP 100.0 4.6E-35 1E-39 308.5 20.2 162 452-652 1-164 (166)
479 PRK10575 iron-hydroxamate tran 100.0 4.5E-35 9.6E-40 333.0 21.4 200 450-664 10-237 (265)
480 PRK10982 galactose/methyl gala 100.0 2.8E-35 6E-40 364.2 21.4 208 1099-1319 1-222 (491)
481 TIGR03411 urea_trans_UrtD urea 100.0 4.5E-35 9.7E-40 329.1 21.2 208 451-664 2-231 (242)
482 TIGR03410 urea_trans_UrtE urea 100.0 4E-35 8.7E-40 326.9 20.6 197 452-662 1-219 (230)
483 TIGR01189 ccmA heme ABC export 100.0 2.7E-35 5.9E-40 320.3 18.6 192 1097-1303 1-197 (198)
484 PRK14238 phosphate transporter 100.0 5.2E-35 1.1E-39 333.2 21.8 205 450-665 23-256 (271)
485 PRK10584 putative ABC transpor 100.0 5.3E-35 1.2E-39 325.5 21.4 194 451-656 6-227 (228)
486 PRK13652 cbiO cobalt transport 100.0 6.4E-35 1.4E-39 333.6 22.5 200 451-664 3-227 (277)
487 TIGR03415 ABC_choXWV_ATP choli 100.0 3.1E-35 6.8E-40 344.8 20.4 189 466-665 36-255 (382)
488 TIGR02769 nickel_nikE nickel i 100.0 6.2E-35 1.3E-39 331.9 22.3 205 451-666 2-242 (265)
489 PRK15079 oligopeptide ABC tran 100.0 4.5E-35 9.9E-40 340.6 21.6 206 450-666 7-253 (331)
490 COG0410 LivF ABC-type branched 100.0 4.4E-35 9.5E-40 307.2 19.2 207 451-665 3-227 (237)
491 PRK13548 hmuV hemin importer A 100.0 9.1E-35 2E-39 329.0 23.4 199 451-664 2-230 (258)
492 TIGR02324 CP_lyasePhnL phospho 100.0 3.2E-35 6.9E-40 326.4 19.4 199 1097-1305 2-223 (224)
493 TIGR02633 xylG D-xylose ABC tr 100.0 3.7E-35 8.1E-40 364.1 22.0 211 1097-1319 2-229 (500)
494 PRK10070 glycine betaine trans 100.0 3.1E-35 6.7E-40 347.4 20.2 187 468-665 42-255 (400)
495 PRK10895 lipopolysaccharide AB 100.0 4.4E-35 9.5E-40 328.9 20.5 203 451-664 3-226 (241)
496 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.2E-35 1.1E-39 321.6 20.6 189 452-657 1-211 (211)
497 cd03292 ABC_FtsE_transporter F 100.0 2.7E-35 5.8E-40 324.7 18.3 188 452-653 1-214 (214)
498 PRK14243 phosphate transporter 100.0 7.5E-35 1.6E-39 330.8 22.4 204 451-665 10-249 (264)
499 PRK11124 artP arginine transpo 100.0 6.4E-35 1.4E-39 327.8 21.5 202 451-663 2-229 (242)
500 TIGR02673 FtsE cell division A 100.0 2.8E-35 6.1E-40 324.5 18.2 187 452-652 2-214 (214)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.7e-261 Score=2454.81 Aligned_cols=1254 Identities=48% Similarity=0.775 Sum_probs=1159.7
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHhcCCCCCchHHHHHHHHHH
Q 000702 57 VTPYGDAGL--FSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAENPTKTPSLALAILKSFW 134 (1343)
Q Consensus 57 ~~~~~~a~~--~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~l~~~~~ 134 (1343)
++|.+.++. +|+++|||++|++++|||++|+.+|+|+++++|+++.+.++|++.|+++.++.. ++|+++++++++||
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~-~~psl~~al~~~f~ 200 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSG-KKPSLLRALLRTFG 200 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhcccc-CCcHHHHHHHHHHH
Confidence 455666666 999999999999999999999999999999999999999999999999875433 67899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 135 KEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAM 214 (1343)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 214 (1343)
+.+++.+++.++...+.+++|.+++.+++++++++...+.+|.++++++++.++++++.++|++...++|+|+|++|.++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~ 280 (1381)
T KOG0054|consen 201 RTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISA 280 (1381)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHH
Confidence 99999999999999999999999999999998875455679999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 215 VYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIATIISIVVTVP 294 (1343)
Q Consensus 215 i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~~~~~ 294 (1343)
||+|+|+++....++.++|+|+|+|++|++++.++..++|.+|.+|+|+++++++||..+|+++++|++++++++|++.+
T Consensus 281 IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~ 360 (1381)
T KOG0054|consen 281 IYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSF 360 (1381)
T ss_pred HHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 295 VAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFWSSPIFVAA 374 (1343)
Q Consensus 295 ~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (1343)
++++++++|++.|+.+|+|++.++|+|+|||+||+|+||+.|.++|++.|++|++.++|..+..++..++++..|.++++
T Consensus 361 ~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~ 440 (1381)
T KOG0054|consen 361 LAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSV 440 (1381)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcceEE
Q 000702 375 VTFGTSI-LLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNVAIQ 453 (1343)
Q Consensus 375 ~~f~~~~-~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 453 (1343)
++|++|. ..++.+|+..+|+++++|+.++.|+..+|..++.+.++++|++|+++||..+|.+++.....+....+..++
T Consensus 441 ~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 520 (1381)
T KOG0054|consen 441 VTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIE 520 (1381)
T ss_pred HHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEE
Confidence 9999999 668889999999999999999999999999999999999999999999999988765543223333456799
Q ss_pred EEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCeEEEEcccccccCccHHH
Q 000702 454 IENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGTAAYVSQSAWIQSGNIEE 533 (1343)
Q Consensus 454 ~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~~v~Q~~~l~~~ti~~ 533 (1343)
++|++|+|+++++.+.|+||||+|++|+++||||++||||||||.+|+||+++.+|++.++|.+|||||+||++||||||
T Consensus 521 i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvre 600 (1381)
T KOG0054|consen 521 IKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVRE 600 (1381)
T ss_pred EeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHH
Confidence 99999999986667799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH
Q 000702 534 NILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGS 613 (1343)
Q Consensus 534 Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~ 613 (1343)
||+||.|||+++|++|+++|+|++|++.||.||+|+|||+|.||||||||||+||||+|+|+|||+||||+||||+|+++
T Consensus 601 NILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~ 680 (1381)
T KOG0054|consen 601 NILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGK 680 (1381)
T ss_pred hhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCC
Q 000702 614 ELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDS 693 (1343)
Q Consensus 614 ~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1343)
|||++|+++.+++||+|+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++........+.. ...+ .
T Consensus 681 ~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~-~~~~----~ 755 (1381)
T KOG0054|consen 681 HIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQEEE-ASEK----D 755 (1381)
T ss_pred HHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhhccc-cccc----c
Confidence 9999999999999999999999999999999999999999999999999998888877632211110000 0000 0
Q ss_pred cccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhh
Q 000702 694 DENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAY 773 (1343)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~ 773 (1343)
.+. .. . ....+. +.. .......++.+..+....++.++|+++.|.++|++|+.|+++.+
T Consensus 756 ~~~---~~----~------~~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~ 814 (1381)
T KOG0054|consen 756 LES---GE----S------SRESES--RSL------ESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAG 814 (1381)
T ss_pred ccc---cc----c------ccchhh--hhh------hhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcc
Confidence 000 00 0 000000 000 00000000001111224556678888999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCC-CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 774 RGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPK-VNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLF 852 (1343)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 852 (1343)
++..+++++++.++.+++.++.++|+++|++........ .+..+|+++|.+++++..++.+++++++...+.++|++||
T Consensus 815 g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh 894 (1381)
T KOG0054|consen 815 GFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLH 894 (1381)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888889999999999999999999765322221 5678999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 853 VKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWM 932 (1343)
Q Consensus 853 ~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 932 (1343)
++|+++++|+||+|||+||+|||+||||+|++.+|..+|..+..++.+++.++++++++++++|+++++++|++++++++
T Consensus 895 ~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~ 974 (1381)
T KOG0054|consen 895 DKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFV 974 (1381)
T ss_pred HHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000702 933 QKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTF 1012 (1343)
Q Consensus 933 ~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1012 (1343)
++||++++||++|+++.+|||+++||+|++.|+.|||||+++++|.+++..++|.+.+++|....++||+++|+|+++++
T Consensus 975 ~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~ 1054 (1381)
T KOG0054|consen 975 QRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNL 1054 (1381)
T ss_pred HHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCC
Q 000702 1013 VFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWP 1092 (1343)
Q Consensus 1013 ~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp 1092 (1343)
++++++++++....+..+||.+|++++|++++++.++|++|+.+++|+.|+||||+.||.++|+|+|...+..+||++||
T Consensus 1055 ~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP 1134 (1381)
T KOG0054|consen 1055 VVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWP 1134 (1381)
T ss_pred HHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCC
Confidence 99999888887766558899999999999999999999999999999999999999999999999666665666999999
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhh
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRS 1172 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~ 1172 (1343)
++|.|+|+|+++||+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++++||+
T Consensus 1135 ~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRs 1214 (1381)
T KOG0054|consen 1135 SKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRS 1214 (1381)
T ss_pred CCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1173 RLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
++++|||||+||+||+|+||||+++|+|+|||+||++|+|+++|.++|+|||++|.|+|.|||.||||++||||||||++
T Consensus 1215 rlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~s 1294 (1381)
T KOG0054|consen 1215 RLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKS 1294 (1381)
T ss_pred cCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHH
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~ 1332 (1343)
||||||||||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.+
T Consensus 1295 kILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~ 1374 (1381)
T KOG0054|consen 1295 KILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKE 1374 (1381)
T ss_pred CEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hcccC
Q 000702 1333 YSSRS 1337 (1343)
Q Consensus 1333 ~~~~~ 1337 (1343)
...++
T Consensus 1375 ~~~~~ 1379 (1381)
T KOG0054|consen 1375 AALSS 1379 (1381)
T ss_pred HHHhh
Confidence 76554
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.7e-207 Score=2079.82 Aligned_cols=1251 Identities=37% Similarity=0.622 Sum_probs=1108.7
Q ss_pred cCCCCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHhcCCCCCchHHHHHHH
Q 000702 52 AGCLKVTPYGDAGLFSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAENPTKTPSLALAILK 131 (1343)
Q Consensus 52 ~~~~~~~~~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~l~~ 131 (1343)
+..++++||++||+|||++|+|++|++++||+++|+.+|||+|+++++++.+.++|++.|+++.+ ++++++++++++
T Consensus 221 ~~~~~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~~l~~~l~~ 297 (1622)
T PLN03130 221 PGGEQICPERHANIFSRIFFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEELK---KPKPWLLRALNN 297 (1622)
T ss_pred cccCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHhc---cCCchHHHHHHH
Confidence 44568899999999999999999999999999999999999999999999999999999998753 245899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 132 SFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSAL 211 (1343)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 211 (1343)
+|++.++.++++.++..++.+++|++++.+++++.+++ ....++.++++++++.++.+++.++|++...+++.++|..|
T Consensus 298 ~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 376 (1622)
T PLN03130 298 SLGGRFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTL 376 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997543 22346666666666666667777778888889999999999
Q ss_pred HHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 212 TAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIATIISIVV 291 (1343)
Q Consensus 212 ~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~~ 291 (1343)
+..+|+|+++++...+++.++|+++|+|++|++++.+++..+|.+|..|++++++++++|..+|++++++++++++++|+
T Consensus 377 ~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l 456 (1622)
T PLN03130 377 VAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPI 456 (1622)
T ss_pred HHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999998888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 292 TVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFWSSPIF 371 (1343)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~ 371 (1343)
+.++.+++++.+++.++.+|+|.+.++|+++||++||+|+||+.|.+++++.|++|++..++......+..++....|.+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~ 536 (1622)
T PLN03130 457 QTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVL 536 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888877777776777777
Q ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcce
Q 000702 372 VAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNVA 451 (1343)
Q Consensus 372 ~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~ 451 (1343)
+++++|++|.+.++.+|++.+|+++++++.+..|+..+|..+..+.++++|++||++|++.++....... +.......
T Consensus 537 v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~ 614 (1622)
T PLN03130 537 VTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPA 614 (1622)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCc
Confidence 8888999999999999999999999999999999999999999999999999999999987664321111 00111236
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCC-cEEEECCeEEEEcccccccCcc
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKIS-GEVRLCGTAAYVSQSAWIQSGN 530 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~-G~i~~~g~i~~v~Q~~~l~~~t 530 (1343)
|+++|++|+|+++.++++|+|+||+|++|++++|+||+|||||||+++|+|+++|++ |+|.++|+++||+|+||+|++|
T Consensus 615 I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngT 694 (1622)
T PLN03130 615 ISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNAT 694 (1622)
T ss_pred eEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCC
Confidence 999999999975445789999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 000702 531 IEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAH 610 (1343)
Q Consensus 531 i~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~ 610 (1343)
|||||+||.++|+++|++++++|+|++|++.||+||+|+|||+|.+|||||||||+||||+|++|+||||||||||||++
T Consensus 695 IreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~ 774 (1622)
T PLN03130 695 VRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAH 774 (1622)
T ss_pred HHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCCC
Q 000702 611 TGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSS 690 (1343)
Q Consensus 611 ~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1343)
++++++++++++.++++|+|+|||+++.++.||+|++|++|+++++|+|+|+++.++.+.++...+....+.. . +..
T Consensus 775 ~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~-~-~~~- 851 (1622)
T PLN03130 775 VGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYV-E-ENG- 851 (1622)
T ss_pred HHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccc-c-ccc-
Confidence 9999999999888899999999999999999999999999999999999999988777777765432111000 0 000
Q ss_pred CCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHH
Q 000702 691 EDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMA 770 (1343)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 770 (1343)
+..... ... . ............ .. ... +.....+..+.++|+++.|.++|++|+.|++
T Consensus 852 ~~~~~~----~~~--~---~~~~~~~~~~~~-----------~~-~~~-~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~ 909 (1622)
T PLN03130 852 EEEDDQ----TSS--K---PVANGNANNLKK-----------DS-SSK-KKSKEGKSVLIKQEERETGVVSWKVLERYKN 909 (1622)
T ss_pred cccccc----ccc--c---cccccccccccc-----------cc-ccc-ccccccchhhhhHHHHhcCccCHHHHHHHHH
Confidence 000000 000 0 000000000000 00 000 0000011224456778899999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 771 AAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQK 850 (1343)
Q Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 850 (1343)
+.++.+.+.+++++.++.+++.+++++|+++|.+.... .......|+++|++++++..++.+++.+++...+.+++++
T Consensus 910 ~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 987 (1622)
T PLN03130 910 ALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKR 987 (1622)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776666666667777888889999999999864321 1223456888899999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 851 LFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACL 930 (1343)
Q Consensus 851 l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~ 930 (1343)
+|.+++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++++++|..+++++|++++++
T Consensus 988 L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~ 1067 (1622)
T PLN03130 988 LHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFY 1067 (1622)
T ss_pred HHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999887788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 000702 931 WMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLS 1010 (1343)
Q Consensus 931 ~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~ 1010 (1343)
+++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+.+.+..|.+.+..+.....++|++.++++++
T Consensus 1068 ~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~ 1147 (1622)
T PLN03130 1068 GAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLG 1147 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCC
Q 000702 1011 TFVFAFCMVLLVSFPHGA-----IDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDS 1085 (1343)
Q Consensus 1011 ~~~~~~~~~~~~~~~~g~-----~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~ 1085 (1343)
++++.+.+.+.+.. .+. ..++.+|++++|++.+...+.++++.+..+|+.++|+||+.+|.+.|+|++...++.
T Consensus 1148 ~~~i~~~~~~~v~~-~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~ 1226 (1622)
T PLN03130 1148 GLMIWLTASFAVMQ-NGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENN 1226 (1622)
T ss_pred HHHHHHHHHHHHHc-ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCC
Confidence 87665555443332 221 226889999999999999999999999999999999999999999988865433344
Q ss_pred CCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC
Q 000702 1086 RPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI 1165 (1343)
Q Consensus 1086 ~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i 1165 (1343)
.+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|+|+|++|+|+|||+||+++
T Consensus 1227 ~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i 1306 (1622)
T PLN03130 1227 RPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKF 1306 (1622)
T ss_pred CCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccC
Confidence 56678999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++++||++|++|||||+||+||||+||||+++++|+|+|+||++++++++|.++|+||||+|+|+|.|||||||||||||
T Consensus 1307 ~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLA 1386 (1622)
T PLN03130 1307 GLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLA 1386 (1622)
T ss_pred CHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcH
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSM 1325 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~ 1325 (1343)
||||++|+|||||||||+||.+||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.
T Consensus 1387 RALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~ 1466 (1622)
T PLN03130 1387 RALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSA 1466 (1622)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987899
Q ss_pred HHHHHHHhccc
Q 000702 1326 FLKLVTEYSSR 1336 (1343)
Q Consensus 1326 f~~l~~~~~~~ 1336 (1343)
|++|+++++..
T Consensus 1467 f~~L~~~~~~~ 1477 (1622)
T PLN03130 1467 FSKMVQSTGAA 1477 (1622)
T ss_pred HHHHHHHcChh
Confidence 99999987653
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-203 Score=2042.64 Aligned_cols=1249 Identities=35% Similarity=0.593 Sum_probs=1104.1
Q ss_pred hcCCCCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHhcCCCCCchHHHHHH
Q 000702 51 EAGCLKVTPYGDAGLFSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAENPTKTPSLALAIL 130 (1343)
Q Consensus 51 ~~~~~~~~~~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~l~ 130 (1343)
.|.++.++||+++|+|||++|+|++|++++||+++|+.+|||+|+++++++.+.++|++.|+++.+ .++++++++++
T Consensus 220 ~~~~~~~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~---~~~~~l~~~l~ 296 (1495)
T PLN03232 220 LRGGENICPERYASIFSRIYFSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEESR---RPKPWLLRALN 296 (1495)
T ss_pred ccccCCCCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhhc---cCCchHHHHHH
Confidence 344578899999999999999999999999999999999999999999999999999999998753 24589999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 131 KSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSA 210 (1343)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 210 (1343)
++|++.++.+++++++..++.+++|++++.+++++++++ ....++.++++++++.++.+++.++|++...+++.++|..
T Consensus 297 ~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 375 (1495)
T PLN03232 297 NSLGGRFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGD-PAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRST 375 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997543 2345677777888888888888888888889999999999
Q ss_pred HHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 211 LTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIATIISIV 290 (1343)
Q Consensus 211 L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~ 290 (1343)
++..+|+|+++++...+++.++|+++|+|++|++++.+++..+|.+|..|++++++++++|..+|++++++++++++++|
T Consensus 376 l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~p 455 (1495)
T PLN03232 376 LVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIP 455 (1495)
T ss_pred HHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 291 VTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFWSSPI 370 (1343)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 370 (1343)
++.++++++++.+++.++.+|+|.+.++|+++||++||+|+||+.+.+++++.|++|++..++......+..++....|.
T Consensus 456 l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 535 (1495)
T PLN03232 456 LQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPV 535 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888777776666666777
Q ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcc
Q 000702 371 FVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNV 450 (1343)
Q Consensus 371 ~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~ 450 (1343)
++.+++|++|.+.++.+|++.+|+++++++.+..|+..+|..+..+.++++|++||++|++.++....... +......
T Consensus 536 ~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~ 613 (1495)
T PLN03232 536 VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAP 613 (1495)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCC
Confidence 77788999999999999999999999999999999999999999999999999999999987654221111 1111223
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcE-EEECCeEEEEcccccccCc
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGE-VRLCGTAAYVSQSAWIQSG 529 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~-i~~~g~i~~v~Q~~~l~~~ 529 (1343)
.|+++|++|+|++..++++|+|+||+|++||+++|+||+|||||||+++|+|+++|++|. +.+++.+|||+|+||+|++
T Consensus 614 ~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~g 693 (1495)
T PLN03232 614 AISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNA 693 (1495)
T ss_pred cEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccc
Confidence 699999999997544578999999999999999999999999999999999999999974 5678999999999999999
Q ss_pred cHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000702 530 NIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDA 609 (1343)
Q Consensus 530 ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~ 609 (1343)
||||||+||.++++++|++++++|+|.+|++.+|+||+|+|||+|.+|||||||||+||||+|++|+||||||||||||+
T Consensus 694 TIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~ 773 (1495)
T PLN03232 694 TVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDA 773 (1495)
T ss_pred cHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCC
Q 000702 610 HTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHS 689 (1343)
Q Consensus 610 ~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1343)
+++++++++++++.++++|+|+|||+++.++.||+|++|++|+++++|+|+|+++.++.|.++...+....+.. . ++
T Consensus 774 ~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~-~-~~- 850 (1495)
T PLN03232 774 HVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQ-E-VN- 850 (1495)
T ss_pred HHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccc-c-cc-
Confidence 99999999999888889999999999999999999999999999999999999988877777765432111000 0 00
Q ss_pred CCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHH
Q 000702 690 SEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYM 769 (1343)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 769 (1343)
...+... . . ......+..... . ... ......+....++|+++.|.++|++|+.|+
T Consensus 851 --~~~~~~~-------~-~--~~~~~~~~~~~~---------~---~~~-~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~ 905 (1495)
T PLN03232 851 --TNDENIL-------K-L--GPTVTIDVSERN---------L---GST-KQGKRGRSVLVKQEERETGIISWNVLMRYN 905 (1495)
T ss_pred --ccccccc-------c-c--cccccccccccc---------c---ccc-cccccchhhhhhHHHHhcCcccHHHHHHHH
Confidence 0000000 0 0 000000000000 0 000 000001122456778889999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 770 AAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQ 849 (1343)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~ 849 (1343)
++.++.+.+.+++++.++.++..+++++|+++|++.... ......+|+++|++++++..++.+++.+++...+.++++
T Consensus 906 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~ 983 (1495)
T PLN03232 906 KAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP--KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAK 983 (1495)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998776666666666777788888999999999864311 122356789999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 850 KLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVAC 929 (1343)
Q Consensus 850 ~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~ 929 (1343)
++|.+++++++++|++||+++|+|+++|||++|++.+|..++..+..++..++.+++.+++++++++..+++++|+.+++
T Consensus 984 ~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~ 1063 (1495)
T PLN03232 984 RLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILF 1063 (1495)
T ss_pred HHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888888887777778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 000702 930 LWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELL 1009 (1343)
Q Consensus 930 ~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~ 1009 (1343)
++++.+|.+++|+++|.+..+++|++++++|+++|+.|||+|+++++|.+++.+..|.+.+..+.....++|+..+++++
T Consensus 1064 ~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 1143 (1495)
T PLN03232 1064 YAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETL 1143 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCC
Q 000702 1010 STFVFAFCMVLLVSFPHGAI-----DPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIED 1084 (1343)
Q Consensus 1010 ~~~~~~~~~~~~~~~~~g~~-----~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~ 1084 (1343)
+++++.+.+.+.+.. .+.+ .++.+|++++|+..+..++.++++.+.+++..++|+||+.+|.+.|+|++...+.
T Consensus 1144 ~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~ 1222 (1495)
T PLN03232 1144 GGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIEN 1222 (1495)
T ss_pred HHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccC
Confidence 766555444333322 2222 2567888999999999999999999999999999999999999988876543233
Q ss_pred CCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC
Q 000702 1085 SRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST 1164 (1343)
Q Consensus 1085 ~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~ 1164 (1343)
..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||++
T Consensus 1223 ~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~ 1302 (1495)
T PLN03232 1223 NRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAK 1302 (1495)
T ss_pred CCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhh
Confidence 34566799999999999999998877789999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHH
Q 000702 1165 IGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSL 1244 (1343)
Q Consensus 1165 i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1244 (1343)
++++++|++|++|||||+||+||||+||||+++++|+|+|+||+++++++++.++|+||||+|+|+|.||||||||||||
T Consensus 1303 i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaL 1382 (1495)
T PLN03232 1303 FGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSL 1382 (1495)
T ss_pred CCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1245 GRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1245 ARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
||||+++|+|||||||||+||.+||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|
T Consensus 1383 ARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~ 1462 (1495)
T PLN03232 1383 ARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTS 1462 (1495)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998788
Q ss_pred HHHHHHHHhccc
Q 000702 1325 MFLKLVTEYSSR 1336 (1343)
Q Consensus 1325 ~f~~l~~~~~~~ 1336 (1343)
.|++|+++++..
T Consensus 1463 ~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1463 AFFRMVHSTGPA 1474 (1495)
T ss_pred HHHHHHHHhChh
Confidence 999999987654
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=6.6e-200 Score=2014.15 Aligned_cols=1273 Identities=36% Similarity=0.617 Sum_probs=1103.3
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHhc------------------
Q 000702 56 KVTPYGDAGLFSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAE------------------ 117 (1343)
Q Consensus 56 ~~~~~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~------------------ 117 (1343)
..+||++||++||++|+|++|++++||+++|+.+|||+++++++++.+.++|++.|+++.++
T Consensus 200 ~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 279 (1522)
T TIGR00957 200 NPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKP 279 (1522)
T ss_pred CCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccc
Confidence 46899999999999999999999999999999999999999999999999999999876311
Q ss_pred --------------------CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHH
Q 000702 118 --------------------NPTKTPSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYI 177 (1343)
Q Consensus 118 --------------------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~ 177 (1343)
++.++++++++++++||+.++..++++++..++.+++|++++.+++++.++......+|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~ 359 (1522)
T TIGR00957 280 KGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYF 359 (1522)
T ss_pred cccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHH
Confidence 012347899999999999999999999999999999999999999998765433345788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 178 LAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIW 257 (1343)
Q Consensus 178 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~ 257 (1343)
++++++++.++.+++.++|++...+++.++|..|+..+|+|+++++....++.++|+++|+|++|++++.++..++|.+|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~ 439 (1522)
T TIGR00957 360 YTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIW 439 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88888888889999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHH
Q 000702 258 MLPLQIILALAILYKNVGIASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYR 337 (1343)
Q Consensus 258 ~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~ 337 (1343)
..|++++++++++|..+|++++++++++++++|++.++++++++.++++++.+|+|++.++|+++|||.||+|+||+.|.
T Consensus 440 ~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~ 519 (1522)
T TIGR00957 440 SAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFL 519 (1522)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 338 IQLEEMRGVEFRWLRKALYSQAFITFIFWSSPIFVAAVTFGTSILL--GAQLTAGSVLSAMATFRILQEPLRNFPDLVSM 415 (1343)
Q Consensus 338 ~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~ 415 (1343)
+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+. ++.++++.+|+++++++.+..|+..+|..+..
T Consensus 520 ~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~ 599 (1522)
T TIGR00957 520 DKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISS 599 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888877777777778888888889888876 46799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccccccccccC-CCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHH
Q 000702 416 MAQTKVSLDRISGFLQEEELQEDATIVLP-RGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKS 494 (1343)
Q Consensus 416 ~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~-~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKS 494 (1343)
+.++++|++||++|++.++.++....... .......++++|++|+|+. .++++|+|+||++++|++++|+||||||||
T Consensus 600 ~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~~GsGKS 678 (1522)
T TIGR00957 600 IVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQVGCGKS 678 (1522)
T ss_pred HHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 99999999999999987654332111101 0111236999999999963 345799999999999999999999999999
Q ss_pred HHHHHHhcCccCCCcEEEECCeEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCC
Q 000702 495 SLLSCILGEIPKISGEVRLCGTAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRG 574 (1343)
Q Consensus 495 TLl~~l~g~~~~~~G~i~~~g~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g 574 (1343)
||+++|+|+++|++|+|.++|.++||+|+||++++||+|||.||.++++++|++++++|++.+|++.+|+||+|.+|++|
T Consensus 679 TLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g 758 (1522)
T TIGR00957 679 SLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKG 758 (1522)
T ss_pred HHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH--HhcCCcEEEEEecCCCccccCCEEEEEeCCe
Q 000702 575 INLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIM--TALANKTVIFVTHQVEFLPAADFILVLKEGR 652 (1343)
Q Consensus 575 ~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~--~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~ 652 (1343)
.+|||||||||+||||+|++|+++|||||||+||+++++++++.++. +..+++|+|+|||+++.++.||+|++|++|+
T Consensus 759 ~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~ 838 (1522)
T TIGR00957 759 VNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGK 838 (1522)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCe
Confidence 99999999999999999999999999999999999999999998873 4567899999999999999999999999999
Q ss_pred EEEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCC-CCCCCcccccccCcccCC--CcCCCCCCCCcc-cccccccCCc
Q 000702 653 IIQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNH-SSEDSDENLTLDGCVIPC--KKCDASGDNIDN-LAKEVQDGSS 728 (1343)
Q Consensus 653 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~ 728 (1343)
++++|+++++.+..+.+.++...+....+.....+. ......+.. +....+. ............ ..........
T Consensus 839 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (1522)
T TIGR00957 839 ISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTALVSGEGK--EAKLIENGMLVTDVVGKQLQRQLSASSSDSGD 916 (1522)
T ss_pred EEeeCCHHHHHhcchhHHHHHHhhcccccccccccccccccccccc--ccccccccccccccccchhhhhcccccccccc
Confidence 999999999998777777766433211100000000 000000000 0000000 000000000000 0000000000
Q ss_pred hhHHH-HHHH-HHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCC
Q 000702 729 ASEQK-AIKE-KKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQT 806 (1343)
Q Consensus 729 ~~~~~-~~~~-~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 806 (1343)
..... ...+ .............++|++..|.+++++|+.|+++.|.. .+++++++.++.+++.++.++|+++|.+..
T Consensus 917 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~ 995 (1522)
T TIGR00957 917 QSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWDYMKAIGLF-ITFLSIFLFVCNHVSALASNYWLSLWTDDP 995 (1522)
T ss_pred ccccccccccccccccccchhhhHHHHHHhcCcccHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00000 0000 00000001123456677888999999999999998654 333444555677788889999999998643
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhh
Q 000702 807 EGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVV 886 (1343)
Q Consensus 807 ~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~i 886 (1343)
....+......|+++|++++++..++.+++.++....+.++++++|++++++++++|++||+++|+|+|+|||++|++.+
T Consensus 996 ~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~i 1075 (1522)
T TIGR00957 996 MVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTV 1075 (1522)
T ss_pred cccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHH
Confidence 21112233456788999999988888888888889999999999999999999999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccch
Q 000702 887 DLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAS 966 (1343)
Q Consensus 887 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~ 966 (1343)
|..++..+..++..++.+++.++++++.+|+++++++|+++++++++++|.+++|+++|++..+++|+++++.|+++|+.
T Consensus 1076 d~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~ 1155 (1522)
T TIGR00957 1076 DSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVS 1155 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcH
Confidence 99999999999999999999999999999988888888888888999999999999999999999999999999999999
Q ss_pred heeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 000702 967 TIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNA 1046 (1343)
Q Consensus 967 tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~ 1046 (1343)
|||+|+++++|.+++.+..|.+.++.+.....++|+..++++++.+++.+++.+.+ ...+.+++|.+|++++|+..+..
T Consensus 1156 tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~ 1234 (1522)
T TIGR00957 1156 VIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTF 1234 (1522)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988765544443333 33567999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCE
Q 000702 1047 RLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKK 1126 (1343)
Q Consensus 1047 ~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~Gek 1126 (1343)
++.++++.+.++|+.++|+||+.+|.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++||+||||+|+||||
T Consensus 1235 ~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~Gek 1314 (1522)
T TIGR00957 1235 YLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEK 1314 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCE
Confidence 99999999999999999999999999888776433233455668999999999999999988777899999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHH
Q 000702 1127 IGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEA 1206 (1343)
Q Consensus 1127 vgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~a 1206 (1343)
||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+|+|+|
T Consensus 1315 iaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~a 1394 (1522)
T TIGR00957 1315 VGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWA 1394 (1522)
T ss_pred EEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 000702 1207 LDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVC 1286 (1343)
Q Consensus 1207 L~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI 1286 (1343)
|++|+++++|.++|+||||+|+|+|.|||||||||||||||||++|+|||||||||+||.+||+.||++|++.+++||||
T Consensus 1395 l~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI 1474 (1522)
T TIGR00957 1395 LELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVL 1474 (1522)
T ss_pred HHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1287 TIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1287 ~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
+||||++|+.+||||+|||+|+|+|+|+|+||+++ +|.|++|+++++
T Consensus 1475 ~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1475 TIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFYSMAKDAG 1521 (1522)
T ss_pred EEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHHHHHHHcC
Confidence 99999999999999999999999999999999986 699999999853
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.1e-195 Score=1960.57 Aligned_cols=1270 Identities=27% Similarity=0.483 Sum_probs=1089.1
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHhcCCCCCchHHHHHHHHHHH
Q 000702 56 KVTPYGDAGLFSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKAENPTKTPSLALAILKSFWK 135 (1343)
Q Consensus 56 ~~~~~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~l~~~~~~ 135 (1343)
+.+||++||+|||++|+|++|++++||+++|+.+|||+|+++++++.+.++|++.|+++.++ ..++++|+++++++|++
T Consensus 2 ~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~-~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 2 QRSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELAS-AKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhc-cCCCChHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999886532 23568999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 136 EAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETF-PHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAM 214 (1343)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 214 (1343)
.+++.++++++.+++.+++|++++.+|++++..... ...++.++++++++.++.+++.++++|...++++++|.+|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998543221 2357888888888999999999989999999999999999999
Q ss_pred HHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 215 VYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIATIISIVVTVP 294 (1343)
Q Consensus 215 i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~~~~~ 294 (1343)
+|+|+++++....++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||+.+|++++++++++++++|++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 295 VAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFWSSPIFVAA 374 (1343)
Q Consensus 295 ~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (1343)
+++++.++++++++..|+|++.++|+++|||+||+|+||+.|.+++++.|+.|++..++..+...+...+++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888777777777788888889
Q ss_pred HHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcceEE
Q 000702 375 VTFGTSILLGAQLTAGSVLSAMATFRILQEPLR-NFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNVAIQ 453 (1343)
Q Consensus 375 ~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~-~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~ 453 (1343)
++|++|.+.++ ++++.+|+++++++.+..|+. .+|..+..+.++.+|++||++||..++.+.... ......++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~-----~~~~~~i~ 394 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY-----NLTTTEVE 394 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc-----cCCCCceE
Confidence 99999988754 789999999999999999985 799999999999999999999998876532211 01123589
Q ss_pred EEeeEEEecCC-------------------------------CCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhc
Q 000702 454 IENAEFCWYPS-------------------------------SSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILG 502 (1343)
Q Consensus 454 ~~~~~f~~~~~-------------------------------~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g 502 (1343)
++|++|.|+.. ..+++|+|+||+|++|++++|+||||||||||+++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999531 02468999999999999999999999999999999999
Q ss_pred CccCCCcEEEECCeEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 503 EIPKISGEVRLCGTAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 503 ~~~~~~G~i~~~g~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
+++|++|+|.++|.++||+|+||++++||+|||+||.++++++|++++++|+|.+|++.+|+||+|.+|++|.+||||||
T Consensus 475 ~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 475 ELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
|||+||||+|++|++|||||||||||+++++++++.++.+..+++|+|+|||+++.++.||+|++|++|++++.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888777789999999999999989999999999999999999999
Q ss_pred HhcCccHHHHHHHHHHhh--------------------h--h-----c-C-------CCCCCCC----------------
Q 000702 663 LQAGTDFNALVSAHHEAI--------------------E--A-----M-D-------IPNHSSE---------------- 691 (1343)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~--------------------~--~-----~-~-------~~~~~~~---------------- 691 (1343)
.+....+........... + . . + +..+..+
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1490)
T TIGR01271 635 QAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARK 714 (1490)
T ss_pred HhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 876555554442100000 0 0 0 0 0000000
Q ss_pred --------------CCcccc-----------ccc--Cc-ccC-----------------------CC--cCCC-CCCCCc
Q 000702 692 --------------DSDENL-----------TLD--GC-VIP-----------------------CK--KCDA-SGDNID 717 (1343)
Q Consensus 692 --------------~~~~~~-----------~~~--~~-~~~-----------------------~~--~~~~-~~~~~~ 717 (1343)
...... +.+ .. ..+ .. .... .....+
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1490)
T TIGR01271 715 FSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQT 794 (1490)
T ss_pred cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 000000 000 00 000 00 0000 000000
Q ss_pred cccc-----cc---ccCCc---hh-HHHH--HHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHH
Q 000702 718 NLAK-----EV---QDGSS---AS-EQKA--IKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIIL 783 (1343)
Q Consensus 718 ~~~~-----~~---~~~~~---~~-~~~~--~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~ 783 (1343)
...+ +. ..... .. ..+. ..............+.++|++..|.++|++|+.|+++.+++..+.++++
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~ 874 (1490)
T TIGR01271 795 SFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCL 874 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHH
Confidence 0000 00 00000 00 0000 0000000011122356678888999999999999999876555555566
Q ss_pred HHHHHHHHHHHhhhhhhhcCCCC------CCCCC-----------CCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 784 AQVLFQFLQIASNWWMAWANPQT------EGDQP-----------KVNPMVL-LVVYMALAFGSSWFIFVRAVLVATFGL 845 (1343)
Q Consensus 784 ~~~~~~~~~~~~~~~l~~~~~~~------~~~~~-----------~~~~~~~-l~~y~~l~~~~~~~~~~~~~~~~~~~~ 845 (1343)
+.++.+++..+.++|+.+|.+.. ..... .....+| +++|+++.++..++.+++.+++...+.
T Consensus 875 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1490)
T TIGR01271 875 VIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLL 954 (1490)
T ss_pred HHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66778899999999998775411 00000 0011223 556666665666778889999999999
Q ss_pred HHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 846 AAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPM 925 (1343)
Q Consensus 846 ~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~ 925 (1343)
++++++|.+++++++++|++||+++|+|+++|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+
T Consensus 955 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l 1034 (1490)
T TIGR01271 955 TVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPV 1034 (1490)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 000702 926 AVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLR 1005 (1343)
Q Consensus 926 ~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 1005 (1343)
++++++++++|.+.+|+++|++..+++|+++|+.|++.|+.|||+|+++++|.+++.+..|.+.+.++.....++|+..+
T Consensus 1035 ~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1114 (1490)
T TIGR01271 1035 AVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMR 1114 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCC--
Q 000702 1006 MELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIE-- 1083 (1343)
Q Consensus 1006 l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~-- 1083 (1343)
+++++.+.+.+++++.+. ...+++|.+|++++|++.+...+.++++.+.+++..+.|+||+.+|.+.|+|.+...+
T Consensus 1115 ~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~ 1192 (1490)
T TIGR01271 1115 IDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGG 1192 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 999877554443333322 2235778899999999999999999999999999999999999999988877542111
Q ss_pred ------------CCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC
Q 000702 1084 ------------DSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA 1151 (1343)
Q Consensus 1084 ------------~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~ 1151 (1343)
...+|+.||..|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++ .
T Consensus 1193 ~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~ 1271 (1490)
T TIGR01271 1193 GKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-T 1271 (1490)
T ss_pred cccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C
Confidence 112455799999999999999999877889999999999999999999999999999999999998 7
Q ss_pred cceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCC
Q 000702 1152 CGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENG 1231 (1343)
Q Consensus 1152 ~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1231 (1343)
+|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||++++|++++.++|+||||+|+|+|
T Consensus 1272 ~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G 1351 (1490)
T TIGR01271 1272 EGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGG 1351 (1490)
T ss_pred CcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEee
Q 000702 1232 DNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1232 ~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive 1311 (1343)
.|||||||||||||||||++|+|||||||||+||.+||+.||++|++.+++||||+||||++++.+||||+||++|+|+|
T Consensus 1352 ~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE 1431 (1490)
T TIGR01271 1352 YVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQ 1431 (1490)
T ss_pred CcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhhcCCcHHHHHHHHhccc
Q 000702 1312 FDTPGRLLEDKSSMFLKLVTEYSSR 1336 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~~f~~l~~~~~~~ 1336 (1343)
+|+|++|++ ++|.|++|++++..+
T Consensus 1432 ~g~p~~Ll~-~~~~f~~l~~~~~~~ 1455 (1490)
T TIGR01271 1432 YDSIQKLLN-ETSLFKQAMSAADRL 1455 (1490)
T ss_pred eCCHHHHHc-CCcHHHHHHHHhChh
Confidence 999999997 589999999987544
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.1e-186 Score=1874.68 Aligned_cols=1256 Identities=29% Similarity=0.484 Sum_probs=1077.9
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHHHHHhHh-------------------
Q 000702 56 KVTPYGDAGLFSLVTLSWLNPLLSIGAKRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKA------------------- 116 (1343)
Q Consensus 56 ~~~~~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~------------------- 116 (1343)
.+.||+++|||.++++.|++|++..+.|..|+++|||+...+.++.++.-++.+..++...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4579999999999999999999999999999999999999999886666555443322100
Q ss_pred ------------------------------c-------------------------------------------------
Q 000702 117 ------------------------------E------------------------------------------------- 117 (1343)
Q Consensus 117 ------------------------------~------------------------------------------------- 117 (1343)
.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ---------CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHH
Q 000702 118 ---------NPTKTPSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLV 188 (1343)
Q Consensus 118 ---------~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~ 188 (1343)
..++..+++++++++||+.++..++++++.+++.+++|++++.+++++++++.....+++++++++++.++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 00223479999999999999999999999999999999999999999976543223467778888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 189 ETITTRQWYLGVDILGMHVRSALTAMVYRKGLKLSSLAKQ--SHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILA 266 (1343)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~ir~~L~~~i~~K~l~l~~~~~~--~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~ 266 (1343)
.+++.+++++...+.+.++|.+|...+|+|+++++..... +.++|+++|+|++|++++.+++.++|.+|..|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987665 56899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHH
Q 000702 267 LAILYKNVGIASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGV 346 (1343)
Q Consensus 267 ~~~l~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~ 346 (1343)
+++||..+|+++++|++++++++|++.++++++.++++++++.+|+|++.++|+++|||+||+++||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 347 EFRWLRKALYSQAFITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRI 426 (1343)
Q Consensus 347 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri 426 (1343)
|++.+++......+..++.+..|.++.+++|++|.+.++.||++.+|+++++|+.++.|+..+|..+..+.++.+|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccc------cc-----------c----------------ccC-------------------------CCCC
Q 000702 427 SGFLQEEELQED------AT-----------I----------------VLP-------------------------RGMT 448 (1343)
Q Consensus 427 ~~fl~~~e~~~~------~~-----------~----------------~~~-------------------------~~~~ 448 (1343)
++||+.+|.... .. . ..+ ....
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 999987652100 00 0 000 0000
Q ss_pred cceEEEEeeEEEecC-------------------------------------CCCCCccccceeEecCCeEEEEEcCCCC
Q 000702 449 NVAIQIENAEFCWYP-------------------------------------SSSRPTLSGISMKVDRGMRVAVCGMVGS 491 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~-------------------------------------~~~~~~l~~i~l~i~~G~~~~ivG~~Gs 491 (1343)
.+.+.++|++|.|+. ..++++|+|+||+|++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 123566777766431 0235689999999999999999999999
Q ss_pred CHHHHHHHHhcCccCCCcEEEECCeEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccC
Q 000702 492 GKSSLLSCILGEIPKISGEVRLCGTAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIG 571 (1343)
Q Consensus 492 GKSTLl~~l~g~~~~~~G~i~~~g~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig 571 (1343)
|||||+++|+|+++|++|+|.+++.++||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|+|++|.+|
T Consensus 698 GKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~ 777 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIG 777 (1560)
T ss_pred cHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhc
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCC
Q 000702 572 DRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEG 651 (1343)
Q Consensus 572 ~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G 651 (1343)
++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+.++|+|+|+|||+++.++.||+|++|++|
T Consensus 778 ~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G 857 (1560)
T PTZ00243 778 EKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDG 857 (1560)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999998877667899999999999999999999999999
Q ss_pred eEEEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhH
Q 000702 652 RIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASE 731 (1343)
Q Consensus 652 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1343)
+++++|+++++++.+ .+..+........+.. +.. ...+.. ...... ......... ... ... .
T Consensus 858 ~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~---~~~---~~~~~~--~~~~~~----~~~~~~~~~-~~~--~~~--~ 919 (1560)
T PTZ00243 858 RVEFSGSSADFMRTS-LYATLAAELKENKDSK---EGD---ADAEVA--EVDAAP----GGAVDHEPP-VAK--QEG--N 919 (1560)
T ss_pred EEEEecCHHHHHhCh-HHHHHHHhhccccccc---ccc---cccccc--cccccc----ccccccccc-ccc--ccc--c
Confidence 999999999998653 3444433211100000 000 000000 000000 000000000 000 000 0
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCC
Q 000702 732 QKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQP 811 (1343)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 811 (1343)
.+. .+. .........+..+|++..|.++|++|+.|+++.|+...+.+++++.++.+++..+.++|+++|++...
T Consensus 920 ~~~-~~~-~~~~~~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~---- 993 (1560)
T PTZ00243 920 AEG-GDG-AALDAAAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF---- 993 (1560)
T ss_pred ccc-ccc-cccccccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence 000 000 00011123455667788899999999999999877665555555666777888899999999885321
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccch
Q 000702 812 KVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIP 891 (1343)
Q Consensus 812 ~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~ 891 (1343)
......|+++|+++.++..++.+++.+.....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++
T Consensus 994 ~~~~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~ 1073 (1560)
T PTZ00243 994 KLSAATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLP 1073 (1560)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHH
Confidence 22345678888888887777777888877888889999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeec
Q 000702 892 FRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGF 971 (1343)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf 971 (1343)
..+..++..++.+++.++++++.+|.++++++|++++++++.++|.+..|+++|.+..+++|++++++|++.|+.|||+|
T Consensus 1074 ~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf 1153 (1560)
T PTZ00243 1074 MSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAY 1153 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhC
Confidence 99999999999999999999999998887888888888889999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHH
Q 000702 972 GQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLV---SFPHGAIDPSMAGLAVTYGLNLNARL 1048 (1343)
Q Consensus 972 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~---~~~~g~~~~~~~gl~l~~~~~~~~~l 1048 (1343)
++++.+.+++.+..|.+.++.+.....++|+..++++++.++.++++++.+ ....+.+++|.++++++|+.++..++
T Consensus 1154 ~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l 1233 (1560)
T PTZ00243 1154 GKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATL 1233 (1560)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988765444333322 22344578999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhc-CCCCCCCCC-----------------------CCCCCC---CCCCCCceEEEEE
Q 000702 1049 SRWILSFCKLENKIISIERIYQYSQ-IPGEAPPVI-----------------------EDSRPP---SSWPENGTIELID 1101 (1343)
Q Consensus 1049 ~~~~~~~~~~e~~~~s~eRi~~~~~-~~~e~~~~~-----------------------~~~~~~---~~wp~~g~I~f~n 1101 (1343)
.++++.+.+++..|+|+||+.+|.+ .|+|+.... +...++ +.||..|.|+|+|
T Consensus 1234 ~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~n 1313 (1560)
T PTZ00243 1234 NWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEG 1313 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEE
Confidence 9999999999999999999999996 444321100 011122 2355779999999
Q ss_pred EEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCc
Q 000702 1102 LKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDP 1181 (1343)
Q Consensus 1102 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp 1181 (1343)
|+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||
T Consensus 1314 Vsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp 1393 (1560)
T PTZ00243 1314 VQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDP 1393 (1560)
T ss_pred EEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCC
Confidence 99999887778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcC-CCEEEEeCC
Q 000702 1182 NLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQ-ARILVLDEA 1260 (1343)
Q Consensus 1182 ~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~-~~ILlLDEa 1260 (1343)
+||+||||+||||+++++|+|||+||++++++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||
T Consensus 1394 ~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEA 1473 (1560)
T PTZ00243 1394 VLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEA 1473 (1560)
T ss_pred ccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999996 899999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcc
Q 000702 1261 TASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1261 Ts~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
||+||.+||+.||++|++.+++||+|+||||++|+.+||||+|||+|+|+|+|+|+||+++++|.|++|+++++.
T Consensus 1474 TSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~ 1548 (1560)
T PTZ00243 1474 TANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGR 1548 (1560)
T ss_pred CccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhCh
Confidence 999999999999999999999999999999999999999999999999999999999998888999999988764
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.6e-151 Score=1407.13 Aligned_cols=1097 Identities=22% Similarity=0.293 Sum_probs=833.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 202 ILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVA 280 (1343)
Q Consensus 202 ~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~ 280 (1343)
+.|.|.-..+|...++.+||.....++.+.+|++.+.|+.|++++++.+. -+..++.....++.++++-+..-+..+++
T Consensus 97 ~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~Ltlv 176 (1228)
T KOG0055|consen 97 RTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWKLTLV 176 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666777777888888999999999999999999999998753 33344444444555555555555566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 281 TLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF 360 (1343)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 360 (1343)
++.+.+++......+++.+.+...+.++...+--+...|++.+||++-.|+-|+...++..+.-+.-.+.-.+......+
T Consensus 177 ~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~~g~~~G~ 256 (1228)
T KOG0055|consen 177 MLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIKKGLFKGL 256 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888888899888998888888889999999999999999999999887776665444433433333333332
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 000702 361 ITFI--FWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQED 438 (1343)
Q Consensus 361 ~~~~--~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~ 438 (1343)
...+ ++........++||..++..+..++|.+++++...-.-...+......+..+..|++|..+|.+.++.....+.
T Consensus 257 ~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~ 336 (1228)
T KOG0055|consen 257 GLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDP 336 (1228)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhcCCCCCCc
Confidence 2211 22333445567888888888889999988877665555667778888899999999999999999976543322
Q ss_pred cc-cccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--
Q 000702 439 AT-IVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-- 515 (1343)
Q Consensus 439 ~~-~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-- 515 (1343)
.. .........+.|+++||+|+||..++.++|+|+||+|++|+.+|+||+|||||||++++|.|+|+|++|+|.+||
T Consensus 337 ~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~d 416 (1228)
T KOG0055|consen 337 YSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGED 416 (1228)
T ss_pred ccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCcc
Confidence 11 111222345689999999999987778999999999999999999999999999999999999999999999998
Q ss_pred -----------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 516 -----------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 -----------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
+||.|.|+|.+|++||+|||.||+| .+.++..++.+.+..++.+..+|+|++|.+||+|..|||||||
T Consensus 417 i~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQ 496 (1228)
T KOG0055|consen 417 IRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQ 496 (1228)
T ss_pred chhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHH
Confidence 4899999999999999999999996 4678888888888899999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
||||||||.++|+||||||||||||++++ ++.+++++...+|+|.|+|+||++++++||+|++|++|+|+|.|+|+||+
T Consensus 497 RIAIARalv~~P~ILLLDEaTSaLD~~se-~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi 575 (1228)
T KOG0055|consen 497 RIAIARALVRNPKILLLDEATSALDAESE-RVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELI 575 (1228)
T ss_pred HHHHHHHHHhCCCEEEecCcccccCHHHH-HHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEecCHHHHH
Confidence 99999999999999999999999999985 55688899999999999999999999999999999999999999999999
Q ss_pred hcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhh
Q 000702 664 QAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKR 743 (1343)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (1343)
+.++.|.++++.+....+..+.+++. +..+.. ..+.... . ........ . ......... ...+
T Consensus 576 ~~~G~Y~~lv~~Q~~~~~~~~~~~~~--~~~~~~--~~s~~~s-----~--~~~~~~~~-----~-~~~~~~~~~-~~~e 637 (1228)
T KOG0055|consen 576 ALGGIYSSLVRLQELEKAAEDEEEEE--SLKEER--SRSLKSS-----S--SSPSLSRG-----S-NRSNLLSVK-PEGE 637 (1228)
T ss_pred hccchHHHHHHHHhhhhhhhcccccc--chhhhh--hhccccc-----c--ccccccCC-----c-ccccccccc-cccc
Confidence 99999999998775443221100000 000000 0000000 0 00000000 0 000000000 0000
Q ss_pred hhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHH----HHHHHHhhhhhhhcCCCCCCCCCCCChhHHH
Q 000702 744 SRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLF----QFLQIASNWWMAWANPQTEGDQPKVNPMVLL 819 (1343)
Q Consensus 744 ~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 819 (1343)
...... .++. -..++.....+.+. .|.+..+-.++.++. .+........+....... .+.-......|.
T Consensus 638 ~~~~~~-~~~~---~~~s~~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~-~~~~~~~~~~~a 710 (1228)
T KOG0055|consen 638 DPEEPV-SEED---EKVSFWRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPD-DDELKREVRAWA 710 (1228)
T ss_pred cccccc-cccc---ccccHHHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCC-hHHHHHHHHHHH
Confidence 000000 0011 11222222222222 111111111111111 111121222222111000 000111233588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc--cChhhhHHHHhhhhhhhcccchhhHHHH
Q 000702 820 VVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDS--TPAGRILNRVSIDQSVVDLDIPFRLGGF 897 (1343)
Q Consensus 820 ~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~--~~~G~ilnR~s~D~~~id~~l~~~~~~~ 897 (1343)
.+|++++++..++.+++.+++...+.+...++|..+++++++.++.|||. +. |++.+|+.+|...+...+...+..+
T Consensus 711 l~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~v 789 (1228)
T KOG0055|consen 711 LIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLV 789 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999995 45 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcH
Q 000702 898 ASTTIQLVGIIGVMTMVTWQVLLLV---IPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQE 974 (1343)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~---ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~ 974 (1343)
++++..++..+++.++++|.+.+++ .|++++..+++.+++.... +.+............|++.+++||++|+.|
T Consensus 790 v~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~---~~~~~~~~ea~~iA~eai~NIrTV~al~~e 866 (1228)
T KOG0055|consen 790 VQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFS---KDDKKAYEEASKIAIEAVSNIRTVAALCAE 866 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhHHHHHHHhhH
Confidence 9999999999999999999987765 4555555555555444322 222223333455778999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 000702 975 KRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL----LVSFPHGAIDPSMAGLAVTYGLNLNARLSR 1050 (1343)
Q Consensus 975 ~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~----~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~ 1050 (1343)
++|.+.+.+.++...+..+... .|-++-..+-..++++.-++. ..+...|.+++..+-..+.....-...+..
T Consensus 867 ~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~ 943 (1228)
T KOG0055|consen 867 EKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQ 943 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998887766554432 233333333222222222111 334557778877655444333333344555
Q ss_pred HHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCC-CcccccceeEecCCCEEEE
Q 000702 1051 WILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENL-PLVLHGITCAFPGGKKIGI 1129 (1343)
Q Consensus 1051 ~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~is~~I~~GekvgI 1129 (1343)
......++-....|+.++++..+.+++-+...+.. ....+.+|+|+|+||+|+|+..+ .+||+|+||+|++||.+|+
T Consensus 944 ~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~--~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvAL 1021 (1228)
T KOG0055|consen 944 ASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSG--GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVAL 1021 (1228)
T ss_pred HHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCC--CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEE
Confidence 56667788888999999999998665322211111 11113589999999999997432 3699999999999999999
Q ss_pred EcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHH
Q 000702 1130 VGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALD 1208 (1343)
Q Consensus 1130 VGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~ 1208 (1343)
||||||||||++.+|.|+|+|.+|.|.|||+||++++++.||++|++|.|+|.||++||||||.++ .+.+.+||.+|++
T Consensus 1022 VG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak 1101 (1228)
T KOG0055|consen 1022 VGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAK 1101 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988 4579999999999
Q ss_pred HcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 000702 1209 KSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTI 1288 (1343)
Q Consensus 1209 ~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~I 1288 (1343)
.++.|+||.++|+||||.|||+|.+||||||||+|||||++|||||||||||||+||.++|+.+|++|++...++|.|+|
T Consensus 1102 ~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvI 1181 (1228)
T KOG0055|consen 1102 LANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVI 1181 (1228)
T ss_pred HhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1289 AHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1289 aHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
||||+||++||.|.|+++|+|+|.|||++|++ ++|.|++|++.+.
T Consensus 1182 AHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1182 AHRLSTIQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQS 1226 (1228)
T ss_pred ecchhhhhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhcc
Confidence 99999999999999999999999999999998 7899999998764
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.6e-141 Score=1420.63 Aligned_cols=1193 Identities=17% Similarity=0.180 Sum_probs=868.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 130 LKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRS 209 (1343)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~ 209 (1343)
.+.+++.++++.++.++..++..+.|++++.+++.+..... ...+++.++++.++..++.....+...+++.++..
T Consensus 55 ~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 130 (1466)
T PTZ00265 55 PASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN----VNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILK 130 (1466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788888899999999999999999999997642211 11122233333344445555556667788999999
Q ss_pred HHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 210 ALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIATIIS 288 (1343)
Q Consensus 210 ~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~ 288 (1343)
.++..+|+|+++++..++++.+.|++++.++.|++.+.+.+. .+..+...++.++.++++++..-+..+++.+++++++
T Consensus 131 ~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~ 210 (1466)
T PTZ00265 131 TLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLI 210 (1466)
T ss_pred HHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988653 5666666777777777666655555556666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000702 289 IVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFW-- 366 (1343)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~-- 366 (1343)
+.+..++.+++++..++..+..++..+.+.|.++||++||.|+.|+.+.+++++..+...+...+......+...+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 290 (1466)
T PTZ00265 211 YICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGF 290 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888888888888888888899999999999999999999999998888876544433333333333332221111
Q ss_pred HHHHHHHHHHHHHHHHhCC--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 000702 367 SSPIFVAAVTFGTSILLGA--------QLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQED 438 (1343)
Q Consensus 367 ~~~~~~~~~~f~~~~~~~~--------~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~ 438 (1343)
.....+.++++|.+.+..+ .++++.+++++........++..+...+..++.+.+|.+||.++++.++..+.
T Consensus 291 ~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~ 370 (1466)
T PTZ00265 291 ILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVEN 370 (1466)
T ss_pred HHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 1222344567888877754 57888888766555444555566666788999999999999999987653221
Q ss_pred cccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEEC-C--
Q 000702 439 ATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLC-G-- 515 (1343)
Q Consensus 439 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~-g-- 515 (1343)
.......+ ....|+++|++|+|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |
T Consensus 371 ~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~ 449 (1466)
T PTZ00265 371 NDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHN 449 (1466)
T ss_pred CCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcc
Confidence 11111111 1136999999999964334579999999999999999999999999999999999999999999994 4
Q ss_pred -----------eEEEEcccccccCccHHHHhccCCC--------------------------------------------
Q 000702 516 -----------TAAYVSQSAWIQSGNIEENILFGSP-------------------------------------------- 540 (1343)
Q Consensus 516 -----------~i~~v~Q~~~l~~~ti~~Ni~~g~~-------------------------------------------- 540 (1343)
.++||+|+|.+|++||+|||.+|..
T Consensus 450 i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (1466)
T PTZ00265 450 LKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTT 529 (1466)
T ss_pred hhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhccccc
Confidence 3799999999999999999999741
Q ss_pred --------------CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 000702 541 --------------MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSA 606 (1343)
Q Consensus 541 --------------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~ 606 (1343)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+||||++++|+|||||||||+
T Consensus 530 ~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSa 609 (1466)
T PTZ00265 530 DSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSS 609 (1466)
T ss_pred chhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccc
Confidence 234567778888899999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCC---------------------------------
Q 000702 607 VDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEG--------------------------------- 651 (1343)
Q Consensus 607 lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G--------------------------------- 651 (1343)
||+++++.+.+ .+.... +|+|+|+||||++.+..||+|++|++|
T Consensus 610 LD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1466)
T PTZ00265 610 LDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNN 688 (1466)
T ss_pred cCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccccc
Confidence 99999887765 455543 489999999999999899999999986
Q ss_pred --------------eEEEecChHHHHh-cCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCC
Q 000702 652 --------------RIIQAGKYDDLLQ-AGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNI 716 (1343)
Q Consensus 652 --------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1343)
+|+++|+|+||++ .++.|..++..+............. ..........................
T Consensus 689 ~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (1466)
T PTZ00265 689 NNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDND-KDSDMKSSAYKDSERGYDPDEMNGNS 767 (1466)
T ss_pred cccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccc-cccccccccccccccccccccccccc
Confidence 5999999999998 5888988886543221110000000 00000000000000000000000000
Q ss_pred cccccccccCCchhH-HHHHHHHHHHhhhhhhhhhHH-HHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 000702 717 DNLAKEVQDGSSASE-QKAIKEKKKAKRSRKKQLVQE-EERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIA 794 (1343)
Q Consensus 717 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1343)
............... .....+. ....+.....+. +........+..+++++.......++ .+++.++..++..+
T Consensus 768 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 843 (1466)
T PTZ00265 768 KHENESASNKKSCKMSDENASEN--NAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTI--IALSILVAGGLYPV 843 (1466)
T ss_pred cccccccccccccccccccccch--hccccchhhhhccccccccchhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 000000000000000 0000000 000000000000 00000011122333333332222211 11222233333333
Q ss_pred hhhhhhhcCCCCCC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc--cC
Q 000702 795 SNWWMAWANPQTEG-DQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDS--TP 871 (1343)
Q Consensus 795 ~~~~l~~~~~~~~~-~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~--~~ 871 (1343)
.++.++.+.+.... .........|.+++++++++..++.+++.++....+.+...+++.++++++++.|++|||+ ++
T Consensus 844 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~ 923 (1466)
T PTZ00265 844 FALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHA 923 (1466)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCC
Confidence 33333333221000 0001113345666777777788888999999999999999999999999999999999986 88
Q ss_pred hhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH---
Q 000702 872 AGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMA--SSRELVRI--- 946 (1343)
Q Consensus 872 ~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~--~~r~l~rl--- 946 (1343)
+|++++|+++|++.+...+...+..++..++.+++.++++++++|.++++++|+.++...+.....+ ..++.++.
T Consensus 924 ~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1466)
T PTZ00265 924 PGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEIN 1003 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999998887766654443322222111 11121111
Q ss_pred ----------HHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 947 ----------VSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAF 1016 (1343)
Q Consensus 947 ----------~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~ 1016 (1343)
+....+.....++|++.|++|||+|+.|+++.+++.+..+...+..........++....+++..+..++
T Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1083 (1466)
T PTZ00265 1004 QPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSF 1083 (1466)
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233456788999999999999999999999999999888777665554444443333333333322222
Q ss_pred H-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCC-CCCCCCC
Q 000702 1017 C-MVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRP-PSSWPEN 1094 (1343)
Q Consensus 1017 ~-~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~-~~~wp~~ 1094 (1343)
+ .+....+..|.++.|.+..++.+.+....++..+...+.++.....+.+|+.++++.+++.+........ +...+..
T Consensus 1084 ~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1466)
T PTZ00265 1084 AYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIK 1163 (1466)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCC
Confidence 2 1222334578899988766665554444556777888899999999999999999865532211111110 0112346
Q ss_pred ceEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----------------------
Q 000702 1095 GTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP----------------------- 1150 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~----------------------- 1150 (1343)
|.|+|+||+|+|++. ..+||+|+||+|+|||+|||||+||||||||+++|.|+|+|
T Consensus 1164 g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQ 1243 (1466)
T ss_pred ceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccc
Confidence 889999999999743 24799999999999999999999999999999999999999
Q ss_pred -------------------------------CcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCC
Q 000702 1151 -------------------------------ACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEH 1198 (1343)
Q Consensus 1151 -------------------------------~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~ 1198 (1343)
++|+|+|||+||+++++++||++|+||||||+||+|||||||.++ +++
T Consensus 1244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~a 1323 (1466)
T PTZ00265 1244 GDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDA 1323 (1466)
T ss_pred cccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCC
Confidence 699999999999999999999999999999999999999999987 468
Q ss_pred CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000702 1199 SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRT 1278 (1343)
Q Consensus 1199 sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~ 1278 (1343)
+|+||++|++.+++++||.++|+||||.|||+|.+|||||||||||||||+++|+|||||||||+||.+||+.|+++|++
T Consensus 1324 t~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~ 1403 (1466)
T PTZ00265 1324 TREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVD 1403 (1466)
T ss_pred CHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hc--CCcEEEEeccCcccccccCEEEEEeC----CEE-eeecChhHHhhcCCcHHHHHHHHh
Q 000702 1279 EF--KDCTVCTIAHRIPTVIDSDLVLVLSD----GRV-AEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1279 ~~--~~~TvI~IaHrl~ti~~~DrIlvl~~----G~i-ve~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
.. +++|+|+||||++++.+||+|+||++ |++ +|.|+|+||+++++|.|++|++.+
T Consensus 1404 ~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1404 IKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 73 68999999999999999999999999 995 599999999986689999999754
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-93 Score=848.88 Aligned_cols=567 Identities=24% Similarity=0.351 Sum_probs=480.2
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCC-CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 763 KVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEG-DQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVA 841 (1343)
Q Consensus 763 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~ 841 (1343)
...+.|.+...+++... +++.++.....++.|.+++...+.... ++..........+..++.++++++.++|.+++.
T Consensus 136 ~rl~~l~~~~~~~l~~a--~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 136 KRLLGLLKPEWKWLVAA--FVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHhchhHHHHHHH--HHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445554443333222 222334444455566655433322111 111122334456667777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 842 TFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLL 921 (1343)
Q Consensus 842 ~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1343)
+.+.+...+++..++++++++.+.|||.+.+|++++|++.|...+-+.++..+...+.+.+..++.++.|++.+|.+.++
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 000702 922 VIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEW 1001 (1343)
Q Consensus 922 ~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1001 (1343)
.+..+++...+.++|-+..|++.+...++-+.......|.+++++|||+|+.|+...++|.+.++...+.........-.
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~ 373 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGI 373 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 88888888888888888888888888899999999999999999999999999999999988887766554333333322
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCC
Q 000702 1002 LCLRMELLSTFVFAF-CMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPP 1080 (1343)
Q Consensus 1002 l~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1080 (1343)
+....++.+...... ...-..+...|.+++|.+..++.|...+...+.++...|.++.+.+.|.+|++||++.++.-+.
T Consensus 374 f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~ 453 (716)
T KOG0058|consen 374 FFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPL 453 (716)
T ss_pred hHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCC
Confidence 333333333322221 1122233457899999999999999999999999999999999999999999999987665443
Q ss_pred CCCCCCCCCCCCCCceEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcC
Q 000702 1081 VIEDSRPPSSWPENGTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDN 1159 (1343)
Q Consensus 1081 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG 1159 (1343)
. +...|. .-+|.|+|+||+|+|+.. ..+||||+||+|+|||.||+|||||+||||++++|.|+|+|++|+|++||
T Consensus 454 ~--G~~~p~--~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG 529 (716)
T KOG0058|consen 454 T--GTLAPD--HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDG 529 (716)
T ss_pred C--Cccccc--cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECC
Confidence 2 111221 468999999999999754 34699999999999999999999999999999999999999999999999
Q ss_pred eecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1160 IDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1160 ~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
+||++++.+.||++||+|.|||+||+|||||||.++ .+.+||||.+|++.++.++||.++|+||||.|||.|..|||||
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQ 609 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQ 609 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchH
Confidence 999999999999999999999999999999999876 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||||||||||+|||+|||||||||+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+++|+|+|.|+|+||
T Consensus 610 KQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eL 689 (716)
T KOG0058|consen 610 KQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDEL 689 (716)
T ss_pred HHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHHhcc
Q 000702 1319 LEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1319 l~~~~~~f~~l~~~~~~ 1335 (1343)
+++++|.|++|++++..
T Consensus 690 l~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 690 LSKPNGLYAKLVQRQLD 706 (716)
T ss_pred hhCcccHHHHHHHHhcc
Confidence 99999999999987743
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.5e-85 Score=814.35 Aligned_cols=549 Identities=26% Similarity=0.375 Sum_probs=491.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 780 LIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~v 859 (1343)
-+++..++.+++.++.++...+..|..-.............+++++++...++.++|.+++.+.+.+....+-.++++++
T Consensus 158 ~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hl 237 (709)
T COG2274 158 EVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHL 237 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34455667778888888888877765433333333444455566667778899999999999999999999999999999
Q ss_pred hccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMAS 939 (1343)
Q Consensus 860 l~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 939 (1343)
++.|++||+++++|++++|+. |++.|...+...+...+..++..+..+++|++++|+++++++..++++..+.....+.
T Consensus 238 l~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~ 316 (709)
T COG2274 238 LRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPL 316 (709)
T ss_pred HcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999985 7888888888888888888888899999999999999998888777777777777777
Q ss_pred HHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 940 SRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV 1019 (1343)
Q Consensus 940 ~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1019 (1343)
.|+..+......+...++..|++.|++|||+.+.|.++..++.+..++..+..+.......|......++..+...++..
T Consensus 317 l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~iL~ 396 (709)
T COG2274 317 LRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLILW 396 (709)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777888889999999999999999999999999999999999999998888888888888877765444333
Q ss_pred H-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEE
Q 000702 1020 L-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIE 1098 (1343)
Q Consensus 1020 ~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1098 (1343)
+ ...+..|.++.|.+..+.+.+..+.+++..++..+.+++....+.+|+.+..+.|+|.+.. ..+...|+..|.|+
T Consensus 397 ~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~---~~~~~~~~~~g~I~ 473 (709)
T COG2274 397 FGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD---KTLIHLPKLQGEIE 473 (709)
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc---cccccccccCceEE
Confidence 3 4455688999999999999999999999999999999999999999999999999886532 21344567789999
Q ss_pred EEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeec
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIP 1178 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVp 1178 (1343)
|+||+|+|+++.|++|+|+||+|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|++++++++||++|++||
T Consensus 474 ~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~ig~V~ 553 (709)
T COG2274 474 FENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQVGYVL 553 (709)
T ss_pred EEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhheeEEc
Confidence 99999999998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEE
Q 000702 1179 QDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVL 1257 (1343)
Q Consensus 1179 Qdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlL 1257 (1343)
||++||+||||||+...+ +.+|||+++|++.+++++||.++|.||||+|||+|.||||||||||+|||||+++|+||||
T Consensus 554 Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ILlL 633 (709)
T COG2274 554 QDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPKILLL 633 (709)
T ss_pred ccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCCEEEE
Confidence 999999999999998765 5788999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1258 DEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1258 DEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
||||||||++||+.|++.|.+..++||+|+||||++++++||||+|||+|+|+|.|+|+||++. +|.|+++++.+
T Consensus 634 DEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~-~g~y~~l~~~q 708 (709)
T COG2274 634 DEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQ-GGLYARLYQQQ 708 (709)
T ss_pred eCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHh-cChHHHHHhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999986 89999998764
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.8e-81 Score=789.54 Aligned_cols=544 Identities=28% Similarity=0.383 Sum_probs=457.5
Q ss_pred HHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000702 783 LAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRA 862 (1343)
Q Consensus 783 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~ 862 (1343)
++.++.....+..++++.+..+... ........+...++++.++..++.++..++..+.+.+...+++.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444555666666666664443221 11112233444455555566677777777777888999999999999999999
Q ss_pred ccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 863 PMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRE 942 (1343)
Q Consensus 863 p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~ 942 (1343)
|+++|+++++|++++|+++|++.++..+......+...++.+++.+++++..+|.+.++++...+++.+...++.+..++
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998886666667888899999999999998888777766666666666666688
Q ss_pred HHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000702 943 LVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV-LL 1021 (1343)
Q Consensus 943 l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~-~~ 1021 (1343)
..+......+.+.+.+.|+++|+++||+|+.++...+++....+...+..........++.....++..+...++.. ..
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999988777777766666555444444444433333333333222222 22
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEE
Q 000702 1022 VSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELID 1101 (1343)
Q Consensus 1022 ~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~n 1101 (1343)
.....+.++.|.+..++.|...+..++..+...+..++....+.||+.++.+.+++... ...+ .++..|.|+|+|
T Consensus 259 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~--~~~~~~~I~f~~ 333 (567)
T COG1132 259 FLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPDP--LKDTIGSIEFEN 333 (567)
T ss_pred HHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCCC--CCCCCCeEEEEE
Confidence 23456778999999999999999999999999999999999999999999987554221 1111 345668899999
Q ss_pred EEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCc
Q 000702 1102 LKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDP 1181 (1343)
Q Consensus 1102 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp 1181 (1343)
|+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||
T Consensus 334 vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~ 412 (567)
T COG1132 334 VSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQDP 412 (567)
T ss_pred EEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcccc
Confidence 99999863 46999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhcCCCCC-CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCC
Q 000702 1182 NLFEGTIRCNLDPLEE-HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEA 1260 (1343)
Q Consensus 1182 ~lF~gTIr~NLdp~~~-~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEa 1260 (1343)
+||+||||+||+++++ ++|||+++|++.++++|+|.++|+||||.|||+|.+||||||||+|||||++++|+|||||||
T Consensus 413 ~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDEa 492 (567)
T COG1132 413 LLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDEA 492 (567)
T ss_pred eeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 9999999999998865 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcc
Q 000702 1261 TASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1261 Ts~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
||++|++||+.|++++++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|++++..
T Consensus 493 TSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~~ 566 (567)
T COG1132 493 TSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQGG 566 (567)
T ss_pred ccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhhc
Confidence 9999999999999999988889999999999999999999999999999999999999986 8999999998753
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1e-79 Score=778.02 Aligned_cols=563 Identities=19% Similarity=0.246 Sum_probs=451.9
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCC-CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 765 YLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTE-GDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATF 843 (1343)
Q Consensus 765 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~ 843 (1343)
++.|++...+... +.+++.++..++.+..++.+++..+... ..........++.+++++.++..++.+++.++....
T Consensus 13 l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 13 LKQQSKPAKRWLN--LSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554433222 2333445555556666666655443211 011111122334445555556677778888888899
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 844 GLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVI 923 (1343)
Q Consensus 844 ~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 923 (1343)
+.+...+++.++++++++.|..||++.++|++++|+++|++.++..+...+..++..++.+++.++++++++|++.++++
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l 170 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILL 170 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988999999988888889999999999887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 000702 924 PMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLC 1003 (1343)
Q Consensus 924 p~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1003 (1343)
..+++.+++...+.+..++..+......+.+.+.+.|+++|+++||+|++|+++.+++.+..+...+..........+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (588)
T PRK11174 171 GTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSS 250 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666677777777777778888899999999999999999999999999998888877766655444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcC
Q 000702 1004 LRMELLSTFVFAFCMVLLVSFPHGAIDPSMA---------GLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQI 1074 (1343)
Q Consensus 1004 ~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~---------gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~ 1074 (1343)
....++..+...++.++......|.++.|.+ .+++.++..+..++..+...+..+.....+.+|+.++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 251 AVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4444333322221111111111244444432 2333555677888999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcce
Q 000702 1075 PGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGR 1154 (1343)
Q Consensus 1075 ~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~ 1154 (1343)
|++.+.. .. .+...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++|+
T Consensus 331 ~~~~~~~--~~-~~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~ 405 (588)
T PRK11174 331 PLAHPQQ--GE-KELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGS 405 (588)
T ss_pred CCcccCC--Cc-cccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcE
Confidence 6543211 11 01111234679999999988654 56999999999999999999999999999999999999 99999
Q ss_pred EEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1155 IIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1155 I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
|++||+|+++++.+++|++|+||||||+||+|||||||..+ ++++|+|+++|++.+++++++.++|+||||.|||+|.+
T Consensus 406 I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~ 485 (588)
T PRK11174 406 LKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAG 485 (588)
T ss_pred EEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCC
Confidence 99999999999999999999999999999999999999987 46999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeec
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g 1313 (1343)
|||||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|
T Consensus 486 LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G 565 (588)
T PRK11174 486 LSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQG 565 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred ChhHHhhcCCcHHHHHHHHhcc
Q 000702 1314 TPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1314 ~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
+|+||+++ +|.|++|++.+..
T Consensus 566 ~~~eL~~~-~~~y~~l~~~q~~ 586 (588)
T PRK11174 566 DYAELSQA-GGLFATLLAHRQE 586 (588)
T ss_pred CHHHHHhc-chHHHHHHHHhhc
Confidence 99999975 6899999987643
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.1e-79 Score=784.00 Aligned_cols=542 Identities=22% Similarity=0.308 Sum_probs=454.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 780 LIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~v 859 (1343)
..+++.++..+..++.+++.+...+..............+.+++++.++..++.+++.+++...+.+...+++.++++++
T Consensus 165 ~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~l 244 (711)
T TIGR00958 165 SAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSL 244 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566667777777777755543211111111222344455555667777888888999999999999999999999
Q ss_pred hccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMAS 939 (1343)
Q Consensus 860 l~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 939 (1343)
++.|+.||++++.|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..+++.+++.+.+.+.
T Consensus 245 l~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~ 324 (711)
T TIGR00958 245 LRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKR 324 (711)
T ss_pred HcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998887776666666677777777
Q ss_pred HHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHH---HHHHHHHHHHHHHHHHH
Q 000702 940 SRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAI---EWLCLRMELLSTFVFAF 1016 (1343)
Q Consensus 940 ~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~wl~~~l~~~~~~~~~~ 1016 (1343)
.++..+......+...+++.|+++|++|||+|+.|+++.+++.+..+...+......... .|....+..+..+++.
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il- 403 (711)
T TIGR00958 325 YQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVL- 403 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 777777777788888999999999999999999999999999988887766554433322 2322222222221111
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCce
Q 000702 1017 CMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGT 1096 (1343)
Q Consensus 1017 ~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~ 1096 (1343)
.+.......|.+++|.+..++.|...+..++..+...+.++.....+.+|+.++.+.+++.+.. . ....++..|.
T Consensus 404 -~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~--~--~~~~~~~~~~ 478 (711)
T TIGR00958 404 -YYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLT--G--TLAPLNLEGL 478 (711)
T ss_pred -HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--C--CCCCCCCCCe
Confidence 1122234578899999999999999999999999999999999999999999999876553321 1 1122345688
Q ss_pred EEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1097 IELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
|+|+||+|+|++. .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|+
T Consensus 479 I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 558 (711)
T TIGR00958 479 IEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQVA 558 (711)
T ss_pred EEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhhce
Confidence 9999999999753 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCE
Q 000702 1176 IIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARI 1254 (1343)
Q Consensus 1176 iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~I 1254 (1343)
+|||||++|+|||||||..+ ++.+|+++++|++.+++++++.++|+||||.+||+|.+||||||||||||||++++|+|
T Consensus 559 ~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p~I 638 (711)
T TIGR00958 559 LVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKPRV 638 (711)
T ss_pred EEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999966 46889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHH
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~ 1330 (1343)
||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||+++ +|.|++|+
T Consensus 639 LILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~-~~~y~~lv 711 (711)
T TIGR00958 639 LILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMED-QGCYKHLV 711 (711)
T ss_pred EEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhC-CCchHhcC
Confidence 99999999999999999999 345679999999999999999999999999999999999999975 68999874
No 14
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-78 Score=718.87 Aligned_cols=551 Identities=22% Similarity=0.292 Sum_probs=466.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 125 LALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILG 204 (1343)
Q Consensus 125 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 204 (1343)
.++.+.++.|+.+..+.++.++.....+..|.++++++|.+...........-...++....++.+++.....+.....+
T Consensus 137 rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~ 216 (716)
T KOG0058|consen 137 RLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAG 216 (716)
T ss_pred HHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667788999999999999999999999999999999988662211111112233445556666776666666667788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 205 MHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYS-WYLHDIWMLPLQIILALAILYKNVGIASVATLI 283 (1343)
Q Consensus 205 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~ 283 (1343)
.++-..+|..+|+++++...++++++++||++++++.|++.+.+.+ .++.....+.++.+.++.+|+..-...+++.++
T Consensus 217 ~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i 296 (716)
T KOG0058|consen 217 ERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI 296 (716)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH
Confidence 8999999999999999999999999999999999999999998754 478888888889988888887766666677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 284 ATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITF 363 (1343)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~ 363 (1343)
.+++++.+..+++++.++..++.+++..+-.+...|.+.+||+||+|+.|+.-.++..+.-+.-++..+|......+...
T Consensus 297 ~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~ 376 (716)
T KOG0058|consen 297 VVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFG 376 (716)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHh
Confidence 77888888999999999999999999999999999999999999999999755444443322222222222222222111
Q ss_pred H--HHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 000702 364 I--FWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATI 441 (1343)
Q Consensus 364 ~--~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~ 441 (1343)
. +......++++.+|.+++..+.+|.|.+.+++.|-..+..++..+...++.++++..|.+|+.++++.++.-+....
T Consensus 377 ~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~ 456 (716)
T KOG0058|consen 377 STNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGT 456 (716)
T ss_pred HHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCc
Confidence 1 12233456778899999999999999999999999999999999999999999999999999999987665433222
Q ss_pred ccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------
Q 000702 442 VLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------ 515 (1343)
Q Consensus 442 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------ 515 (1343)
..|. ...+.|+|+||+|+|+..++.++|+|+||+|+|||.+|+||||||||||+.++|.++|+|++|+|.+||
T Consensus 457 ~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~ 535 (716)
T KOG0058|consen 457 LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDI 535 (716)
T ss_pred cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhc
Confidence 2222 235689999999999988888999999999999999999999999999999999999999999999999
Q ss_pred -------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 -------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 -------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
+||+|.|+|.+|++||+|||.+|.+ .++++++++.+.+..++.+..+|+|++|.|||+|..|||||||||||
T Consensus 536 ~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAI 615 (716)
T KOG0058|consen 536 NHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAI 615 (716)
T ss_pred CHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHH
Confidence 4899999999999999999999987 57888999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC-
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG- 666 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~- 666 (1343)
||||++||.||||||+|||||+++ +++.++.+...++++|||+|+||++++++||+|+++++|++++.|+|+|+++..
T Consensus 616 ARALlr~P~VLILDEATSALDaeS-E~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~ 694 (716)
T KOG0058|consen 616 ARALLRNPRVLILDEATSALDAES-EYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPN 694 (716)
T ss_pred HHHHhcCCCEEEEechhhhcchhh-HHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcc
Confidence 999999999999999999999998 456688888888999999999999999999999999999999999999999887
Q ss_pred ccHHHHHHHHH
Q 000702 667 TDFNALVSAHH 677 (1343)
Q Consensus 667 ~~~~~~~~~~~ 677 (1343)
+.|.++++.+.
T Consensus 695 gly~~Lv~~q~ 705 (716)
T KOG0058|consen 695 GLYAKLVQRQL 705 (716)
T ss_pred cHHHHHHHHhc
Confidence 67888876543
No 15
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.4e-78 Score=779.04 Aligned_cols=544 Identities=22% Similarity=0.270 Sum_probs=459.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 780 LIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~v 859 (1343)
.++++.++..++.++.++.+....|.............+..+++++.++..++.+++.++....+.+...+++.++++++
T Consensus 140 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 219 (686)
T TIGR03797 140 AILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRL 219 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666667777766655443211111111223344455556667778888999999999999999999999999
Q ss_pred hccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMAS 939 (1343)
Q Consensus 860 l~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 939 (1343)
++.|+.||++.++|++++|++ |++.+++.+...+...+...+.+++.++++++++|++.++++.++++++.+..++.+.
T Consensus 220 l~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 298 (686)
T TIGR03797 220 LRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLL 298 (686)
T ss_pred HcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998 7899988888877777777777778888889999998877766655555555555555
Q ss_pred HHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 940 SRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV 1019 (1343)
Q Consensus 940 ~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1019 (1343)
.+...+......+...+++.|+++|+.|||+|+.|+++.+++.+..+...+..+.......|.......+..+...++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 378 (686)
T TIGR03797 299 QVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFA 378 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555666666778899999999999999999999999999999999888888877777777766666554433332222
Q ss_pred -HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEE
Q 000702 1020 -LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIE 1098 (1343)
Q Consensus 1020 -~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1098 (1343)
.......|.++.|.+..+..+...+..++..+...+.++.....+.+|+.++.+.++|.+.. ... ..+..|.|+
T Consensus 379 ~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~--~~~~~~~I~ 453 (686)
T TIGR03797 379 AAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD--PGKLSGAIE 453 (686)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--CCCCCceEE
Confidence 22334578899999999999999999999999999999999999999999999876654311 111 123457899
Q ss_pred EEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeec
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIP 1178 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVp 1178 (1343)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|++||
T Consensus 454 ~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~ 533 (686)
T TIGR03797 454 VDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVL 533 (686)
T ss_pred EEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEc
Confidence 99999999866678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEe
Q 000702 1179 QDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLD 1258 (1343)
Q Consensus 1179 Qdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLD 1258 (1343)
|||.+|+|||||||.++++.+|+++++|++.+++++++.++|+||||++||+|.+|||||||||+||||++++|+|||||
T Consensus 534 Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLD 613 (686)
T TIGR03797 534 QNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFD 613 (686)
T ss_pred cCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999987668999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHH
Q 000702 1259 EATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1259 EaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~ 1332 (1343)
||||+||++||+.|++.|++. ++|+|+||||++++.+||||+||++|+|+|.|+|+||++ ++|.|++|+++
T Consensus 614 EpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~-~~~~y~~l~~~ 684 (686)
T TIGR03797 614 EATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA-REGLFAQLARR 684 (686)
T ss_pred CCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh-CCcHHHHHHHh
Confidence 999999999999999999876 689999999999999999999999999999999999997 47999999875
No 16
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.7e-78 Score=778.85 Aligned_cols=563 Identities=21% Similarity=0.259 Sum_probs=469.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 762 MKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVA 841 (1343)
Q Consensus 762 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~ 841 (1343)
++.++.+++...+.. ..++++.++..++.++.++++....+.............+..+++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGAL--LYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555433222 233344455566666677777655543211111111223344455555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 842 TFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLL 921 (1343)
Q Consensus 842 ~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1343)
..+.+...+++.++++++++.|++||++.++|++++|++.| ..+...+...+..++..++.+++.++++++++|++.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 57888888888888888888888889999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 000702 922 VIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEW 1001 (1343)
Q Consensus 922 ~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1001 (1343)
++.++++++++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..+...+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777777777777777888999999999999999999999999999998888877777666666666
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCC
Q 000702 1002 LCLRMELLSTFVFAFCM-VLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPP 1080 (1343)
Q Consensus 1002 l~~~l~~~~~~~~~~~~-~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1080 (1343)
......++..+...++. +.......|.++.|.+..+..+...+..++..+...+.++.....+.+|+.++.+.++|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 66655555443332222 22333457889999999999999999999999999999999999999999999987766432
Q ss_pred CCCC--C-CCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEE
Q 000702 1081 VIED--S-RPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIII 1157 (1343)
Q Consensus 1081 ~~~~--~-~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~I 1157 (1343)
.... . .....++..|.|+|+||+|+|++..+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 1100 0 011113456889999999999876678999999999999999999999999999999999999999999999
Q ss_pred cCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1158 DNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1158 dG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
||+|+++++.+++|++|+||||||.+|+|||||||..++ +.+|+++++|++.+++++++.++|+||||.++|+|.||||
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSG 618 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSG 618 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCH
Confidence 999999999999999999999999999999999998764 6899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChh
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~ 1316 (1343)
||||||+||||++++|+|||||||||+||.+||+.|.+.|++ .++|+|+||||++++.+||||+||++|+|+|.|+|+
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999999999987 589999999999999999999999999999999999
Q ss_pred HHhhcCCcHHHHHH
Q 000702 1317 RLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1317 eLl~~~~~~f~~l~ 1330 (1343)
||+++ +|.|++|+
T Consensus 697 ~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAV-GGAYARLI 709 (710)
T ss_pred HHHHc-CCcHHHHh
Confidence 99974 78999987
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.8e-78 Score=777.73 Aligned_cols=561 Identities=20% Similarity=0.260 Sum_probs=461.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 762 MKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVA 841 (1343)
Q Consensus 762 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~ 841 (1343)
++.++.+++...+. +..++++.++..++.++.++++..+.|.............+..+++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555543332 2233444556666777778877766553221111111122333344445556677888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 842 TFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLL 921 (1343)
Q Consensus 842 ~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1343)
..+.+...+++.++++++++.|+.||++.++|++++|++ |+..+...+...+..++..++.+++.++++++++|+++++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 300 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLL 300 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999998 8888877777777777777777777778888899998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 000702 922 VIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEW 1001 (1343)
Q Consensus 922 ~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1001 (1343)
++..+++++.+...+.+..++..+......+...+++.|+++|++|||+|+.|+++.+++.+..+...+..+.......+
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (708)
T TIGR01193 301 SLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQG 380 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666667777777888888888889999999999999999999999999999888887776666554444444
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCC
Q 000702 1002 LCLRMELLSTFVFA-FCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPP 1080 (1343)
Q Consensus 1002 l~~~l~~~~~~~~~-~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1080 (1343)
......++..+... +..+.......|.+++|.+..+..+...+..++..+...+.++.....+++|+.++.+.|+|.+.
T Consensus 381 ~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 460 (708)
T TIGR01193 381 QQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN 460 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 33333333222211 11122233457899999999999999999999999999999999999999999999987766432
Q ss_pred CCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCe
Q 000702 1081 VIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNI 1160 (1343)
Q Consensus 1081 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~ 1160 (1343)
.. .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 461 ~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 461 KK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred cc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 11 111234456899999999999744 57999999999999999999999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcceeecCCccccCCchhhhcCCC--CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1161 DISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL--EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1161 di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~--~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
|+++++.+++|++|+||||||++|+|||||||..+ ++++|+++++|++.+++++++.++|+||||+++|+|.+|||||
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999976 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||||+||||++++|+|||||||||+||.+||+.|++.|++ .+++|+|+||||++++..||||+||++|+++|.|+|+||
T Consensus 617 rQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L 695 (708)
T TIGR01193 617 KQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDEL 695 (708)
T ss_pred HHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999987 478999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHH
Q 000702 1319 LEDKSSMFLKLVT 1331 (1343)
Q Consensus 1319 l~~~~~~f~~l~~ 1331 (1343)
+++ +|.|++|++
T Consensus 696 ~~~-~~~y~~l~~ 707 (708)
T TIGR01193 696 LDR-NGFYASLIH 707 (708)
T ss_pred Hhc-CCcHHHHhh
Confidence 975 689999985
No 18
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.8e-78 Score=760.02 Aligned_cols=546 Identities=25% Similarity=0.359 Sum_probs=450.3
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 781 IILAQVLFQFLQIASNWWMAWANPQTEGDQPKVN--PMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRS 858 (1343)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 858 (1343)
.+++.++..++.+..++++.+..+......+... ...+..+++++.++..++.+++.++....+.+.+.+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556666666777777765543211111101 11122234444445566777888888899999999999999999
Q ss_pred HhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 859 VFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMA 938 (1343)
Q Consensus 859 vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 938 (1343)
++++|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..+++.+.+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888888999999998876655444444444444455
Q ss_pred HHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000702 939 SSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWL-CLRMELLSTFVFAFC 1017 (1343)
Q Consensus 939 ~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 1017 (1343)
..+...+......+...+++.|+++|+.+||+|+.++++.+++....+...+..+.......+. .....++..+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555566666677788999999999999999999999999998887776666554443333332 222333333222221
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceE
Q 000702 1018 MVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTI 1097 (1343)
Q Consensus 1018 ~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I 1097 (1343)
.++......|.++.|.+..+..|...+..++..+...+..++....+.+|+.++.+.++++.. .. ..++..+.|
T Consensus 268 ~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~---~~~~~~~~i 341 (592)
T PRK10790 268 LMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND---DRPLQSGRI 341 (592)
T ss_pred HHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC---ccCCCCCeE
Confidence 111112357889999999999999999999999999999999999999999999876544221 11 122345789
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++.+|++|+||
T Consensus 342 ~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v 420 (592)
T PRK10790 342 DIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMV 420 (592)
T ss_pred EEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999754 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEE
Q 000702 1178 PQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVL 1257 (1343)
Q Consensus 1178 pQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlL 1257 (1343)
||||.+|+||||+||.++++++|++++++++++|+++++.++|+||||.++|+|.+||||||||+||||||+++|+||||
T Consensus 421 ~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 421 QQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred ccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1258 DEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1258 DEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
|||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+||+++ ++.|++|++.+.
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~ 576 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQL 576 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHh
Confidence 9999999999999999999998889999999999999999999999999999999999999986 699999998664
No 19
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.8e-77 Score=753.35 Aligned_cols=545 Identities=22% Similarity=0.282 Sum_probs=462.3
Q ss_pred HHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000702 784 AQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMV-LLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRA 862 (1343)
Q Consensus 784 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~ 862 (1343)
+.++..+.....+++++...+...... ...... +...++++.++..++.+++.++....+.+....++.++++++++.
T Consensus 33 ~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 33 ALILNAASDTFMLSLLKPLLDDGFGKA-DRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334444444555555554443221111 111112 222233455556677778888888889999999999999999999
Q ss_pred ccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 863 PMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRE 942 (1343)
Q Consensus 863 p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~ 942 (1343)
|..+|++...|++++|+++|++.+...+...+..++..++.+++.++++++.+|+++++++..+++.+++..++.+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998877776666666666667777777
Q ss_pred HHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000702 943 LVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-L 1021 (1343)
Q Consensus 943 l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~ 1021 (1343)
..+......+...+++.|.++|+.+||+|+.++.+.+++.+..+...+..........|......++..+...++..+ .
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777888889999999999999999999999999999999988888777777666776666666555433322222 2
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEE
Q 000702 1022 VSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELID 1101 (1343)
Q Consensus 1022 ~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~n 1101 (1343)
.....|.+++|.+.+++++...+..++..+...+..+.....+.+|+.++.+.+++.+.. . ....|..+.|+|+|
T Consensus 272 ~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~--~~~~~~~~~i~~~~ 346 (582)
T PRK11176 272 FPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG---K--RVIERAKGDIEFRN 346 (582)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC---C--cCCCCCCCeEEEEE
Confidence 334568899999999999999999999999999999999999999999999876553211 1 11123456899999
Q ss_pred EEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCc
Q 000702 1102 LKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDP 1181 (1343)
Q Consensus 1102 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp 1181 (1343)
|+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|+||||||
T Consensus 347 vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~ 426 (582)
T PRK11176 347 VTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNV 426 (582)
T ss_pred EEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCc
Confidence 99999876678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhcCCC--CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeC
Q 000702 1182 NLFEGTIRCNLDPL--EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDE 1259 (1343)
Q Consensus 1182 ~lF~gTIr~NLdp~--~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDE 1259 (1343)
++|+||||+||..+ ++++|++++++++.+++++++.++|+||||++||+|.+|||||||||+|||||+++|+||||||
T Consensus 427 ~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDE 506 (582)
T PRK11176 427 HLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDE 506 (582)
T ss_pred eeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 99999999999864 3479999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcc
Q 000702 1260 ATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1260 aTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
|||+||++|++.|.+.|++..+++|+|+||||++++..||||++|++|+|+|.|+|++|+++ ++.|++|++++..
T Consensus 507 ptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~~~ 581 (582)
T PRK11176 507 ATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQFG 581 (582)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHHhc
Confidence 99999999999999999998889999999999999999999999999999999999999975 6899999987643
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.8e-76 Score=742.60 Aligned_cols=544 Identities=19% Similarity=0.239 Sum_probs=444.7
Q ss_pred HHHHHHHHHHHHhhhhhhhcCCCCC-CCCC---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 783 LAQVLFQFLQIASNWWMAWANPQTE-GDQP---KVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRS 858 (1343)
Q Consensus 783 ~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~---~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 858 (1343)
++.++..++.+..++.+++..+... .... ..........+.++.++..++.++..++....+.+....++.+++++
T Consensus 23 ~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ 102 (574)
T PRK11160 23 LLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSK 102 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555556666666666544211 1110 00011112233344455667777888888889999999999999999
Q ss_pred HhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000702 859 VFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVAC-LWMQKYYM 937 (1343)
Q Consensus 859 vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~-~~~~~~~~ 937 (1343)
+++.|+.||++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|.+.++++..+++. ..+..++.
T Consensus 103 l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~ 182 (574)
T PRK11160 103 LLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFY 182 (574)
T ss_pred hhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887664444333 33445555
Q ss_pred HHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 938 ASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFC 1017 (1343)
Q Consensus 938 ~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 1017 (1343)
+..+...+......+.+.+.+.|+++|+++||+|+.++++.+++.+..+...+..........+......++..+...++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 262 (574)
T PRK11160 183 RLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLM 262 (574)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667777888889999999999999999999999999999998888877776666655555555555544333322
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCce
Q 000702 1018 MVLLVSFPHGAIDPSMAGLAVTYGL-NLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGT 1096 (1343)
Q Consensus 1018 ~~~~~~~~~g~~~~~~~gl~l~~~~-~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~ 1096 (1343)
..+......|.++.|.+..++.|.. ....++..+...+..+.....+.+|+.++.+.+++.+.. ...+ ..+..+.
T Consensus 263 ~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~--~~~~--~~~~~~~ 338 (574)
T PRK11160 263 LWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP--TTST--AAADQVS 338 (574)
T ss_pred HHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cccC--CCCCCCe
Confidence 2222112356777877666666643 344566777778888889999999999999876553211 0111 1134578
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+|+++++.+++|++|++
T Consensus 339 i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 418 (574)
T PRK11160 339 LTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISV 418 (574)
T ss_pred EEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeE
Confidence 99999999997655579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
|||||++|+||||+||.... +.+|+++++|++.+++++++.+ |+||||++||+|.+||||||||+|||||++++|+||
T Consensus 419 v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRialARall~~~~il 497 (574)
T PRK11160 419 VSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLL 497 (574)
T ss_pred EcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998754 6899999999999999999999 999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHH
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~ 1332 (1343)
|||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+||+++ +|.|++|++.
T Consensus 498 ilDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 498 LLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ-QGRYYQLKQR 573 (574)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc-CcHHHHHHhh
Confidence 999999999999999999999998889999999999999999999999999999999999999974 7999999863
No 21
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.3e-76 Score=761.77 Aligned_cols=551 Identities=22% Similarity=0.259 Sum_probs=455.7
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 764 VYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATF 843 (1343)
Q Consensus 764 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~ 843 (1343)
.++.+++...+. +..++++.++..++.++.++.++...|.............+..+++++.++..++.+++.++....
T Consensus 137 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (694)
T TIGR03375 137 WFWSTLKESWPL--YRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVA 214 (694)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444433222 223344455556666777777765554321111111122233344444555677888899999999
Q ss_pred HHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 844 GLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVI 923 (1343)
Q Consensus 844 ~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 923 (1343)
+.+...+++.++++++++.|++| ++.++|++++|+ +|++.+...+...+...+..++.+++.++++++++|+++++++
T Consensus 215 ~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 215 GKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999998 789999999999 7999999998888887777777777888888899999887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 000702 924 PMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLC 1003 (1343)
Q Consensus 924 p~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1003 (1343)
..+++++.+..++.+..++..+......+...+++.|+++|+++||+|+.|+.+.+++.+..+...+..+.......+..
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666666666777777777888899999999999999999999999999999888887777666655555555
Q ss_pred HHHHHHHHHHHHHH-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCC
Q 000702 1004 LRMELLSTFVFAFC-MVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVI 1082 (1343)
Q Consensus 1004 ~~l~~~~~~~~~~~-~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1082 (1343)
....++..+...++ .+....+..|.++.|.+..++++...+..++..+...+.++.....+.+|+.++.+.++|.+..
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~- 451 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG- 451 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-
Confidence 44444443322221 1222334578899999999999999999999999999999999999999999999877664321
Q ss_pred CCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeec
Q 000702 1083 EDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDI 1162 (1343)
Q Consensus 1083 ~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di 1162 (1343)
.......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+
T Consensus 452 --~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 452 --TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred --CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 111111234578999999999986666799999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1163 STIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1163 ~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
++++++++|++|++|||||++|+|||||||.+++ +++|+|+++|++.+++++++.++|+||||.+||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999775 489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||||+||++|+++|.|+|+||+++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999875
No 22
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-76 Score=692.10 Aligned_cols=514 Identities=22% Similarity=0.300 Sum_probs=449.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhh
Q 000702 814 NPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFR 893 (1343)
Q Consensus 814 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~ 893 (1343)
....+++.++++.++..+..+.+.......+.++-..+|.++++++.+.+..+-...|+|+....++.-++.++..+...
T Consensus 38 ~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 38 SLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34455666666667777888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheee
Q 000702 894 LGGFASTTIQLVGIIGVMTMVTWQVLLL---VIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRG 970 (1343)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIra 970 (1343)
+..++.+.+..+.+++.+++.+|...++ ..|++++++++. ...++...+..-.+...+.+||-+.+.|+.|+|+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv---g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~ 194 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV---GLAAKDASEKQFSALARLSGHFLDRLRGLETLRA 194 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 9999999999999999999999996554 456666665543 2334444555566677889999999999999999
Q ss_pred cCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-CCCCHHHHHHHHHHHHHHHHHH
Q 000702 971 FGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVS-FPH-GAIDPSMAGLAVTYGLNLNARL 1048 (1343)
Q Consensus 971 f~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~-~~~-g~~~~~~~gl~l~~~~~~~~~l 1048 (1343)
|+..+...++..+...++.+........+---+..++++..+-++++++.+.. +.. |.++-...-+++..+--+..++
T Consensus 195 f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~Pl 274 (559)
T COG4988 195 FGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPL 274 (559)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHH
Confidence 99999999999888888888877777766666778888888777666655432 334 6777777777888888999999
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEE
Q 000702 1049 SRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIG 1128 (1343)
Q Consensus 1049 ~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~Gekvg 1128 (1343)
..+...|....+...+.+.+..+.+.|.+.+...+ .....|....+|+.+|++++|+++. ++++|+||+++|||++|
T Consensus 275 R~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~--~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~ta 351 (559)
T COG4988 275 RDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE--KAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTA 351 (559)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc--ccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEE
Confidence 99999999999998999999999987765432211 1122333445677779999998775 79999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHH
Q 000702 1129 IVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEAL 1207 (1343)
Q Consensus 1129 IVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL 1207 (1343)
|||+||||||||+++|+|+.+|++|+|.+||+|+++++.+++|+++++|||+|++|+|||||||..++ +.+|+||++|+
T Consensus 352 lvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al 431 (559)
T COG4988 352 LVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAAL 431 (559)
T ss_pred EECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 58999999999
Q ss_pred HHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000702 1208 DKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCT 1287 (1343)
Q Consensus 1208 ~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~ 1287 (1343)
+++++.+++.. |+||||.+||+|.+|||||+|||+||||++++++++++|||||+||.|||+.|++.|.+.++++|||+
T Consensus 432 ~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~ 510 (559)
T COG4988 432 DQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLV 510 (559)
T ss_pred HHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEE
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcc
Q 000702 1288 IAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1288 IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
||||++.+.++|+|+|||+|+++|.|+|++|.++ +|.|++|+.++.+
T Consensus 511 itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 511 ITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred EEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 9999999999999999999999999999999974 7999999988654
No 23
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.5e-79 Score=676.79 Aligned_cols=496 Identities=22% Similarity=0.321 Sum_probs=420.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHH
Q 000702 829 SSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGII 908 (1343)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~ 908 (1343)
+.++.-+|+++.......+.+++-.++++++....++|+-...+|+++.-+.+-.+.+. .+...+.++...++.+..++
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 35677788888888899999999999999999999999999999998887777776666 55555566666666665555
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHH
Q 000702 909 GVMT-MVTWQVLLLVIPMAVACLWM----QKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLY 983 (1343)
Q Consensus 909 ~~~~-~~~~~~~~~~ip~~~~~~~~----~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~ 983 (1343)
+..+ ..+||+.++++.+..+|.++ ..+-.+..|.+...+.++ .+.-.+++-+.+|+|-|++|+...+++.+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nes----rAr~vDsllNFETVKyy~Ae~yEverYre 426 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNES----RARQVDSLLNFETVKYYNAEDYEVERYRE 426 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhh----hhhhhhhhhcchhhhccCchhhhHHHHHH
Confidence 5443 46788888777776666543 222223333333333333 34456889999999999999999999999
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000702 984 LLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKI 1062 (1343)
Q Consensus 984 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~ 1062 (1343)
.++.+++.-+........++..-+.+..+-.....++ +..+..+..+.|...++.+|.+++..+++|+...+..++++.
T Consensus 427 Ail~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nf 506 (790)
T KOG0056|consen 427 AILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNF 506 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhh
Confidence 9999999888877777666666555544433333222 233447788899999999999999999999999999999999
Q ss_pred hhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHH
Q 000702 1063 ISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQ 1142 (1343)
Q Consensus 1063 ~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~ 1142 (1343)
.-.|++.+.++.++|-. +....++---.+|.|+|+||+|.|+|+. |||+||||++.||+.||+|||||+||||+++
T Consensus 507 iDmEnmfdllkee~eVv---d~P~a~pl~~~~G~i~fsnvtF~Y~p~k-~vl~disF~v~pGktvAlVG~SGaGKSTimR 582 (790)
T KOG0056|consen 507 IDMENMFDLLKEEPEVV---DLPGAPPLKVTQGKIEFSNVTFAYDPGK-PVLSDISFTVQPGKTVALVGPSGAGKSTIMR 582 (790)
T ss_pred hhHHHHHHHhhcCchhh---cCCCCCCccccCCeEEEEEeEEecCCCC-ceeecceEEecCCcEEEEECCCCCchhHHHH
Confidence 99999999997655432 2111222223579999999999999875 6999999999999999999999999999999
Q ss_pred HHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccC
Q 000702 1143 ALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQ 1221 (1343)
Q Consensus 1143 ~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~ 1221 (1343)
+|+|++|.++|+|+|||+||+.+..+.||+.||+||||.+||++||..||.+.. .++|||+.+|++.+++||.|.+.|+
T Consensus 583 lLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPe 662 (790)
T KOG0056|consen 583 LLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPE 662 (790)
T ss_pred HHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCch
Confidence 999999999999999999999999999999999999999999999999998764 6899999999999999999999999
Q ss_pred CCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEE
Q 000702 1222 KLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLV 1301 (1343)
Q Consensus 1222 gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrI 1301 (1343)
||+|.|||+|-.||||||||+|+||++||+|.|++||||||+||..||+.||.+|.+..+++|.|+|||||+||.++|.|
T Consensus 663 gY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~I 742 (790)
T KOG0056|consen 663 GYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLI 742 (790)
T ss_pred hhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1302 LVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1302 lvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
+|+++|+|+|.|+|+||+++++|.|++|++.+
T Consensus 743 Lvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 743 LVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred EEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 99999999999999999999999999999654
No 24
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-78 Score=754.42 Aligned_cols=514 Identities=23% Similarity=0.310 Sum_probs=435.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhh
Q 000702 814 NPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFR 893 (1343)
Q Consensus 814 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~ 893 (1343)
....+.+.|+.++++..+..++...++.+.+.|...++|.+.++++||++++|||++..|++..|+++|++.+++.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34566777788888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCc
Q 000702 894 LGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQ 973 (1343)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~ 973 (1343)
+..+++.+.++++.+++.++..|.+.++++++.++.......+.+..-.....+..+.+..-+...|++.+++|+.+|+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999999999999999999999999988887777777666666666666667777777788899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 000702 974 EKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL----LVSFPHGAIDPSMAGLAVTYGLNLNARLS 1049 (1343)
Q Consensus 974 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~----~~~~~~g~~~~~~~gl~l~~~~~~~~~l~ 1049 (1343)
|++..++|.+.++...+....... |.++-..+.-.++.+..+.. ...+..+..++|.+...+...+.-...+.
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g~---~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLg 305 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKGL---FKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLG 305 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhh
Confidence 999999999988887765433221 22222222111111111111 11222455666665544444444444555
Q ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCC-CcccccceeEecCCCEEE
Q 000702 1050 RWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENL-PLVLHGITCAFPGGKKIG 1128 (1343)
Q Consensus 1050 ~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~is~~I~~Gekvg 1128 (1343)
........+.+...+..++.+.++..+........... .-..+|.|+|+||+|+|+..+ .++|+|+||+|++||.||
T Consensus 306 qa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~va 383 (1228)
T KOG0055|consen 306 QASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVA 383 (1228)
T ss_pred ccccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEE
Confidence 55666777788889999999988744332221111111 123579999999999997653 379999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHH
Q 000702 1129 IVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEAL 1207 (1343)
Q Consensus 1129 IVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL 1207 (1343)
+||+|||||||++++|.|+|+|++|+|+|||.||++++.++||++||+|.|+|+||++||+|||.++. +.|++|+.+|+
T Consensus 384 lVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~ 463 (1228)
T KOG0055|consen 384 LVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAA 463 (1228)
T ss_pred EECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999875 78999999999
Q ss_pred HHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000702 1208 DKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCT 1287 (1343)
Q Consensus 1208 ~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~ 1287 (1343)
+.++.++||.++|+||||.+||+|..||||||||+||||||+++|+||+||||||+||+++|+.+|++|++..+|+|.|+
T Consensus 464 k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTiv 543 (1228)
T KOG0055|consen 464 KAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIV 543 (1228)
T ss_pred HHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1288 IAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1288 IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
|||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++||+.+
T Consensus 544 VaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q 588 (1228)
T KOG0055|consen 544 VAHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQ 588 (1228)
T ss_pred EeeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHH
Confidence 99999999999999999999999999999999976 9999999765
No 25
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.7e-75 Score=719.71 Aligned_cols=548 Identities=24% Similarity=0.346 Sum_probs=468.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 122 TPSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVD 201 (1343)
Q Consensus 122 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 201 (1343)
..+.++..++.|++.+.-.++..++..++.++.|++.+.++|.+-...+ ....+.+++++.+..+++.++.....+...
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888899999999999999999999999999999998764432 234556666777777888777777777778
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q 000702 202 ILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDI-WMLPLQIILALAILYKNVGIASV 279 (1343)
Q Consensus 202 ~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~-~~~~~~i~~~~~~l~~~~g~~~l 279 (1343)
+++.|+...+...+|+|++++|..++++.++|++++++. |.++|.++.. .+... ...++ .++.+.+|+.+-+..++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~-~~i~l~vm~~ys~~L~l 297 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLF-ALIFLAVMFLYSWKLTL 297 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999985 8999998764 33333 33343 44444555566667778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 280 ATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQA 359 (1343)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~ 359 (1343)
++++.+++++.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+..+...+......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 88888888999999999999999999999999999999999999999999999999999998887776665444444333
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 000702 360 FITFIFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQE 437 (1343)
Q Consensus 360 ~~~~~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~ 437 (1343)
....+.. ....-+.+++||++.++++.+|.|.++++.++.+.+..|+..+.+.+..+++++++.+|+.++++.|.+.+
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 3322211 12223456899999999999999999999999999999999999999999999999999999999887644
Q ss_pred ccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--
Q 000702 438 DATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-- 515 (1343)
Q Consensus 438 ~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-- 515 (1343)
........+...+.|+++|++|+|.++ ++++|+|+||+|++||.+||||+||||||||+|+|+|.|+|++|+|.+||
T Consensus 458 ~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~d 536 (709)
T COG2274 458 GDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVD 536 (709)
T ss_pred cccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 322111222334679999999999764 34899999999999999999999999999999999999999999999999
Q ss_pred -----------eEEEEcccccccCccHHHHhccCCCC-CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 516 -----------TAAYVSQSAWIQSGNIEENILFGSPM-DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 -----------~i~~v~Q~~~l~~~ti~~Ni~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
.++||+|++.+|+|||+|||.+|+|. +.++..++++.++.++++..+|.|++|.|||+|.+|||||||
T Consensus 537 l~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQ 616 (709)
T COG2274 537 LNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQ 616 (709)
T ss_pred HHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHH
Confidence 48999999999999999999999985 457788888888999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|++||||++++|+|+||||||||||+++++.+.++ +....+|+|+|+||||++.+..||+|+||++|+|+++|+|+|++
T Consensus 617 rlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 617 RLALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999988876 55667799999999999999999999999999999999999999
Q ss_pred hcCccHHHHHH
Q 000702 664 QAGTDFNALVS 674 (1343)
Q Consensus 664 ~~~~~~~~~~~ 674 (1343)
+.++.|.+++.
T Consensus 696 ~~~g~y~~l~~ 706 (709)
T COG2274 696 AQGGLYARLYQ 706 (709)
T ss_pred HhcChHHHHHh
Confidence 99888888764
No 26
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.1e-75 Score=737.71 Aligned_cols=546 Identities=24% Similarity=0.334 Sum_probs=473.3
Q ss_pred HHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000702 783 LAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRA 862 (1343)
Q Consensus 783 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~ 862 (1343)
++.++..++..+.+++++...+.............+..+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34455555555666666543332111111112223344566666677788888999999999999999999999999999
Q ss_pred ccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 863 PMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRE 942 (1343)
Q Consensus 863 p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~ 942 (1343)
|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.+++++++++.+++..++.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888888888888888888888
Q ss_pred HHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000702 943 LVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV-LL 1021 (1343)
Q Consensus 943 l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~-~~ 1021 (1343)
..+......+...+.+.|+++|+.+||+++.++++.+++.+..+...+..........+......++..+...++.+ ..
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999999999999888877777777777766666655433332222 22
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEE
Q 000702 1022 VSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELID 1101 (1343)
Q Consensus 1022 ~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~n 1101 (1343)
.....|.+++|.+..+++++..+..++..+...+..+.....+.+|+.++.+.+++.+.. ..+.. +..+.|+|+|
T Consensus 261 ~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~i~~~~ 335 (571)
T TIGR02203 261 FQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGDVEFRN 335 (571)
T ss_pred HHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCeEEEEE
Confidence 334578899999999999999999999999999999999999999999999866553311 11111 2456899999
Q ss_pred EEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCc
Q 000702 1102 LKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDP 1181 (1343)
Q Consensus 1102 vs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp 1181 (1343)
|+|+|++..+++|+|+||+|+|||+|+|+|+||||||||+++|.|+++|++|+|++||+|+++++.+++|++++||||||
T Consensus 336 v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~ 415 (571)
T TIGR02203 336 VTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQDV 415 (571)
T ss_pred EEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEccCc
Confidence 99999875567999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCchhhhcCCCC--CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeC
Q 000702 1182 NLFEGTIRCNLDPLE--EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDE 1259 (1343)
Q Consensus 1182 ~lF~gTIr~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDE 1259 (1343)
++|+||||+||..++ +.+|++++++++.+++++++.++|+||||+++|+|.+||||||||||||||++++|+||||||
T Consensus 416 ~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illLDE 495 (571)
T TIGR02203 416 VLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILILDE 495 (571)
T ss_pred ccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999999999774 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1260 ATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1260 aTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
|||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++ ++.|+++++++.
T Consensus 496 pts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~~ 569 (571)
T TIGR02203 496 ATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQF 569 (571)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHhh
Confidence 99999999999999999999899999999999999999999999999999999999999975 689999988653
No 27
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.2e-76 Score=672.52 Aligned_cols=499 Identities=20% Similarity=0.278 Sum_probs=434.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHH
Q 000702 826 AFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLV 905 (1343)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~ 905 (1343)
++...+.-++..++.+...++.-..+|.++++++...+..-......|+++||+..|++.+|+.+-..+..++..++...
T Consensus 68 aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~ 147 (573)
T COG4987 68 AILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIA 147 (573)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHH
Confidence 33444455555666777888999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHH
Q 000702 906 GIIGVMTMVTWQVLLLVI-PMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYL 984 (1343)
Q Consensus 906 ~~~~~~~~~~~~~~~~~i-p~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~ 984 (1343)
+..+.+.+++|++.+.+. .++++.+.+...+.+..|...+.-...+..+.++|.|.+.|....+.||++++|.+.+...
T Consensus 148 ~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~ 227 (573)
T COG4987 148 VVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEAT 227 (573)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHH
Confidence 888888888988876554 4455556677777788888888888899999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Q 000702 985 LDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCM-VLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWI-LSFCKLENKI 1062 (1343)
Q Consensus 985 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~-~~~~~~e~~~ 1062 (1343)
.+...+..........|....+.++.++.+.... .+......|..+...+.+++..++.....+.-+. ..+.++....
T Consensus 228 e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~ 307 (573)
T COG4987 228 EASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVI 307 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHH
Confidence 9999999999999999999999888887666333 3333345666554344444444444445555555 5567888888
Q ss_pred hhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCc-eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHH
Q 000702 1063 ISIERIYQYSQIPGEAPPVIEDSRPPSSWPENG-TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLI 1141 (1343)
Q Consensus 1063 ~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g-~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl 1141 (1343)
-|..|+.+..+.++|..... .. -|..+ .++++||+|+|+++.++||+|+||++++||||||+||||||||||+
T Consensus 308 ~Sa~Rl~~i~~q~~e~~~~~--~~----~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTll 381 (573)
T COG4987 308 ASARRLNDILDQKPEVTFPD--EQ----TATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLL 381 (573)
T ss_pred HHHHHHhhhccCCcccCCCc--cc----cCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHH
Confidence 99999999987766654321 11 11222 7999999999999888999999999999999999999999999999
Q ss_pred HHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhccc
Q 000702 1142 QALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKD 1220 (1343)
Q Consensus 1142 ~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp 1220 (1343)
++|.|.++|++|+|+.+|.|++.++.+++|+.|++++|.+++|+||+|+||... .+.||||+|++|++++|++++.+.|
T Consensus 382 qLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p 461 (573)
T COG4987 382 QLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAP 461 (573)
T ss_pred HHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhCh
Confidence 999999999999999999999999999999999999999999999999999854 4689999999999999999999999
Q ss_pred CCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCE
Q 000702 1221 QKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDL 1300 (1343)
Q Consensus 1221 ~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~Dr 1300 (1343)
+||+|.+||+|.+|||||||||+|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..|||
T Consensus 462 ~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~dr 541 (573)
T COG4987 462 DGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDR 541 (573)
T ss_pred hhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCEEeeecChhHHhhcCCcHHHHHHH
Q 000702 1301 VLVLSDGRVAEFDTPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1301 Ilvl~~G~ive~g~p~eLl~~~~~~f~~l~~ 1331 (1343)
|+|||+|+++|.|+|++|++ ++|.|++|.+
T Consensus 542 Iivl~~Gkiie~G~~~~Ll~-~~g~~~~l~q 571 (573)
T COG4987 542 IIVLDNGKIIEEGTHAELLA-NNGRYKRLYQ 571 (573)
T ss_pred EEEEECCeeeecCCHHhhhc-cccHHHHHhc
Confidence 99999999999999999998 5899999975
No 28
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.8e-74 Score=730.33 Aligned_cols=547 Identities=22% Similarity=0.267 Sum_probs=437.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 123 PSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDI 202 (1343)
Q Consensus 123 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 202 (1343)
...++.+.+.+++.+++..++.++..++..+.|++++.++|.+..++......+.++++++++.++..++.....+...+
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFK 89 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999999999764211111122333444555556666666666667788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVAT 281 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~ 281 (1343)
.+.++...++..+|+|+++++...+++.++|++++++++|++++.+++. .+..++...+.+++++++++...+..+++.
T Consensus 90 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 169 (588)
T PRK11174 90 AGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998754 566666666666666555554444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000702 282 LIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEE----MRGVEFRWLRKALYS 357 (1343)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~----~r~~e~~~~~~~~~~ 357 (1343)
++++++.+.+...+.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+ .++.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566677888888999999999999999999999999999999999987777644 444444433333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 358 QAFITFIFWSSPIFVAAVTFGTSILLGAQLTAG---------SVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISG 428 (1343)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~---------~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~ 428 (1343)
..+..++.. .+.+ .++.++.+.+. +.+|.| .+++++.+...+..|+..++..+..+.+++++.+|+.+
T Consensus 250 ~~~~~~~~~-~~~~-~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFAS-ISIA-LVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHH-HHHH-HHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211 1111 22233333333 444444 44566677788899999999999999999999999999
Q ss_pred hhcccccccccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCC
Q 000702 429 FLQEEELQEDATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKIS 508 (1343)
Q Consensus 429 fl~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~ 508 (1343)
+++.++.++..............|+++|++|.|++ ++++|+|+||+|+||+++||||+||||||||+++|+|++ |++
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 99876533211110001112236999999987764 368999999999999999999999999999999999999 899
Q ss_pred cEEEECC-------------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCC
Q 000702 509 GEVRLCG-------------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRG 574 (1343)
Q Consensus 509 G~i~~~g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g 574 (1343)
|+|.++| .++||||+||+|++||||||++|++ .++++++++++.|+++++++.+|+|++|.+||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999998 4899999999999999999999965 8999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000702 575 INLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRII 654 (1343)
Q Consensus 575 ~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~ 654 (1343)
.+|||||||||+||||++++|+||||||||||||+++++++.+ .+....+++|+|+||||++.+..||+|++|++|+++
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~ 562 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIV 562 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEe
Confidence 9999999999999999999999999999999999999999876 566667899999999999999999999999999999
Q ss_pred EecChHHHHhcCccHHHHHHHH
Q 000702 655 QAGKYDDLLQAGTDFNALVSAH 676 (1343)
Q Consensus 655 ~~g~~~~l~~~~~~~~~~~~~~ 676 (1343)
++|+|+|++++++.|.+++..+
T Consensus 563 e~G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 563 QQGDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred ecCCHHHHHhcchHHHHHHHHh
Confidence 9999999999888888877543
No 29
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.8e-75 Score=746.64 Aligned_cols=564 Identities=23% Similarity=0.281 Sum_probs=465.6
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 762 MKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVA 841 (1343)
Q Consensus 762 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~ 841 (1343)
++.++.+++...+. +..++++.++..++.++.++.+....|.............+..+++++.++..++.+++.++..
T Consensus 127 ~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~ 204 (694)
T TIGR01846 127 FSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFA 204 (694)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444454433222 2233334455555666677777655543211111112223344455555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 842 TFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLL 921 (1343)
Q Consensus 842 ~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1343)
..+.+....++.++++++++.|+.||++.++|++++|+ +|++.+...+...+..++..++.+++.++++++++|++.++
T Consensus 205 ~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 283 (694)
T TIGR01846 205 HLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGV 283 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 69999999888877777777776777788888999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 000702 922 VIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEW 1001 (1343)
Q Consensus 922 ~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~w 1001 (1343)
++..++++..+..+..+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..+.......+
T Consensus 284 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (694)
T TIGR01846 284 VIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNI 363 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555555555555555555555566778889999999999999999999999999999988888777776666666
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCC
Q 000702 1002 LCLRMELLSTFVFAFCMV-LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPP 1080 (1343)
Q Consensus 1002 l~~~l~~~~~~~~~~~~~-~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1080 (1343)
......++..+...++.+ .......|.++.|.+..+.+++..+..++..+...+..++....+.+|+.++.+.|+|.+.
T Consensus 364 ~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 443 (694)
T TIGR01846 364 AGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRS 443 (694)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccC
Confidence 666665555433332222 2233457889999999999999999999999999999999999999999999987766432
Q ss_pred CCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCe
Q 000702 1081 VIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNI 1160 (1343)
Q Consensus 1081 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~ 1160 (1343)
. . ........|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+
T Consensus 444 ~---~-~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~ 519 (694)
T TIGR01846 444 A---G-LAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGV 519 (694)
T ss_pred C---C-CCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 1 01111235789999999999876667999999999999999999999999999999999999999999999999
Q ss_pred ecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1161 DISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1161 di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
|+++++.+++|++|++|||||.+|+|||||||... ++.+++++++|++.+++++++.++|+||||.++|+|.+||||||
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~ 599 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQR 599 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHH
Confidence 99999999999999999999999999999999875 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHh
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||||+||++|+|+|.|+|++|+
T Consensus 600 qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~ 679 (694)
T TIGR01846 600 QRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELL 679 (694)
T ss_pred HHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHh
Q 000702 1320 EDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1320 ~~~~~~f~~l~~~~ 1333 (1343)
++ +|.|++|++.+
T Consensus 680 ~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 680 AL-QGLYARLWQQQ 692 (694)
T ss_pred Hc-CChHHHHHHhh
Confidence 85 69999999854
No 30
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=6e-74 Score=716.46 Aligned_cols=506 Identities=21% Similarity=0.262 Sum_probs=413.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 782 ILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLV--VYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 782 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~--~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~v 859 (1343)
+++.++..++.++.++.+++..+...... . ....+.. .++++.++..++.+++.++....+.+...+++.++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 96 (529)
T TIGR02868 19 ILLGALALGSAVALLGVSAWLISRAAEMP-P-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRL 96 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445555666666666666554221111 1 1111111 112234445666777888888889999999999999999
Q ss_pred hccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLW-MQKYYMA 938 (1343)
Q Consensus 860 l~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~-~~~~~~~ 938 (1343)
++.|..||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+.++++..++++.+ ...++.+
T Consensus 97 l~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~ 176 (529)
T TIGR02868 97 ARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLR 176 (529)
T ss_pred hccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988776655444433 3344445
Q ss_pred HHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 939 SSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCM 1018 (1343)
Q Consensus 939 ~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 1018 (1343)
..++..+......+.+.+++.|+++|+++||+|+.++.+.+++.+..+...+..........+......++..+...++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (529)
T TIGR02868 177 AARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGAL 256 (529)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666667778899999999999999999999999999999888877776665554444444444443333222222
Q ss_pred H-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceE
Q 000702 1019 V-LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTI 1097 (1343)
Q Consensus 1019 ~-~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I 1097 (1343)
. .......|.++.|.+..++.++..+..++..+...+..+.....+.+|+.++.+.++|.+.. +...+...+|..+.|
T Consensus 257 ~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~~~~~~~~~~~~I 335 (529)
T TIGR02868 257 WAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEG-VVPAAGALGLGKPTL 335 (529)
T ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCC-CCCCCcccCCCCceE
Confidence 1 12234578899999999999999999999999999999999999999999999876553221 111111123456789
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|+||
T Consensus 336 ~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V 413 (529)
T TIGR02868 336 ELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVF 413 (529)
T ss_pred EEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEE
Confidence 9999999997643 599999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1178 PQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1178 pQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
||||++|+|||||||.++ ++.+|+++++|++.+++++++.++|+||||+|||+|.+||||||||||||||++++|+|||
T Consensus 414 ~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~ili 493 (529)
T TIGR02868 414 AQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILL 493 (529)
T ss_pred ccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999986 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCc
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRI 1292 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl 1292 (1343)
||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 494 LDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 494 LDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999988999999999996
No 31
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.4e-73 Score=717.45 Aligned_cols=546 Identities=21% Similarity=0.285 Sum_probs=449.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 779 PLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRS 858 (1343)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 858 (1343)
.+++++.++..++.+..++++.+..+.... ......++..++++.++..+..++...+......+....+..+++++
T Consensus 22 ~~~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 98 (588)
T PRK13657 22 ILLAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFER 98 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455566677777778887765553221 11122223333333333333344444444455555556667799999
Q ss_pred HhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 859 VFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMA 938 (1343)
Q Consensus 859 vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 938 (1343)
+++.|..+|++.+.|++++|+++|++.+...+...+..++..++.+++.++++++.+|++.++++.++++++++..++.+
T Consensus 99 l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~ 178 (588)
T PRK13657 99 IIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMR 178 (588)
T ss_pred HHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887777777887877788888888899999888777777777777788888
Q ss_pred HHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000702 939 SSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFC- 1017 (1343)
Q Consensus 939 ~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~- 1017 (1343)
..++..+......+...+++.|+++|+.+||+|+.++.+.+++....+...+..........+.....+++..+...++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (588)
T PRK13657 179 KTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAIL 258 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888999999999999999999999999999999888888777666555555555444444333222222
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCC-CCCce
Q 000702 1018 MVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSW-PENGT 1096 (1343)
Q Consensus 1018 ~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~w-p~~g~ 1096 (1343)
++.......|.+++|.+..++.++..+..++..+...+..+.....+.+|+.++.+.+++.+.. . ... .+ +..+.
T Consensus 259 ~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~-~~~--~~~~~~~~ 334 (588)
T PRK13657 259 VLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-P-GAI--DLGRVKGA 334 (588)
T ss_pred HHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-C-CCC--CcCCCCCe
Confidence 2223334578899999999999999999999999999999999999999999988754432211 0 100 11 23467
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+|+||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+|
T Consensus 335 I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~ 413 (588)
T PRK13657 335 VEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAV 413 (588)
T ss_pred EEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEE
Confidence 9999999999753 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
|||||.+|+||||+||..+ ++.+|++++++++++++++++.++|+|+||.++|+|.+|||||||||||||||+++|+||
T Consensus 414 v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~il 493 (588)
T PRK13657 414 VFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPIL 493 (588)
T ss_pred EecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999876 467899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
|||||||+||++|++.|.+.|++..+++|+|+||||++++..||||++|++|+++|.|+|++|+++ ++.|++|+++.
T Consensus 494 iLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~ 570 (588)
T PRK13657 494 ILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQ 570 (588)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHh
Confidence 999999999999999999999988889999999999999999999999999999999999999975 69999999755
No 32
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.8e-73 Score=717.38 Aligned_cols=548 Identities=22% Similarity=0.292 Sum_probs=456.4
Q ss_pred HHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000702 783 LAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRA 862 (1343)
Q Consensus 783 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~ 862 (1343)
++.++..++.+..++.+....+.............++.+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~ 104 (576)
T TIGR02204 25 VALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISL 104 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34455555666666666544432110111111222333444444555666777888888899999999999999999999
Q ss_pred ccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 863 PMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRE 942 (1343)
Q Consensus 863 p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~ 942 (1343)
|.++|+..+.|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.++++..+++.+++..++.+..+.
T Consensus 105 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~ 184 (576)
T TIGR02204 105 SPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184 (576)
T ss_pred CHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888898999999999999999999998777666555555566666677777
Q ss_pred HHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000702 943 LVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCM-VLL 1021 (1343)
Q Consensus 943 l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~~ 1021 (1343)
..+..........+++.|+++|+++||+|+.++.+.+++.+..+...+..........|+......+..+...+.. +..
T Consensus 185 ~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 264 (576)
T TIGR02204 185 LSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGA 264 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777778888899999999999999999999999999999888877776665555555555544443332222211 122
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEE
Q 000702 1022 VSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELID 1101 (1343)
Q Consensus 1022 ~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~n 1101 (1343)
.....|.+++|.+..+..++..+..++..+...+.++.....+.+|+.++.+.++|.+... ...+..+|..+.|+|+|
T Consensus 265 ~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~~ 342 (576)
T TIGR02204 265 HDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA--HPKTLPVPLRGEIEFEQ 342 (576)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC--CCccCCcCCCceEEEEE
Confidence 2345788999999999999999999999999999999999999999999987665422111 11112234457899999
Q ss_pred EEEEEcCCC-CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCC
Q 000702 1102 LKVRYGENL-PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQD 1180 (1343)
Q Consensus 1102 vs~~Y~~~~-~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQd 1180 (1343)
|+|+|+++. +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|+|+|||
T Consensus 343 v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~ 422 (576)
T TIGR02204 343 VNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQD 422 (576)
T ss_pred EEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEccC
Confidence 999997543 5799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeC
Q 000702 1181 PNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDE 1259 (1343)
Q Consensus 1181 p~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDE 1259 (1343)
|++|+||||+||.+++ +.+|++++++++++++.+++.++|+|+||+++|+|.+||||||||++||||++++|+||||||
T Consensus 423 ~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililDE 502 (576)
T TIGR02204 423 PVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLDE 502 (576)
T ss_pred CccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 9999999999999754 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1260 ATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1260 aTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
|||+||.+|++.|.+.|++..+++|+|+||||++.+..||||++|++|+++|.|+|++|++ +++.|++|++.+
T Consensus 503 pts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~-~~~~~~~l~~~~ 575 (576)
T TIGR02204 503 ATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA-KGGLYARLARLQ 575 (576)
T ss_pred cccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH-cCChHHHHHhhc
Confidence 9999999999999999999888999999999999999999999999999999999999997 578999998753
No 33
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.8e-74 Score=657.33 Aligned_cols=513 Identities=25% Similarity=0.342 Sum_probs=407.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhH
Q 000702 815 PMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRL 894 (1343)
Q Consensus 815 ~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~ 894 (1343)
....+..|.+..+++.+|..++.+++.....++-+....+.++..++..++||....+|.+.+...+-...+...+...+
T Consensus 73 ~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V 152 (591)
T KOG0057|consen 73 ITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMV 152 (591)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999988888777777776666666
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCc
Q 000702 895 GGFASTTIQLVGIIGVMT-MVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQ 973 (1343)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~ 973 (1343)
..++..++.+......+. -..+.+.++.+..+..|..+..+..+.--+.++....+........-+++.+-++||+||.
T Consensus 153 ~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNn 232 (591)
T KOG0057|consen 153 FNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNN 232 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHccc
Confidence 555555554433332222 2233333333322222221111111111122233333444455667799999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000702 974 EKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWI 1052 (1343)
Q Consensus 974 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~ 1052 (1343)
|++..+++...+....++..........+.+--..+..+....+.++ +-....+.++.+.+.+..++..++..++..+-
T Consensus 233 E~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg 312 (591)
T KOG0057|consen 233 EEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLG 312 (591)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHH
Confidence 99999999998888877665555544444444444333322222222 12234567788888888888999999999998
Q ss_pred HHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcC
Q 000702 1053 LSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGR 1132 (1343)
Q Consensus 1053 ~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGr 1132 (1343)
..+.++-+.+.-.+-+....+.. .. ..+. +++.-...|.|+|+||+|.|+|+ ++||+|+||+|++||||||||+
T Consensus 313 ~vyr~~~q~l~Dm~~~~~l~~~~--~~--i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG~ 386 (591)
T KOG0057|consen 313 SVYRELRQALTDMRTLFILLEVD--ED--IQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVGS 386 (591)
T ss_pred HHHHHHHHHHHhHHHHHhhhhhh--hh--hhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEECC
Confidence 88888887776665544332211 10 0111 11222345779999999999976 4599999999999999999999
Q ss_pred CCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcC
Q 000702 1133 TGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQ 1211 (1343)
Q Consensus 1133 TGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~ 1211 (1343)
|||||||++++|+||++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++ ..+|||+.+++++++
T Consensus 387 nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~ 465 (591)
T KOG0057|consen 387 NGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAG 465 (591)
T ss_pred CCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcC
Confidence 99999999999999999 9999999999999999999999999999999999999999998765 689999999999999
Q ss_pred CchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000702 1212 LGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHR 1291 (1343)
Q Consensus 1212 L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHr 1291 (1343)
++|.+.++|+||+|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|+....++|+|+|+||
T Consensus 466 ~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~ 545 (591)
T KOG0057|consen 466 LHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHR 545 (591)
T ss_pred cHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred cccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcc
Q 000702 1292 IPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1292 l~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~ 1335 (1343)
++++++||+|+|||+|+|.|+|+|+||++ +.+.|+++|.....
T Consensus 546 l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 546 LDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQTS 588 (591)
T ss_pred chhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccccc
Confidence 99999999999999999999999999998 78899999876543
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-72 Score=708.33 Aligned_cols=511 Identities=21% Similarity=0.219 Sum_probs=431.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHH
Q 000702 818 LLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGF 897 (1343)
Q Consensus 818 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~ 897 (1343)
++.+++++.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+...+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34444444555566667777778888999999999999999999999999999999999999999999987777777777
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHH
Q 000702 898 ASTTIQLVGIIGVM-TMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKR 976 (1343)
Q Consensus 898 ~~~~~~~~~~~~~~-~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~ 976 (1343)
+..++..++.++++ ++++|++.++++..+++.+++.+.+.+..++..+......+.+.+.+.|+++|+++||+|+.++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 77766655555555 47888887776666666666666666666666677777788899999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 977 FMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAF-CMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSF 1055 (1343)
Q Consensus 977 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~ 1055 (1343)
+.+++.+..+...+..+.......+..........+...+ ..+.......|.++.|.+..+..|...+..++..+...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888776666554444444333333222221111 111122345788999999999999999999999999999
Q ss_pred HHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCC
Q 000702 1056 CKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGS 1135 (1343)
Q Consensus 1056 ~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGs 1135 (1343)
..+.....+.+|+.++.+.+++.+.. ....+ +..+.|+|+||+|+|+++..++|+|+||+|+|||++||||+|||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGs 352 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKDG--SEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGS 352 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCC--CCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCC
Confidence 99999999999999999766443211 01111 23568999999999986556799999999999999999999999
Q ss_pred CHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCch
Q 000702 1136 GKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGD 1214 (1343)
Q Consensus 1136 GKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~ 1214 (1343)
|||||+++|.|+++|++|+|++||+|+++++.+++|+++++|||+|++|+||||+||..+ .+.+|++++++++.+++++
T Consensus 353 GKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~ 432 (569)
T PRK10789 353 GKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHD 432 (569)
T ss_pred CHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999876 4689999999999999999
Q ss_pred HHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCccc
Q 000702 1215 IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPT 1294 (1343)
Q Consensus 1215 ~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~t 1294 (1343)
++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+++
T Consensus 433 ~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~ 512 (569)
T PRK10789 433 DILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSA 512 (569)
T ss_pred HHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred ccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1295 VIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1295 i~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
+..||+|++|++|+++|.|+|++|+++ ++.|++|++.+.
T Consensus 513 ~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 551 (569)
T PRK10789 513 LTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQ 551 (569)
T ss_pred HHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhh
Confidence 999999999999999999999999975 689999997653
No 35
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=5.1e-72 Score=703.01 Aligned_cols=550 Identities=21% Similarity=0.285 Sum_probs=446.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000702 781 IILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVF 860 (1343)
Q Consensus 781 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 860 (1343)
.+++.++..++.++.++.+++..+..... . ....++..++++.++..+..++...+....+.+...+++.+++++++
T Consensus 24 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~ 100 (585)
T TIGR01192 24 IVIANITLAAITIAEPILFGRIIDAISSK-S--DVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRII 100 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666777666555432111 1 11122222222333333334444444445555566667779999999
Q ss_pred ccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 861 RAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASS 940 (1343)
Q Consensus 861 ~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 940 (1343)
+.|++||+++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+.++++.++++++++...+.+..
T Consensus 101 ~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~ 180 (585)
T TIGR01192 101 SMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRT 180 (585)
T ss_pred cCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888888888888888888888899999998887777777777778888888
Q ss_pred HHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000702 941 RELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFC-MV 1019 (1343)
Q Consensus 941 r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~-~~ 1019 (1343)
++..+......+...+++.|+++|++|||+|+.++.+.+++.+..+...+..+.......+......++..+...++ .+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 260 (585)
T TIGR01192 181 KNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVI 260 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999988888777666554443333333333333322222111 11
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCC-CCceEE
Q 000702 1020 LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWP-ENGTIE 1098 (1343)
Q Consensus 1020 ~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp-~~g~I~ 1098 (1343)
.......|.++.|.+..++.|+..+..++..+...+.++.....+.+|+.+..+.+++.+.. ..+ ..++ ..+.|+
T Consensus 261 g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~~~-~~~~~~~~~i~ 336 (585)
T TIGR01192 261 GTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP---ADA-PELPNVKGAVE 336 (585)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---ccC-CCCCCCCCeEE
Confidence 22234578899999999999999999999999999999999999999999998765432211 111 1122 356799
Q ss_pred EEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeec
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIP 1178 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVp 1178 (1343)
|+||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+.+|+++++||
T Consensus 337 ~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~ 415 (585)
T TIGR01192 337 FRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATVF 415 (585)
T ss_pred EEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEEc
Confidence 99999999754 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEE
Q 000702 1179 QDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVL 1257 (1343)
Q Consensus 1179 Qdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlL 1257 (1343)
|||.+|++|+|+||..+ ++.+|++++++++.+++++++.++|+|+||.++|+|.+||||||||++|||||+++|+||||
T Consensus 416 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ilil 495 (585)
T TIGR01192 416 QDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILVL 495 (585)
T ss_pred cCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999876 45789999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhcccC
Q 000702 1258 DEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSSRS 1337 (1343)
Q Consensus 1258 DEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~~~~ 1337 (1343)
|||||+||.+|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ +|.|++|++.+....
T Consensus 496 DEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~~~ 574 (585)
T TIGR01192 496 DEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK-DGRFYKLLRRSGLLT 574 (585)
T ss_pred ECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-CChHHHHHHhCcccc
Confidence 9999999999999999999988889999999999999999999999999999999999999974 689999998875444
Q ss_pred CC
Q 000702 1338 SG 1339 (1343)
Q Consensus 1338 ~~ 1339 (1343)
+|
T Consensus 575 ~~ 576 (585)
T TIGR01192 575 NQ 576 (585)
T ss_pred CC
Confidence 43
No 36
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=7.2e-71 Score=707.80 Aligned_cols=542 Identities=22% Similarity=0.263 Sum_probs=445.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 124 SLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDIL 203 (1343)
Q Consensus 124 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 203 (1343)
.+++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRL 203 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34454477888899999999999999999999999999997753221 12233344445555555666666666677889
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 204 GMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHD-IWMLPLQIILALAILYKNVGIASVAT 281 (1343)
Q Consensus 204 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~-~~~~~~~i~~~~~~l~~~~g~~~l~~ 281 (1343)
+.++...++..+|+|+++++..++++.++|+++++++ |++.+.+++. .+.. +...++ +++++++++...++.+++.
T Consensus 204 ~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~ 281 (686)
T TIGR03797 204 ETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYYSWKLALVA 281 (686)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 8999987653 2223 333333 3445555555556666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 282 LIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFI 361 (1343)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~ 361 (1343)
++++++.+++..++.++.++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+........
T Consensus 282 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (686)
T TIGR03797 282 VALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLL 361 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777778888888999999999999999999999999999999999999888887776555444433333333222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 000702 362 TFIFWS--SPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDA 439 (1343)
Q Consensus 362 ~~~~~~--~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~ 439 (1343)
..+... ....+.++++|++.+..+.+|.|.++++.+++..+..|+..++..+..+++++++++|+.++++.+++.+..
T Consensus 362 ~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 362 TVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 222111 122334566788888899999999999999999999999999999999999999999999999876543221
Q ss_pred ccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----
Q 000702 440 TIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---- 515 (1343)
Q Consensus 440 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---- 515 (1343)
.. ........|+++|++|+|++ .++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 442 ~~--~~~~~~~~I~~~nvsf~Y~~-~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 518 (686)
T TIGR03797 442 KT--DPGKLSGAIEVDRVTFRYRP-DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLA 518 (686)
T ss_pred cC--CCCCCCceEEEEEEEEEcCC-CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcC
Confidence 11 11112346999999999864 346899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 ---------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 ---------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++||||+|++|++||+|||.+|++.+++++.++++.|+++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 519 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRia 598 (686)
T TIGR03797 519 GLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLL 598 (686)
T ss_pred cCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 48999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
||||++++|+++|||||||+||+++++++.+.+ +.. ++|+|+||||++.++.||+|++|++|+++++|+|+|+++.+
T Consensus 599 lARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~ 675 (686)
T TIGR03797 599 IARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMARE 675 (686)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999988764 433 68999999999999999999999999999999999999988
Q ss_pred ccHHHHHH
Q 000702 667 TDFNALVS 674 (1343)
Q Consensus 667 ~~~~~~~~ 674 (1343)
+.|.++++
T Consensus 676 ~~y~~l~~ 683 (686)
T TIGR03797 676 GLFAQLAR 683 (686)
T ss_pred cHHHHHHH
Confidence 88888764
No 37
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.8e-72 Score=696.95 Aligned_cols=518 Identities=21% Similarity=0.282 Sum_probs=429.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhcCCCCC-CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000702 782 ILAQVLFQFLQIASNWWMAWANPQTE-GDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVF 860 (1343)
Q Consensus 782 ~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl 860 (1343)
+++.++..++.++.++.+++..+... ..........+.+.++++.++..++.+++.++....+.+...+++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~ 88 (529)
T TIGR02857 9 GLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVA 88 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666666776666554321 11111112334455556666677888889999999999999999999999999
Q ss_pred ccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 861 RAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASS 940 (1343)
Q Consensus 861 ~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 940 (1343)
+.|..+|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..+++..++..++.+..
T Consensus 89 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~ 168 (529)
T TIGR02857 89 ALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAA 168 (529)
T ss_pred hCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888888888888888999999877666555444444444455555
Q ss_pred HHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000702 941 RELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCM-V 1019 (1343)
Q Consensus 941 r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~ 1019 (1343)
+...+......+...+++.|+++|+++||+|+.|+++.+++.+..+...+..........+......++..+...++. +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (529)
T TIGR02857 169 QAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVY 248 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666677788999999999999999999999999999888887776666555555655555554443332221 1
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEE
Q 000702 1020 LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIEL 1099 (1343)
Q Consensus 1020 ~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f 1099 (1343)
.......|.++.|.+..++.|+..+..++..+...+..+.....+.+|+.++.+.+++... . .+...+..+.|+|
T Consensus 249 ~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~--~~~~~~~~~~i~~ 323 (529)
T TIGR02857 249 IGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---K--APVTAAPAPSLEF 323 (529)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---C--cCCCCCCCCeEEE
Confidence 1222237889999988899999999999999999999999999999999999975433221 1 1111223468999
Q ss_pred EEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecC
Q 000702 1100 IDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQ 1179 (1343)
Q Consensus 1100 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQ 1179 (1343)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|+++++|||
T Consensus 324 ~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q 403 (529)
T TIGR02857 324 SGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQ 403 (529)
T ss_pred EEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcC
Confidence 99999998665579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEe
Q 000702 1180 DPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLD 1258 (1343)
Q Consensus 1180 dp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLD 1258 (1343)
||.+|+|||||||..+ ++.+|++++++++.+++++++.++|+||||+++|+|.+||||||||++||||++++|+|||||
T Consensus 404 ~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililD 483 (529)
T TIGR02857 404 HPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLD 483 (529)
T ss_pred CCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999875 467999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEE
Q 000702 1259 EATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVL 1304 (1343)
Q Consensus 1259 EaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl 1304 (1343)
||||+||++|++.|++.|++..+++|+|+||||++++..||||+||
T Consensus 484 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 484 EPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999988899999999999999999999986
No 38
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1e-70 Score=709.70 Aligned_cols=544 Identities=18% Similarity=0.235 Sum_probs=452.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 124 SLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDIL 203 (1343)
Q Consensus 124 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 203 (1343)
..++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...++
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556677888888888899999999999999999999997653321 11233344445555566666666666777889
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 204 GMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATL 282 (1343)
Q Consensus 204 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~ 282 (1343)
+.++...++..+|+|+++++..++++.++|+++++++.| +.+.+++. .+..++...+.+++.+++++...++.+++.+
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 300 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 67877653 4445555555566666666666666666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 283 IATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFIT 362 (1343)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~ 362 (1343)
+.+++.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++.+.++.+...+.........
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777788888888999999999999999999999999999999999999999998887776665544443333322
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 000702 363 FIFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDAT 440 (1343)
Q Consensus 363 ~~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~ 440 (1343)
.+.. .....+.++++|++.+..+.+|+|.++++..++..+..|+..++..+..++++.++++|+.++++.+++.+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 2211 11223445678888888999999999999999999999999999999999999999999999998765432211
Q ss_pred ------cccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEEC
Q 000702 441 ------IVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLC 514 (1343)
Q Consensus 441 ------~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~ 514 (1343)
...+.....+.|+++|++|+|++ .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSP-LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCC-CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 00010112346999999999864 34689999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChH
Q 000702 515 G-------------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGG 580 (1343)
Q Consensus 515 g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgG 580 (1343)
| .++||||+|++|++||||||.++.+ .+++++.++++.+++++++..+|+|++|.+||+|.+||||
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGG 619 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGG 619 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHH
Confidence 8 4899999999999999999998864 7889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChH
Q 000702 581 QKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 581 QkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||||+||||++++|+|+|||||||+||+++++++++.+.. .++|+|+||||++.+..||+|++|++|++++.|+|+
T Consensus 620 QrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 620 QRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999876533 589999999999999999999999999999999999
Q ss_pred HHHhcCccHHHHH
Q 000702 661 DLLQAGTDFNALV 673 (1343)
Q Consensus 661 ~l~~~~~~~~~~~ 673 (1343)
|+++.++.|.+++
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9998888887764
No 39
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.7e-73 Score=630.93 Aligned_cols=489 Identities=23% Similarity=0.359 Sum_probs=415.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHH-HHHHHHH
Q 000702 838 VLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIG-VMTMVTW 916 (1343)
Q Consensus 838 ~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~ 916 (1343)
.++...+..+-+.+--+.+.++.+..+.|+-+..+|-+..-...-..-|+..+...+...+..++.+...++ +....+|
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 445566777788888889999999999999888777554444444444444455555666666665544433 3445678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHH
Q 000702 917 QVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSL 996 (1343)
Q Consensus 917 ~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~ 996 (1343)
++..+.+..+++|.++......-.-..+|....+.+...+.-.++|-..+|++.|+.|+.+..++...++.+.++....+
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 88877777776666654444444445566666677777788889999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Q 000702 997 AAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIP 1075 (1343)
Q Consensus 997 ~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~ 1075 (1343)
.+..|+++--..+..........+ ...+..|.++.|.+.+...+..++..+++.+...+.++.+.....|+..+..+.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 888888777666555433333222 2335578899999999999999999999999999999999999999999998776
Q ss_pred CCCCCCCCCCCCCCCCC-CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcce
Q 000702 1076 GEAPPVIEDSRPPSSWP-ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGR 1154 (1343)
Q Consensus 1076 ~e~~~~~~~~~~~~~wp-~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~ 1154 (1343)
.|.. +....|+-|| ..|.|.|+||+|.|.+.. ++|+|+||++++|+++||||++|+||||+.++|+|||++++|+
T Consensus 244 ~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r-~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~ 319 (497)
T COG5265 244 AEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRR-PILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGS 319 (497)
T ss_pred hhhc---cCCCCccccccccceEEEEEEEeeccccc-hhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCce
Confidence 5532 2233455675 458899999999999875 5999999999999999999999999999999999999999999
Q ss_pred EEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1155 IIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1155 I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
|.|||+||+++..+.||+.||+||||.+||++|+..|+.+. .+.+++|++.|++.++++++|+++|+||||+|||.|-.
T Consensus 320 I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglk 399 (497)
T COG5265 320 ITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLK 399 (497)
T ss_pred EEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheee
Confidence 99999999999999999999999999999999999999876 46899999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeec
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g 1313 (1343)
||||||||+++||++|++|+||+||||||+||..||+.||.+|++.++++|.++|||||+||.++|.|+||++|+|+|.|
T Consensus 400 lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg 479 (497)
T COG5265 400 LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERG 479 (497)
T ss_pred ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCcHHHHHHH
Q 000702 1314 TPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1314 ~p~eLl~~~~~~f~~l~~ 1331 (1343)
+|+||+++ +|.|++||.
T Consensus 480 ~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 480 THEELLAA-GGLYAEMWR 496 (497)
T ss_pred cHHHHHHc-CChHHHHhc
Confidence 99999986 899999985
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.9e-70 Score=702.79 Aligned_cols=542 Identities=21% Similarity=0.272 Sum_probs=435.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
++.+++.+++.++...++.++..++.++.|++++.++|.+....+.. .....++.+++..++..++.....+...+.+.
T Consensus 152 l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 230 (711)
T TIGR00958 152 LLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPP-ALASAIFFMCLLSIASSVSAGLRGGSFNYTMA 230 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456677888888889999999999999999999999886432211 11111222222333333443333334456777
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
++...++..+|+|+++.+..++++.++|+++|++++|++.+.+.+. .+..++...+.+++++++++...+..+++.++.
T Consensus 231 ~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~ 310 (711)
T TIGR00958 231 RINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLIN 310 (711)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 8888899999999999999999999999999999999999987654 556666666677766666665555555555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 285 TIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFI 364 (1343)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~ 364 (1343)
+++.+.+...+.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++..++..+..++...........
T Consensus 311 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (711)
T TIGR00958 311 LPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWT 390 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677888888888888999999999999999999999999999999877666655443333222222221211111
Q ss_pred H--HHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 000702 365 F--WSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIV 442 (1343)
Q Consensus 365 ~--~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~ 442 (1343)
. ......+.++.++.+.+..+.+|+|.+++++.+...+..|+..++..+..++++.++.+|+.++++.++..+.....
T Consensus 391 ~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 470 (711)
T TIGR00958 391 TSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTL 470 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 1 11112334566788888899999999999999999999999999999999999999999999999876543221111
Q ss_pred cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------
Q 000702 443 LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------- 515 (1343)
Q Consensus 443 ~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------- 515 (1343)
.+ ......|+++|++|+|++.+++++|+|+||+|+|||+++||||||||||||+++|+|+++|++|+|.+||
T Consensus 471 ~~-~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~ 549 (711)
T TIGR00958 471 AP-LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYD 549 (711)
T ss_pred CC-CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcC
Confidence 11 1123469999999999754456899999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
.++||+|+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+||
T Consensus 550 ~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalA 629 (711)
T TIGR00958 550 HHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIA 629 (711)
T ss_pred HHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHH
Confidence 4899999999999999999999965 678899999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCcc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTD 668 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 668 (1343)
||++++|+|+|||||||+||+++++.+.+ ....+++|+|+||||++.+..||+|++|++|+|+++|+|+|++++++.
T Consensus 630 RALl~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~ 706 (711)
T TIGR00958 630 RALVRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGC 706 (711)
T ss_pred HHHhcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCc
Confidence 99999999999999999999999888876 223478999999999999999999999999999999999999988776
Q ss_pred HHHH
Q 000702 669 FNAL 672 (1343)
Q Consensus 669 ~~~~ 672 (1343)
|.++
T Consensus 707 y~~l 710 (711)
T TIGR00958 707 YKHL 710 (711)
T ss_pred hHhc
Confidence 6653
No 41
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.4e-70 Score=702.40 Aligned_cols=537 Identities=25% Similarity=0.331 Sum_probs=444.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 123 PSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDI 202 (1343)
Q Consensus 123 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 202 (1343)
...++.+++.+++.+....++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677788899999999999999999999999999999997653221 1123334444444455566666666666788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YL-HDIWMLPLQIILALAILYKNVGIASVA 280 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~-~~~~~~~~~i~~~~~~l~~~~g~~~l~ 280 (1343)
++.++...++..+|+|+++++..+ .+.++|++++++ +|++.+.+++. .+ ..+...++ +++.+++++...++.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPF-ALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999987 678999999999 79999998654 22 23333333 444444555555566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 281 TLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF 360 (1343)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 360 (1343)
.++++++++++..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777778888899999999999999999999999999999999999999999998888777665554444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 000702 361 ITFIFWSS--PIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQED 438 (1343)
Q Consensus 361 ~~~~~~~~--~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~ 438 (1343)
...+.... ...+.++++|++.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++++|+.++++.+++.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 22222111 1233456778888889999999999999999999999999999999999999999999999987654322
Q ss_pred cccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---
Q 000702 439 ATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--- 515 (1343)
Q Consensus 439 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--- 515 (1343)
.....+.....+.|+++|++|+|++ .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 451 ~~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 451 GTRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred CCCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1111111112346999999999953 346899999999999999999999999999999999999999999999998
Q ss_pred ----------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 ----------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 ----------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++||+|+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 4899999999999999999999987 78999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
++||||++++|+++|||||||+||+++++++.+. +....+++|+|+||||++.+..||+|++|++|+++++|+|+|+++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 9999999999999999999999999999988765 566667999999999999999999999999999999999999975
Q ss_pred c
Q 000702 665 A 665 (1343)
Q Consensus 665 ~ 665 (1343)
.
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 3
No 42
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.7e-69 Score=697.59 Aligned_cols=541 Identities=22% Similarity=0.292 Sum_probs=439.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 125 LALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILG 204 (1343)
Q Consensus 125 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 204 (1343)
.++.+++.+++.++...++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (708)
T TIGR01193 146 KFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLG 224 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888888888888999999999999999999997653221 112233334444445555666655566677889
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 205 MHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLI 283 (1343)
Q Consensus 205 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~ 283 (1343)
.++...++..+|+|+++++..++++.++|+++++++ |++.+.+++. .........+.+++++++++...++.+++.++
T Consensus 225 ~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 303 (708)
T TIGR01193 225 QRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLL 303 (708)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999999999999999999999999999999999998 9999987653 23333333333334444444444445555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q 000702 284 ATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQ----A 359 (1343)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~----~ 359 (1343)
++++++.+...+.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..... .
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (708)
T TIGR01193 304 SIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQA 383 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666667777888889999999999999999999999999999999999999888887766554443333222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 000702 360 FITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDA 439 (1343)
Q Consensus 360 ~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~ 439 (1343)
+..++.. ...+.++++|++.+..+.+|+|.++++..++..+..|+..+...+..+++++++++|+.++++.+++.+..
T Consensus 384 ~~~~~~~--~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 461 (708)
T TIGR01193 384 IKAVTKL--ILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINK 461 (708)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc
Confidence 2222211 22344567889999999999999999999999999999999999999999999999999999876543221
Q ss_pred ccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----
Q 000702 440 TIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---- 515 (1343)
Q Consensus 440 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---- 515 (1343)
....+.....+.|+++|++|+|++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 462 ~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 539 (708)
T TIGR01193 462 KKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLK 539 (708)
T ss_pred ccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHH
Confidence 110111122346999999999853 46899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEcccccccCccHHHHhccCC--CCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 ---------TAAYVSQSAWIQSGNIEENILFGS--PMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 ---------~i~~v~Q~~~l~~~ti~~Ni~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++||||+|++|++||+|||.+|. ..+++++.++++.++++++++.+|+|++|.+||+|.+||||||||
T Consensus 540 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQR 619 (708)
T TIGR01193 540 DIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQR 619 (708)
T ss_pred HcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHH
Confidence 489999999999999999999983 477889999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|+||||++++|+++|||||||+||+++++++.+.+. . .+++|+|+||||++.+..||+|++|++|++++.|+|+|+++
T Consensus 620 ialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~-~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 620 IALARALLTDSKVLILDESTSNLDTITEKKIVNNLL-N-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred HHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHH-H-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999998877654 4 37899999999999999999999999999999999999998
Q ss_pred cCccHHHHH
Q 000702 665 AGTDFNALV 673 (1343)
Q Consensus 665 ~~~~~~~~~ 673 (1343)
.++.|.+++
T Consensus 698 ~~~~y~~l~ 706 (708)
T TIGR01193 698 RNGFYASLI 706 (708)
T ss_pred cCCcHHHHh
Confidence 888887765
No 43
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-68 Score=676.02 Aligned_cols=546 Identities=18% Similarity=0.228 Sum_probs=440.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 125 LALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILG 204 (1343)
Q Consensus 125 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 204 (1343)
.++.+++.+++.++...++.++..++..+.|++++.+++.+..... ......+++++++..++..++.....+...+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 15 RLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD-RSVLKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677788888888888888888888999999999987654221 111112222233344444455555445567788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 205 MHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLI 283 (1343)
Q Consensus 205 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~ 283 (1343)
.++...++..+|+|.++++...+.+.+.|++++++++|++.+.+.+. .+..++..++.+++++++++...++.+++.++
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 173 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIV 173 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999987543 45556666666777766666555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 284 ATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITF 363 (1343)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~ 363 (1343)
++++.+++...+.++.++..++.++..++..+...|.++|+++||.++.|+.+.+++++..+.-.+...+..........
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T PRK11176 174 IAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDP 253 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666778888888889999999999999999999999999999999888777776554433333332222222111
Q ss_pred HHH--HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 000702 364 IFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATI 441 (1343)
Q Consensus 364 ~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~ 441 (1343)
+.. .....+.++.++.+.+..+.+|+|.+.++.+++..+..|+..+...+..+.+++.+++|+.++++.++..+....
T Consensus 254 ~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~ 333 (582)
T PRK11176 254 IIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc
Confidence 111 112233445677777788999999999999999999999999999999999999999999999987654321111
Q ss_pred ccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------
Q 000702 442 VLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------ 515 (1343)
Q Consensus 442 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------ 515 (1343)
. .......|+++|++|+|++ .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 334 ~--~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~ 410 (582)
T PRK11176 334 V--IERAKGDIEFRNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDY 410 (582)
T ss_pred C--CCCCCCeEEEEEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhc
Confidence 1 1112236999999999854 346899999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEcccccccCccHHHHhccCCC--CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 -------TAAYVSQSAWIQSGNIEENILFGSP--MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 -------~i~~v~Q~~~l~~~ti~~Ni~~g~~--~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++||||+|++|++||+|||.+|.+ +++++++++++.++++++++.+|+|++|.+||+|.+||||||||++
T Consensus 411 ~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~ 490 (582)
T PRK11176 411 TLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIA 490 (582)
T ss_pred CHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHH
Confidence 3799999999999999999999853 7899999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
||||++++|+|+|||||||+||+++++.+++. +....+++|+|+||||++.++.||+|++|++|++++.|+|+++++.+
T Consensus 491 LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~ 569 (582)
T PRK11176 491 IARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN 569 (582)
T ss_pred HHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999988765 45555789999999999999999999999999999999999999988
Q ss_pred ccHHHHHHH
Q 000702 667 TDFNALVSA 675 (1343)
Q Consensus 667 ~~~~~~~~~ 675 (1343)
+.|.+++..
T Consensus 570 ~~y~~l~~~ 578 (582)
T PRK11176 570 GVYAQLHKM 578 (582)
T ss_pred ChHHHHHHH
Confidence 888888753
No 44
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.9e-69 Score=674.99 Aligned_cols=527 Identities=18% Similarity=0.205 Sum_probs=423.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000702 782 ILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFR 861 (1343)
Q Consensus 782 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~ 861 (1343)
+++.++..++.++.++.++...+.............+..+++++.++..++.+++.++....+.+....++.++++++++
T Consensus 12 ~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 91 (544)
T TIGR01842 12 GLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFS 91 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33445555666666766665554221111111223344445555566677788888889999999999999999999999
Q ss_pred cccccccccChhhhHHHHhhhhhhhcccchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 862 APMSFFDSTPAGRILNRVSIDQSVVDLDIPF-RLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASS 940 (1343)
Q Consensus 862 ~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 940 (1343)
.|+.. .|..++++++|++.+...+.. .+..++..++.++. ++++++++|++.++++..+++++.+..++.+..
T Consensus 92 ~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~ 165 (544)
T TIGR01842 92 ATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRAT 165 (544)
T ss_pred CcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 99843 366789999999999987766 44555555554443 456788888877665544444444444555555
Q ss_pred HHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000702 941 RELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFA-FCMV 1019 (1343)
Q Consensus 941 r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~ 1019 (1343)
++..+......+...+++.|+++|+++||+|+.++.+.+++.+..++..+..........+......++..+... +..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (544)
T TIGR01842 166 KKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGL 245 (544)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566677788889999999999999999999999999998888877666555444443333333333222211 1112
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEE
Q 000702 1020 LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIEL 1099 (1343)
Q Consensus 1020 ~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f 1099 (1343)
.......|.+++|.+..++.+...+..++..+...+..+.....+.+|+.++.+.+++.+.. ...+ +..+.|++
T Consensus 246 g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~---~~~~~i~~ 319 (544)
T TIGR01842 246 GAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---MPLP---EPEGHLSV 319 (544)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---CCCC---CCCCeEEE
Confidence 22334578899999999999999999999999999999999999999999999766553211 1111 23468999
Q ss_pred EEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecC
Q 000702 1100 IDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQ 1179 (1343)
Q Consensus 1100 ~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQ 1179 (1343)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.+|+++++|||
T Consensus 320 ~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q 399 (544)
T TIGR01842 320 ENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQ 399 (544)
T ss_pred EEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecC
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEe
Q 000702 1180 DPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLD 1258 (1343)
Q Consensus 1180 dp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLD 1258 (1343)
||.+|++|+|+|+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 400 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililD 479 (544)
T TIGR01842 400 DVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLD 479 (544)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999998654 48999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhh
Q 000702 1259 EATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1259 EaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
||||+||.+|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 480 Epts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 480 EPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999875 5799999999999999999999999999999999999985
No 45
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-70 Score=646.65 Aligned_cols=465 Identities=26% Similarity=0.401 Sum_probs=358.3
Q ss_pred eEEEEeeEEEecCCCC-CCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCC----CcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSS-RPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKI----SGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~-~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~----~G~i~~~g---------- 515 (1343)
.++++|++..|...+. ..+++||||++.+||.+||||+|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999988875532 25999999999999999999999999999999999999987 89999887
Q ss_pred -------eEEEEccccc-ccC--ccHHHHh----ccCCCCC-HHHHH---HHHHHhhhhhhHhhccCCCccccCCCCCCC
Q 000702 516 -------TAAYVSQSAW-IQS--GNIEENI----LFGSPMD-KAKYK---KVIHACSLKKDLELFSHGDQTIIGDRGINL 577 (1343)
Q Consensus 516 -------~i~~v~Q~~~-l~~--~ti~~Ni----~~g~~~~-~~~~~---~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 577 (1343)
.|||++|+|+ .+| .||.+-| ....+.+ ++..+ +.++..++.+. ... ......|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~-------~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDP-------ERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCCh-------hhh--ccCCccc
Confidence 3899999986 333 3554444 3333221 22222 33333333322 211 4567899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000702 578 SGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRII 654 (1343)
Q Consensus 578 SgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~ 654 (1343)
||||||||.||+||..+|++||+||||+|||+.+..+|++. ++.+. .|.++|+|||++..+.. ||+|+||++|+++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~l-lk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV 234 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDL-LKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIV 234 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHH-HHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999875 44433 58999999999999875 9999999999999
Q ss_pred EecChHHHHhcCcc-HHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHH
Q 000702 655 QAGKYDDLLQAGTD-FNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQK 733 (1343)
Q Consensus 655 ~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1343)
|.|+.++++++... |.+..
T Consensus 235 E~G~~~~i~~~p~hpYT~~L------------------------------------------------------------ 254 (539)
T COG1123 235 ETGPTEEILSNPQHPYTRGL------------------------------------------------------------ 254 (539)
T ss_pred EecCHHHHHhccCCcccHHH------------------------------------------------------------
Confidence 99999998753110 00000
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCC
Q 000702 734 AIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKV 813 (1343)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 813 (1343)
+.+ .+..
T Consensus 255 -----------------------------------l~a--------------------------------------~p~~ 261 (539)
T COG1123 255 -----------------------------------LAA--------------------------------------VPRL 261 (539)
T ss_pred -----------------------------------Hhh--------------------------------------CCCc
Confidence 000 0000
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhh
Q 000702 814 NPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFR 893 (1343)
Q Consensus 814 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~ 893 (1343)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCc
Q 000702 894 LGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQ 973 (1343)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~ 973 (1343)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 974 EKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWIL 1053 (1343)
Q Consensus 974 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~ 1053 (1343)
T Consensus 262 -------------------------------------------------------------------------------- 261 (539)
T COG1123 262 -------------------------------------------------------------------------------- 261 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcC---------CCCcccccceeEecCC
Q 000702 1054 SFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGE---------NLPLVLHGITCAFPGG 1124 (1343)
Q Consensus 1054 ~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vL~~is~~I~~G 1124 (1343)
..+... .......-+....++++|++.+|.. ....+++||||++++|
T Consensus 262 ---------------------~~~~~~---~~~~~~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~G 317 (539)
T COG1123 262 ---------------------GDEKII---RLPRRGPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREG 317 (539)
T ss_pred ---------------------cccccc---ccccccccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCC
Confidence 000000 0000000002235899999999974 1246899999999999
Q ss_pred CEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCee--cCCCChHHHhhcceeecCCcccc---CCchhhhcC-CCC--
Q 000702 1125 KKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNID--ISTIGLHDLRSRLGIIPQDPNLF---EGTIRCNLD-PLE-- 1196 (1343)
Q Consensus 1125 ekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~d--i~~i~l~~LR~~i~iVpQdp~lF---~gTIr~NLd-p~~-- 1196 (1343)
|++||||.||||||||.++|+|+++|++|+|.++|.| .+.-....+|+++-+|+|||+-. ..||+++|. |..
T Consensus 318 E~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~ 397 (539)
T COG1123 318 ETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIH 397 (539)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhh
Confidence 9999999999999999999999999999999999977 33333556888999999999743 359999985 332
Q ss_pred -CC----CHHHHHHHHHHcCCch-HHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Q 000702 1197 -EH----SDREIWEALDKSQLGD-IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDN 1270 (1343)
Q Consensus 1197 -~~----sd~ei~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~ 1270 (1343)
.. ..+.+-+.|++++|.+ +..+.| ..||||||||+||||||..+|++||+|||||+||+-+.+
T Consensus 398 ~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa 466 (539)
T COG1123 398 GGGSGAERRARVAELLELVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQA 466 (539)
T ss_pred cccchHHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHH
Confidence 11 1234777899999986 454444 468999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1271 LIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1271 ~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
.|.+.|.+.-+ +.|.|+|||++..+.. ||||+||++|+|||.|+.+++.+++...|.+...+.
T Consensus 467 ~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 467 QVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLAA 532 (539)
T ss_pred HHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 99999887543 6899999999999987 999999999999999999999999887776665543
No 46
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.5e-68 Score=668.96 Aligned_cols=544 Identities=21% Similarity=0.268 Sum_probs=431.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHE-GYILAGIFFSAKLVETITTRQWYLGVDILG 204 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 204 (1343)
+..+++.+++.++...++.++..++..+.|+++..++|.+......... ...+++++++..++..++.....+...+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456677888888888899999999999999999999976432221111 112222333344445555555566677888
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 205 MHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLI 283 (1343)
Q Consensus 205 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~ 283 (1343)
.++...++..+|+|.++++...+++.++|+++|++++|++.+.+.+. .+..+....+.+++++++++...++.+++.++
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~ 173 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999988654 33444444444444444444433344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000702 284 ATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF--- 360 (1343)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~--- 360 (1343)
++++.+++..+..++.++..++..+..++..+.+.|.++|+++||.|+.|+.+.+++.+..++..+...+.......
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555566667777778888888888899999999999999999999998888877655433332222111111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 000702 361 -ITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDA 439 (1343)
Q Consensus 361 -~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~ 439 (1343)
...+......++ ++.++.+ +..+.++.|.+++++.++..+..|+..++..+..+.++..+.+|+.++++.++.+...
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 011111111111 1222223 4678899999999999999999999999999999999999999999999866432211
Q ss_pred ccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe---
Q 000702 440 TIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--- 516 (1343)
Q Consensus 440 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--- 516 (1343)
. .. ......|+++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 332 ~-~~--~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~ 406 (592)
T PRK10790 332 D-DR--PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLS 406 (592)
T ss_pred C-cc--CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhh
Confidence 1 11 112346999999999863 357999999999999999999999999999999999999999999999983
Q ss_pred ----------EEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 517 ----------AAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 517 ----------i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
++||||+|++|++||+|||.+|++.++++..+++++++++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 407 ~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRia 486 (592)
T PRK10790 407 SLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLA 486 (592)
T ss_pred hCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 8999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
||||++++|+|+|||||||+||+++++++.+. +....+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.+
T Consensus 487 lARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~ 565 (592)
T PRK10790 487 LARVLVQTPQILILDEATANIDSGTEQAIQQA-LAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ 565 (592)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999888655 55556789999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHH
Q 000702 667 TDFNALVSAHH 677 (1343)
Q Consensus 667 ~~~~~~~~~~~ 677 (1343)
+.|.++++.+.
T Consensus 566 ~~y~~l~~~~~ 576 (592)
T PRK10790 566 GRYWQMYQLQL 576 (592)
T ss_pred CHHHHHHHHHh
Confidence 99998876543
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=8.2e-68 Score=668.49 Aligned_cols=544 Identities=20% Similarity=0.250 Sum_probs=448.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
++.+++.+++.++++.++.++..++....|++++.+++....... ....+.+++++++..++..++.....+...+.+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677888899999999999999999999999999986543221 1112222333444445555555555566788899
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
++...++..+|+|.++.+.+.+++.+.|++++++++|++++.+++. .+..++...+.++++++++++.-++.+++.+++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~ 163 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVM 163 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988654 455666666666666666666555555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 285 TIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFI 364 (1343)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~ 364 (1343)
+++++.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (571)
T TIGR02203 164 LPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPI 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777778888899999999999999999999999999999999999999888887776655544433333322222222
Q ss_pred HHH--HHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 000702 365 FWS--SPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIV 442 (1343)
Q Consensus 365 ~~~--~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~ 442 (1343)
... ....+.++.++++.+..+.+|+|.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+.....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 323 (571)
T TIGR02203 244 TQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTRA 323 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Confidence 111 112334566778888899999999999999999999999999999999999999999999999876543321111
Q ss_pred cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------
Q 000702 443 LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------- 515 (1343)
Q Consensus 443 ~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------- 515 (1343)
.......++++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 324 --~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 324 --IERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred --CCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 11123469999999998643 46899999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEcccccccCccHHHHhccCC--CCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGS--PMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~--~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++||||+|++|++|+||||.++. +.++++++++++.|++++++..+|+|++|.+|++|.+|||||||||+|
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL 480 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI 480 (571)
T ss_pred HHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 389999999999999999999996 488999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGT 667 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 667 (1343)
|||++++|+|++||||||+||+++++++.+. +....+++|+|+|||+++.+..||+|++|++|++++.|+|+++++..+
T Consensus 481 ARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~ 559 (571)
T TIGR02203 481 ARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNG 559 (571)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCC
Confidence 9999999999999999999999999998765 455567899999999999999999999999999999999999998777
Q ss_pred cHHHHHH
Q 000702 668 DFNALVS 674 (1343)
Q Consensus 668 ~~~~~~~ 674 (1343)
.|.++..
T Consensus 560 ~~~~~~~ 566 (571)
T TIGR02203 560 LYAQLHN 566 (571)
T ss_pred HHHHHHH
Confidence 7776543
No 48
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.6e-69 Score=726.72 Aligned_cols=513 Identities=19% Similarity=0.257 Sum_probs=427.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHH
Q 000702 817 VLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGG 896 (1343)
Q Consensus 817 ~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~ 896 (1343)
.+...+++++++..++.+++.+++...+.+..++++.++++++++.|++|||..+.|++.+|++.|++.+...+...+..
T Consensus 98 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~ 177 (1466)
T PTZ00265 98 DIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFIT 177 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666677778888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHH
Q 000702 897 FASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKR 976 (1343)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~ 976 (1343)
++..++.+++.++++++.+|.+.++++.++++++++..++.+..+...+......+...+.+.|+++|++|||+|+.|++
T Consensus 178 ~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 257 (1466)
T PTZ00265 178 IFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKT 257 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHH
Confidence 99999999999999999999998887777777666666677776777777777778899999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcC--------CCCCHHHHHHHHHHHHHHHHH
Q 000702 977 FMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPH--------GAIDPSMAGLAVTYGLNLNAR 1047 (1343)
Q Consensus 977 ~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~--------g~~~~~~~gl~l~~~~~~~~~ 1047 (1343)
+.+++.+..+...+..........+......++..+..+++..+ ...... +.+++|.+...+.+.+.....
T Consensus 258 ~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~ 337 (1466)
T PTZ00265 258 ILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFM 337 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHH
Confidence 99999888777766655544433333333333222111111111 111112 245666555444444443444
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCC-CcccccceeEecCCCE
Q 000702 1048 LSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENL-PLVLHGITCAFPGGKK 1126 (1343)
Q Consensus 1048 l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~is~~I~~Gek 1126 (1343)
+..+...+..+.....|.+|+.+.++.+++.+.. .. ....|..+.|+|+||+|+|+... .++|+|+||+|++||+
T Consensus 338 l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~ 413 (1466)
T PTZ00265 338 LTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKT 413 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCE
Confidence 5566677888899999999999999866553211 11 11123335799999999997532 4699999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccCCCcceEEE-cCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC---------
Q 000702 1127 IGIVGRTGSGKSTLIQALFRLIEPACGRIII-DNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE--------- 1196 (1343)
Q Consensus 1127 vgIVGrTGsGKSTLl~~L~rl~~~~~G~I~I-dG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~--------- 1196 (1343)
+||||+||||||||+++|.|+|+|++|+|++ ||.|+++++.+++|++|++|||+|.||++||++||....
T Consensus 414 vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~ 493 (1466)
T PTZ00265 414 YAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEAL 493 (1466)
T ss_pred EEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchh
Confidence 9999999999999999999999999999999 579999999999999999999999999999999997521
Q ss_pred -------------------------------------------------CCCHHHHHHHHHHcCCchHHhcccCCCCccc
Q 000702 1197 -------------------------------------------------EHSDREIWEALDKSQLGDIVRGKDQKLETPV 1227 (1343)
Q Consensus 1197 -------------------------------------------------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v 1227 (1343)
+.+|+++++|++.+++++++.++|+||||.+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~v 573 (1466)
T PTZ00265 494 SNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLV 573 (1466)
T ss_pred ccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCcee
Confidence 2567899999999999999999999999999
Q ss_pred ccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEEEe
Q 000702 1228 LENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLVLS 1305 (1343)
Q Consensus 1228 ~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~ 1305 (1343)
+++|.+||||||||++|||||+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||+
T Consensus 574 g~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~ 653 (1466)
T PTZ00265 574 GSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLS 653 (1466)
T ss_pred CCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999875 4899999999999999999999999
Q ss_pred CC-----------------------------------------------EEeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1306 DG-----------------------------------------------RVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1306 ~G-----------------------------------------------~ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
+| +|+|+|+|+||+++++|.|+.|++.+
T Consensus 654 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 654 NRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 86 59999999999987789999999664
No 49
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-67 Score=617.72 Aligned_cols=529 Identities=25% Similarity=0.346 Sum_probs=434.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 139 LNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAMVYRK 218 (1343)
Q Consensus 139 ~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~K 218 (1343)
+..++.++..++...+-+++..+++.+-.... ....+.++++++++.++.+++.+......++.+.++|..||..+++|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666677777777777777776544331 22344566677778888888888888888999999999999999999
Q ss_pred HhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 219 GLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWM---LPLQIILALAILYKNVGIASVATLIATIISIVVTVP 294 (1343)
Q Consensus 219 ~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~---~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~~~~~ 294 (1343)
..++++.+..+.++|++.++++.-++.+..++. |+..... .|+.++++++.+ -..++++-++.++++.++.+.
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~---~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFF---NWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988764 5554443 344333333333 234455556666666666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 295 VAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYR----IQLEEMRGVEFRWLRKALYSQAFITFIFWSSPI 370 (1343)
Q Consensus 295 ~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~----~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~ 370 (1343)
++++.++..++++..........-+.++|+.++|.|+..+... +.-++.|+..|+.+|-......+.-++.+.+ +
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-i 238 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-I 238 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 8888888888899998889999999999999999999865544 4456789999998887766655555443333 3
Q ss_pred HHHHHHHHHHHHhC-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc-cCCCCC
Q 000702 371 FVAAVTFGTSILLG-AQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIV-LPRGMT 448 (1343)
Q Consensus 371 ~~~~~~f~~~~~~~-~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~-~~~~~~ 448 (1343)
.+.++.++ +.+.+ |++|....+.++.+...+..|++.+...++.-.++..+.+++..|++.|....+.... ......
T Consensus 239 AlvAv~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~ 317 (559)
T COG4988 239 ALVAVYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEP 317 (559)
T ss_pred HHHHHHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCC
Confidence 33333334 44455 6999999999999999999999999999999999999999999999988765433221 111112
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 449 NVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
...+..+|++|.|++ ++++++|+||++++|++++|||+||||||||+++|+|+++|++|+|.+||
T Consensus 318 ~~ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k 395 (559)
T COG4988 318 PIEISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRK 395 (559)
T ss_pred CceeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHh
Confidence 234556699999864 34899999999999999999999999999999999999999999999998
Q ss_pred eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 516 TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
+++||+|+|++|++||||||+|+++ .+++++.++++..++.+.++. |+|.+|.+||+|.+|||||+|||+||||++++
T Consensus 396 ~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 396 QISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred HeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 4899999999999999999999998 678999999999999999999 99999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHH
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVS 674 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 674 (1343)
+++||||||||+||+++++.|.+ .+..+.++||+|+||||++.+..||+|++|++|+++++|+|+++.++++.|.+++.
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~~-~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIILQ-ALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHHH-HHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 99999999999999999877754 56677789999999999999999999999999999999999999999999999887
Q ss_pred HHH
Q 000702 675 AHH 677 (1343)
Q Consensus 675 ~~~ 677 (1343)
.+.
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 653
No 50
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.1e-67 Score=660.61 Aligned_cols=544 Identities=22% Similarity=0.279 Sum_probs=426.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLG-GKETF--PHEGYILAGIFFSAKLVETITTRQWYLGVDI 202 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~-~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 202 (1343)
++.+++.+++.++++.++.++..++..+.|++++.++|... .+... ....+..++++++..++..++.....+...+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (574)
T PRK11160 7 FLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHD 86 (574)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33467888888999999999999999999999999999642 22100 0111111223333444555555555566778
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVAT 281 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~ 281 (1343)
.+.++...++..+|+|.++++...+++.++|++++++++|++.+.+++. .+..+....+.+++++++++...+..+++.
T Consensus 87 ~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 166 (574)
T PRK11160 87 ATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTL 166 (574)
T ss_pred HHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999998764 445555555656555555544433333333
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 282 LIATI-ISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF 360 (1343)
Q Consensus 282 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 360 (1343)
+++++ +.+.+..++.++.++..++.++..++..+.+.|.++|+++||.|+.|+.+.+++++..++..+...+.......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (574)
T PRK11160 167 GGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGL 246 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332 23334566677778888888999999999999999999999999999988888777655443333333222222
Q ss_pred HHHHHH--HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 000702 361 ITFIFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRI-LQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQE 437 (1343)
Q Consensus 361 ~~~~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~-l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~ 437 (1343)
...+.. .....+.++.++.+. .++.+++|.+++++.+... ...|+..++..+..++++.+|.+|+.++++.++..+
T Consensus 247 ~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~ 325 (574)
T PRK11160 247 SQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVT 325 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 221111 111223344566665 4778999998888777544 356888899999999999999999999998764322
Q ss_pred ccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-
Q 000702 438 DATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT- 516 (1343)
Q Consensus 438 ~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~- 516 (1343)
..... ........++++|++|+|++ +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 326 ~~~~~-~~~~~~~~i~~~~v~f~y~~-~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~ 403 (574)
T PRK11160 326 FPTTS-TAAADQVSLTLNNVSFTYPD-QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQP 403 (574)
T ss_pred CCccc-CCCCCCCeEEEEEEEEECCC-CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEE
Confidence 11111 11112346999999999854 3357999999999999999999999999999999999999999999999983
Q ss_pred ------------EEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 517 ------------AAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 517 ------------i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
++||+|+|++|++||+|||.+|.+ .++++..++++.++++++++. |+|++|.+||+|.+|||||||
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrq 482 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQR 482 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHH
Confidence 899999999999999999999976 688899999999999999999 999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|++||||++++|+++|||||||+||+++++.+.+. +....+++|+|+||||++.++.||+|++|++|++++.|+|+|++
T Consensus 483 RialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 561 (574)
T PRK11160 483 RLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELL 561 (574)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999998888664 55566799999999999999999999999999999999999999
Q ss_pred hcCccHHHHHH
Q 000702 664 QAGTDFNALVS 674 (1343)
Q Consensus 664 ~~~~~~~~~~~ 674 (1343)
+.++.|.++++
T Consensus 562 ~~~g~y~~l~~ 572 (574)
T PRK11160 562 AQQGRYYQLKQ 572 (574)
T ss_pred hcCcHHHHHHh
Confidence 99988888764
No 51
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.2e-67 Score=660.34 Aligned_cols=541 Identities=26% Similarity=0.355 Sum_probs=431.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
++.+++ ++ .++...++.++..++....|+++..+++.+... ....+.+...+++..++..++.....+...+.+.
T Consensus 7 l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 81 (567)
T COG1132 7 LLKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQ 81 (567)
T ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455 77 888888999999999999999999999987611 1112222222333333444444445555566778
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHD-IWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~-~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
++...++..+|+|.++++...+++.++|++++++++|++.+...+..... +..+++.++..+++++......+++.++.
T Consensus 82 ~~~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~ 161 (567)
T COG1132 82 KIVADLRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI 161 (567)
T ss_pred HHHHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987655323 33345555555555554433344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000702 285 TIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFIT-F 363 (1343)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~-~ 363 (1343)
.+++..+..++.++.++..++..+..++..+.+.|.++|+++||.|+.|+...++..+..+...+...+......... .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (567)
T COG1132 162 LPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPL 241 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556666667888888999999999999999999999999999987766665544433332222122222221 1
Q ss_pred H-HHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 000702 364 I-FWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIV 442 (1343)
Q Consensus 364 ~-~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~ 442 (1343)
. .........++.++.+.+..+.+++|.+.+++.++..+..|+..+...+..+..+..|.+|+.++++.++...+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 321 (567)
T COG1132 242 MLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC
Confidence 1 112223344566777777888899999999999999999999999999999999999999999999986542222111
Q ss_pred cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------
Q 000702 443 LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------- 515 (1343)
Q Consensus 443 ~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------- 515 (1343)
.......|+++|++|+|++ ++++|+|+||++++||++|||||||||||||+++|+|+++|++|+|.+||
T Consensus 322 --~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~ 397 (567)
T COG1132 322 --LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDIS 397 (567)
T ss_pred --CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcC
Confidence 1112346999999999863 46899999999999999999999999999999999999999999999988
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+++||||+|++|++||+|||.+|++ .++++..++++.++++++++.+|+|++|.+||+|.+||||||||++||
T Consensus 398 ~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiA 477 (567)
T COG1132 398 LDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIA 477 (567)
T ss_pred HHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHH
Confidence 3899999999999999999999988 688999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCcc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTD 668 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 668 (1343)
||++++|+|+|||||||+||+++++.+.+. +....++||+|+|+||++.+.+||+|+||++|+|++.|+|+||++.++.
T Consensus 478 Rall~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~ 556 (567)
T COG1132 478 RALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGL 556 (567)
T ss_pred HHHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCH
Confidence 999999999999999999999998888765 4455588999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 000702 669 FNALVSAH 676 (1343)
Q Consensus 669 ~~~~~~~~ 676 (1343)
|.+++..+
T Consensus 557 y~~l~~~~ 564 (567)
T COG1132 557 YARLYQAQ 564 (567)
T ss_pred HHHHHHHh
Confidence 99988654
No 52
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=5.9e-67 Score=660.97 Aligned_cols=549 Identities=21% Similarity=0.286 Sum_probs=436.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 124 SLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDIL 203 (1343)
Q Consensus 124 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 203 (1343)
+.++.+++.+++.+++..++.++..++.++.|++++.++|.+-...+.. ....+++++++..++..+......+...++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 7 AALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSG-LLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677888888888889999999999999999999999743221111 111122223333333444445555667788
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 204 GMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATL 282 (1343)
Q Consensus 204 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~ 282 (1343)
+.++...++..+|+|+++++...+++.+.|++++++++|++.+.+++. .+..++...+.+++++++++...++.+++.+
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999998999999999999999999988653 3444455555555554444433333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 283 IATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFIT 362 (1343)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~ 362 (1343)
+.+++.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.........
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444555566788888888999999999999999999999999999999999887777765544443332222222111
Q ss_pred HHH--HHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 000702 363 FIF--WSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDAT 440 (1343)
Q Consensus 363 ~~~--~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~ 440 (1343)
.+. ......+.++.+|++.+..+.+|+|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 111 111223345567888888899999999999999999999999999999999999999999999998654322111
Q ss_pred cc-cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----
Q 000702 441 IV-LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---- 515 (1343)
Q Consensus 441 ~~-~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---- 515 (1343)
.. ....+....|+++|++|+|+++.++++|+|+||+++|||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 326 ~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~ 405 (576)
T TIGR02204 326 HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLR 405 (576)
T ss_pred CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHH
Confidence 00 0111112469999999999653346899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 ---------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 ---------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++|+||+|++|++||+|||.+|.+ .++++..++++.+++.++++.+|+|++|.+||+|.+||||||||+
T Consensus 406 ~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl 485 (576)
T TIGR02204 406 QLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRI 485 (576)
T ss_pred hcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHH
Confidence 4899999999999999999999876 578889999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+||||++++|+++|||||||+||+++++.+++. +....+++|+|+||||++.++.||+|++|++|++++.|+++++.+.
T Consensus 486 ~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~ 564 (576)
T TIGR02204 486 AIARAILKDAPILLLDEATSALDAESEQLVQQA-LETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK 564 (576)
T ss_pred HHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc
Confidence 999999999999999999999999998877654 5555679999999999999999999999999999999999999988
Q ss_pred CccHHHHHH
Q 000702 666 GTDFNALVS 674 (1343)
Q Consensus 666 ~~~~~~~~~ 674 (1343)
++.|.+++.
T Consensus 565 ~~~~~~l~~ 573 (576)
T TIGR02204 565 GGLYARLAR 573 (576)
T ss_pred CChHHHHHh
Confidence 887777653
No 53
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1e-66 Score=669.54 Aligned_cols=547 Identities=19% Similarity=0.248 Sum_probs=446.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 123 PSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDI 202 (1343)
Q Consensus 123 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 202 (1343)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+....+ ....+.++++++++.++..++.....+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777888889889999999999999999999999997753221 1122333444455555566666666667788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVAT 281 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~ 281 (1343)
++.++...++..+|+|+++++..++++.++|++++++ +|++.+.+++. .+.......+.+++.+++++...++.+++.
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 284 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 69999988653 333333333333444445555555555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 282 LIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFI 361 (1343)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~ 361 (1343)
++++++++.+..++.++.++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++.+..++..+...+........
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677777788888888888889999999999999999999999999999888888776555444433333332222
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc
Q 000702 362 TFIFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDA 439 (1343)
Q Consensus 362 ~~~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~ 439 (1343)
..+.. .....+.++++|++.+..+.+|+|.++++..+...+..|+..+...+..+++++++++|+.++++.+++.+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 22111 1122334567888888899999999999999999999999999999999999999999999999876543221
Q ss_pred ccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe---
Q 000702 440 TIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--- 516 (1343)
Q Consensus 440 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--- 516 (1343)
. ..+.......|+++|++|+|++ +++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 445 ~-~~~~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~ 522 (694)
T TIGR01846 445 G-LAALPELRGAITFENIRFRYAP-DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLA 522 (694)
T ss_pred C-CCCCCCCCCeEEEEEEEEEcCC-CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehh
Confidence 1 1111112346999999999864 3457999999999999999999999999999999999999999999999983
Q ss_pred ----------EEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 517 ----------AAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 517 ----------i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
++||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|++|.+|++|.+||||||||+
T Consensus 523 ~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri 602 (694)
T TIGR01846 523 IADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRI 602 (694)
T ss_pred hCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHH
Confidence 799999999999999999999875 678889999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+||||++++|+++|||||||+||+++++.+.+. +....+++|+|+||||++.++.||+|++|++|++++.|+|+++++.
T Consensus 603 ~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~ 681 (694)
T TIGR01846 603 AIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL 681 (694)
T ss_pred HHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc
Confidence 999999999999999999999999999888765 4555678999999999999999999999999999999999999998
Q ss_pred CccHHHHHH
Q 000702 666 GTDFNALVS 674 (1343)
Q Consensus 666 ~~~~~~~~~ 674 (1343)
++.|.++++
T Consensus 682 ~~~y~~l~~ 690 (694)
T TIGR01846 682 QGLYARLWQ 690 (694)
T ss_pred CChHHHHHH
Confidence 888888765
No 54
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.5e-67 Score=653.74 Aligned_cols=507 Identities=20% Similarity=0.241 Sum_probs=397.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
++.+++.+++.++...++.++..++..+.|++++.++|.+..... ....+.+++++++..++..++.....+...+.+.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAAL 82 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888888889999999999999999999997643221 1111111111222334444444444555677888
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
++...++..+|+|.++++...+++.++|++++++++|++++.+.+. .+..++...+.+++++++++...+..+++.++.
T Consensus 83 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 162 (529)
T TIGR02868 83 RSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAG 162 (529)
T ss_pred HHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988654 344455555555555555554444444444444
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 285 TIISIVVT-VPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITF 363 (1343)
Q Consensus 285 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~ 363 (1343)
++++.++. .+..+..++..++..+..++..+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 163 LLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333 33344456666777888899999999999999999999999999888887665554444443333333222
Q ss_pred HHHH--HHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 000702 364 IFWS--SPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATI 441 (1343)
Q Consensus 364 ~~~~--~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~ 441 (1343)
+... ....+.+++++.+.+.++.+|+|.+.+++.+...+..|+..++..+..+.+++++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 2211 11223345677788888999999999999999999999999999999999999999999999987654221110
Q ss_pred c--cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----
Q 000702 442 V--LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---- 515 (1343)
Q Consensus 442 ~--~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---- 515 (1343)
. .........|+++|++|+|++ ++++|+|+||+|++||+++||||||||||||+++|+|+++|++|+|.++|
T Consensus 323 ~~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~ 400 (529)
T TIGR02868 323 PAAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVS 400 (529)
T ss_pred CCCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhh
Confidence 0 001112346999999999854 34799999999999999999999999999999999999999999999999
Q ss_pred --------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 --------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 --------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++||||+|++|++||||||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|.+|||||||||+
T Consensus 401 ~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRia 480 (529)
T TIGR02868 401 SLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLA 480 (529)
T ss_pred hHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHH
Confidence 6999999999999999999999975 6889999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCC
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQV 636 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~ 636 (1343)
||||++++|+|+|||||||+||+++++.+.+. +....+++|+|+||||+
T Consensus 481 iARall~~~~iliLDE~TSaLD~~te~~I~~~-l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 481 LARALLADAPILLLDEPTEHLDAGTESELLED-LLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999988766 45566899999999985
No 55
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.2e-66 Score=655.44 Aligned_cols=541 Identities=21% Similarity=0.286 Sum_probs=427.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 127 LAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMH 206 (1343)
Q Consensus 127 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1343)
..+++.+++.+++.+++.++..++.++.|++++.++|.+.... . .+.+++.+++..++..+......+...++..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T PRK13657 11 LQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG---D-IFPLLAAWAGFGLFNIIAGVLVARHADRLAHR 86 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888889999999999999999999999775432 1 11111111122222222233334445667788
Q ss_pred HHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 207 VRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIAT 285 (1343)
Q Consensus 207 ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~ 285 (1343)
++..++..+|+|.++++...+.+.+.|++++++++|++.+.+... .+..+....+..++.+++++...++.+++.++++
T Consensus 87 ~~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~ 166 (588)
T PRK13657 87 RRLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLG 166 (588)
T ss_pred HHHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999976532 3444444444343444444443334444455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHH
Q 000702 286 IISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFR----WLRKALYSQAFI 361 (1343)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~----~~~~~~~~~~~~ 361 (1343)
++...+...+.++.++..++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++..+ ..+.......+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5556677788888888899999999999999999999999999999998877666554433322 222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 000702 362 TFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATI 441 (1343)
Q Consensus 362 ~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~ 441 (1343)
.+. .....+.+++++++.+..+.+|+|.+++++.++..+..|+..+...+..+..+..+++|+.++++.++..+....
T Consensus 247 ~~~--~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~ 324 (588)
T PRK13657 247 RAA--STITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG 324 (588)
T ss_pred HHH--HHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC
Confidence 211 122334556778888889999999999999999999999999999999999999999999999876543221111
Q ss_pred ccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------
Q 000702 442 VLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------ 515 (1343)
Q Consensus 442 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------ 515 (1343)
..+.......|+++|++|+|++ ++++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 325 ~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~ 402 (588)
T PRK13657 325 AIDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTV 402 (588)
T ss_pred CCCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhC
Confidence 1111112236999999999953 35799999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 -------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 -------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++||||+|++|++||||||+++++ .++++..++++.+++++++..+|+|++|.+|++|.+||||||||++|
T Consensus 403 ~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRial 482 (588)
T PRK13657 403 TRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAI 482 (588)
T ss_pred CHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHH
Confidence 4899999999999999999999965 67888999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGT 667 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 667 (1343)
|||++++|+|+|||||||+||+++++.+++.+ ....+++|+|+||||++.++.||+|++|++|++++.|+|+++++.++
T Consensus 483 ARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~ 561 (588)
T PRK13657 483 ARALLKDPPILILDEATSALDVETEAKVKAAL-DELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGG 561 (588)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCC
Confidence 99999999999999999999999999887654 45557899999999999999999999999999999999999998888
Q ss_pred cHHHHHHHH
Q 000702 668 DFNALVSAH 676 (1343)
Q Consensus 668 ~~~~~~~~~ 676 (1343)
.|.++++..
T Consensus 562 ~y~~l~~~~ 570 (588)
T PRK13657 562 RFAALLRAQ 570 (588)
T ss_pred hHHHHHHHh
Confidence 888877643
No 56
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-69 Score=678.95 Aligned_cols=484 Identities=24% Similarity=0.356 Sum_probs=357.1
Q ss_pred ceEEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 450 VAIQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
..++++|++++|.... ..++|+||||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3699999999985322 34799999999999999999999999999999999999999999998754
Q ss_pred --------------eEEEEcccc--ccc-CccHHHHhccCCC----CCHH----HHHHHHHHhhhhhhHhhccCCCcccc
Q 000702 516 --------------TAAYVSQSA--WIQ-SGNIEENILFGSP----MDKA----KYKKVIHACSLKKDLELFSHGDQTII 570 (1343)
Q Consensus 516 --------------~i~~v~Q~~--~l~-~~ti~~Ni~~g~~----~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~i 570 (1343)
.++||+|+| -++ ..||+|||.++.. .+.. +..++++..++.+ .....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------~~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPE--------AQTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCC--------hhhHH
Confidence 389999998 344 4699999987521 2221 2223333333311 01234
Q ss_pred CCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCcccc-CCEEEE
Q 000702 571 GDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFLPA-ADFILV 647 (1343)
Q Consensus 571 g~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l~~-~d~i~~ 647 (1343)
.....+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. ++.+. + |+|+|+|||+++.+.. ||+|++
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 567788999999999999999999999999999999999998888764 44432 3 8999999999998764 999999
Q ss_pred EeCCeEEEecChHHHHhcCcc-HHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccC
Q 000702 648 LKEGRIIQAGKYDDLLQAGTD-FNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDG 726 (1343)
Q Consensus 648 l~~G~i~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (1343)
|++|++++.|+++++...... |..-
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~~------------------------------------------------------ 267 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTRA------------------------------------------------------ 267 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhhh------------------------------------------------------
Confidence 999999999998876431100 0000
Q ss_pred CchhHHHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCC
Q 000702 727 SSASEQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQT 806 (1343)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 806 (1343)
++.+. .. +..+..
T Consensus 268 -----------------------------------------l~~~~----------------------~~--~~~~~~-- 280 (623)
T PRK10261 268 -----------------------------------------LLAAV----------------------PQ--LGAMKG-- 280 (623)
T ss_pred -----------------------------------------hhhcc----------------------Cc--cccccc--
Confidence 00000 00 000000
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhh
Q 000702 807 EGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVV 886 (1343)
Q Consensus 807 ~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~i 886 (1343)
.. .|-.
T Consensus 281 -~~----------------------------------------------------~~~~--------------------- 286 (623)
T PRK10261 281 -LD----------------------------------------------------YPRR--------------------- 286 (623)
T ss_pred -cc----------------------------------------------------CCcc---------------------
Confidence 00 0000
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccch
Q 000702 887 DLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAS 966 (1343)
Q Consensus 887 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~ 966 (1343)
.+.
T Consensus 287 ---~~~-------------------------------------------------------------------------- 289 (623)
T PRK10261 287 ---FPL-------------------------------------------------------------------------- 289 (623)
T ss_pred ---ccc--------------------------------------------------------------------------
Confidence 000
Q ss_pred heeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 000702 967 TIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNA 1046 (1343)
Q Consensus 967 tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~ 1046 (1343)
..
T Consensus 290 --------------------------------------------------------------~~---------------- 291 (623)
T PRK10261 290 --------------------------------------------------------------IS---------------- 291 (623)
T ss_pred --------------------------------------------------------------cc----------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCC-CCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCC---------CCccccc
Q 000702 1047 RLSRWILSFCKLENKIISIERIYQYSQIPG-EAPPVIEDSRPPSSWPENGTIELIDLKVRYGEN---------LPLVLHG 1116 (1343)
Q Consensus 1047 ~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~-e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~ 1116 (1343)
...+. +.+...... .+ +...-++++|++++|+.. ...+|+|
T Consensus 292 -------------------------~~~~~~~~~~~~~~~-~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~ 342 (623)
T PRK10261 292 -------------------------LEHPAKQEPPIEQDT-VV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEK 342 (623)
T ss_pred -------------------------cccccccCccccccc-cc---CCCceEEEeeeEEEEcCCCccccccCCceEEEee
Confidence 00000 000000000 00 012259999999999621 1359999
Q ss_pred ceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHhhcceeecCCcc--ccC-Cchhh
Q 000702 1117 ITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLRSRLGIIPQDPN--LFE-GTIRC 1190 (1343)
Q Consensus 1117 is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR~~i~iVpQdp~--lF~-gTIr~ 1190 (1343)
|||+|++||++||||+||||||||+++|.|+++|++|+|.++|.++...+.. .+|++|+||||+|. ++. -|+++
T Consensus 343 vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~ 422 (623)
T PRK10261 343 VSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGD 422 (623)
T ss_pred eEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHH
Confidence 9999999999999999999999999999999999999999999999877643 35778999999983 665 49999
Q ss_pred hcCC-C---CCCC----HHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCC
Q 000702 1191 NLDP-L---EEHS----DREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEAT 1261 (1343)
Q Consensus 1191 NLdp-~---~~~s----d~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaT 1261 (1343)
|+.. . .... ++++.++|+.+++. +...+.| ..||||||||++|||||+.+|++|||||||
T Consensus 423 ~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPt 491 (623)
T PRK10261 423 SIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAV 491 (623)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9852 1 1111 24577888999885 3433322 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHH-HHHHHH
Q 000702 1262 ASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMF-LKLVTE 1332 (1343)
Q Consensus 1262 s~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f-~~l~~~ 1332 (1343)
++||..+.+.|.+.|++..+ +.|||+|||+++.+.. ||||+||++|+|+|.|+++++..++...| +.++.+
T Consensus 492 s~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~~ 566 (623)
T PRK10261 492 SALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMAA 566 (623)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHhh
Confidence 99999999999999987643 6899999999999876 99999999999999999999987655545 445543
No 57
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.5e-66 Score=648.43 Aligned_cols=529 Identities=22% Similarity=0.288 Sum_probs=419.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000702 144 AGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAMVYRKGLKLS 223 (1343)
Q Consensus 144 ~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~K~l~l~ 223 (1343)
.++..++..+.|++++.++|.+..........+.++++++++.++..++.....+...+.+.++...++..+|+|+++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45566777889999999999775432111122333334444445555555554555667889999999999999999999
Q ss_pred ccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 224 SLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVG-IASVATLIATIISIVVTVPVAKVQEE 301 (1343)
Q Consensus 224 ~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g-~~~l~~~~~~~~~~~~~~~~~~~~~~ 301 (1343)
...+.+.++|++++++++|++.+..... .+..++..++.+++++++++..++ ..+++.++++++.+.+...+.++.++
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999986543 455555555555545444432222 34444455555556666777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Q 000702 302 YQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFW--SSPIFVAAVTFGT 379 (1343)
Q Consensus 302 ~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~f~~ 379 (1343)
..++.++..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+..........+.. .....+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999988777766543332222222222221111111 1112233456778
Q ss_pred HHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcceEEEEeeEE
Q 000702 380 SILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNVAIQIENAEF 459 (1343)
Q Consensus 380 ~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~~~~~~f 459 (1343)
+.+.++.+|+|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..+..... .+.....|+++|++|
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~--~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEP--VPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCC--CCCCCCcEEEEEEEE
Confidence 888899999999999999999999999999999999999999999999999876432211111 111223699999999
Q ss_pred EecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEEEEcccccc
Q 000702 460 CWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAAYVSQSAWI 526 (1343)
Q Consensus 460 ~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~~v~Q~~~l 526 (1343)
+|+. .++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++||+|+|++
T Consensus 322 ~y~~-~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQ-TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCC-CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 9864 346899999999999999999999999999999999999999999999987 37999999999
Q ss_pred cCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 000702 527 QSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFS 605 (1343)
Q Consensus 527 ~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s 605 (1343)
|++|++|||.+|.+ .++++++++++.+++++++..+|+|++|.+|++|.+||||||||++||||++++|+++|||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999964 68889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHHH
Q 000702 606 AVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVSAH 676 (1343)
Q Consensus 606 ~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 676 (1343)
+||+++++++.+. +....+++|+|+||||++.++.||+|++|++|+++++|+++++++..+.|.+++..+
T Consensus 481 ~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 481 AVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred cCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999988765 455567999999999999999999999999999999999999999888888877654
No 58
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3.4e-65 Score=641.31 Aligned_cols=543 Identities=18% Similarity=0.250 Sum_probs=428.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
++.+++.+++.++...++.++..++..+.|++++.++|.+..... . ..+++..++..++..+......+...++..
T Consensus 10 l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (585)
T TIGR01192 10 ALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD--V--LPTLALWAGFGVFNTIAYVLVAREADRLAH 85 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345678888899999999999999999999999999997654321 1 111111112223333333333445567788
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
+++..++..+|+|.++++.+.+++.++|++++++++|++.+.+++. .+..+...++.+++++++++...+..+++.+++
T Consensus 86 ~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 165 (585)
T TIGR01192 86 GRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVL 165 (585)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999999999987653 344445555555555444444434444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 285 TIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFI 364 (1343)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~ 364 (1343)
+++.+.+...+.++.++..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+..........+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (585)
T TIGR01192 166 GILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGL 245 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666667777888888888888889999999999999999999999998887777665443222222211111111111
Q ss_pred H--HHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc
Q 000702 365 F--WSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIV 442 (1343)
Q Consensus 365 ~--~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~ 442 (1343)
. ......+.++.+|.+.+..+.+|+|.+++++.++..+..|+..+...+..+.+++.+.+|+.++++.++..++....
T Consensus 246 ~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 325 (585)
T TIGR01192 246 NRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADA 325 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccC
Confidence 1 11122334566788888899999999999999999999999999999999999999999999999865432211110
Q ss_pred cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------
Q 000702 443 LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------- 515 (1343)
Q Consensus 443 ~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------- 515 (1343)
.+.......++++|++|+|++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~ 403 (585)
T TIGR01192 326 PELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVT 403 (585)
T ss_pred CCCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCC
Confidence 011112236999999999853 34789999999999999999999999999999999999999999999987
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
.++||+|+|++|++|++|||.++.+ .++++.+++++.+++++.+..+|+|++|.+|++|.+||||||||++||
T Consensus 404 ~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lA 483 (585)
T TIGR01192 404 RESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIA 483 (585)
T ss_pred HHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHH
Confidence 3799999999999999999999965 567788888999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCcc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTD 668 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 668 (1343)
||++++|+++|||||||+||+++++.+.+. +....+++|+|+||||++.++.||+|++|++|++++.|++++++++++.
T Consensus 484 Rall~~p~ililDEpts~LD~~~~~~i~~~-l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 562 (585)
T TIGR01192 484 RAILKNAPILVLDEATSALDVETEARVKNA-IDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGR 562 (585)
T ss_pred HHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCCh
Confidence 999999999999999999999998888654 5555679999999999999999999999999999999999999998888
Q ss_pred HHHHHHH
Q 000702 669 FNALVSA 675 (1343)
Q Consensus 669 ~~~~~~~ 675 (1343)
|.+++..
T Consensus 563 y~~l~~~ 569 (585)
T TIGR01192 563 FYKLLRR 569 (585)
T ss_pred HHHHHHh
Confidence 8887753
No 59
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.2e-66 Score=648.84 Aligned_cols=514 Identities=18% Similarity=0.142 Sum_probs=401.0
Q ss_pred HHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000702 784 AQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAP 863 (1343)
Q Consensus 784 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p 863 (1343)
+.++..+..+..+++++.+.+... .. .. ..+..++++.++..++.++..++....+.+...+++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~--~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEEN--FL--GQ-GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCC--cc--cc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 344445555556666665543210 00 00 12223444555566777888888899999999999999999999999
Q ss_pred cccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 864 MSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSREL 943 (1343)
Q Consensus 864 ~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l 943 (1343)
+.||++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.+.++++.++++.+++..++.+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875 477778888888888889999999988876665555555555554555555
Q ss_pred HHHHHHhhchHHHHHHHhhccchheeecCcHH--HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 944 VRIVSIQKSPIIHLFGESIAGASTIRGFGQEK--RFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLL 1021 (1343)
Q Consensus 944 ~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1021 (1343)
.+......+.+.+++.|.+.|+++||+|+.++ ...+++.+..+...+.................++..+...+ .+.
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 257 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGC--ALF 257 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 55666677889999999999999999999854 44555555555554443322222222212122221111111 111
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCCCC--CC-CCC--CCCCCCCce
Q 000702 1022 VSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVI--ED-SRP--PSSWPENGT 1096 (1343)
Q Consensus 1022 ~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~--~~-~~~--~~~wp~~g~ 1096 (1343)
+....+.++.|.+..++.|...+..++..+...+.+++....+.+|+.++.+.+.+++... .+ ... .+.....+.
T Consensus 258 ~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (555)
T TIGR01194 258 AAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDS 337 (555)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCce
Confidence 1112367899999999999999999999999999999999999999999975322211110 00 000 011123468
Q ss_pred EEEEEEEEEEcCC---CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1097 IELIDLKVRYGEN---LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~ 417 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDL 417 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhh
Confidence 9999999999753 2369999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1174 LGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1174 i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
+++|||||++|++|+++|+. ++.++++++++++.+++++++.++|+||||. .+||||||||++||||++++|+
T Consensus 418 i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 418 FSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred CcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999974 3578999999999999999999999999995 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHH-h-cCCcEEEEeccCcccccccCEEEEEeCCEEeee
Q 000702 1254 ILVLDEATASVDTATDNLIQKIIRT-E-FKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~l~~-~-~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~ 1312 (1343)
|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999887643 2 468999999999999999999999999999975
No 60
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.8e-68 Score=663.37 Aligned_cols=448 Identities=24% Similarity=0.398 Sum_probs=345.2
Q ss_pred eEEEEeeEEEecCC-CCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000702 451 AIQIENAEFCWYPS-SSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG--------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~-~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g--------- 515 (1343)
.++++|++++|+.+ ..+++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999998531 135799999999999999999999999999999999999986 799998865
Q ss_pred --------eEEEEccccc--cc-CccHHHHhccCC----CCCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCC
Q 000702 516 --------TAAYVSQSAW--IQ-SGNIEENILFGS----PMDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGIN 576 (1343)
Q Consensus 516 --------~i~~v~Q~~~--l~-~~ti~~Ni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~ 576 (1343)
.++|++|+|. ++ ..|+++|+.++. ..+. ++.+++++.+++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 3799999985 33 468999986421 1222 2333444444442210 112456778
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000702 577 LSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRI 653 (1343)
Q Consensus 577 LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i 653 (1343)
|||||||||+|||||+.+|+++||||||++||+.+.+++.+. +..+ . .|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999998887654 4443 2 38999999999998764 999999999999
Q ss_pred EEecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHH
Q 000702 654 IQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQK 733 (1343)
Q Consensus 654 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1343)
++.|+.+++..... . + ..
T Consensus 236 ~~~g~~~~~~~~~~--------------------------------------~---------------~--------~~- 253 (529)
T PRK15134 236 VEQNRAATLFSAPT--------------------------------------H---------------P--------YT- 253 (529)
T ss_pred EEeCCHHHHhhCCC--------------------------------------C---------------H--------HH-
Confidence 99888766532100 0 0 00
Q ss_pred HHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCC
Q 000702 734 AIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKV 813 (1343)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 813 (1343)
. .++..
T Consensus 254 ---~-----------------------------~~~~~------------------------------------------ 259 (529)
T PRK15134 254 ---Q-----------------------------KLLNS------------------------------------------ 259 (529)
T ss_pred ---H-----------------------------HHHHh------------------------------------------
Confidence 0 00000
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhh
Q 000702 814 NPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFR 893 (1343)
Q Consensus 814 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~ 893 (1343)
+
T Consensus 260 -------------------------------------------------~------------------------------ 260 (529)
T PRK15134 260 -------------------------------------------------E------------------------------ 260 (529)
T ss_pred -------------------------------------------------C------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCc
Q 000702 894 LGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQ 973 (1343)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~ 973 (1343)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 974 EKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWIL 1053 (1343)
Q Consensus 974 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~ 1053 (1343)
.
T Consensus 261 ----------------------------------------------------~--------------------------- 261 (529)
T PRK15134 261 ----------------------------------------------------P--------------------------- 261 (529)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred HHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcC---------CCCcccccceeEecCC
Q 000702 1054 SFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGE---------NLPLVLHGITCAFPGG 1124 (1343)
Q Consensus 1054 ~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~---------~~~~vL~~is~~I~~G 1124 (1343)
+ .++... ++ +....|+++|++++|+. +..++|+|+||+|++|
T Consensus 262 -------------~------~~~~~~-------~~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~G 312 (529)
T PRK15134 262 -------------S------GDPVPL-------PE---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPG 312 (529)
T ss_pred -------------c------cccccc-------CC---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCC
Confidence 0 000000 00 01114899999999952 1246999999999999
Q ss_pred CEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---HhhcceeecCCc--cccC-CchhhhcCCC---
Q 000702 1125 KKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LRSRLGIIPQDP--NLFE-GTIRCNLDPL--- 1195 (1343)
Q Consensus 1125 ekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR~~i~iVpQdp--~lF~-gTIr~NLdp~--- 1195 (1343)
|++||+|+||||||||+++|.|++ |++|+|.+||.++...+... +|++++||||+| .+|. .|+++|+...
T Consensus 313 e~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~ 391 (529)
T PRK15134 313 ETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRV 391 (529)
T ss_pred CEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHh
Confidence 999999999999999999999998 48999999999998776543 477899999998 3665 4999999631
Q ss_pred C--CCC----HHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Q 000702 1196 E--EHS----DREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTAT 1268 (1343)
Q Consensus 1196 ~--~~s----d~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~t 1268 (1343)
. ..+ ++.+.++++..++. +...+ ++ .+||||||||++|||||+.+|+||||||||++||+.+
T Consensus 392 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~----~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~ 460 (529)
T PRK15134 392 HQPTLSAAQREQQVIAVMEEVGLDPETRHR-------YP----AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTV 460 (529)
T ss_pred ccccCChHHHHHHHHHHHHHcCCCHHHHhc-------CC----ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHH
Confidence 1 011 24567788888885 23322 22 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1269 DNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1269 e~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++++++
T Consensus 461 ~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 461 QAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 9999999997643 7899999999999875 9999999999999999999998654
No 61
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.5e-65 Score=638.25 Aligned_cols=522 Identities=20% Similarity=0.244 Sum_probs=416.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 131 KSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSA 210 (1343)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 210 (1343)
|.+++.++...++.++..++..+.|+++++++|.+....+ ....+.++++++++.++..++.....+...+.+.++...
T Consensus 2 ~~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 2 SKNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888999999999999999999996642221 112233444455555666666666667778899999999
Q ss_pred HHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 211 LTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWY--LHDIWMLPLQIILALAILYKNVGIASVATLIATIIS 288 (1343)
Q Consensus 211 L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~--~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~ 288 (1343)
++..+|+|+++++.. ..+...+.+++|++++.+++.. +..+...++.++.+++ ++...++.+++.++.++++
T Consensus 81 lr~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 81 LNQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLV-CFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH-HHHHhhHHHHHHHHHHHHH
Confidence 999999999999873 2356788899999999886542 3344455554444333 3333333334444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000702 289 IVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFW-- 366 (1343)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~-- 366 (1343)
+.+..+..++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........+..
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666777778888889999999999999999999999999999999888877666554443333332222222111
Q ss_pred HHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCC
Q 000702 367 SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRG 446 (1343)
Q Consensus 367 ~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~ 446 (1343)
.....+.++++|++.+.++.+|+|.+++++.++..+..|+..+...+..+.+++++.+|+.++++.++..++.. .. .
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~--~ 311 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL--P 311 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC--C
Confidence 11123345668888888999999999999999999999999999999999999999999999997765432211 11 1
Q ss_pred CCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------
Q 000702 447 MTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG----------- 515 (1343)
Q Consensus 447 ~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g----------- 515 (1343)
..+..++++|++|+|++ +++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 312 ~~~~~i~~~~v~~~y~~-~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPG-GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCC-CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 12246999999999853 346899999999999999999999999999999999999999999999987
Q ss_pred --eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 516 --TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 516 --~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
.++||||+|++|++|++|||.++.+ .+++++.++++.+++++.++.+|+|++|.+|++|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 3899999999999999999997655 7888999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
++|+++|||||||+||+++++.+.+. +... .+++|+|++|||++.+..||+|++|++|++++.|+++++++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999998888764 4444 36899999999999888899999999999999999999864
No 62
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-68 Score=656.79 Aligned_cols=443 Identities=23% Similarity=0.337 Sum_probs=340.0
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC--CCcEEEECC-------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK--ISGEVRLCG------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~--~~G~i~~~g------------- 515 (1343)
.++++|++++|. ++++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999984 35799999999999999999999999999999999999996 899999987
Q ss_pred -eEEEEcccccccC-ccHHHHhccCCCC------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 -TAAYVSQSAWIQS-GNIEENILFGSPM------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~-~ti~~Ni~~g~~~------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++|++|++.++. .|++||+.++... +.+...+.++ +-++.+ |..........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQ-----KLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHH-----HHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 2899999987764 6999999987431 2211111111 112222 22223445677899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
|||++.+|+++||||||++||+.....+.+.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 999999999999999999999999888776433323358999999999998865 999999999999887653321000
Q ss_pred ccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhh
Q 000702 667 TDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRK 746 (1343)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1343)
.
T Consensus 234 -----------------------------------------------------------------------~-------- 234 (506)
T PRK13549 234 -----------------------------------------------------------------------D-------- 234 (506)
T ss_pred -----------------------------------------------------------------------H--------
Confidence 0
Q ss_pred hhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHH
Q 000702 747 KQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALA 826 (1343)
Q Consensus 747 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~ 826 (1343)
..+ . +. + .
T Consensus 235 --~~~---~------------~~---~-----------------------------------~----------------- 242 (506)
T PRK13549 235 --IIT---M------------MV---G-----------------------------------R----------------- 242 (506)
T ss_pred --HHH---H------------hh---C-----------------------------------c-----------------
Confidence 000 0 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHH
Q 000702 827 FGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVG 906 (1343)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~ 906 (1343)
+
T Consensus 243 ------------------------------------~------------------------------------------- 243 (506)
T PRK13549 243 ------------------------------------E------------------------------------------- 243 (506)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHH
Q 000702 907 IIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLD 986 (1343)
Q Consensus 907 ~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d 986 (1343)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000702 987 CFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIE 1066 (1343)
Q Consensus 987 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~e 1066 (1343)
. .
T Consensus 244 ------------------------------------------~------------------------------------~ 245 (506)
T PRK13549 244 ------------------------------------------L------------------------------------T 245 (506)
T ss_pred ------------------------------------------c------------------------------------c
Confidence 0 0
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcC-CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000702 1067 RIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGE-NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALF 1145 (1343)
Q Consensus 1067 Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~-~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~ 1145 (1343)
+ . .+... ++ +....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.
T Consensus 246 ~---~--~~~~~--------~~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~ 309 (506)
T PRK13549 246 A---L--YPREP--------HT---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLF 309 (506)
T ss_pred c---c--ccccc--------cC---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHh
Confidence 0 0 00000 00 11125999999999953 2245999999999999999999999999999999999
Q ss_pred cccC-CCcceEEEcCeecCCCCh-HHHhhcceeecCCc---cccC-CchhhhcCCC--CC------CC----HHHHHHHH
Q 000702 1146 RLIE-PACGRIIIDNIDISTIGL-HDLRSRLGIIPQDP---NLFE-GTIRCNLDPL--EE------HS----DREIWEAL 1207 (1343)
Q Consensus 1146 rl~~-~~~G~I~IdG~di~~i~l-~~LR~~i~iVpQdp---~lF~-gTIr~NLdp~--~~------~s----d~ei~~aL 1207 (1343)
|+++ |++|+|.++|.|+...+. +..|++++|+||+| .+|. .|+.+|+... .. .+ .+++.+++
T Consensus 310 Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 389 (506)
T PRK13549 310 GAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESI 389 (506)
T ss_pred CCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHH
Confidence 9998 599999999999875543 34677899999997 3564 5999999631 11 11 13466777
Q ss_pred HHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEE
Q 000702 1208 DKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTV 1285 (1343)
Q Consensus 1208 ~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~Tv 1285 (1343)
+++++. +. .|.++ ..||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++||
T Consensus 390 ~~~~l~~~~-------~~~~~----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 458 (506)
T PRK13549 390 QRLKVKTAS-------PELAI----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAI 458 (506)
T ss_pred HhcCccCCC-------ccccc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEE
Confidence 777763 22 23333 4799999999999999999999999999999999999999999998753 47899
Q ss_pred EEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1286 CTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1286 I~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|+|||+++.+.. |||+++|++|+++..|+++++.
T Consensus 459 i~~sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 459 IVISSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred EEECCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 999999999876 9999999999999999998874
No 63
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-67 Score=655.88 Aligned_cols=437 Identities=20% Similarity=0.313 Sum_probs=336.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999884 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcccccccC-ccHHHHhccCCC-----C-----CHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSP-----M-----DKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~-----~-----~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
++|++|++.++. .|++||+.++.. + +.. +..++++.+++ .........+|||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~ 150 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGL-----------KVDLDEKVANLSISH 150 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCC-----------CCCcccchhhCCHHH
Confidence 899999987665 599999987632 0 111 11222222222 222345667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 660 (1343)
||||+|||||+.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (510)
T PRK09700 151 KQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVS 230 (510)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchh
Confidence 999999999999999999999999999999888876433333358999999999998864 9999999999999877765
Q ss_pred HHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHH
Q 000702 661 DLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKK 740 (1343)
Q Consensus 661 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (1343)
++... +.. +
T Consensus 231 ~~~~~-----~~~---------------------------------------------------------------~--- 239 (510)
T PRK09700 231 DVSND-----DIV---------------------------------------------------------------R--- 239 (510)
T ss_pred hCCHH-----HHH---------------------------------------------------------------H---
Confidence 43110 000 0
Q ss_pred HhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHH
Q 000702 741 AKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLV 820 (1343)
Q Consensus 741 ~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 820 (1343)
...+. ..
T Consensus 240 --------------~~~~~------------------------------------------~~----------------- 246 (510)
T PRK09700 240 --------------LMVGR------------------------------------------EL----------------- 246 (510)
T ss_pred --------------HhcCC------------------------------------------Cc-----------------
Confidence 00000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHH
Q 000702 821 VYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFAST 900 (1343)
Q Consensus 821 ~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~ 900 (1343)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHH
Q 000702 901 TIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKR 980 (1343)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~ 980 (1343)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 981 NLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLEN 1060 (1343)
Q Consensus 981 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~ 1060 (1343)
.
T Consensus 247 ---------------------------------------------~---------------------------------- 247 (510)
T PRK09700 247 ---------------------------------------------Q---------------------------------- 247 (510)
T ss_pred ---------------------------------------------c----------------------------------
Confidence 0
Q ss_pred HhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHH
Q 000702 1061 KIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTL 1140 (1343)
Q Consensus 1061 ~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTL 1140 (1343)
.+ +....+... ++ +....|+++|+++.|. .+|+|+||+|++||++||+|+||||||||
T Consensus 248 -----~~---~~~~~~~~~-------~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTL 305 (510)
T PRK09700 248 -----NR---FNAMKENVS-------NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTEL 305 (510)
T ss_pred -----cc---ccccccccc-------cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHH
Confidence 00 000000000 00 0112599999999763 28999999999999999999999999999
Q ss_pred HHHHhcccCCCcceEEEcCeecCCCCh-HHHhhcceeecCCc---cccCC-chhhhcCCCCC------------CC----
Q 000702 1141 IQALFRLIEPACGRIIIDNIDISTIGL-HDLRSRLGIIPQDP---NLFEG-TIRCNLDPLEE------------HS---- 1199 (1343)
Q Consensus 1141 l~~L~rl~~~~~G~I~IdG~di~~i~l-~~LR~~i~iVpQdp---~lF~g-TIr~NLdp~~~------------~s---- 1199 (1343)
+++|.|+++|++|+|.++|.++...+. ..+|++++|+||++ .+|.+ |+++|+..... ..
T Consensus 306 lk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~ 385 (510)
T PRK09700 306 MNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE 385 (510)
T ss_pred HHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH
Confidence 999999999999999999999876543 45678899999984 57765 99999864211 01
Q ss_pred HHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000702 1200 DREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRT 1278 (1343)
Q Consensus 1200 d~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~ 1278 (1343)
.+++.++++..++. +. .+.++ ..||||||||++|||||+++|+||||||||++||..+.+.+.+.|++
T Consensus 386 ~~~~~~~l~~~~l~~~~-------~~~~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~ 454 (510)
T PRK09700 386 QRTAENQRELLALKCHS-------VNQNI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQ 454 (510)
T ss_pred HHHHHHHHHhcCCCCCC-------ccCcc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHH
Confidence 12356777777763 22 33444 46999999999999999999999999999999999999999999987
Q ss_pred hc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1279 EF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1279 ~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
.. ++.|||+|||+++.+.. ||||++|++|++++.+++.+
T Consensus 455 l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 455 LADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEecCcc
Confidence 53 47899999999998765 99999999999999987733
No 64
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.1e-67 Score=654.68 Aligned_cols=219 Identities=25% Similarity=0.422 Sum_probs=179.9
Q ss_pred eEEEEEEEEEEcC---CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEc-Ce---ecCCCC--
Q 000702 1096 TIELIDLKVRYGE---NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIID-NI---DISTIG-- 1166 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~---~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~Id-G~---di~~i~-- 1166 (1343)
.|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 5999999999953 23469999999999999999999999999999999999999999999996 64 344333
Q ss_pred -hHHHhhcceeecCCccccCC-chhhhcCC-CC-CC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1167 -LHDLRSRLGIIPQDPNLFEG-TIRCNLDP-LE-EH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1167 -l~~LR~~i~iVpQdp~lF~g-TIr~NLdp-~~-~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
...+|++++|+||++.+|.. |+++|+.. .. .. .++++.++++.+++.+.- .++-++.++ ..|||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq 432 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK--AEEILDKYP----DELSEGE 432 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCCh----hhCCHHH
Confidence 23467789999999988875 99999952 11 11 123566788888875310 000123333 4799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecCh
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p 1315 (1343)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+|
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~ 512 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDP 512 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 6899999999999876 999999999999999999
Q ss_pred hHHhh
Q 000702 1316 GRLLE 1320 (1343)
Q Consensus 1316 ~eLl~ 1320 (1343)
+++.+
T Consensus 513 ~~~~~ 517 (520)
T TIGR03269 513 EEIVE 517 (520)
T ss_pred HHHHh
Confidence 98864
No 65
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.5e-64 Score=631.91 Aligned_cols=511 Identities=22% Similarity=0.260 Sum_probs=402.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 133 FWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLG-GKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSAL 211 (1343)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 211 (1343)
||+.++..+++.++..++..+.|+++++++|.+. .... ....+.+++++++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888889999999999999999999773 3221 1122233334444555566666666677788999999999
Q ss_pred HHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 212 TAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATLIATIISIV 290 (1343)
Q Consensus 212 ~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~~~~~~ 290 (1343)
+..+|+|.++++...+++.++|++++++++|++.+++++. .+..++...+.+++++++++...++.+++.++.+++...
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988654 455555555555555554444333333444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-
Q 000702 291 VTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAFITFIFWS-S- 368 (1343)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~-~- 368 (1343)
+...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........+... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777878888888999999999999999999999999999888877665443332222222211111111111 1
Q ss_pred HHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCC
Q 000702 369 PIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMT 448 (1343)
Q Consensus 369 ~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~ 448 (1343)
...+.++.++.+.+..+.+|+|.+++++.+...+..|+..+...+..+.+++++++|+.++++.++...+.. ..+ ...
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~-~~~-~~~ 317 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA-PVT-AAP 317 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc-CCC-CCC
Confidence 111122234555556888999999999999999999999999999999999999999999997543222111 111 111
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe------------
Q 000702 449 NVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------ 516 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------ 516 (1343)
...|+++|++|+|++ .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 318 ~~~i~~~~v~f~y~~-~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPG-RRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCC-CCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 236999999999864 3458999999999999999999999999999999999999999999999983
Q ss_pred -EEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 517 -AAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 517 -i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++||+|+|++|++||+|||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 899999999999999999999865 678899999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEE
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVL 648 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l 648 (1343)
|+++|||||||+||+++++.+++. +....+++|+|+||||++.+..||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEA-LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHH-HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999998765 45556799999999999999999999985
No 66
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.1e-67 Score=647.75 Aligned_cols=436 Identities=20% Similarity=0.327 Sum_probs=335.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 489999999884 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEccccccc-CccHHHHhccCCCC-------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSPM-------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~~-------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
++|++|++.++ ..|++||+.++... +....++.++ +-++.+ |..........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEAD-----KLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHH-----HHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 79999998765 46999999987431 2211111111 112222 222223456678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAGT 667 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 667 (1343)
|||..+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999888765433322358899999999998865 999999999999876653221000
Q ss_pred cHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhh
Q 000702 668 DFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKK 747 (1343)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1343)
...
T Consensus 232 ------------------------------------------------------------------~~~----------- 234 (501)
T PRK10762 232 ------------------------------------------------------------------SLI----------- 234 (501)
T ss_pred ------------------------------------------------------------------HHH-----------
Confidence 000
Q ss_pred hhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHH
Q 000702 748 QLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAF 827 (1343)
Q Consensus 748 ~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~ 827 (1343)
+ . + +..
T Consensus 235 -----~-~------------~---------------------------------~~~----------------------- 240 (501)
T PRK10762 235 -----E-M------------M---------------------------------VGR----------------------- 240 (501)
T ss_pred -----H-H------------h---------------------------------cCC-----------------------
Confidence 0 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHH
Q 000702 828 GSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGI 907 (1343)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~ 907 (1343)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHh
Q 000702 908 IGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDC 987 (1343)
Q Consensus 908 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~ 987 (1343)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000702 988 FARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIER 1067 (1343)
Q Consensus 988 ~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eR 1067 (1343)
+
T Consensus 241 -------------------------------------------------------------------------------~ 241 (501)
T PRK10762 241 -------------------------------------------------------------------------------K 241 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcc
Q 000702 1068 IYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRL 1147 (1343)
Q Consensus 1068 i~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl 1147 (1343)
.. ..++..+ .+ |..-.|+++|+++ .+|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 242 ~~---~~~~~~~-------~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~ 301 (501)
T PRK10762 242 LE---DQYPRLD-------KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGA 301 (501)
T ss_pred cc---ccccccc-------cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCC
Confidence 00 0000000 00 1112589999984 379999999999999999999999999999999999
Q ss_pred cCCCcceEEEcCeecCCCChH-HHhhcceeecCCc---cccC-CchhhhcCCCC-----C----CC----HHHHHHHHHH
Q 000702 1148 IEPACGRIIIDNIDISTIGLH-DLRSRLGIIPQDP---NLFE-GTIRCNLDPLE-----E----HS----DREIWEALDK 1209 (1343)
Q Consensus 1148 ~~~~~G~I~IdG~di~~i~l~-~LR~~i~iVpQdp---~lF~-gTIr~NLdp~~-----~----~s----d~ei~~aL~~ 1209 (1343)
++|++|+|.+||.++...+.. .+|++++||||+| .+|. .|+++|+.... . .+ ++++.++++.
T Consensus 302 ~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 381 (501)
T PRK10762 302 LPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRL 381 (501)
T ss_pred CCCCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHh
Confidence 999999999999999876653 4678899999997 3554 59999996311 0 11 2346677777
Q ss_pred cCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEE
Q 000702 1210 SQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCT 1287 (1343)
Q Consensus 1210 ~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~ 1287 (1343)
+++. +. .+.++ ..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+
T Consensus 382 ~~l~~~~-------~~~~~----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii 450 (501)
T PRK10762 382 FNIKTPS-------MEQAI----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIIL 450 (501)
T ss_pred cCCCCCC-------ccCch----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEE
Confidence 7763 22 23333 4799999999999999999999999999999999999999999999864 4789999
Q ss_pred eccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1288 IAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1288 IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 451 vtHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 451 VSSEMPEVLGMSDRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EcCCHHHHHhhCCEEEEEECCEEEEEeccccCC
Confidence 9999999866 9999999999999999988764
No 67
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-66 Score=645.14 Aligned_cols=447 Identities=23% Similarity=0.359 Sum_probs=342.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|++++|. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 589999999984 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcccccccC-ccHHHHhccCCCCCH---HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSPMDK---AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~~~~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
++|++|++.++. .|++||+.++..... ++..++++..++. ........+|||||||||+|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-----------LDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-----------ccccCChhhCCHHHHHHHHHHHHHH
Confidence 799999987665 699999998754221 2333334433332 2234566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCccHHH
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAGTDFNA 671 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 671 (1343)
.+|+++||||||++||+...+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~----- 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD----- 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----
Confidence 9999999999999999999888876543333358999999999998764 9999999999999988876653210
Q ss_pred HHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhhhhhH
Q 000702 672 LVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKKQLVQ 751 (1343)
Q Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 751 (1343)
.... ..
T Consensus 232 ~~~~-------~~------------------------------------------------------------------- 237 (510)
T PRK15439 232 IIQA-------IT------------------------------------------------------------------- 237 (510)
T ss_pred HHHH-------Hh-------------------------------------------------------------------
Confidence 0000 00
Q ss_pred HHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHH
Q 000702 752 EEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSW 831 (1343)
Q Consensus 752 ~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~ 831 (1343)
+.. .... . ..
T Consensus 238 ------~~~----------------------------------------~~~~----~-~~------------------- 247 (510)
T PRK15439 238 ------PAA----------------------------------------REKS----L-SA------------------- 247 (510)
T ss_pred ------Ccc----------------------------------------cccc----c-cc-------------------
Confidence 000 0000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHH
Q 000702 832 FIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVM 911 (1343)
Q Consensus 832 ~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~ 911 (1343)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhh
Q 000702 912 TMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARP 991 (1343)
Q Consensus 912 ~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~ 991 (1343)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHh
Q 000702 992 FFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQY 1071 (1343)
Q Consensus 992 ~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~ 1071 (1343)
.++. .
T Consensus 248 -------------------------------------------------------------------------~~~~-~- 252 (510)
T PRK15439 248 -------------------------------------------------------------------------SQKL-W- 252 (510)
T ss_pred -------------------------------------------------------------------------cccc-c-
Confidence 0000 0
Q ss_pred hcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC
Q 000702 1072 SQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA 1151 (1343)
Q Consensus 1072 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~ 1151 (1343)
...|...+ ..+ +..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|+
T Consensus 253 ~~~~~~~~------~~~---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~ 316 (510)
T PRK15439 253 LELPGNRR------QQA---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPAR 316 (510)
T ss_pred cccccccc------ccC---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC
Confidence 00000000 000 1112489999983 2699999999999999999999999999999999999999
Q ss_pred cceEEEcCeecCCCChHH-HhhcceeecCCc---cccCC-chhhhcCCC-----C---CC--CHHHHHHHHHHcCCchHH
Q 000702 1152 CGRIIIDNIDISTIGLHD-LRSRLGIIPQDP---NLFEG-TIRCNLDPL-----E---EH--SDREIWEALDKSQLGDIV 1216 (1343)
Q Consensus 1152 ~G~I~IdG~di~~i~l~~-LR~~i~iVpQdp---~lF~g-TIr~NLdp~-----~---~~--sd~ei~~aL~~~~L~~~i 1216 (1343)
+|+|.++|.++...+... +|++|+|+||++ .+|.. |+++|+... . .. .++++.++|+..++..
T Consensus 317 ~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-- 394 (510)
T PRK15439 317 GGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF-- 394 (510)
T ss_pred CcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC--
Confidence 999999999998776654 467899999996 36654 999998421 0 11 1123556677776631
Q ss_pred hcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccc
Q 000702 1217 RGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTV 1295 (1343)
Q Consensus 1217 ~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti 1295 (1343)
...+.++ ..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+
T Consensus 395 ----~~~~~~~----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i 466 (510)
T PRK15439 395 ----NHAEQAA----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEI 466 (510)
T ss_pred ----CCccCcc----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHH
Confidence 1234444 4799999999999999999999999999999999999999999998754 378999999999999
Q ss_pred cc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1296 ID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1296 ~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
.+ ||||++|++|+++..|+++++.++
T Consensus 467 ~~~~d~i~~l~~G~i~~~~~~~~~~~~ 493 (510)
T PRK15439 467 EQMADRVLVMHQGEISGALTGAAINVD 493 (510)
T ss_pred HHhCCEEEEEECCEEEEEEccccCCHH
Confidence 76 999999999999999999887643
No 68
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.5e-65 Score=686.89 Aligned_cols=251 Identities=19% Similarity=0.262 Sum_probs=202.2
Q ss_pred HHHHHHHHHhhhHHHHHHhh--cCCCCCCCCCCCCCCCCCCCCCc--eEEEEEEEEEEc--CCCCcccccceeEecCCCE
Q 000702 1053 LSFCKLENKIISIERIYQYS--QIPGEAPPVIEDSRPPSSWPENG--TIELIDLKVRYG--ENLPLVLHGITCAFPGGKK 1126 (1343)
Q Consensus 1053 ~~~~~~e~~~~s~eRi~~~~--~~~~e~~~~~~~~~~~~~wp~~g--~I~f~nvs~~Y~--~~~~~vL~~is~~I~~Gek 1126 (1343)
+...+.|..+.++||..++. +.+.|.+.......+|. ..| .++++||+++|+ ++.+++|+|||++|+|||+
T Consensus 715 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~ 791 (1394)
T TIGR00956 715 KAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTL 791 (1394)
T ss_pred hcccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEE
Confidence 33345677788899998763 33333322111111111 133 479999999995 3345799999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcccC---CCcceEEEcCeecCCCChHHHhhcceeecCCccc-cCCchhhhcCCC------C
Q 000702 1127 IGIVGRTGSGKSTLIQALFRLIE---PACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNL-FEGTIRCNLDPL------E 1196 (1343)
Q Consensus 1127 vgIVGrTGsGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~l-F~gTIr~NLdp~------~ 1196 (1343)
+||+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++.+ +..|+||||+.. .
T Consensus 792 ~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~ 867 (1394)
T TIGR00956 792 TALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPK 867 (1394)
T ss_pred EEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCC
Confidence 99999999999999999999997 78899999999985 3578999999998764 567999999731 1
Q ss_pred CCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC-EEEEeCCCCCCCHHHHHH
Q 000702 1197 EHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR-ILVLDEATASVDTATDNL 1271 (1343)
Q Consensus 1197 ~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~-ILlLDEaTs~lD~~te~~ 1271 (1343)
+.+++ .+.++++..+|.+ -.|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||..+...
T Consensus 868 ~~~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~ 940 (1394)
T TIGR00956 868 SVSKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWS 940 (1394)
T ss_pred CCCHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHH
Confidence 23443 3567788887754 36888998888999999999999999999997 999999999999999999
Q ss_pred HHHHHHHh-cCCcEEEEeccCcccc--cccCEEEEEeCC-EEeeecChhH
Q 000702 1272 IQKIIRTE-FKDCTVCTIAHRIPTV--IDSDLVLVLSDG-RVAEFDTPGR 1317 (1343)
Q Consensus 1272 I~~~l~~~-~~~~TvI~IaHrl~ti--~~~DrIlvl~~G-~ive~g~p~e 1317 (1343)
|++.|++. .+++|||+++|+++.. ..||||++|++| +++++|++.+
T Consensus 941 i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 941 ICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999986 4689999999999974 569999999997 9999999754
No 69
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-66 Score=641.12 Aligned_cols=201 Identities=18% Similarity=0.321 Sum_probs=173.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999974 3599999999999999999999999999999999999999999999998 3579
Q ss_pred eeecCCcc--ccC-CchhhhcCCCC--CCCHHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1175 GIIPQDPN--LFE-GTIRCNLDPLE--EHSDREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1175 ~iVpQdp~--lF~-gTIr~NLdp~~--~~sd~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+|+||++. ++. .|+++|+..+. ...++++.++|+..++. +.. +.++ .+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~----~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDI-------KKSV----KVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHh-------cCcc----cccCHHHHHHHHHHHHH
Confidence 99999984 443 59999986432 23355688889998884 332 2222 57999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEe-eecChhHHhhc
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVA-EFDTPGRLLED 1321 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv-e~g~p~eLl~~ 1321 (1343)
+++|+||||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ ..|++.++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999875 4699999999999876 9999999999998 77999988754
No 70
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.8e-64 Score=573.17 Aligned_cols=544 Identities=22% Similarity=0.297 Sum_probs=413.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 124 SLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKET-FPHEGYILAGIFFSAKLVETITTRQWYLGVDI 202 (1343)
Q Consensus 124 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 202 (1343)
++++.+++ .|+.+++++++.++..+....-=.+-+++|..-.-... .....++-+++.=...+..++..+.-...+..
T Consensus 6 p~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~ 84 (573)
T COG4987 6 PYLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHD 84 (573)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34555555 77788888777777666665555555666643211000 00112222333333445555555555566677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQII--LALAILYKNVGIASVA 280 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~--~~~~~l~~~~g~~~l~ 280 (1343)
...++-+.||..+|+|....++.-....++||+.|++..||+.+++.+......+...+-++ +.+.+-+..++.+.++
T Consensus 85 AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll 164 (573)
T COG4987 85 ATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLL 164 (573)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 78899999999999999999999889999999999999999999998766655554443332 2333336777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 281 TLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF 360 (1343)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 360 (1343)
++...++.+.++..+.++.++..++..+.+....+.+.|.+.|+...+++|.++.+.+.++..-+.-.+..++.......
T Consensus 165 ~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~ 244 (573)
T COG4987 165 GLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGL 244 (573)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888889999999999999999999999999999999999999999888776544333333333333322
Q ss_pred HHHHHHHH-HHHHH-HHHHHHHHHhCCCcC-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccccc
Q 000702 361 ITFIFWSS-PIFVA-AVTFGTSILLGAQLT-AGSVLSAMATFRILQEPLRNF-PDLVSMMAQTKVSLDRISGFLQEEELQ 436 (1343)
Q Consensus 361 ~~~~~~~~-~~~~~-~~~f~~~~~~~~~lt-~~~~f~~l~l~~~l~~pl~~l-~~~~~~~~~a~~s~~Ri~~fl~~~e~~ 436 (1343)
..++.... ...++ .+.+.+...-.|..+ +..+...+..|..+ .++..+ |.++..+.+...|.+|+.+.++.+++.
T Consensus 245 ~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~ 323 (573)
T COG4987 245 SDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIASARRLNDILDQKPEV 323 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHHHHHHHhhhccCCccc
Confidence 22222111 11111 111122212223444 23333333323332 333333 378889999999999999999887654
Q ss_pred cccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-
Q 000702 437 EDATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG- 515 (1343)
Q Consensus 437 ~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g- 515 (1343)
....+..+.. +..++++|++|+|+. ++.++|+|+||++++||++||+|+||||||||+++|.|-++|++|+|..+|
T Consensus 324 ~~~~~~~~~~--~~~l~~~~vsF~y~~-~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~ 400 (573)
T COG4987 324 TFPDEQTATT--GQALELRNVSFTYPG-QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGV 400 (573)
T ss_pred CCCccccCCc--cceeeeccceeecCC-CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCc
Confidence 3321111111 126999999999864 456899999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 ------------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 ------------~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.+++++|.+.+|++|+|||+.+++| .++++..++++..+|++.++..|+|++|.+||.|..||||||
T Consensus 401 ~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~ 480 (573)
T COG4987 401 EIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGER 480 (573)
T ss_pred ChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHH
Confidence 3789999999999999999999988 578899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
||++|||++++|++++||||||.+||+.|++++++.+. ...+|||+|+||||+..++.||+|++|++|+++++|+|.++
T Consensus 481 rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~-~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~L 559 (573)
T COG4987 481 RRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLF-EHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAEL 559 (573)
T ss_pred HHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHH-HHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhh
Confidence 99999999999999999999999999999999987644 45679999999999999999999999999999999999999
Q ss_pred HhcCccHHHHH
Q 000702 663 LQAGTDFNALV 673 (1343)
Q Consensus 663 ~~~~~~~~~~~ 673 (1343)
+.+++.|.++.
T Consensus 560 l~~~g~~~~l~ 570 (573)
T COG4987 560 LANNGRYKRLY 570 (573)
T ss_pred hccccHHHHHh
Confidence 99888887764
No 71
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.3e-66 Score=642.86 Aligned_cols=213 Identities=22% Similarity=0.321 Sum_probs=176.2
Q ss_pred eEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-CcceEEEcCeecCCCCh-HHHhh
Q 000702 1096 TIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-ACGRIIIDNIDISTIGL-HDLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-~~G~I~IdG~di~~i~l-~~LR~ 1172 (1343)
.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. ..+|+
T Consensus 257 ~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~ 336 (500)
T TIGR02633 257 ILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRA 336 (500)
T ss_pred eEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 59999999999432 23599999999999999999999999999999999999995 89999999999875443 46788
Q ss_pred cceeecCCc---cccC-CchhhhcCCCC-----C---CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1173 RLGIIPQDP---NLFE-GTIRCNLDPLE-----E---HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1173 ~i~iVpQdp---~lF~-gTIr~NLdp~~-----~---~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
+++++||++ .+|. .|+++|+.... . .. .+++.+++++.++.+. -.|.++ ..|||
T Consensus 337 ~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSg 406 (500)
T TIGR02633 337 GIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTA------SPFLPI----GRLSG 406 (500)
T ss_pred CCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCC------CccCcc----ccCCH
Confidence 999999997 3665 59999997421 1 11 1346677777776321 123444 46999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecC
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~ 1314 (1343)
|||||++|||||+++|++|||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||||++|++|+++..++
T Consensus 407 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~ 486 (500)
T TIGR02633 407 GNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFV 486 (500)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEc
Confidence 99999999999999999999999999999999999999888753 47899999999999876 99999999999998776
Q ss_pred hhHH
Q 000702 1315 PGRL 1318 (1343)
Q Consensus 1315 p~eL 1318 (1343)
.+++
T Consensus 487 ~~~~ 490 (500)
T TIGR02633 487 NHAL 490 (500)
T ss_pred cccC
Confidence 5544
No 72
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-66 Score=642.04 Aligned_cols=435 Identities=22% Similarity=0.317 Sum_probs=334.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|++++|. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 589999999984 35799999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcccccccC-ccHHHHhccCCC------CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSP------MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~------~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
++|++|++.++. .|++||+.++.. .+.. +..++++.+++ .........+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgGq~qrv 149 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGV-----------DIDPDTPLKYLSIGQRQMV 149 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCC-----------CCCcCCchhhCCHHHHHHH
Confidence 899999988765 599999998642 1221 22223333322 1223456678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
+||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|+|||+++.+.. ||+|++|++|+++..++..+
T Consensus 150 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~--- 226 (501)
T PRK11288 150 EIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA--- 226 (501)
T ss_pred HHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc---
Confidence 99999999999999999999999999888876543333358999999999998765 99999999999985432100
Q ss_pred cCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhh
Q 000702 665 AGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRS 744 (1343)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1343)
. . . .
T Consensus 227 -------------------------------~---------~----------~--------------~------------ 230 (501)
T PRK11288 227 -------------------------------Q---------V----------D--------------R------------ 230 (501)
T ss_pred -------------------------------c---------C----------C--------------H------------
Confidence 0 0 0 0
Q ss_pred hhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHH
Q 000702 745 RKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMA 824 (1343)
Q Consensus 745 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~ 824 (1343)
++ +.... .. .
T Consensus 231 --------~~-------------~~~~~------------------------------~~----~--------------- 240 (501)
T PRK11288 231 --------DQ-------------LVQAM------------------------------VG----R--------------- 240 (501)
T ss_pred --------HH-------------HHHHh------------------------------cC----C---------------
Confidence 00 00000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHH
Q 000702 825 LAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQL 904 (1343)
Q Consensus 825 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~ 904 (1343)
+
T Consensus 241 --------------------------------------~----------------------------------------- 241 (501)
T PRK11288 241 --------------------------------------E----------------------------------------- 241 (501)
T ss_pred --------------------------------------C-----------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHH
Q 000702 905 VGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYL 984 (1343)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~ 984 (1343)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000702 985 LDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIIS 1064 (1343)
Q Consensus 985 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s 1064 (1343)
.
T Consensus 242 --------------------------------------------~----------------------------------- 242 (501)
T PRK11288 242 --------------------------------------------I----------------------------------- 242 (501)
T ss_pred --------------------------------------------c-----------------------------------
Confidence 0
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHH
Q 000702 1065 IERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQAL 1144 (1343)
Q Consensus 1065 ~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L 1144 (1343)
++. .+.++. + +....++++|+++. .+++|+||+|++||++||+|+||||||||+++|
T Consensus 243 -~~~-----~~~~~~-------~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l 299 (501)
T PRK11288 243 -GDI-----YGYRPR-------P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLL 299 (501)
T ss_pred -ccc-----cccccc-------C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHH
Confidence 000 000000 0 01125899999842 389999999999999999999999999999999
Q ss_pred hcccCCCcceEEEcCeecCCCCh-HHHhhcceeecCCcc---ccC-CchhhhcCCCC--C-------CC----HHHHHHH
Q 000702 1145 FRLIEPACGRIIIDNIDISTIGL-HDLRSRLGIIPQDPN---LFE-GTIRCNLDPLE--E-------HS----DREIWEA 1206 (1343)
Q Consensus 1145 ~rl~~~~~G~I~IdG~di~~i~l-~~LR~~i~iVpQdp~---lF~-gTIr~NLdp~~--~-------~s----d~ei~~a 1206 (1343)
.|+++|++|+|.+||.++...+. +.+|++++|+||+|. +|. .|+.+|+.... . .. ++++.+.
T Consensus 300 ~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (501)
T PRK11288 300 YGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRF 379 (501)
T ss_pred cCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHH
Confidence 99999999999999999875443 456789999999983 554 79999986321 0 01 1346677
Q ss_pred HHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEE
Q 000702 1207 LDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTV 1285 (1343)
Q Consensus 1207 L~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~Tv 1285 (1343)
++..++.+ +-.++++ .+||||||||++||||++.+|++|||||||++||..+.+.+.+.|++.. .+.||
T Consensus 380 l~~~~l~~------~~~~~~~----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tv 449 (501)
T PRK11288 380 IRSLNIKT------PSREQLI----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAV 449 (501)
T ss_pred HHhcCccc------CCccCcc----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEE
Confidence 77777621 1134444 4799999999999999999999999999999999999999999998754 37899
Q ss_pred EEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1286 CTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1286 I~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|+|||+++.+.. ||||++|++|++++.|++++..
T Consensus 450 iivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 450 LFVSSDLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEECCCHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 999999999865 9999999999999999998765
No 73
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.1e-64 Score=574.86 Aligned_cols=530 Identities=23% Similarity=0.321 Sum_probs=417.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 138 ALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFP---HEGYILAGIFFSAKLVETITTRQWYLGVDILGMHVRSALTAM 214 (1343)
Q Consensus 138 ~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 214 (1343)
+.+.++.+..-.+....|++++.++|.+...+..+ ......+.+++++.+..+++.-...+....+..++-......
T Consensus 33 ~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~ 112 (591)
T KOG0057|consen 33 FPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSD 112 (591)
T ss_pred HHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444456788889999999999886322212 112233444555555555555444455566777777888889
Q ss_pred HHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000702 215 VYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASV-ATLIATIISIVVT 292 (1343)
Q Consensus 215 i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l-~~~~~~~~~~~~~ 292 (1343)
+|++.+.++.+.+.+..+|++.+.|..-...+.++.. .+..+....+++.+....+++..|.+.. +.++.+..+..+.
T Consensus 113 vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~T 192 (591)
T KOG0057|consen 113 VFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFT 192 (591)
T ss_pred HHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeE
Confidence 9999999999999999999999999999988988764 5566677778888888889999996543 3344555566667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HHH
Q 000702 293 VPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEM-RGVEFRWLRKALYSQAFITFIF---WSS 368 (1343)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~-r~~e~~~~~~~~~~~~~~~~~~---~~~ 368 (1343)
+.+..+..+++++.+++.++-.+..-+.|.|...||.|+-|+.-.++.... ++.|-...+....+. +.++.. +++
T Consensus 193 i~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~-~lnfgQ~~iFsv 271 (591)
T KOG0057|consen 193 IVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLA-FLNFGQKAIFSV 271 (591)
T ss_pred EeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHH-HHHHHHHHHHHH
Confidence 777888889999999999999999999999999999999998777666543 333322222222222 111111 111
Q ss_pred HHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCC
Q 000702 369 PIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMT 448 (1343)
Q Consensus 369 ~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~ 448 (1343)
.++.++..+..-+.++.+|.+.+....+++..|..|+..+...+..+.++..-+.-+....+.++..... ..+....
T Consensus 272 -~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~i~~~ 348 (591)
T KOG0057|consen 272 -ALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALPIELF 348 (591)
T ss_pred -HHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCCcccC
Confidence 1222233344445577899999999999999999999999999999999888777665544433322211 1121223
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 449 NVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
+..|+|+|++|+|.+ ++++|+++||+|++||++||||+|||||||++++|+++++ .+|+|.+||
T Consensus 349 ~~~I~F~dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~ 425 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQ 425 (591)
T ss_pred CCcEEEEeeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhh
Confidence 346999999999864 4679999999999999999999999999999999999999 999999999
Q ss_pred eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 516 TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
.|||||||..|||+||.+||.+|++ ..+++..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+++|
T Consensus 426 ~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKd 505 (591)
T KOG0057|consen 426 SIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKD 505 (591)
T ss_pred heeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcC
Confidence 3899999999999999999999998 456677777778899999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHH
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVS 674 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~ 674 (1343)
|+|+++|||||+||.++++.+++.. .....+||+|+|.||++.+++||+|++++||++.+.|+|+|+++.++.|.+++.
T Consensus 506 a~Il~~DEaTS~LD~~TE~~i~~~i-~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~ 584 (591)
T KOG0057|consen 506 APILLLDEATSALDSETEREILDMI-MDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWT 584 (591)
T ss_pred CCeEEecCcccccchhhHHHHHHHH-HHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhc
Confidence 9999999999999999999999764 457789999999999999999999999999999999999999997777777764
Q ss_pred H
Q 000702 675 A 675 (1343)
Q Consensus 675 ~ 675 (1343)
.
T Consensus 585 ~ 585 (591)
T KOG0057|consen 585 T 585 (591)
T ss_pred c
Confidence 3
No 74
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.7e-63 Score=675.36 Aligned_cols=549 Identities=17% Similarity=0.176 Sum_probs=409.7
Q ss_pred chHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 123 PSLALAILKSFWKEA-ALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVD 201 (1343)
Q Consensus 123 ~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 201 (1343)
.+.++.+++..++.. ++.+++.++..++....|+.++...+.-..........+.+ .++++..++..++.....+...
T Consensus 952 ~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~iy~~l~i~~~~~~~~~~~~~~ 1030 (1522)
T TIGR00957 952 LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRL-SVYGALGILQGFAVFGYSMAVS 1030 (1522)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 455666776654332 23334445556667778888877665321110011111111 1222222222222222233345
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 202 ILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVA 280 (1343)
Q Consensus 202 ~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~ 280 (1343)
..+.+.-..++..+|+++++.+..++++.++|+++|++++|++.+++.+. .+..+...++.++.++++++....+.+++
T Consensus 1031 ~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~ 1110 (1522)
T TIGR00957 1031 IGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVI 1110 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66888888999999999999999999999999999999999999988654 45566666666666666555444443333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 281 TLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQAF 360 (1343)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 360 (1343)
.+.++++++.+..++.+..++.++.....++...+.+.|.++|+++||.|++|+.|.++..+..+...+...........
T Consensus 1111 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1522)
T TIGR00957 1111 IPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRW 1190 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334444445555555556656667777889999999999999999999999888776655444332221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-
Q 000702 361 ITFIFWSSPIFVAAVTFGTSILL-GAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQED- 438 (1343)
Q Consensus 361 ~~~~~~~~~~~~~~~~f~~~~~~-~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~- 438 (1343)
..........+ .++..+.+.+. .+.+++|.+.+++.+...+..|+..+...+..+..+.+|.+|+.++++.+++.+.
T Consensus 1191 ~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~ 1269 (1522)
T TIGR00957 1191 LAVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQ 1269 (1522)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 11111111111 11222333333 5779999999999999999999999999999999999999999999976644321
Q ss_pred -cccccCC-CCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-
Q 000702 439 -ATIVLPR-GMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG- 515 (1343)
Q Consensus 439 -~~~~~~~-~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g- 515 (1343)
.....+. -+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 1270 ~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~ 1348 (1522)
T TIGR00957 1270 IQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGL 1348 (1522)
T ss_pred ccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCE
Confidence 0111111 1234579999999999653 35799999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 516 ------------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 ------------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
+++||||+|.+|+|||||||....++++++..++++.|++++.+..+|+|++|.+||+|.+|||||||
T Consensus 1349 dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1428 (1522)
T TIGR00957 1349 NIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQ 1428 (1522)
T ss_pred EccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHH
Confidence 38999999999999999999843468889999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|++||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|+||++|+|++.|+|+||+
T Consensus 1429 rl~LARALLr~~~ILiLDEaTSalD~~Te~~I-q~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1429 LVCLARALLRKTKILVLDEATAAVDLETDNLI-QSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999997766 55677777899999999999999999999999999999999999999
Q ss_pred hcCccHHHHHHH
Q 000702 664 QAGTDFNALVSA 675 (1343)
Q Consensus 664 ~~~~~~~~~~~~ 675 (1343)
++++.|.++++.
T Consensus 1508 ~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1508 QQRGIFYSMAKD 1519 (1522)
T ss_pred hCCCHHHHHHHH
Confidence 888888887654
No 75
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-65 Score=632.89 Aligned_cols=436 Identities=22% Similarity=0.342 Sum_probs=329.9
Q ss_pred EeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eEEEE
Q 000702 455 ENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TAAYV 520 (1343)
Q Consensus 455 ~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i~~v 520 (1343)
+|++++|. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 67888874 35799999999999999999999999999999999999999999999987 27999
Q ss_pred ccccccc-CccHHHHhccCCC------CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhcc
Q 000702 521 SQSAWIQ-SGNIEENILFGSP------MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQ 593 (1343)
Q Consensus 521 ~Q~~~l~-~~ti~~Ni~~g~~------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~ 593 (1343)
+|++.++ +.|++||+.++.. .+..+..+.+ .+-++.+ |..........+|||||||||+||||++.
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDT-----KAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHH-----HHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 9998765 5799999998642 1221111111 1112222 22333456678899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCccHHHH
Q 000702 594 DADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAGTDFNAL 672 (1343)
Q Consensus 594 ~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 672 (1343)
+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~------- 224 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD------- 224 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-------
Confidence 999999999999999999888876433323358999999999998764 999999999999987664331000
Q ss_pred HHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhhhhhHH
Q 000702 673 VSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKKQLVQE 752 (1343)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 752 (1343)
...+
T Consensus 225 -------------------------------------------------------------~~~~--------------- 228 (491)
T PRK10982 225 -------------------------------------------------------------KIIA--------------- 228 (491)
T ss_pred -------------------------------------------------------------HHHH---------------
Confidence 0000
Q ss_pred HHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Q 000702 753 EERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWF 832 (1343)
Q Consensus 753 e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~ 832 (1343)
...|.
T Consensus 229 --~~~~~------------------------------------------------------------------------- 233 (491)
T PRK10982 229 --MMVGR------------------------------------------------------------------------- 233 (491)
T ss_pred --HHhCC-------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHH
Q 000702 833 IFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMT 912 (1343)
Q Consensus 833 ~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~ 912 (1343)
T Consensus 234 -------------------------------------------------------------------------------- 233 (491)
T PRK10982 234 -------------------------------------------------------------------------------- 233 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhH
Q 000702 913 MVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPF 992 (1343)
Q Consensus 913 ~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~ 992 (1343)
T Consensus 234 -------------------------------------------------------------------------------- 233 (491)
T PRK10982 234 -------------------------------------------------------------------------------- 233 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Q 000702 993 FCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYS 1072 (1343)
Q Consensus 993 ~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~ 1072 (1343)
.. .+
T Consensus 234 -----------------------------------~~------------------------------------~~----- 237 (491)
T PRK10982 234 -----------------------------------SL------------------------------------TQ----- 237 (491)
T ss_pred -----------------------------------Cc------------------------------------cc-----
Confidence 00 00
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCc
Q 000702 1073 QIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPAC 1152 (1343)
Q Consensus 1073 ~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~ 1152 (1343)
..+.+. .+ +....|+++|++++| .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++
T Consensus 238 ~~~~~~-------~~----~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~ 302 (491)
T PRK10982 238 RFPDKE-------NK----PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSA 302 (491)
T ss_pred cccccc-------CC----CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCc
Confidence 000000 00 112259999999975 249999999999999999999999999999999999999999
Q ss_pred ceEEEcCeecCCCChH-HHhhcceeecCCcc---ccC-Cchhhh-----cCCC----CCCC----HHHHHHHHHHcCCch
Q 000702 1153 GRIIIDNIDISTIGLH-DLRSRLGIIPQDPN---LFE-GTIRCN-----LDPL----EEHS----DREIWEALDKSQLGD 1214 (1343)
Q Consensus 1153 G~I~IdG~di~~i~l~-~LR~~i~iVpQdp~---lF~-gTIr~N-----Ldp~----~~~s----d~ei~~aL~~~~L~~ 1214 (1343)
|+|.+||.+++..+.. .+|+.++|+||++. +|. .|+++| +... ...+ ++++.+.++..++.+
T Consensus 303 G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 382 (491)
T PRK10982 303 GTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT 382 (491)
T ss_pred cEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC
Confidence 9999999999877654 35778999999963 555 366655 3211 1011 223455666665531
Q ss_pred HHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcc
Q 000702 1215 IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIP 1293 (1343)
Q Consensus 1215 ~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ 1293 (1343)
+.+|.++ .+||||||||++||||++++|+||||||||++||+.+...+.+.|++.. ++.|||+|||+++
T Consensus 383 ------~~~~~~~----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~ 452 (491)
T PRK10982 383 ------PGHRTQI----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP 452 (491)
T ss_pred ------CCccccc----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH
Confidence 1134444 5799999999999999999999999999999999999999999997753 4789999999999
Q ss_pred cccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1294 TVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1294 ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
.+.. ||||++|++|+++..++++++.
T Consensus 453 ~~~~~~d~v~~l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 453 ELLGITDRILVMSNGLVAGIVDTKTTT 479 (491)
T ss_pred HHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9865 9999999999999888775443
No 76
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.3e-65 Score=632.38 Aligned_cols=439 Identities=22% Similarity=0.326 Sum_probs=333.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------A 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i 517 (1343)
.++++|++++|. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 488999999984 246999999999999999999999999999999999999999999998652 6
Q ss_pred EEEcccccc---------cCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSAWI---------QSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~~l---------~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|++.. +..|+++|+.++.. ++++.+++++..++.+ .......+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITA-----------LLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHh-----------hhhCCcccCCHHHHHHHHHH
Confidence 899998643 24689999876532 2334455555554432 23356678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAGT 667 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 667 (1343)
||++.+|++|||||||++||+...+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|+++..|+.+++.....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 99999999999999999999999888876543323358999999999998765 99999999999999888766532100
Q ss_pred cHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhhh
Q 000702 668 DFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRKK 747 (1343)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (1343)
... . . .
T Consensus 228 -~~~-----------~----------------------~----------------------------------~------ 233 (490)
T PRK10938 228 -VAQ-----------L----------------------A----------------------------------H------ 233 (490)
T ss_pred -hhh-----------h----------------------h----------------------------------h------
Confidence 000 0 0 0
Q ss_pred hhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHHH
Q 000702 748 QLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAF 827 (1343)
Q Consensus 748 ~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~ 827 (1343)
.+ . +... ..+
T Consensus 234 ----~~-~----------------------------------------------~~~~---~~~---------------- 243 (490)
T PRK10938 234 ----SE-Q----------------------------------------------LEGV---QLP---------------- 243 (490)
T ss_pred ----hh-c----------------------------------------------cCcc---ccC----------------
Confidence 00 0 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHH
Q 000702 828 GSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGI 907 (1343)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~ 907 (1343)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHh
Q 000702 908 IGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDC 987 (1343)
Q Consensus 908 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~ 987 (1343)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Q 000702 988 FARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIER 1067 (1343)
Q Consensus 988 ~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eR 1067 (1343)
+
T Consensus 244 -------------------------------------------------------------------------------~ 244 (490)
T PRK10938 244 -------------------------------------------------------------------------------E 244 (490)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcc
Q 000702 1068 IYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRL 1147 (1343)
Q Consensus 1068 i~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl 1147 (1343)
..+... .. ..+ .....|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 245 -------~~~~~~--~~-~~~---~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~ 309 (490)
T PRK10938 245 -------PDEPSA--RH-ALP---ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGD 309 (490)
T ss_pred -------cccccc--cc-ccC---CCCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCC
Confidence 000000 00 000 01225999999999974 3599999999999999999999999999999999998
Q ss_pred cCC-CcceEEEcCeecCC-CChHHHhhcceeecCCccccC---CchhhhcCCC--C------CCC---HHHHHHHHHHcC
Q 000702 1148 IEP-ACGRIIIDNIDIST-IGLHDLRSRLGIIPQDPNLFE---GTIRCNLDPL--E------EHS---DREIWEALDKSQ 1211 (1343)
Q Consensus 1148 ~~~-~~G~I~IdG~di~~-i~l~~LR~~i~iVpQdp~lF~---gTIr~NLdp~--~------~~s---d~ei~~aL~~~~ 1211 (1343)
.++ ++|+|.++|.++.. ......|++++++||++.++. .|+++++... . ... ++++.++++..+
T Consensus 310 ~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 389 (490)
T PRK10938 310 HPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILG 389 (490)
T ss_pred CCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcC
Confidence 875 69999999987642 233456889999999987642 4677775321 1 111 235678888888
Q ss_pred Cch-HHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEe
Q 000702 1212 LGD-IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-D-CTVCTI 1288 (1343)
Q Consensus 1212 L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~-~TvI~I 1288 (1343)
+.+ .. +.++ ..||||||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ + +|||+|
T Consensus 390 l~~~~~-------~~~~----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviiv 458 (490)
T PRK10938 390 IDKRTA-------DAPF----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFV 458 (490)
T ss_pred Cchhhc-------cCch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEE
Confidence 764 32 2233 47999999999999999999999999999999999999999999998643 3 479999
Q ss_pred ccCcccccc--cCEEEEEeCCEEeeec
Q 000702 1289 AHRIPTVID--SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1289 aHrl~ti~~--~DrIlvl~~G~ive~g 1313 (1343)
||+++.+.. ||||++|++|++++.-
T Consensus 459 sHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 459 SHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred ecchhhhhhhhheeEEEecCCceEEee
Confidence 999999974 7999999999998764
No 77
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.8e-62 Score=653.00 Aligned_cols=216 Identities=18% Similarity=0.220 Sum_probs=188.4
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
...|+++|++++|+....++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997543569999999999999999999999999999999999999999999999999975 45677889
Q ss_pred ceeecCCccccCC-chhhhcCCC---CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPL---EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~---~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
|||+||++.++.. |++|||..+ ...+. +.+.++++.++|.++..+.+ ..||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998865 999999632 11222 33556788899877654332 46899999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999998853 57999999999999876 999999999999999999999754
No 78
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.6e-64 Score=626.57 Aligned_cols=203 Identities=22% Similarity=0.286 Sum_probs=168.8
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .+|
T Consensus 323 ~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 469999999999653 599999999999999999999999999999999999999999999954 2 159
Q ss_pred eeecCCc-cccC-CchhhhcCCCCC-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1175 GIIPQDP-NLFE-GTIRCNLDPLEE-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1175 ~iVpQdp-~lF~-gTIr~NLdp~~~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
+|+||++ .++. -|+++|+..... ..+.+..++++..++.+.. ++..+ ..||||||||++||||
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qrv~la~a 459 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD------QQKKV----GVLSGGERNRLHLAKT 459 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999997 5665 499999863211 1234456677877774211 22333 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeC-CEEee-ecChhHHhhcC
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSD-GRVAE-FDTPGRLLEDK 1322 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~-G~ive-~g~p~eLl~~~ 1322 (1343)
++.+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. ||||++|++ |++.+ .|+++++++++
T Consensus 460 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 460 LKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999875 4 489999999998876 999999996 88874 67888887653
No 79
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=9.4e-65 Score=557.88 Aligned_cols=457 Identities=26% Similarity=0.431 Sum_probs=350.8
Q ss_pred eEEEEeeEEEecC-CCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000702 451 AIQIENAEFCWYP-SSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG--------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~-~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g--------- 515 (1343)
.++++|++..|.. ++...++++|||++++||.+|+||+||||||-..++++|+++. -+|+|.++|
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 5788888877753 3356799999999999999999999999999999999999985 468999887
Q ss_pred --------eEEEEcccccc-cC--cc----HHHHhccCCCCCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCC
Q 000702 516 --------TAAYVSQSAWI-QS--GN----IEENILFGSPMDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGIN 576 (1343)
Q Consensus 516 --------~i~~v~Q~~~l-~~--~t----i~~Ni~~g~~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~ 576 (1343)
+|+.++|+|-- .| -| |.|-|......+. ++..+.++..++.+- ...+......
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCcc
Confidence 48999999963 22 23 4455555444332 223333333333221 1234456778
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000702 577 LSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRI 653 (1343)
Q Consensus 577 LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i 653 (1343)
|||||||||-||-||..+|++||-||||.|||..+..+|++. ++.+. .|..+++|||++..+.. ||+|+||.+|++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~L-l~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~i 236 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDL-LKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEI 236 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHH-HHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEE
Confidence 999999999999999999999999999999999999999864 44332 38999999999999876 999999999999
Q ss_pred EEecChHHHHhcCcc-HHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHH
Q 000702 654 IQAGKYDDLLQAGTD-FNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQ 732 (1343)
Q Consensus 654 ~~~g~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (1343)
+|+|+.+++...... |.+..-
T Consensus 237 vE~~~t~~lF~~PqHpYTr~Ll---------------------------------------------------------- 258 (534)
T COG4172 237 VETGTTETLFAAPQHPYTRKLL---------------------------------------------------------- 258 (534)
T ss_pred eecCcHHHHhhCCCChHHHHHH----------------------------------------------------------
Confidence 999998877642110 000000
Q ss_pred HHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCC
Q 000702 733 KAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPK 812 (1343)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 812 (1343)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchh
Q 000702 813 VNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPF 892 (1343)
Q Consensus 813 ~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~ 892 (1343)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecC
Q 000702 893 RLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFG 972 (1343)
Q Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~ 972 (1343)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000702 973 QEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWI 1052 (1343)
Q Consensus 973 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~ 1052 (1343)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCC---------CCcccccceeEecC
Q 000702 1053 LSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGEN---------LPLVLHGITCAFPG 1123 (1343)
Q Consensus 1053 ~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~---------~~~vL~~is~~I~~ 1123 (1343)
..|+ .+..+|..-...--++.+||.+.|+-. .-.+.+||||+.++
T Consensus 259 ----------------------~aeP----~g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~ 312 (534)
T COG4172 259 ----------------------AAEP----SGDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRR 312 (534)
T ss_pred ----------------------hcCC----CCCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecC
Confidence 0000 000011111122346777777777421 12479999999999
Q ss_pred CCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---HhhcceeecCCccc-cC--CchhhhcC----
Q 000702 1124 GKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LRSRLGIIPQDPNL-FE--GTIRCNLD---- 1193 (1343)
Q Consensus 1124 GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR~~i~iVpQdp~l-F~--gTIr~NLd---- 1193 (1343)
||.+||||+||||||||-.+|+|+++++ |+|.++|.||...+.++ +|+++-+|+|||+= ++ .||-+-+.
T Consensus 313 gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~ 391 (534)
T COG4172 313 GQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLR 391 (534)
T ss_pred CCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhh
Confidence 9999999999999999999999999876 99999999999988776 78999999999971 11 24444332
Q ss_pred CCC-CC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHH
Q 000702 1194 PLE-EH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTAT 1268 (1343)
Q Consensus 1194 p~~-~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~t 1268 (1343)
-.. .. .|+.+.+||+.+||+.-..+. -...||||||||+|||||+.-+|++++||||||+||..-
T Consensus 392 vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~R----------YPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SV 461 (534)
T COG4172 392 VHEPKLSAAERDQRVIEALEEVGLDPATRNR----------YPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSV 461 (534)
T ss_pred hcCCCCCHHHHHHHHHHHHHHcCCChhHhhc----------CCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHH
Confidence 111 22 356689999999998755432 125699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHH-HHHH
Q 000702 1269 DNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFL-KLVT 1331 (1343)
Q Consensus 1269 e~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~-~l~~ 1331 (1343)
.++|.+.|++.- .+-+-++|+|+|..++. ||+|+||.+|+|||+|+-+++++++...|. +|+.
T Consensus 462 QaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~~L~~ 528 (534)
T COG4172 462 QAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTRALLA 528 (534)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHHHHHH
Confidence 999999998764 36799999999999976 999999999999999999999999988775 4444
No 80
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4e-63 Score=674.05 Aligned_cols=474 Identities=19% Similarity=0.221 Sum_probs=374.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 841 ATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLL 920 (1343)
Q Consensus 841 ~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (1343)
...+.+....+...+++++++.|..++++.++|+++||+++|++.++... ..+..++...+.++++++++...-....+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 45667777778889999999999999999999999999999999999875 44555555554444443333221001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 000702 921 LVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIE 1000 (1343)
Q Consensus 921 ~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1000 (1343)
+.++++++++.+..++.+..+..++.....+....+.+.|.++|+++||+|++|+.+.+++.+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222344445555666666667777788999999999999999999999999988877665554443333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCCC
Q 000702 1001 WLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPP 1080 (1343)
Q Consensus 1001 wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1080 (1343)
+.......... ++.++.+.......+.++++.+..++++...+..++..+...+..+.....|.+|+.++++.+++...
T Consensus 525 ~~~~~~~~~~~-~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPV-VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 32222211111 11111222222346789999999999999999999999999999999999999999999976543211
Q ss_pred CCCCCCCCCCCCCCceEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcC
Q 000702 1081 VIEDSRPPSSWPENGTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDN 1159 (1343)
Q Consensus 1081 ~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG 1159 (1343)
. .+ ...+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 604 ~----~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 Q----NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred c----cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 11 111234579999999999753 35799999999999999999999999999999999999999999773
Q ss_pred eecCCCChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1160 IDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1160 ~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
.+|++|+||||+|.+|+|||||||..+.++++++++++++.|+|.+++..+|+|+||.|||+|.+||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 46889999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHH-HHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQ-KIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~-~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||||||||++++|+|+|||||||+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+|+|.|+|+||
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL 826 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAEL 826 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999999999999775 557766789999999999999999999999999999999999999
Q ss_pred hhcCCcHHHHHHHHhc
Q 000702 1319 LEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1319 l~~~~~~f~~l~~~~~ 1334 (1343)
++ +++.|+++++...
T Consensus 827 ~~-~~~~~~~l~~~~~ 841 (1495)
T PLN03232 827 SK-SGSLFKKLMENAG 841 (1495)
T ss_pred Hh-cchhHHHHHHhcc
Confidence 97 4688999987543
No 81
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.4e-62 Score=662.85 Aligned_cols=549 Identities=16% Similarity=0.174 Sum_probs=389.4
Q ss_pred chHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 123 PSLALAILKSFWKE--AALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGV 200 (1343)
Q Consensus 123 ~~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 200 (1343)
.+.++.+++..++. +++.+++.++..++....|+.++...+....... ....| .+++++..++..++.....+..
T Consensus 901 ~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~~~~--~~i~~~l~~~~~i~~~~~~~~~ 977 (1622)
T PLN03130 901 WKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTH-GPLFY--NLIYALLSFGQVLVTLLNSYWL 977 (1622)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-chhHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666654322 2222333444556666777777766653221111 11112 2222223333333333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 201 DILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASV 279 (1343)
Q Consensus 201 ~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l 279 (1343)
.+.+.+.-..|+..+|+++++.+..+++++++|+++|++++|++.+++... .+..+....+.++.+++++.....+..+
T Consensus 978 ~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~ 1057 (1622)
T PLN03130 978 IMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLW 1057 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888999999999999999999999999999999999999988654 4455555555555555444332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 280 ATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQA 359 (1343)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~ 359 (1343)
+.+.++++++.+..++.+..++.++.....+....+.+.|.++|+++||.|++|+.|.+...+..+...+..........
T Consensus 1058 ~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1137 (1622)
T PLN03130 1058 AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNR 1137 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222333333444445555555666777889999999999999999998887766555444332221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-CCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000702 360 FITFIFWSSPIFVAAVTFGTSILLG-AQLT-----AGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEE 433 (1343)
Q Consensus 360 ~~~~~~~~~~~~~~~~~f~~~~~~~-~~lt-----~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~ 433 (1343)
...........++ ++..+.+.+.. +... ++.+-.++++...+..++..+......+..+.+|++|+.++++.|
T Consensus 1138 wl~~~l~~~~~~~-i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~ 1216 (1622)
T PLN03130 1138 WLAIRLETLGGLM-IWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLP 1216 (1622)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 1111000111111 11122222332 2111 233333444555666777777777888899999999999999876
Q ss_pred cccccccc-c-cCC-CCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcE
Q 000702 434 ELQEDATI-V-LPR-GMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGE 510 (1343)
Q Consensus 434 e~~~~~~~-~-~~~-~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~ 510 (1343)
++.+.... . .+. .+..+.|+|+|++|+|.++ .+++|+|+||+|++||++||||+||||||||+++|+|+++|++|+
T Consensus 1217 ~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~ 1295 (1622)
T PLN03130 1217 SEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGR 1295 (1622)
T ss_pred CcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCce
Confidence 54321110 1 111 1223579999999999643 357999999999999999999999999999999999999999999
Q ss_pred EEECC-------------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCC
Q 000702 511 VRLCG-------------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINL 577 (1343)
Q Consensus 511 i~~~g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 577 (1343)
|.+|| +++||||+|.+|+|||||||.++.++++++..++++.|++++.++.+|+|++|.|||+|.+|
T Consensus 1296 I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nL 1375 (1622)
T PLN03130 1296 ILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENF 1375 (1622)
T ss_pred EEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCC
Confidence 99998 38999999999999999999999889999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000702 578 SGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAG 657 (1343)
Q Consensus 578 SgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g 657 (1343)
|||||||+|||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|+||++|+|++.|
T Consensus 1376 SgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~I-q~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~G 1454 (1622)
T PLN03130 1376 SVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALI-QKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFD 1454 (1622)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999998776 45677777899999999999999999999999999999999
Q ss_pred ChHHHHhc-CccHHHHHHHHH
Q 000702 658 KYDDLLQA-GTDFNALVSAHH 677 (1343)
Q Consensus 658 ~~~~l~~~-~~~~~~~~~~~~ 677 (1343)
+|+||+++ ++.|.++++...
T Consensus 1455 t~~eLl~~~~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1455 TPENLLSNEGSAFSKMVQSTG 1475 (1622)
T ss_pred CHHHHHhCCCCHHHHHHHHcC
Confidence 99999987 578888876543
No 82
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.1e-62 Score=612.97 Aligned_cols=472 Identities=16% Similarity=0.187 Sum_probs=367.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHH
Q 000702 829 SSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGII 908 (1343)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~ 908 (1343)
..++.+++.++....+.+...+++.++++++++.|++||+++++|++++|+++|++.+...+. .+..++..++.+++.+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~ 139 (547)
T PRK10522 61 LMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSA 139 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 344567788888889999999999999999999999999999999999999999999987654 4677788888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcH---HHHHHHHHHHH
Q 000702 909 GVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQE---KRFMKRNLYLL 985 (1343)
Q Consensus 909 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~---~~~~~~~~~~~ 985 (1343)
+++++++|.+++++++.+++.+++..++.+..+...+......+.+.+++.|.++|+.+++ ++.+ +.+.+++.+..
T Consensus 140 ~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~ 218 (547)
T PRK10522 140 AYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDA 218 (547)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHH
Confidence 9999999999887777666666666666666666666667778889999999999999995 5543 35566666665
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000702 986 DCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISI 1065 (1343)
Q Consensus 986 d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~ 1065 (1343)
+...+..................+..++ ++.++......+..+.+.+++...+...+..++..+...+.++.....+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~ 296 (547)
T PRK10522 219 QEYRHHIIRADTFHLSAVNWSNIMMLGA--IGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAF 296 (547)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5554433322111111111111111111 11111111111112333344444444556688899999999999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHh
Q 000702 1066 ERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALF 1145 (1343)
Q Consensus 1066 eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~ 1145 (1343)
+|+.++.+.+.+++.. ...+. |..+.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+
T Consensus 297 ~ri~~l~~~~~~~~~~--~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~ 370 (547)
T PRK10522 297 NKLNKLALAPYKAEFP--RPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLT 370 (547)
T ss_pred HHHHHHhccccccccc--ccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 9999987654432111 11111 223579999999999743 46999999999999999999999999999999999
Q ss_pred cccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCc
Q 000702 1146 RLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLET 1225 (1343)
Q Consensus 1146 rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt 1225 (1343)
|+++|++|+|.+||+|+++++.+++|+++++|||||.+|++|+++| ..+.+|++++++++++++.+.+.. ++|.
T Consensus 371 g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-- 444 (547)
T PRK10522 371 GLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-- 444 (547)
T ss_pred CCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC--
Confidence 9999999999999999999999999999999999999999999999 245778899999999998877652 4332
Q ss_pred ccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEE
Q 000702 1226 PVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLV 1303 (1343)
Q Consensus 1226 ~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlv 1303 (1343)
.+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.+.+.. +++|+|+||||++++..||+|++
T Consensus 445 ---~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~ 521 (547)
T PRK10522 445 ---ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLE 521 (547)
T ss_pred ---CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEE
Confidence 1478999999999999999999999999999999999999999999997655 47999999999999999999999
Q ss_pred EeCCEEeee-cChhHHh
Q 000702 1304 LSDGRVAEF-DTPGRLL 1319 (1343)
Q Consensus 1304 l~~G~ive~-g~p~eLl 1319 (1343)
|++|+++|. |++.+-.
T Consensus 522 l~~G~i~e~~~~~~~~~ 538 (547)
T PRK10522 522 MRNGQLSELTGEERDAA 538 (547)
T ss_pred EECCEEEEecCCchhhh
Confidence 999999988 4554443
No 83
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.4e-63 Score=623.04 Aligned_cols=480 Identities=24% Similarity=0.357 Sum_probs=335.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--eEEEEcccccccC
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--TAAYVSQSAWIQS 528 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--~i~~v~Q~~~l~~ 528 (1343)
.++++|++++|++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++ .++|++|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999842 35799999999999999999999999999999999999999999999975 6999999998874
Q ss_pred -ccHHHHhccCCCC------------------CH---------HHHHHHHHHhhhhh-------hHhhccCCCccccCCC
Q 000702 529 -GNIEENILFGSPM------------------DK---------AKYKKVIHACSLKK-------DLELFSHGDQTIIGDR 573 (1343)
Q Consensus 529 -~ti~~Ni~~g~~~------------------~~---------~~~~~~~~~~~l~~-------~~~~l~~g~~t~ig~~ 573 (1343)
.|++|||.++... ++ .++.++++.++..+ -++.+ |.. .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cccCc
Confidence 6999999876310 01 12233333443221 11222 221 13556
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000702 574 GINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGR 652 (1343)
Q Consensus 574 g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~ 652 (1343)
..+|||||||||+||||++.+|+++||||||++||+.+.+++.+ .+... ++|+|+|||+++++.. ||+|++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 78999999999999999999999999999999999999887765 45443 4699999999999875 99999999999
Q ss_pred EE-EecChHHHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhH
Q 000702 653 II-QAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASE 731 (1343)
Q Consensus 653 i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (1343)
++ +.|+++++.+... ...+.
T Consensus 236 i~~~~g~~~~~~~~~~----------~~~~~------------------------------------------------- 256 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKE----------KRLEQ------------------------------------------------- 256 (552)
T ss_pred EEEecCCHHHHHHHHH----------HHHHH-------------------------------------------------
Confidence 75 7899988754210 00000
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCC
Q 000702 732 QKAIKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQP 811 (1343)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 811 (1343)
.....+. ...+....+. |+. .
T Consensus 257 ~~~~~~~------~~~~~~~~~~-------------------------------------------~~~---~------- 277 (552)
T TIGR03719 257 EEKEESA------RQKALKRELE-------------------------------------------WVR---S------- 277 (552)
T ss_pred HHHHHHH------HHHHHHHHHH-------------------------------------------HHH---h-------
Confidence 0000000 0000000000 000 0
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccch
Q 000702 812 KVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIP 891 (1343)
Q Consensus 812 ~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~ 891 (1343)
.+
T Consensus 278 --------------------------------------------------~~---------------------------- 279 (552)
T TIGR03719 278 --------------------------------------------------SP---------------------------- 279 (552)
T ss_pred --------------------------------------------------hh----------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeec
Q 000702 892 FRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGF 971 (1343)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf 971 (1343)
..++.
T Consensus 280 -----------------------------------------------~~~~~---------------------------- 284 (552)
T TIGR03719 280 -----------------------------------------------KARQA---------------------------- 284 (552)
T ss_pred -----------------------------------------------hhHHH----------------------------
Confidence 00000
Q ss_pred CcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 000702 972 GQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRW 1051 (1343)
Q Consensus 972 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~ 1051 (1343)
+
T Consensus 285 --------~----------------------------------------------------------------------- 285 (552)
T TIGR03719 285 --------K----------------------------------------------------------------------- 285 (552)
T ss_pred --------H-----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEc
Q 000702 1052 ILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVG 1131 (1343)
Q Consensus 1052 ~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVG 1131 (1343)
.+......++..+. . ++..+.......+...-+.+..|+++|++++|+. .++|+|+||+|++||++||+|
T Consensus 286 ------~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G 355 (552)
T TIGR03719 286 ------SKARLARYEELLSQ-E-FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIG 355 (552)
T ss_pred ------HHHHHHHHHhhhhh-c-ccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEEC
Confidence 00000000111000 0 0000000000000000012235999999999964 359999999999999999999
Q ss_pred CCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCcc-ccC-CchhhhcCCCC---CC--CHHHHH
Q 000702 1132 RTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPN-LFE-GTIRCNLDPLE---EH--SDREIW 1204 (1343)
Q Consensus 1132 rTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~-lF~-gTIr~NLdp~~---~~--sd~ei~ 1204 (1343)
+||||||||+++|.|++.|++|+|.+++ + .+|+|+||++. ++. -|+++|+.... .. .+.+..
T Consensus 356 ~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~ 424 (552)
T TIGR03719 356 PNGAGKSTLFRMITGQEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSR 424 (552)
T ss_pred CCCCCHHHHHHHHcCCCCCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHH
Confidence 9999999999999999999999999954 2 16999999973 564 49999996421 11 133455
Q ss_pred HHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcE
Q 000702 1205 EALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCT 1284 (1343)
Q Consensus 1205 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~T 1284 (1343)
++++..++.+.. .+.++ ..||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. . .|
T Consensus 425 ~~l~~~~l~~~~------~~~~~----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~ 492 (552)
T TIGR03719 425 AYVGRFNFKGSD------QQKKV----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GC 492 (552)
T ss_pred HHHHhCCCChhH------hcCch----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-Ce
Confidence 677777774321 12233 479999999999999999999999999999999999999999999976 3 48
Q ss_pred EEEeccCcccccc-cCEEEEEeC-CEEeee-cChhHHhhc
Q 000702 1285 VCTIAHRIPTVID-SDLVLVLSD-GRVAEF-DTPGRLLED 1321 (1343)
Q Consensus 1285 vI~IaHrl~ti~~-~DrIlvl~~-G~ive~-g~p~eLl~~ 1321 (1343)
||+|||+++.+.. ||||++|++ |++.++ |+++++.+.
T Consensus 493 viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 493 AVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred EEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHH
Confidence 9999999999876 999999997 688744 777776543
No 84
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-64 Score=562.19 Aligned_cols=539 Identities=22% Similarity=0.308 Sum_probs=410.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCch-hHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Q 000702 133 FWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPH-EGYILAGIFFSAKLV--ETITTRQWYLGVDILGMHVRS 209 (1343)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~-~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~ir~ 209 (1343)
..-..+.+.++..+.-++....|.+.+.+.+.+..+....+ ..+.++++-++-... ..+....-.+..-++..--..
T Consensus 213 lql~v~~cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR 292 (790)
T KOG0056|consen 213 LQLRVVFCLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTR 292 (790)
T ss_pred hhHHHHHHHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHH
Confidence 33444555666667777888889999999998875443222 122232222221110 112222222222334444455
Q ss_pred HHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000702 210 ALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWY-LHDIWMLPLQIILALAILYK-NVGIASVATLIATII 287 (1343)
Q Consensus 210 ~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~~~~i~~~~~~l~~-~~g~~~l~~~~~~~~ 287 (1343)
.+...+|+|.+.|+....-+.++|+++..|....+.+. +..+ ..++....+.++++++.++. ...|-.++.++++.+
T Consensus 293 ~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~l 371 (790)
T KOG0056|consen 293 EIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLL 371 (790)
T ss_pred HHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHH
Confidence 67789999999999998888899999988877666655 3322 23333334455555543332 222444444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 288 SIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWED----RYRIQLEEMRGVEFRWLRKALYSQAFITF 363 (1343)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~----~~~~~i~~~r~~e~~~~~~~~~~~~~~~~ 363 (1343)
++-+.+.+.....++++++...-.+....-.+.+-|.+++|.|+.|+ ++.+.|.+..+.|-+.+.....+......
T Consensus 372 Y~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~ 451 (790)
T KOG0056|consen 372 YCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNG 451 (790)
T ss_pred HhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 55555555666677777777666666677889999999999999886 45555666666665543333333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccc
Q 000702 364 IFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVL 443 (1343)
Q Consensus 364 ~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~ 443 (1343)
++ ...++....+.+|.+..+.+|.|....+.+|+-.+..|++.+......++...+-++|+.+.++++++..+.....
T Consensus 452 Ii--~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~ 529 (790)
T KOG0056|consen 452 II--GLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAP 529 (790)
T ss_pred hh--hhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCC
Confidence 21 1112233445667777889999999999999999999999999999999999999999999998876554433223
Q ss_pred CCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------
Q 000702 444 PRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------- 515 (1343)
Q Consensus 444 ~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------- 515 (1343)
|-....+.|+++|++|.|++ ++|+|+||||++.||+.+|+|||||+||||++++|.++++..+|+|.+||
T Consensus 530 pl~~~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~ 607 (790)
T KOG0056|consen 530 PLKVTQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQ 607 (790)
T ss_pred CccccCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHH
Confidence 33334567999999999965 58999999999999999999999999999999999999999999999999
Q ss_pred -----eEEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
.||.||||..+||+||..||.+|++ ..+++..++.+|+++++.+-.+|+|++|.|||+|-.||||+|||||+||
T Consensus 608 ~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiAR 687 (790)
T KOG0056|consen 608 SSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIAR 687 (790)
T ss_pred HHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHH
Confidence 3899999999999999999999988 4566777888999999999999999999999999999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc-Ccc
Q 000702 590 ALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA-GTD 668 (1343)
Q Consensus 590 al~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~ 668 (1343)
+++++|.|++|||+|||||.++++.| +.++.....++|.|+|+||++++-+||.|++++||+|+|.|+|+|+++. ++.
T Consensus 688 tiLK~P~iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~ 766 (790)
T KOG0056|consen 688 TILKAPSIILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGA 766 (790)
T ss_pred HHhcCCcEEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCc
Confidence 99999999999999999999998887 6788888899999999999999999999999999999999999999987 889
Q ss_pred HHHHHHHHH
Q 000702 669 FNALVSAHH 677 (1343)
Q Consensus 669 ~~~~~~~~~ 677 (1343)
|.++++.+.
T Consensus 767 Ya~MWq~qq 775 (790)
T KOG0056|consen 767 YADMWQAQQ 775 (790)
T ss_pred HHHHHHHHH
Confidence 999986544
No 85
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=8.7e-61 Score=649.72 Aligned_cols=471 Identities=16% Similarity=0.179 Sum_probs=366.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 204 GMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIASVATL 282 (1343)
Q Consensus 204 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~ 282 (1343)
+.+....++..+|+++++.+..++++.++|+++|++++|++.+++.+. .+..++...+.++.++++++...++.+++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445788999999999999999999999999999999999988654 4555556666666655555444333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH----HHHHH
Q 000702 283 IATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRK----ALYSQ 358 (1343)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~----~~~~~ 358 (1343)
.++++++.+..++.+..++.++......+...+.++|.++|+++||.|++|+.+.++..+.-+...+.... ..+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333444555566666666667777788999999999999999999998888776554433332211 11221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-
Q 000702 359 AFITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQE- 437 (1343)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~- 437 (1343)
....++.......+.++....+....+.+++|.+..++.+...+..|+..+...+..+..+..|++|+.++++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 1111111111111111111122222345789988888888889999999999999999999999999999996322111
Q ss_pred cc------------------------cccc-----CCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcC
Q 000702 438 DA------------------------TIVL-----PRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGM 488 (1343)
Q Consensus 438 ~~------------------------~~~~-----~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~ 488 (1343)
.. .... +.....+.|+|+|++|+|++ +.+++|+|+||+|++||++||||+
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~-~~~~vL~~vsf~I~~GekVaIVGr 1344 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYRE-GLPLVLRGVSFRIAPREKVGIVGR 1344 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCC-CCCceeecceEEECCCCEEEEECC
Confidence 00 0000 01112346999999999964 335699999999999999999999
Q ss_pred CCCCHHHHHHHHhcCccCCCcEEEECC-------------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhh
Q 000702 489 VGSGKSSLLSCILGEIPKISGEVRLCG-------------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSL 555 (1343)
Q Consensus 489 ~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l 555 (1343)
||||||||+++|+|+++|++|+|.+|| .++||||+|.+|+|||||||..+.++++++++++++.|++
T Consensus 1345 TGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l 1424 (1560)
T PTZ00243 1345 TGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGL 1424 (1560)
T ss_pred CCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCC
Confidence 999999999999999999999999998 3799999999999999999998778899999999999999
Q ss_pred hhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEec
Q 000702 556 KKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD-ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTH 634 (1343)
Q Consensus 556 ~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~-~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH 634 (1343)
++.+..+|+|++|.+||+|.+|||||||||+|||||+++ |+|||||||||+||+++++.| ++.++...+++|+|+|||
T Consensus 1425 ~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I-q~~L~~~~~~~TvI~IAH 1503 (1560)
T PTZ00243 1425 RERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI-QATVMSAFSAYTVITIAH 1503 (1560)
T ss_pred hHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH-HHHHHHHCCCCEEEEEec
Confidence 999999999999999999999999999999999999996 899999999999999998777 455667778999999999
Q ss_pred CCCccccCCEEEEEeCCeEEEecChHHHHhc-CccHHHHHHHH
Q 000702 635 QVEFLPAADFILVLKEGRIIQAGKYDDLLQA-GTDFNALVSAH 676 (1343)
Q Consensus 635 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 676 (1343)
|++.+..||+|++|++|+|++.|+|+||+++ ++.|.+++...
T Consensus 1504 Rl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1504 RLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred cHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999999999999999999999999999974 77888887654
No 86
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-62 Score=620.07 Aligned_cols=200 Identities=21% Similarity=0.321 Sum_probs=168.8
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 35999999999999999999999999999999999999999999999741 269
Q ss_pred eeecCCc--cccC-CchhhhcCC-CCCCCHHHHHHHHHHcCCch-HHhcccCCCCcccccCCCCCChhHHHHHHHHHHHh
Q 000702 1175 GIIPQDP--NLFE-GTIRCNLDP-LEEHSDREIWEALDKSQLGD-IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALL 1249 (1343)
Q Consensus 1175 ~iVpQdp--~lF~-gTIr~NLdp-~~~~sd~ei~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1249 (1343)
+|+||++ .++. .|+.+++.. .....++++.+.|+..++.. .. +.++ ..||||||||++||||++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~-------~~~~----~~LSgGekqRl~La~~l~ 446 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKV-------TEET----RRFSGGEKARLVLALIVW 446 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHh-------cCch----hhCCHHHHHHHHHHHHHh
Confidence 9999985 3433 378877632 22234566788888888743 22 2333 479999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEe-eecChhHHhh
Q 000702 1250 KQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVA-EFDTPGRLLE 1320 (1343)
Q Consensus 1250 ~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv-e~g~p~eLl~ 1320 (1343)
++|++|||||||++||..+...+.+.|++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 447 ~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 447 QRPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 999999999999999999999999999875 4 599999999999876 9999999999998 6788888743
No 87
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.9e-61 Score=546.87 Aligned_cols=489 Identities=21% Similarity=0.227 Sum_probs=379.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHH
Q 000702 823 MALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTI 902 (1343)
Q Consensus 823 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~ 902 (1343)
+++.++..++-.+|+.++...+.+.-.+++...+...+++|..--...+..+.+ +|++.+..++...-...+...-
T Consensus 70 l~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaP 145 (580)
T COG4618 70 LGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAP 145 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCc
Confidence 334455677889999999999999999999999999988877644333333333 3566665554442221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHH
Q 000702 903 QLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNL 982 (1343)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~ 982 (1343)
-+-..+++++.++|++.++.+.-.++.+.+...--..+++-.+..++....-..+...+..+.++|+|.|......+++.
T Consensus 146 W~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~ 225 (580)
T COG4618 146 WMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWG 225 (580)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHH
Confidence 23344566777888887766655444444444444445555555566666677888999999999999999887777766
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 983 YLLDCFARPFFCSLAAIEWLCLRMELLSTFV-FAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENK 1061 (1343)
Q Consensus 983 ~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~-~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~ 1061 (1343)
+....+....-.....+.-++.....+=.+. ..+..+-..+...|.+++|++...-...-....++...+..|.++-..
T Consensus 226 ~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~A 305 (580)
T COG4618 226 RFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAA 305 (580)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHH
Confidence 5554444333222222222222111111111 111111223344788999887766666666778889999999999999
Q ss_pred hhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHH
Q 000702 1062 IISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLI 1141 (1343)
Q Consensus 1062 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl 1141 (1343)
..|..|+.+..+..++..... ..| ..+|.+.++++++.-++...|+|+|+||+++|||-+|||||||||||||.
T Consensus 306 r~s~~Rl~~lL~~~p~~~~~m---~LP---~P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLa 379 (580)
T COG4618 306 RQSYKRLNELLAELPAAAERM---PLP---APQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLA 379 (580)
T ss_pred HHHHHHHHHHHHhCccccCCC---CCC---CCCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHH
Confidence 999999999987544432211 111 13689999999997777777999999999999999999999999999999
Q ss_pred HHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhccc
Q 000702 1142 QALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKD 1220 (1343)
Q Consensus 1142 ~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp 1220 (1343)
++|.|...|.+|+|.+||-|+++.+.++|-++|||.|||-.||+|||.|||.-|+ +.+++.|.+|.+.++.||.|.++|
T Consensus 380 R~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP 459 (580)
T COG4618 380 RLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLP 459 (580)
T ss_pred HHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCc
Confidence 9999999999999999999999999999999999999999999999999998665 778888999999999999999999
Q ss_pred CCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccC
Q 000702 1221 QKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSD 1299 (1343)
Q Consensus 1221 ~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D 1299 (1343)
+||||.|||+|..||||||||++||||++.+|+++|||||.||||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|
T Consensus 460 ~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~D 539 (580)
T COG4618 460 QGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVD 539 (580)
T ss_pred CCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999988654 6899999999999999999
Q ss_pred EEEEEeCCEEeeecChhHHhhc
Q 000702 1300 LVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1300 rIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+|+||++|++..||+-+|.+++
T Consensus 540 kilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 540 KILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred eeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999875
No 88
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.1e-59 Score=585.94 Aligned_cols=515 Identities=15% Similarity=0.130 Sum_probs=383.4
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILK-SFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILG 204 (1343)
Q Consensus 126 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 204 (1343)
+..+++ .+|+.+++++++.++..++..+.|++++.+++...... ....+.++ ++ .++..++.....+...+.+
T Consensus 8 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~ 81 (555)
T TIGR01194 8 ILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--QGSLFSFG-GL---CLLALLFRIGADIFPAYAG 81 (555)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--chHHHHHH-HH---HHHHHHHHHHHHHHHHHHH
Confidence 444778 88999999999999999999999999998886421110 01111111 11 1222233334444557788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 205 MHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIA 284 (1343)
Q Consensus 205 ~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~ 284 (1343)
.++...++..+|+|+++++...+++.++|++++++++|++.+++++..+..++...+.++++++++++.....+++.+++
T Consensus 82 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~ 161 (555)
T TIGR01194 82 MHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISA 161 (555)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998765555555555555555555544444444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 285 TIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWED--RYRIQLEEMRGVEFRWLRKALYSQAFIT 362 (1343)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~--~~~~~i~~~r~~e~~~~~~~~~~~~~~~ 362 (1343)
+++.+.+..+..++.++..++..+..++..+.+.|.++|++++|.++.++ ...+++.+..++..+...+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (555)
T TIGR01194 162 IIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAE 241 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 44545555566667777778888888999999999999999999999853 3333333322222111111111111111
Q ss_pred HHHHHHHHH-HH-HHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---c
Q 000702 363 FIFWSSPIF-VA-AVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQ---E 437 (1343)
Q Consensus 363 ~~~~~~~~~-~~-~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~---~ 437 (1343)
.+......+ +. .+.++.+ .+.+|+|.+++++.+...+..|+..+.+.+..++++.+|++|+.++++.++.+ .
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~---~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~ 318 (555)
T TIGR01194 242 NFGQLLFFLLIGCALFAAAM---FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPEL 318 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 111111111 11 1111111 25799999999999999999999999999999999999999999998642211 0
Q ss_pred ccc--ccc---CCCCCcceEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcE
Q 000702 438 DAT--IVL---PRGMTNVAIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGE 510 (1343)
Q Consensus 438 ~~~--~~~---~~~~~~~~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~ 510 (1343)
+.. ... +.......|+++|++|+|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~ 398 (555)
T TIGR01194 319 ELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGE 398 (555)
T ss_pred cccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE
Confidence 000 000 1011124699999999996421 246999999999999999999999999999999999999999999
Q ss_pred EEECCe-------------EEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCC
Q 000702 511 VRLCGT-------------AAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINL 577 (1343)
Q Consensus 511 i~~~g~-------------i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 577 (1343)
|.++|. ++||+|+|++|++|+++|+ ..+.++++.+++++.++++++++.+|+|++|. .+|
T Consensus 399 i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~L 471 (555)
T TIGR01194 399 ILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TAL 471 (555)
T ss_pred EEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccC
Confidence 999983 7999999999999999995 23456778888999999999999999999984 789
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000702 578 SGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPAADFILVLKEGRIIQA 656 (1343)
Q Consensus 578 SgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~ 656 (1343)
|||||||++||||++++|+++|||||||+||+++++.+.+.+++.. .+++|+|+||||++.+..||+|++|++|++++.
T Consensus 472 SgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 472 STGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999998877665433 468999999999999999999999999999864
No 89
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.5e-60 Score=534.92 Aligned_cols=529 Identities=21% Similarity=0.299 Sum_probs=426.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 122 TPSLALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVD 201 (1343)
Q Consensus 122 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 201 (1343)
......+.+..++..++..++++.+-.++.+..|+.+-++-|-+-...+.+ ....+.++....++++.+++..-.+...
T Consensus 10 ~~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~-TLv~Ltvlal~ly~~~glLd~iR~~~l~ 88 (580)
T COG4618 10 PKNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP-TLVMLTVLALGLYAFQGLLDAIRSRVLV 88 (580)
T ss_pred CCchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567778888888999999999999999999999988888775443322 2344455555667777788877778889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 202 ILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWY-----LHDIWMLPLQIILALAILYKNVGI 276 (1343)
Q Consensus 202 ~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-----~~~~~~~~~~i~~~~~~l~~~~g~ 276 (1343)
|++.++...|...+|.-+.+.+..........+.+ .|.+.+..|... +.+..-.|+-+.+ ++++.-.+|+
T Consensus 89 Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~ 163 (580)
T COG4618 89 RIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGL 163 (580)
T ss_pred HHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999976655443222233333 488888887531 2222234553333 4555566787
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 277 ASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALY 356 (1343)
Q Consensus 277 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~ 356 (1343)
.+++|.++++.+..++- +..++-.++-.+..-++.....-..+|.++|+.+|+.+...+++.+....-++......-
T Consensus 164 ~a~~ga~iLv~la~ln~---~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd 240 (580)
T COG4618 164 IALAGAIILVVLALLNE---RATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASD 240 (580)
T ss_pred HHHHHHHHHHHHHHHHH---HHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 77777766655554444 444556667778888899999999999999999999999999998887776666555443
Q ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000702 357 SQAFITF----IFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQE 432 (1343)
Q Consensus 357 ~~~~~~~----~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~ 432 (1343)
....... +-... -..++..|+|+++.+++|+|.+++...+.+....|+......+.++..|+.|++|++++|..
T Consensus 241 ~~~~~~~~Sr~~Rm~l--Qs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~ 318 (580)
T COG4618 241 RNGAFGALSRALRMAL--QSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAE 318 (580)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3322221 11222 23456789999999999999999999999999999999999999999999999999999976
Q ss_pred cccccccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEE
Q 000702 433 EELQEDATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVR 512 (1343)
Q Consensus 433 ~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~ 512 (1343)
....... ...| .....+.++++++. +++.++|+++||||++.+||-++|+||||||||||.++|.|.++|++|.|+
T Consensus 319 ~p~~~~~-m~LP--~P~g~L~Ve~l~~~-PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VR 394 (580)
T COG4618 319 LPAAAER-MPLP--APQGALSVERLTAA-PPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVR 394 (580)
T ss_pred CccccCC-CCCC--CCCceeeEeeeeec-CCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEE
Confidence 5433221 2233 33457999999996 667778999999999999999999999999999999999999999999999
Q ss_pred ECC-------------eEEEEcccccccCccHHHHhc-cCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCC
Q 000702 513 LCG-------------TAAYVSQSAWIQSGNIEENIL-FGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLS 578 (1343)
Q Consensus 513 ~~g-------------~i~~v~Q~~~l~~~ti~~Ni~-~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 578 (1343)
+|| +|||.||+..+|.|||+|||+ |+.+.|++++-++.++++.++-+-.+|+||+|.||+.|.+||
T Consensus 395 LDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LS 474 (580)
T COG4618 395 LDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLS 474 (580)
T ss_pred ecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCC
Confidence 998 599999999999999999996 777888888888888888999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000702 579 GGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 579 gGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 658 (1343)
|||||||+||||+|.+|.+++||||-|+||.+-+..+.+.+..-..+|.|+|+||||++.+..+|+|.+|+||++...|+
T Consensus 475 gGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~ 554 (580)
T COG4618 475 GGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGP 554 (580)
T ss_pred chHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCC
Confidence 99999999999999999999999999999999988887665555567999999999999999999999999999999999
Q ss_pred hHHHHhc
Q 000702 659 YDDLLQA 665 (1343)
Q Consensus 659 ~~~l~~~ 665 (1343)
-+|++++
T Consensus 555 r~eVLa~ 561 (580)
T COG4618 555 REEVLAK 561 (580)
T ss_pred HHHHHHH
Confidence 9998753
No 90
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.9e-61 Score=608.77 Aligned_cols=200 Identities=22% Similarity=0.352 Sum_probs=166.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999 4332 599
Q ss_pred eecCCc-cccCC-chhhhcCCCC-CC--C--HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1176 IIPQDP-NLFEG-TIRCNLDPLE-EH--S--DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1176 iVpQdp-~lF~g-TIr~NLdp~~-~~--s--d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
|+||++ .++.. |+++|+.... .. . +.++.+.|+..++... ..+.++ ..||||||||++||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPK------RAMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHH------HHhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46654 9999996421 11 1 4456777777776421 123333 46999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe-CCEEeee-cChhHHhh
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS-DGRVAEF-DTPGRLLE 1320 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~-~G~ive~-g~p~eLl~ 1320 (1343)
+.+|++|||||||++||..+...+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|++.++ |++.+-++
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999875 5699999999998865 99999998 8999886 56766643
No 91
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=5.9e-60 Score=570.03 Aligned_cols=485 Identities=26% Similarity=0.380 Sum_probs=346.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--eEEEEcccccccC
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--TAAYVSQSAWIQS 528 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--~i~~v~Q~~~l~~ 528 (1343)
.|.++|++++|. ++++|+|+||++.+|++++|||+|||||||||++|+|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 588999999983 57899999999999999999999999999999999999999999999987 6999999998875
Q ss_pred -ccHHHHhccCCCCC---HHHHHHHHHH---------------------hhhhhhHhhccC--CCccccCCCCCCCChHH
Q 000702 529 -GNIEENILFGSPMD---KAKYKKVIHA---------------------CSLKKDLELFSH--GDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 529 -~ti~~Ni~~g~~~~---~~~~~~~~~~---------------------~~l~~~~~~l~~--g~~t~ig~~g~~LSgGQ 581 (1343)
.||+|.+..|...- ..+++++... ..++..++..-. |.... .....+|||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LSGG~ 158 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLSGGW 158 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcCHHH
Confidence 59999998875310 1111211110 011112222111 22222 45667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeE-EEecCh
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRI-IQAGKY 659 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i-~~~g~~ 659 (1343)
|.||+|||||..+||+|||||||++||.++..++ ++.+.. .+| |+|+|||+.+||+. |++|+.+++|++ .+.|+|
T Consensus 159 r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WL-e~~L~~-~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 159 RRRVALARALLEEPDLLLLDEPTNHLDLESIEWL-EDYLKR-YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHH-HHHHHh-CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 9999999999999999999999999999986665 666554 356 99999999999987 999999999988 588999
Q ss_pred HHHHhcCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHH
Q 000702 660 DDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKK 739 (1343)
Q Consensus 660 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (1343)
+.+++......+. .....+
T Consensus 236 ~~~~~~r~~~~~~-----------------------------------------------------------~~~~~~-- 254 (530)
T COG0488 236 SSYLEQKAERLRQ-----------------------------------------------------------EAAAYE-- 254 (530)
T ss_pred HHHHHHHHHHHHH-----------------------------------------------------------HHHHHH--
Confidence 9876532110000 000000
Q ss_pred HHhhhhhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHH
Q 000702 740 KAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLL 819 (1343)
Q Consensus 740 ~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 819 (1343)
+ ..+.....++ ++.... .
T Consensus 255 -~---~~~~~~~~~~-------------~i~r~~------------------------------~--------------- 272 (530)
T COG0488 255 -K---QQKELAKEQE-------------WIRRGK------------------------------A--------------- 272 (530)
T ss_pred -H---HHHHHHHHHH-------------HHHHHH------------------------------h---------------
Confidence 0 0000000000 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHH
Q 000702 820 VVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFAS 899 (1343)
Q Consensus 820 ~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~ 899 (1343)
T Consensus 273 -------------------------------------------------------------------------------- 272 (530)
T COG0488 273 -------------------------------------------------------------------------------- 272 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHH
Q 000702 900 TTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMK 979 (1343)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~ 979 (1343)
...+++
T Consensus 273 ------------------------------------~~~~~k-------------------------------------- 278 (530)
T COG0488 273 ------------------------------------AASKAK-------------------------------------- 278 (530)
T ss_pred ------------------------------------ccchHH--------------------------------------
Confidence 000000
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 980 RNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLE 1059 (1343)
Q Consensus 980 ~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e 1059 (1343)
..+
T Consensus 279 -----------------------------------------------------------------------------~a~ 281 (530)
T COG0488 279 -----------------------------------------------------------------------------KAK 281 (530)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 000
Q ss_pred HHhhhHHHHHHh--hcCCCCCCCCC-CCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCC
Q 000702 1060 NKIISIERIYQY--SQIPGEAPPVI-EDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSG 1136 (1343)
Q Consensus 1060 ~~~~s~eRi~~~--~~~~~e~~~~~-~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsG 1136 (1343)
..+...+++.+- ...|....... ....++..-..+-.++++|+++.|+++ .++++++||.|++|+|||||||||+|
T Consensus 282 sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~G 360 (530)
T COG0488 282 SRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAG 360 (530)
T ss_pred HHHHHHHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCC
Confidence 001111121110 00011100000 001111111234469999999999765 57999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCc-cccC-CchhhhcCCCC-CCCHHHHHHHHHHcCCc
Q 000702 1137 KSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDP-NLFE-GTIRCNLDPLE-EHSDREIWEALDKSQLG 1213 (1343)
Q Consensus 1137 KSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp-~lF~-gTIr~NLdp~~-~~sd~ei~~aL~~~~L~ 1213 (1343)
||||+++|.|-..|.+|+|.++- .-++||.+|+. .++. .|+-+++.... +..+.++...|.+.++.
T Consensus 361 KSTLlk~l~g~~~~~~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~ 429 (530)
T COG0488 361 KSTLLKLLAGELGPLSGTVKVGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFT 429 (530)
T ss_pred HHHHHHHHhhhcccCCceEEeCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCC
Confidence 99999999999999999998864 13599999998 4443 38888886433 44478899999999886
Q ss_pred hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcc
Q 000702 1214 DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIP 1293 (1343)
Q Consensus 1214 ~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ 1293 (1343)
.-- ..++| ..||||||-|+.||+.++.+|++|||||||.+||.+|-..+.++|.+ |+| |||+|||+..
T Consensus 430 ~~~------~~~~v----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~-f~G-tvl~VSHDr~ 497 (530)
T COG0488 430 GED------QEKPV----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD-FEG-TVLLVSHDRY 497 (530)
T ss_pred hHH------HhCch----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh-CCC-eEEEEeCCHH
Confidence 432 23445 47999999999999999999999999999999999999999999985 544 9999999999
Q ss_pred cccc-cCEEEEEeCCEEeee-cChhHHhhc
Q 000702 1294 TVID-SDLVLVLSDGRVAEF-DTPGRLLED 1321 (1343)
Q Consensus 1294 ti~~-~DrIlvl~~G~ive~-g~p~eLl~~ 1321 (1343)
.+.. |++|+++++ ++.++ |.+++..+.
T Consensus 498 Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 498 FLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred HHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 9977 999999999 88888 788887754
No 92
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.6e-58 Score=620.72 Aligned_cols=470 Identities=21% Similarity=0.228 Sum_probs=365.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 200 VDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIAS 278 (1343)
Q Consensus 200 ~~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~ 278 (1343)
..+.+.+.-..+...+|+++++.+..++++.++|+++|+++.|++.+++.+. .+..+....+.+++.+++++...++.+
T Consensus 949 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~ 1028 (1490)
T TIGR01271 949 LVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF 1028 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777888899999999999999999999999999999999999988654 455555566666666655555444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHH----H
Q 000702 279 VATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRK----A 354 (1343)
Q Consensus 279 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~----~ 354 (1343)
++.+.++++++.+..++.+..++.++.....++...+.+.|.++|+.+||.|++|+.|.++..+.-+...+.... .
T Consensus 1029 l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1490)
T TIGR01271 1029 IAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTL 1108 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333344445555555666666677778888999999999999999999999988877655432221111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000702 355 LYSQAFITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEE 434 (1343)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e 434 (1343)
.+......++ ...++.++.+ ..+.....++|.+..+++++..+..++..+...+..+..+.+|++|+.+|++.++
T Consensus 1109 ~wl~~~~~~i---~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~ 1183 (1490)
T TIGR01271 1109 RWFQMRIDII---FVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQ 1183 (1490)
T ss_pred HHHHHHHHHH---HHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1111111111 1011111111 1111123455666666667777888888888889999999999999999997654
Q ss_pred ccccccc----------------ccC-CCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHH
Q 000702 435 LQEDATI----------------VLP-RGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLL 497 (1343)
Q Consensus 435 ~~~~~~~----------------~~~-~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl 497 (1343)
+...... ..+ .-+..+.|+|+|++|+|++ +.+++|+|+||+|++||++||||+||||||||+
T Consensus 1184 e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~-~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl 1262 (1490)
T TIGR01271 1184 EEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTE-AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLL 1262 (1490)
T ss_pred ccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCC-CCcceeeccEEEEcCCCEEEEECCCCCCHHHHH
Confidence 4221100 000 0112357999999999965 346899999999999999999999999999999
Q ss_pred HHHhcCccCCCcEEEECC-------------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccC
Q 000702 498 SCILGEIPKISGEVRLCG-------------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSH 564 (1343)
Q Consensus 498 ~~l~g~~~~~~G~i~~~g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~ 564 (1343)
++|+|+++ .+|+|.++| +++||||+|.+|+|||||||....++++++..++++.|++.+.+..+|+
T Consensus 1263 ~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~ 1341 (1490)
T TIGR01271 1263 SALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPD 1341 (1490)
T ss_pred HHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcc
Confidence 99999997 799999998 3899999999999999999987777889999999999999999999999
Q ss_pred CCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCE
Q 000702 565 GDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADF 644 (1343)
Q Consensus 565 g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~ 644 (1343)
|++|.|||+|.+||||||||++|||||+++|+|+|||||||+||+++++.|.+ .++...+++|+|+||||++.+..||+
T Consensus 1342 GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~-~L~~~~~~~TvI~IaHRl~ti~~~Dr 1420 (1490)
T TIGR01271 1342 KLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRK-TLKQSFSNCTVILSEHRVEALLECQQ 1420 (1490)
T ss_pred ccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999887754 56667789999999999999999999
Q ss_pred EEEEeCCeEEEecChHHHHhcCccHHHHHHHHH
Q 000702 645 ILVLKEGRIIQAGKYDDLLQAGTDFNALVSAHH 677 (1343)
Q Consensus 645 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 677 (1343)
|++|++|+|++.|+|++|++.++.|.++++...
T Consensus 1421 IlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1421 FLVIEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 999999999999999999987788888876544
No 93
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.2e-58 Score=614.78 Aligned_cols=212 Identities=22% Similarity=0.263 Sum_probs=177.8
Q ss_pred eEEEEEEEEEEcC-----------CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CcceEEEcCeec
Q 000702 1096 TIELIDLKVRYGE-----------NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP--ACGRIIIDNIDI 1162 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~-----------~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~--~~G~I~IdG~di 1162 (1343)
.+.|+||++..+. +...+|+|||++|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998742 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHHHhhcceeecCCccccC-CchhhhcCCC------CCCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCC
Q 000702 1163 STIGLHDLRSRLGIIPQDPNLFE-GTIRCNLDPL------EEHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENG 1231 (1343)
Q Consensus 1163 ~~i~l~~LR~~i~iVpQdp~lF~-gTIr~NLdp~------~~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1231 (1343)
++ ..+|+.++||+|++.++. .|++|||... ...+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 43 456788999999998876 4999999531 122333 36778888888654 356666443
Q ss_pred -CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccc-c-cccCEEEEEeC-
Q 000702 1232 -DNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPT-V-IDSDLVLVLSD- 1306 (1343)
Q Consensus 1232 -~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrIlvl~~- 1306 (1343)
..||||||||++|||||+.+|+||+||||||+||..+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999864 47899999999984 4 56999999996
Q ss_pred CEEeeecChhH
Q 000702 1307 GRVAEFDTPGR 1317 (1343)
Q Consensus 1307 G~ive~g~p~e 1317 (1343)
|+++.+|++.+
T Consensus 1097 G~~v~~G~~~~ 1107 (1470)
T PLN03140 1097 GQVIYSGPLGR 1107 (1470)
T ss_pred CEEEEECCccc
Confidence 89999998753
No 94
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.5e-60 Score=597.16 Aligned_cols=200 Identities=20% Similarity=0.267 Sum_probs=166.4
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
...|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.+
T Consensus 506 ~~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 506 PPIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred CceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 3469999999999643 3599999999999999999999999999999999999999999999876 347
Q ss_pred ceeecCCccccCCchhhhcC-----CCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1174 LGIIPQDPNLFEGTIRCNLD-----PLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1174 i~iVpQdp~lF~gTIr~NLd-----p~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
|+|+||++. ...++.+|.. .+...+++++.++|+..++.+... +.+ ...||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~------~~~----~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA------LQP----MYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh------cCC----ccccCHHHHHHHHHHHHH
Confidence 999999973 2224444421 122345778889999999864221 122 257999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEe-eecChhHH
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVA-EFDTPGRL 1318 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv-e~g~p~eL 1318 (1343)
+++|++|||||||++||..+...+.+.|++. + .|||+|||+++.+.. ||||++|++|+++ ..|++++.
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999999999999999999864 4 499999999999876 9999999999998 56777664
No 95
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.9e-56 Score=559.36 Aligned_cols=513 Identities=17% Similarity=0.141 Sum_probs=370.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 125 LALAILKSFWKEAALNAVFAGLNTIVSYVG-PYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDIL 203 (1343)
Q Consensus 125 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 203 (1343)
+++.+++.+++.++...++.++..++.++. |++.+.++|.+... ....+.+++++++..+ +.....+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS---LLVLPEFLGLLLLLMA----VTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 567888999999999999999999988874 77888888865321 1111111111211111 222333445667
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 204 GMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLI 283 (1343)
Q Consensus 204 ~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~ 283 (1343)
+.++...++..+|+|+++++...+++.++|++++++++|++.+..++..+..++...+.+++++++++...+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 88888899999999999999999999999999999999999998765556667777777777777766655555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 284 ATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQA--WEDRYRIQLEEMRGVEFRWLRKALYSQAFI 361 (1343)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~--~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~ 361 (1343)
++++.+.+..++.++.++..++.++..+++.+.+.|.++|++++++.+ .++.+.+++++..++-.+...+........
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 666666677788888888888999999999999999999999997432 223444444433222111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC---CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 000702 362 TFIFWSSPIFVAAVTFGTSILLGA---QLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQED 438 (1343)
Q Consensus 362 ~~~~~~~~~~~~~~~f~~~~~~~~---~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~ 438 (1343)
....... ..+.++.+.+.++ ..+.+.+.++..+...+..|+..+...+..++++.++.+|+.++++.++..+.
T Consensus 236 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~ 311 (547)
T PRK10522 236 VNWSNIM----MLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF 311 (547)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 1111011 1111222222211 12223333333333346789999999999999999999999999865432211
Q ss_pred cccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---
Q 000702 439 ATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--- 515 (1343)
Q Consensus 439 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--- 515 (1343)
.. ..+ ......++++|++|+|+. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 312 ~~-~~~-~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 387 (547)
T PRK10522 312 PR-PQA-FPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (547)
T ss_pred cc-ccc-cCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEC
Confidence 11 111 111236999999999963 35799999999999999999999999999999999999999999999987
Q ss_pred ----------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 ----------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 ----------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++||+|+|++|++|++|| +...++++.+++++.+++..++.. ++|. .+|.+||||||||+
T Consensus 388 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qRl 458 (547)
T PRK10522 388 TAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKRL 458 (547)
T ss_pred CCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHHH
Confidence 3899999999999999999 445666777777777776655542 3321 24889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccccCCEEEEEeCCeEEEe-cChHH
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLPAADFILVLKEGRIIQA-GKYDD 661 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~-g~~~~ 661 (1343)
+||||++++|+++|||||||+||+++++.+.+.+.+... +++|+|+||||++.+..||+|++|++|++++. |+..+
T Consensus 459 ~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~ 536 (547)
T PRK10522 459 ALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERD 536 (547)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCchh
Confidence 999999999999999999999999998888765443322 48999999999999999999999999999875 44433
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.3e-59 Score=577.04 Aligned_cols=191 Identities=25% Similarity=0.352 Sum_probs=163.6
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.++++|++++|++ ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred eecCCccc-cCCchhhhcCCC-CCC-CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1176 IIPQDPNL-FEGTIRCNLDPL-EEH-SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1176 iVpQdp~l-F~gTIr~NLdp~-~~~-sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
|+||++.+ ++.|+++|+... ..+ ....+.++++..++.+... .++ .+||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~-------~~~----~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLD-------KNV----KDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHh-------CCc----ccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 456999999642 122 2335677888888865443 333 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecC
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~ 1314 (1343)
+||||||||++||.++...+.+.|++..+ ++|+|+|+|+++.+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998643 7899999999998865 999999975 8877765
No 97
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.2e-57 Score=572.19 Aligned_cols=511 Identities=14% Similarity=0.113 Sum_probs=403.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCCh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 778 IPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNP----MVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFV 853 (1343)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 853 (1343)
+.+.+++.++..++.+..+++.+...+.....+. ... ..++.+++++.++..+..++...+......+..+.+|+
T Consensus 98 l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 98 LILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566777788888888765543211110 011 11222233333444455555556666667777888888
Q ss_pred HHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000702 854 KMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTM-VTWQVLLLVIPMAVACLWM 932 (1343)
Q Consensus 854 ~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ip~~~~~~~~ 932 (1343)
+.+++....++.|||+ ++|++++|+++|++.+...+...+..++..++.+++.++.++. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888888889999997 8999999999999999999999999999999999888877775 8888888877778888888
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000702 933 QKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTF 1012 (1343)
Q Consensus 933 ~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1012 (1343)
.+++.+..+++.+......+.+.+.+.|.++|+++||+|+.++.+.+++.+..+...+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999988888887777777777777776666432
Q ss_pred H-HHH---HHHHHHHhc----CCCCCHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCCCCC-
Q 000702 1013 V-FAF---CMVLLVSFP----HGAIDPSMA-GLAVTY---GLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAP- 1079 (1343)
Q Consensus 1013 ~-~~~---~~~~~~~~~----~g~~~~~~~-gl~l~~---~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~- 1079 (1343)
. ..+ .+...+... .|.++.|.. +.+++| ..++..++..+...+.++.....+.+|+.++.+.+++..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 111 111112221 267777753 334444 556788899999999999999999999999986433211
Q ss_pred -----CCCCCCC--------C------CCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHH
Q 000702 1080 -----PVIEDSR--------P------PSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTL 1140 (1343)
Q Consensus 1080 -----~~~~~~~--------~------~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTL 1140 (1343)
...+... . .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0000000 0 0000134679999999999643 369999999999999999999999999999
Q ss_pred HHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCC--------CCCCHHHHHHHHHHcCC
Q 000702 1141 IQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL--------EEHSDREIWEALDKSQL 1212 (1343)
Q Consensus 1141 l~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~--------~~~sd~ei~~aL~~~~L 1212 (1343)
+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+++|+... .+.++++++++++.+++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999742 23578899999999999
Q ss_pred chHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCc
Q 000702 1213 GDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRI 1292 (1343)
Q Consensus 1213 ~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl 1292 (1343)
.+++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 999877 999999986 46799999999999999999999999999999999999999999999874 89999999999
Q ss_pred ccccccCEEEEEeC
Q 000702 1293 PTVIDSDLVLVLSD 1306 (1343)
Q Consensus 1293 ~ti~~~DrIlvl~~ 1306 (1343)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 98
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-57 Score=533.08 Aligned_cols=443 Identities=24% Similarity=0.360 Sum_probs=335.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|++.+|+ +.++|+|+||++.+||++|++|+||+|||||+|.|.|.|+|++|+|.++|.
T Consensus 8 ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 588999999985 468999999999999999999999999999999999999999999999994
Q ss_pred EEEEcccccc-cCccHHHHhccCCCCC-------HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 517 AAYVSQSAWI-QSGNIEENILFGSPMD-------KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 517 i~~v~Q~~~l-~~~ti~~Ni~~g~~~~-------~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
|+.|.|+.-+ .+-||.|||.+|++.. ..+.++.. ..+ ++.+. ..........+||+||||-|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A--~~~---l~~lg--~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA--REL---LARLG--LDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH--HHH---HHHcC--CCCChhhhhhhCCHHHHHHHHHH
Confidence 7999999775 5789999999997632 22222211 111 12111 11114456677999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecCh-HHHHhcC
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKY-DDLLQAG 666 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~-~~l~~~~ 666 (1343)
||+..+++|+|||||||+|+.+..+++|+...+...+|.++|+|||+++.+.. ||+|.||+||+.+..++. .++-
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~--- 234 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETS--- 234 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCC---
Confidence 99999999999999999999999999997654555579999999999998765 999999999999865431 1100
Q ss_pred ccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhhhh
Q 000702 667 TDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRSRK 746 (1343)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (1343)
.+.
T Consensus 235 -----------------------------------------------------------------~~~------------ 237 (500)
T COG1129 235 -----------------------------------------------------------------EDE------------ 237 (500)
T ss_pred -----------------------------------------------------------------HHH------------
Confidence 000
Q ss_pred hhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHHHH
Q 000702 747 KQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALA 826 (1343)
Q Consensus 747 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~ 826 (1343)
+. +.+
T Consensus 238 --lv-------------------~~M------------------------------------------------------ 242 (500)
T COG1129 238 --LV-------------------RLM------------------------------------------------------ 242 (500)
T ss_pred --HH-------------------HHh------------------------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHHHH
Q 000702 827 FGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVG 906 (1343)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~ 906 (1343)
+|+
T Consensus 243 ---------------------------------------------vGr-------------------------------- 245 (500)
T COG1129 243 ---------------------------------------------VGR-------------------------------- 245 (500)
T ss_pred ---------------------------------------------hCc--------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHHHH
Q 000702 907 IIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLD 986 (1343)
Q Consensus 907 ~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d 986 (1343)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Q 000702 987 CFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIE 1066 (1343)
Q Consensus 987 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~e 1066 (1343)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhc
Q 000702 1067 RIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFR 1146 (1343)
Q Consensus 1067 Ri~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~r 1146 (1343)
+..+.-++.+ ++ -+..-.++++|++.. ..++|+||++++||++||.|-=|||+|-++++|+|
T Consensus 246 ---~~~~~~~~~~-------~~--~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG 307 (500)
T COG1129 246 ---ELEDLFPEPP-------EE--GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFG 307 (500)
T ss_pred ---chhhhccccc-------cc--CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhC
Confidence 0000000000 00 011224678887753 15899999999999999999999999999999999
Q ss_pred ccCCCcceEEEcCeecCCCChH-HHhhcceeecCCcc----ccCCchhhhcCCC--CCCCHH-HHHHHHHHcCCchHHhc
Q 000702 1147 LIEPACGRIIIDNIDISTIGLH-DLRSRLGIIPQDPN----LFEGTIRCNLDPL--EEHSDR-EIWEALDKSQLGDIVRG 1218 (1343)
Q Consensus 1147 l~~~~~G~I~IdG~di~~i~l~-~LR~~i~iVpQdp~----lF~gTIr~NLdp~--~~~sd~-ei~~aL~~~~L~~~i~~ 1218 (1343)
.-++.+|+|.+||.++.--++. ..+..|+|||-|.- +...+|++|+... ..++.. -+...-++.-..+++.+
T Consensus 308 ~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~ 387 (500)
T COG1129 308 ARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRR 387 (500)
T ss_pred CCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHh
Confidence 9999999999999988777665 58899999998874 4456999999632 111100 12222223333344444
Q ss_pred c---cCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccc
Q 000702 1219 K---DQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPT 1294 (1343)
Q Consensus 1219 l---p~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t 1294 (1343)
+ ..+.+.++ .+||||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.+..
T Consensus 388 l~Ik~~s~~~~v----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpE 463 (500)
T COG1129 388 LRIKTPSPEQPI----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPE 463 (500)
T ss_pred cCcccCCccchh----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHH
Confidence 3 23455666 4799999999999999999999999999999999999999999999865 57999999999999
Q ss_pred cc-ccCEEEEEeCCEEeeecChhH
Q 000702 1295 VI-DSDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1295 i~-~~DrIlvl~~G~ive~g~p~e 1317 (1343)
+. .||||+||.+|+++..=+.++
T Consensus 464 ll~~~DRIlVm~~Gri~~e~~~~~ 487 (500)
T COG1129 464 LLGLSDRILVMREGRIVGELDREE 487 (500)
T ss_pred HHhhCCEEEEEECCEEEEEecccc
Confidence 87 599999999999987544433
No 99
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.3e-57 Score=499.28 Aligned_cols=466 Identities=24% Similarity=0.337 Sum_probs=372.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000702 203 LGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWY-LHDIWMLPLQIILALAILYKNVGIA-SVA 280 (1343)
Q Consensus 203 ~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~~~~i~~~~~~l~~~~g~~-~l~ 280 (1343)
.+......+....|.|+++|+..+..+..+|.+.--+....+-++.+..+ +..+....+++.+..+++++..|+. +.+
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 34444556777899999999999888888887766665555556555443 3455556678888888888887754 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHH----HHHHHHHHHH
Q 000702 281 TLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGV----EFRWLRKALY 356 (1343)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~----e~~~~~~~~~ 356 (1343)
.++.+++++.+...........+++..++-.+-...-.++|-+..++|.|+-|+.+..+..+..+. +.+......+
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555566666666666677889999999999999998777666554433 3332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 000702 357 SQAFITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQ 436 (1343)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~ 436 (1343)
+......++. ..+....+.+...+..+.+|.|.+...-++...+..|++.+......+.+++.-.+++.+.+..+...
T Consensus 169 Ln~gQ~~I~~--~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v 246 (497)
T COG5265 169 LNFGQTAIFS--TGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEV 246 (497)
T ss_pred HHHhhHHHHH--HHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhh
Confidence 2222122211 11222334455556678999999999999999999999999999999999999999999999876544
Q ss_pred cccccccCCC-CCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC
Q 000702 437 EDATIVLPRG-MTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG 515 (1343)
Q Consensus 437 ~~~~~~~~~~-~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g 515 (1343)
.+.....+-. ...+.+.|+|++|.|.+ .+|+|+++||++++|+.++|||++|+||||++++|.++|++++|.|.++|
T Consensus 247 ~d~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~ 324 (497)
T COG5265 247 SDAPDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDG 324 (497)
T ss_pred ccCCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcc
Confidence 3322111111 22346999999999864 57999999999999999999999999999999999999999999999999
Q ss_pred e-------------EEEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 T-------------AAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ~-------------i~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
+ ||.|||+..|||+|+..||.+|.| ..+++...+.+++++++.++.+|+|++|.|||+|-.||||+
T Consensus 325 qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSgge 404 (497)
T COG5265 325 QDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGE 404 (497)
T ss_pred hhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCch
Confidence 4 899999999999999999999988 46778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
|||||+||+++++|+|++|||+|||||.+|++.| +..++...+|+|.++|+||++++-.||.|+||+||+|+|.|+|+|
T Consensus 405 kqrvaiar~ilk~p~il~~deatsaldt~te~~i-q~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ 483 (497)
T COG5265 405 KQRVAIARTILKNPPILILDEATSALDTHTEQAI-QAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEE 483 (497)
T ss_pred HHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHH-HHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHH
Confidence 9999999999999999999999999999998887 455777789999999999999999999999999999999999999
Q ss_pred HHhcCccHHHHH
Q 000702 662 LLQAGTDFNALV 673 (1343)
Q Consensus 662 l~~~~~~~~~~~ 673 (1343)
|++.++.|.+++
T Consensus 484 ll~~~g~ya~mw 495 (497)
T COG5265 484 LLAAGGLYAEMW 495 (497)
T ss_pred HHHcCChHHHHh
Confidence 999999998876
No 100
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-54 Score=553.59 Aligned_cols=469 Identities=20% Similarity=0.244 Sum_probs=367.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 200 VDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIAS 278 (1343)
Q Consensus 200 ~~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~~~ 278 (1343)
....+.+.-..|-..++++.++-+.++++.+++|.|+|+++.|++.+++... .+..+....++++..++++-....+..
T Consensus 882 ~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fl 961 (1381)
T KOG0054|consen 882 FAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFL 961 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHH
Confidence 3456777778888999999999999999999999999999999999987655 445555555666655555554444544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 279 VATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQ 358 (1343)
Q Consensus 279 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~ 358 (1343)
++.+.+.++++.+..++.+..+...+--...+.=-.+.++|.++|+-+|+.|+.|++|.++..+.-+.-.+.. ....
T Consensus 962 i~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~---f~~~ 1038 (1381)
T KOG0054|consen 962 IAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAF---FLSI 1038 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHH---HHHH
Confidence 4444444444444444444444444433344444567899999999999999999999988776544332211 1111
Q ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 000702 359 AFITFIF----WSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEE 434 (1343)
Q Consensus 359 ~~~~~~~----~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e 434 (1343)
+.+..+. ....+++.++++.+.....+..++|.+=-++++.-.+..-+..+......+-.-.+|.+|+.+|.+.|+
T Consensus 1039 ~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~ 1118 (1381)
T KOG0054|consen 1039 SANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPS 1118 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCC
Confidence 1111111 111112222222222222222778999889999888999999999999999999999999999999665
Q ss_pred cccccc-cc--cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEE
Q 000702 435 LQEDAT-IV--LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEV 511 (1343)
Q Consensus 435 ~~~~~~-~~--~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i 511 (1343)
+.+... .. .+.-+.++.|+|+|++.+|.++ ..++||||||+|+|||+++|||++|||||||+++|-+..+|.+|+|
T Consensus 1119 E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I 1197 (1381)
T KOG0054|consen 1119 EAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEI 1197 (1381)
T ss_pred CCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeE
Confidence 421111 11 1112356789999999998764 4689999999999999999999999999999999999999999999
Q ss_pred EECC-------------eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCC
Q 000702 512 RLCG-------------TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLS 578 (1343)
Q Consensus 512 ~~~g-------------~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LS 578 (1343)
.+|| +++.+||||.+|+||||.|+==-.++++++++++++.|+|.+.++.+|.|+++.|.|+|.|+|
T Consensus 1198 ~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~S 1277 (1381)
T KOG0054|consen 1198 LIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFS 1277 (1381)
T ss_pred EEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCC
Confidence 9998 479999999999999999996555678999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000702 579 GGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 579 gGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 658 (1343)
-||||-+||||||+++++|++|||+|+++|++| ..++++.++...+++|||.|+||++++-++|||+|||+|+|+|.|+
T Consensus 1278 vGQRQLlCLARALLr~skILvLDEATAsVD~~T-D~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~Efds 1356 (1381)
T KOG0054|consen 1278 VGQRQLLCLARALLRKSKILVLDEATASVDPET-DALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDS 1356 (1381)
T ss_pred hHHHHHHHHHHHHhccCCEEEEecccccCChHH-HHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCC
Confidence 999999999999999999999999999999999 6677888999899999999999999999999999999999999999
Q ss_pred hHHHHhcCc-cHHHHH
Q 000702 659 YDDLLQAGT-DFNALV 673 (1343)
Q Consensus 659 ~~~l~~~~~-~~~~~~ 673 (1343)
|++|+++++ .|..+.
T Consensus 1357 P~~Ll~~~~S~f~~~l 1372 (1381)
T KOG0054|consen 1357 PAELLSDKDSLFSSLL 1372 (1381)
T ss_pred hHHHHhCCcchHHHHH
Confidence 999997744 443343
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.8e-54 Score=544.26 Aligned_cols=517 Identities=15% Similarity=0.088 Sum_probs=377.6
Q ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-c-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWK-----EAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETF-P-HEGYILAGIFFSAKLVETITTRQWYL 198 (1343)
Q Consensus 126 ~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~~ 198 (1343)
++.++++||+ .++...++.++.+++....|++.+.++|.+.+.+.. . ...+.+++++++..++.++..+...+
T Consensus 82 l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~ 161 (659)
T TIGR00954 82 LLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKE 161 (659)
T ss_pred HHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556655 577788888889999999999999999987643311 0 01122233333333444433333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000702 199 GVDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGI- 276 (1343)
Q Consensus 199 ~~~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~~l~~~~g~- 276 (1343)
...++..++...++...|+|....+..++++ ++|++++++++|++.+.+.+. .+..+...++.++.+++.++..+++
T Consensus 162 ~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~ 240 (659)
T TIGR00954 162 LKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSV 240 (659)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 2333344444444444444444444444444 689999999999999987654 5666777777777777777764554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 277 ASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALY 356 (1343)
Q Consensus 277 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~ 356 (1343)
.+++.++.+++...+..++.+++.+..++..+..++..+...|.++|+++||.|+.|+...+++++.-++..+...+...
T Consensus 241 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~ 320 (659)
T TIGR00954 241 GPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIK 320 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666677778889999999999999999999999999999999999999998888777665554444444433
Q ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHh-C----CCcCHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 357 SQAFITFIFWSS----PIFVAAVTFGTSILL-G----AQLTAGSVLS-AM---ATFRILQEPLRNFPDLVSMMAQTKVSL 423 (1343)
Q Consensus 357 ~~~~~~~~~~~~----~~~~~~~~f~~~~~~-~----~~lt~~~~f~-~l---~l~~~l~~pl~~l~~~~~~~~~a~~s~ 423 (1343)
..+....+.... ...+..+..+..++. . +.+|.|..++ ++ .++..+..|+..+.+.+..++++.++.
T Consensus 321 ~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~ 400 (659)
T TIGR00954 321 FRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFT 400 (659)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333322221111 112222222332332 2 6788887554 33 346677999999999999999999999
Q ss_pred HHHHHhhcccccccc------cccc-----------------cCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCC
Q 000702 424 DRISGFLQEEELQED------ATIV-----------------LPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRG 480 (1343)
Q Consensus 424 ~Ri~~fl~~~e~~~~------~~~~-----------------~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G 480 (1343)
+|+.++++.++.... .... .........++++|++|.|+. ++++|+|+||++++|
T Consensus 401 ~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~G 478 (659)
T TIGR00954 401 ARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSG 478 (659)
T ss_pred HHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCC
Confidence 999999975432110 0000 000012236999999998753 357999999999999
Q ss_pred eEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--eEEEEcccccccCccHHHHhccCC--------CCCHHHHHHHH
Q 000702 481 MRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--TAAYVSQSAWIQSGNIEENILFGS--------PMDKAKYKKVI 550 (1343)
Q Consensus 481 ~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--~i~~v~Q~~~l~~~ti~~Ni~~g~--------~~~~~~~~~~~ 550 (1343)
|+++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|+++++|++|||.++. ..++++.++++
T Consensus 479 e~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l 558 (659)
T TIGR00954 479 NHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQIL 558 (659)
T ss_pred CEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHH
Confidence 99999999999999999999999999999999875 699999999999999999999874 24566778889
Q ss_pred HHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEE
Q 000702 551 HACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVI 630 (1343)
Q Consensus 551 ~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i 630 (1343)
+.+++.+.++. |.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+. ++. .|+|+|
T Consensus 559 ~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI 633 (659)
T TIGR00954 559 DNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLF 633 (659)
T ss_pred HHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEE
Confidence 99999887777 999999876 5779999999999999999999999999999999999998887654 333 389999
Q ss_pred EEecCCCccccCCEEEEEeC
Q 000702 631 FVTHQVEFLPAADFILVLKE 650 (1343)
Q Consensus 631 ~vtH~~~~l~~~d~i~~l~~ 650 (1343)
+||||++.++.||+|++|++
T Consensus 634 ~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 634 SVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred EEeCchHHHHhCCEEEEEeC
Confidence 99999999999999999973
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.3e-54 Score=493.55 Aligned_cols=439 Identities=24% Similarity=0.404 Sum_probs=343.0
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.+++++++..|+ +..+++||||++++||++|++|+||+|||||+++|.|.|+|++|+|.++|+
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 689999999985 467999999999999999999999999999999999999999999999994
Q ss_pred EEEEccccccc-CccHHHHhccCCCC------CHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSPM------DKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~~------~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
||.|.|++-++ +.||.|||..|.+- +.. +.++..+.+++ .-...+....||-|+||||
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl-----------~vdp~~~V~dLsVG~qQRV 149 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGL-----------PVDPDAKVADLSVGEQQRV 149 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCC-----------CCCccceeecCCcchhHHH
Confidence 79999998764 78999999999863 222 23333333333 2233466778999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
.|-+|||++|++||||||||.|-|...+++|+.+.+....|+|+|+|||+++.+.. ||++.||++|+++..-+ ..
T Consensus 150 EIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~--~~-- 225 (501)
T COG3845 150 EILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD--PV-- 225 (501)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec--CC--
Confidence 99999999999999999999999999999998755555679999999999998765 99999999999864211 00
Q ss_pred cCccHHHHHHHHHHhhhhcCCCCCCCCCCcccccccCcccCCCcCCCCCCCCcccccccccCCchhHHHHHHHHHHHhhh
Q 000702 665 AGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQKAIKEKKKAKRS 744 (1343)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (1343)
. + . . .+...+
T Consensus 226 ----------------------~--------~---------~------------t------------~~ela~------- 235 (501)
T COG3845 226 ----------------------A--------E---------T------------T------------EEELAE------- 235 (501)
T ss_pred ----------------------C--------C---------C------------C------------HHHHHH-------
Confidence 0 0 0 0 000000
Q ss_pred hhhhhhHHHHHhcCcccHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCCCCCCCChhHHHHHHHH
Q 000702 745 RKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMA 824 (1343)
Q Consensus 745 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~ 824 (1343)
++
T Consensus 236 ------------------------------------lM------------------------------------------ 237 (501)
T COG3845 236 ------------------------------------LM------------------------------------------ 237 (501)
T ss_pred ------------------------------------Hh------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHHHHHHHHH
Q 000702 825 LAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQL 904 (1343)
Q Consensus 825 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~ 904 (1343)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHHHHHHHHH
Q 000702 905 VGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYL 984 (1343)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~~~~~~~~ 984 (1343)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000702 985 LDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIIS 1064 (1343)
Q Consensus 985 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s 1064 (1343)
+ ...+.
T Consensus 238 -------------------------------------v---G~~v~---------------------------------- 243 (501)
T COG3845 238 -------------------------------------V---GREVV---------------------------------- 243 (501)
T ss_pred -------------------------------------c---CCccc----------------------------------
Confidence 0 00000
Q ss_pred HHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHH
Q 000702 1065 IERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQAL 1144 (1343)
Q Consensus 1065 ~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L 1144 (1343)
.+.+ .++.-|..-.++++|++..-+.+ -+.+++|||+|++||++||.|-.|-|-|-|+.+|
T Consensus 244 ---------~~~~---------~~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eai 304 (501)
T COG3845 244 ---------LRVV---------KPPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAI 304 (501)
T ss_pred ---------cccc---------cCCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHH
Confidence 0000 01112334579999999976543 3579999999999999999999999999999999
Q ss_pred hcccCCCcceEEEcCeec-CCCChHHHhh-cceeecCCcc----ccCCchhhhcCCCCC----------CCHHHHHHHHH
Q 000702 1145 FRLIEPACGRIIIDNIDI-STIGLHDLRS-RLGIIPQDPN----LFEGTIRCNLDPLEE----------HSDREIWEALD 1208 (1343)
Q Consensus 1145 ~rl~~~~~G~I~IdG~di-~~i~l~~LR~-~i~iVpQdp~----lF~gTIr~NLdp~~~----------~sd~ei~~aL~ 1208 (1343)
.|+..|.+|+|.++|.|+ ...+....|+ .+++||.|.+ ..+-|+.+|+-+... .+-.++.+..+
T Consensus 305 sGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~ 384 (501)
T COG3845 305 SGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR 384 (501)
T ss_pred hCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH
Confidence 999999999999999997 6667777654 6999999994 567799999853321 12233333222
Q ss_pred HcCCchHHhc---ccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcE
Q 000702 1209 KSQLGDIVRG---KDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCT 1284 (1343)
Q Consensus 1209 ~~~L~~~i~~---lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~T 1284 (1343)
+ .+++ .+.+.++++ .+||||+.|++-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.
T Consensus 385 ~-----li~~fdVr~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~A 455 (501)
T COG3845 385 E-----LIEEFDVRAPSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKA 455 (501)
T ss_pred H-----HHHHcCccCCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCE
Confidence 1 1222 134555555 5899999999999999999999999999999999999999999888765 5899
Q ss_pred EEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1285 VCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1285 vI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
|++|+-+|+.+.. ||||.||.+|+++....|++
T Consensus 456 VLLiS~dLDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 456 VLLISEDLDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred EEEEehhHHHHHHhhheeeeeeCCceeccccccc
Confidence 9999999999876 99999999999998888776
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-54 Score=490.82 Aligned_cols=238 Identities=35% Similarity=0.634 Sum_probs=228.4
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|.|+|+|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|.|||+|+..++...+|++|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997655679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred eeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCE
Q 000702 1175 GIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARI 1254 (1343)
Q Consensus 1175 ~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~I 1254 (1343)
+||||+|.+|++|+++|++++...+++++|++++.++|.+++.++|.+||+.++|+|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHHhc
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~~~ 1334 (1343)
|||||||++||+++++.+++.|++.+++||||+||||++++..||||+||++|+++++|+|++|+++ .+.|++|+.+.+
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999985 589999997765
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-50 Score=469.22 Aligned_cols=258 Identities=22% Similarity=0.354 Sum_probs=220.6
Q ss_pred HHhhhHHHHHHhhcCCCCCCCCCC------C---CCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEE
Q 000702 1060 NKIISIERIYQYSQIPGEAPPVIE------D---SRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIV 1130 (1343)
Q Consensus 1060 ~~~~s~eRi~~~~~~~~e~~~~~~------~---~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIV 1130 (1343)
..+++++|+.+|...+.|.....+ . ...+..||..+.|+|+|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 446677777777766554322111 1 0113469999999999999999765567999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecC--CCChHHHhhcceeecCCccccCCchhhhcCCC---CCCCH
Q 000702 1131 GRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIS--TIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL---EEHSD 1200 (1343)
Q Consensus 1131 GrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~--~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~~sd 1200 (1343)
||||||||||+++|+|+++ |++|+|.|||+|++ ++++..+|++++||||+|.+|++|+++|++.. ..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 45667899999999999999999999999832 23555
Q ss_pred HHH-----HHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000702 1201 REI-----WEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKI 1275 (1343)
Q Consensus 1201 ~ei-----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~ 1275 (1343)
++. .++++.+++++ ++++.+++.|.+||||||||+|||||++++|+||||||||++||+++.+.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALWD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCcc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 55677777643 456778899999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1276 IRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1276 l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|++.++++|+|+||||++++.+ ||||+||++|+|+|.|+|+++..++..
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~~ 317 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPKN 317 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCCc
Confidence 9999889999999999999988 999999999999999999999976653
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.4e-48 Score=440.64 Aligned_cols=193 Identities=22% Similarity=0.349 Sum_probs=160.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|.|.||+|+|.++. .++++++|-|.++++||+|||||+|||||++++.|.+.|..|.|.-.- ..+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccch
Confidence 599999999998764 799999999999999999999999999999999999999999885432 12233
Q ss_pred eecCCc---cccCCchhhhcCC-CC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1176 IIPQDP---NLFEGTIRCNLDP-LE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1176 iVpQdp---~lF~gTIr~NLdp-~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
+.-|.- ..++-|.-+|+.| +. ....+++...|.++||..-.+ +.++ ++||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q------~~p~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQ------VVPM----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccc------ccch----hhcccccchhHHHHHHHhc
Confidence 333433 3455666666643 33 355678889999999975433 3444 5899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
.|.||||||||++||.+|-..+.++|.+ |. .+||+|+|+...|.+ +++|++.++|.+...
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe-~~-Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE-FP-GGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc-cC-CceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999999999999975 44 499999999999987 999999999998765
No 106
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-47 Score=393.02 Aligned_cols=222 Identities=27% Similarity=0.446 Sum_probs=195.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecC-CCChHHHhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIS-TIGLHDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~-~i~l~~LR~~i 1174 (1343)
-|+++||+.+|+.. .||+|||++|++||.+.||||||||||||+++|.|+-+|++|+|.|||.++. +.++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999854 5999999999999999999999999999999999999999999999998774 33788899999
Q ss_pred eeecCCccccCC-chhhhcCCCC----CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE----EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~----~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
|+|+|+..||.- |+-+|+.... ..+. +.-.+.|+++||.+....-|. .|||||+||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999975 9999996331 2222 234567899999998887774 6899999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
|||.-+|+++++|||||+||+|.-..+.+.+++..+ |.|+|+|||.+....+ +|||+.||+|+|+|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 999999999999999999999999999999988654 6899999999999988 99999999999999999999998876
Q ss_pred c-HHHHHH
Q 000702 1324 S-MFLKLV 1330 (1343)
Q Consensus 1324 ~-~f~~l~ 1330 (1343)
. +-++..
T Consensus 229 ~~R~~~FL 236 (240)
T COG1126 229 SERTRQFL 236 (240)
T ss_pred CHHHHHHH
Confidence 4 344433
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-47 Score=409.80 Aligned_cols=226 Identities=30% Similarity=0.467 Sum_probs=198.8
Q ss_pred EEEEEEEEEEcCC---CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC---hHHH
Q 000702 1097 IELIDLKVRYGEN---LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG---LHDL 1170 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~---~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---l~~L 1170 (1343)
|+++||++.|... ...+|+||||+|++||+.||||+||||||||++++.|+-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 346999999999999999999999999999999999999999999999999988876 5567
Q ss_pred hhcceeecCCccccC-CchhhhcC-CCC--CCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1171 RSRLGIIPQDPNLFE-GTIRCNLD-PLE--EHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF~-gTIr~NLd-p~~--~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
|++||+|+|++.|++ -|+.+|+. |.. ..+.+ .+.+.|+.+||.|.-.+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999998 69999997 332 23444 4677899999988876655 58999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
+|||||..+|+||+.|||||+||++|.+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999988643 37899999999999988 9999999999999999999999
Q ss_pred hcCCc-HHHHHHHHh
Q 000702 1320 EDKSS-MFLKLVTEY 1333 (1343)
Q Consensus 1320 ~~~~~-~f~~l~~~~ 1333 (1343)
.++.. .=++++.+.
T Consensus 231 ~~Pk~~~t~~fi~~~ 245 (339)
T COG1135 231 ANPKHAITQEFIGET 245 (339)
T ss_pred cCcchHHHHHHHHhh
Confidence 98844 445565543
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.1e-45 Score=415.68 Aligned_cols=240 Identities=51% Similarity=0.792 Sum_probs=224.9
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhh
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRS 1172 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~ 1172 (1343)
..|.|+++|++++|+....++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 45789999999999764456999999999999999999999999999999999999999999999999999998889999
Q ss_pred cceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1173 RLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876545567788999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHHH
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~~ 1332 (1343)
++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998777899999999999999999999999999999999999998888889988754
No 109
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-46 Score=379.83 Aligned_cols=220 Identities=27% Similarity=0.436 Sum_probs=198.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCc-----ceEEEcCeecCC--CCh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPAC-----GRIIIDNIDIST--IGL 1167 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~-----G~I~IdG~di~~--i~l 1167 (1343)
..++++|+++.|+.. .+|+|||++|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 469999999999854 59999999999999999999999999999999999999875 999999999976 578
Q ss_pred HHHhhcceeecCCccccCCchhhhcCCCC-------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1168 HDLRSRLGIIPQDPNLFEGTIRCNLDPLE-------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~gTIr~NLdp~~-------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
..||+++|.|+|.|.-|..||++|+.+.. ..-|+-+.++|+++.||+.+... +.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr-------L~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR-------LHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH-------hhCCccCCChhHHH
Confidence 89999999999999999999999997542 12245578899999999998643 33456779999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||||||||.-+|+||+||||||+||+.+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+++|+|.-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999889999999999988766 9999999999999999999999
Q ss_pred hcCC
Q 000702 1320 EDKS 1323 (1343)
Q Consensus 1320 ~~~~ 1323 (1343)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8764
No 110
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.1e-44 Score=409.77 Aligned_cols=193 Identities=22% Similarity=0.301 Sum_probs=166.9
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
...+++.+|+|.|.++.++.+++++++++.-+++++||++|+||||+++++.+-.+|.+|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 446999999999999887899999999999999999999999999999999999999999998876 789
Q ss_pred ceeecCCccccCCchhhhc---C----CCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1174 LGIIPQDPNLFEGTIRCNL---D----PLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1174 i~iVpQdp~lF~gTIr~NL---d----p~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|++-.|..+=| ..-|. | .++..+++|+.+.|...||..-+... + + ..||||||-|+++|-
T Consensus 429 i~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~-----s-i----~~LSGGQKsrvafA~ 495 (582)
T KOG0062|consen 429 IKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQ-----S-I----ASLSGGQKSRVAFAA 495 (582)
T ss_pred ecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhc-----c-c----cccCCcchhHHHHHH
Confidence 99999988744 22222 1 12334899999999999987655432 2 2 469999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
....+|.+|||||||.+||.++-..+-++|+. |.| -||+|+|+.+.|.. |+.++|.++|+|.-+
T Consensus 496 ~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 496 CTWNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HhcCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 99999999999999999999999999999974 654 79999999999976 999999999999863
No 111
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.2e-44 Score=401.97 Aligned_cols=234 Identities=32% Similarity=0.510 Sum_probs=215.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
+||++.+|+.|+++|+.... ..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999998543 34566788888889999999999999999888888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHH
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~ 1331 (1343)
||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++++++++ .+.|+.++.
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999975 677877664
No 112
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-45 Score=381.75 Aligned_cols=217 Identities=29% Similarity=0.471 Sum_probs=196.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+|+|||++|.+ ..+++|+||+|++||.+.++|+|||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999984 469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCc--hHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLG--DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|-|..-||.- ||.+|+..-. ..+ ++.+.+.|+.++|. +|..+.|. .|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHHH
Confidence 9999999975 9999996322 233 45577889999996 47766664 68999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccc-cccCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTV-IDSDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
||..+|+||+||||.++||+-|...+|+-+.+..+ ++|+++|||+++.. +-+|||.||++|+|+.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999998876543 68999999999875 5599999999999999999999999988
Q ss_pred cHH
Q 000702 1324 SMF 1326 (1343)
Q Consensus 1324 ~~f 1326 (1343)
..|
T Consensus 229 n~F 231 (309)
T COG1125 229 NDF 231 (309)
T ss_pred HHH
Confidence 777
No 113
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-44 Score=417.42 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=218.6
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccccCCCCCcceEEEEeeEEEecCC
Q 000702 385 AQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDATIVLPRGMTNVAIQIENAEFCWYPS 464 (1343)
Q Consensus 385 ~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~ 464 (1343)
+.+++..+|+.+++|+.+..|+..+|..... ..|+..|+..++.+...... ..+....|+++|++++|..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~- 92 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMN- 92 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecC-
Confidence 5688999999999999999998887765443 56899998776533211111 1122347999999999863
Q ss_pred CCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------------eEEEEcccc
Q 000702 465 SSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG---------------TAAYVSQSA 524 (1343)
Q Consensus 465 ~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g---------------~i~~v~Q~~ 524 (1343)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+|
T Consensus 93 ~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~ 172 (329)
T PRK14257 93 RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKP 172 (329)
T ss_pred CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 34579999999999999999999999999999999999997 5799998765 489999999
Q ss_pred cccCccHHHHhccCCCC---C-HH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 525 WIQSGNIEENILFGSPM---D-KA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 525 ~l~~~ti~~Ni~~g~~~---~-~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
|+|++|++|||.|+..+ + ++ .++++++.|++.+++ ++.++++|.+|||||||||+||||++++|+
T Consensus 173 ~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p~ 245 (329)
T PRK14257 173 TPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEPE 245 (329)
T ss_pred ccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 99999999999987532 2 22 256667777765443 467899999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|+||||||++||+++.+++ .+++..+.+++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 246 IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 246 VLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred EEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999998875 5677777778999999999999877 999999999999999999998754
No 114
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.4e-44 Score=395.88 Aligned_cols=221 Identities=62% Similarity=0.960 Sum_probs=209.2
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|.|+++|++++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 46899999999975445699999999999999999999999999999999999999999999999999988888899999
Q ss_pred eeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCE
Q 000702 1175 GIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARI 1254 (1343)
Q Consensus 1175 ~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~I 1254 (1343)
+|+||+|.+|++|+++|++++...+.+++.++++..++.+++..+|.|+++...+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998766778889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecCh
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p 1315 (1343)
|||||||++||+.+...+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 115
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-43 Score=365.07 Aligned_cols=201 Identities=31% Similarity=0.465 Sum_probs=171.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.|+++|++.+|. +..+|+|||++|++||.++|+|||||||||||++|.|+-+|++|+|.++| +
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999874 46799999999999999999999999999999999999999999999999 2
Q ss_pred EEEEccccccc-CccHHHHhccCCC----CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSP----MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
+|+|+|+..|| ..||.|||..+.- .++ ++-.+.++..+|.+-.+. ....|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~-----------yP~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADA-----------YPAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhh-----------CccccCcHHHHHHHH
Confidence 68999998887 5899999998742 222 223334444555444433 456899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||||..+|+++++|||||||||+...++.+-.......|.|.|+|||.+.|... ||||+.|++|+|+++|+++++..+
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999998887544445579999999999999976 999999999999999999998765
No 116
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-43 Score=390.12 Aligned_cols=232 Identities=34% Similarity=0.547 Sum_probs=212.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+....++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
+||+|.+|..|+++|+.... ..+.+++.+.++..++.+++..+|.|+++.......+||+|||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999998643 34566777888899999999999999999888888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHH
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKL 1329 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l 1329 (1343)
||||||++||+.+...+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|+++++.++ .+.|+.+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 999999999999999999999988788999999999999988999999999999999999999864 4555543
No 117
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.1e-42 Score=381.16 Aligned_cols=207 Identities=62% Similarity=0.940 Sum_probs=189.1
Q ss_pred CCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH
Q 000702 1091 WPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL 1170 (1343)
Q Consensus 1091 wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L 1170 (1343)
||..+.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999988888888
Q ss_pred hhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1171 RSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
|+.++|+||+|.+|++|+++|+..+...+++++.++++ +.+....||+||+||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665556666666554 123456899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecCh
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p 1315 (1343)
+|++|||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999988778999999999999988999999999999999875
No 118
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.4e-43 Score=405.22 Aligned_cols=224 Identities=29% Similarity=0.451 Sum_probs=194.6
Q ss_pred EEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hh
Q 000702 1097 IELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR 1171 (1343)
|+++||+++|+.+ ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 57
Q ss_pred hcceeecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1172 SRLGIIPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
++|++|||++.+|. .|+++|+... ...+ ++.+.++|+.++|.+...+.| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 6999999631 1222 234778899999987655443 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+.+|+|||||||||+||++|...|.+.|++..+ +.|||+|||+++.+.. ||||++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998654 7899999999999966 99999999999999999999987
Q ss_pred cCCcHH-HHHHH
Q 000702 1321 DKSSMF-LKLVT 1331 (1343)
Q Consensus 1321 ~~~~~f-~~l~~ 1331 (1343)
++...+ ++++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 665434 44443
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-42 Score=386.24 Aligned_cols=226 Identities=40% Similarity=0.614 Sum_probs=209.7
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|.|+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 469999999999642 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred eeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1175 GIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1175 ~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
+|+||+|.+|.+|+++|+.... ...++++.++++.+++.+++..+|.|+++.+.....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345677888999999999999999999999888889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1254 ILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999999888764
No 120
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.8e-43 Score=380.89 Aligned_cols=213 Identities=32% Similarity=0.516 Sum_probs=188.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.++++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+..|.+|+|++||.|+.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999984 47999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCcc-ccCCchhhhcC----C----CCCCC--HH-HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1176 IIPQDPN-LFEGTIRCNLD----P----LEEHS--DR-EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1176 iVpQdp~-lF~gTIr~NLd----p----~~~~s--d~-ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
||||++. -|.-|++|=+. | +...+ |+ .+.+||+.+++.++..+. + ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHHH
Confidence 9999975 44558888663 2 22222 33 478899999998886542 2 469999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccc-cccCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTV-IDSDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||.++|+||+|||||++||....-.|++.+++.. ++.|+|+|.|+++.. ..||++++|++|+++..|+|+|.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 369999999999876 5599999999999999999999985
Q ss_pred c
Q 000702 1321 D 1321 (1343)
Q Consensus 1321 ~ 1321 (1343)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 3
No 121
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-42 Score=386.25 Aligned_cols=233 Identities=38% Similarity=0.587 Sum_probs=214.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999998888889999999
Q ss_pred ecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999754 345677788899999999999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHHH
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~~ 1331 (1343)
||||||++||+++...+.+.|++..++.|+|+++|+++.+..|||+++|++|++++.|+++++.+ ..+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~-~~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA-KGGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh-cccHHHHHHh
Confidence 99999999999999999999988766889999999999998899999999999999999999986 4577777654
No 122
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-43 Score=367.94 Aligned_cols=227 Identities=28% Similarity=0.440 Sum_probs=189.3
Q ss_pred eEEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC-hHHHhh
Q 000702 1096 TIELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG-LHDLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-l~~LR~ 1172 (1343)
.++++|+++.|+... .++|+||||+|.+||++||||+||||||||.++|.|+.+|++|+|.+||.+..... -...++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999998653 25999999999999999999999999999999999999999999999997765543 335788
Q ss_pred cceeecCCccc-cC--CchhhhcC-CCC----CCCHHHHHHHHHHcCCchH-HhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1173 RLGIIPQDPNL-FE--GTIRCNLD-PLE----EHSDREIWEALDKSQLGDI-VRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1173 ~i~iVpQdp~l-F~--gTIr~NLd-p~~----~~sd~ei~~aL~~~~L~~~-i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
.+.+|+|||.- ++ -||++-|. |.. .-..++++++|+.+||.+- ..+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 89999999962 21 35555553 322 1234569999999999764 44445 368999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCc--EEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDC--TVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~--TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||.-+|++||+|||||+||.-..+.|.+.+.+..+++ |.|+|||++..+.. ||||+||++|+++|.++-+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999998876654 99999999999987 99999999999999999999998
Q ss_pred cCCcHHH-HHHHHh
Q 000702 1321 DKSSMFL-KLVTEY 1333 (1343)
Q Consensus 1321 ~~~~~f~-~l~~~~ 1333 (1343)
.+.-.|. .|.+..
T Consensus 232 ~~~h~ytr~Ll~a~ 245 (252)
T COG1124 232 HPSHPYTRELLEAV 245 (252)
T ss_pred CCccHHHHHHHHhh
Confidence 7444454 444443
No 123
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-42 Score=362.59 Aligned_cols=226 Identities=31% Similarity=0.507 Sum_probs=199.8
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLR 1171 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR 1171 (1343)
-.|++++|+++|+.. .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.||.+++-+ .+|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 469999999999754 699999999999999999999999999999999999999999999999999999864 479
Q ss_pred hcceeecCCccccCC-chhhhcC-CCCCC---CHHHH----HHHHHHcCCchH-HhcccCCCCcccccCCCCCChhHHHH
Q 000702 1172 SRLGIIPQDPNLFEG-TIRCNLD-PLEEH---SDREI----WEALDKSQLGDI-VRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~g-TIr~NLd-p~~~~---sd~ei----~~aL~~~~L~~~-i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+++|+++|...||+. ||+||+. |..+| +++++ ...|+.|||..- ....| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999987 9999997 44443 44444 345788999876 33344 5789999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
.+||||+.-+|+||++|||||+||+-+...+-+.|++..+ +.|+++|||+++++.. ||||+++.+|+|+-.|+|+||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999998888876543 7899999999999977 899999999999999999999
Q ss_pred hhcCCcHHHHHHHHh
Q 000702 1319 LEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1319 l~~~~~~f~~l~~~~ 1333 (1343)
.+.++...++.+...
T Consensus 234 ~~sd~P~v~qf~~G~ 248 (263)
T COG1127 234 LASDDPWVRQFFNGI 248 (263)
T ss_pred HhCCCHHHHHHhcCC
Confidence 998888888877643
No 124
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=5.2e-42 Score=384.39 Aligned_cols=233 Identities=36% Similarity=0.616 Sum_probs=211.2
Q ss_pred EEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1097 IELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
|+++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999753 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred eecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCE
Q 000702 1176 IIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARI 1254 (1343)
Q Consensus 1176 iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~I 1254 (1343)
|+||+|.+|..|+++|+... .....+++.+.++..++.+++..+|.|+++.......+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999754 23456677888888999999999999999998888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHH
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~ 1330 (1343)
|||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|+++++.+. .+..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999999999999999999987678999999999999988999999999999999999999864 45555544
No 125
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.9e-42 Score=378.80 Aligned_cols=219 Identities=33% Similarity=0.520 Sum_probs=201.2
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|.|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++...+...+|+.+
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999975334699999999999999999999999999999999999999999999999999888877788999
Q ss_pred eeecCCccccCCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1175 GIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1175 ~iVpQdp~lF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
+++||+|.+|..|+++|+.... ..+.+++.++++..++.+.+...|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997542 345567888999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeec
Q 000702 1254 ILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g 1313 (1343)
+|||||||++||.++...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998764
No 126
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.4e-42 Score=387.13 Aligned_cols=222 Identities=28% Similarity=0.396 Sum_probs=200.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.|+++|++++|++ +..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~-~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTE-GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCC-CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 4899999999863 24579999999999999999999999999999999999998 799999988 38
Q ss_pred EEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 518 AYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
+|+||+|++|++|+++|+....+++++++.++++.+++...+..+|.+++|.++++|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964445667788899999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHH
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNALVSA 675 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~ 675 (1343)
+||||||++||+.+.+.+. +.+....+++|+|+|||+++.+..||+|++|++|++++.|+++++++....+.+++..
T Consensus 160 lllDEpts~LD~~~~~~l~-~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIR-KTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEECccccCCHHHHHHHH-HHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 9999999999999977665 4555555689999999999988889999999999999999999999876666666543
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-42 Score=389.14 Aligned_cols=216 Identities=26% Similarity=0.438 Sum_probs=196.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+.+|++.. +|+|+||+|+.||.++++||||||||||+++|.|+.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999998643 999999999999999999999999999999999999999999999999999999887 6899
Q ss_pred eecCCccccCC-chhhhcCCCCC-------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLEE-------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~~-------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
+|+|++.||.. ||++||.+.-+ .-++++.++++..++.+.+++.|. .||||||||+|||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999976 99999974321 235678899999999999988875 689999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|+++|++++||||.|+||......+...|++..+ +.|+|.|||+....+. +|||.||.+|+|.+.|+|.|+..++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999998888877543 5799999999877655 999999999999999999999999888
Q ss_pred HH
Q 000702 1325 MF 1326 (1343)
Q Consensus 1325 ~f 1326 (1343)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 77
No 128
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=376.36 Aligned_cols=215 Identities=28% Similarity=0.470 Sum_probs=196.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecC-CCChHHHhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIS-TIGLHDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~-~i~l~~LR~~i 1174 (1343)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.|++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999877 78999999999999999999999999999999999999999999999999998 47889999999
Q ss_pred eeecCCc--cccCCchhhhcCCCC---CCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDP--NLFEGTIRCNLDPLE---EHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp--~lF~gTIr~NLdp~~---~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
|+|+|+| .+|..||.+.+.+.. ..+.+ .+.++|+.+++.++....| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997542 23443 4778999999988754444 57999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCC--cEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFKD--CTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~--~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
.+|..+|+|||||||||+||+...+.+.+.+++..++ .|+|+|||+++.+.. |||++||++|+++.+|+|+++.++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999999987654 699999999999988 9999999999999999999999754
No 129
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-42 Score=372.80 Aligned_cols=209 Identities=29% Similarity=0.425 Sum_probs=183.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+.. +||+||||+|++||.+||+||||||||||+++++|++.|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 49999999999999999999999999999999999999999999999998766432 57899
Q ss_pred eecCCcc---ccCCchhhhcCCCC-----------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1176 IIPQDPN---LFEGTIRCNLDPLE-----------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1176 iVpQdp~---lF~gTIr~NLdp~~-----------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
||||... -|.-||++-+.... ..+.+++.+||+++++.++..+ +++ .|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHHH
Confidence 9999663 47789998775321 1224779999999999987543 453 599999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
+.|||||+++|++|+|||||+++|+.++..|.+.|++..+ ||||++|+|+++.+.. ||+|+.|. +++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 9999999999999999999999999999999999998765 8999999999999876 99999997 6788999999998
Q ss_pred hc
Q 000702 1320 ED 1321 (1343)
Q Consensus 1320 ~~ 1321 (1343)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 130
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-42 Score=397.86 Aligned_cols=219 Identities=28% Similarity=0.386 Sum_probs=185.8
Q ss_pred CCceEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----
Q 000702 1093 ENGTIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI---- 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i---- 1165 (1343)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 345699999999997432 3699999999999999999999999999999999999999999999999998753
Q ss_pred ------------ChHHHhhcceeecCCc--cccCCchhhhcCCCC---CCCHHH----HHHHHHHcCCchHHhcccCCCC
Q 000702 1166 ------------GLHDLRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSDRE----IWEALDKSQLGDIVRGKDQKLE 1224 (1343)
Q Consensus 1166 ------------~l~~LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd~e----i~~aL~~~~L~~~i~~lp~gLd 1224 (1343)
....+|++++||||+| .+|++|+++|+.... ..++++ +.++++.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------- 167 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD---------- 167 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------
Confidence 3567899999999998 689999999996431 223333 344555555531
Q ss_pred cccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEE
Q 000702 1225 TPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVL 1302 (1343)
Q Consensus 1225 t~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIl 1302 (1343)
......+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||||+
T Consensus 168 ~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~ 247 (320)
T PRK13631 168 SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVI 247 (320)
T ss_pred hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 12344567899999999999999999999999999999999999999999998753 4789999999999875 599999
Q ss_pred EEeCCEEeeecChhHHhhc
Q 000702 1303 VLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1303 vl~~G~ive~g~p~eLl~~ 1321 (1343)
||++|++++.|+|+++.++
T Consensus 248 vl~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 248 VMDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EEECCEEEEeCCHHHHhcC
Confidence 9999999999999998754
No 131
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.5e-42 Score=380.75 Aligned_cols=211 Identities=34% Similarity=0.521 Sum_probs=186.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhccc-----CCCcceEEEcCeecCCCC--hHH
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLI-----EPACGRIIIDNIDISTIG--LHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~-----~~~~G~I~IdG~di~~i~--l~~ 1169 (1343)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999753 5999999999999999999999999999999999999 999999999999998876 567
Q ss_pred HhhcceeecCCccccCCchhhhcCCCC---C-C----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1170 LRSRLGIIPQDPNLFEGTIRCNLDPLE---E-H----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+|++++|+||++.+|..|+++|+.... . . .++++.++++.+++.+...+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 888999999999999889999996421 1 1 13457888999998766544321 35799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
++|||||+++|++|||||||++||+++...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+|+++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987666899999999998865 999999999999999998764
No 132
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.9e-40 Score=414.81 Aligned_cols=199 Identities=25% Similarity=0.325 Sum_probs=168.3
Q ss_pred CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCcceEEEcCeecCCCChHHHhhcceeecCCcc-ccC
Q 000702 1109 NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE--PACGRIIIDNIDISTIGLHDLRSRLGIIPQDPN-LFE 1185 (1343)
Q Consensus 1109 ~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~--~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~-lF~ 1185 (1343)
+....|+|||=-++||--.|++|.||||||||++.|.+-.. .-+|.|+|||.+..+ +..++++|||.|++. +=.
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999998654 347999999998765 788999999999885 444
Q ss_pred CchhhhcCC------CCCCCHHH----HHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC-CE
Q 000702 1186 GTIRCNLDP------LEEHSDRE----IWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA-RI 1254 (1343)
Q Consensus 1186 gTIr~NLdp------~~~~sd~e----i~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~-~I 1254 (1343)
-||||-|.+ -.+.+++| +.++.+..+|.++- |..||.-|..||..||.||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 599999852 12344444 56777777776653 45688888999999999999999999999 89
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccc--cccCEEEEEe-CCEEeeecChhH
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTV--IDSDLVLVLS-DGRVAEFDTPGR 1317 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti--~~~DrIlvl~-~G~ive~g~p~e 1317 (1343)
|.||||||+||.++...|.+.+|+.. .|+||++.=|.++.. +.+||++.|+ .|+.|-+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999865 589999999999864 5699999997 578999988654
No 133
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-42 Score=381.77 Aligned_cols=212 Identities=32% Similarity=0.460 Sum_probs=185.9
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh---HHHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL---HDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l---~~LR~~ 1173 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|+.
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999987764 567889
Q ss_pred ceeecCCccccCC-chhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSL 1244 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1244 (1343)
++|+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.++..+.+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 999999642 1122 234677888888866543322 4799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1245 GRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1245 ARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998643 7899999999998876 999999999999999999998754
No 134
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.8e-42 Score=345.26 Aligned_cols=207 Identities=27% Similarity=0.399 Sum_probs=187.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR~~ 1173 (1343)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|+||||||||+++|++...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999987 77999999999999999999999999999999999999999999999999999998665 8999
Q ss_pred ceeecCCccccCC-chhhhcCC-CC--CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDP-LE--EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp-~~--~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
||+|+||.-|... |+.||+.+ .. ..+ .+.+.++|+.+||.+....+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999988765 99999973 21 122 3457889999999999998885 6899999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccC-EEEEEeCCEEeeecCh
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSD-LVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~D-rIlvl~~G~ive~g~p 1315 (1343)
||+..+|++||-||||.+||+++...|++.+.+.- .|.||++.||+.+.+.++. |++.+++|+++....+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998754 4899999999999998854 7999999999987654
No 135
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-41 Score=361.50 Aligned_cols=204 Identities=30% Similarity=0.444 Sum_probs=177.8
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---H-
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---L- 1170 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---L- 1170 (1343)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|.++-.|++|.|.++|.|+..++-+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999997543 36999999999999999999999999999999999999999999999999999998544 3
Q ss_pred hhcceeecCCccccCC-chhhhcCC---CCCC----CHHHHHHHHHHcCCchHHh-cccCCCCcccccCCCCCChhHHHH
Q 000702 1171 RSRLGIIPQDPNLFEG-TIRCNLDP---LEEH----SDREIWEALDKSQLGDIVR-GKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF~g-TIr~NLdp---~~~~----sd~ei~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
|++||+|+|+..|++. |++||+.. +... ..+...+.++.+||.+... ..| .+||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999999876 99999972 2222 2345677788889986655 334 4789999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEee
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive 1311 (1343)
+||||||+.+|+|++.||||++||.+|.+.|.+.+++..+ ++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999998743 689999999999999999999999999543
No 136
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=377.83 Aligned_cols=223 Identities=31% Similarity=0.475 Sum_probs=194.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998888888899999
Q ss_pred eecCCccccCCchhhhcCCCC---CCCHHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcC
Q 000702 1176 IIPQDPNLFEGTIRCNLDPLE---EHSDREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQ 1251 (1343)
Q Consensus 1176 iVpQdp~lF~gTIr~NLdp~~---~~sd~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~ 1251 (1343)
|+||+|.+|..|+++|+.... ...++++.+.++..++. +.... ...+||||||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATR-----------DVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhC-----------CcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997432 22345677888888885 33222 3357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHHH
Q 000702 1252 ARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFLK 1328 (1343)
Q Consensus 1252 ~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~ 1328 (1343)
|++|||||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||||++|++|++++.|++++++.++...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999998764 37899999999999875 9999999999999999999998765545555
Q ss_pred HHH
Q 000702 1329 LVT 1331 (1343)
Q Consensus 1329 l~~ 1331 (1343)
.+.
T Consensus 230 ~~~ 232 (241)
T PRK14250 230 LFI 232 (241)
T ss_pred HHH
Confidence 443
No 137
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-41 Score=379.66 Aligned_cols=219 Identities=23% Similarity=0.393 Sum_probs=193.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC---CCcceEEEcCeecCCCChHHHhh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE---PACGRIIIDNIDISTIGLHDLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~l~~LR~ 1172 (1343)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.|+...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 3789999999974 369999999999999999999999999999999999985 68999999999999888888899
Q ss_pred cceeecCCccccCCchhhhcCCCC---C------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1173 RLGIIPQDPNLFEGTIRCNLDPLE---E------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~gTIr~NLdp~~---~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+++..+ ..+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996431 1 1234577889999997665432 23345789999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
||||++++|++|+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987778999999999998865 9999999999999999999998654
Q ss_pred C
Q 000702 1323 S 1323 (1343)
Q Consensus 1323 ~ 1323 (1343)
.
T Consensus 233 ~ 233 (246)
T PRK14269 233 K 233 (246)
T ss_pred C
Confidence 3
No 138
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=355.06 Aligned_cols=221 Identities=26% Similarity=0.407 Sum_probs=193.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC---hHHHhh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG---LHDLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---l~~LR~ 1172 (1343)
.|+++||+..|+.+ ..+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++..+. ++++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 58999999999744 56999999999999999999999999999999999999999999999999999988 667899
Q ss_pred cceeecCCccccCC-chhhhcCC------------CCCCCH---HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1173 RLGIIPQDPNLFEG-TIRCNLDP------------LEEHSD---REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~g-TIr~NLdp------------~~~~sd---~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
+||+|+|+|.|-.. |+-+|+.. ++-++. ....+||+++|+.+..... .++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999998865 89999731 233333 3478899999998876543 257999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
||+||++|||||.++|+|++-|||||+||+++.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999865 47899999999999876 9999999999999999
Q ss_pred ChhHHhhcCCcHHHHHHH
Q 000702 1314 TPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1314 ~p~eLl~~~~~~f~~l~~ 1331 (1343)
++.||-+ ..+...+.
T Consensus 231 ~~~el~~---~~~~~iYg 245 (258)
T COG3638 231 PASELTD---EALDEIYG 245 (258)
T ss_pred ChhhhhH---HHHHHHhc
Confidence 9999643 34555554
No 139
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=385.70 Aligned_cols=215 Identities=29% Similarity=0.425 Sum_probs=191.4
Q ss_pred eEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1096 TIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred eeecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+++||+| .++..|+++|+.... ..+ ++.+.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356779999997431 122 345788999999977665443 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999988653 7899999999999888999999999999999999998764
No 140
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-41 Score=395.08 Aligned_cols=224 Identities=27% Similarity=0.432 Sum_probs=192.4
Q ss_pred EEEEEEEEEEcC--CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hh
Q 000702 1097 IELIDLKVRYGE--NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR 1171 (1343)
|+++||+++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred hcceeecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1172 SRLGIIPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
++|+||||++.+|. .|+++|+... ...+ ++++.++++.+++.++..+.| .+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP-----------AQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999986 6999999632 1222 245677888888876544332 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998653 7899999999999876 99999999999999999999987
Q ss_pred cCCcHHH-HHHH
Q 000702 1321 DKSSMFL-KLVT 1331 (1343)
Q Consensus 1321 ~~~~~f~-~l~~ 1331 (1343)
++...+. .++.
T Consensus 231 ~~~~~~~~~~~~ 242 (343)
T PRK11153 231 HPKHPLTREFIQ 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 6544343 3443
No 141
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-41 Score=393.20 Aligned_cols=218 Identities=23% Similarity=0.356 Sum_probs=192.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999422 4699999999999999999999999999999999999999999999999999987765 47899
Q ss_pred eecCCccccC-CchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFE-GTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~-gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
+|||++.+|. .|+++|+.... ..+ .+++.++++.++|.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 59999997431 122 245778899999988776655 3789999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999987654 6899999999998765 999999999999999999999988766
Q ss_pred HHH
Q 000702 1325 MFL 1327 (1343)
Q Consensus 1325 ~f~ 1327 (1343)
.|.
T Consensus 229 ~~~ 231 (356)
T PRK11650 229 TFV 231 (356)
T ss_pred HHH
Confidence 553
No 142
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6e-41 Score=372.75 Aligned_cols=217 Identities=30% Similarity=0.463 Sum_probs=197.6
Q ss_pred CCceEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHh
Q 000702 1093 ENGTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR 1171 (1343)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999753 23699999999999999999999999999999999999999999999999999888777888
Q ss_pred hcceeecCCccccCCchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1172 SRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
++++|+||+|.+|.+|+++|++.. .....+++++..+..++.+++..++.|+++.+.+...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999853 3334556677777788889999998899988888899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEE
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRV 1309 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~i 1309 (1343)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777899999999999988999999999975
No 143
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-41 Score=392.18 Aligned_cols=217 Identities=24% Similarity=0.399 Sum_probs=192.6
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.+ |++|
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999974 4599999999999999999999999999999999999999999999999999887654 5789
Q ss_pred eeecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
++|||++.+|.. |+++|+.+.- ..+ ++++.++++.+++.++..+.| ..||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 9999997421 122 346788999999977655443 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
||+++|++|+||||||+||..+...+.+.|++..+ ++|+|+|||+++.+.. ||||+||++|++++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988754 7899999999999855 99999999999999999999998887
Q ss_pred cHH
Q 000702 1324 SMF 1326 (1343)
Q Consensus 1324 ~~f 1326 (1343)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 655
No 144
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.4e-41 Score=371.64 Aligned_cols=210 Identities=25% Similarity=0.358 Sum_probs=183.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++||+++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999753246999999999999999999999999999999999999999999999999987643 567889999
Q ss_pred ecCCcccc-CCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLF-EGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF-~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+... +.+ .+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKAN-------KRA----RTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHh-------Chh----hhCCHHHHHHHHHHHHH
Confidence 99999998 579999986321 112 245778888888865443 222 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999987777999999999999875 999999999999999999875
No 145
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-41 Score=384.30 Aligned_cols=215 Identities=31% Similarity=0.488 Sum_probs=186.3
Q ss_pred eEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC--hHHH
Q 000702 1096 TIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG--LHDL 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--l~~L 1170 (1343)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 388999999997532 36999999999999999999999999999999999999999999999999998754 4578
Q ss_pred hhcceeecCCc--cccCCchhhhcCCCC---CCCH----HHHHHHHHHcCCc--hHHhcccCCCCcccccCCCCCChhHH
Q 000702 1171 RSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSD----REIWEALDKSQLG--DIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1171 R~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
|++|+||||+| .+|..|+++|+.... ..++ +.+.++++.++|. ++. |. ....||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-------~~----~~~~LSgGq~ 150 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYK-------DK----SPFELSGGQK 150 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhc-------cC----CcccCCHHHH
Confidence 89999999998 578899999996421 2233 3467888888885 222 22 2357999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeCCEEeeecChh
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~ 1316 (1343)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|+++
T Consensus 151 qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 151 RRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998653 789999999999985 49999999999999999999
Q ss_pred HHhhc
Q 000702 1317 RLLED 1321 (1343)
Q Consensus 1317 eLl~~ 1321 (1343)
++++.
T Consensus 231 ~~~~~ 235 (287)
T PRK13637 231 EVFKE 235 (287)
T ss_pred HHHhC
Confidence 98753
No 146
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=376.90 Aligned_cols=222 Identities=24% Similarity=0.349 Sum_probs=191.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999974 3599999999999999999999999999999999999997 48999999999864 3445
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---C-C----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---E-H----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|..|+++|+.... . . .++.+.++++.+++.+.+. ..+|+. ..+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~~----~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNTN----ALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhCC----cccCCHHHHH
Confidence 6788999999999999999999996421 1 1 1345778888888865432 334443 4689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999999865 9999999999999999999998
Q ss_pred hcCCcHH
Q 000702 1320 EDKSSMF 1326 (1343)
Q Consensus 1320 ~~~~~~f 1326 (1343)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7654433
No 147
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=376.40 Aligned_cols=220 Identities=26% Similarity=0.397 Sum_probs=191.2
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CC
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IG 1166 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~ 1166 (1343)
.+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999974 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHHhhcceeecCCccccCCchhhhcCCCC----CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1167 LHDLRSRLGIIPQDPNLFEGTIRCNLDPLE----EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1167 l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~----~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
...+|++++|+||+|.+|..|+++|+.... ..+ +++++++++.+++.+.+.. ...+...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 667899999999999999999999997421 122 2457888999888654322 2233456899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
|||++|||||+++|+||||||||++||.++.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcC
Q 000702 1318 LLEDK 1322 (1343)
Q Consensus 1318 Ll~~~ 1322 (1343)
+.+.+
T Consensus 242 ~~~~~ 246 (260)
T PRK10744 242 IFTKP 246 (260)
T ss_pred HHhCC
Confidence 98654
No 148
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-40 Score=374.62 Aligned_cols=221 Identities=29% Similarity=0.455 Sum_probs=190.6
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC-----cceEEEcCeecCCC--ChHH
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA-----CGRIIIDNIDISTI--GLHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~i--~l~~ 1169 (1343)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 5999999999999999999999999999999999999998 99999999999763 4556
Q ss_pred HhhcceeecCCccccCCchhhhcCCC---CC-CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1170 LRSRLGIIPQDPNLFEGTIRCNLDPL---EE-HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~gTIr~NLdp~---~~-~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
.|++++|+||++.+|..|+++|+... .. .+ ++++.++++.+++.+.+.. .++ ....+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RLH----DSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---Hhh----CCcccCCHHHHHH
Confidence 78899999999999999999999632 11 12 2457788999998744421 122 2335899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+++++.+
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999998865 99999999999999999999987
Q ss_pred cCCcHH
Q 000702 1321 DKSSMF 1326 (1343)
Q Consensus 1321 ~~~~~f 1326 (1343)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 654444
No 149
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-40 Score=381.06 Aligned_cols=215 Identities=26% Similarity=0.406 Sum_probs=192.1
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++|+
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888889999
Q ss_pred eecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|+||+| .++..|+++||.... ..+ ++++.++++.++|.+++...| ..||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 466789999997421 122 244778889999987766554 379999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+.+|+||||||||++||+.+...+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998654 7899999999999988999999999999999999998753
No 150
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-38 Score=344.56 Aligned_cols=472 Identities=21% Similarity=0.288 Sum_probs=340.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChhhhHHHHhhhhhhhcccchhhHHHH
Q 000702 818 LLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGF 897 (1343)
Q Consensus 818 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G~ilnR~s~D~~~id~~l~~~~~~~ 897 (1343)
++..|.++.....+.+.+.......++...-.+++.++.++++.+|+.-+++...++++.++++|+..|. .-...+..+
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~~ 128 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPEL 128 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHHH
Confidence 4444444444445555666777788899999999999999999999999999999999999999999998 333445668
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhhccchheeecCcHHHH
Q 000702 898 ASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRF 977 (1343)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~r~l~rl~~~~~sp~~~~~~etl~G~~tIraf~~~~~~ 977 (1343)
.+..+..+++.+.+++.+|++.++.+..+++.++.+...++.--+-.+...+....+..+++..++|.+..+..+...++
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 88888899999999999999887776666655554433333333333334445567889999999999999987755444
Q ss_pred HHHHHH------HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 000702 978 MKRNLY------LLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRW 1051 (1343)
Q Consensus 978 ~~~~~~------~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~ 1051 (1343)
...... .-+...+..........|-++.+-.+.+.++.+. ...+.-+...+.......+.+-+++..+
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~la------l~~~w~st~~a~tivlvlLflr~pL~s~ 282 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLA------LSLGWASTNVAATIVLVLLFLRTPLLSA 282 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH------HhhccchhhHHHHHHHHHHHHhhHHHHH
Confidence 332211 1111222222222344454443322222211111 1111111111111222233456778888
Q ss_pred HHHHHHHHHHhhhHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEc
Q 000702 1052 ILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVG 1131 (1343)
Q Consensus 1052 ~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVG 1131 (1343)
+.....+-...++.+++.++...|..+. .....+.++| ..||++||.|.|.+.. --+..||++|++||.|=|+|
T Consensus 283 vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG 356 (546)
T COG4615 283 VGILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIG 356 (546)
T ss_pred HhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEEC
Confidence 8888888888999999998875332211 1111222234 4699999999998763 35788999999999999999
Q ss_pred CCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcC
Q 000702 1132 RTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQ 1211 (1343)
Q Consensus 1132 rTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~ 1211 (1343)
.|||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|+-|-+||+.++- |.+..+.+.+..-|++..
T Consensus 357 ~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~----~e~~as~q~i~~~LqrLe 432 (546)
T COG4615 357 GNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG----PEGKASPQLIEKWLQRLE 432 (546)
T ss_pred CCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC----CccCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999997652 333466666766666655
Q ss_pred CchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEec
Q 000702 1212 LGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIA 1289 (1343)
Q Consensus 1212 L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~Ia 1289 (1343)
+.....-..+.+ ++ ..||-|||.|+++--|++-+.+|+++||=-+--|+.=.+...+.+--.. .|+||+.||
T Consensus 433 l~~ktsl~d~~f-s~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIs 506 (546)
T COG4615 433 LAHKTSLNDGRF-SN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAIS 506 (546)
T ss_pred HhhhhcccCCcc-cc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEe
Confidence 544332221111 11 3699999999999999999999999999999999999998877665433 489999999
Q ss_pred cCcccccccCEEEEEeCCEEeee
Q 000702 1290 HRIPTVIDSDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1290 Hrl~ti~~~DrIlvl~~G~ive~ 1312 (1343)
|+-.-...+||++.|++|+++|.
T Consensus 507 HDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 507 HDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred cCchhhhhHHHHHHHhcCceeec
Confidence 99999999999999999999987
No 151
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-41 Score=380.53 Aligned_cols=212 Identities=27% Similarity=0.404 Sum_probs=188.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred eecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 678899999997421 122 345788899999977665544 369999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHh
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||+++|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+. .||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998764 3789999999999985 49999999999999999997653
No 152
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-41 Score=362.87 Aligned_cols=207 Identities=27% Similarity=0.372 Sum_probs=174.2
Q ss_pred EEEEeeEEEecCC--CCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------
Q 000702 452 IQIENAEFCWYPS--SSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~--~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------- 515 (1343)
|+++++++.|+.. ....+|+||||+|++||+.+|+|.||+|||||++++.|+-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999988752 134699999999999999999999999999999999999999999999999
Q ss_pred --eEEEEcccccccC-ccHHHHhccCCCC----CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 516 --TAAYVSQSAWIQS-GNIEENILFGSPM----DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 516 --~i~~v~Q~~~l~~-~ti~~Ni~~g~~~----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+||+++|++-+++ .||.+||.|..+. ..+..++|.+.+.+. |+....+....+|||||||||+||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelV--------gL~dk~~~yP~qLSGGQKQRVaIA 153 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELV--------GLSDKADRYPAQLSGGQKQRVAIA 153 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHc--------CChhhhccCchhcCcchhhHHHHH
Confidence 3899999998876 8999999997552 233444455444332 222233456789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
|||..+|+||+.|||||||||++.+.|++.+.+-. .-|-|+++|||.++.++. ||||.+|++|+++++|+..++..+.
T Consensus 154 RALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 154 RALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred HHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 99999999999999999999999999987543322 238999999999999987 9999999999999999999987653
No 153
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=372.45 Aligned_cols=213 Identities=25% Similarity=0.429 Sum_probs=184.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999974 469999999999999999999999999999999999999999999999999876553 367899
Q ss_pred eecCCccccC-CchhhhcCCCCC---C----C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1176 IIPQDPNLFE-GTIRCNLDPLEE---H----S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1176 iVpQdp~lF~-gTIr~NLdp~~~---~----s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
|+||+|.+|. .|+++|+..... . . ++++.++++..++.+...+.+ .+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----------AQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 9999999986 599999974211 1 1 234667788888865544322 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999987643 6899999999998765 99999999999999999999986
Q ss_pred cCC
Q 000702 1321 DKS 1323 (1343)
Q Consensus 1321 ~~~ 1323 (1343)
++.
T Consensus 227 ~~~ 229 (239)
T cd03296 227 HPA 229 (239)
T ss_pred CCC
Confidence 543
No 154
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=375.50 Aligned_cols=219 Identities=25% Similarity=0.388 Sum_probs=189.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3455
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC----CC----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL----EE----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||++.+|.+|+++|+... .. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 778899999999999999999999632 11 123467788899888665432 123344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000702 1320 EDKS 1323 (1343)
Q Consensus 1320 ~~~~ 1323 (1343)
+.+.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 6543
No 155
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7.5e-41 Score=369.30 Aligned_cols=202 Identities=24% Similarity=0.361 Sum_probs=176.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR~~ 1173 (1343)
|+++|++++|+++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999975434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred ceeecCCccccC-CchhhhcCCC----C---CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPL----E---EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~----~---~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++|+||+|.+|. .|+++|+... . ...++++.++++.+++.++....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999987 5999999632 1 112456888999999877655443 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEE
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRV 1309 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~i 1309 (1343)
|||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998764 37899999999999875 899999999975
No 156
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.1e-40 Score=373.40 Aligned_cols=212 Identities=27% Similarity=0.452 Sum_probs=182.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i~ 1175 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999974 359999999999999999999999999999999999999999999999999988876654 56799
Q ss_pred eecCCccccCC-chhhhcCCCC----CC-------------CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChh
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLE----EH-------------SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVG 1237 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~----~~-------------sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1237 (1343)
|+||+|.+|.+ |+++|+.... .. ..+.+.++++..++.+.. ......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLA-----------DRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchh-----------hCChhhCCHH
Confidence 99999999987 9999986321 10 122355666666664432 2233579999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecCh
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p 1315 (1343)
||||++||||++.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998764 57899999999999866 999999999999999999
Q ss_pred hHHhhc
Q 000702 1316 GRLLED 1321 (1343)
Q Consensus 1316 ~eLl~~ 1321 (1343)
+++.++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 157
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8e-41 Score=333.12 Aligned_cols=210 Identities=27% Similarity=0.426 Sum_probs=186.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|.+++|.++|... + =.++++|++||+|||+|+||||||||++++.||..|.+|+|.|+|+|....++.+ +-+++
T Consensus 2 l~L~~V~~~y~~~-~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-P---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVSM 75 (231)
T ss_pred ccccceEEeeCcc-e---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChhh
Confidence 5678999999753 2 2478999999999999999999999999999999999999999999998877764 56999
Q ss_pred ecCCccccCC-chhhhcCCC----CCC---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL----EEH---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~----~~~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
++||..||.- ||++|+..+ -.. ..+.+..++.++||.++.+++|. .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999976 999999743 222 34568999999999999999985 5799999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||+..|+-+++++..+
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999999888887765 46799999999998866 99999999999999999999997554
No 158
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=374.23 Aligned_cols=211 Identities=29% Similarity=0.455 Sum_probs=184.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC---hHHHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG---LHDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---l~~LR~~ 1173 (1343)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999752 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred ceeecCCccccC-CchhhhcCCCC---------------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChh
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPLE---------------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVG 1237 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~~---------------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1237 (1343)
++++||++.+|. .|+++|+.... ...++++.++++..++.+.... .+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQ-----------RADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCC-----------CcccCCHH
Confidence 999999999887 69999996310 1123456777888887654322 33579999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCccccc-ccCEEEEEeCCEEeeecC
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~ 1314 (1343)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999864 3789999999999998 499999999999999999
Q ss_pred hhHHh
Q 000702 1315 PGRLL 1319 (1343)
Q Consensus 1315 p~eLl 1319 (1343)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99974
No 159
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-40 Score=390.43 Aligned_cols=216 Identities=24% Similarity=0.363 Sum_probs=192.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999974 3589999999999999999999999999999999999999999999999999887764 67899
Q ss_pred eecCCccccC-CchhhhcCCC-C--CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFE-GTIRCNLDPL-E--EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~-gTIr~NLdp~-~--~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
+|||++.+|. .|+++|+.+. . ..+ ++.+.++++..+|.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 5999999742 1 122 345788899998877665444 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+++++|+|+++.+++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999987654 6899999999998765 999999999999999999999988776
Q ss_pred HH
Q 000702 1325 MF 1326 (1343)
Q Consensus 1325 ~f 1326 (1343)
.|
T Consensus 229 ~~ 230 (353)
T TIGR03265 229 PF 230 (353)
T ss_pred HH
Confidence 66
No 160
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-40 Score=362.82 Aligned_cols=199 Identities=27% Similarity=0.372 Sum_probs=182.8
Q ss_pred EEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1097 IELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
|+++||+++|++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997642 3699999999999999999999999999999999999999999999999 6
Q ss_pred ceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1174 LGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1174 i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
|+|+||+|.+|++|+++|+.+....++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765566777889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHH-HHHHhcC-CcEEEEeccCcccccccCEEEEEeCCE
Q 000702 1254 ILVLDEATASVDTATDNLIQK-IIRTEFK-DCTVCTIAHRIPTVIDSDLVLVLSDGR 1308 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~-~l~~~~~-~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1308 (1343)
+++|||||++||.++.+.+.+ .+++..+ +.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 5665533 689999999999998899999999985
No 161
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=5.1e-38 Score=375.30 Aligned_cols=465 Identities=21% Similarity=0.212 Sum_probs=329.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccChh------hhHHHHhhhhhhhcccch
Q 000702 818 LLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAG------RILNRVSIDQSVVDLDIP 891 (1343)
Q Consensus 818 ~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~vl~~p~~ff~~~~~G------~ilnR~s~D~~~id~~l~ 891 (1343)
.+.+|..++.+...+...+.++...+..+--.-+-+.++++-+... .||.....| ..=+|+..|+...-...-
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~ 166 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTL 166 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhHH
Confidence 4566777777777777778887777777777777777777777666 555444333 233688888876665544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHH-HHHH----HHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000702 892 FRLGGFASTTIQLVGIIGVMTM--------------VTWQVLLL-VIPM----AVACLWMQKYYMASSRELVRIVSIQKS 952 (1343)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~ip~----~~~~~~~~~~~~~~~r~l~rl~~~~~s 952 (1343)
.....++.+++++++..+++.- ..|.+++. ++.. .++.+++.+...+-.-+..+.|..-|.
T Consensus 167 ~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~ 246 (604)
T COG4178 167 DLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY 246 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH
Confidence 4455555555555544443331 11112211 1111 122234555555555666666666665
Q ss_pred hHHHHHHHhhccchheeecCcHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCH
Q 000702 953 PIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDP 1031 (1343)
Q Consensus 953 p~~~~~~etl~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~~~~ 1031 (1343)
-+. -.-+..+.|-.|+.|+...++.....+.-...+......+.++...-...+-+.+.+-.++ .-.+..|.++-
T Consensus 247 ~Lv----rv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~ 322 (604)
T COG4178 247 SLV----RVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITF 322 (604)
T ss_pred HHH----HHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChH
Confidence 443 3344566677788777776666666665555555555555444444433333222111111 12245788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhc------CCCCCCCCCCCCCCCCCCCCCceEEEEEEEEE
Q 000702 1032 SMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQ------IPGEAPPVIEDSRPPSSWPENGTIELIDLKVR 1105 (1343)
Q Consensus 1032 ~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~------~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs~~ 1105 (1343)
|.+..+.....++...+.|++..+..+..-..++.|+.++.+ .+.+.+.... .+....-.....|+|+|+++.
T Consensus 323 G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l~ 401 (604)
T COG4178 323 GGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSLR 401 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeEE
Confidence 998888888899999999999999999999999999999974 2222221100 000000001468999999999
Q ss_pred EcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccC
Q 000702 1106 YGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFE 1185 (1343)
Q Consensus 1106 Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~ 1185 (1343)
-+++. ..|+++||+|+|||.+-|.|+||||||||+++|.|+.+..+|+|.+-. -+++-++||.|++-.
T Consensus 402 ~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~ 469 (604)
T COG4178 402 TPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQ 469 (604)
T ss_pred CCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCC
Confidence 87655 689999999999999999999999999999999999999999986641 145889999999999
Q ss_pred CchhhhcC-CCC--CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCC
Q 000702 1186 GTIRCNLD-PLE--EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATA 1262 (1343)
Q Consensus 1186 gTIr~NLd-p~~--~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs 1262 (1343)
||+||-|. |.. +++|+|+.++|.+|+|.+++.++.+- +. =..-||+||||||++||.||++|++++||||||
T Consensus 470 GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATs 544 (604)
T COG4178 470 GTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-DR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATS 544 (604)
T ss_pred ccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-Cc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchh
Confidence 99999997 443 38999999999999999999887432 21 234699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEe
Q 000702 1263 SVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLS 1305 (1343)
Q Consensus 1263 ~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~ 1305 (1343)
+||.+++..+.+.++++.+++|+|.|+||.....-.++.+-++
T Consensus 545 ALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 545 ALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred ccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 9999999999999999999999999999977776677766554
No 162
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.3e-41 Score=390.86 Aligned_cols=205 Identities=28% Similarity=0.398 Sum_probs=182.5
Q ss_pred CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH----hhcceeecCCccccCC
Q 000702 1111 PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL----RSRLGIIPQDPNLFEG 1186 (1343)
Q Consensus 1111 ~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L----R~~i~iVpQdp~lF~g 1186 (1343)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+...+ |++++||||++.+|..
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 358999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEe
Q 000702 1187 -TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLD 1258 (1343)
Q Consensus 1187 -TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLD 1258 (1343)
|+++|+.... ..+ .+++.++|+.++|.++..+.| .+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999996321 122 355788899999977765544 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHH
Q 000702 1259 EATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMF 1326 (1343)
Q Consensus 1259 EaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f 1326 (1343)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998764 37899999999998654 99999999999999999999998765444
No 163
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-41 Score=380.70 Aligned_cols=218 Identities=25% Similarity=0.405 Sum_probs=196.3
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++||+.+|+ ...+++|+||+|++||.+.++|||||||||++++|.||..|++|+|.+||.||..++++. +.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~k--R~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEK--RPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhh--ccc
Confidence 4699999999998 346999999999999999999999999999999999999999999999999999999874 789
Q ss_pred eeecCCccccCC-chhhhcCCCCC----CCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE----HSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~----~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++|+|+..||.- ||++|+.+.-. ..+ +.+.++|+.++|.++-.+.|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999975 99999975422 233 367899999999998877764 6899999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccc-cccCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTV-IDSDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
|||..+|++|+||||-|+||..-...++.-+++..+ +.|.|.|||+-+.. .-+|||.||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 999999999999999999999999999988887543 78999999998765 569999999999999999999999999
Q ss_pred CcHHH
Q 000702 1323 SSMFL 1327 (1343)
Q Consensus 1323 ~~~f~ 1327 (1343)
...|-
T Consensus 229 ~~~fV 233 (352)
T COG3842 229 ATRFV 233 (352)
T ss_pred chHHH
Confidence 88773
No 164
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-40 Score=381.67 Aligned_cols=215 Identities=27% Similarity=0.434 Sum_probs=184.4
Q ss_pred eEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----ChH
Q 000702 1096 TIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI----GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~l~ 1168 (1343)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999997432 3699999999999999999999999999999999999999999999999999754 345
Q ss_pred HHhhcceeecCCc--cccCCchhhhcCCCC---CCCH----HHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhH
Q 000702 1169 DLRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSD----REIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
.+|++|+||||+| .+|..|+++|+.... ..+. +.+.++++.++|. +.. .....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVM-----------SQSPFQMSGGQ 150 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhh-----------hCCcccCCHHH
Confidence 7899999999998 588899999996421 1232 3355667777664 222 22346899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCccccc-ccCEEEEEeCCEEeeecCh
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p 1315 (1343)
|||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|++
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999764 4799999999999985 5999999999999999999
Q ss_pred hHHhhc
Q 000702 1316 GRLLED 1321 (1343)
Q Consensus 1316 ~eLl~~ 1321 (1343)
+++.++
T Consensus 231 ~~~~~~ 236 (286)
T PRK13646 231 KELFKD 236 (286)
T ss_pred HHHHhC
Confidence 998864
No 165
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-40 Score=371.69 Aligned_cols=214 Identities=30% Similarity=0.460 Sum_probs=186.6
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hh
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR 1171 (1343)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997531 26999999999999999999999999999999999999999999999999998776543 47
Q ss_pred hcceeecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1172 SRLGIIPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+.+ .+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP-----------AQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 88999999999997 5999999631 1112 346788888888876554432 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998643 7899999999999865 99999999999999999999875
Q ss_pred c
Q 000702 1321 D 1321 (1343)
Q Consensus 1321 ~ 1321 (1343)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 166
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=381.08 Aligned_cols=214 Identities=26% Similarity=0.390 Sum_probs=185.0
Q ss_pred EEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC----CChHH
Q 000702 1097 IELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST----IGLHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i~l~~ 1169 (1343)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|++||.+++. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997532 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhcceeecCCc--cccCCchhhhcCCCC---CCCH----HHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhHH
Q 000702 1170 LRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSD----REIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1170 LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
+|++++||+|+| .+|..|+.+|+.... ..+. +++.++++.+++. ++..+ ...+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEK-----------SPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccC-----------CcccCCHHHH
Confidence 899999999998 789999999996431 1222 3467778888884 33322 2357999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~e 1317 (1343)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998754 3789999999999885 499999999999999999999
Q ss_pred Hhhc
Q 000702 1318 LLED 1321 (1343)
Q Consensus 1318 Ll~~ 1321 (1343)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 167
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=373.04 Aligned_cols=221 Identities=25% Similarity=0.420 Sum_probs=189.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred ecCCccccC-CchhhhcCCCC---CCC----HHHHHHHHHHcCCch--HHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1177 IPQDPNLFE-GTIRCNLDPLE---EHS----DREIWEALDKSQLGD--IVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~--~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+ ... ....+||||||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-----------~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFAD-----------RYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHh-----------cChhhCCHHHHHHHHHHH
Confidence 999999996 69999996421 112 345677888888764 322 233679999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
|++++|++|||||||++||+++...+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 99999999999999999999999999999998643 7899999999998755 99999999999999999999976543
Q ss_pred c-HHHHH
Q 000702 1324 S-MFLKL 1329 (1343)
Q Consensus 1324 ~-~f~~l 1329 (1343)
. .++.+
T Consensus 229 ~~~~~~~ 235 (242)
T cd03295 229 NDFVAEF 235 (242)
T ss_pred ChHHHHH
Confidence 3 33444
No 168
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.7e-40 Score=373.39 Aligned_cols=211 Identities=30% Similarity=0.426 Sum_probs=183.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh---HHHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL---HDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l---~~LR~~ 1173 (1343)
|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999722 469999999999999999999999999999999999999999999999999987654 346889
Q ss_pred ceeecCCccccC-CchhhhcCCCC---------------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChh
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPLE---------------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVG 1237 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~~---------------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1237 (1343)
++|+||++.+|. .|+++|+.... ...++++.++++..++.+.... ...+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQ-----------RADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHH
Confidence 999999999886 59999996311 0113457778888887654432 23579999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecC
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~ 1314 (1343)
||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999865 99999999999999999
Q ss_pred hhHHh
Q 000702 1315 PGRLL 1319 (1343)
Q Consensus 1315 p~eLl 1319 (1343)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 169
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=353.68 Aligned_cols=216 Identities=27% Similarity=0.389 Sum_probs=182.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.+++++|+.+|+. ..||+|+||+|++||.|+||||||||||||++++.|+..|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4899999999986 4699999999999999999999999999999999999999999999999988443 45799
Q ss_pred eecCCccccCC-chhhhcCCCCCC-------CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLEEH-------SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~~~-------sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
||+|++.||.= |+++|+...-+. ..+...++|+.+||.+|-.+.|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999985 999999643211 23458889999999999888774 689999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeC--CEE---eeec--ChhH
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSD--GRV---AEFD--TPGR 1317 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~--G~i---ve~g--~p~e 1317 (1343)
|+.+|+||+||||.++||..|...+|+.+.+..+ ++||++|||+++... -+|||+||.+ |+| ++.+ .|.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 9999999999999999999999999999887654 589999999998754 5999999999 544 3333 333
Q ss_pred HhhcCCcHHHHHHHH
Q 000702 1318 LLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1318 Ll~~~~~~f~~l~~~ 1332 (1343)
...+..|..+.++
T Consensus 224 --~~~~~~f~~l~~~ 236 (248)
T COG1116 224 --IRGDPEFLELREE 236 (248)
T ss_pred --cccChHHHHHHHH
Confidence 2234566665543
No 170
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=372.75 Aligned_cols=224 Identities=31% Similarity=0.438 Sum_probs=193.1
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCCChHHH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTIGLHDL 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~l~~L 1170 (1343)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999975 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hhcceeecCCcccc-CCchhhhcCCCC---C------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1171 RSRLGIIPQDPNLF-EGTIRCNLDPLE---E------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF-~gTIr~NLdp~~---~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
|++|+|+||+|.+| ..|+++|+.... . ..++++.++++.+++.+.+. ..+|..+ .+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~~----~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAPA----GKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCCc----ccCCHHHHH
Confidence 99999999999755 579999996321 1 11346788999999865432 1234443 579999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|+|+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999999999998767899999999999986 49999999999999999999998
Q ss_pred hcCCcHHHH
Q 000702 1320 EDKSSMFLK 1328 (1343)
Q Consensus 1320 ~~~~~~f~~ 1328 (1343)
+++...+.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14247 234 TNPRHELTE 242 (250)
T ss_pred cCCccHHHH
Confidence 765444433
No 171
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-40 Score=375.22 Aligned_cols=222 Identities=24% Similarity=0.394 Sum_probs=191.6
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--C
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--I 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i 1165 (1343)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 4568999999999974 3699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCCC---CC--C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH--S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~--s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
+...+|++++++||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+.. .....+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 4567889999999999999999999996321 11 1 3456888999998664431 12233468999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecCh
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p 1315 (1343)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999865 899999999999999999
Q ss_pred hHHhhcCC
Q 000702 1316 GRLLEDKS 1323 (1343)
Q Consensus 1316 ~eLl~~~~ 1323 (1343)
+++..++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986543
No 172
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=374.84 Aligned_cols=222 Identities=24% Similarity=0.451 Sum_probs=190.5
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--C
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--I 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i 1165 (1343)
....|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 10 ~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 10 KNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 3457999999999975 359999999999999999999999999999999999987 589999999999863 4
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCCC---CC---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
+..++|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+.. .+|. ...+||+|||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~~----~~~~LS~G~~ 160 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKD---KLNE----SGYSLSGGQQ 160 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhh---hhCC----CcccCCHHHH
Confidence 5677889999999999999999999997432 11 13456778888887543321 1233 3468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeC-----------C
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSD-----------G 1307 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~-----------G 1307 (1343)
||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||||++|++ |
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999999999999987667899999999998865 999999996 6
Q ss_pred EEeeecChhHHhhcCC
Q 000702 1308 RVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1308 ~ive~g~p~eLl~~~~ 1323 (1343)
+++|.|+++++++++.
T Consensus 241 ~~~~~~~~~~~~~~~~ 256 (269)
T PRK14259 241 YLVEFNETKKIFNSPK 256 (269)
T ss_pred eEEEeCCHHHHHhCcC
Confidence 7999999999987553
No 173
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=354.93 Aligned_cols=190 Identities=35% Similarity=0.445 Sum_probs=161.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------eEEEEcc
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------TAAYVSQ 522 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------~i~~v~Q 522 (1343)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|+|+.+|++|+|.++| .++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 4789999998853 6899999999999999999999999999999999999999999999988 4799999
Q ss_pred ccccc-CccHHHHhccCCCCC-------HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 523 SAWIQ-SGNIEENILFGSPMD-------KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 523 ~~~l~-~~ti~~Ni~~g~~~~-------~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++-++ --||+||+.||.+.. .++.++.++..+|...-+. ....|||||||||||||||..+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~-----------~P~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDK-----------YPHQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhc-----------CccccChHHHHHHHHHHHHhcC
Confidence 97765 479999999997642 2345566666666554444 4468999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCcc-ccCCEEEEEeC--CeEE
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFL-PAADFILVLKE--GRII 654 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l-~~~d~i~~l~~--G~i~ 654 (1343)
|++|+|||||+|||+.|..++-+.+++.+. .++|+++|||+++.. --+|||++|.+ |+|.
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999999998888666555443 479999999999875 45999999998 4553
No 174
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=387.29 Aligned_cols=216 Identities=26% Similarity=0.432 Sum_probs=190.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+. .|++|+
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3899999999975 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred eecCCccccCC-chhhhcCCCC-------CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLE-------EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~-------~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
||||++.+|.. |+++|+.... ..+ ++++.++|+.+++.++..+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 9999997421 112 345778899999877655443 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+++|++|+|||||++||..+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998654 6899999999998765 99999999999999999999998
Q ss_pred cCCcHH
Q 000702 1321 DKSSMF 1326 (1343)
Q Consensus 1321 ~~~~~f 1326 (1343)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 776544
No 175
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=373.87 Aligned_cols=219 Identities=30% Similarity=0.440 Sum_probs=188.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecC--CCChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIS--TIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~--~i~l~ 1168 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HHhhcceeecCCccccCC-chhhhcCCC---CCC--C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1169 DLRSRLGIIPQDPNLFEG-TIRCNLDPL---EEH--S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~g-TIr~NLdp~---~~~--s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
.+|++++++||+|.+|.+ |+++|+... ... . ++++.++++..++.+.+.. .++ ....+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD---RLN----DYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh---hhc----cChhhCCHHH
Confidence 788999999999999976 999999632 111 1 2456788888887654322 122 3346899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
|||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987677999999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000702 1318 LLEDKS 1323 (1343)
Q Consensus 1318 Ll~~~~ 1323 (1343)
+.+++.
T Consensus 235 ~~~~~~ 240 (253)
T PRK14267 235 VFENPE 240 (253)
T ss_pred HHhCCC
Confidence 986543
No 176
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.1e-39 Score=370.72 Aligned_cols=219 Identities=24% Similarity=0.282 Sum_probs=194.7
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhc
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSR 1173 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~ 1173 (1343)
.+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 3569999999951 3599999999999999999999999999999999999999999999998 3
Q ss_pred ceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1174 LGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1174 i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
++|+||++.+|.+|+++|+.......+.++.++++.+++.+.+..+|.++++++.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998643444556778888899999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhcCCcHHHHHH
Q 000702 1254 ILVLDEATASVDTATDNLIQKI-IRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~-l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l~ 1330 (1343)
||||||||++||+++...+.+. ++...+++|||+|||+++.+..||+|++|++|+++++|+++++.+. ...|.+-+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHHH
Confidence 9999999999999999988765 4555567999999999999988999999999999999999999864 34454333
No 177
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-40 Score=375.74 Aligned_cols=215 Identities=28% Similarity=0.440 Sum_probs=189.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 59999999999744456999999999999999999999999999999999999999999999999998877788899999
Q ss_pred eecCCc--cccCCchhhhcCCC---CCCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDP--NLFEGTIRCNLDPL---EEHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp--~lF~gTIr~NLdp~---~~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|+||+| .++..|+++|+... ...+.+ .+.+++++.++.++..+.+ .+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----------QNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 45577999999642 122333 3567788888876654433 579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 4899999999999888999999999999999999998764
No 178
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=365.94 Aligned_cols=202 Identities=25% Similarity=0.399 Sum_probs=175.9
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998654 34678999
Q ss_pred ecCCccccC-CchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFE-GTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.++..+.+ .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999886 59999996321 111 345778888888876654433 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
+++|++|||||||++||+++...+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999998765 9999999999998865
No 179
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=378.24 Aligned_cols=214 Identities=29% Similarity=0.461 Sum_probs=186.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecC--CCChHHHhhc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIS--TIGLHDLRSR 1173 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~--~i~l~~LR~~ 1173 (1343)
-|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 49999999999633 45999999999999999999999999999999999999999999999999984 3445678999
Q ss_pred ceeecCCc--cccCCchhhhcCCC---CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHH
Q 000702 1174 LGIIPQDP--NLFEGTIRCNLDPL---EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSL 1244 (1343)
Q Consensus 1174 i~iVpQdp--~lF~gTIr~NLdp~---~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1244 (1343)
++|+||+| .+|+.|+++|+... ...+. +.+.++++.++|.++..+ ...+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDK-----------PTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhC-----------CcccCCHHHHHHHHH
Confidence 99999998 57889999999642 12232 346777888888654332 236899999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1245 GRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1245 ARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||||+.+|+||||||||++||+++...+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999988754 789999999999987 5999999999999999999999863
No 180
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.8e-40 Score=387.45 Aligned_cols=218 Identities=25% Similarity=0.420 Sum_probs=192.7
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCc--ceEEEcCeecCCCChHHHh
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPAC--GRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~--G~I~IdG~di~~i~l~~LR 1171 (1343)
.|.|+++||+++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|++.|++ |+|.+||.++...+.. +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 367999999999975 359999999999999999999999999999999999999999 9999999999876653 5
Q ss_pred hcceeecCCccccCC-chhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1172 SRLGIIPQDPNLFEG-TIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~g-TIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
++|++|+|++.+|.. |+++|+.+. ...+ ++.+.++++.++|.++..+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 689999999999976 999999632 1223 235778899999987766555 378999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK---DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987654 6899999999998765 9999999999999999999999
Q ss_pred hcCCcHH
Q 000702 1320 EDKSSMF 1326 (1343)
Q Consensus 1320 ~~~~~~f 1326 (1343)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8876655
No 181
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.5e-40 Score=382.47 Aligned_cols=225 Identities=25% Similarity=0.376 Sum_probs=190.7
Q ss_pred eEEEEEEEEEEcCC-----------CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC
Q 000702 1096 TIELIDLKVRYGEN-----------LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST 1164 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-----------~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~ 1164 (1343)
-|+++|++++|+.. ...+++||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---HhhcceeecCCc--ccc-CCchhhhcCC----C-CCCCH----HHHHHHHHHcCCch-HHhcccCCCCcccc
Q 000702 1165 IGLHD---LRSRLGIIPQDP--NLF-EGTIRCNLDP----L-EEHSD----REIWEALDKSQLGD-IVRGKDQKLETPVL 1228 (1343)
Q Consensus 1165 i~l~~---LR~~i~iVpQdp--~lF-~gTIr~NLdp----~-~~~sd----~ei~~aL~~~~L~~-~i~~lp~gLdt~v~ 1228 (1343)
++.++ +|++|+||||+| .+| ..||.+|+.. + ...+. +.+.++++.+++.+ ...+
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~---------- 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINR---------- 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcC----------
Confidence 87544 678999999999 477 4799999852 1 12332 34567788888843 2222
Q ss_pred cCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEe
Q 000702 1229 ENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLS 1305 (1343)
Q Consensus 1229 e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~ 1305 (1343)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||+
T Consensus 158 -~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 158 -YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred -CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 2357999999999999999999999999999999999999999999987643 7899999999999976 99999999
Q ss_pred CCEEeeecChhHHhhcCCcHHHH-HHH
Q 000702 1306 DGRVAEFDTPGRLLEDKSSMFLK-LVT 1331 (1343)
Q Consensus 1306 ~G~ive~g~p~eLl~~~~~~f~~-l~~ 1331 (1343)
+|+|+|.|+++++++++...|.+ ++.
T Consensus 237 ~G~ive~g~~~~i~~~~~~py~~~l~~ 263 (331)
T PRK15079 237 LGHAVELGTYDEVYHNPLHPYTKALMS 263 (331)
T ss_pred CCEEEEEcCHHHHHcCCCCHHHHHHHh
Confidence 99999999999999876555544 443
No 182
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=368.48 Aligned_cols=208 Identities=26% Similarity=0.372 Sum_probs=181.1
Q ss_pred eEEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---H
Q 000702 1096 TIELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---L 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---L 1170 (1343)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-hcceeecCCccccCC-chhhhcCC---CCCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1171 R-SRLGIIPQDPNLFEG-TIRCNLDP---LEEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1171 R-~~i~iVpQdp~lF~g-TIr~NLdp---~~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
| ++++|+||+|.+|.+ |+++|+.. ..... ++++.++++..++.+...+. ..+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHR-----------PSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHH
Confidence 3 679999999999976 99999863 11111 24577888888886554332 25799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEEEeCCEEeeecC
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~ 1314 (1343)
++||||++.+|+||||||||++||+++...+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999998863 4789999999999999999999999999998775
No 183
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-39 Score=368.33 Aligned_cols=235 Identities=38% Similarity=0.679 Sum_probs=202.5
Q ss_pred HHHHHhhcccccccccccccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcC
Q 000702 424 DRISGFLQEEELQEDATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGE 503 (1343)
Q Consensus 424 ~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~ 503 (1343)
+.+.+.|..+..+.+.. +.......++++|+++.+ +++|+|+||+|++||+++|+|+||||||||+++|+|.
T Consensus 15 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl 86 (282)
T cd03291 15 EGFGELLEKAKQENNDR---KHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGE 86 (282)
T ss_pred HHHHHHHhccccccccc---ccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 45566666554332221 122334579999999852 4699999999999999999999999999999999999
Q ss_pred ccCCCcEEEECCeEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 504 IPKISGEVRLCGTAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 504 ~~~~~G~i~~~g~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
++|++|+|.++|.++|++|++++++.|++||+.++....+.++.+.++++++.+.+..+|.+.++.+++++.+|||||||
T Consensus 87 ~~p~~G~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~q 166 (282)
T cd03291 87 LEPSEGKIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRA 166 (282)
T ss_pred CCCCCcEEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHH
Confidence 99999999999999999999999999999999998655555667778888888888899999999999999999999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|++||||++.+|+++||||||++||+.+.+.+++.++....+++|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 167 rv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 246 (282)
T cd03291 167 RISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQ 246 (282)
T ss_pred HHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999998877765555555689999999999998889999999999999999999987
Q ss_pred hcC
Q 000702 664 QAG 666 (1343)
Q Consensus 664 ~~~ 666 (1343)
...
T Consensus 247 ~~~ 249 (282)
T cd03291 247 SLR 249 (282)
T ss_pred hcc
Confidence 543
No 184
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-40 Score=377.25 Aligned_cols=217 Identities=26% Similarity=0.401 Sum_probs=187.2
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH----hhc
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL----RSR 1173 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L----R~~ 1173 (1343)
.++|++.+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888864 358999999999999999999999999999999999999999999999999988765543 467
Q ss_pred ceeecCCccccC-CchhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++|+||++.+|. .|+++|+... ... .++++.++++.+++.++....| .+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999985 6999999631 111 2345778899999877665544 36999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999987643 7899999999998865 9999999999999999999998766
Q ss_pred CcHHH
Q 000702 1323 SSMFL 1327 (1343)
Q Consensus 1323 ~~~f~ 1327 (1343)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 55444
No 185
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.7e-40 Score=389.43 Aligned_cols=220 Identities=27% Similarity=0.459 Sum_probs=194.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++...+|++|+
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999974 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCccc-cCCchhhhcCCCC-----------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1176 IIPQDPNL-FEGTIRCNLDPLE-----------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1176 iVpQdp~l-F~gTIr~NLdp~~-----------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
++||++.+ |+.|+++|+.... ....+.+.++++.+++.++..+. + .+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-------~----~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-------V----TSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-------h----hhCCHHHHHHHH
Confidence 99999987 6779999996421 11234588999999998765432 2 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||||+++|+||+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999865 47899999999999954 999999999999999999999863
Q ss_pred CCcHHHHHH
Q 000702 1322 KSSMFLKLV 1330 (1343)
Q Consensus 1322 ~~~~f~~l~ 1330 (1343)
..+.+++
T Consensus 230 --~~l~~~~ 236 (402)
T PRK09536 230 --DTLRAAF 236 (402)
T ss_pred --HHHHHHh
Confidence 3455554
No 186
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=4.8e-40 Score=386.68 Aligned_cols=217 Identities=24% Similarity=0.406 Sum_probs=192.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..++++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999974 3599999999999999999999999999999999999999999999999999887764 4689
Q ss_pred eeecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
++|+|++.+|.. |+++|+.+.- ..+ ++++.++++.+++.++..+.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999966 9999997421 122 235778899999988776665 368999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|+|++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998654 7899999999998765 99999999999999999999998876
Q ss_pred cHH
Q 000702 1324 SMF 1326 (1343)
Q Consensus 1324 ~~f 1326 (1343)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 555
No 187
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.9e-40 Score=367.04 Aligned_cols=211 Identities=27% Similarity=0.390 Sum_probs=182.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 789999999964 36999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred ecCCccc-cCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNL-FEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~l-F~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+ +..|+++|+.... ..+ ++++.+.++..++.+.. + ....+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~----~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERA-------D----DKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-------c----CChhhCCHHHHHHHHHHHHH
Confidence 9999987 4679999996431 122 23456677777765432 2 23357999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999865 37899999999999988999999999999999999999864
No 188
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=378.62 Aligned_cols=215 Identities=25% Similarity=0.328 Sum_probs=184.3
Q ss_pred eEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC--------
Q 000702 1096 TIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST-------- 1164 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~-------- 1164 (1343)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997542 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHHhhcceeecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCc-hHHhc
Q 000702 1165 ----------------IGLHDLRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLG-DIVRG 1218 (1343)
Q Consensus 1165 ----------------i~l~~LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~-~~i~~ 1218 (1343)
.+...+|++|+||||+| .+|..|+++||.+.. ..+ ++++.++++.++|. ++..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 13456789999999987 688889999997431 222 34567888888885 44332
Q ss_pred ccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-
Q 000702 1219 KDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI- 1296 (1343)
Q Consensus 1219 lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~- 1296 (1343)
...+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.
T Consensus 162 -----------~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 162 -----------SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred -----------ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 235799999999999999999999999999999999999999999998764 3789999999999875
Q ss_pred ccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1297 DSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1297 ~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
.||||++|++|++++.|+|+++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 4999999999999999999998864
No 189
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=389.11 Aligned_cols=216 Identities=24% Similarity=0.370 Sum_probs=189.6
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++|+
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999974 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred eecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
||||++.+|.. |+++|+.... ..+ ++++.++++..++.++..+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 9999997421 122 245788899999876655443 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|+++|++|||||||++||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999987643 7899999999998765 999999999999999999999987665
Q ss_pred HH
Q 000702 1325 MF 1326 (1343)
Q Consensus 1325 ~f 1326 (1343)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 54
No 190
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.7e-40 Score=365.58 Aligned_cols=212 Identities=25% Similarity=0.441 Sum_probs=178.9
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i~ 1175 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999974 359999999999999999999999999999999999999999999999999988876654 67799
Q ss_pred eecCCccccCC-chhhhcCCCCC-CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHh
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLEE-HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALL 1249 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~~-~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1249 (1343)
|+||++.+|.+ |+++|+..... .. .+++.++++..+ .++..+++ ...+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~~~~~~----~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLKERRKQ----LAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhhhhhhC----chhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964321 11 122334444431 11222333 34679999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1250 KQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1250 ~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++|++|||||||++||.++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998765 47899999999998766 99999999999999999988764
No 191
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.7e-40 Score=352.06 Aligned_cols=178 Identities=34% Similarity=0.552 Sum_probs=166.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999976434699999999999999999999999999999999999999999999999998776 5678899999
Q ss_pred ecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCEEeeec
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g 1313 (1343)
|||||++||..+.+.+.+.|++..+++|+|+++|+++.+..|||+++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999877789999999999999889999999999998865
No 192
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=380.03 Aligned_cols=226 Identities=25% Similarity=0.378 Sum_probs=190.1
Q ss_pred eEEEEEEEEEEcCC--------CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh
Q 000702 1096 TIELIDLKVRYGEN--------LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL 1167 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~--------~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l 1167 (1343)
.|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999998875
Q ss_pred H---HHhhcceeecCCcc--ccC-CchhhhcC-C---CCCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1168 H---DLRSRLGIIPQDPN--LFE-GTIRCNLD-P---LEEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1168 ~---~LR~~i~iVpQdp~--lF~-gTIr~NLd-p---~~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
. .+|++|++|||||. ++. -|+.+|+. + ....+ .+.+.++|+.++|.+. .++... ..
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~~p----~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDRYP----HM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcCCC----cc
Confidence 4 46789999999994 554 38888874 1 11112 2457888999998532 223322 57
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEe
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVA 1310 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv 1310 (1343)
||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ ++|+|+|||+++.+.. ||||+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987643 7899999999999975 9999999999999
Q ss_pred eecChhHHhhcCCcHHHH-HHH
Q 000702 1311 EFDTPGRLLEDKSSMFLK-LVT 1331 (1343)
Q Consensus 1311 e~g~p~eLl~~~~~~f~~-l~~ 1331 (1343)
|.|+++++++++..-|.+ |+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ll~ 256 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQALLS 256 (327)
T ss_pred EECCHHHHhcCCCCHHHHHHHH
Confidence 999999999876554544 444
No 193
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=372.83 Aligned_cols=221 Identities=24% Similarity=0.396 Sum_probs=189.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCCCC--hHH
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDISTIG--LHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i~--l~~ 1169 (1343)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 468999999964 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhhcceeecCCccccCCchhhhcCCC---CC------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1170 LRSRLGIIPQDPNLFEGTIRCNLDPL---EE------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~gTIr~NLdp~---~~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+.. .+...+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGD-------RLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhh-------HhhcChhhCCHHHHH
Confidence 78899999999999999999999632 11 123457788899888654321 223344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987778999999999999875 9999999999999999999998
Q ss_pred hcCCcHH
Q 000702 1320 EDKSSMF 1326 (1343)
Q Consensus 1320 ~~~~~~f 1326 (1343)
+++...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 7765544
No 194
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-37 Score=338.92 Aligned_cols=506 Identities=16% Similarity=0.145 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 126 ALAILKSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKETFPHEGYILAGIFFSAKLVETITTRQWYLGVDILGM 205 (1343)
Q Consensus 126 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~li~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 205 (1343)
+..++|.+++.++....+.+...+... .++-.+-+++.+.+........+.+++++..++.+. ........+|.
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~---is~lg~t~~gq 77 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSL---ISQLGLTTLGQ 77 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 456788899888877777666655443 333333344322221111111122222222222221 11223345677
Q ss_pred HHHHHHHHHHHHHHhcCCccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 206 HVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDIWMLPLQIILALAILYKNVGIASVATLIAT 285 (1343)
Q Consensus 206 ~ir~~L~~~i~~K~l~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~~l~~~~g~~~l~~~~~~ 285 (1343)
+.-..++..+-+|++.-+....++.+++.++..++.|+..+.-.+..+..+..+.+-++.++..|++..+..+.+.++++
T Consensus 78 ~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~i 157 (546)
T COG4615 78 HFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVWI 157 (546)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 77778888999999999999999999999999999999999866667777777777777788888888888888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHH--HHHHHHH-HHHHHHHHHHHHHHHHHHHH-
Q 000702 286 IISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWED--RYRIQLE-EMRGVEFRWLRKALYSQAFI- 361 (1343)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~--~~~~~i~-~~r~~e~~~~~~~~~~~~~~- 361 (1343)
++.+..+.+...+..+...+..+.-|+..+..+.++.|-|.++.+.-.. .+.+.+. ..++.+- ...+...+.
T Consensus 158 vv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~----~~~~~n~f~~ 233 (546)
T COG4615 158 VVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRH----HIIRANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHh----hhhhhhHHHH
Confidence 7777777777777777777888889999999999999999999876432 1222211 1121111 111112221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Q 000702 362 TFIFWSSPIFVAAVTFGTSILLG-AQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQEDAT 440 (1343)
Q Consensus 362 ~~~~~~~~~~~~~~~f~~~~~~~-~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~fl~~~e~~~~~~ 440 (1343)
....|...++.+++....|+... +--+...+.|+...+-.++.|+.++...++.+..|.++++||.++-..|+...-..
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~ 313 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCC
Confidence 11223333333344333333322 11223355555555566889999999999999999999999999866554322111
Q ss_pred cccCCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCeE---
Q 000702 441 IVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGTA--- 517 (1343)
Q Consensus 441 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i--- 517 (1343)
.+ +.+ +-..++++|+.|+|.+. .+-+.-||++|++||++-|+|.||||||||+++|.|++.|++|+|.+||+.
T Consensus 314 ~q-~~p-~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~ 389 (546)
T COG4615 314 PQ-AFP-DWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSA 389 (546)
T ss_pred CC-cCC-cccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCC
Confidence 11 111 12369999999998643 378899999999999999999999999999999999999999999999952
Q ss_pred ----------EEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 518 ----------AYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 518 ----------~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
+-|+-|-|+|+.++- +.. ..++.+++-++...+..-.+ +.+|--+ ...||-|||.|+|
T Consensus 390 e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~LqrLel~~kts-l~d~~fs-----~~kLStGQkKRlA 458 (546)
T COG4615 390 EQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQRLELAHKTS-LNDGRFS-----NLKLSTGQKKRLA 458 (546)
T ss_pred CCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----ccccccchHHHHH
Confidence 445556666654431 112 34555555555555543322 2222111 2469999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-hcCCcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMT-ALANKTVIFVTHQVEFLPAADFILVLKEGRIIQA 656 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~-~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~ 656 (1343)
+--|+..+.|||+|||--+--||+=.+..++..+-. ...|||++.|||+-.+...|||++.+++|++++.
T Consensus 459 ll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 459 LLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999877777765533 3369999999999999999999999999999864
No 195
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-40 Score=374.21 Aligned_cols=216 Identities=27% Similarity=0.438 Sum_probs=191.6
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCc---ceEEEcCeecCCCChHHHh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPAC---GRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~---G~I~IdG~di~~i~l~~LR 1171 (1343)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997544469999999999999999999999999999999999999988 8999999999887777889
Q ss_pred hcceeecCCc--cccCCchhhhcCCC---CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1172 SRLGIIPQDP--NLFEGTIRCNLDPL---EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1172 ~~i~iVpQdp--~lF~gTIr~NLdp~---~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
++++|+||+| .++..|+++|+.+. ...+. +++.++++.+++.++....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999999 46688999999742 12333 34778899999987665544 47999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhh
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
+|||||+.+|++|||||||++||..+...+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|++++++.
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988653 789999999999998899999999999999999999875
Q ss_pred c
Q 000702 1321 D 1321 (1343)
Q Consensus 1321 ~ 1321 (1343)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 196
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.7e-40 Score=365.58 Aligned_cols=202 Identities=30% Similarity=0.438 Sum_probs=175.3
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH----H
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD----L 1170 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~----L 1170 (1343)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997531 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hhcceeecCCccccCC-chhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1171 RSRLGIIPQDPNLFEG-TIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF~g-TIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+...+.+ .+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP-----------SELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh-----------hhcCHHHHHHH
Confidence 6789999999999986 999999642 111 1345778888888866544322 57999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEE
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRV 1309 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~i 1309 (1343)
+|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 197
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-40 Score=370.18 Aligned_cols=220 Identities=25% Similarity=0.404 Sum_probs=189.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcc---cCC--CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRL---IEP--ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl---~~~--~~G~I~IdG~di~~i--~l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999975 3599999999999999999999999999999999997 344 589999999999764 345
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC---CC-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL---EE-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|.+|+++|+... .. ..++++.++++.+++.+.+... ....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDK-------LKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhh-------hhCCcccCCHHHHH
Confidence 778899999999999999999999631 11 1234577888888886554321 22344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999865 9999999999999999999998
Q ss_pred hcCCc
Q 000702 1320 EDKSS 1324 (1343)
Q Consensus 1320 ~~~~~ 1324 (1343)
+++..
T Consensus 234 ~~~~~ 238 (250)
T PRK14245 234 TNPEK 238 (250)
T ss_pred cCCCC
Confidence 76543
No 198
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=371.16 Aligned_cols=220 Identities=26% Similarity=0.419 Sum_probs=191.0
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CCh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IGL 1167 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~l 1167 (1343)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999964 469999999999999999999999999999999999997 579999999999864 345
Q ss_pred HHHhhcceeecCCccccCCchhhhcCCC-C--C-C----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1168 HDLRSRLGIIPQDPNLFEGTIRCNLDPL-E--E-H----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~gTIr~NLdp~-~--~-~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
..+|+.++|+||+|.+|.+|+++|+... . . . .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6778999999999999999999999642 1 1 1 23457778889988755432 23344568999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||++||||++++|++|||||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998865 999999999999999999999
Q ss_pred hhcCC
Q 000702 1319 LEDKS 1323 (1343)
Q Consensus 1319 l~~~~ 1323 (1343)
.+.+.
T Consensus 250 ~~~~~ 254 (267)
T PRK14237 250 FTNPK 254 (267)
T ss_pred hcCCC
Confidence 86543
No 199
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=7.7e-40 Score=370.76 Aligned_cols=218 Identities=28% Similarity=0.413 Sum_probs=188.3
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC-------
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG------- 1166 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~------- 1166 (1343)
++.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999974 35999999999999999999999999999999999999999999999999986431
Q ss_pred ------hHHHhhcceeecCCccccCC-chhhhcCCC----CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCC
Q 000702 1167 ------LHDLRSRLGIIPQDPNLFEG-TIRCNLDPL----EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENG 1231 (1343)
Q Consensus 1167 ------l~~LR~~i~iVpQdp~lF~g-TIr~NLdp~----~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1231 (1343)
...+|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 34678899999999999975 999999631 111 1345778888888866531 1223
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEE
Q 000702 1232 DNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRV 1309 (1343)
Q Consensus 1232 ~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~i 1309 (1343)
..||||||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999998764 37999999999999986 999999999999
Q ss_pred eeecChhHHhhcCC
Q 000702 1310 AEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1310 ve~g~p~eLl~~~~ 1323 (1343)
++.|+++++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~ 244 (257)
T PRK10619 231 EEEGAPEQLFGNPQ 244 (257)
T ss_pred EEeCCHHHhhhCcc
Confidence 99999999986543
No 200
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.5e-40 Score=373.30 Aligned_cols=223 Identities=20% Similarity=0.342 Sum_probs=191.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHhh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR~ 1172 (1343)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5999999999964 3699999999999999999999999999999999999999999999999999876643 3577
Q ss_pred cceeecCCccccCC-chhhhcCCC----CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1173 RLGIIPQDPNLFEG-TIRCNLDPL----EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~g-TIr~NLdp~----~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
+++|+||++.+|.+ |+++|+... ...+. +.+.++++.+++.+.... .+ .+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~~----~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-------MP----SELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-------Ch----hhCCHHHHHHHH
Confidence 89999999999986 999999631 11222 346667888887654332 22 479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999999876 99999999999999999999987
Q ss_pred cCCcHHHHHHH
Q 000702 1321 DKSSMFLKLVT 1331 (1343)
Q Consensus 1321 ~~~~~f~~l~~ 1331 (1343)
++...++.++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 65555566654
No 201
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=370.49 Aligned_cols=223 Identities=24% Similarity=0.380 Sum_probs=189.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||+++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999974 369999999999999999999999999999999999997 479999999999864 3445
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---CC-----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH-----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~-----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|+.++++||+|.+|++|+++|+.... .. .++++.++++.+++++... ..++ ....+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK---DNLD----RNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH---HHhc----cChhhCCHHHHH
Confidence 6788999999999999999999997421 11 1245667788888753221 1223 234689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987777899999999999876 9999999999999999999998
Q ss_pred hcCCcHHH
Q 000702 1320 EDKSSMFL 1327 (1343)
Q Consensus 1320 ~~~~~~f~ 1327 (1343)
..+.-.|.
T Consensus 235 ~~~~~~~~ 242 (251)
T PRK14251 235 IAPKKQIT 242 (251)
T ss_pred hCCCCHHH
Confidence 65543343
No 202
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=373.81 Aligned_cols=215 Identities=25% Similarity=0.378 Sum_probs=190.1
Q ss_pred eEEEEEEEEEEcCC-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1096 TIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
-|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888889999
Q ss_pred eeecCCc--cccCCchhhhcCCC---CCCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDP--NLFEGTIRCNLDPL---EEHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp--~lF~gTIr~NLdp~---~~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+|+||+| .++..|+.+|+... ...+++ .+.++++.+++.++....| ..||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP-----------ARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 46788999999742 123333 3567888888876654322 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987754 7899999999999988999999999999999999998864
No 203
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=377.49 Aligned_cols=216 Identities=28% Similarity=0.400 Sum_probs=184.9
Q ss_pred eEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC----CChH
Q 000702 1096 TIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST----IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i~l~ 1168 (1343)
.|+++|++++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999997432 369999999999999999999999999999999999999999999999999863 3456
Q ss_pred HHhhcceeecCCc--cccCCchhhhcCCCC---CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1169 DLRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
..|++++|+||+| .+|+.|+++|+.... ..+. +.+.++++.++|.+.+. +. ...+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~------~~----~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL------AR----SPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh------hC----CcccCCHHHH
Confidence 7888999999998 688889999996321 1232 34567788888863221 22 2357999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988643 7899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 000702 1317 RLLED 1321 (1343)
Q Consensus 1317 eLl~~ 1321 (1343)
++.++
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 98754
No 204
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=371.06 Aligned_cols=222 Identities=26% Similarity=0.409 Sum_probs=189.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCCC--hH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTIG--LH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~--l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+ ..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999964 3599999999999999999999999999999999999985 7999999999986532 44
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
.+|+.++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++.+ ..+||||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKSP----ALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----hhhCCHHHHHH
Confidence 678899999999999999999999632 1122 234677888888754321 223333 36799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++|||||+++|+||||||||++||.++...+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+|+++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667999999999999866 99999999999999999999987
Q ss_pred cCCcHH
Q 000702 1321 DKSSMF 1326 (1343)
Q Consensus 1321 ~~~~~f 1326 (1343)
++...+
T Consensus 243 ~~~~~~ 248 (258)
T PRK14268 243 NPREKS 248 (258)
T ss_pred CCCCHH
Confidence 654433
No 205
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-40 Score=374.12 Aligned_cols=214 Identities=23% Similarity=0.379 Sum_probs=189.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
-++++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999643 35999999999999999999999999999999999999999999999999998877788899999
Q ss_pred eecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
++||+| .+|..|+++|+.... ..+ ++.+.++++.+++.+...+.| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 478889999996321 222 234788899999877655443 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999987653 789999999999985 5999999999999999999999863
No 206
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-40 Score=362.78 Aligned_cols=208 Identities=27% Similarity=0.381 Sum_probs=181.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999974 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred ecCCccccCC-chhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+|.+ |+++|+... ... .++++.++++..++.++....+ .+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999998875 999999531 111 2345788899999876554332 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
+.+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999987643 6899999999999876 999999999999999998875
No 207
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.5e-40 Score=369.48 Aligned_cols=214 Identities=26% Similarity=0.439 Sum_probs=186.6
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC----------
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG---------- 1166 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~---------- 1166 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999974 36999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHHhhcceeecCCccccC-CchhhhcCCC----CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1167 ---LHDLRSRLGIIPQDPNLFE-GTIRCNLDPL----EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1167 ---l~~LR~~i~iVpQdp~lF~-gTIr~NLdp~----~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+...+.| ..|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP-----------AQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh-----------hhc
Confidence 2457889999999999885 7999999631 111 2345778888888876654433 579
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999865 99999999999999
Q ss_pred ecChhHHhhcCC
Q 000702 1312 FDTPGRLLEDKS 1323 (1343)
Q Consensus 1312 ~g~p~eLl~~~~ 1323 (1343)
.|+++++.+.+.
T Consensus 228 ~g~~~~~~~~~~ 239 (252)
T TIGR03005 228 QGKPDEIFRQPK 239 (252)
T ss_pred eCCHHHHhcCCC
Confidence 999999987654
No 208
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=372.99 Aligned_cols=215 Identities=24% Similarity=0.420 Sum_probs=188.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999754446999999999999999999999999999999999999999999999999998888888999999
Q ss_pred eecCCcc--ccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDPN--LFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp~--lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|+||+|. ++..|+++|+.... ... ++++.++++..++.++... ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHH
Confidence 9999994 44568999985321 112 3456778888888665433 23579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998653 6899999999999888999999999999999999998764
No 209
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.3e-40 Score=359.41 Aligned_cols=198 Identities=24% Similarity=0.389 Sum_probs=174.1
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999752 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred cCCc--cccCCchhhhcCCCC---CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1178 PQDP--NLFEGTIRCNLDPLE---EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1178 pQdp--~lF~gTIr~NLdp~~---~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
||+| .+|..|+++|+.... ...++++.++++.+++.++..+.| ..||||||||++|||||+++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999997432 122357889999999987655444 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCcccccc-cCEEEEEeCCEEe
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTE-FKDCTVCTIAHRIPTVID-SDLVLVLSDGRVA 1310 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv 1310 (1343)
++|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999999999999999876 357899999999999875 9999999999985
No 210
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=5.7e-40 Score=362.89 Aligned_cols=205 Identities=26% Similarity=0.406 Sum_probs=178.4
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 78999999997532 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred eeecCCccccCC-chhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+++||+|.+|.+ |+++|+... ... .++++.++++..++.+...+ ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999986 999998532 111 23457788888888665443 23579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
|++++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998764 47899999999998865 9999999999998765
No 211
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.1e-40 Score=378.80 Aligned_cols=213 Identities=27% Similarity=0.437 Sum_probs=186.5
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|++|
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999974 46999999999999999999999999999999999999999999999999998754 4578999
Q ss_pred eeecCCccccC-CchhhhcCCCC---CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPLE---EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+|+||+|.+|. .|+++|+..+. ..++ +.+.++++.+++.+. .++++ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999999986 59999997432 1222 345567777777543 34455 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+.+|++|+|||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+|+++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999864 37899999999999976 999999999999999999999764
No 212
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=369.83 Aligned_cols=219 Identities=25% Similarity=0.381 Sum_probs=187.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC--C---CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE--P---ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~i--~l~ 1168 (1343)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999974 359999999999999999999999999999999999853 6 499999999999653 345
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC----CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL----EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|+.++|+||+|.+|+.|+++|+... ... .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999999631 111 23456678888887654432 123344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|++|||||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999998865 9999999999999999999998
Q ss_pred hcCC
Q 000702 1320 EDKS 1323 (1343)
Q Consensus 1320 ~~~~ 1323 (1343)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 7654
No 213
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=339.45 Aligned_cols=205 Identities=25% Similarity=0.409 Sum_probs=177.6
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCC-----cEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKIS-----GEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~-----G~i~~~g--------- 515 (1343)
..++++|+++.|. ++.+|+|||++|++++++|++|||||||||||+++.+..+... |+|.++|
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3689999999763 4689999999999999999999999999999999999988765 9999988
Q ss_pred ------eEEEEcccccccCccHHHHhccCCCC---C----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSPM---D----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~~---~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
+||.|+|.|--|..||+|||.+|... . ++..++.++.++|.+.... .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 37999999999999999999999542 1 2345566667777665432 34567889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||+||||||.-+|+|||||||||||||.+..+| ++++..+.++-|+|+|||+++...+ +|+...+-+|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999988877 6778777788999999999988765 89999999999999999998
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8754
No 214
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=369.30 Aligned_cols=221 Identities=24% Similarity=0.386 Sum_probs=188.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC--C---CcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE--P---ACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999974 359999999999999999999999999999999999987 3 58999999999864 3456
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---C-CCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---E-HSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|.+|+++|+.... . ..+ +++.++++..++.+.+.. .+ .....+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~l----~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD---RL----HTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---hh----hCCcccCCHHHHH
Confidence 7888999999999999999999996321 1 122 235667888888655422 12 2344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+|+++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987778899999999999865 9999999999999999999998
Q ss_pred hcCCcH
Q 000702 1320 EDKSSM 1325 (1343)
Q Consensus 1320 ~~~~~~ 1325 (1343)
+++...
T Consensus 243 ~~~~~~ 248 (259)
T PRK14274 243 SNPDDQ 248 (259)
T ss_pred hCCCCH
Confidence 765443
No 215
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-40 Score=361.39 Aligned_cols=202 Identities=29% Similarity=0.467 Sum_probs=178.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+.. ++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 5799999999643 6999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred ecCCccccCC-chhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+... ...+ ++++.++++..++.++.. +.+ .+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-------KKI----GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-------Cch----hhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1111 345778899998876543 222 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987777999999999999865 9999999999998865
No 216
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-40 Score=369.22 Aligned_cols=224 Identities=25% Similarity=0.409 Sum_probs=191.1
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999974 3699999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC----CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL----EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++++||+|.+|..|+++|+... ... .++++.++++.+++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999732 111 23346778888888654422 123345689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987778999999999998765 9999999999999999999998
Q ss_pred hcCCcHHHH
Q 000702 1320 EDKSSMFLK 1328 (1343)
Q Consensus 1320 ~~~~~~f~~ 1328 (1343)
+++...|.+
T Consensus 234 ~~~~~~~~~ 242 (250)
T PRK14262 234 ERPKNKLTE 242 (250)
T ss_pred hCCCChHHH
Confidence 765444443
No 217
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=373.37 Aligned_cols=215 Identities=24% Similarity=0.391 Sum_probs=189.5
Q ss_pred eEEEEEEEEEEcCC----CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC-hHHH
Q 000702 1096 TIELIDLKVRYGEN----LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG-LHDL 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-l~~L 1170 (1343)
-|+++|++++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999742 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hhcceeecCCcc--ccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1171 RSRLGIIPQDPN--LFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1171 R~~i~iVpQdp~--lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
|++++|+||+|. +|..|+.+|+.... ..+ ++++.++++.++|.++..+.| .+||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67778999996431 112 355788899999987765544 4799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+..||||++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999764 378999999999999889999999999999999999998
Q ss_pred hc
Q 000702 1320 ED 1321 (1343)
Q Consensus 1320 ~~ 1321 (1343)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 218
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=367.29 Aligned_cols=222 Identities=23% Similarity=0.418 Sum_probs=190.0
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC--C---CcceEEEcCeecCCC--C
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE--P---ACGRIIIDNIDISTI--G 1166 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~i--~ 1166 (1343)
+|.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 367999999999974 369999999999999999999999999999999999986 3 689999999999754 3
Q ss_pred hHHHhhcceeecCCccccC-CchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChh
Q 000702 1167 LHDLRSRLGIIPQDPNLFE-GTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVG 1237 (1343)
Q Consensus 1167 l~~LR~~i~iVpQdp~lF~-gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1237 (1343)
...+|++++++||++.+|. .|+++|+... ...+ ++++.++++.+++.+.+... ......+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4567889999999999998 5999999631 1111 24467788888886544321 12234689999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
||||++||||++++|++|||||||++||..+...+.+.|++..++.|||++||+++.+.. ||||++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred HHhhcCCc
Q 000702 1317 RLLEDKSS 1324 (1343)
Q Consensus 1317 eLl~~~~~ 1324 (1343)
++...+.-
T Consensus 233 ~~~~~~~~ 240 (252)
T PRK14256 233 KIFTTPEK 240 (252)
T ss_pred HHHhCCCc
Confidence 99876543
No 219
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=371.94 Aligned_cols=213 Identities=27% Similarity=0.417 Sum_probs=186.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC-hHHHhhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG-LHDLRSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~-l~~LR~~i~ 1175 (1343)
++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999998765 467888999
Q ss_pred eecCCcc--ccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDPN--LFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp~--lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
++||+|. ++..|+++|+.... ..+ ++++.++++..++.++....+ ..||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP-----------KTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 9999985 56789999996432 122 345677888888876544332 579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+++|+||||||||++||+.+...+.+.|++.. +++|+|++||+++.+..||||++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998754 47899999999999988999999999999999999998754
No 220
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=367.45 Aligned_cols=222 Identities=27% Similarity=0.412 Sum_probs=189.7
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--CCh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--IGL 1167 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~l 1167 (1343)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 56999999999974 3599999999999999999999999999999999999863 69999999999875 355
Q ss_pred HHHhhcceeecCCccccCCchhhhcCCCC---CC-----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1168 HDLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH-----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~-----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
..+|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+.. .......+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67889999999999999999999996421 11 23456777888887654421 12233468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668899999999998866 999999999999999999999
Q ss_pred hhcCCcH
Q 000702 1319 LEDKSSM 1325 (1343)
Q Consensus 1319 l~~~~~~ 1325 (1343)
..++...
T Consensus 233 ~~~~~~~ 239 (250)
T PRK14240 233 FTNPKDK 239 (250)
T ss_pred HhCCCCh
Confidence 8654433
No 221
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=370.28 Aligned_cols=219 Identities=25% Similarity=0.438 Sum_probs=187.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999974 369999999999999999999999999999999999865 689999999999865 3445
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC----CC----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL----EE----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++..++.+.+.. .......+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD-------RLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998632 11 113456778888887543321 122334689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999998765 9999999999999999999998
Q ss_pred hcCC
Q 000702 1320 EDKS 1323 (1343)
Q Consensus 1320 ~~~~ 1323 (1343)
.++.
T Consensus 252 ~~~~ 255 (268)
T PRK14248 252 TSPK 255 (268)
T ss_pred hCCC
Confidence 7543
No 222
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-39 Score=366.62 Aligned_cols=212 Identities=23% Similarity=0.347 Sum_probs=185.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i 1174 (1343)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+.+
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 369999999999999999999999999999999999999999999999999988776654 5579
Q ss_pred eeecCCccccCC-chhhhcCCCCC------------C---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE------------H---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~------------~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
+++||++.+|.+ |+++|+..... . .++++.++++..++.+... ....+|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEAD-----------RLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHH
Confidence 999999999987 99999964211 0 2345677788877754432 2235799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
|||++||||++++|++|+|||||++||+++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999987677899999999999975 99999999999999999999
Q ss_pred Hhh
Q 000702 1318 LLE 1320 (1343)
Q Consensus 1318 Ll~ 1320 (1343)
+..
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 875
No 223
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.8e-39 Score=368.97 Aligned_cols=226 Identities=26% Similarity=0.353 Sum_probs=188.8
Q ss_pred eEEEEEEEEEEcCC-------CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH
Q 000702 1096 TIELIDLKVRYGEN-------LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~ 1168 (1343)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 34699999999999999999999999999999999999999999999999999887654
Q ss_pred H---HhhcceeecCCcc--cc-CCchhhhcCC----CCC----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1169 D---LRSRLGIIPQDPN--LF-EGTIRCNLDP----LEE----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1169 ~---LR~~i~iVpQdp~--lF-~gTIr~NLdp----~~~----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
. +|++++|+||+|. ++ ..|+++|+.. ... ..++++.++++..++.+.. ++ ....+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~~----~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED------AD----KLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh------hh----CChhhC
Confidence 3 6788999999983 44 3699999842 111 1234577788888875221 12 233579
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|||||||++|||||+++|++|||||||++||+++...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999987653 7899999999999975 99999999999999
Q ss_pred ecChhHHhhcCCcHHHHHHH
Q 000702 1312 FDTPGRLLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~~f~~l~~ 1331 (1343)
.|++++++..++...+++..
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~ 251 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNLQS 251 (265)
T ss_pred ECCHHHHcCCCCHHHHHHHH
Confidence 99999998754444555543
No 224
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=369.06 Aligned_cols=221 Identities=26% Similarity=0.388 Sum_probs=189.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--CCh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--IGL 1167 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~l 1167 (1343)
+.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999974 3599999999999999999999999999999999999985 48999999999864 345
Q ss_pred HHHhhcceeecCCccccCCchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1168 HDLRSRLGIIPQDPNLFEGTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
..+|++++++||+|.+|..|+++|+... .... ++.+.++++.+++.+.+... ++ ..+..||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~~----~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---LN----KSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---hc----CCcccCCHHHH
Confidence 6788899999999999999999999632 1112 23466788888887654322 22 34468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe-----CCEEeeec
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS-----DGRVAEFD 1313 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~-----~G~ive~g 1313 (1343)
||+||||||+++|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.. |||+++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987777899999999999876 99999998 59999999
Q ss_pred ChhHHhhcCCc
Q 000702 1314 TPGRLLEDKSS 1324 (1343)
Q Consensus 1314 ~p~eLl~~~~~ 1324 (1343)
+++++.+++..
T Consensus 237 ~~~~~~~~~~~ 247 (259)
T PRK14260 237 VTTQIFSNPLD 247 (259)
T ss_pred CHHHHhcCCCC
Confidence 99999876544
No 225
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-40 Score=371.63 Aligned_cols=212 Identities=26% Similarity=0.390 Sum_probs=188.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred eecCCccccCC-chhhhcCCCC-----------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLE-----------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~-----------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
|+||++.++.+ |+++|+.... ...++++.++++.+++.++....+ .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999996321 112346888999999876554433 369999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
||||++.+|+||||||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999999999999999987642 7899999999999865 99999999999999999999874
No 226
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=8e-40 Score=358.94 Aligned_cols=202 Identities=27% Similarity=0.408 Sum_probs=178.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999964 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred ecCCcccc-CCchhhhcCCC---CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1177 IPQDPNLF-EGTIRCNLDPL---EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1177 VpQdp~lF-~gTIr~NLdp~---~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
+||++.+| ..|+++|+... ...+++++.++++..++.+...+. ...||||||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 99999888 46999999642 123566788899999997665432 2479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998754 47899999999999865 9999999999998865
No 227
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=367.44 Aligned_cols=223 Identities=23% Similarity=0.394 Sum_probs=192.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i--~l~ 1168 (1343)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.+++.. +..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999974 359999999999999999999999999999999999875 3899999999998753 456
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC-C--CC-C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL-E--EH-S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~-~--~~-s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|.+|+++|+... . .. + .+.+.++++.+++.+++... ++ ..+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~~----~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---LD----KSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---Hh----CCcccCCHHHHH
Confidence 789999999999999999999999732 1 11 1 23467788999987765432 23 345689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|+|||||++++|+||+|||||++||..+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999998876 8999999999999999999998
Q ss_pred hcCCcHHH
Q 000702 1320 EDKSSMFL 1327 (1343)
Q Consensus 1320 ~~~~~~f~ 1327 (1343)
..+.+.+.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14266 234 INPKDKRT 241 (250)
T ss_pred hCCCChHH
Confidence 76665553
No 228
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=365.95 Aligned_cols=215 Identities=26% Similarity=0.363 Sum_probs=184.1
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC------CChHH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST------IGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~------i~l~~ 1169 (1343)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 369999999999999999999999999999999999999999999999998741 23456
Q ss_pred HhhcceeecCCccccCC-chhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1170 LRSRLGIIPQDPNLFEG-TIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~g-TIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
+|++++|+||+|.+|.+ |+++|+..+ .... .+++.++++..++.++....+ .+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP-----------LHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHH
Confidence 78899999999999975 999999621 1112 234666777877766554433 479999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
|++||||++++|++|||||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999998764 37899999999999865 999999999999999999998
Q ss_pred hhcCC
Q 000702 1319 LEDKS 1323 (1343)
Q Consensus 1319 l~~~~ 1323 (1343)
.+.+.
T Consensus 229 ~~~~~ 233 (242)
T PRK11124 229 TQPQT 233 (242)
T ss_pred cCccc
Confidence 65433
No 229
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=377.65 Aligned_cols=228 Identities=21% Similarity=0.316 Sum_probs=188.0
Q ss_pred eEEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC----CCcceEEEcCeecCCCChHH
Q 000702 1096 TIELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE----PACGRIIIDNIDISTIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~----~~~G~I~IdG~di~~i~l~~ 1169 (1343)
.++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|+|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999997532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhh----cceeecCCcc--ccC-Cchhhh----cCCCCCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1170 LRS----RLGIIPQDPN--LFE-GTIRCN----LDPLEEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1170 LR~----~i~iVpQdp~--lF~-gTIr~N----Ldp~~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
+|+ .|++|||+|. ++. -|+.+| +...... ..+++.++|++++|.+.... ......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 654 6999999995 332 255544 3322111 23457889999999653211 12234579
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive 1311 (1343)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 789999999999985 599999999999999
Q ss_pred ecChhHHhhcCCcHHH-HHHH
Q 000702 1312 FDTPGRLLEDKSSMFL-KLVT 1331 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~~f~-~l~~ 1331 (1343)
.|+++++++++...|. .++.
T Consensus 235 ~g~~~~~~~~p~hpyt~~ll~ 255 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQALLR 255 (326)
T ss_pred ECCHHHHhhCCCChHHHHHHH
Confidence 9999999987655554 4443
No 230
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-40 Score=344.29 Aligned_cols=203 Identities=32% Similarity=0.442 Sum_probs=170.5
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~ 518 (1343)
|+|+|+|+.|. ++.+++|+||+|++||+++++|||||||||+|+.|.++++|++|+|.++| +||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999985 57899999999999999999999999999999999999999999999998 489
Q ss_pred EEccccccc-CccHHHHhccCCC---CCHHHHH----HHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHH
Q 000702 519 YVSQSAWIQ-SGNIEENILFGSP---MDKAKYK----KVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARA 590 (1343)
Q Consensus 519 ~v~Q~~~l~-~~ti~~Ni~~g~~---~~~~~~~----~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARa 590 (1343)
||-|+.-+| +.||.|||.+-.. +++++.+ +.++..+|+.. .........|||||+|||.+|||
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~---------~~~~RyP~eLSGGQQQRVGv~RA 149 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPS---------EYADRYPHELSGGQQQRVGVARA 149 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHH---------HHhhcCchhcCcchhhHHHHHHH
Confidence 999998776 7899999988643 5555444 34444444321 11234567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 591 LYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEF-LPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 591 l~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
|..+|+|+++||||+||||-+.+++-+++..... -++|+|+|||+++. ++.+|||.+|++|+++..+++++++.+.
T Consensus 150 LAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 150 LAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 9999999999999999999998887555432222 28999999999987 5669999999999999999999998763
No 231
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.6e-39 Score=364.70 Aligned_cols=213 Identities=26% Similarity=0.392 Sum_probs=184.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC--hHHHhhcc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG--LHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--l~~LR~~i 1174 (1343)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 789999999974 36999999999999999999999999999999999999999999999999998643 35678899
Q ss_pred eeecCCccccC-CchhhhcCCCC----CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPLE----EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~~----~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+|+||++.+|. .|+++|+.... ..+ ++++.++++..++.+..... ...||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHY-----------PSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcC-----------hhhcCHHHHHHHHHH
Confidence 99999999886 59999996421 111 23456777777776554332 257999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
||++++|++|+|||||++||.++...+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|++.++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998764 37899999999999865 9999999999999999999997644
No 232
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.5e-39 Score=360.47 Aligned_cols=203 Identities=28% Similarity=0.421 Sum_probs=175.3
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hh
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR 1171 (1343)
|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..++..+ +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996432 36999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -hcceeecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1172 -SRLGIIPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1172 -~~i~iVpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
++++|+||+|.+|. .|+++|+... .... .+++.++++..++.+...+. ...||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHR-----------PSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHH
Confidence 67999999999996 5999999641 1121 23467778888776544332 257999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccccCEEEEEeCCEEe
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVIDSDLVLVLSDGRVA 1310 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~iv 1310 (1343)
+||||++++|+||||||||++||+++...+.+.|++.. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998764 368999999999999889999999999986
No 233
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.2e-39 Score=365.93 Aligned_cols=222 Identities=27% Similarity=0.404 Sum_probs=187.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC--------h
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG--------L 1167 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--------l 1167 (1343)
-++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999974 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhhcceeecCCccccC-CchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1168 HDLRSRLGIIPQDPNLFE-GTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~-gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
..+|++++|+||+|.+|. .|+++|+... .... .+.+.++++..++.+... ....+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKET-----------SYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-----------CChhhCChHH
Confidence 467889999999999886 6999999631 1122 234566777777754322 2336899999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999999999999987653 7899999999999866 9999999999999999999
Q ss_pred HHhhcCC-cHHHHHH
Q 000702 1317 RLLEDKS-SMFLKLV 1330 (1343)
Q Consensus 1317 eLl~~~~-~~f~~l~ 1330 (1343)
++.+.+. ...+.++
T Consensus 230 ~~~~~~~~~~~~~~~ 244 (250)
T PRK11264 230 ALFADPQQPRTRQFL 244 (250)
T ss_pred HHhcCCCCHHHHHHH
Confidence 9986543 2334444
No 234
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.9e-40 Score=364.60 Aligned_cols=211 Identities=27% Similarity=0.496 Sum_probs=181.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i~ 1175 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988776553 56799
Q ss_pred eecCCccccCC-chhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
|+||++.+|.+ |+++|+... .... ++++.+.++..++.+... ....+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRK-----------SKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999632 1112 223456677776654332 2335799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++.+|++|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998764 37899999999987765 99999999999999999999874
No 235
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.8e-40 Score=360.41 Aligned_cols=200 Identities=29% Similarity=0.462 Sum_probs=174.3
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cCCcc--ccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1178 PQDPN--LFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1178 pQdp~--lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
||+|. ++..|+++|+.... ..+ ++++.++++..++.+...+.+ .+||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP-----------FTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc-----------ccCCHHHHHHHHHHHHH
Confidence 99983 67889999996421 122 234667888888866544332 57999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCE
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGR 1308 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1308 (1343)
+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999987653 7899999999999987 99999999985
No 236
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=365.47 Aligned_cols=218 Identities=26% Similarity=0.421 Sum_probs=188.6
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC-----cceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA-----CGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~i--~l~ 1168 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999974 35999999999999999999999999999999999999987 69999999998653 455
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---C-CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---E-HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|+.++|+||+|.+|..|+++|+.... . .. ++.+.++++.+++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7889999999999999999999997421 1 11 2345667777887655432 233455789999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++|||||+.+|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999877 7999999999999999999997
Q ss_pred hcC
Q 000702 1320 EDK 1322 (1343)
Q Consensus 1320 ~~~ 1322 (1343)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 654
No 237
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=384.81 Aligned_cols=220 Identities=28% Similarity=0.419 Sum_probs=188.9
Q ss_pred eEEEEEEEEEEcCCC----------------------CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcc
Q 000702 1096 TIELIDLKVRYGENL----------------------PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACG 1153 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~----------------------~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G 1153 (1343)
.|+++||+..|++.. ..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 467777777775532 1379999999999999999999999999999999999999999
Q ss_pred eEEEcCeecCCCChHHH----hhcceeecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccC
Q 000702 1154 RIIIDNIDISTIGLHDL----RSRLGIIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQ 1221 (1343)
Q Consensus 1154 ~I~IdG~di~~i~l~~L----R~~i~iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~ 1221 (1343)
+|.+||.|+.+.+...+ |++++|+||++.+|.. |+++|+.... ..+ ++++.++++.++|.++..+.|
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-
Confidence 99999999998876654 3579999999999974 9999996321 122 345778899999987765544
Q ss_pred CCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-c
Q 000702 1222 KLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-S 1298 (1343)
Q Consensus 1222 gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~ 1298 (1343)
.+||||||||++|||||+.+|+||||||||++||+.+.+.+++.|++.. .++|+|+|||+++.+.. |
T Consensus 163 ----------~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~ 232 (400)
T PRK10070 163 ----------DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIG 232 (400)
T ss_pred ----------ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhC
Confidence 4799999999999999999999999999999999999999999998764 37899999999998865 9
Q ss_pred CEEEEEeCCEEeeecChhHHhhcCCcHH
Q 000702 1299 DLVLVLSDGRVAEFDTPGRLLEDKSSMF 1326 (1343)
Q Consensus 1299 DrIlvl~~G~ive~g~p~eLl~~~~~~f 1326 (1343)
|||++|++|++++.|+|++++.++...|
T Consensus 233 Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 233 DRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 9999999999999999999987665433
No 238
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=369.17 Aligned_cols=222 Identities=26% Similarity=0.420 Sum_probs=191.7
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--C
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--I 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i 1165 (1343)
..+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3699999999999999999999999999999999999884 89999999999875 3
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCC---CC-CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChh
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPL---EE-HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVG 1237 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~-~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgG 1237 (1343)
+...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+|
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHH
Confidence 456788999999999999999999999632 11 11 2447788888888655432 223445789999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
||||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999988778999999999999865 9999999999999999999
Q ss_pred HHhhcCC
Q 000702 1317 RLLEDKS 1323 (1343)
Q Consensus 1317 eLl~~~~ 1323 (1343)
++.+++.
T Consensus 253 ~~~~~~~ 259 (272)
T PRK14236 253 TLFTSPA 259 (272)
T ss_pred HHhcCCC
Confidence 9986543
No 239
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=368.18 Aligned_cols=223 Identities=24% Similarity=0.423 Sum_probs=189.0
Q ss_pred CCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--
Q 000702 1092 PENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST-- 1164 (1343)
Q Consensus 1092 p~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~-- 1164 (1343)
|....++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 20 ~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 97 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKS 97 (271)
T ss_pred CCceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccc
Confidence 33446999999999974 359999999999999999999999999999999999987 699999999999853
Q ss_pred CChHHHhhcceeecCCccccCCchhhhcCCC---CCCC-----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1165 IGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL---EEHS-----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1165 i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~~s-----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
.+...+|++++|+||+|.+|..|+++|+... ...+ ++.+.++++..++.+.+. ......+.+|||
T Consensus 98 ~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSg 170 (271)
T PRK14238 98 YSVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSG 170 (271)
T ss_pred ccHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCH
Confidence 3456778899999999999999999999631 1222 223456666666543322 222344568999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecCh
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p 1315 (1343)
|||||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||||++|++|++++.|++
T Consensus 171 Ge~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~ 250 (271)
T PRK14238 171 GQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDT 250 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778999999999999865 999999999999999999
Q ss_pred hHHhhcCC
Q 000702 1316 GRLLEDKS 1323 (1343)
Q Consensus 1316 ~eLl~~~~ 1323 (1343)
+++..++.
T Consensus 251 ~~~~~~~~ 258 (271)
T PRK14238 251 DKIFSNPS 258 (271)
T ss_pred HHHHcCCC
Confidence 99987654
No 240
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=383.27 Aligned_cols=217 Identities=21% Similarity=0.392 Sum_probs=190.6
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 359999999999999999999999999999999999999999999999999987764 46789
Q ss_pred eeecCCccccCC-chhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+|+||++.+|.. |+++|+.+. ...+ .+++.++++..++.++..+.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999742 1222 245678888899877655544 468999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++..++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988877654 26899999999998755 99999999999999999999998877
Q ss_pred cHH
Q 000702 1324 SMF 1326 (1343)
Q Consensus 1324 ~~f 1326 (1343)
..|
T Consensus 243 ~~~ 245 (377)
T PRK11607 243 TRY 245 (377)
T ss_pred cHH
Confidence 655
No 241
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=369.68 Aligned_cols=221 Identities=25% Similarity=0.442 Sum_probs=189.7
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCCC--C
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDISTI--G 1166 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i--~ 1166 (1343)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++... +
T Consensus 37 ~~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 37 ETVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 346999999999975 359999999999999999999999999999999999997 6899999999998653 4
Q ss_pred hHHHhhcceeecCCccccCCchhhhcCCC------CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1167 LHDLRSRLGIIPQDPNLFEGTIRCNLDPL------EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1167 l~~LR~~i~iVpQdp~lF~gTIr~NLdp~------~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
...+|++++|+||++.+|.+|+++|+... ....++++.++++..++.+.+... ......+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQ-------LDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHH-------HhCCcccCCHHHHH
Confidence 56778899999999999999999999632 111245688889998886544321 22334689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEE-EEeCCEEeeecChhHH
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVL-VLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIl-vl~~G~ive~g~p~eL 1318 (1343)
|++|||||+++|+||||||||++||.++.+.+.+.|++..+++|+|+++|+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999988777899999999999876 99975 5799999999999999
Q ss_pred hhcCC
Q 000702 1319 LEDKS 1323 (1343)
Q Consensus 1319 l~~~~ 1323 (1343)
.+++.
T Consensus 268 ~~~~~ 272 (285)
T PRK14254 268 FENPE 272 (285)
T ss_pred HhCcC
Confidence 86543
No 242
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=368.04 Aligned_cols=211 Identities=26% Similarity=0.447 Sum_probs=187.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..++...+++.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999974 369999999999999999999999999999999999999999999999999988888888889999
Q ss_pred ecCCccccCC-chhhhcCCCC--------C---CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE--------E---HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSL 1244 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~--------~---~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1244 (1343)
+||++.+|.+ |+++|++... . ..++++.++++.+++.+..... ...||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----------LTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----------cccCCHHHHHHHHH
Confidence 9999998877 9999997421 1 1234577888888886654332 25799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1245 GRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1245 ARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998764 37899999999999865 99999999999999999999875
No 243
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-39 Score=366.75 Aligned_cols=219 Identities=23% Similarity=0.399 Sum_probs=188.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~--i~l~ 1168 (1343)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999974 369999999999999999999999999999999999986 379999999999853 4556
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---CC---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
.+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ....+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7888999999999999899999997421 11 234566778888886655321 2334568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe---------CCEEeee
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS---------DGRVAEF 1312 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~---------~G~ive~ 1312 (1343)
+|||||+++|+||||||||++||+++...+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999987777899999999998865 99999998 8999999
Q ss_pred cChhHHhhcCC
Q 000702 1313 DTPGRLLEDKS 1323 (1343)
Q Consensus 1313 g~p~eLl~~~~ 1323 (1343)
|+++++.+++.
T Consensus 241 ~~~~~~~~~~~ 251 (264)
T PRK14243 241 DRTEKIFNSPQ 251 (264)
T ss_pred CCHHHHHhCCC
Confidence 99999987654
No 244
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=350.19 Aligned_cols=199 Identities=34% Similarity=0.518 Sum_probs=169.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------eEEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG----------TAAYV 520 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g----------~i~~v 520 (1343)
.|+++|++|+|.. . ++|+||||++++|++++|+||||||||||+|+|+|+++|.+|+|.+.| +||||
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYV 80 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYV 80 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEc
Confidence 5899999999853 2 699999999999999999999999999999999999999999999876 49999
Q ss_pred ccc---ccccCccHHHHhccCCCC-----------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 521 SQS---AWIQSGNIEENILFGSPM-----------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 521 ~Q~---~~l~~~ti~~Ni~~g~~~-----------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
||. .|-|..||+|-+.+|... |.++.+++++..++.+.. ......|||||+|||-
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----------~r~i~~LSGGQ~QRV~ 149 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----------DRQIGELSGGQKQRVL 149 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----------CCcccccCcHHHHHHH
Confidence 996 577999999999998431 235666777777665322 2445669999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|||||.++|++|+|||||+++|+.++..+++- ++.+ .+|+||++|||+++.+. .+|+|+.|. +++...|++++...
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 99999999999999999999999998888764 5444 35999999999999875 599999985 57788899998865
Q ss_pred c
Q 000702 665 A 665 (1343)
Q Consensus 665 ~ 665 (1343)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 3
No 245
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3e-39 Score=353.12 Aligned_cols=201 Identities=58% Similarity=0.956 Sum_probs=182.3
Q ss_pred EEEEeeEEEecCCCC--CCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCeEEEEcccccccCc
Q 000702 452 IQIENAEFCWYPSSS--RPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGTAAYVSQSAWIQSG 529 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~--~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~~v~Q~~~l~~~ 529 (1343)
++++|++++|.+... +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999854211 379999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000702 530 NIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDA 609 (1343)
Q Consensus 530 ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~ 609 (1343)
|++||+.++..+++++..++.+.+++.+.+..+|.|++|.+++++.+||||||||++||||++.+|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999877766677788888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-cCCcEEEEEecCCCccccCCEEEEEeCCe
Q 000702 610 HTGSELFKEYIMTA-LANKTVIFVTHQVEFLPAADFILVLKEGR 652 (1343)
Q Consensus 610 ~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~~d~i~~l~~G~ 652 (1343)
+..+.+++.++... .+++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99888877655544 34799999999999887899999999985
No 246
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.6e-40 Score=359.78 Aligned_cols=202 Identities=23% Similarity=0.403 Sum_probs=176.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999975 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred ecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+|. .|+++|+... .... ++++.++++..++.+.....+ .+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999985 5999999642 1122 234667788888876654433 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
+++|++|+|||||++||+++...+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999998764 37899999999998876 9999999999999886
No 247
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=364.44 Aligned_cols=218 Identities=25% Similarity=0.386 Sum_probs=188.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~l~ 1168 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999974 3599999999999999999999999999999999999875 799999999999653 345
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---CC-C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH-S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~-s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||++.+|..|+++|+.... .. + .+++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6788999999999999999999997321 11 1 23467788888886543321 22344689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|+||||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987777899999999999866 9999999999999999999998
Q ss_pred hcC
Q 000702 1320 EDK 1322 (1343)
Q Consensus 1320 ~~~ 1322 (1343)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 654
No 248
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.7e-40 Score=360.01 Aligned_cols=200 Identities=26% Similarity=0.399 Sum_probs=175.6
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR~~ 1173 (1343)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred ceeecCCccccC-CchhhhcCCC----C---CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPL----E---EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~----~---~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++|+||+|.+|. .|+++|+... . ...+++++++++..++.+.....| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999996 5999998642 1 112456788999999876654433 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCE
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGR 1308 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1308 (1343)
|||+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999886 99999999985
No 249
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.4e-39 Score=376.59 Aligned_cols=228 Identities=24% Similarity=0.364 Sum_probs=188.8
Q ss_pred eEEEEEEEEEEcC--CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---cceEEEcCeecCCCChHHH
Q 000702 1096 TIELIDLKVRYGE--NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA---CGRIIIDNIDISTIGLHDL 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~---~G~I~IdG~di~~i~l~~L 1170 (1343)
.++++|++++|+. +...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5999999999963 2246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----hcceeecCCc--cccC-CchhhhcC----CCCCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCC
Q 000702 1171 R----SRLGIIPQDP--NLFE-GTIRCNLD----PLEEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWS 1235 (1343)
Q Consensus 1171 R----~~i~iVpQdp--~lF~-gTIr~NLd----p~~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1235 (1343)
| ++|++||||| .++. -|+.+|+. .....+. +.+.++|+.+++.+. . ..+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~-------~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEA-------R-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCh-------H-HHhcCCcccCC
Confidence 4 4799999999 4554 37777652 2222232 345667787777431 1 11234456899
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1236 VGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1236 gGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987654 7899999999999875 999999999999999
Q ss_pred cChhHHhhcCCcHHHH-HHH
Q 000702 1313 DTPGRLLEDKSSMFLK-LVT 1331 (1343)
Q Consensus 1313 g~p~eLl~~~~~~f~~-l~~ 1331 (1343)
|+++++.+++..-|.+ |+.
T Consensus 244 g~~~~i~~~p~~pyt~~l~~ 263 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGLLN 263 (330)
T ss_pred CCHHHHHhCCCCHHHHHHHH
Confidence 9999999877655554 444
No 250
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.2e-39 Score=359.46 Aligned_cols=201 Identities=26% Similarity=0.386 Sum_probs=175.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh---HHHhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL---HDLRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l---~~LR~~ 1173 (1343)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987754 347889
Q ss_pred ceeecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++++||+|.+|.+ |+++|+.... ..+ ++++.++++..++.+.....| .+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 9999996421 112 345778888888876544332 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEE
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRV 1309 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~i 1309 (1343)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 47899999999999986 899999999974
No 251
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=362.59 Aligned_cols=212 Identities=26% Similarity=0.412 Sum_probs=187.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+.. ++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|++||+++...+. .++.+++
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 5789999999753 59999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred ecCCccccCC-chhhhcCCC-C------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL-E------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~-~------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+... . ...++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999631 1 112456778889999887765544 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCC
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~ 1323 (1343)
+++|++|||||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.. ||||++|++|++++.|+++++.+.+.
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~~ 223 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEPA 223 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCCc
Confidence 999999999999999999999999999987653 7899999999999865 99999999999999999999986543
No 252
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.5e-39 Score=357.62 Aligned_cols=211 Identities=22% Similarity=0.316 Sum_probs=187.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh----HHHhh
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL----HDLRS 1172 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l----~~LR~ 1172 (1343)
+.+.|+.++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3578999999865 469999999999999999999999999999999999999999999999999876542 34567
Q ss_pred cceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1173 RLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
.++|+||+|.+|+.|+++|+......++++..++++.+++.+.+..+|.|+++.+.....+||+|||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999865445667778899999999988888999999888888999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH--HHHHhc-CCcEEEEeccCcccccccCEEEEEeCCE
Q 000702 1253 RILVLDEATASVDTATDNLIQK--IIRTEF-KDCTVCTIAHRIPTVIDSDLVLVLSDGR 1308 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1308 (1343)
++|||||||++||..+...+.+ .++... .+.|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999888777 444332 3689999999999998899999999984
No 253
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-39 Score=361.20 Aligned_cols=203 Identities=26% Similarity=0.332 Sum_probs=176.5
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999997421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred eeecCCccccC-CchhhhcCCCC---CC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPLE---EH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~~---~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+|+||+|.+|. .|+++|+.... .. .++++.++++..++.+...+.+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 69999996321 11 2356788899998876655443 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEe--CCEEeeecCh
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLS--DGRVAEFDTP 1315 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~--~G~ive~g~p 1315 (1343)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998764 37899999999998765 99999999 7999998764
No 254
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.9e-39 Score=359.42 Aligned_cols=218 Identities=29% Similarity=0.482 Sum_probs=190.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~ 518 (1343)
++++|+++.|.. ..+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKP-DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCC-CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 468999999853 235799999999999999999999999999999999999999999999987 289
Q ss_pred EEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 519 YVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 519 ~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
|++|++++++.|++||+.++.. ....+..+.++..++.+.++.+|.|.++..+.++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999998654 334445555666677777888999999989999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHH
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTDFNA 671 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 671 (1343)
+||||||++||+.+.+.+.+. +....+|+|+|++||+++.+..||++++|++|++++.|+.+++....+.|..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRN-MHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 999999999999998877654 5555568999999999999878999999999999999999998876555544
No 255
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=364.68 Aligned_cols=225 Identities=24% Similarity=0.384 Sum_probs=191.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~l~ 1168 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5999999999964 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCC---C-C----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLE---E-H----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
..|++++|+||+|.+|.+|+++|+.... . . .++.+.++++.+++.+.+.. .....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKD-------RLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHH-------HhhcChhhCCHHHHH
Confidence 7788999999999999999999997421 1 1 12356777888877544321 233445689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++.+|++|||||||++||.++...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987777899999999999865 9999999999999999999998
Q ss_pred hcCCcHHHHH
Q 000702 1320 EDKSSMFLKL 1329 (1343)
Q Consensus 1320 ~~~~~~f~~l 1329 (1343)
+++...+.+.
T Consensus 237 ~~~~~~~~~~ 246 (253)
T PRK14261 237 ENPHEELTEN 246 (253)
T ss_pred hCCCcHHHHH
Confidence 7654434443
No 256
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=367.18 Aligned_cols=223 Identities=24% Similarity=0.335 Sum_probs=192.3
Q ss_pred CCCCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecC--
Q 000702 1091 WPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIS-- 1163 (1343)
Q Consensus 1091 wp~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~-- 1163 (1343)
-|..+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 356788999999999974 3699999999999999999999999999999999999875 7999999998874
Q ss_pred --CCChHHHhhcceeecCCccccCCchhhhcCCCC---C-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1164 --TIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE---E-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1164 --~i~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
......+|++++|+||+|.+|.+|+++|+.... . ..++++.++++.+++.+.+.. .......+
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKD-------RLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhH-------HHhCCccc
Confidence 234457888999999999999999999996421 1 124567888888887643322 22334568
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
||+|||||++||||++++|++|||||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999987767899999999999965 999999999999999
Q ss_pred cChhHHhhcC
Q 000702 1313 DTPGRLLEDK 1322 (1343)
Q Consensus 1313 g~p~eLl~~~ 1322 (1343)
|+++++..++
T Consensus 242 g~~~~~~~~~ 251 (265)
T PRK14252 242 GATDTIFIKP 251 (265)
T ss_pred CCHHHHHhCC
Confidence 9999998654
No 257
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=370.96 Aligned_cols=215 Identities=27% Similarity=0.419 Sum_probs=183.7
Q ss_pred eEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----ChH
Q 000702 1096 TIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI----GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~l~ 1168 (1343)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 3699999999999999999999999999999999999999999999999998753 245
Q ss_pred HHhhcceeecCCc--cccCCchhhhcCCC---CCCCH----HHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhH
Q 000702 1169 DLRSRLGIIPQDP--NLFEGTIRCNLDPL---EEHSD----REIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp--~lF~gTIr~NLdp~---~~~sd----~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
..|+.++++||+| .+|..|+++|+... ...+. +.+.++++.+++. ++... ...+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISK-----------SPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhC-----------CcccCCHHH
Confidence 6788999999998 57888999999631 11222 3356778888875 33222 235799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. ++.|||++||+++.+.. ||||++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 47899999999999864 9999999999999999999
Q ss_pred HHhhc
Q 000702 1317 RLLED 1321 (1343)
Q Consensus 1317 eLl~~ 1321 (1343)
++.++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98753
No 258
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=371.17 Aligned_cols=215 Identities=27% Similarity=0.402 Sum_probs=183.2
Q ss_pred EEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----ChHH
Q 000702 1097 IELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI----GLHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~l~~ 1169 (1343)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3699999999999999999999999999999999999999999999999998764 3467
Q ss_pred HhhcceeecCCc--cccCCchhhhcCCCC---CCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1170 LRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1170 LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
+|++|+|+||+| .+|..|+++|+.... ..+.+ .+.++++..++.+.. ++. ...+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~----~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL------FEK----NPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh------hhC----CcccCCHHHHH
Confidence 888999999998 688899999996321 12332 245667777775321 122 23579999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
|++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999987643 7899999999998865 999999999999999999998
Q ss_pred hhc
Q 000702 1319 LED 1321 (1343)
Q Consensus 1319 l~~ 1321 (1343)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 764
No 259
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=367.75 Aligned_cols=213 Identities=22% Similarity=0.375 Sum_probs=188.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred eeecCCccccC-CchhhhcCCCC-----------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPLE-----------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~~-----------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
+|+||++.+|. .|+++|+.... +..++.+.++++..++.+...+. ...||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----------VDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCChHHHHHH
Confidence 99999998875 59999996421 11234578889998887654332 357999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
+||||++++|++|||||||++||+++...+.+.|++..+ ++|+|+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998865 9999999999999999999987
Q ss_pred h
Q 000702 1320 E 1320 (1343)
Q Consensus 1320 ~ 1320 (1343)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 260
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.7e-39 Score=360.55 Aligned_cols=211 Identities=27% Similarity=0.432 Sum_probs=178.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~i~ 1175 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred eecCCccccCC-chhhhcCCC-CC--CCHHH-HHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPL-EE--HSDRE-IWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~-~~--~sd~e-i~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
|+||++.+|.+ |+++|+... .. ...++ ..++++..+. ++........+||||||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 999999632 11 11222 2344444431 1111223345799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
+|++|||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 7899999999999986 9999999999999999999983
No 261
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=362.37 Aligned_cols=212 Identities=25% Similarity=0.362 Sum_probs=179.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~i 1174 (1343)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 36999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred eeecCCccccCC-chhhhcCCCCC-CC----HHHHHHHHHHc-CCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE-HS----DREIWEALDKS-QLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~-~s----d~ei~~aL~~~-~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
+++||++.+|.+ |+++|+..... .+ ++++.++++.. ++.+. .+. ....||||||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-------~~~----~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-------RIQ----RAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-------HhC----chhhCCHHHHHHHHHHHH
Confidence 999999999985 99999964211 12 22234444443 23221 122 335799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998764 47999999999997755 99999999999999999999975
No 262
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=372.60 Aligned_cols=217 Identities=27% Similarity=0.387 Sum_probs=183.0
Q ss_pred CceEEEEEEEEEEcCCC---CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC----C-
Q 000702 1094 NGTIELIDLKVRYGENL---PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST----I- 1165 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~---~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~----i- 1165 (1343)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999997542 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHHHhhcceeecCCc--cccCCchhhhcCCCC---CCCHH----HHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCC
Q 000702 1166 GLHDLRSRLGIIPQDP--NLFEGTIRCNLDPLE---EHSDR----EIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWS 1235 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp--~lF~gTIr~NLdp~~---~~sd~----ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS 1235 (1343)
+...+|++++|+||+| .+|..|+++|+.... ....+ .+.++++..++. ++. + ....+||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~-------~----~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYV-------K----RSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-------c----CChhhCC
Confidence 3567888999999998 477889999996321 12222 344566666663 222 2 2335799
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1236 VGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1236 gGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
||||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987653 7899999999998755 999999999999999
Q ss_pred cChhHHhhc
Q 000702 1313 DTPGRLLED 1321 (1343)
Q Consensus 1313 g~p~eLl~~ 1321 (1343)
|++++++++
T Consensus 233 g~~~~~~~~ 241 (289)
T PRK13645 233 GSPFEIFSN 241 (289)
T ss_pred CCHHHHhcC
Confidence 999998753
No 263
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.2e-39 Score=344.22 Aligned_cols=172 Identities=38% Similarity=0.615 Sum_probs=162.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+....++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999988889999999
Q ss_pred ecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
+||+|.+|.+|+++|+ ||||||||++||||++++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEEeCCEE
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVLSDGRV 1309 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~i 1309 (1343)
|||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998764 37899999999999988999999999974
No 264
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=364.26 Aligned_cols=222 Identities=22% Similarity=0.327 Sum_probs=192.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCC--ChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTI--GLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i--~l~ 1168 (1343)
.+.+++.+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4899999999974 3699999999999999999999999999999999999986 799999999998653 444
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCCC------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLEE------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
.+|++++|+||+|.+|..|+++|+..... ...+++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 67889999999999999999999974311 1235678899999987655432 2345568999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe--------CCEEeeec
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS--------DGRVAEFD 1313 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~--------~G~ive~g 1313 (1343)
+||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988777899999999998866 99999996 89999999
Q ss_pred ChhHHhhcCCcHH
Q 000702 1314 TPGRLLEDKSSMF 1326 (1343)
Q Consensus 1314 ~p~eLl~~~~~~f 1326 (1343)
+++++++++...+
T Consensus 239 ~~~~~~~~~~~~~ 251 (261)
T PRK14263 239 PTAQIFQNPREQL 251 (261)
T ss_pred CHHHHHhCCCcHH
Confidence 9999987654334
No 265
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.5e-36 Score=356.27 Aligned_cols=442 Identities=21% Similarity=0.243 Sum_probs=323.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCh--h---HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 000702 197 YLGVDILGMHVRSALTAMVYRKGLKLSSLAKQSHTS--G---EIVNYMAVDVQRVGDYS-WYLHDIWMLPLQIILALAIL 270 (1343)
Q Consensus 197 ~~~~~~~~~~ir~~L~~~i~~K~l~l~~~~~~~~~~--G---~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~~l 270 (1343)
.|...++..+.|.-|...+.+|-+.-...++-.... + ..=+++..|+..+.+.. .....+..+.+.++....+|
T Consensus 107 ~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iL 186 (604)
T COG4178 107 TWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGIL 186 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344578899999999999999999877554432221 1 23478999999886643 34556666666677667777
Q ss_pred HHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchHHH
Q 000702 271 YKNVG---------------IASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDR 335 (1343)
Q Consensus 271 ~~~~g---------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~e~l~~i~~IK~~~~e~~ 335 (1343)
|...| ...++.++-.++...+..+++|...+..-+..+...........+-++...|-+|+-|+.
T Consensus 187 w~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~ 266 (604)
T COG4178 187 WSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKV 266 (604)
T ss_pred HHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHH
Confidence 74444 222222222222223334455555554444444444455556678889999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHHHHHHHHHHHHH
Q 000702 336 YRIQLEEMRGVEFRWLRKALYSQAF----ITFIFWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPD 411 (1343)
Q Consensus 336 ~~~~i~~~r~~e~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~ 411 (1343)
-++++++....-++..++......- .....+.+. +..+..++-.+..|.++.|.+..+...|+.+...++.+-+
T Consensus 267 Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~--v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~ 344 (604)
T COG4178 267 ERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSV--VLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFID 344 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHH--HHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766555444443332222211 111111121 1111223334568899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc------ccccccc-cc--CCCCCcceEEEEeeEEEecCCCCCCccccceeEecCCeE
Q 000702 412 LVSMMAQTKVSLDRISGFLQEEE------LQEDATI-VL--PRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMR 482 (1343)
Q Consensus 412 ~~~~~~~a~~s~~Ri~~fl~~~e------~~~~~~~-~~--~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~ 482 (1343)
.+..+.+-+++..|+.+|-..-+ ....... .. .... +..|.++|++..-+ ++++.+++.||++++||.
T Consensus 345 ~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~nl~l~~p--~~~~ll~~l~~~v~~G~~ 421 (604)
T COG4178 345 NYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNA-DHGITLENLSLRTP--DGQTLLSELNFEVRPGER 421 (604)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccc-cceeEEeeeeEECC--CCCeeeccceeeeCCCCE
Confidence 99999999999999999974322 1111100 00 0001 35799999999754 345899999999999999
Q ss_pred EEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--eEEEEcccccccCccHHHHhccCCC---CCHHHHHHHHHHhhhhh
Q 000702 483 VAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--TAAYVSQSAWIQSGNIEENILFGSP---MDKAKYKKVIHACSLKK 557 (1343)
Q Consensus 483 ~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--~i~~v~Q~~~l~~~ti~~Ni~~g~~---~~~~~~~~~~~~~~l~~ 557 (1343)
+.|.|+||||||||+++|+|..|.-+|+|..+. .+-|+||.|++..||.||-|++.+. ++++.+.++++.|+|.+
T Consensus 422 llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~ 501 (604)
T COG4178 422 LLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGD 501 (604)
T ss_pred EEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHH
Confidence 999999999999999999999999999998874 3799999999999999999999753 67899999999999998
Q ss_pred hHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCC
Q 000702 558 DLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVE 637 (1343)
Q Consensus 558 ~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~ 637 (1343)
-.+.+.+-+ .-...||+|||||+++||.++++|++++|||+|||||++++..+++. ++..+.+.|+|-|.||..
T Consensus 502 L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~~lp~~tvISV~Hr~t 575 (604)
T COG4178 502 LAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKEELPDATVISVGHRPT 575 (604)
T ss_pred HHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHhhCCCCEEEEeccchh
Confidence 888875432 35678999999999999999999999999999999999999888764 677778999999999998
Q ss_pred ccccCCEEEEEe
Q 000702 638 FLPAADFILVLK 649 (1343)
Q Consensus 638 ~l~~~d~i~~l~ 649 (1343)
.....++.+.+.
T Consensus 576 l~~~h~~~l~l~ 587 (604)
T COG4178 576 LWNFHSRQLELL 587 (604)
T ss_pred hHHHHhhheeec
Confidence 877766666554
No 266
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-39 Score=365.99 Aligned_cols=219 Identities=26% Similarity=0.409 Sum_probs=188.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCCC-hHH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTIG-LHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~-l~~ 1169 (1343)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999974 3699999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhhcceeecCCccccCCchhhhcCCC----CCCCHHHH----HHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1170 LRSRLGIIPQDPNLFEGTIRCNLDPL----EEHSDREI----WEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~gTIr~NLdp~----~~~sd~ei----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+|++++|+||+|.+|..|+++|+... ...+++++ .++++.+++.+... +.+.....+||||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 78999999999999999999999732 12344443 45567777654331 22334456899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999875 99999999999999999999987
Q ss_pred cCC
Q 000702 1321 DKS 1323 (1343)
Q Consensus 1321 ~~~ 1323 (1343)
.+.
T Consensus 252 ~~~ 254 (276)
T PRK14271 252 SPK 254 (276)
T ss_pred CcC
Confidence 643
No 267
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.4e-39 Score=367.03 Aligned_cols=227 Identities=25% Similarity=0.356 Sum_probs=190.5
Q ss_pred eEEEEEEEEEEcCC-------CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH
Q 000702 1096 TIELIDLKVRYGEN-------LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~ 1168 (1343)
-|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999621 23699999999999999999999999999999999999999999999999999765556
Q ss_pred HHhhcceeecCCcc--ccCC-chhhhcCC----CC----CCCHHHHHHHHHHcCCc-hHHhcccCCCCcccccCCCCCCh
Q 000702 1169 DLRSRLGIIPQDPN--LFEG-TIRCNLDP----LE----EHSDREIWEALDKSQLG-DIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~--lF~g-TIr~NLdp----~~----~~sd~ei~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
..|++++|+||+|. ++.. |+.+|+.. .. ...++++.++++.+++. +... ..+ .+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~----~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHAS-------YYP----HMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHh-------cCc----hhcCH
Confidence 66778999999985 4443 78887742 11 11235678899999984 3322 222 47999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
|||||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998643 7899999999999987 9999999999999999
Q ss_pred ChhHHhhcC-CcHHHHHHHHh
Q 000702 1314 TPGRLLEDK-SSMFLKLVTEY 1333 (1343)
Q Consensus 1314 ~p~eLl~~~-~~~f~~l~~~~ 1333 (1343)
+++++.+++ +..+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998764 34566777654
No 268
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-39 Score=363.45 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=186.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999974 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred eecCCccc-cCCchhhhcCCCC--C-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNL-FEGTIRCNLDPLE--E-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~l-F~gTIr~NLdp~~--~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
|+||++.+ +..|+++|+.... . ..++.+.++++.+++.+...+. ...||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRD-----------YPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99999987 6779999996421 1 1234577888888886654332 25799999999999999
Q ss_pred Hh------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1248 LL------KQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1248 LL------~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
|+ .+|++|||||||++||+.+...+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999998764 47899999999999874 999999999999999999998
Q ss_pred hh
Q 000702 1319 LE 1320 (1343)
Q Consensus 1319 l~ 1320 (1343)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 269
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-39 Score=365.01 Aligned_cols=221 Identities=24% Similarity=0.395 Sum_probs=190.1
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC-----cceEEEcCeecCC--CCh
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA-----CGRIIIDNIDIST--IGL 1167 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~--i~l 1167 (1343)
+.|+++|++++|+. +.+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhhcceeecCCccccCCchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1168 HDLRSRLGIIPQDPNLFEGTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
..+|+.++++||++.+|..|+++|+... +..+ ++.+.++++.+++.+++..+ .......||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 5778899999999999999999999632 1112 23467788899887655422 2334468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeC-----CEEee
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSD-----GRVAE 1311 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~-----G~ive 1311 (1343)
||++||||++++|++|||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||||++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998743 47999999999999865 999999999 99999
Q ss_pred ecChhHHhhcCCc
Q 000702 1312 FDTPGRLLEDKSS 1324 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~ 1324 (1343)
.|+|+++.+++..
T Consensus 237 ~~~~~~~~~~~~~ 249 (261)
T PRK14258 237 FGLTKKIFNSPHD 249 (261)
T ss_pred eCCHHHHHhCCCC
Confidence 9999999876554
No 270
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-39 Score=368.62 Aligned_cols=212 Identities=31% Similarity=0.442 Sum_probs=183.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecC--CCChHHHhhcc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIS--TIGLHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~--~i~l~~LR~~i 1174 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999974 35999999999999999999999999999999999999999999999999985 33455778899
Q ss_pred eeecCCcc--ccCCchhhhcCCC---CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPN--LFEGTIRCNLDPL---EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~--lF~gTIr~NLdp~---~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+|+||+|. +|..|+.+|+... ...+. +++.++++.+++.++.. .+ ..+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-------QP----IQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-------CC----chhCCHHHHHHHHHH
Confidence 99999985 5778999998642 11222 34567888888865532 22 257999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||||++|++|++++.|+++++...
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 47899999999999865 999999999999999999998764
No 271
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-39 Score=362.43 Aligned_cols=204 Identities=27% Similarity=0.410 Sum_probs=179.6
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 35999999999974 36999999999999999999999999999999999999999999999998763 567889
Q ss_pred eeecCCccccC-CchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
+|+||+|.+|. .|+++|+... ....++++.++++..++.+..... ..+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANEW-----------PAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 6999999743 222356788899999887654332 2579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChh
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPG 1316 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~ 1316 (1343)
++|||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998764 37899999999998865 9999999999999988754
No 272
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.2e-39 Score=335.91 Aligned_cols=204 Identities=31% Similarity=0.470 Sum_probs=174.6
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------- 515 (1343)
..|++++++++|. ++.+++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|
T Consensus 7 ~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 4699999999983 57899999999999999999999999999999999999999999999988
Q ss_pred --eEEEEcccccccC-ccHHHHhccCC----CCCHHHHHHH----HHHhhhhhh-HhhccCCCccccCCCCCCCChHHHH
Q 000702 516 --TAAYVSQSAWIQS-GNIEENILFGS----PMDKAKYKKV----IHACSLKKD-LELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 --~i~~v~Q~~~l~~-~ti~~Ni~~g~----~~~~~~~~~~----~~~~~l~~~-~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
++|+++|..-||+ -||+||+.|.. ..+++.+++. +++++|..+ .+.+| ..||||.+.
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~K 152 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRK 152 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHH
Confidence 3899999999885 69999999952 2445444443 456666665 44444 579999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC--CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALA--NKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~--~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 660 (1343)
|+|||||+..||+++++|||||+|||.++.. |.++++.+.+ |.|+|+|||+++.+.. ||+|+++.||+|+..|+++
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~-~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~ 231 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGV-IDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPE 231 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHH-HHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHH
Confidence 9999999999999999999999999998654 4666755433 8999999999998765 9999999999999999999
Q ss_pred HHHhcCcc
Q 000702 661 DLLQAGTD 668 (1343)
Q Consensus 661 ~l~~~~~~ 668 (1343)
|+.+.+..
T Consensus 232 el~~sd~P 239 (263)
T COG1127 232 ELLASDDP 239 (263)
T ss_pred HHHhCCCH
Confidence 99876543
No 273
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-39 Score=354.67 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=175.6
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999742 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred ecCCccccCC-chhhhcCCCCC-------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLEE-------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~~-------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+..... .+++++.++++.+++.+...+.| .+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999976 99999974211 13456888999999977665544 36999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
+++|++|||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999864 37899999999999866 9999999999998764
No 274
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=361.11 Aligned_cols=213 Identities=26% Similarity=0.430 Sum_probs=182.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~i 1174 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999964 36999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred eeecCCccccCC-chhhhcCCCC----CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE----EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~----~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+++||++.+|.+ |+++|+.... ..+ ++.+.+.++..++.+.. ......||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLR-----------DSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHh-----------hcchhhCCHHHHHHHHHH
Confidence 999999999885 9999997431 112 22355566666654332 223357999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||++++|++|||||||++||+.+...+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999988754 47899999999987755 999999999999999999999753
No 275
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.8e-39 Score=359.58 Aligned_cols=210 Identities=27% Similarity=0.455 Sum_probs=184.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999975 359999999999999999999999999999999999999999999999999987653 4778999
Q ss_pred ecCCccccCC-chhhhcCCCC---CC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE---EH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~---~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+.... .. .++++.+++++.++.++..+.+ .+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP-----------NQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 2345778888888866544332 47999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+++|+++||||||++||.++...+.+.|++..+ ++|+|++||+++.+.. ||||++|++|++++.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999987544 6899999999998766 999999999999999999999854
No 276
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-39 Score=367.81 Aligned_cols=213 Identities=29% Similarity=0.438 Sum_probs=184.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC--CChHHHhhcc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST--IGLHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~--i~l~~LR~~i 1174 (1343)
|+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++. .+...+|++|
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999633 359999999999999999999999999999999999999999999999999853 2345678999
Q ss_pred eeecCCc--cccCCchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDP--NLFEGTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp--~lF~gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+|+||+| .+|..|+++|+.... ..+ .+++.++++.+++.++... .+ .+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-------~~----~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-------PP----HHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-------Ch----hhCCHHHHHHHHHH
Confidence 9999998 578899999996311 122 2456778888888654332 22 47999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||++.+|++|||||||++||+.+...+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998653 7899999999999875 999999999999999999998763
No 277
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.7e-39 Score=373.01 Aligned_cols=212 Identities=27% Similarity=0.422 Sum_probs=183.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999974 3599999999999999999999999999999999999999999999999998764 356788999
Q ss_pred eecCCccccC-CchhhhcCCC---CCCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFE-GTIRCNLDPL---EEHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~-gTIr~NLdp~---~~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
|+||++.+|. .|+++|+..+ ...+.. .+.++++.+++.+. +++.+ .+||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999632 122322 34556777776543 33444 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|+++|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998764 47899999999999875 999999999999999999999754
No 278
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.2e-39 Score=352.13 Aligned_cols=201 Identities=32% Similarity=0.473 Sum_probs=172.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++|+|. ++++|+|+||++++||+++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999985 47899999999999999999999999999999999999999999999999 48
Q ss_pred EEEcccc-cccCccHHHHhccCCC--------C---CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 518 AYVSQSA-WIQSGNIEENILFGSP--------M---DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 518 ~~v~Q~~-~l~~~ti~~Ni~~g~~--------~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
|||||++ .-+.-||+|-+.+|+- . |.+...++++.+++.+.. ......||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 9999996 4578899999999952 1 223445556666655432 245667999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcc-ccCCEEEEEeCCeEEEecChHHHH
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFL-PAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
.|||||+++|++++||||||+||....-++++.+.+.. .+|+|+|+|+|+++.. ..||++++|++|+++.+|+++|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999987654433 3589999999999875 569999999999999999999887
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 53
No 279
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=363.67 Aligned_cols=224 Identities=25% Similarity=0.387 Sum_probs=187.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC-----cceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA-----CGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~-----~G~I~IdG~di~~--i~l~ 1168 (1343)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.+++. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4889999999974 36999999999999999999999999999999999999874 8999999999975 3445
Q ss_pred HHhhcceeecCCccccCC-chhhhcCCC---CCC-CHHH----HHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1169 DLRSRLGIIPQDPNLFEG-TIRCNLDPL---EEH-SDRE----IWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~g-TIr~NLdp~---~~~-sd~e----i~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
.+|++++|+||+|.+|.+ |+++|+... ... .+++ ..+.++..++.+.+ +..++.++ .+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~~----~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTPA----TGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCCc----ccCCHHHH
Confidence 778899999999999985 999999631 111 2333 33445556655433 22344443 68999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eL 1318 (1343)
||++||||++++|++|||||||++||..+...+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999886 999999999999999999999
Q ss_pred hhcCCcHHHH
Q 000702 1319 LEDKSSMFLK 1328 (1343)
Q Consensus 1319 l~~~~~~f~~ 1328 (1343)
++++...+.+
T Consensus 235 ~~~~~~~~~~ 244 (252)
T PRK14272 235 FTNPRDERTE 244 (252)
T ss_pred HhCcCcHHHH
Confidence 8776554543
No 280
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.6e-39 Score=358.10 Aligned_cols=206 Identities=24% Similarity=0.320 Sum_probs=179.6
Q ss_pred eEEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---H
Q 000702 1096 TIELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---L 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---L 1170 (1343)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hhcceeecCCccccCC-chhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1171 -RSRLGIIPQDPNLFEG-TIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1171 -R~~i~iVpQdp~lF~g-TIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+++++++||+|.+|.+ |+++|+... ... ..+++.++++..++.+.....| ..||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999885 999998631 111 2345788899999877655443 4699999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEEeee
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~ive~ 1312 (1343)
++|||||+++|++|||||||++||+++...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999987642 6899999999999888999999999999874
No 281
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=365.02 Aligned_cols=222 Identities=24% Similarity=0.424 Sum_probs=190.1
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--C
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--I 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i 1165 (1343)
..-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 17 ~~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 17 DHSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred CCceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 3346999999999974 3599999999999999999999999999999999999863 59999999999864 3
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCCCC------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPLEE------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
+...+|++++|+||++.+|..|+++|+..... ..++++.++++.+++.+.+.. -++ .....||||||
T Consensus 95 ~~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~~----~~~~~LSgGq~ 167 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD---KLK----EKGTALSGGQQ 167 (274)
T ss_pred hhHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH---Hhc----CCcccCCHHHH
Confidence 44567889999999999999999999964211 124456778888888655432 122 33468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe---------CCEE
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS---------DGRV 1309 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~---------~G~i 1309 (1343)
||++|||||+++|++|||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|++
T Consensus 168 qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~ 247 (274)
T PRK14265 168 QRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKL 247 (274)
T ss_pred HHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceE
Confidence 9999999999999999999999999999999999999988778999999999999865 99999997 8999
Q ss_pred eeecChhHHhhcCC
Q 000702 1310 AEFDTPGRLLEDKS 1323 (1343)
Q Consensus 1310 ve~g~p~eLl~~~~ 1323 (1343)
++.|+++++..++.
T Consensus 248 ~~~g~~~~~~~~~~ 261 (274)
T PRK14265 248 VEFSPTEQMFGSPQ 261 (274)
T ss_pred EEeCCHHHHHhCCC
Confidence 99999999987543
No 282
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=364.57 Aligned_cols=219 Identities=24% Similarity=0.421 Sum_probs=186.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~--i~l~ 1168 (1343)
.++++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 48999999999743 599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HHhhcceeecCCccccC-CchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1169 DLRSRLGIIPQDPNLFE-GTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~-gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
.+|+.++++||++.+|. .|+++|+... ...+ ++.+.++++.+++.+.+.. .++ ....+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD---RLD----KPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh---Hhh----CCcccCCHHHH
Confidence 78889999999999997 5999999631 1111 2456778888888644321 122 33468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEe------CCEEeee
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLS------DGRVAEF 1312 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~------~G~ive~ 1312 (1343)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999865 99999997 8999999
Q ss_pred cChhHHhhcCC
Q 000702 1313 DTPGRLLEDKS 1323 (1343)
Q Consensus 1313 g~p~eLl~~~~ 1323 (1343)
|+|++++.++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999986543
No 283
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-39 Score=361.41 Aligned_cols=219 Identities=25% Similarity=0.409 Sum_probs=188.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecC-CCChHH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDIS-TIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~-~i~l~~ 1169 (1343)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999974 4699999999999999999999999999999999999986 5999999999986 445667
Q ss_pred HhhcceeecCCccccCCchhhhcCCCC---CC-C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1170 LRSRLGIIPQDPNLFEGTIRCNLDPLE---EH-S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~-s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+|+.++|+||+|.+|.+|+++|+.... .. . ++++.++++.+++.+.+.. .++ .....||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~----~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKD---RLK----SHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhH---Hhh----cCcccCCHHHHHH
Confidence 889999999999999999999997421 11 1 2345667888887654421 122 3346899999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
++||||++.+|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999988777899999999999876 99999999999999999999876
Q ss_pred cCC
Q 000702 1321 DKS 1323 (1343)
Q Consensus 1321 ~~~ 1323 (1343)
++.
T Consensus 234 ~~~ 236 (249)
T PRK14253 234 NPK 236 (249)
T ss_pred CCC
Confidence 543
No 284
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.1e-39 Score=356.94 Aligned_cols=197 Identities=31% Similarity=0.445 Sum_probs=170.2
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36899999964 35999999999999999999999999999999999999999999999998874 468899999
Q ss_pred cCCccc---cCCchhhhcCCCCC-----------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1178 PQDPNL---FEGTIRCNLDPLEE-----------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1178 pQdp~l---F~gTIr~NLdp~~~-----------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
||+|.+ |..|+++|+..... ..++++.++++..++.++..+. ..+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHH
Confidence 999986 56899999963211 1234678889999987655432 2479999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
|||||+++|++|||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999998764 57899999999999876 8999999986 55544
No 285
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=373.96 Aligned_cols=228 Identities=21% Similarity=0.331 Sum_probs=188.9
Q ss_pred eEEEEEEEEEEcC--CCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC----CCcceEEEcCeecCCCChHH
Q 000702 1096 TIELIDLKVRYGE--NLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE----PACGRIIIDNIDISTIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~--~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~----~~~G~I~IdG~di~~i~l~~ 1169 (1343)
-|+++|++++|+. +...+|+||||+|++||++||||+||||||||+++|.|+.+ |++|+|.+||+|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22459999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----hcceeecCCccc--c-CCchhhhcCC----C---CC------CCHHHHHHHHHHcCCchHHhcccCCCCccccc
Q 000702 1170 LR----SRLGIIPQDPNL--F-EGTIRCNLDP----L---EE------HSDREIWEALDKSQLGDIVRGKDQKLETPVLE 1229 (1343)
Q Consensus 1170 LR----~~i~iVpQdp~l--F-~gTIr~NLdp----~---~~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e 1229 (1343)
++ ++|++|||+|.. + ..||.+|+.. . .. ...+++.++|++++|.+.-.. ++ .
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----~~----~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA----MR----S 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH----Hh----C
Confidence 53 479999999963 3 2488888741 1 00 113467889999999753211 11 1
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeC
Q 000702 1230 NGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSD 1306 (1343)
Q Consensus 1230 ~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~ 1306 (1343)
....||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 2257999999999999999999999999999999999999999999998653 7899999999999966 999999999
Q ss_pred CEEeeecChhHHhhcCCcHHHH-HHH
Q 000702 1307 GRVAEFDTPGRLLEDKSSMFLK-LVT 1331 (1343)
Q Consensus 1307 G~ive~g~p~eLl~~~~~~f~~-l~~ 1331 (1343)
|+|+|.|+++++++++...|.+ +..
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ll~ 260 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQALIR 260 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 9999999999999876555654 443
No 286
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-39 Score=367.46 Aligned_cols=224 Identities=24% Similarity=0.362 Sum_probs=189.3
Q ss_pred CceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCCC--C
Q 000702 1094 NGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDISTI--G 1166 (1343)
Q Consensus 1094 ~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i--~ 1166 (1343)
...|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346999999999964 359999999999999999999999999999999999865 4999999999998653 3
Q ss_pred hHHHhhcceeecCCccccCCchhhhcCCCC---CC-C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1167 LHDLRSRLGIIPQDPNLFEGTIRCNLDPLE---EH-S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1167 l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~---~~-s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+. +.++. ....|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLDK----NALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhhC----ChhhCCHHH
Confidence 345788999999999999999999997421 11 1 234667888888754332 12233 346799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
|||++|||||+++|++|||||||++||.++...+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcCCcHH
Q 000702 1318 LLEDKSSMF 1326 (1343)
Q Consensus 1318 Ll~~~~~~f 1326 (1343)
+.+++...+
T Consensus 268 ~~~~~~~~~ 276 (286)
T PRK14275 268 LFTNPKDRM 276 (286)
T ss_pred HHhCCCcHH
Confidence 987654434
No 287
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-39 Score=375.73 Aligned_cols=212 Identities=27% Similarity=0.443 Sum_probs=184.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+++|+.. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|++|+
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 59999999999743 5999999999999999999999999999999999999999999999999997654 56788999
Q ss_pred eecCCccccC-CchhhhcCCCC---CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFE-GTIRCNLDPLE---EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~-gTIr~NLdp~~---~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
|+||++.+|. .|+++|+..+. ..+. +.+.++++.++|.+. .+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-------~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-------hCCCh----hhCCHHHHHHHHHHHH
Confidence 9999999874 59999996422 1222 234566777776543 34444 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|+.+|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.+ ||||++|++|+++..|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47999999999999976 999999999999999999999764
No 288
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.4e-39 Score=377.28 Aligned_cols=204 Identities=21% Similarity=0.309 Sum_probs=177.7
Q ss_pred cccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCe----ecCCCChHHHh----hcceeecCCccc
Q 000702 1112 LVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNI----DISTIGLHDLR----SRLGIIPQDPNL 1183 (1343)
Q Consensus 1112 ~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~----di~~i~l~~LR----~~i~iVpQdp~l 1183 (1343)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+| ++|+||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5899999999999999999999999999999999999999999999996 67777665543 579999999999
Q ss_pred cC-CchhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1184 FE-GTIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1184 F~-gTIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
|. .|+++|+.... ..+ .+...++++.++|.++....| .+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 69999996321 122 235678899999977654433 469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHH
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMF 1326 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f 1326 (1343)
|||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++...|
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 99999999999999999999988654 7899999999999754 99999999999999999999997765544
No 289
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-39 Score=369.67 Aligned_cols=221 Identities=27% Similarity=0.462 Sum_probs=190.0
Q ss_pred CCceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-----CCcceEEEcCeecCCC--
Q 000702 1093 ENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-----PACGRIIIDNIDISTI-- 1165 (1343)
Q Consensus 1093 ~~g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-----~~~G~I~IdG~di~~i-- 1165 (1343)
.+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...
T Consensus 42 ~~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3446999999999975 359999999999999999999999999999999999986 6899999999998753
Q ss_pred ChHHHhhcceeecCCccccCCchhhhcCCCC--------------------CCCHHHHHHHHHHcCCchHHhcccCCCCc
Q 000702 1166 GLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE--------------------EHSDREIWEALDKSQLGDIVRGKDQKLET 1225 (1343)
Q Consensus 1166 ~l~~LR~~i~iVpQdp~lF~gTIr~NLdp~~--------------------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt 1225 (1343)
+...+|++++|+||++.+|.+|+++|+.... +..++++.++++.+++.+.+. .
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~ 192 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------D 192 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------H
Confidence 4567889999999999999999999997321 011345778888888754432 2
Q ss_pred ccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEE-EE
Q 000702 1226 PVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLV-LV 1303 (1343)
Q Consensus 1226 ~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrI-lv 1303 (1343)
.......+||||||||++|||||+++|+||||||||++||..+...+.+.|++..++.|+|+|+|+++.+.. |||| ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 234455789999999999999999999999999999999999999999999988777899999999999866 9997 57
Q ss_pred EeCCEEeeecChhHHhhcC
Q 000702 1304 LSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1304 l~~G~ive~g~p~eLl~~~ 1322 (1343)
|++|++++.|+++++.+.+
T Consensus 273 l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 273 LTGGELVEYDDTDKIFENP 291 (305)
T ss_pred ecCCEEEEeCCHHHHHhCc
Confidence 8999999999999998654
No 290
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=356.00 Aligned_cols=208 Identities=25% Similarity=0.381 Sum_probs=183.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .++.++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999742 249999999999999999999999999999999999999999999999887654 3568999
Q ss_pred ecCCccccCC-chhhhcCCC-C-C-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL-E-E-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~-~-~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+... . . ..++++.++++.+++.+.+.+.| ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999732 1 1 12456889999999987766554 36999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+++|++|||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||||++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998653 7899999999999865 999999999999999999999864
No 291
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=5.5e-39 Score=370.96 Aligned_cols=211 Identities=23% Similarity=0.359 Sum_probs=187.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 889999999964 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred ecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++||.... ..+ .+++.++++..++.+...+ . ..+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHK-------K----IGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcC-------c----hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 122 3457778888888665432 2 357999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
+++|++|+|||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|++|+++..|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999988778999999999999876 999999999999999999999764
No 292
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-39 Score=363.04 Aligned_cols=213 Identities=22% Similarity=0.343 Sum_probs=182.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i 1174 (1343)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999964 369999999999999999999999999999999999999999999999999998876664 4569
Q ss_pred eeecCCccccCC-chhhhcCCCCC-------------------CC---HHHHHHHHHHcCCchHHhcccCCCCcccccCC
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE-------------------HS---DREIWEALDKSQLGDIVRGKDQKLETPVLENG 1231 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~-------------------~s---d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1231 (1343)
+++||+|.+|.+ |+++|+..... .. .+.+.++++..++.+.. ....
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHA-----------NRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhh-----------hCCh
Confidence 999999999986 99999974210 00 12345556666654332 3334
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCE
Q 000702 1232 DNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGR 1308 (1343)
Q Consensus 1232 ~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1308 (1343)
.+||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 68999999999999999999999999999999999999999999987643 6899999999999866 99999999999
Q ss_pred EeeecChhHHhhc
Q 000702 1309 VAEFDTPGRLLED 1321 (1343)
Q Consensus 1309 ive~g~p~eLl~~ 1321 (1343)
+++.|+++++.++
T Consensus 232 i~~~~~~~~~~~~ 244 (255)
T PRK11300 232 PLANGTPEEIRNN 244 (255)
T ss_pred EEecCCHHHHhhC
Confidence 9999999998753
No 293
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=6.4e-39 Score=363.00 Aligned_cols=211 Identities=26% Similarity=0.404 Sum_probs=185.9
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 369999999999999999999999999999999999999999999999999999888888889999
Q ss_pred ecCCcc-ccCCchhhhcCCCC----C-------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHH
Q 000702 1177 IPQDPN-LFEGTIRCNLDPLE----E-------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSL 1244 (1343)
Q Consensus 1177 VpQdp~-lF~gTIr~NLdp~~----~-------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~L 1244 (1343)
+||+|. .+..|+++|+.... . ..++++.++++.+++.+.... ....||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHH
Confidence 999995 45679999996421 0 123357888998888654433 225799999999999
Q ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHhh
Q 000702 1245 GRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1245 ARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|+|++||+++.+. .||||++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999987643 689999999999995 599999999999999999999864
No 294
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6e-39 Score=355.88 Aligned_cols=209 Identities=25% Similarity=0.360 Sum_probs=182.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||++.|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred eecCCccccCCchhhhcCCC----CC-CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1176 IIPQDPNLFEGTIRCNLDPL----EE-HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1176 iVpQdp~lF~gTIr~NLdp~----~~-~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
++||+|.+|..|+++|+... .. ..++++.++++..++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 1234566788888875321 122336899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEe-CCEEeeecChh
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLS-DGRVAEFDTPG 1316 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~-~G~ive~g~p~ 1316 (1343)
+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998643 789999999999998899999995 66777888875
No 295
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-38 Score=360.50 Aligned_cols=226 Identities=22% Similarity=0.322 Sum_probs=187.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC----CcceEEEcCeecCCCChHHHh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP----ACGRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~----~~G~I~IdG~di~~i~l~~LR 1171 (1343)
.|+++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 59999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred hcceeecCCcc-ccC--CchhhhcCC-----CCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1172 SRLGIIPQDPN-LFE--GTIRCNLDP-----LEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1172 ~~i~iVpQdp~-lF~--gTIr~NLdp-----~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
+.++|+||+|. .|. .|+.+|+.. .....+++++++++.+++.+.. +.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--------~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAA--------RVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChh--------hhhhcCCcccCHHHHHHHH
Confidence 67999999985 444 477776531 1123456788999999886531 1223334689999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998643 6899999999999865 99999999999999999999987
Q ss_pred cCCc-HHHHHHHHhc
Q 000702 1321 DKSS-MFLKLVTEYS 1334 (1343)
Q Consensus 1321 ~~~~-~f~~l~~~~~ 1334 (1343)
++.. .++.++....
T Consensus 231 ~~~~~~~~~~~~~~~ 245 (254)
T PRK10418 231 APKHAVTRSLVSAHL 245 (254)
T ss_pred CCCCHHHHHHHHhhh
Confidence 6544 5666665443
No 296
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=6.7e-39 Score=355.20 Aligned_cols=203 Identities=29% Similarity=0.387 Sum_probs=175.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH---Hhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD---LRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~---LR~~ 1173 (1343)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|+.
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred ceeecCCcccc-CCchhhhcCCC---CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1174 LGIIPQDPNLF-EGTIRCNLDPL---EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1174 i~iVpQdp~lF-~gTIr~NLdp~---~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
++|+||+|.+| ..|+++|+... ...++ +++.++++..++.+...+.+ .+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP-----------IQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------hhCCHHHHHHHHHH
Confidence 99999999874 67999999742 12232 24667888888866544322 57999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999764 46899999999999976 89999999999853
No 297
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1e-38 Score=355.68 Aligned_cols=206 Identities=27% Similarity=0.393 Sum_probs=172.9
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh---HHHh
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL---HDLR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l---~~LR 1171 (1343)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 269999999999999999999999999999999999999999999999999988763 5678
Q ss_pred hcceeecCCc--ccc-CCchhhhcCC----CC-CCCHHH---H-HHHHHHcCCc-hHHhcccCCCCcccccCCCCCChhH
Q 000702 1172 SRLGIIPQDP--NLF-EGTIRCNLDP----LE-EHSDRE---I-WEALDKSQLG-DIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1172 ~~i~iVpQdp--~lF-~gTIr~NLdp----~~-~~sd~e---i-~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
++++|+||+| .++ ..|+++|+.. .. ...+++ . .++++..++. +.. .....+|||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~G~ 150 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVL-----------NRYPHELSGGQ 150 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHh-----------hCCchhcCHHH
Confidence 8999999999 344 4699999852 11 111221 1 2556666663 222 22335799999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-ccCEEEEEeCCEEeeec
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g 1313 (1343)
|||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 151 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 151 RQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999999999998754 789999999999987 49999999999998765
No 298
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-39 Score=363.53 Aligned_cols=201 Identities=32% Similarity=0.439 Sum_probs=171.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~~ 519 (1343)
.|+++|++..|.+ ..+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|. +|+
T Consensus 3 ~i~l~~v~K~yg~---~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGS---FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 5899999999853 12999999999999999999999999999999999999999999999983 899
Q ss_pred Eccccccc-CccHHHHhccCCCCC-------HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQ-SGNIEENILFGSPMD-------KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~-~~ti~~Ni~~g~~~~-------~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
|+|+.-++ +.||+|||.||.... +++.+++.+.+++.+.++ .+...||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHHHHHHHH
Confidence 99998776 569999999997642 345666666666666554 45568999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCcc-ccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFL-PAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
.++|++++||||+|+||++....+-.++.+... -+.|+|.|||+.... ..+|+|++|++|+|.+.|++.|+..+
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 999999999999999999997777655433221 378999999998765 46999999999999999999999764
No 299
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=360.84 Aligned_cols=222 Identities=24% Similarity=0.358 Sum_probs=188.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC--C---CcceEEEcCeecCC--CChH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE--P---ACGRIIIDNIDIST--IGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~--~---~~G~I~IdG~di~~--i~l~ 1168 (1343)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 469999999999999999999999999999999999975 4 58999999999864 3345
Q ss_pred HHhhcceeecCCccccCCchhhhcCCC---CC--C---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPL---EE--H---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~---~~--~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
.+|++++|+||+|.+|..|+++|+... .. . .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKD-------HLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhh-------HHhcCcccCCHHHHH
Confidence 678899999999999999999999631 11 1 13456777888877544321 122334689999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|++|||||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|++.++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCCcHH
Q 000702 1320 EDKSSMF 1326 (1343)
Q Consensus 1320 ~~~~~~f 1326 (1343)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7655443
No 300
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=354.22 Aligned_cols=200 Identities=26% Similarity=0.457 Sum_probs=173.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999964 369999999999999999999999999999999999999999999999998753 56789999
Q ss_pred ecCCccccCC-chhhhcCCCC---CC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE---EH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~---~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+|.+ |+++|+.... .. .++++.++++..++.+.... ...+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999999975 9999985321 11 13456777888887654432 2357999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
+.+|++|||||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998764 46899999999999865 9999999999998865
No 301
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.8e-38 Score=359.70 Aligned_cols=223 Identities=22% Similarity=0.380 Sum_probs=184.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCee-----cCCCChHH-
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNID-----ISTIGLHD- 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~d-----i~~i~l~~- 1169 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5999999999974 369999999999999999999999999999999999999999999999999 87776554
Q ss_pred ---HhhcceeecCCcc--ccC-CchhhhcCC----CCCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCC
Q 000702 1170 ---LRSRLGIIPQDPN--LFE-GTIRCNLDP----LEEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWS 1235 (1343)
Q Consensus 1170 ---LR~~i~iVpQdp~--lF~-gTIr~NLdp----~~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1235 (1343)
.|+.++|+||+|. ++. .|+++|+.. +.... .+++.++++..++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 333 477877641 11111 234455666666532 12234457899
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1236 VGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1236 gGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
||||||++|||||+++|+||||||||++||+++...+.+.|++..+ +.|+|+|||+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987643 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCcHHHHHH
Q 000702 1313 DTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1313 g~p~eLl~~~~~~f~~l~ 1330 (1343)
|+++++..++...|.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~~ 251 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQLL 251 (258)
T ss_pred CCHHHHhcCCCCHHHHHH
Confidence 999999876555565443
No 302
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=358.74 Aligned_cols=225 Identities=28% Similarity=0.400 Sum_probs=190.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcC------eecCCCChHH
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDN------IDISTIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG------~di~~i~l~~ 1169 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| .++.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999974 3699999999999999999999999999999999999999997666654 6777777778
Q ss_pred HhhcceeecCCccccCC-chhhhcCCC---CCC-CH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHH
Q 000702 1170 LRSRLGIIPQDPNLFEG-TIRCNLDPL---EEH-SD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQ 1240 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~g-TIr~NLdp~---~~~-sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQ 1240 (1343)
+|++++|+||+|.+|.+ |+++|+... ... .. +.+.++++..++.+.+.. .+ ...+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~----~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD---RL----NSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh---hh----cCCcccCCHHHHH
Confidence 89999999999999976 999999732 111 22 235677888888654421 12 2344679999999
Q ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHh
Q 000702 1241 LVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1241 rl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
|++||||++++|++|+|||||++||..+.+.+.+.|++..+++|+|++||+++.+. -||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999998777799999999999995 49999999999999999999998
Q ss_pred hcCCcHHHHH
Q 000702 1320 EDKSSMFLKL 1329 (1343)
Q Consensus 1320 ~~~~~~f~~l 1329 (1343)
+.+...+.+.
T Consensus 241 ~~~~~~~~~~ 250 (257)
T PRK14246 241 TSPKNELTEK 250 (257)
T ss_pred hCCCcHHHHH
Confidence 7665545444
No 303
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-38 Score=356.39 Aligned_cols=210 Identities=24% Similarity=0.418 Sum_probs=185.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. + +|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999974 2 8999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred ecCCccccC-CchhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFE-GTIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+|. .|+++|+... ... .++++.++++.+++.+++.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999995 6999999631 111 2345778899999877665443 46999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
+++|++|+|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7999999999999876 9999999999999999999998754
No 304
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.5e-39 Score=353.26 Aligned_cols=200 Identities=30% Similarity=0.490 Sum_probs=173.0
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCC--CChHHHhhcc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIST--IGLHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~--i~l~~LR~~i 1174 (1343)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999975 369999999999999999999999999999999999999999999999999853 3456678899
Q ss_pred eeecCCccccC-CchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLG 1245 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LA 1245 (1343)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+.+ .+||||||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc-----------cccCHHHHHHHHHH
Confidence 99999999986 5999999642 1222 234667778877765544332 57999999999999
Q ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEE
Q 000702 1246 RALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRV 1309 (1343)
Q Consensus 1246 RALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~i 1309 (1343)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999764 37899999999999975 999999999975
No 305
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.4e-38 Score=353.50 Aligned_cols=214 Identities=32% Similarity=0.544 Sum_probs=187.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~ 518 (1343)
++++|+++.|....++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 3688999998543335799999999999999999999999999999999999999999999987 389
Q ss_pred EEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 519 YVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 519 ~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
|++|++++++.|++||+.++.. ...++..+.++.+++.+.+..+|.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 234455566777788878888999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
+||||||++||+.+.+.+.+. +....+|+|+|++||+++.+..||+|++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~~~-l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEA-LDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 999999999999998877654 44444789999999999988889999999999999999988876543
No 306
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.1e-38 Score=358.78 Aligned_cols=212 Identities=22% Similarity=0.257 Sum_probs=178.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhccc--CCCcceEEEcCeecCCCChHHH-hhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLI--EPACGRIIIDNIDISTIGLHDL-RSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~l~~L-R~~ 1173 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999974 36999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred ceeecCCccccCC-chhhhcCCC----CC------CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPL----EE------HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~----~~------~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1238 (1343)
++++||+|.+|.+ |+++|+... .. .+ ++.+.++++..++.+.. ++..+. ..|||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999986 899987421 00 11 23467777888775321 122221 2499999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc--cCEEEEEeCCEEeeecCh
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID--SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1239 rQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrIlvl~~G~ive~g~p 1315 (1343)
|||++|||||+++|++|||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999864 36899999999999976 799999999999999999
Q ss_pred hHHh
Q 000702 1316 GRLL 1319 (1343)
Q Consensus 1316 ~eLl 1319 (1343)
+++.
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 8654
No 307
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.2e-38 Score=350.70 Aligned_cols=201 Identities=23% Similarity=0.412 Sum_probs=176.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++||+++|+. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+.+ ..|+.++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 578999999999999999999999999999999999999999999999987643 46788999
Q ss_pred ecCCccccCC-chhhhcCC-CC-C-----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDP-LE-E-----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp-~~-~-----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+...+.| .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999975 99999863 11 1 12456788999999977665544 36999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecC
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~ 1314 (1343)
+++|+++||||||++||.++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998653 7899999999999865 99999999999999874
No 308
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=359.76 Aligned_cols=211 Identities=23% Similarity=0.338 Sum_probs=184.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC--------cceEEEcCeecCCCChH
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA--------CGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~--------~G~I~IdG~di~~i~l~ 1168 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999888888
Q ss_pred HHhhcceeecCCcc-ccCCchhhhcCCCC--C------C---CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCCh
Q 000702 1169 DLRSRLGIIPQDPN-LFEGTIRCNLDPLE--E------H---SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~-lF~gTIr~NLdp~~--~------~---sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
.+|+.++++||++. +|..|+++|+.... . . .++.++++++..++.+... .....|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVG-----------RDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCH
Confidence 88889999999986 57889999996421 0 1 1234677888888765432 23357999
Q ss_pred hHHHHHHHHHHHh---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEE
Q 000702 1237 GQRQLVSLGRALL---------KQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVL 1304 (1343)
Q Consensus 1237 GQrQrl~LARALL---------~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl 1304 (1343)
|||||++|||||+ .+|++|||||||++||+++...+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999997653 6899999999999864 9999999
Q ss_pred eCCEEeeecChhHHhh
Q 000702 1305 SDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1305 ~~G~ive~g~p~eLl~ 1320 (1343)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999975
No 309
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-39 Score=346.26 Aligned_cols=216 Identities=27% Similarity=0.432 Sum_probs=190.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCe---ecCCCChHHHhh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNI---DISTIGLHDLRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~---di~~i~l~~LR~ 1172 (1343)
.|+++|++..|+.- ++++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.+++..+ .+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 37788888888753 5899999999999999999999999999999999999999999999999 88775444 46
Q ss_pred cceeecCCccccC-CchhhhcCCCC---------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1173 RLGIIPQDPNLFE-GTIRCNLDPLE---------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~-gTIr~NLdp~~---------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
+||+|+|+..||. .||.+||.++- ...+..+.+.|+.++|..+-++-| .+||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 7999999999996 59999997543 123455777899999987776666 46899999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||||||...|++|+||||.++||..-.+.+++-|++... ++|+++|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999999987543 6899999999988755 9999999999999999999999
Q ss_pred hcCCcHH
Q 000702 1320 EDKSSMF 1326 (1343)
Q Consensus 1320 ~~~~~~f 1326 (1343)
..+++.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 9998877
No 310
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-39 Score=345.34 Aligned_cols=200 Identities=35% Similarity=0.489 Sum_probs=170.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.|.++|++..|. ..++++|||++|+.||++|+.|||||||||||++|+|+..|+.|.|.++|.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 477888888875 367899999999999999999999999999999999999999999999984
Q ss_pred EEEEccccccc-CccHHHHhccCCCC---------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSPM---------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~~---------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
||||+|+.-+| ..||.|||.||.+. .+.+..+.++.|+|+.--+ .....||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHHHH
Confidence 79999997765 78999999999732 2345566677777754333 345689999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCcc-ccCCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFL-PAADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|||||..+|++|+||||++|||++..+.+-. .+.... + |.|+++|||+.++. ..||+|++|++|+|...|+++|+.
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~-wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHH-HHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 9999999999999999999999999776644 343332 3 88999999999875 569999999999999999999987
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 227 ~~ 228 (345)
T COG1118 227 DH 228 (345)
T ss_pred cC
Confidence 54
No 311
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-38 Score=350.29 Aligned_cols=211 Identities=29% Similarity=0.513 Sum_probs=189.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|.. .+++++|+||++++|++++|+||||||||||+++|+|+.+|.+|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4889999999842 34699999999999999999999999999999999999999999999987 28
Q ss_pred EEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 518 AYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
+|++|+++++..|++||+.++.+ ....+..+.++.+++.+.++.+|.|+++.++....+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998754 34456667777888888889999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999887765 4555556899999999999888899999999999999999888754
No 312
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.8e-38 Score=354.48 Aligned_cols=215 Identities=27% Similarity=0.422 Sum_probs=192.4
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 449 NVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
.+.++++|++++|+. ..+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYEN-NLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCC-CCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 346999999999853 235799999999999999999999999999999999999999999999987
Q ss_pred eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCC
Q 000702 516 TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDA 595 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~ 595 (1343)
.++|++|+|+++++|++||+........+++.++++..++.+.++.+|.|+++.+++.+.+||||||||++||||++.+|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 37999999999999999999776444455667777888888889999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 596 DIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 596 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+++||||||++||+++.+.+++ .+....+++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 244 (257)
T cd03288 176 SILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ 244 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc
Confidence 9999999999999998776654 45555568999999999999888999999999999999999998764
No 313
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.6e-38 Score=338.39 Aligned_cols=193 Identities=31% Similarity=0.422 Sum_probs=158.0
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
++++|++..|..+. ..++|+++||+|++||+++|+|||||||||||++|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 56889998876432 24799999999999999999999999999999999999999999999998
Q ss_pred --eEEEEccccc-ccCccHHHHhccCCC----CC---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 --TAAYVSQSAW-IQSGNIEENILFGSP----MD---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 --~i~~v~Q~~~-l~~~ti~~Ni~~g~~----~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.+|||+|+.. +.+.|++|||.+... .. .++.++.++..+|.+.. .......|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~----------~~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRL----------LKKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhh----------ccCCchhcCHHHHHHH
Confidence 3899999965 568899999985322 11 22333333433443222 1245678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPAADFILVLKEGRII 654 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~ 654 (1343)
||||||+.+|++++.||||.+||.++++.+++.+.... ..|+|+|+|||+......|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999987654433 3489999999999999999999999999954
No 314
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=373.07 Aligned_cols=212 Identities=25% Similarity=0.403 Sum_probs=186.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----ChHHHhh
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI----GLHDLRS 1172 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~l~~LR~ 1172 (1343)
|++ |++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999742 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred cceeecCCccccC-CchhhhcCCC-CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1173 RLGIIPQDPNLFE-GTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~-gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
+++|+||++.+|. .|+++|+... ....++++.++++.+++.++..+.| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9999999999996 5999999743 2334567889999999877665543 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++..++..
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 9999999999999999999999999987654 6899999999998866 999999999999999999999987753
No 315
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.1e-38 Score=368.90 Aligned_cols=203 Identities=27% Similarity=0.437 Sum_probs=177.0
Q ss_pred EEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCcccc
Q 000702 1105 RYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLF 1184 (1343)
Q Consensus 1105 ~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF 1184 (1343)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4643 369999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred CC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1185 EG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1185 ~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
.+ |+++|+.... ..+ ++++.++++.+++.+... ..+ .+||||||||++|||||+++|++||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAAD-------RPV----GTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhC-------Cch----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999996421 112 345778889888865433 233 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 47899999999999876 999999999999999999999764
No 316
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-39 Score=364.09 Aligned_cols=202 Identities=33% Similarity=0.455 Sum_probs=173.5
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EE
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AA 518 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~ 518 (1343)
..++++|++.+|. +..+++|+||+|++||+++++|||||||||+|++|+|+..|++|+|.++|. ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 3699999999985 568999999999999999999999999999999999999999999999994 79
Q ss_pred EEccccccc-CccHHHHhccCCC----CC-H---HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 519 YVSQSAWIQ-SGNIEENILFGSP----MD-K---AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 519 ~v~Q~~~l~-~~ti~~Ni~~g~~----~~-~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
+|+|+.-|| +.||+|||.||.. .. + +++.++++..+|.+.- ..+...|||||+|||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHHHHH
Confidence 999998776 6899999999976 12 2 2455555555554422 3567789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 590 ALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEF-LPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 590 al~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||..+|+++|||||+||||.+...++-.++..... .|.|.|+|||+.+. +..+|||++|++|+|...|+++|+...
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 99999999999999999999998887666543322 39999999999975 677999999999999999999999865
No 317
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-38 Score=351.02 Aligned_cols=214 Identities=35% Similarity=0.580 Sum_probs=189.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------AA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i~ 518 (1343)
++++|++++|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 368899998842 357999999999999999999999999999999999999999999999872 79
Q ss_pred EEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 519 YVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 519 ~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
|++|++++++.|++||+.++.. ..+....+.++.+++.+.+..+|.|+++.++.++.+||||||||++|||||+.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 334455666777888888899999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcCcc
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAGTD 668 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 668 (1343)
+||||||++||+.+.+.+.+. +....+|+|+|++||+++.+..||++++|++|++++.|+.+++......
T Consensus 159 lllDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~ 228 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAA-LRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGL 228 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccH
Confidence 999999999999998877654 4444458999999999999888999999999999999999888765443
No 318
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-38 Score=350.38 Aligned_cols=213 Identities=31% Similarity=0.540 Sum_probs=189.0
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~ 518 (1343)
++++|++++|.. ..+++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPG-DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCC-CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468899999853 224799999999999999999999999999999999999999999999987 279
Q ss_pred EEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 519 YVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 519 ~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
|++|++++++.|++||+.++.. .....+.+.++.+.+.+.++.+|.|.++..+.++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 344556666777788888889999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 666 (1343)
+||||||++||+.+.+.+.+ ++....+++|+|++||+++.+..||++++|++|++++.|+.+++....
T Consensus 160 llLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 160 LILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 99999999999999877755 455555789999999999998889999999999999999998886553
No 319
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=333.75 Aligned_cols=215 Identities=26% Similarity=0.447 Sum_probs=184.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~i 1174 (1343)
-++++|++..|++. .+|+||||++++||+++++||||+|||||+++|+|+.++.+|+|.++|.||...++++ .|..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 37899999999863 6999999999999999999999999999999999999999999999999999999887 58889
Q ss_pred eeecCCccccCC-chhhhcCCCCC------CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE------HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~------~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
++|||...+|.. ||.|||..... ..+..+.++.+. .| -|.......+.+|||||+|.++||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~l---------FP-~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYEL---------FP-RLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHH---------Ch-hHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999976 99999974311 111112222221 11 23333344567899999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
|..+||+|+|||||.+|-+.--+.|.++|++..+ +.||+.|-++.....+ +||.+||++|+|+..|+++||.+++
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 9999999999999999999999999999998764 5699999999988765 9999999999999999999999764
No 320
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=347.89 Aligned_cols=202 Identities=32% Similarity=0.504 Sum_probs=175.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|++|+|+++ .++|+|+|++|++|+.++|+|+||||||||++++.|.++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 57899999998653 68999999999999999999999999999999999999999999998873
Q ss_pred EEEEcccc--cccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 AAYVSQSA--WIQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
+|||+|+| .+|..||.|.+.||.. .++ ++.+++++.|++.+.. .....+|||||||||||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcceeeHHh
Confidence 89999999 6899999999999964 333 3455666677765543 34567899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALA-NKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|.+|..+|+++|||||||+||+...+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999988887654333334 6899999999998866 999999999999999999888754
No 321
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.2e-37 Score=397.73 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=154.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHh------ccc---CCCcce------------
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALF------RLI---EPACGR------------ 1154 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~------rl~---~~~~G~------------ 1154 (1343)
.++++|++. ..|+|+||+|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 588888862 2599999999999999999999999999998764 211 122233
Q ss_pred EEEcCeecCCC---------C-hHHHhhcce---------eecCCccccC-----------CchhhhcCCCCC-------
Q 000702 1155 IIIDNIDISTI---------G-LHDLRSRLG---------IIPQDPNLFE-----------GTIRCNLDPLEE------- 1197 (1343)
Q Consensus 1155 I~IdG~di~~i---------~-l~~LR~~i~---------iVpQdp~lF~-----------gTIr~NLdp~~~------- 1197 (1343)
|.||-.+|..- + .+.+|.-.+ +-++.-.+.. |+++.|+.+..+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 33443333211 1 123344332 3233322221 455555542211
Q ss_pred -----------------CCHHH-----HHHHHHHc----CCc---hHHhcccCCCCc-ccccCCCCCChhHHHHHHHHHH
Q 000702 1198 -----------------HSDRE-----IWEALDKS----QLG---DIVRGKDQKLET-PVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1198 -----------------~sd~e-----i~~aL~~~----~L~---~~i~~lp~gLdt-~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
.+-.| +.++++.. .+. +.+.. -||+. .++.....||||||||+.|||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~--vgL~~l~l~~~~~tLSgGEkQRl~LAra 844 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVD--VGLGYIKLGQPATTLSGGEAQRVKLAKE 844 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHH--CCCCcccccCCcccCCHHHHHHHHHHHH
Confidence 11111 22222221 000 11111 14543 3456667899999999999999
Q ss_pred HhcCC---CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEE------eCCEEeeecChhH
Q 000702 1248 LLKQA---RILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVL------SDGRVAEFDTPGR 1317 (1343)
Q Consensus 1248 LL~~~---~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl------~~G~ive~g~p~e 1317 (1343)
|+++| +++||||||++||.++...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|+..|+|++
T Consensus 845 L~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~e 924 (943)
T PRK00349 845 LSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEE 924 (943)
T ss_pred HhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHH
Confidence 99999 9999999999999999999999998764 478999999999999999999999 7999999999999
Q ss_pred HhhcCCcHHHHHHH
Q 000702 1318 LLEDKSSMFLKLVT 1331 (1343)
Q Consensus 1318 Ll~~~~~~f~~l~~ 1331 (1343)
+.+++++.=.+.+.
T Consensus 925 l~~~~~s~t~~~l~ 938 (943)
T PRK00349 925 VAKVEASYTGRYLK 938 (943)
T ss_pred HHhCcccHHHHHHH
Confidence 99877665544443
No 322
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-38 Score=363.64 Aligned_cols=213 Identities=31% Similarity=0.515 Sum_probs=189.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+.+|+. ...+|+||||+|++||.+|++||||||||||+++|.|++.|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999984 23699999999999999999999999999999999999999999999999998765 678899999
Q ss_pred eecCCccccCC-chhhhcCCCC-------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPLE-------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~~-------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
|+||+|.++.. |++|||+.+. ...++.+.+.++..+|.+.- +.++ ..||+|||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHHH
Confidence 99999998876 9999997532 12356788999999997622 2333 4799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK-D-CTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998775 4 699999999999988 999999999999999999998754
No 323
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.9e-38 Score=357.89 Aligned_cols=222 Identities=23% Similarity=0.330 Sum_probs=187.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---cceEEEcCeecCCCC-----h
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA---CGRIIIDNIDISTIG-----L 1167 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~---~G~I~IdG~di~~i~-----l 1167 (1343)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999964 36999999999999999999999999999999999999986 499999999987542 3
Q ss_pred HHHhhcceeecCCccccCC-chhhhcCCCC---------------CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCC
Q 000702 1168 HDLRSRLGIIPQDPNLFEG-TIRCNLDPLE---------------EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENG 1231 (1343)
Q Consensus 1168 ~~LR~~i~iVpQdp~lF~g-TIr~NLdp~~---------------~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1231 (1343)
..+|++++|+||++.+|.+ |+++|+.... ....+++.++++..++.+.... ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 5678899999999998874 9999996321 1113457788888888655433 22
Q ss_pred CCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCE
Q 000702 1232 DNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGR 1308 (1343)
Q Consensus 1232 ~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1308 (1343)
.+||+|||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||||++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 4799999999999999999999999999999999999999999999865 37899999999998754 99999999999
Q ss_pred EeeecChhHHhhcCCcHHHHHHHHh
Q 000702 1309 VAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1309 ive~g~p~eLl~~~~~~f~~l~~~~ 1333 (1343)
+++.|+++++ . .....+++...
T Consensus 231 i~~~g~~~~~-~--~~~~~~~~~~~ 252 (262)
T PRK09984 231 VFYDGSSQQF-D--NERFDHLYRSI 252 (262)
T ss_pred EEEeCCHHHh-c--cHHHHHHHhhh
Confidence 9999999997 2 23556665543
No 324
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.1e-38 Score=346.94 Aligned_cols=206 Identities=30% Similarity=0.449 Sum_probs=186.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|+++.|+. .++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRP-NLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCC-CCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 4789999999853 235799999999999999999999999999999999999999999999987 37
Q ss_pred EEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000702 518 AYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADI 597 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~i 597 (1343)
+|++|++.+++.|++||+.+......++..+.++.+++.+.+..+|.|+++..++.+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766666777778888889888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000702 598 YLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 598 llLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 658 (1343)
+||||||++||+.+.+.+.+ .+....+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999777755 4555556799999999999988899999999999998775
No 325
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-38 Score=347.68 Aligned_cols=223 Identities=26% Similarity=0.414 Sum_probs=185.1
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC-C----CcceEEEcCeecCCCChHH
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE-P----ACGRIIIDNIDISTIGLHD 1169 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~-~----~~G~I~IdG~di~~i~l~~ 1169 (1343)
++++|+++.|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.++|.|+-+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999997543 368999999999999999999999999999999999997 3 5799999999999999876
Q ss_pred Hhh----cceeecCCccc-cCC--chhhhc----CCCCCC-C----HHHHHHHHHHcCCchH---HhcccCCCCcccccC
Q 000702 1170 LRS----RLGIIPQDPNL-FEG--TIRCNL----DPLEEH-S----DREIWEALDKSQLGDI---VRGKDQKLETPVLEN 1230 (1343)
Q Consensus 1170 LR~----~i~iVpQdp~l-F~g--TIr~NL----dp~~~~-s----d~ei~~aL~~~~L~~~---i~~lp~gLdt~v~e~ 1230 (1343)
+|+ .|++|||||.- |+- ||.+-+ ...... + .+...+.|+.+++.+- ...-|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP---------- 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP---------- 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC----------
Confidence 543 79999999942 221 333222 111111 1 3457888999998753 22223
Q ss_pred CCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCC
Q 000702 1231 GDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDG 1307 (1343)
Q Consensus 1231 G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G 1307 (1343)
..||||||||+.||-||+.+|++||-||||++||..+.+.|.+.|++.. .++|+|+|||++..+.. ||||.||.+|
T Consensus 152 -helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG 230 (316)
T COG0444 152 -HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAG 230 (316)
T ss_pred -cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECc
Confidence 5789999999999999999999999999999999999999999998766 48999999999999876 9999999999
Q ss_pred EEeeecChhHHhhcCCcHHHHHH
Q 000702 1308 RVAEFDTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1308 ~ive~g~p~eLl~~~~~~f~~l~ 1330 (1343)
+|||.|+.+++++++.--|.+..
T Consensus 231 ~iVE~g~~~~i~~~P~HPYT~~L 253 (316)
T COG0444 231 RIVEEGPVEEIFKNPKHPYTRGL 253 (316)
T ss_pred EEEEeCCHHHHhcCCCChHHHHH
Confidence 99999999999998876665444
No 326
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-38 Score=356.14 Aligned_cols=201 Identities=24% Similarity=0.311 Sum_probs=174.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+... +..++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred ecCCccccC-CchhhhcCCC---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFE-GTIRCNLDPL---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+||++.+|. .|+++|+... .... ++++.++++..++.+...+. ..+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRY-----------IWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999642 1122 24577888888886554332 257999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEe--CCEEeeecCh
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLS--DGRVAEFDTP 1315 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~--~G~ive~g~p 1315 (1343)
+++|++|||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999998863 37999999999999865 99999998 5999998764
No 327
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.4e-38 Score=314.36 Aligned_cols=198 Identities=31% Similarity=0.429 Sum_probs=169.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AAYV 520 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~~v 520 (1343)
+.++++.|+|.. .=-..+++|++||++||+||||||||||+++|+|+..|.+|+|.++|. ++.+
T Consensus 2 l~L~~V~~~y~~-----~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGH-----LPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCc-----ceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 567788998843 123578999999999999999999999999999999999999999983 7999
Q ss_pred cccccccC-ccHHHHhccCCC-------CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 521 SQSAWIQS-GNIEENILFGSP-------MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 521 ~Q~~~l~~-~ti~~Ni~~g~~-------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|+.-+|. -||++||.+|.. .+.++.+.+....+|....+.+|. +|||||||||||||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHHh
Confidence 99998884 799999999954 245667777778888888877774 79999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-hcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMT-ALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~-~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
++.+|++||||||||||.-..+....+.+. ..++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999887776543222 2258899999999998765 999999999999999999998754
No 328
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.6e-38 Score=355.06 Aligned_cols=222 Identities=24% Similarity=0.324 Sum_probs=184.1
Q ss_pred eEEEEEEEEEEcCC-------CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH
Q 000702 1096 TIELIDLKVRYGEN-------LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~-------~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~ 1168 (1343)
.|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 35699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HHhhcceeecCCcc--cc-CCchhhhcCC-C---CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1169 ---DLRSRLGIIPQDPN--LF-EGTIRCNLDP-L---EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1169 ---~LR~~i~iVpQdp~--lF-~gTIr~NLdp-~---~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
.+|+.++++||++. ++ ..|+++|+.. . ...+ .+.+.++++..++... ........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 46889999999983 43 4689999742 1 1111 2245666766666421 122334679
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|+|||||++|||||+.+|+||||||||++||.++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999987653 7899999999999975 99999999999999
Q ss_pred ecChhHHhhcCCcHHHH
Q 000702 1312 FDTPGRLLEDKSSMFLK 1328 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~~f~~ 1328 (1343)
.|+++++... ++.|..
T Consensus 233 ~g~~~~~~~~-~~~~~~ 248 (268)
T PRK10419 233 TQPVGDKLTF-SSPAGR 248 (268)
T ss_pred eCChhhccCC-CCHHHH
Confidence 9999999854 444443
No 329
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.7e-38 Score=348.61 Aligned_cols=202 Identities=26% Similarity=0.362 Sum_probs=176.6
Q ss_pred EEEEEEEEEEcCCC--CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH---HHh
Q 000702 1097 IELIDLKVRYGENL--PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH---DLR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~--~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~---~LR 1171 (1343)
++++|++++|+++. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred hcceeecCCccccC-CchhhhcCCCC----CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1172 SRLGIIPQDPNLFE-GTIRCNLDPLE----EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~-gTIr~NLdp~~----~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
+.++++||+|.+|. .|+.+|+.+.. ..+. +++.++++++++.++..+.| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999997 69999996421 2222 34677888888876665544 47999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccccCEEEEEeCCEE
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVIDSDLVLVLSDGRV 1309 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~i 1309 (1343)
+||||++++|++|+|||||++||.++...+.+.|++..+ ++|+|+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988653 7999999999997767999999999986
No 330
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.6e-38 Score=369.87 Aligned_cols=212 Identities=27% Similarity=0.416 Sum_probs=182.3
Q ss_pred EEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC----hHHHhhccee
Q 000702 1101 DLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG----LHDLRSRLGI 1176 (1343)
Q Consensus 1101 nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~----l~~LR~~i~i 1176 (1343)
|++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 24 999999999999999999999999999999999999999999999987542 3456888999
Q ss_pred ecCCccccCC-chhhhcCCC-CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1177 IPQDPNLFEG-TIRCNLDPL-EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~-~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
+||++.+|.+ |+++|+... .... ++.+.++++..++.+...+.| .+||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRLP-----------GRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCCh-----------hhCCHHHHHHHHHHHHHHc
Confidence 9999999975 999999742 1111 234778888888866554433 5799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHH
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFL 1327 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~ 1327 (1343)
+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999998653 6899999999999866 999999999999999999999987665543
No 331
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-38 Score=331.98 Aligned_cols=171 Identities=44% Similarity=0.726 Sum_probs=161.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 57899999997643469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
+||+|.+|+.|+++|+ ||+|||||++||||++++|++||
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 89999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCE
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGR 1308 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1308 (1343)
|||||++||.++...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998777799999999999998899999999985
No 332
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=8.4e-38 Score=346.66 Aligned_cols=204 Identities=26% Similarity=0.423 Sum_probs=178.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++.+++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999974 36999999999999999999999999999999999999999999999999876422 357999
Q ss_pred ecCCccccC-CchhhhcCCC---CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1177 IPQDPNLFE-GTIRCNLDPL---EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~---~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
+||++.+|. .|+++|+... ...+++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999999886 5999998632 233567788999999987654432 2479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999998764 37899999999999864 99999999999999999875
No 333
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-37 Score=343.16 Aligned_cols=193 Identities=24% Similarity=0.325 Sum_probs=149.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.+-+.||+|.|+.. .|.+++++|-|.--.+|+||||+|.|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gq-kpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQ-KPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCC-CchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 46789999999765 468999999999999999999999999999999999999999976432 255688
Q ss_pred eecCCcc--c-cCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1176 IIPQDPN--L-FEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1176 iVpQdp~--l-F~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
..-|... | -..|--+.|.-.-..+-++-..+|...||....... .+ ..||||||-|+++|-.-++.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTi------ki----kdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTI------KI----KDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceE------ee----eecCCcchHHHHHHHHhcCCC
Confidence 8888763 1 122444444321223456677888888775543221 11 469999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCE-EEEEeCCEEeee
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDL-VLVLSDGRVAEF 1312 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~Dr-Ilvl~~G~ive~ 1312 (1343)
+||||||||.+||.++-..+-++|+++ +..||+|+|+-..|..-|. .+|+++-.|-|.
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhc
Confidence 999999999999999999999999876 3479999999988876553 566666555443
No 334
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.1e-37 Score=350.23 Aligned_cols=222 Identities=21% Similarity=0.364 Sum_probs=182.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCee-----cCCCChHH-
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNID-----ISTIGLHD- 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~d-----i~~i~l~~- 1169 (1343)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999974 358999999999999999999999999999999999999999999999988 77766553
Q ss_pred ---HhhcceeecCCccc---cCCchhhhcCC----CCC----CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCC
Q 000702 1170 ---LRSRLGIIPQDPNL---FEGTIRCNLDP----LEE----HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWS 1235 (1343)
Q Consensus 1170 ---LR~~i~iVpQdp~l---F~gTIr~NLdp----~~~----~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1235 (1343)
+++.++++||+|.. +..|+.+|+.. +.. ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 34679999999852 23477778631 111 12345666677766642 11223346899
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeee
Q 000702 1236 VGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEF 1312 (1343)
Q Consensus 1236 gGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~ 1312 (1343)
||||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999985 999999999999999
Q ss_pred cChhHHhhcCCcHHHHH
Q 000702 1313 DTPGRLLEDKSSMFLKL 1329 (1343)
Q Consensus 1313 g~p~eLl~~~~~~f~~l 1329 (1343)
|+++++..++...|.++
T Consensus 231 ~~~~~~~~~~~~~~~~~ 247 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQL 247 (253)
T ss_pred CCHHHHhcCCCCHHHHH
Confidence 99999987655445443
No 335
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=327.66 Aligned_cols=205 Identities=24% Similarity=0.423 Sum_probs=168.8
Q ss_pred eEEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000702 451 AIQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------- 516 (1343)
.++++|+++.|.... -.++|+||||++.+||+.+|+|+||||||||.++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 588999999985321 014999999999999999999999999999999999999999999999982
Q ss_pred -EEEEcccccc---cCccHHHHhccC-----CCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 -AAYVSQSAWI---QSGNIEENILFG-----SPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 -i~~v~Q~~~l---~~~ti~~Ni~~g-----~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
|.+|+|||.- ..-||++-|.=+ .+-.+.+..++++..+|.... .......|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHHHH
Confidence 7899999973 346777766422 112234466666666665432 234567899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||||..+|+++|||||||+||+.+...|++-+.+.. ..+-|.|+|||++..+.+ ||||.||++|++++.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999987544322 246799999999999886 999999999999999999998765
No 336
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=7.7e-37 Score=342.11 Aligned_cols=176 Identities=29% Similarity=0.420 Sum_probs=130.3
Q ss_pred EecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCcc-ccCCchhhhcCCCC--
Q 000702 1120 AFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPN-LFEGTIRCNLDPLE-- 1196 (1343)
Q Consensus 1120 ~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~-lF~gTIr~NLdp~~-- 1196 (1343)
+|..||.+||+||||-||||++++|.|.++|++|+ ..+ -+++|=||--. -|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 35567899999999999999999999999999998 222 24888888542 38899987663111
Q ss_pred CCCHHHHH-HHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000702 1197 EHSDREIW-EALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKI 1275 (1343)
Q Consensus 1197 ~~sd~ei~-~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~ 1275 (1343)
.+.+.-.+ +..+-.+|.+. +|.+| .+|||||.||++||-||.+++++.+||||+|.||.+-.-.+-++
T Consensus 429 ~~~~s~~~~ei~~pl~l~~i-------~e~~v----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVKPLNLEDL-------LERPV----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcCccchHHH-------Hhccc----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 11111111 12222333222 33344 57999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEeccCcccccc-cCEEEEEeC--CEEeeecChhHHhh
Q 000702 1276 IRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSD--GRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1276 l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~--G~ive~g~p~eLl~ 1320 (1343)
||+.. .++|.++|-|++-.+.. +||++|++. |+=-.-..|..+.+
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr~ 547 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMRE 547 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHHH
Confidence 98744 56899999999998865 999999983 32223335666654
No 337
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-37 Score=347.89 Aligned_cols=208 Identities=29% Similarity=0.446 Sum_probs=181.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999974 3599999999999999999999999999999999999999999999987 34799
Q ss_pred eecCCccccC---CchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1176 IIPQDPNLFE---GTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1176 iVpQdp~lF~---gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
|+||+|.++. .|+++|+......+++++.++++.+++.+..... ...||||||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAP-----------MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 3889987543345677899999999997765432 2579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHHHH
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKL 1329 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~l 1329 (1343)
++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.. +..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~--~~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL--HPEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC--CHHHHHH
Confidence 99999999999999999999999987643 7899999999999865 999999965 7999999999874 3556665
Q ss_pred H
Q 000702 1330 V 1330 (1343)
Q Consensus 1330 ~ 1330 (1343)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 5
No 338
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=331.36 Aligned_cols=170 Identities=32% Similarity=0.565 Sum_probs=157.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+.. ++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4789999999743 5999999999999999999999999999999999999999999999999998765 677889999
Q ss_pred ecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999987 9999973 8999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEEEEeCCEE
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVLVLSDGRV 1309 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~i 1309 (1343)
||||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+. .||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999864 3689999999999887 4999999999974
No 339
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=358.43 Aligned_cols=209 Identities=26% Similarity=0.409 Sum_probs=170.2
Q ss_pred ceEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------
Q 000702 450 VAIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------ 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------ 515 (1343)
..++++|++|+|.... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999985321 24799999999999999999999999999999999999999999999875
Q ss_pred -----------------eEEEEcccc--cccCccHHHHhccCCC---CCHHHHHHHHHHhhhhhhHhhccCCCc-cccCC
Q 000702 516 -----------------TAAYVSQSA--WIQSGNIEENILFGSP---MDKAKYKKVIHACSLKKDLELFSHGDQ-TIIGD 572 (1343)
Q Consensus 516 -----------------~i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~-t~ig~ 572 (1343)
.++||+|+| ++++.||+|||.|+.. .+.+...+.. . +.++.+ |.. ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~--~---~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLA--K---FYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHH--H---HHHHHc--CCChhHhcC
Confidence 268999998 7899999999998742 2222221111 1 112222 222 34567
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCC
Q 000702 573 RGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEG 651 (1343)
Q Consensus 573 ~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G 651 (1343)
.+.+||||||||++|||||+.+|+++||||||++||+.+.+.+++.+.....+|+|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 88999999999999999999999999999999999999988887644332345899999999999874 59999999999
Q ss_pred eEEEecChHHHHhc
Q 000702 652 RIIQAGKYDDLLQA 665 (1343)
Q Consensus 652 ~i~~~g~~~~l~~~ 665 (1343)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999998653
No 340
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.2e-37 Score=362.08 Aligned_cols=202 Identities=26% Similarity=0.385 Sum_probs=168.6
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
|+++|++++|+.++ ..++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999985322 34799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 -TAAYVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++|++|++.++. .|++||+.|+.. .+.+ +..++++..++.+ ........|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~-----------~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGD-----------KHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHH
Confidence 3799999998884 799999998642 2222 2233333333322 234566789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|||||+.+|+++|||||||+||+.+.+.+++. ++.+ . .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999888764 4443 2 38999999999999865 9999999999999999999987
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 341
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.4e-37 Score=340.34 Aligned_cols=205 Identities=36% Similarity=0.578 Sum_probs=181.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|+++.|.. ..+++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 4789999999842 235799999999999999999999999999999999999999999999987 37
Q ss_pred EEEcccccccCccHHHHhccCCC-CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 518 AYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~-~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
+|++|+++++..|++||+.++.. .++++..+.++.+++.+.++..|.|++|.+.+...+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999988999999988754 34556677888888888888999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAG 657 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g 657 (1343)
++||||||++||+.+.+.+.+. +....+++|+|++||+++.+..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~-l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKER-LRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999998877654 55554458999999999988779999999999998654
No 342
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-38 Score=326.53 Aligned_cols=204 Identities=30% Similarity=0.430 Sum_probs=170.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
.|+++|++..|+ +++.+|+||||+|++||.++|+|+|||||||||++|.|..+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 589999999986 357899999999999999999999999999999999999999999999988
Q ss_pred -eEEEEcccccc-cCccHHHHhccCCC------------CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 -TAAYVSQSAWI-QSGNIEENILFGSP------------MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 -~i~~v~Q~~~l-~~~ti~~Ni~~g~~------------~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.+||++|++-| ...||.+|++.|.- ++++....++++.. .+ |.....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLe---rv-----gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALE---RV-----GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHH---Hc-----CcHHHHHHHhccCCcch
Confidence 38999999775 57899999997742 33444444443321 11 11122235678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-hcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecCh
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMT-ALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKY 659 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~-~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~ 659 (1343)
+|||+|||||+++|++++-|||+|+|||.+++++++.+.+. ...|.|+|+.-|++++.. .||||+-|++|+|+++|+.
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 99999999999999999999999999999999998765443 235899999999999875 5999999999999999999
Q ss_pred HHHHh
Q 000702 660 DDLLQ 664 (1343)
Q Consensus 660 ~~l~~ 664 (1343)
+|+-+
T Consensus 233 ~el~~ 237 (258)
T COG3638 233 SELTD 237 (258)
T ss_pred hhhhH
Confidence 88643
No 343
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-37 Score=331.72 Aligned_cols=172 Identities=35% Similarity=0.560 Sum_probs=159.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCC--hHHHhhcc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIG--LHDLRSRL 1174 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~--l~~LR~~i 1174 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred eeecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998743 89999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCE
Q 000702 1254 ILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGR 1308 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1308 (1343)
++||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999987654 5899999999999985 99999999985
No 344
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2.2e-37 Score=336.79 Aligned_cols=185 Identities=26% Similarity=0.344 Sum_probs=163.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcc--cCCCcceEEEcCeecCCCChHHH-hhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRL--IEPACGRIIIDNIDISTIGLHDL-RSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl--~~~~~G~I~IdG~di~~i~l~~L-R~~ 1173 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999974 3699999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred ceeecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
++|+||+|.+|.+ |+++|+ .. ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l------------------------~~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFL------------------------RY-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHH------------------------hh-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999876 555554 00 01369999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCccccc--ccCEEEEEeCCEEeeecChhHHh
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVI--DSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~--~~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
+||+|||||++||.++...+.+.|++..+ ++|+|++||+++.+. .||||++|++|++++.| +.|+.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999987643 789999999999988 59999999999999999 66565
No 345
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-37 Score=362.55 Aligned_cols=202 Identities=26% Similarity=0.383 Sum_probs=169.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~~ 519 (1343)
.++++|++++|.. ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999832 357999999999999999999999999999999999999999999999983 899
Q ss_pred Eccccccc-CccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQ-SGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~-~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
|+|++.+| +.||+|||.|+.. .+. ++.+++++.+++.+. ......+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPL-----------LDRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 99999998 5799999999853 222 233444444454432 3345678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+.+|+++|||||||+||+.+.+.+.+.+..... .|.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999998888765433222 3899999999998765 5999999999999999999998754
No 346
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2e-37 Score=344.21 Aligned_cols=203 Identities=23% Similarity=0.311 Sum_probs=169.4
Q ss_pred EEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC---CCcceEEEcCeecCCCChHHHh
Q 000702 1097 IELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE---PACGRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~l~~LR 1171 (1343)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 6799999999765 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred hcceeecCCccccCC-chhhhcCCC---C--CCCHH-----HHHH-HHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1172 SRLGIIPQDPNLFEG-TIRCNLDPL---E--EHSDR-----EIWE-ALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~g-TIr~NLdp~---~--~~sd~-----ei~~-aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
++++++||++.+|.+ |+++|+... . ...++ .+.+ .++..++.+. ......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRI-----------GGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhh-----------hcccccCcCHHHH
Confidence 899999999999987 999999632 1 11111 1222 3444444322 2223468999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCc-ccc-cccCEEEEEeCCEEeeec
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRI-PTV-IDSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~~DrIlvl~~G~ive~g 1313 (1343)
||++||||++++|++|||||||++||+.+...+.+.|++.. +++|+|+++|++ ..+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998764 368999999998 355 559999999999999875
No 347
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=351.87 Aligned_cols=209 Identities=23% Similarity=0.342 Sum_probs=176.2
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.|+++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 59999999999633 469999999999999999999999999999999999999999999999998752 11234699
Q ss_pred eecCCccc---cCCchhhhcCCC--------C---CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1176 IIPQDPNL---FEGTIRCNLDPL--------E---EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1176 iVpQdp~l---F~gTIr~NLdp~--------~---~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
|+||+|.+ +..++++|+... . ...++.+.++++..++.+... +.+ .+||||||||
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-------~~~----~~LSgG~~qr 150 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRH-------RQI----GELSGGQKKR 150 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhc-------CCc----ccCCHHHHHH
Confidence 99999865 456788887521 0 112345677889998876543 333 4699999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++.
T Consensus 151 v~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 151 VFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 999999999999999999999999999999999998764 37899999999998855 9999777 89999999999986
Q ss_pred h
Q 000702 1320 E 1320 (1343)
Q Consensus 1320 ~ 1320 (1343)
+
T Consensus 230 ~ 230 (272)
T PRK15056 230 T 230 (272)
T ss_pred C
Confidence 4
No 348
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-38 Score=316.86 Aligned_cols=213 Identities=28% Similarity=0.401 Sum_probs=185.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+.+-+ ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999987 334899999999999999999999999999999999999999999999999998854 667999999
Q ss_pred ecCCccccCC-chhhhcCCCC---CCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1177 IPQDPNLFEG-TIRCNLDPLE---EHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1177 VpQdp~lF~g-TIr~NLdp~~---~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
++-+.-++.. |.||||.+|. +.++. ++.+.-++.++.+... ..+ .+||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-------rRv----~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-------RRV----GEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-------HHH----hhhchhhHHHHHHHHHH
Confidence 9977667754 9999998764 23333 4555566666666653 344 36999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
.++|+|+|||||||+||.-|...+++.|+.... +++||+-+|-++.+. -||||+++++|+++..|+++++.+..
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999999999987665 899999999999998 59999999999999999999998753
No 349
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=337.42 Aligned_cols=190 Identities=26% Similarity=0.294 Sum_probs=161.8
Q ss_pred eEEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccC---CCcceEEEcCeecCCCChHHH
Q 000702 1096 TIELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIE---PACGRIIIDNIDISTIGLHDL 1170 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~---~~~G~I~IdG~di~~i~l~~L 1170 (1343)
.+.++||+|.|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998765 456
Q ss_pred hhcceeecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHh
Q 000702 1171 RSRLGIIPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALL 1249 (1343)
Q Consensus 1171 R~~i~iVpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL 1249 (1343)
|++++|+||++.+|.+ |+++|+...... . .+.. ...||+|||||++||||++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~~~~----~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------GNEF----VRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------cccc----hhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 2222 2579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEec-cCccccc-ccCEEEEEeCCEEeeec
Q 000702 1250 KQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIA-HRIPTVI-DSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1250 ~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~Ia-Hrl~ti~-~~DrIlvl~~G~ive~g 1313 (1343)
++|++|||||||++||+++.+.+.+.|++..+ ++|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998654 46766655 5556664 59999999999998865
No 350
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.4e-37 Score=334.68 Aligned_cols=182 Identities=27% Similarity=0.385 Sum_probs=161.2
Q ss_pred eEEEEEEEEEEcCC----CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhccc--CCCcceEEEcCeecCCCChHH
Q 000702 1096 TIELIDLKVRYGEN----LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLI--EPACGRIIIDNIDISTIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~----~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~l~~ 1169 (1343)
.|+++||+++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhhcceeecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHH
Q 000702 1170 LRSRLGIIPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRAL 1248 (1343)
Q Consensus 1170 LR~~i~iVpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARAL 1248 (1343)
+|++++++||++.+|.+ |+++|+.... ... .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 9999984210 000 6999999999999999
Q ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcc-ccc-ccCEEEEEeCCEEeeec
Q 000702 1249 LKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIP-TVI-DSDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1249 L~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~-ti~-~~DrIlvl~~G~ive~g 1313 (1343)
+++|++|||||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+. .||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 3789999999997 454 49999999999998764
No 351
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-38 Score=321.51 Aligned_cols=216 Identities=25% Similarity=0.435 Sum_probs=184.9
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSR 1173 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~ 1173 (1343)
+.+..+|+..+|... +|.++|||++++||.||+.||+||||||.+..+.|++.|++|+|.+||.||+.+|++. -|-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 458889999999754 6999999999999999999999999999999999999999999999999999999987 5778
Q ss_pred ceeecCCccccCC-chhhhcCCCCCC---------CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPLEEH---------SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~~~~---------sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
|||+||+|.+|.+ ||++||...-+. ..+++.+.|+..++...- ...|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr-----------~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLR-----------DSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHh-----------cCcccccccchHHHHH
Confidence 9999999999987 999999632211 112344555655554322 1235689999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcc-cccccCEEEEEeCCEEeeecChhHHhhc
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIP-TVIDSDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~-ti~~~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
|||||..+|+.++||||.|++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|+|+.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998654 3668998999975 5666999999999999999999999987
Q ss_pred CC
Q 000702 1322 KS 1323 (1343)
Q Consensus 1322 ~~ 1323 (1343)
+.
T Consensus 230 ~~ 231 (243)
T COG1137 230 ED 231 (243)
T ss_pred hh
Confidence 53
No 352
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=340.49 Aligned_cols=199 Identities=26% Similarity=0.357 Sum_probs=170.0
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----ChHHHhhc
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI----GLHDLRSR 1173 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i----~l~~LR~~ 1173 (1343)
++ ||+++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999763 34 99999999 99999999999999999999999999999999999998643 23457889
Q ss_pred ceeecCCccccC-CchhhhcCCC-CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1174 LGIIPQDPNLFE-GTIRCNLDPL-EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1174 i~iVpQdp~lF~-gTIr~NLdp~-~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
++|+||++.+|. .|+++|+... ..+ .++++.++++..++.+.... ...+||||||||++||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 145 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLNR-----------YPAQLSGGEKQRVALARA 145 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhhc-----------CcccCCHHHHHHHHHHHH
Confidence 999999999986 4999999642 111 23457778888877654432 335799999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
++++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 146 LAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987643 7899999999999865 9999999999998875
No 353
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-37 Score=343.91 Aligned_cols=199 Identities=32% Similarity=0.416 Sum_probs=164.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------- 515 (1343)
++++|+++.|. ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46889999984 35799999999999999999999999999999999999999999999876
Q ss_pred eEEEEcccccccCc-cHHHHhccCCC----CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 TAAYVSQSAWIQSG-NIEENILFGSP----MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~~-ti~~Ni~~g~~----~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++|++|++.++.. |++||+.++.. .+.+ +..++++.+++. ........+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-----------GAEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHH
Confidence 27999999988775 99999988632 2222 222333333332 2234556789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
||||++.+|+++||||||++||+.+.+.+.+. +.... .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999999998887654 44432 38999999999998765 9999999999999999998876
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 43
No 354
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.4e-37 Score=329.70 Aligned_cols=177 Identities=32% Similarity=0.540 Sum_probs=161.2
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999975 3699999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEE
Q 000702 1178 PQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVL 1257 (1343)
Q Consensus 1178 pQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlL 1257 (1343)
|| +++.+++.++..+ ...+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7788888766543 2357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1258 DEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1258 DEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999987654 6899999999999854 9999999999998754
No 355
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.7e-37 Score=346.13 Aligned_cols=211 Identities=20% Similarity=0.236 Sum_probs=178.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcc--cCCCcceEEEcCeecCCCChHHHhh-
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRL--IEPACGRIIIDNIDISTIGLHDLRS- 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl--~~~~~G~I~IdG~di~~i~l~~LR~- 1172 (1343)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++....++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999974 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred cceeecCCccccCC-chhhhcCCC-C---------CCC----HHHHHHHHHHcCCch-HHhcccCCCCcccccCCCCCCh
Q 000702 1173 RLGIIPQDPNLFEG-TIRCNLDPL-E---------EHS----DREIWEALDKSQLGD-IVRGKDQKLETPVLENGDNWSV 1236 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~g-TIr~NLdp~-~---------~~s----d~ei~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSg 1236 (1343)
.++++||+|.+|.+ |+++|+... . +.+ .+.+.++|+.+++.+ .. +..+. ..|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~---~~LSg 154 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFL-------SRNVN---EGFSG 154 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhh-------ccccc---cCCCH
Confidence 58899999999986 788887421 1 011 134567788888752 22 22221 24999
Q ss_pred hHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc--cCEEEEEeCCEEeeec
Q 000702 1237 GQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID--SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1237 GQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--~DrIlvl~~G~ive~g 1313 (1343)
|||||++||||++++|+||||||||++||.++...+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~ 234 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTG 234 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999998764 47899999999999875 8999999999999999
Q ss_pred ChhHH
Q 000702 1314 TPGRL 1318 (1343)
Q Consensus 1314 ~p~eL 1318 (1343)
+|+++
T Consensus 235 ~~~~~ 239 (252)
T CHL00131 235 DAELA 239 (252)
T ss_pred Chhhh
Confidence 99843
No 356
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=2.5e-37 Score=331.29 Aligned_cols=172 Identities=28% Similarity=0.467 Sum_probs=156.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh-HHHhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL-HDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l-~~LR~~i 1174 (1343)
.|+++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988864 4568899
Q ss_pred eeecCCc----cccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1175 GIIPQDP----NLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1175 ~iVpQdp----~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
+|+||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864211 89999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEE
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRV 1309 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~i 1309 (1343)
+|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999764 47899999999999877 999999999975
No 357
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=5.2e-37 Score=323.34 Aligned_cols=164 Identities=30% Similarity=0.399 Sum_probs=150.6
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999983 67999
Q ss_pred ecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEE
Q 000702 1177 IPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILV 1256 (1343)
Q Consensus 1177 VpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILl 1256 (1343)
+||+|.++++|+++|+... ....||+|||||++||||++++|++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999642 125799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccccCEEEEEeCCE
Q 000702 1257 LDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGR 1308 (1343)
Q Consensus 1257 LDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1308 (1343)
|||||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999976 589999999998888899999999763
No 358
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3e-37 Score=360.46 Aligned_cols=192 Identities=28% Similarity=0.414 Sum_probs=161.9
Q ss_pred CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------------eEEEEcccccccC
Q 000702 466 SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------------TAAYVSQSAWIQS 528 (1343)
Q Consensus 466 ~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------------~i~~v~Q~~~l~~ 528 (1343)
++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++++|+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 46799999999999999999999999999999999999999999999987 3899999999986
Q ss_pred -ccHHHHhccCCCC---CH-HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 000702 529 -GNIEENILFGSPM---DK-AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDP 603 (1343)
Q Consensus 529 -~ti~~Ni~~g~~~---~~-~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep 603 (1343)
.||+|||.|+.++ +. +..+++.+.+... |.....+....+|||||||||+|||||+.+|+++|||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v--------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLV--------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc--------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 5999999987542 22 2333333333221 223345567789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCcc-ccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 604 FSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFL-PAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 604 ~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||+||+.+.+++.+.+..... .++|+|+|||+++.+ ..||+|++|++|++++.|++++++.+
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999998876654433 489999999999976 45999999999999999999998765
No 359
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.1e-37 Score=309.76 Aligned_cols=193 Identities=26% Similarity=0.429 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------- 515 (1343)
|+|+||+..|+. ++++|+||||+|++||++-++||||||||||+|+|.|+..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 789999999864 36799999999999999999999999999999999999999999999988
Q ss_pred eEEEEccccc-ccCccHHHHhccCCCC---CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 TAAYVSQSAW-IQSGNIEENILFGSPM---DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 ~i~~v~Q~~~-l~~~ti~~Ni~~g~~~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
+||+|+||.- +.+-||.||++|.... .+ ++..++++..+|.+-...+| ..|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 4899999965 5688999999997542 22 34455666777776666666 4799999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
|||+..+|++||-||||-+|||..+..|++.+-.-...|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999987544444569999999999999876 5789999999998653
No 360
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.4e-37 Score=338.96 Aligned_cols=193 Identities=26% Similarity=0.371 Sum_probs=165.8
Q ss_pred EEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh----HHHhhcc
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL----HDLRSRL 1174 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l----~~LR~~i 1174 (1343)
++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++.++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999974 369999999999999999999999999999999999999999999999999875542 2467789
Q ss_pred eeecCCccccC-CchhhhcCCC---C----CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFE-GTIRCNLDPL---E----EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~-gTIr~NLdp~---~----~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+++||+|.+|. .|+++|+... . ...++++.++++..++.+...+ . ..+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQ-------K----IYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcC-------C----hhhCCHHHHHHHHHHH
Confidence 99999999997 6999999641 1 1124557788888888654332 2 2579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEE
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVL 1304 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl 1304 (1343)
||+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999998864 378999999999988789999985
No 361
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-37 Score=333.45 Aligned_cols=181 Identities=22% Similarity=0.316 Sum_probs=160.2
Q ss_pred eEEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhccc--CCCcceEEEcCeecCCCChHHHh
Q 000702 1096 TIELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLI--EPACGRIIIDNIDISTIGLHDLR 1171 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~l~~LR 1171 (1343)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999752 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred hcceeecCCccccCC-chhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1172 SRLGIIPQDPNLFEG-TIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1172 ~~i~iVpQdp~lF~g-TIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
++++++||+|.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998621 0000 699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccc-c-cccCEEEEEeC-CEEeeec
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPT-V-IDSDLVLVLSD-GRVAEFD 1313 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~~DrIlvl~~-G~ive~g 1313 (1343)
+|++|+|||||+++|.++...+.+.|++.. +++|+|+|||+++. + ..||||++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999764 37899999999984 4 56999999999 9999875
No 362
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.4e-37 Score=360.60 Aligned_cols=226 Identities=26% Similarity=0.387 Sum_probs=191.1
Q ss_pred eEEEEEEEEEEcCCCC--cccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC----cceEEEcCeecCCCChHH
Q 000702 1096 TIELIDLKVRYGENLP--LVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPA----CGRIIIDNIDISTIGLHD 1169 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~--~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~----~G~I~IdG~di~~i~l~~ 1169 (1343)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6999999999975433 5999999999999999999999999999999999999987 899999999999998776
Q ss_pred Hh----hcceeecCCcc-ccCC--chhhhcC----CCC----CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1170 LR----SRLGIIPQDPN-LFEG--TIRCNLD----PLE----EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1170 LR----~~i~iVpQdp~-lF~g--TIr~NLd----p~~----~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
+| ++|++|||||. .++. ||.+-+. ... +...++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 54 47999999995 4543 5554442 111 1123457888999998765443 1123579
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|||||||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .+.++|+|||++..+.+ ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999866 57899999999999987 99999999999999
Q ss_pred ecChhHHhhcCCcHHHHHH
Q 000702 1312 FDTPGRLLEDKSSMFLKLV 1330 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~~f~~l~ 1330 (1343)
.|+++++++++.--|.+..
T Consensus 236 ~G~~~~i~~~p~hpYT~~L 254 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGL 254 (539)
T ss_pred ecCHHHHHhccCCcccHHH
Confidence 9999999998876665444
No 363
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.9e-37 Score=303.36 Aligned_cols=197 Identities=28% Similarity=0.428 Sum_probs=175.2
Q ss_pred EEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCcccc
Q 000702 1105 RYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLF 1184 (1343)
Q Consensus 1105 ~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF 1184 (1343)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+..|++|+++..|.|+++++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46556667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhcC-CC---C-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeC
Q 000702 1185 EGTIRCNLD-PL---E-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDE 1259 (1343)
Q Consensus 1185 ~gTIr~NLd-p~---~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDE 1259 (1343)
.+||.+||- |. + ..+.+.-.+-|+++++.+.+. +.++ .+||||||||++|+|-|---|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~L------~k~i----t~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSIL------TKNI----TELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCchhhh------cchh----hhccchHHHHHHHHHHhhcCCceEEecC
Confidence 999999996 43 2 233344567788888877653 2333 6899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCccc-ccccCEEEEEeCCEEee
Q 000702 1260 ATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPT-VIDSDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1260 aTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~t-i~~~DrIlvl~~G~ive 1311 (1343)
+||+||+.+.+.|.+.|..++ ++..++.|||+-+. +..+||++-+..|++-|
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 999999999999999999988 46799999999987 88899999999998644
No 364
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-37 Score=350.43 Aligned_cols=204 Identities=27% Similarity=0.466 Sum_probs=168.9
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
.++++|+++.|+... .+++|+||||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999985322 24799999999999999999999999999999999999999999999877
Q ss_pred --eEEEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 --TAAYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 --~i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++||+|+| .+++.|++|||.|+.. .+++ +.+++++.+++. +.+........||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHH
Confidence 269999998 5778999999998642 2322 233344444442 1123456678999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
++|||||+.+|+++||||||++||+.+...+++. +..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999998887654 54433 3899999999999875 599999999999999999998
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+.+
T Consensus 232 ~~~ 234 (287)
T PRK13637 232 VFK 234 (287)
T ss_pred HHh
Confidence 764
No 365
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-37 Score=357.66 Aligned_cols=200 Identities=26% Similarity=0.393 Sum_probs=168.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~ 519 (1343)
.++++|+++.|. +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999984 35799999999999999999999999999999999999999999999988 3799
Q ss_pred EcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
|+|++.+|. .||+|||.|+.. .++. +.+++++..++. ........+|||||||||+|||||
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~-----------~~~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLA-----------GFEDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999885 699999999843 2222 223333333332 223456678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+.+|+++|||||||+||+.+.+.+.+. ++.+. .|+|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998887664 44433 2899999999999864 5999999999999999999998754
No 366
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-37 Score=350.32 Aligned_cols=202 Identities=27% Similarity=0.464 Sum_probs=168.2
Q ss_pred EEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000702 452 IQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------- 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------- 516 (1343)
++++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996322 136999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 517 ----AAYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 517 ----i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
++||+|+| .++..||.||+.|+.. .+.+ ++.++++..++..+ .......+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~----------~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADE----------FWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hccCCcccCCHHHHH
Confidence 69999998 7888999999998743 2222 23334444444221 234567899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
|++|||||+.+|+++||||||++||+.+.+.+.+. +..+ .+|+|+|++||+++.+. .||+|++|++|+++++|++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999998877654 4443 35899999999999875 599999999999999999999
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+..
T Consensus 231 ~~~ 233 (288)
T PRK13643 231 VFQ 233 (288)
T ss_pred HHc
Confidence 864
No 367
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.6e-36 Score=335.21 Aligned_cols=198 Identities=46% Similarity=0.842 Sum_probs=176.9
Q ss_pred EEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------------
Q 000702 453 QIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG----------------- 515 (1343)
Q Consensus 453 ~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g----------------- 515 (1343)
.+.|+.|.|++ ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 46788999864 35799999999999999999999999999999999999999999999865
Q ss_pred eEEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCC
Q 000702 516 TAAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDA 595 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~ 595 (1343)
.++|++|+|.+++.|++||+.++.+.+.++.+++++++++.+.++.+|.|+++.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 37999999999999999999998766666677888899988888889999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHH-HHHHhc-CCcEEEEEecCCCccccCCEEEEEeCCe
Q 000702 596 DIYLLDDPFSAVDAHTGSELFKE-YIMTAL-ANKTVIFVTHQVEFLPAADFILVLKEGR 652 (1343)
Q Consensus 596 ~illLDep~s~lD~~~~~~i~~~-~~~~~~-~~~t~i~vtH~~~~l~~~d~i~~l~~G~ 652 (1343)
+++||||||++||+.+.+.+.+. +++... +|+|+|++||+.+.+..||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999998877663 444332 4799999999999888899999999884
No 368
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=349.90 Aligned_cols=202 Identities=27% Similarity=0.437 Sum_probs=168.5
Q ss_pred EEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000702 452 IQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------- 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------- 516 (1343)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999995322 246999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 517 ----AAYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 517 ----i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
++||+|+| .+++.||+|||.|+.. .+.+ +.+++++.++|..++ ...+..+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 79999998 5888999999998732 2222 334445555443221 23566789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|++|||||+.+|+++||||||++||+.+...+++. ++.+ . .|.|+|++||+++.+. .||+|++|++|+++++|+.+
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998887654 4443 3 3899999999999875 59999999999999999999
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++.+
T Consensus 232 ~~~~ 235 (290)
T PRK13634 232 EIFA 235 (290)
T ss_pred HHhc
Confidence 8864
No 369
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1e-36 Score=342.77 Aligned_cols=205 Identities=21% Similarity=0.312 Sum_probs=175.9
Q ss_pred EEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceee
Q 000702 1098 ELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGII 1177 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iV 1177 (1343)
+++||++. .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEEe
Confidence 56778875 27999999999999999999999999999999999986 599999999999988888888899999
Q ss_pred cCCcc-ccCCchhhhcCCCCC--CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1178 PQDPN-LFEGTIRCNLDPLEE--HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1178 pQdp~-lF~gTIr~NLdp~~~--~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
||+|. .+..|+++|+..... .+ .+++.++++..++.+...+ ....||+|||||++|||||++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKLGR-----------SVNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhc
Confidence 99985 456799999975321 11 2356778888887654332 235799999999999999997
Q ss_pred -------CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1251 -------QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1251 -------~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999998764 47899999999997755 99999999999999999999875
No 370
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=8.6e-37 Score=339.96 Aligned_cols=206 Identities=25% Similarity=0.344 Sum_probs=171.1
Q ss_pred ccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC----CcceEEEcCeecCCCChHHHhhcceeecCCcc-ccC--
Q 000702 1113 VLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP----ACGRIIIDNIDISTIGLHDLRSRLGIIPQDPN-LFE-- 1185 (1343)
Q Consensus 1113 vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~----~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~-lF~-- 1185 (1343)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred CchhhhcCC----CCC---CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEe
Q 000702 1186 GTIRCNLDP----LEE---HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLD 1258 (1343)
Q Consensus 1186 gTIr~NLdp----~~~---~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLD 1258 (1343)
-|+.+|+.. ... ..++++.++++..++.+. +........+||||||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488887631 111 123457888998888631 01122233579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCcHHHH
Q 000702 1259 EATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSSMFLK 1328 (1343)
Q Consensus 1259 EaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~~f~~ 1328 (1343)
|||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++...+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998653 6899999999999865 9999999999999999999998765555554
No 371
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=348.33 Aligned_cols=203 Identities=27% Similarity=0.402 Sum_probs=169.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|+....+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999998543235699999999999999999999999999999999999999999999988 37
Q ss_pred EEEccccc--ccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSAW--IQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+|. ++..||+|||.|+.. .++ ++..++++..++... ......+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDF-----------KEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHHHHHH
Confidence 99999984 567899999998742 222 234445555555432 3345578999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||++.+|+++||||||++||+.+.+.+++. +..+. .|+|+|++||+++.+..||+|++|++|+++..|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999998877654 44433 38999999999998877999999999999999999887653
No 372
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=326.32 Aligned_cols=214 Identities=26% Similarity=0.419 Sum_probs=187.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i 1174 (1343)
-++.+|++.+|+.- .+++||||++++||++|++|||||||||++|++.|+|+|++|+|.++|.||..++.+.. |..|
T Consensus 4 lL~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi 81 (250)
T COG0411 4 LLEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGI 81 (250)
T ss_pred eeeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccc
Confidence 36789999999753 59999999999999999999999999999999999999999999999999999998884 6678
Q ss_pred eeecCCccccCC-chhhhcCCCCC-------------C--C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCC
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE-------------H--S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~-------------~--s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1234 (1343)
+--+|.+-+|++ |+-||+..... + . .++-.+.|+.++|.+.... ...+|
T Consensus 82 ~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~-----------~A~~L 150 (250)
T COG0411 82 ARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADR-----------PAGNL 150 (250)
T ss_pred eeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcc-----------hhhcC
Confidence 888999999987 99999853210 1 1 2345566777887665432 23589
Q ss_pred ChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1235 SgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|+||+.||-|||||..+|++|+||||.|++.++-...+.+.|++..+ +.|+++|-||++.+++ ||||+||+.|+++.
T Consensus 151 syG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IA 230 (250)
T COG0411 151 SYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIA 230 (250)
T ss_pred ChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcc
Confidence 99999999999999999999999999999999999999999998774 4899999999999988 99999999999999
Q ss_pred ecChhHHhhcC
Q 000702 1312 FDTPGRLLEDK 1322 (1343)
Q Consensus 1312 ~g~p~eLl~~~ 1322 (1343)
.|+|+|..+++
T Consensus 231 eG~P~eV~~dp 241 (250)
T COG0411 231 EGTPEEVRNNP 241 (250)
T ss_pred cCCHHHHhcCH
Confidence 99999999875
No 373
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=338.62 Aligned_cols=199 Identities=33% Similarity=0.464 Sum_probs=165.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~ 519 (1343)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 478999999984 25799999999999999999999999999999999999999999999987 3799
Q ss_pred EcccccccC-ccHHHHhccCCCC-------CHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 520 VSQSAWIQS-GNIEENILFGSPM-------DKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~~-------~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
++|+|.++. .|++||+.++... +.. +.++.++.+++ .........+||||||||++|
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~l 147 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQL-----------DWLADRYPAQLSGGQRQRVAL 147 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHH
Confidence 999998875 6999999986421 111 12223333333 223445667899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|||++.+|+++||||||++||+++.+.+.+ ++.... .|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 148 ARALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 999999999999999999999999887765 444432 3789999999999875 499999999999999999988764
No 374
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.1e-35 Score=379.22 Aligned_cols=216 Identities=24% Similarity=0.324 Sum_probs=146.7
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHh------cccC----C-----------Ccce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALF------RLIE----P-----------ACGR 1154 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~------rl~~----~-----------~~G~ 1154 (1343)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999873 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEEcCeecCCCC----------hHHHhhcceeecCC------ccccCC--------------chhhhcCCC---------
Q 000702 1155 IIIDNIDISTIG----------LHDLRSRLGIIPQD------PNLFEG--------------TIRCNLDPL--------- 1195 (1343)
Q Consensus 1155 I~IdG~di~~i~----------l~~LR~~i~iVpQd------p~lF~g--------------TIr~NLdp~--------- 1195 (1343)
|.||-.+|..-+ .+.+|.-.+=.|+- +-.|+= .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 666666654322 13466666655542 233331 111111100
Q ss_pred ---CCCCHH------------H-----HHHHHHHc----CCchHHhcc-cCCCCc-ccccCCCCCChhHHHHHHHHHHHh
Q 000702 1196 ---EEHSDR------------E-----IWEALDKS----QLGDIVRGK-DQKLET-PVLENGDNWSVGQRQLVSLGRALL 1249 (1343)
Q Consensus 1196 ---~~~sd~------------e-----i~~aL~~~----~L~~~i~~l-p~gLdt-~v~e~G~nLSgGQrQrl~LARALL 1249 (1343)
..+.++ | +.++++.. .+.+....+ .-||+. .++.....|||||+||++|||+|+
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 1 11221111 000100000 124543 356666889999999999999999
Q ss_pred c---CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEE------eCCEEeeecChhHH
Q 000702 1250 K---QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVL------SDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1250 ~---~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl------~~G~ive~g~p~eL 1318 (1343)
+ +|+++||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998764 478999999999999899999999 79999999999986
No 375
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-36 Score=338.88 Aligned_cols=195 Identities=29% Similarity=0.440 Sum_probs=161.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCc-----cCCCcEEEECC-----------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEI-----PKISGEVRLCG----------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~-----~~~~G~i~~~g----------- 515 (1343)
++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 46899999884 357999999999999999999999999999999999999 99999999877
Q ss_pred ----eEEEEcccccccCccHHHHhccCCCC----C----HHHHHHHHHHhhhhhhHhhccCCCccccCCC--CCCCChHH
Q 000702 516 ----TAAYVSQSAWIQSGNIEENILFGSPM----D----KAKYKKVIHACSLKKDLELFSHGDQTIIGDR--GINLSGGQ 581 (1343)
Q Consensus 516 ----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~--g~~LSgGQ 581 (1343)
.++|++|++.+++.|++||+.++... . +++..++++.+++.+.+ ..+ +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEV-----------KDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHH-----------hccCCcccCCHHH
Confidence 27999999988889999999876321 1 12233344444443222 222 57899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+.+.+.+++. +....+.+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 225 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTE 225 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcc
Confidence 9999999999999999999999999999998887654 544433489999999999876 49999999999999998875
Q ss_pred H
Q 000702 661 D 661 (1343)
Q Consensus 661 ~ 661 (1343)
+
T Consensus 226 ~ 226 (227)
T cd03260 226 Q 226 (227)
T ss_pred c
Confidence 4
No 376
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.3e-36 Score=356.13 Aligned_cols=201 Identities=31% Similarity=0.385 Sum_probs=169.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~ 519 (1343)
.++++|++++|. +..+|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999984 35689999999999999999999999999999999999999999999988 3899
Q ss_pred EcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
|+|++.+|. .||+|||.|+.. .+. ++.+++++..+| .........+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L-----------~~~~~~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGL-----------PGSERKYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------CchhhCChhhCCHHHHHHHHHHHHH
Confidence 999999884 799999999743 222 223333333333 2334467789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+.+|+++|||||||+||+.+.+++.+.+..... .|.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998887665433222 3899999999999865 5999999999999999999998764
No 377
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3.3e-36 Score=334.70 Aligned_cols=203 Identities=28% Similarity=0.435 Sum_probs=174.4
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------e
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------T 516 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~ 516 (1343)
+.++++|++++|+.....++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 10 ~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 89 (226)
T cd03248 10 GIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHSK 89 (226)
T ss_pred ceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHhh
Confidence 469999999998643234799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEcccccccCccHHHHhccCCCC-CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCC
Q 000702 517 AAYVSQSAWIQSGNIEENILFGSPM-DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDA 595 (1343)
Q Consensus 517 i~~v~Q~~~l~~~ti~~Ni~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~ 595 (1343)
++|++|++.++..|++||+.++... ....+.+..+...+.+.++.++.|.++.+++++.+|||||||||+||||++.+|
T Consensus 90 i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~p 169 (226)
T cd03248 90 VSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNP 169 (226)
T ss_pred EEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 7999999999999999999987542 222233333444566778888888888899999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeE
Q 000702 596 DIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRI 653 (1343)
Q Consensus 596 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i 653 (1343)
+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+..||+|++|++|++
T Consensus 170 ~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 170 QVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999887765 45555567899999999999878999999999974
No 378
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=348.26 Aligned_cols=205 Identities=26% Similarity=0.406 Sum_probs=167.3
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
.|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999985321 13699999999999999999999999999999999999999999998853
Q ss_pred ------------------------eEEEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhc
Q 000702 516 ------------------------TAAYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELF 562 (1343)
Q Consensus 516 ------------------------~i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l 562 (1343)
.++||+|+| .++..||+|||.|+.. .+++ +..++++.++|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----- 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE----- 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh-----
Confidence 269999986 5788899999998742 2222 2333344444321
Q ss_pred cCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-c
Q 000702 563 SHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-A 641 (1343)
Q Consensus 563 ~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~ 641 (1343)
...+....+||||||||++|||||+.+|+++||||||++||+...+.+.+.+.....+|+|+|+|||+++.+. .
T Consensus 157 -----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 157 -----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred -----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHh
Confidence 1234667899999999999999999999999999999999999987776543322235899999999999765 5
Q ss_pred CCEEEEEeCCeEEEecChHHHHhc
Q 000702 642 ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 642 ~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||+|++|++|++++.|+.+++...
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999988653
No 379
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.1e-36 Score=355.88 Aligned_cols=200 Identities=27% Similarity=0.397 Sum_probs=168.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~~ 519 (1343)
.++++|++++|. +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 14 ~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 90 (375)
T PRK09452 14 LVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVNT 90 (375)
T ss_pred eEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999984 357999999999999999999999999999999999999999999999883 899
Q ss_pred Eccccccc-CccHHHHhccCCCC---CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQ-SGNIEENILFGSPM---DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~-~~ti~~Ni~~g~~~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
|+|++.+| ..||+|||.|+... +. ++.+++++.+++.+. ......+|||||||||+|||||
T Consensus 91 vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~p~~LSgGq~QRVaLARaL 159 (375)
T PRK09452 91 VFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEF-----------AQRKPHQLSGGQQQRVAIARAV 159 (375)
T ss_pred EecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 99999888 55999999998532 22 223344444444333 3345578999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+.+|+++|||||||+||+...+.+.+. ++.+. .|.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 160 ~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 160 VNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998877654 44433 3899999999998864 5999999999999999999998754
No 380
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=347.34 Aligned_cols=202 Identities=23% Similarity=0.454 Sum_probs=167.4
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999995322 24799999999999999999999999999999999999999999999987
Q ss_pred ----eEEEEcccc--cccCccHHHHhccCCC---CCHHHH----HHHHHHhhhhhhHhhccCCCcc-ccCCCCCCCChHH
Q 000702 516 ----TAAYVSQSA--WIQSGNIEENILFGSP---MDKAKY----KKVIHACSLKKDLELFSHGDQT-IIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ----~i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~~~----~~~~~~~~l~~~~~~l~~g~~t-~ig~~g~~LSgGQ 581 (1343)
.++||+|+| .++..|++|||.|+.. .+.++. .++++.+ |+.+ .....+.+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~~LSgGq 150 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDL-----------GFSRDVMSQSPFQMSGGQ 150 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc-----------CCChhhhhCCcccCCHHH
Confidence 269999997 5788899999998742 233222 2222222 3332 2346778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecC
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~ 658 (1343)
|||++|||||+.+|+++||||||++||+.+...+.+. ++.+. .|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999998887654 44432 4899999999999875 599999999999999999
Q ss_pred hHHHHh
Q 000702 659 YDDLLQ 664 (1343)
Q Consensus 659 ~~~l~~ 664 (1343)
++++.+
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988765
No 381
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=4e-36 Score=339.08 Aligned_cols=210 Identities=19% Similarity=0.232 Sum_probs=169.5
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhccc--CCCcceEEEcCeecCCCChHHHh-hc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLI--EPACGRIIIDNIDISTIGLHDLR-SR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~--~~~~G~I~IdG~di~~i~l~~LR-~~ 1173 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999974 35999999999999999999999999999999999994 69999999999999888776654 57
Q ss_pred ceeecCCccccCC-chhhh-------cCCCCC---CC----HHHHHHHHHHcCCchHHhcccCCC-CcccccCCCCCChh
Q 000702 1174 LGIIPQDPNLFEG-TIRCN-------LDPLEE---HS----DREIWEALDKSQLGDIVRGKDQKL-ETPVLENGDNWSVG 1237 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~N-------Ldp~~~---~s----d~ei~~aL~~~~L~~~i~~lp~gL-dt~v~e~G~nLSgG 1237 (1343)
++++||+|.++.. |..++ +..... .. .+.+.+.++..++ |.++ +..+ ..+||||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~---~~~LS~G 149 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV---NVGFSGG 149 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC---CCCCCHH
Confidence 9999999987754 43333 221111 01 1123334444444 2222 2222 1369999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc--cCEEEEEeCCEEeeecC
Q 000702 1238 QRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID--SDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1238 QrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~--~DrIlvl~~G~ive~g~ 1314 (1343)
||||++||||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+
T Consensus 150 ~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~ 229 (248)
T PRK09580 150 EKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGD 229 (248)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCC
Confidence 99999999999999999999999999999999999999987644 6899999999999887 89999999999999999
Q ss_pred hhHH
Q 000702 1315 PGRL 1318 (1343)
Q Consensus 1315 p~eL 1318 (1343)
+++.
T Consensus 230 ~~~~ 233 (248)
T PRK09580 230 FTLV 233 (248)
T ss_pred HHHH
Confidence 8854
No 382
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.8e-36 Score=328.61 Aligned_cols=194 Identities=24% Similarity=0.350 Sum_probs=168.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999975 35999999999999999999999999999999999999999999999999987643 467889999
Q ss_pred ecCCcccc-CCchhhhcCCCC-CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCE
Q 000702 1177 IPQDPNLF-EGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARI 1254 (1343)
Q Consensus 1177 VpQdp~lF-~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~I 1254 (1343)
+||++.++ ..|+++|+.... ...++++.++++..++.++.. +.+ .+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~----~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFED-------RPV----AQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhc-------Cch----hhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 579999996542 345677889999999875532 222 57999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccc-cccCEEEEE
Q 000702 1255 LVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTV-IDSDLVLVL 1304 (1343)
Q Consensus 1255 LlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~~DrIlvl 1304 (1343)
|||||||++||+++.+.+.+.|++.. +++|+|+|||+...+ ..||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998754 378999999987765 458999887
No 383
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.5e-35 Score=391.45 Aligned_cols=209 Identities=26% Similarity=0.282 Sum_probs=148.1
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHH---------HHhcccCCCc----c----eEEEc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQ---------ALFRLIEPAC----G----RIIID 1158 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~---------~L~rl~~~~~----G----~I~Id 1158 (1343)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888862 2799999999999999999999999999999 4445332211 1 24566
Q ss_pred CeecCCCCh----------HHHh---------hcce-----eecCC------------------c---------------
Q 000702 1159 NIDISTIGL----------HDLR---------SRLG-----IIPQD------------------P--------------- 1181 (1343)
Q Consensus 1159 G~di~~i~l----------~~LR---------~~i~-----iVpQd------------------p--------------- 1181 (1343)
-.+|..-+. +++| ++.+ +.+|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 555543211 1445 1122 22332 1
Q ss_pred -----cccCC-chhhhcCCCCC-C-----CHHHHH---HHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1182 -----NLFEG-TIRCNLDPLEE-H-----SDREIW---EALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1182 -----~lF~g-TIr~NLdp~~~-~-----sd~ei~---~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
+.+.+ ||.|||+.... + +.+++. ++|+.++|.+. ..+....+||||||||++|||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~vGL~~l----------~l~q~~~tLSGGE~QRV~LAr 822 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSLGLDYL----------PLGRPLSSLSGGEIQRLKLAY 822 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHcCCcch----------hhcCccccCCHHHHHHHHHHH
Confidence 12333 67777754311 0 112222 23444444221 134445689999999999999
Q ss_pred HHh---cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEEEe------CCEEeeecChh
Q 000702 1247 ALL---KQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLVLS------DGRVAEFDTPG 1316 (1343)
Q Consensus 1247 ALL---~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~------~G~ive~g~p~ 1316 (1343)
||+ ++|++|||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|+++..|+|+
T Consensus 823 aL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 823 ELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred HHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 998 5999999999999999999999999998764 4789999999999998899999996 79999999999
Q ss_pred HHhhc
Q 000702 1317 RLLED 1321 (1343)
Q Consensus 1317 eLl~~ 1321 (1343)
++...
T Consensus 903 el~~~ 907 (1809)
T PRK00635 903 ELIHL 907 (1809)
T ss_pred HHHhc
Confidence 99863
No 384
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.2e-36 Score=338.46 Aligned_cols=203 Identities=25% Similarity=0.346 Sum_probs=165.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TA 517 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i 517 (1343)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 36789999984 25699999999999999999999999999999999999999999999877 27
Q ss_pred EEEcccccccCc-cHHHHhccCCCCC-------------HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 518 AYVSQSAWIQSG-NIEENILFGSPMD-------------KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 518 ~~v~Q~~~l~~~-ti~~Ni~~g~~~~-------------~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
+|++|++.++.. |++||+.++.... .....+ ...+.++.+ |.....+....+|||||||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~q 150 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARE-----RAEELLERV--GLADLADRPAGELSYGQQR 150 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHH-----HHHHHHHHc--CccchhhCChhhCCHHHHH
Confidence 999999988775 9999998764211 111111 111222222 3344456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 662 (1343)
|++||||++.+|+++||||||++||+.+.+.+++.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 151 RLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 9999999999999999999999999999888776443322368999999999998865 999999999999999999887
Q ss_pred Hh
Q 000702 663 LQ 664 (1343)
Q Consensus 663 ~~ 664 (1343)
..
T Consensus 231 ~~ 232 (236)
T cd03219 231 RN 232 (236)
T ss_pred cc
Confidence 54
No 385
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.1e-36 Score=354.74 Aligned_cols=202 Identities=27% Similarity=0.423 Sum_probs=169.3
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCC--cEEEECC-----------e
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKIS--GEVRLCG-----------T 516 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~--G~i~~~g-----------~ 516 (1343)
+.++++|++++|. +.++|+|+||+|++||+++|+||||||||||+++|+|+.+|++ |+|.++| .
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 4689999999984 2579999999999999999999999999999999999999999 9999987 3
Q ss_pred EEEEcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
++||+|++.+|. .||+|||.|+.. .+. ++.+++++..+|.+ .......+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~-----------~~~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGD-----------AAAHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCc-----------hhhCChhhCCHHHHHHHHHH
Confidence 799999998885 599999998743 222 23334444444432 23456678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC--CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALA--NKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~--~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|||..+|+++|||||||+||+...+++.+.+.....+ |.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999988886654332333 789999999999865 5999999999999999999998764
No 386
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3e-36 Score=353.11 Aligned_cols=200 Identities=36% Similarity=0.487 Sum_probs=167.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~ 519 (1343)
.++++|++++|. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 478999999984 25799999999999999999999999999999999999999999999987 3899
Q ss_pred EcccccccC-ccHHHHhccCCCC-------CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 520 VSQSAWIQS-GNIEENILFGSPM-------DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~~-------~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
|+|++.++. .|++|||.|+... +. ++.+++++..++. .....+..+|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~-----------~~~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLA-----------HLADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHHHHH
Confidence 999998886 6999999997431 21 1223333333332 22345667899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
||||+.+|+++|||||||+||+.+.+.+.+. ++.+. + |+|+|+|||+++.+. .||+|++|++|++++.|+++++..
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999998887654 44433 3 789999999999865 499999999999999999999875
Q ss_pred c
Q 000702 665 A 665 (1343)
Q Consensus 665 ~ 665 (1343)
.
T Consensus 227 ~ 227 (353)
T PRK10851 227 E 227 (353)
T ss_pred C
Confidence 4
No 387
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=344.09 Aligned_cols=198 Identities=30% Similarity=0.462 Sum_probs=166.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|+++.|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999842 35699999999999999999999999999999999999999999999987 37
Q ss_pred EEEcccc--cccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSA--WIQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+| .++..|++||+.|+.. .+. +++.++++.+++.+.. ......||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFR-----------DKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCChhhCCHHHHHHHHHH
Confidence 9999998 5788999999998742 222 2344445555553322 334568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHH
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
|||+.+|+++||||||++||+.+...+.+. +..+ .+|+|+|++||+++.+. .||+|++|++|++++.|+.+++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999998887654 4443 35899999999999885 5999999999999999998654
No 388
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.6e-36 Score=337.51 Aligned_cols=190 Identities=25% Similarity=0.368 Sum_probs=163.6
Q ss_pred cccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeecCCccccC-Cchhhhc
Q 000702 1114 LHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFE-GTIRCNL 1192 (1343)
Q Consensus 1114 L~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVpQdp~lF~-gTIr~NL 1192 (1343)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCC
Q 000702 1193 DPL-----EEHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATAS 1263 (1343)
Q Consensus 1193 dp~-----~~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~ 1263 (1343)
... ...++ +.+.++++..++.+.... . ...||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADK-------R----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcC-------C----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 632 22232 236677888887654432 2 247999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1264 VDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1264 lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998764 37899999999998865 9999999999999999887663
No 389
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=325.26 Aligned_cols=220 Identities=27% Similarity=0.389 Sum_probs=192.9
Q ss_pred eEEEEEEEEEEcCCC----------------------CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcc
Q 000702 1096 TIELIDLKVRYGENL----------------------PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACG 1153 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~----------------------~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G 1153 (1343)
.|+++||+.-|+.+. ..-++|+||+|+.||+.-|.|-||||||||+++|.|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588899988886431 1247899999999999999999999999999999999999999
Q ss_pred eEEEcCeecCCCChHHHh----hcceeecCCccccCC-chhhhcCCCCC---CC----HHHHHHHHHHcCCchHHhcccC
Q 000702 1154 RIIIDNIDISTIGLHDLR----SRLGIIPQDPNLFEG-TIRCNLDPLEE---HS----DREIWEALDKSQLGDIVRGKDQ 1221 (1343)
Q Consensus 1154 ~I~IdG~di~~i~l~~LR----~~i~iVpQdp~lF~g-TIr~NLdp~~~---~s----d~ei~~aL~~~~L~~~i~~lp~ 1221 (1343)
+|++||.||..++..+|| ++++.|+|.--||.- ||-+|..+.-+ .+ .+...++|+.+||.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988764 579999999999965 99999976532 22 2346789999999999888775
Q ss_pred CCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCccccc-cc
Q 000702 1222 KLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVI-DS 1298 (1343)
Q Consensus 1222 gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~~ 1298 (1343)
.||||++||+.|||||..+|+||++|||.|+||+--...+|+-|.+.-+ ++|+++|||+|+... --
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 5899999999999999999999999999999999999999998876432 689999999998865 49
Q ss_pred CEEEEEeCCEEeeecChhHHhhcCCcHH
Q 000702 1299 DLVLVLSDGRVAEFDTPGRLLEDKSSMF 1326 (1343)
Q Consensus 1299 DrIlvl~~G~ive~g~p~eLl~~~~~~f 1326 (1343)
|||..|++|+|+..|||+|++.++...|
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndY 260 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDY 260 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHH
Confidence 9999999999999999999999886544
No 390
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.7e-36 Score=326.63 Aligned_cols=189 Identities=26% Similarity=0.434 Sum_probs=162.7
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------e
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------T 516 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~ 516 (1343)
..++++|++++|.. ..+++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~-~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAP-DLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCC-CCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 36899999999853 234799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 517 AAYVSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 517 i~~v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
++|++|+|.++++|++||+.+...+++++ +.+++. ++++...|||||+||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~---~~~~l~---------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEE---IYGALR---------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHH---HHHHhh---------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 89999999999999999998765444332 222221 346788999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 658 (1343)
++||||||++||+.+.+.+.+ .++...+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999877765 4555556899999999999887799999999999998775
No 391
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=332.75 Aligned_cols=191 Identities=36% Similarity=0.490 Sum_probs=157.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAYV 520 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~v 520 (1343)
++++|+++.|. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 46789999984 25799999999999999999999999999999999999999999999987 37999
Q ss_pred cccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 521 SQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 521 ~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|++.++. .|++||+.++.. .+.. +.+++++.+++. ........+||||||||++||||+.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLE-----------GLLNRYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hhhhcChhhCCHHHHHHHHHHHHHh
Confidence 99988774 799999987632 1221 233334444333 2334556789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
.+|+++||||||++||+.+.+.+++. +..+ . .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999998877654 4443 2 38999999999998765 9999999999998765
No 392
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-36 Score=355.81 Aligned_cols=200 Identities=30% Similarity=0.412 Sum_probs=168.0
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAY 519 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~ 519 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 488999999984 35799999999999999999999999999999999999999999999987 3899
Q ss_pred EcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
++|++.++. .||+|||.|+.. .+. ++.+++++.+++.+ .......+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-----------~~~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-----------LLDRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 999998885 699999998743 222 23344444444432 23455678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+.+|+++|||||||+||+.+.+.+.+. ++.+ . .|+|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998887664 4443 2 3899999999998875 5999999999999999999998653
No 393
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-36 Score=334.76 Aligned_cols=201 Identities=27% Similarity=0.448 Sum_probs=168.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 488999999874 35799999999999999999999999999999999999999999999987 27
Q ss_pred EEEcccccccCccHHHHhccCCCC---CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 518 AYVSQSAWIQSGNIEENILFGSPM---DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
+|++|++.++..|++||+.++... ..++..++++.+++..+ .......+||||||||++||||++.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKE----------YATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHH----------HhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999986432 12334445555544321 12356778999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|+++||||||++||+.+.+.+.+ ++.... .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 99999999999999998777765 444432 38999999999998765 999999999999999999988653
No 394
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-36 Score=338.11 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=170.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc---CCCcEEEECC------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP---KISGEVRLCG------------ 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~---~~~G~i~~~g------------ 515 (1343)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999984 3579999999999999999999999999999999999984 6899999987
Q ss_pred -eEEEEcccccccCccHHHHhccCCCC---------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 -TAAYVSQSAWIQSGNIEENILFGSPM---------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~~ti~~Ni~~g~~~---------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++|++|++.+++.|++||+.++... .+++..++++.+++...+.. ...+++.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 37999999999999999999876321 11233455555555433321 24567789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
+||||++++|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999777755 5555556899999999999876 599999999999999999988764
No 395
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5e-36 Score=337.20 Aligned_cols=197 Identities=31% Similarity=0.443 Sum_probs=163.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--------------- 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--------------- 516 (1343)
++++|++++|. .++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~--~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYP--NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecC--CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 67899999884 1357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcccccccC-ccHHHHhccCCCC------------CH---HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCCh
Q 000702 517 -AAYVSQSAWIQS-GNIEENILFGSPM------------DK---AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSG 579 (1343)
Q Consensus 517 -i~~v~Q~~~l~~-~ti~~Ni~~g~~~------------~~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSg 579 (1343)
++|++|++.++. .|++||+.++... .+ ++..++++.+++ .......+.+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGL-----------ADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCH
Confidence 799999998775 6999999876321 11 122233333333 2234456789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEe
Q 000702 580 GQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQA 656 (1343)
Q Consensus 580 GQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~ 656 (1343)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +... . .|+|+|++||+++.+. .||++++|++|++++.
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 999999999999999999999999999999998777654 4443 2 3799999999999885 5999999999999999
Q ss_pred cChHHH
Q 000702 657 GKYDDL 662 (1343)
Q Consensus 657 g~~~~l 662 (1343)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998876
No 396
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.8e-36 Score=330.05 Aligned_cols=187 Identities=30% Similarity=0.477 Sum_probs=157.1
Q ss_pred EEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------eEEEEccc
Q 000702 454 IENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG----------TAAYVSQS 523 (1343)
Q Consensus 454 ~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g----------~i~~v~Q~ 523 (1343)
++|++++|.. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|++|+
T Consensus 2 ~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 2 IENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred cccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 5788998742 15799999999999999999999999999999999999999999999987 37999999
Q ss_pred c--cccCccHHHHhccCCCC---CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEE
Q 000702 524 A--WIQSGNIEENILFGSPM---DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIY 598 (1343)
Q Consensus 524 ~--~l~~~ti~~Ni~~g~~~---~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~il 598 (1343)
| .++..|++||+.++.+. ++++..++++.+++.+.. .....+||||||||++||||++.+|+++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~laral~~~p~ll 148 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALK-----------ERHPLSLSGGQKQRLAIAAALLSGKDLL 148 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhc-----------CCCchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 7 46788999999886432 234555666666654332 3445689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEE
Q 000702 599 LLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRII 654 (1343)
Q Consensus 599 lLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~ 654 (1343)
||||||++||+.+.+.+.+ .+... .+|+|+|++||+++.+.. ||++++|++|+++
T Consensus 149 llDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 149 IFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999887765 45443 468999999999998864 9999999999974
No 397
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-36 Score=373.46 Aligned_cols=212 Identities=28% Similarity=0.400 Sum_probs=182.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CcceEEEcCeecCCCChHH-Hhh
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP--ACGRIIIDNIDISTIGLHD-LRS 1172 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~--~~G~I~IdG~di~~i~l~~-LR~ 1172 (1343)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4999999999964 3699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred cceeecCCccccCC-chhhhcCCCCC------CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1173 RLGIIPQDPNLFEG-TIRCNLDPLEE------HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1173 ~i~iVpQdp~lF~g-TIr~NLdp~~~------~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
+++||||+|.+|.. |+++|+..... .+ .+++.++++..++.+.. +..+ .+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-------ATPV----GNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-------ccch----hhCCHHHHHH
Confidence 89999999998875 99999974311 12 13467778887774332 3333 4799999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
++|||||+.+|+||||||||++||+++...+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998763 46899999999999876 9999999999999999998875
Q ss_pred h
Q 000702 1320 E 1320 (1343)
Q Consensus 1320 ~ 1320 (1343)
.
T Consensus 232 ~ 232 (506)
T PRK13549 232 E 232 (506)
T ss_pred H
Confidence 3
No 398
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.5e-36 Score=371.20 Aligned_cols=212 Identities=24% Similarity=0.371 Sum_probs=185.3
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHh-hcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLR-SRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR-~~i 1174 (1343)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999974 3599999999999999999999999999999999999999999999999999887776654 469
Q ss_pred eeecCCccccCC-chhhhcCCCCC---CCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLEE---HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~~---~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
+|+||++.+|.+ |+++|+..... ..++++.++++..++.+.. +..+ .+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-------DSSA----GSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-------cCCh----hhCCHHHHHHHHHHHHHHc
Confidence 999999998876 99999974321 1234577788888875432 3333 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
+|++|||||||++||+.+...+.+.|++.. +++|||+|||+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998763 37899999999999865 99999999999999999998864
No 399
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=333.60 Aligned_cols=196 Identities=34% Similarity=0.481 Sum_probs=160.5
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------eEEEEcc
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------TAAYVSQ 522 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------~i~~v~Q 522 (1343)
++++|+++.|.... .+++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46889999885311 15799999999999999999999999999999999999999999999987 4899999
Q ss_pred cccccC-ccHHHHhccCCC---CC----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 523 SAWIQS-GNIEENILFGSP---MD----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 523 ~~~l~~-~ti~~Ni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++.++. .|++||+.++.. .+ .++.++.++.+++.+ .......+||||||||++||||++.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSG-----------FENAYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 998876 799999987532 11 123334444444432 23345578999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEe--CCeEEEecCh
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLK--EGRIIQAGKY 659 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~--~G~i~~~g~~ 659 (1343)
|+++||||||++||+.+.+.+++. +... . .++|+|++||+++.+. .||++++|+ +|+++++++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999998888764 4443 2 4899999999999875 599999999 7999988764
No 400
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=333.34 Aligned_cols=197 Identities=22% Similarity=0.346 Sum_probs=162.0
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TAAY 519 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i~~ 519 (1343)
++++|++++|. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 46899999884 35799999999999999999999999999999999999999999999987 3799
Q ss_pred EcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
++|++.++. .|++||+.++.. .+. ++.+++++.+++.+. ......+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEA-----------ADRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 999998765 599999987421 111 233444454444322 2344568999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTALA-NKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 662 (1343)
+.+|+++||||||++||+++.+.+.+.+.....+ |+|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999988776543332333 7899999999998865 999999999999999887664
No 401
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.1e-36 Score=337.82 Aligned_cols=191 Identities=25% Similarity=0.390 Sum_probs=160.5
Q ss_pred CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcceeec-CCcccc-CCch
Q 000702 1111 PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIP-QDPNLF-EGTI 1188 (1343)
Q Consensus 1111 ~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iVp-Qdp~lF-~gTI 1188 (1343)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 345788999997 667776 4699
Q ss_pred hhhcCCC---CCCCHH----HHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCC
Q 000702 1189 RCNLDPL---EEHSDR----EIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEAT 1261 (1343)
Q Consensus 1189 r~NLdp~---~~~sd~----ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaT 1261 (1343)
++|+... ...+.+ .+.++++..++.+.. |+.+ ..||+|||||++||||++.+|++|||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998532 122222 345566666665433 3333 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEeCCEEeeec
Q 000702 1262 ASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFD 1313 (1343)
Q Consensus 1262 s~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g 1313 (1343)
++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999997643 6899999999998865 9999999999998765
No 402
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-36 Score=325.48 Aligned_cols=195 Identities=25% Similarity=0.415 Sum_probs=171.5
Q ss_pred eEEEEEEEEEEcCCC-------CcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH
Q 000702 1096 TIELIDLKVRYGENL-------PLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~-------~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~ 1168 (1343)
-++++|++..|+... -.+++||||+|++||.+||||.|||||||+.++|+|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 488999999996432 25899999999999999999999999999999999999999999999999987766
Q ss_pred HHhhcceeecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCch-HHhcccCCCCcccccCCCCCChhHHHHHHHHHH
Q 000702 1169 DLRSRLGIIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGD-IVRGKDQKLETPVLENGDNWSVGQRQLVSLGRA 1247 (1343)
Q Consensus 1169 ~LR~~i~iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARA 1247 (1343)
.+..++++.+.|+.+|+.+ +..+.| ..||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryP-----------helSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYP-----------HELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCC-----------cccCchhhhhHHHHHH
Confidence 2233567999999999876 444444 4689999999999999
Q ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcCCc
Q 000702 1248 LLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDKSS 1324 (1343)
Q Consensus 1248 LL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~~~ 1324 (1343)
|.-+|+++|+|||||+||....++|...+.+.- .+-|.++|||+++.+.. ||||.||..|+|+|.|+-+++++++.-
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999887643 37899999999999987 999999999999999999999998876
Q ss_pred HHHHHH
Q 000702 1325 MFLKLV 1330 (1343)
Q Consensus 1325 ~f~~l~ 1330 (1343)
-|-+..
T Consensus 204 pYTk~L 209 (268)
T COG4608 204 PYTKAL 209 (268)
T ss_pred HHHHHH
Confidence 665444
No 403
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-36 Score=338.74 Aligned_cols=204 Identities=25% Similarity=0.427 Sum_probs=168.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g---------- 515 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 6 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 589999999984 2579999999999999999999999999999999999874 5899999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCC---C-C----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSP---M-D----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~---~-~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++.+.+ .+..+....+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHHH
Confidence 2799999999988999999987631 1 1 12333344444443222 1234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQ 234 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999877765 4555555789999999999885 499999999999999999998
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+...
T Consensus 235 ~~~~ 238 (253)
T PRK14242 235 IFTR 238 (253)
T ss_pred HHcC
Confidence 8643
No 404
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.5e-36 Score=333.28 Aligned_cols=189 Identities=24% Similarity=0.427 Sum_probs=156.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--------------- 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--------------- 516 (1343)
++++|++++|+. ..+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~-~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPG-GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecC-CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 688999999853 2246999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcccccccC-ccHHHHhccCCC---CC----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 -AAYVSQSAWIQS-GNIEENILFGSP---MD----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 -i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
++|++|++.++. .|++||+.++.. .+ +++..++++.+++.+. ......+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGK-----------AHALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHH
Confidence 799999998775 699999987521 11 2233444444444322 234556899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRI 653 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i 653 (1343)
|||++.+|+++||||||++||+.+.+.+.+. +... .+|+|+|+|||+++.+.. ||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999998887764 4443 358999999999998865 999999999974
No 405
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.7e-36 Score=315.06 Aligned_cols=159 Identities=36% Similarity=0.574 Sum_probs=147.8
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH-HHhhcce
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH-DLRSRLG 1175 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~-~LR~~i~ 1175 (1343)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999743 699999999999999999999999999999999999999999999999999888764 4677899
Q ss_pred eecCCccccCCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCCEE
Q 000702 1176 IIPQDPNLFEGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARIL 1255 (1343)
Q Consensus 1176 iVpQdp~lF~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~IL 1255 (1343)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 8999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1256 VLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1256 lLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. |||+++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998764 47899999999998765 99999999999975
No 406
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-36 Score=336.81 Aligned_cols=198 Identities=31% Similarity=0.430 Sum_probs=162.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------- 515 (1343)
++++|++++|.. ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 368899998842 25799999999999999999999999999999999999999999999876
Q ss_pred eEEEEcccccccC-ccHHHHhccCCC------------CCHH---HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCCh
Q 000702 516 TAAYVSQSAWIQS-GNIEENILFGSP------------MDKA---KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSG 579 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~-~ti~~Ni~~g~~------------~~~~---~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSg 579 (1343)
.++|++|++.++. .|++||+.++.. ..++ +..++++.++ ........+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVG-----------LLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcC-----------ChhhhCCCcccCCH
Confidence 2799999988765 799999987532 0111 1222222222 22334567789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEe
Q 000702 580 GQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQA 656 (1343)
Q Consensus 580 GQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~ 656 (1343)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +..+ . .|+|+|++||+++.+. .||++++|++|++++.
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~ 226 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFD 226 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEee
Confidence 999999999999999999999999999999998887664 4443 2 3899999999999987 5999999999999999
Q ss_pred cChHHHH
Q 000702 657 GKYDDLL 663 (1343)
Q Consensus 657 g~~~~l~ 663 (1343)
|+++++.
T Consensus 227 ~~~~~~~ 233 (241)
T cd03256 227 GPPAELT 233 (241)
T ss_pred cCHHHhh
Confidence 9988863
No 407
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=352.51 Aligned_cols=202 Identities=25% Similarity=0.391 Sum_probs=167.5
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
++++|++++|+... ++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999985212 35799999999999999999999999999999999999999999999986
Q ss_pred -eEEEEcccccccC-ccHHHHhccCCC---CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 -TAAYVSQSAWIQS-GNIEENILFGSP---MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++|++|++.++. .|++||+.++.. .+... ..+.++..++ .........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGL-----------SDKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHHHH
Confidence 3899999998875 799999988632 22222 2223333332 22344567789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|||||+.+|+++||||||++||+.+.+.+.+. +..+ . .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999998887754 4443 2 38999999999998765 9999999999999999999987
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 230 ~~ 231 (343)
T PRK11153 230 SH 231 (343)
T ss_pred hC
Confidence 54
No 408
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-36 Score=337.01 Aligned_cols=204 Identities=26% Similarity=0.367 Sum_probs=168.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g---------- 515 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 689999999984 25799999999999999999999999999999999999987 489999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.+++.|++|||.|+... +. ++..++++.+++...+ ++ ....++.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~----~~~~~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KD----KLNTNALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HH----HHhCCcccCCHHHH
Confidence 27999999999999999999986421 21 1223334444432211 11 23456789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999887765 45555567999999999998754 99999999999999999999
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+...
T Consensus 236 ~~~~ 239 (254)
T PRK14273 236 LFFN 239 (254)
T ss_pred HHhC
Confidence 8653
No 409
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.4e-36 Score=345.34 Aligned_cols=201 Identities=28% Similarity=0.440 Sum_probs=166.5
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eE
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TA 517 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i 517 (1343)
..++++|++++|. +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 3699999999984 35799999999999999999999999999999999999999999999987 38
Q ss_pred EEEccccccc-CccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 518 AYVSQSAWIQ-SGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 518 ~~v~Q~~~l~-~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
|||||++.++ +.|++||+.|... .+.. +.+++++.+++.. .......+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-----------KADAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------HhcCchhhCCHHHHHHHHHHH
Confidence 9999998876 4799999985321 1222 2223333333321 123345689999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000702 590 ALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 590 al~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||..+|++++|||||++||+.+.+.+++. +..+ .+|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999998887664 4444 358999999999999865 999999999999999999998643
No 410
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-36 Score=373.83 Aligned_cols=212 Identities=22% Similarity=0.318 Sum_probs=183.0
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHH-hhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDL-RSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~L-R~~i 1174 (1343)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988776553 4679
Q ss_pred eeecCCccccCC-chhhhcCCCC-------CC---C----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE-------EH---S----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~-------~~---s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1239 (1343)
+||||++.+|.+ |+++|+.... .. + .+++.++++.+++.+. ++.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-------LDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-------cccch----hhCCHHHH
Confidence 999999998875 9999996421 10 1 2346677888777543 23333 47999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhH
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGR 1317 (1343)
Q Consensus 1240 Qrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~e 1317 (1343)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+.+ ||||++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998754 36899999999999875 99999999999999999998
Q ss_pred Hhh
Q 000702 1318 LLE 1320 (1343)
Q Consensus 1318 Ll~ 1320 (1343)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 764
No 411
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=340.18 Aligned_cols=202 Identities=26% Similarity=0.435 Sum_probs=169.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------A 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i 517 (1343)
.++++|+++.|.. ..+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999853 2357999999999999999999999999999999999999999999999882 7
Q ss_pred EEEcccc--cccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSA--WIQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+| .+++.||+|||.++.. .++ ++..++++.++|...+ .....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFL-----------NREPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 4678899999998632 222 2334445555554333 344568999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||++.+|+++||||||++||+.+.+.+++. +..+. + |+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999998888764 44433 3 8999999999998878999999999999999999887653
No 412
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.3e-36 Score=336.86 Aligned_cols=202 Identities=26% Similarity=0.411 Sum_probs=167.2
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCC-----CcEEEECC-----------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKI-----SGEVRLCG----------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~-----~G~i~~~g----------- 515 (1343)
++++|++++|. +.++++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 68999999984 246999999999999999999999999999999999999998 99999876
Q ss_pred ----eEEEEcccccccCccHHHHhccCCC----CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 516 ----TAAYVSQSAWIQSGNIEENILFGSP----MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 ----~i~~v~Q~~~l~~~ti~~Ni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
.++|++|+++++..|++||+.++.. .+. ++.+++++..++..+++ ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 2799999999988999999987532 111 12233334444432111 2345667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHH
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
|++||||++.+|+++||||||++||+.+...+++ +++...+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999887765 4555545689999999999876 4999999999999999999887
Q ss_pred Hh
Q 000702 663 LQ 664 (1343)
Q Consensus 663 ~~ 664 (1343)
..
T Consensus 231 ~~ 232 (247)
T TIGR00972 231 FT 232 (247)
T ss_pred Hh
Confidence 64
No 413
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.3e-36 Score=371.20 Aligned_cols=212 Identities=23% Similarity=0.333 Sum_probs=181.6
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHH-Hhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHD-LRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~-LR~~i 1174 (1343)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 36999999999999999999999999999999999999999999999999997665544 46789
Q ss_pred eeecCCccccCC-chhhhcCCCC-------CCCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE-------EHSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLV 1242 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~-------~~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl 1242 (1343)
+|+||+|.+|.. |+++|+.... ..+. +++.++++..++.+.. |.++ .+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-------DKLV----GELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-------cCch----hhCCHHHHHHH
Confidence 999999988875 9999997421 1121 3466777887775432 3333 47999999999
Q ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhh
Q 000702 1243 SLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLE 1320 (1343)
Q Consensus 1243 ~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~ 1320 (1343)
+|||||+.+|++|||||||++||+++...+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998753 36899999999999865 99999999999999999988753
No 414
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-36 Score=333.19 Aligned_cols=196 Identities=26% Similarity=0.361 Sum_probs=161.7
Q ss_pred eEEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------
Q 000702 451 AIQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------- 515 (1343)
.++++|+++.|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999985322 24799999999999999999999999999999999999999999999986
Q ss_pred ---eEEEEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 ---TAAYVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 ---~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++|++|++.++. .|++||+.++.. .+.. +..++++.+++ .........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGL-----------EHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHH
Confidence 2799999998876 499999987421 2221 22333333333 233455678899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccccCCEEEEEeCCeEEEecC
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~ 658 (1343)
++||||++.+|+++||||||++||+.+.+.+.+. +... . +|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 9999999999999999999999999998877654 4443 2 4899999999999988889999999999998775
No 415
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.8e-36 Score=327.00 Aligned_cols=194 Identities=23% Similarity=0.345 Sum_probs=168.2
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999974 36999999999999999999999999999999999999999999999999997654 456788999
Q ss_pred ecCCccccC-CchhhhcCCCC----CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcC
Q 000702 1177 IPQDPNLFE-GTIRCNLDPLE----EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQ 1251 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~~----~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~ 1251 (1343)
+||++.++. .|+++|+.... ...++++.++++..++.++... . ...||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDV-------P----VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhC-------C----hhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996431 1345678889999999765432 2 257999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEE
Q 000702 1252 ARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVL 1304 (1343)
Q Consensus 1252 ~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl 1304 (1343)
|++|+|||||++||+++...+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998763 46899999999999965 4577766
No 416
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.2e-36 Score=327.64 Aligned_cols=191 Identities=25% Similarity=0.368 Sum_probs=161.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAYV 520 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~v 520 (1343)
++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|..+|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999884 35799999999999999999999999999999999999999999999987 37999
Q ss_pred ccccccc-CccHHHHhccCCC---CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 521 SQSAWIQ-SGNIEENILFGSP---MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 521 ~Q~~~l~-~~ti~~Ni~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
+|++.++ +.|++||+.++.. .++++.+++++..++.+. .......||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDS-----------AKKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHH-----------HhhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9998876 6899999987532 234455555665555433 234567899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
++||||||++||+.+.+.+.+. +... .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999998887654 4443 358999999999998865 9999999999998765
No 417
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=339.38 Aligned_cols=199 Identities=27% Similarity=0.460 Sum_probs=166.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TA 517 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i 517 (1343)
++++|++++|.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 678999999842 35699999999999999999999999999999999999999999999886 27
Q ss_pred EEEccccc--ccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSAW--IQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+|. +++.|++|||.++.. .+.. +.+++++.+++. ......+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-----------KYRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-----------HHhcCCcccCCHHHHHHHHHH
Confidence 99999986 567899999988642 2222 233333333332 233456678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
||++.+|+++||||||++||+.+...+++. ++.+ .+|+|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999998887765 4433 35899999999999987899999999999999999988754
No 418
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.8e-36 Score=331.59 Aligned_cols=190 Identities=33% Similarity=0.470 Sum_probs=155.5
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46889999985311 15799999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcccccccCc-cHHHHhccCCCC---CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 --TAAYVSQSAWIQSG-NIEENILFGSPM---DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 --~i~~v~Q~~~l~~~-ti~~Ni~~g~~~---~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++|++|++.++.. |++||+.++..+ +. ++..++++.+++ .........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGL-----------GDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhcChhhcCHHHHHHH
Confidence 37999999988865 999999886432 11 223333333333 2334456678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeE
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRI 653 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i 653 (1343)
+||||++.+|+++||||||++||+.+.+.+.+. +.... +|+|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999998777654 54443 38999999999998878999999999974
No 419
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=8e-36 Score=330.88 Aligned_cols=198 Identities=30% Similarity=0.465 Sum_probs=162.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TA 517 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i 517 (1343)
++++|++++|. ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 46889999874 35799999999999999999999999999999999999999999999887 27
Q ss_pred EEEcccccccCc-cHHHHhccCCCCC--HH---HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 518 AYVSQSAWIQSG-NIEENILFGSPMD--KA---KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 518 ~~v~Q~~~l~~~-ti~~Ni~~g~~~~--~~---~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
+|++|++.++.. |++||+.++.... .+ +..++++.+ . +.......+..+||||||||++||||+
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~------~----~l~~~~~~~~~~LS~G~~qrv~laral 147 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELF------P----RLKERRKQLAGTLSGGEQQMLAIARAL 147 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHH------H----hhhhhhhCchhhCCHHHHHHHHHHHHH
Confidence 999999988775 9999998864321 11 112222221 1 112234466788999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
..+|+++||||||++||+.+.+.+.+. ++.. .+++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 148 MSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred hcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999998877654 4443 358999999999998755 9999999999999999988764
No 420
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.4e-34 Score=386.06 Aligned_cols=216 Identities=23% Similarity=0.298 Sum_probs=190.6
Q ss_pred ceEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcc
Q 000702 1095 GTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRL 1174 (1343)
Q Consensus 1095 g~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i 1174 (1343)
..|+++|++++|+++..++|+|+||++++||++||+|+||||||||+++|.|++.|++|+|.++|.|+.. .....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996434569999999999999999999999999999999999999999999999999975 566789999
Q ss_pred eeecCCccccCC-chhhhcCCCC---CCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE---EHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~---~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
|++||++.+|+. |++|||..+. ..+ ++++.+.|+.++|.+...+ .+ .+||||||||++|||
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~-------~~----~~LSGGqKQRLsLAr 1074 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNE-------EA----QDLSGGMQRKLSVAI 1074 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-------Ch----hhCCHHHHHHHHHHH
Confidence 999999999975 9999996421 122 2457788888888655332 22 579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhcC
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLEDK 1322 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~~ 1322 (1343)
||+.+|+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++-
T Consensus 1075 ALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1075 AFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999999999998778999999999999865 9999999999999999999997653
No 421
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.2e-36 Score=330.70 Aligned_cols=198 Identities=25% Similarity=0.428 Sum_probs=164.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe------------EEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------AAY 519 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------i~~ 519 (1343)
++++|+++.|.. ..+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~-~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKK-GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCC-CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 468899998843 1257999999999999999999999999999999999999999999999873 799
Q ss_pred Eccccccc-CccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQ-SGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~-~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
++|++.++ ..|++||+.++.. .+. ++.+++++.+++.+ .......+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTD-----------KANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HHhChhhhCCHHHHHHHHHHHHH
Confidence 99999887 6899999987421 122 23344444444432 22345578999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 662 (1343)
+.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999887765 45555557999999999998865 999999999999999988764
No 422
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=341.49 Aligned_cols=203 Identities=28% Similarity=0.472 Sum_probs=166.6
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------ 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------ 516 (1343)
.++++|+++.|.+.. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999985321 257999999999999999999999999999999999999999999999772
Q ss_pred -----EEEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 517 -----AAYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 517 -----i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
++|++|+| .++..|++|||.|+.. .+.+ +.+++++.+++.. ........+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSE----------DLISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhhCCcccCCHHHH
Confidence 69999998 5778899999987532 2222 2233333333321 123456778999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ ++..+ .+|+|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999777765 45444 35899999999999876 59999999999999999998
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 8764
No 423
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-35 Score=332.09 Aligned_cols=203 Identities=26% Similarity=0.423 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TAAY 519 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i~~ 519 (1343)
++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 67899999984 35799999999999999999999999999999999999999999999987 2799
Q ss_pred Ecccccc-cCccHHHHhccCCC---CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCC
Q 000702 520 VSQSAWI-QSGNIEENILFGSP---MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDA 595 (1343)
Q Consensus 520 v~Q~~~l-~~~ti~~Ni~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~ 595 (1343)
++|++.+ +..|++||+.++.. .......+.+ .+.++.+ |.....+.+..+||||||||++||||++.+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERI-----AALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999877 67899999987532 2222111111 1112222 3334456777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 596 DIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 596 ~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
+++||||||++||+.+.+.+.+. +..+. +|+|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999998887754 44443 48999999999998878999999999999999999887653
No 424
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-36 Score=379.15 Aligned_cols=223 Identities=24% Similarity=0.339 Sum_probs=182.6
Q ss_pred eEEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecC----------
Q 000702 1096 TIELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDIS---------- 1163 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~---------- 1163 (1343)
-|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---HHh-hcceeecCCc--cccC-CchhhhcCCC----CCCC----HHHHHHHHHHcCCchHHhcccCCCCcccc
Q 000702 1164 TIGLH---DLR-SRLGIIPQDP--NLFE-GTIRCNLDPL----EEHS----DREIWEALDKSQLGDIVRGKDQKLETPVL 1228 (1343)
Q Consensus 1164 ~i~l~---~LR-~~i~iVpQdp--~lF~-gTIr~NLdp~----~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~ 1228 (1343)
+.+.. .+| ++|++|+|+| .++. -|+++|+... ...+ .+++.++|+.+++.+.- .-++..+
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~~~~- 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILSRYP- 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHhCCC-
Confidence 22322 334 4799999999 5776 4999999631 1122 24577788888885310 0122222
Q ss_pred cCCCCCChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCcccccc-cCEEEEEe
Q 000702 1229 ENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFK--DCTVCTIAHRIPTVID-SDLVLVLS 1305 (1343)
Q Consensus 1229 e~G~nLSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~ 1305 (1343)
.+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|+
T Consensus 167 ---~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 167 ---HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 57999999999999999999999999999999999999999999998652 7899999999999866 99999999
Q ss_pred CCEEeeecChhHHhhcCCcHH
Q 000702 1306 DGRVAEFDTPGRLLEDKSSMF 1326 (1343)
Q Consensus 1306 ~G~ive~g~p~eLl~~~~~~f 1326 (1343)
+|+|++.|++++++..+...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999986544333
No 425
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=334.00 Aligned_cols=195 Identities=30% Similarity=0.365 Sum_probs=163.7
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------eEEEEcc
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------TAAYVSQ 522 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------~i~~v~Q 522 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 12 ~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q 88 (257)
T PRK11247 12 PLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQ 88 (257)
T ss_pred cEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEec
Confidence 599999999984 35799999999999999999999999999999999999999999999987 3899999
Q ss_pred cccccC-ccHHHHhccCCCC-CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 000702 523 SAWIQS-GNIEENILFGSPM-DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLL 600 (1343)
Q Consensus 523 ~~~l~~-~ti~~Ni~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illL 600 (1343)
++.++. .|++||+.++... .+++..++++..++.+ .......+||||||||++||||++.+|+++||
T Consensus 89 ~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~~p~lllL 157 (257)
T PRK11247 89 DARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIHRPGLLLL 157 (257)
T ss_pred CccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 998776 7999999886421 1233444454444432 23456789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 601 DDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 601 Dep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
||||++||+.+.+.+.+. +..+ . .++|+|++||+++.+. .||+|++|++|+++++|+.+
T Consensus 158 DEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 158 DEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred eCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999998877654 4443 2 4799999999999875 59999999999999887653
No 426
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=7.7e-36 Score=328.67 Aligned_cols=189 Identities=33% Similarity=0.514 Sum_probs=154.5
Q ss_pred EEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------EEEEccccc
Q 000702 454 IENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--------AAYVSQSAW 525 (1343)
Q Consensus 454 ~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--------i~~v~Q~~~ 525 (1343)
++|++++|. ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 578899884 256999999999999999999999999999999999999999999999883 899999987
Q ss_pred c---cCccHHHHhccCCCC--------C---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 526 I---QSGNIEENILFGSPM--------D---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 526 l---~~~ti~~Ni~~g~~~--------~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
+ ++.|++||+.++... . +++.+++++.+++.+. ......+||||||||++||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al 147 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSEL-----------ADRQIGELSGGQQQRVLLARAL 147 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHH-----------HhCCcccCCHHHHHHHHHHHHH
Confidence 6 568999999876431 1 1233444454444332 2345678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
..+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++| +++.|
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 148 VQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999888766433322368999999999998865 9999999886 55543
No 427
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=340.13 Aligned_cols=200 Identities=25% Similarity=0.459 Sum_probs=168.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|++++|.. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999842 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcccc--cccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 517 -AAYVSQSA--WIQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 517 -i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
++|++|+| .+++.|++||+.++.. +.. ++.+++++.+++.. .....+.+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 69999998 5788999999987532 222 22334444444432 234667899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
|||||+.+|+++||||||++||+.+.+.+.+. +..+. + |+|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999998877654 44433 3 899999999999986 59999999999999999999886
Q ss_pred h
Q 000702 664 Q 664 (1343)
Q Consensus 664 ~ 664 (1343)
.
T Consensus 231 ~ 231 (283)
T PRK13636 231 A 231 (283)
T ss_pred c
Confidence 5
No 428
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=331.86 Aligned_cols=201 Identities=26% Similarity=0.422 Sum_probs=164.3
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
++++|++++|.... .+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 67899999985311 12799999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 516 -TAAYVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
.++|++|++.++. .|++||+.++.. .+.. +..+.++..++ .........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGL-----------EDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhhhhcChhhCCHHHHHHHH
Confidence 2799999999886 699999987532 2221 22223333333 23344566789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
||||++.+|+++||||||++||+.+.+.+.+. +..+ . .|+|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999998877654 4443 3 38999999999998765 9999999999999999988875
Q ss_pred h
Q 000702 664 Q 664 (1343)
Q Consensus 664 ~ 664 (1343)
+
T Consensus 230 ~ 230 (233)
T cd03258 230 A 230 (233)
T ss_pred c
Confidence 3
No 429
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1e-35 Score=368.26 Aligned_cols=212 Identities=18% Similarity=0.232 Sum_probs=184.5
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|+.++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999974 34999999999999999999999999999999999999999999999999887777777888899
Q ss_pred eecCCccc--c-------CCchhhhcCCCCCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1176 IIPQDPNL--F-------EGTIRCNLDPLEEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1176 iVpQdp~l--F-------~gTIr~NLdp~~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
++||+|.+ + ..|+++|+.... ..++++.++++..++.+.... ++ ..||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~-------~~----~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQFGITALLDR-------RF----KYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHcCCHhhhhC-------Cc----ccCCHHHHHHHHHHH
Confidence 99999753 2 358999886431 234567888999988654433 22 479999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHhhc
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEFK-DCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLLED 1321 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl~~ 1321 (1343)
||+.+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 99999999999999999999999999999987643 6899999999999876 999999999999999999998753
No 430
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=350.89 Aligned_cols=202 Identities=27% Similarity=0.407 Sum_probs=168.3
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EE
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AA 518 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~ 518 (1343)
..++++|++++|. +.++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3699999999984 357999999999999999999999999999999999999999999999883 79
Q ss_pred EEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHH
Q 000702 519 YVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARA 590 (1343)
Q Consensus 519 ~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARa 590 (1343)
||+|++-+|. .||+|||.|+.. .+.. +..++++..++. ........+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~-----------~~~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQ-----------EFAKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHHHHHH
Confidence 9999998885 599999998743 2222 223333333332 22345567899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 591 LYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 591 l~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|+.+|+++|||||||+||+...+.+.+.+..... .|.|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999998877654433222 3899999999999864 5999999999999999999998754
No 431
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1e-35 Score=328.97 Aligned_cols=194 Identities=24% Similarity=0.371 Sum_probs=158.8
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eEE
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i~ 518 (1343)
++++|++++|+... ..++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 67899999985321 12799999999999999999999999999999999999999999999987 379
Q ss_pred EEcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHH
Q 000702 519 YVSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARA 590 (1343)
Q Consensus 519 ~v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARa 590 (1343)
|++|++.++. .|++||+.+... .+. ++..++++..++ .........+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGM-----------EELLDRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHHhhhhhhcCHHHHHHHHHHHH
Confidence 9999998887 599999976422 111 222333333333 333456778899999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 591 LYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 591 l~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
++.+|+++||||||++||+.+.+.+.+. +... .+|+|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999998777654 4443 358999999999998764 9999999999998754
No 432
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1e-35 Score=332.26 Aligned_cols=202 Identities=28% Similarity=0.420 Sum_probs=163.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TA 517 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i 517 (1343)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46889999984 35799999999999999999999999999999999999999999999876 27
Q ss_pred EEEcccccccCc-cHHHHhccCCC---CCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhcc
Q 000702 518 AYVSQSAWIQSG-NIEENILFGSP---MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQ 593 (1343)
Q Consensus 518 ~~v~Q~~~l~~~-ti~~Ni~~g~~---~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~ 593 (1343)
+|++|++.++.. |++||+.++.+ .......+.+ .+.++.+ |..........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKL-----EELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999988775 99999987532 1111111111 1112222 33344556778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 594 DADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 594 ~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
+|+++||||||++||+.+.+.+.+. ++.. .+++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999998877654 4443 35899999999998765 499999999999999999888753
No 433
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-36 Score=340.15 Aligned_cols=198 Identities=32% Similarity=0.442 Sum_probs=162.6
Q ss_pred EEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------------
Q 000702 453 QIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG----------------- 515 (1343)
Q Consensus 453 ~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g----------------- 515 (1343)
.++|+++.|. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4557777663 35789999999999999999999999999999999999999999999876
Q ss_pred eEEEEccccccc-CccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 TAAYVSQSAWIQ-SGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 ~i~~v~Q~~~l~-~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++|++|++.++ +.|++||+.++.. ++. ++..++++.+++.+. +.....+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGW-----------EHKYPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCCcccCCHHHHHHHHH
Confidence 379999999887 5799999987532 222 233444444444332 334556899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|||++.+|+++||||||++||+.+.+.+.+. +..+. .|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999998877654 44432 3899999999999875 499999999999999999998865
Q ss_pred c
Q 000702 665 A 665 (1343)
Q Consensus 665 ~ 665 (1343)
.
T Consensus 251 ~ 251 (269)
T cd03294 251 N 251 (269)
T ss_pred C
Confidence 3
No 434
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=334.73 Aligned_cols=204 Identities=26% Similarity=0.413 Sum_probs=169.4
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g--------- 515 (1343)
..++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 3689999999984 2479999999999999999999999999999999999986 4899998876
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC----CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP----MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|++.++..|++||+.++.. .+. ++.+++++..++..++ .+.+++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHHH
Confidence 3789999999988999999987632 222 2233444444443222 233556788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999877765 4544446789999999999886 49999999999999999998
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++..
T Consensus 241 ~~~~ 244 (260)
T PRK10744 241 TIFT 244 (260)
T ss_pred HHHh
Confidence 8864
No 435
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-35 Score=350.74 Aligned_cols=200 Identities=26% Similarity=0.425 Sum_probs=168.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 588999999984 36799999999999999999999999999999999999999999999988 27
Q ss_pred EEEcccccc-cCccHHHHhccCCC-----C---C---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 518 AYVSQSAWI-QSGNIEENILFGSP-----M---D---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 518 ~~v~Q~~~l-~~~ti~~Ni~~g~~-----~---~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
+||+|++.+ ++.|++||+.++.. + . .++.+++++..++.+ .......+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~-----------~~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQ-----------FADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHH
Confidence 999999876 78999999988742 1 1 223344444444432 22345678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
+|||||+++|+++||||||++||+.....+++. ++.+ .+|+|+|++||+++.+. .||++++|++|++++.|++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999998887654 4443 35899999999999985 59999999999999999999987
Q ss_pred hc
Q 000702 664 QA 665 (1343)
Q Consensus 664 ~~ 665 (1343)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 53
No 436
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-35 Score=327.74 Aligned_cols=191 Identities=29% Similarity=0.441 Sum_probs=157.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------eEEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------TAAYV 520 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------~i~~v 520 (1343)
++++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999998842 5799999999999999999999999999999999999999999999987 38999
Q ss_pred cccccccC-ccHHHHhccCCC---CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 521 SQSAWIQS-GNIEENILFGSP---MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 521 ~Q~~~l~~-~ti~~Ni~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|++.++. .|++||+.++.. .+.++ ..++++..++ .........+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQI-----------EHLLDRKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------HHHHhCChhhCCHHHHHHHHHHHHHh
Confidence 99998874 699999987632 22222 2223333333 22344566789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
.+|+++||||||++||+++.+.+.+. ++.. . .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999998887654 4443 2 38999999999998765 9999999999998765
No 437
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-36 Score=334.56 Aligned_cols=201 Identities=31% Similarity=0.458 Sum_probs=163.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TAA 518 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i~ 518 (1343)
++++|++++|++. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 3678999998531 5699999999999999999999999999999999999999999999987 379
Q ss_pred EEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHH
Q 000702 519 YVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARA 590 (1343)
Q Consensus 519 ~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARa 590 (1343)
|++|+|.++. .|++||+.++.. .+.+ +..++++..++.. .....+.+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 799999987632 2211 2222333332221 013456678999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 591 LYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 591 l~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
++.+|+++||||||++||+.+.+.+.+. +... . +|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999997777654 4443 2 3899999999999765 599999999999999999888754
No 438
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=338.37 Aligned_cols=202 Identities=28% Similarity=0.430 Sum_probs=168.9
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCC---cEEEECC-----------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKIS---GEVRLCG----------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~---G~i~~~g----------- 515 (1343)
..++++|+++.|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~-~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPD-SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCC-CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 36899999999853 23579999999999999999999999999999999999999987 8999887
Q ss_pred --eEEEEccccc--ccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 --TAAYVSQSAW--IQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 --~i~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++|++|+|+ +++.|++|||.|+.. .+.+ +..++++.+++.+ .......+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLD-----------YIDSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChh-----------HhcCCcccCCHHHHHH
Confidence 3799999984 678999999998632 2222 2334444444433 2345567999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
++||||++.+|+++||||||++||+.+.+.+.+. +..+. .|+|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999998887664 44432 38999999999998878999999999999999999887
Q ss_pred Hh
Q 000702 663 LQ 664 (1343)
Q Consensus 663 ~~ 664 (1343)
..
T Consensus 231 ~~ 232 (282)
T PRK13640 231 FS 232 (282)
T ss_pred hc
Confidence 64
No 439
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=336.04 Aligned_cols=205 Identities=22% Similarity=0.392 Sum_probs=169.6
Q ss_pred cceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC--------
Q 000702 449 NVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG-------- 515 (1343)
Q Consensus 449 ~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g-------- 515 (1343)
...++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 34799999999984 35799999999999999999999999999999999999975 899999877
Q ss_pred -------eEEEEcccccccCccHHHHhccCCC---C--CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCCh
Q 000702 516 -------TAAYVSQSAWIQSGNIEENILFGSP---M--DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSG 579 (1343)
Q Consensus 516 -------~i~~v~Q~~~l~~~ti~~Ni~~g~~---~--~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSg 579 (1343)
.++|++|+|.++..|++||+.++.. . .. ++.+++++.+++.+.+. +..+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 2799999999998899999987632 1 11 22334444444432221 234567789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecC
Q 000702 580 GQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 580 GQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~ 658 (1343)
|||||++||||++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999777654 55555557899999999998854 99999999999999999
Q ss_pred hHHHHh
Q 000702 659 YDDLLQ 664 (1343)
Q Consensus 659 ~~~l~~ 664 (1343)
.+++..
T Consensus 246 ~~~~~~ 251 (267)
T PRK14235 246 TEKMFT 251 (267)
T ss_pred HHHHHh
Confidence 988864
No 440
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-35 Score=341.89 Aligned_cols=201 Identities=27% Similarity=0.404 Sum_probs=165.2
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eE
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TA 517 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i 517 (1343)
..++++|++++|. ++++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 3689999999984 35799999999999999999999999999999999999999999999987 38
Q ss_pred EEEccccccc-CccHHHHhccC-C--CCCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 518 AYVSQSAWIQ-SGNIEENILFG-S--PMDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 518 ~~v~Q~~~l~-~~ti~~Ni~~g-~--~~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
+|++|++.++ ..|++||+.+. . ..+... .+++++.+++. ........+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLE-----------SKADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCh-----------hHhcCchhhCCHHHHHHHHHHH
Confidence 9999998877 57999999752 1 122221 22223333222 2233456789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 590 ALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 590 al~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999888766443333358999999999998865 99999999999999999998864
No 441
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-35 Score=368.43 Aligned_cols=220 Identities=24% Similarity=0.384 Sum_probs=182.9
Q ss_pred eEEEEEEEEEEcCC--CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC-----CcceEEEcCeecCCCChH
Q 000702 1096 TIELIDLKVRYGEN--LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP-----ACGRIIIDNIDISTIGLH 1168 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~--~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~-----~~G~I~IdG~di~~i~l~ 1168 (1343)
-|+++|++++|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999642 24699999999999999999999999999999999999986 799999999999877654
Q ss_pred H---Hh-hcceeecCCcc--ccC-CchhhhcCC----CCCCC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1169 D---LR-SRLGIIPQDPN--LFE-GTIRCNLDP----LEEHS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1169 ~---LR-~~i~iVpQdp~--lF~-gTIr~NLdp----~~~~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
+ +| ++++||||+|. ++. -|+++|+.. ....+ .+++.++++.+++.+.... +|..+ .+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----~~~~~----~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKR----LTDYP----HQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH----HhhCC----cc
Confidence 3 33 57999999985 443 488888741 11111 2457788999988642211 12222 57
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCcccccc-cCEEEEEeCCEEe
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF--KDCTVCTIAHRIPTVID-SDLVLVLSDGRVA 1310 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~iv 1310 (1343)
||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998854 37899999999999875 9999999999999
Q ss_pred eecChhHHhhcCC
Q 000702 1311 EFDTPGRLLEDKS 1323 (1343)
Q Consensus 1311 e~g~p~eLl~~~~ 1323 (1343)
+.|++++++..+.
T Consensus 237 ~~g~~~~~~~~~~ 249 (529)
T PRK15134 237 EQNRAATLFSAPT 249 (529)
T ss_pred EeCCHHHHhhCCC
Confidence 9999999986543
No 442
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-35 Score=322.68 Aligned_cols=193 Identities=23% Similarity=0.308 Sum_probs=165.9
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999974 359999999999999999999999999999999999999999999999999875 34567889999
Q ss_pred ecCCcccc-CCchhhhcCCCC--CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCCC
Q 000702 1177 IPQDPNLF-EGTIRCNLDPLE--EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQAR 1253 (1343)
Q Consensus 1177 VpQdp~lF-~gTIr~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~~ 1253 (1343)
+||++.++ ..|+++|+.... ...+..+.++++..++.+.. |.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLI-------DYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhh-------hCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999987 579999986321 12334677788888775433 2333 3699999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccccCEEEE
Q 000702 1254 ILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVIDSDLVLV 1303 (1343)
Q Consensus 1254 ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~~DrIlv 1303 (1343)
+|||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999753 47899999999999999996543
No 443
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.8e-35 Score=344.86 Aligned_cols=203 Identities=27% Similarity=0.412 Sum_probs=166.9
Q ss_pred CcceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------
Q 000702 448 TNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------ 515 (1343)
Q Consensus 448 ~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------ 515 (1343)
....|+++|++++|. ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 38 ~~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~ 114 (340)
T PRK13536 38 STVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARA 114 (340)
T ss_pred CceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhc
Confidence 344699999999984 35799999999999999999999999999999999999999999999987
Q ss_pred eEEEEccccccc-CccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 TAAYVSQSAWIQ-SGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 ~i~~v~Q~~~l~-~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++|+||++.++ ..|++||+.+... .+.. +.+++++.+++ ++ ....+..+||||||||++|
T Consensus 115 ~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~----~~~~~~~~LS~G~kqrv~l 183 (340)
T PRK13536 115 RIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARL-------ES----KADARVSDLSGGMKRRLTL 183 (340)
T ss_pred cEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------ch----hhCCChhhCCHHHHHHHHH
Confidence 389999998875 6799999975321 1222 12223333322 21 2234556899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
||||..+|+++||||||++||+.+.+.+++.+.....+|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 184 A~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 184 ARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred HHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999888876543333358999999999999865 99999999999999999999864
No 444
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-36 Score=297.65 Aligned_cols=221 Identities=29% Similarity=0.449 Sum_probs=189.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCC----------
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTI---------- 1165 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i---------- 1165 (1343)
.++++|+..+|++. .|||+||++.++|+.|.|+|.|||||||+++++.=+-.|+.|+|.++|..|+..
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 58999999999865 499999999999999999999999999999999999999999999999887532
Q ss_pred ---ChHHHhhcceeecCCccccCC-chhhhcC--CCC---CCCHHHH---HHHHHHcCCchHHhcccCCCCcccccCCCC
Q 000702 1166 ---GLHDLRSRLGIIPQDPNLFEG-TIRCNLD--PLE---EHSDREI---WEALDKSQLGDIVRGKDQKLETPVLENGDN 1233 (1343)
Q Consensus 1166 ---~l~~LR~~i~iVpQdp~lF~g-TIr~NLd--p~~---~~sd~ei---~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1233 (1343)
.++.+|.++++|+|+-.|.+- |+-+|.- |-. .-.++.+ ..-|.++|+.+.-..-| ..
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----------~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-----------AH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------cc
Confidence 245689999999999999975 9999984 432 2223333 34578899887665444 46
Q ss_pred CChhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEee
Q 000702 1234 WSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAE 1311 (1343)
Q Consensus 1234 LSgGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive 1311 (1343)
|||||+||.+|||||.-+|+++++|||||+||+|--..+.+.+++.. .++|+++|||.+....+ +..|+.|++|.|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 89999999999999999999999999999999999888888887754 48999999999999988 88999999999999
Q ss_pred ecChhHHhhcCCc-HHHHH
Q 000702 1312 FDTPGRLLEDKSS-MFLKL 1329 (1343)
Q Consensus 1312 ~g~p~eLl~~~~~-~f~~l 1329 (1343)
.|+|+++..++.| ..++.
T Consensus 233 ~G~P~qvf~nP~S~RlkqF 251 (256)
T COG4598 233 EGPPEQVFGNPQSPRLKQF 251 (256)
T ss_pred cCChHHHhcCCCCHHHHHH
Confidence 9999999999877 33443
No 445
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-35 Score=334.16 Aligned_cols=205 Identities=23% Similarity=0.397 Sum_probs=168.1
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc--C---CCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP--K---ISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~--~---~~G~i~~~g--------- 515 (1343)
..++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 3689999999884 3579999999999999999999999999999999999987 3 589998876
Q ss_pred ------eEEEEcccccccCccHHHHhccCCCC----CHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSPM----DKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|++.++..|++||+.|+... +++. .+++++..++.+.+ .+..+..+.+|||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq 160 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQ 160 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHH
Confidence 27999999999989999999876321 2221 22233333332221 123456778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+++...+.+ ++....+++|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 161 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 239 (259)
T PRK14274 161 QQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEE-LILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTN 239 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999777754 5655556799999999999876 49999999999999999999
Q ss_pred HHHhc
Q 000702 661 DLLQA 665 (1343)
Q Consensus 661 ~l~~~ 665 (1343)
++...
T Consensus 240 ~~~~~ 244 (259)
T PRK14274 240 KMFSN 244 (259)
T ss_pred HHhhC
Confidence 98653
No 446
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.3e-35 Score=324.68 Aligned_cols=195 Identities=23% Similarity=0.265 Sum_probs=167.9
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999974 3599999999999999999999999999999999999999999999999998752 3466799
Q ss_pred eecCCccccCC-chhhhcCCC----CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhc
Q 000702 1176 IIPQDPNLFEG-TIRCNLDPL----EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLK 1250 (1343)
Q Consensus 1176 iVpQdp~lF~g-TIr~NLdp~----~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~ 1250 (1343)
|+||+|.+|.+ |+++|+... +...++.+.++++..++.+. +++.+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGY-------EDTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhh-------ccCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999998532 22233456778888877543 23333 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeC
Q 000702 1251 QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSD 1306 (1343)
Q Consensus 1251 ~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~ 1306 (1343)
+|++|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ |||+++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998653 46899999999999865 999999985
No 447
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.14 Aligned_cols=203 Identities=25% Similarity=0.450 Sum_probs=165.6
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------ 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------ 516 (1343)
.++++|++++|.... .+++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999985321 146999999999999999999999999999999999999999999998772
Q ss_pred -----EEEEcccc--cccCccHHHHhccCCC---CCHHHH----HHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 517 -----AAYVSQSA--WIQSGNIEENILFGSP---MDKAKY----KKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 517 -----i~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~~~----~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
++|++|+| .+++.|++|||.++.. .+.+.. +++++..++.. .....+..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 79999998 6788999999987532 222222 22222222221 123456788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+. +..+ .+++|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999998877654 4443 34899999999999886 49999999999999999998
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++..
T Consensus 231 ~~~~ 234 (280)
T PRK13649 231 DIFQ 234 (280)
T ss_pred HHhc
Confidence 8764
No 448
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=340.08 Aligned_cols=203 Identities=25% Similarity=0.397 Sum_probs=164.0
Q ss_pred eEEEEeeEEEecCCC--CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------
Q 000702 451 AIQIENAEFCWYPSS--SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~--~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------- 515 (1343)
.++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 589999999985321 13599999999999999999999999999999999999999999998876
Q ss_pred -----eEEEEccccc--ccCccHHHHhccCCC---CCHHHH-H---HHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 -----TAAYVSQSAW--IQSGNIEENILFGSP---MDKAKY-K---KVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 -----~i~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~~~~-~---~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|+|. ++..|++||+.|+.. ...+.. + ++++.+++ +. ...+....+|||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L-------~~---~~~~~~~~~LS~Gq 155 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQL-------PE---DYVKRSPFELSGGQ 155 (289)
T ss_pred HHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-------Ch---hHhcCChhhCCHHH
Confidence 2799999984 677899999988642 122111 1 12222222 11 12346678899999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecC
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~ 658 (1343)
|||++||||++.+|+++||||||++||+.+.+.+++. +..+. .|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 156 ~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (289)
T PRK13645 156 KRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGS 234 (289)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999998777654 44432 3899999999999875 599999999999999999
Q ss_pred hHHHHh
Q 000702 659 YDDLLQ 664 (1343)
Q Consensus 659 ~~~l~~ 664 (1343)
++++..
T Consensus 235 ~~~~~~ 240 (289)
T PRK13645 235 PFEIFS 240 (289)
T ss_pred HHHHhc
Confidence 988754
No 449
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.5e-35 Score=330.64 Aligned_cols=198 Identities=30% Similarity=0.452 Sum_probs=164.8
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------e
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------T 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------~ 516 (1343)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 67899999984 35799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEcccccccC-ccHHHHhccCCC----CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSP----MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~----~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
++|++|++.++. .|++||+.++.. .+... ..++++.. |.......+...||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKV-----------GLAERAHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHc-----------CChHHHhcChhhcCHHHHHHHHH
Confidence 799999988775 699999988631 22221 22222222 33333455678899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|||++.+|+++||||||++||+++.+.+.+ ++... .+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 999999999999999999999999887765 45443 358999999999999865 99999999999999999988764
No 450
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=336.20 Aligned_cols=203 Identities=28% Similarity=0.433 Sum_probs=168.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|+.....++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 58999999998633334699999999999999999999999999999999999999999999987 27
Q ss_pred EEEccccc--ccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSAW--IQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+|. ++..|+.|||.++.. ...+ +++++++.+++.. ........||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLD-----------FKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHh-----------HhhCCcccCCHHHHHHHHHH
Confidence 99999983 678899999987632 2222 2334444444432 12345678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-C-CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-A-NKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~-~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||++.+|+++||||||++||+.+.+.+.+. +..+. + |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999998887654 44443 3 8999999999999878999999999999999999988653
No 451
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.7e-35 Score=314.63 Aligned_cols=166 Identities=35% Similarity=0.609 Sum_probs=150.1
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe------------EEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT------------AAY 519 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~------------i~~ 519 (1343)
++++|++++|.. ..+++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~-~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPE-QEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCC-CCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 468899999853 2247999999999999999999999999999999999999999999999883 799
Q ss_pred EcccccccCccHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEE
Q 000702 520 VSQSAWIQSGNIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYL 599 (1343)
Q Consensus 520 v~Q~~~l~~~ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ill 599 (1343)
++|++++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCeEEEec
Q 000702 600 LDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAG 657 (1343)
Q Consensus 600 LDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g 657 (1343)
|||||++||+.+.+.+++. +....+++|+|++||+++.++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~-l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSL-IFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999998877654 44445689999999999999889999999999998764
No 452
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=334.54 Aligned_cols=200 Identities=27% Similarity=0.424 Sum_probs=166.0
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------- 515 (1343)
+.++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 3589999999984 35799999999999999999999999999999999999999999998876
Q ss_pred ------------eEEEEcccccccC-ccHHHHhccCC----CCCHH----HHHHHHHHhhhhhhHhhccCCCcccc-CCC
Q 000702 516 ------------TAAYVSQSAWIQS-GNIEENILFGS----PMDKA----KYKKVIHACSLKKDLELFSHGDQTII-GDR 573 (1343)
Q Consensus 516 ------------~i~~v~Q~~~l~~-~ti~~Ni~~g~----~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~i-g~~ 573 (1343)
.++|++|++.++. .|++||+.++. ..+.. +..++++..++ .... +..
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGI-----------DERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCC-----------ChhhhhCC
Confidence 2799999999886 59999998742 12221 22222332222 2222 456
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCcccc-CCEEEEEeCC
Q 000702 574 GINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLPA-ADFILVLKEG 651 (1343)
Q Consensus 574 g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G 651 (1343)
..+||||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. +|+|+|+|||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G 228 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQG 228 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECC
Confidence 78899999999999999999999999999999999999887765 444443 58999999999999875 9999999999
Q ss_pred eEEEecChHHHHh
Q 000702 652 RIIQAGKYDDLLQ 664 (1343)
Q Consensus 652 ~i~~~g~~~~l~~ 664 (1343)
++++.|+++++..
T Consensus 229 ~i~~~~~~~~~~~ 241 (257)
T PRK10619 229 KIEEEGAPEQLFG 241 (257)
T ss_pred EEEEeCCHHHhhh
Confidence 9999999988764
No 453
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-35 Score=334.01 Aligned_cols=204 Identities=26% Similarity=0.397 Sum_probs=170.8
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g--------- 515 (1343)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4699999999984 3679999999999999999999999999999999999996 5899998876
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC----CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP----MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~----~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|++.++..|++|||.++.. .++ ++..++++.+++.+++ .+..+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHH
Confidence 2799999999998999999988632 111 2233444555543332 234567788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+. .||++++|++|++++.|+.+
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999877765 4555556799999999999875 59999999999999999999
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++..
T Consensus 248 ~~~~ 251 (267)
T PRK14237 248 NIFT 251 (267)
T ss_pred HHhc
Confidence 8864
No 454
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=334.38 Aligned_cols=202 Identities=29% Similarity=0.469 Sum_probs=167.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|+++.|+. +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 7 ~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 5899999999852 246799999999999999999999999999999999999999999999887 27
Q ss_pred EEEcccc--cccCccHHHHhccCCC---CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSA--WIQSGNIEENILFGSP---MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+| .+++.|++|||.++.. ++.++ ..++++..++.. .......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMED-----------YLDKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HhhCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999988632 23332 233334444432 23456679999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC-CcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALA-NKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
||++.+|+++||||||++||+.+.+.+++.+.....+ ++|+|++||+++.+..||+|++|++|++++.|+.+++..
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999988877643332233 589999999999887899999999999999999888754
No 455
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=301.92 Aligned_cols=212 Identities=26% Similarity=0.419 Sum_probs=184.7
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
|+.+|++++-.. +.+|+++||+++|||.+||+||||||||||+++|.|-..|++|++.++|+++++.+..++-++-++
T Consensus 2 i~a~nls~~~~G--r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAG--RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeec--ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 678899887654 359999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCccc-cCCchhhhcC----CCC---CCCHHH--HHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1177 IPQDPNL-FEGTIRCNLD----PLE---EHSDRE--IWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1177 VpQdp~l-F~gTIr~NLd----p~~---~~sd~e--i~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
.||+..+ |.=|++|-+. |.+ +..+++ ..++|.++++..+-.+. -..|||||+||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~-----------y~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD-----------YRTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc-----------hhhcCchHHHHHHHHH
Confidence 9999976 7889998874 332 222344 67889999987664332 1369999999999999
Q ss_pred HHhc------CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEEEEeCCEEeeecChhHH
Q 000702 1247 ALLK------QARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1247 ALL~------~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~ive~g~p~eL 1318 (1343)
.|.+ ++++|+||||||+||..-...+.++.|+.. .++.|++|=|+|+... .||||++|.+|||+..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9985 346999999999999999999999999865 4689999999999875 5999999999999999999999
Q ss_pred hhc
Q 000702 1319 LED 1321 (1343)
Q Consensus 1319 l~~ 1321 (1343)
+..
T Consensus 229 lt~ 231 (259)
T COG4559 229 LTD 231 (259)
T ss_pred cCH
Confidence 964
No 456
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=334.90 Aligned_cols=205 Identities=22% Similarity=0.339 Sum_probs=167.4
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g--------- 515 (1343)
..++++|++++|. ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 3689999999984 3579999999999999999999999999999999999864 6899998875
Q ss_pred ------eEEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|++.+++.|++||+.++... .. ++..++++.+++..++ ....+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHH
Confidence 37999999999999999999876321 11 1122233333332111 123456788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 248 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTE 248 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999887754 4555555789999999999876 59999999999999999998
Q ss_pred HHHhc
Q 000702 661 DLLQA 665 (1343)
Q Consensus 661 ~l~~~ 665 (1343)
++...
T Consensus 249 ~~~~~ 253 (268)
T PRK14248 249 QIFTS 253 (268)
T ss_pred HHHhC
Confidence 87643
No 457
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=366.28 Aligned_cols=207 Identities=25% Similarity=0.367 Sum_probs=177.4
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCCh-HHHhhcc
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGL-HDLRSRL 1174 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l-~~LR~~i 1174 (1343)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. ..+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976543 3467889
Q ss_pred eeecCCccccCC-chhhhcCCCC-----C-CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHH
Q 000702 1175 GIIPQDPNLFEG-TIRCNLDPLE-----E-HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVS 1243 (1343)
Q Consensus 1175 ~iVpQdp~lF~g-TIr~NLdp~~-----~-~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~ 1243 (1343)
+|+||+|.+|.+ |+++|+.... . .. .+++.++++.+++.+. ++..+ .+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-------PDTPL----KYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-------cCCch----hhCCHHHHHHHH
Confidence 999999998876 9999997421 1 11 2356777888877432 23333 579999999999
Q ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecCh
Q 000702 1244 LGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTP 1315 (1343)
Q Consensus 1244 LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p 1315 (1343)
|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999998764 36899999999999866 999999999999877654
No 458
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-35 Score=322.14 Aligned_cols=194 Identities=27% Similarity=0.355 Sum_probs=167.8
Q ss_pred eEEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhcce
Q 000702 1096 TIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLG 1175 (1343)
Q Consensus 1096 ~I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~ 1175 (1343)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcE
Confidence 3789999999974 359999999999999999999999999999999999999999999999998753 2 2788999
Q ss_pred eecCCcccc-CCchhhhcCCC---CCCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcC
Q 000702 1176 IIPQDPNLF-EGTIRCNLDPL---EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQ 1251 (1343)
Q Consensus 1176 iVpQdp~lF-~gTIr~NLdp~---~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~ 1251 (1343)
++||++.++ ..|+++|+... ....++++.++++..++.+.... ++ .+||||||||++||||++++
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LS~G~~qrl~la~al~~~ 145 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAHL-------PF----GYLSAGQKRRVALARLLVSN 145 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHcC-------Ch----hhcCHHHHHHHHHHHHHhcC
Confidence 999988775 57999998632 12345678899999999764322 22 47999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCcccccccCEEEEEeC
Q 000702 1252 ARILVLDEATASVDTATDNLIQKIIRTE-FKDCTVCTIAHRIPTVIDSDLVLVLSD 1306 (1343)
Q Consensus 1252 ~~ILlLDEaTs~lD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti~~~DrIlvl~~ 1306 (1343)
|++|||||||++||+.+...+.+.|++. -+++|+|++||+++.+.. |+++.++.
T Consensus 146 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 146 RPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 9999999999999999999999999874 347899999999999988 99988854
No 459
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.6e-35 Score=326.85 Aligned_cols=196 Identities=27% Similarity=0.401 Sum_probs=162.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|+++.|. ++++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 7 ~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 589999999984 35799999999999999999999999999999999999999999999987 37
Q ss_pred EEEcccccccCccHHHHhccCCCC-----CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 518 AYVSQSAWIQSGNIEENILFGSPM-----DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 518 ~~v~Q~~~l~~~ti~~Ni~~g~~~-----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|++|++++++.|++||+.++..+ ++++.+++++.+++. .+.....+.+||||||||++||||++
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 999999999999999999874221 122223333333331 12345678899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEe-CCeEEEecChH
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLK-EGRIIQAGKYD 660 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~-~G~i~~~g~~~ 660 (1343)
++|+++||||||++||+.+.+.+.+ ++.... +|+|+|++||+++.++.||++++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNE-IIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999776654 454442 3889999999999988899999995 67777888874
No 460
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=335.63 Aligned_cols=203 Identities=24% Similarity=0.376 Sum_probs=169.6
Q ss_pred eEEEEeeEEEecCCC---CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------
Q 000702 451 AIQIENAEFCWYPSS---SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------ 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~---~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------ 515 (1343)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999985321 35799999999999999999999999999999999999999999999986
Q ss_pred --eEEEEccccc--ccCccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 --TAAYVSQSAW--IQSGNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 --~i~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++|++|+|. ++..|+.||+.|+.. .+. ++.+++++.+++.+. ......+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEY-----------RRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHH
Confidence 2689999984 667799999998732 122 234445555555433 334557899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHH
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 662 (1343)
++||||++.+|+++||||||++||+.+.+.+.+ ++..+ . .|+|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVN-TIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999888765 45444 2 38999999999998877999999999999999999998
Q ss_pred Hhc
Q 000702 663 LQA 665 (1343)
Q Consensus 663 ~~~ 665 (1343)
...
T Consensus 232 ~~~ 234 (280)
T PRK13633 232 FKE 234 (280)
T ss_pred hcC
Confidence 653
No 461
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=325.05 Aligned_cols=192 Identities=29% Similarity=0.427 Sum_probs=157.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------eEEEEcc
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------TAAYVSQ 522 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------~i~~v~Q 522 (1343)
++++|+++.|+ ++++++|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46889999884 35799999999999999999999999999999999999999999999987 3899999
Q ss_pred cccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 523 SAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 523 ~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++.++. .|++||+.++.. ... ++..+.++..++ .........+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLEL-----------SEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCC-----------hHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998776 599999987532 111 122233333333 2334456778999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999888766533322358999999999998765 9999999999998754
No 462
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=332.86 Aligned_cols=204 Identities=25% Similarity=0.374 Sum_probs=167.0
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc--C---CCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP--K---ISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~--~---~~G~i~~~g---------- 515 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|..+ | ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 589999999984 3579999999999999999999999999999999999853 6 589999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCC---C-CHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSP---M-DKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~---~-~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.+++.|++||+.++.. . +++ +..++++.+++...+ .+..+....+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 2799999999999999999987531 1 111 122233333332211 1334567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+++ .+....+++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888765 4555555789999999998875 599999999999999999998
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8653
No 463
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.2e-35 Score=327.00 Aligned_cols=191 Identities=28% Similarity=0.418 Sum_probs=156.5
Q ss_pred EEEEeeEEEecCCC-CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 452 IQIENAEFCWYPSS-SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~-~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 67899999985321 24699999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcccccccC-ccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 --TAAYVSQSAWIQS-GNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 --~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++|++|++.++. .|++||+.++.. ++.. +..++++.+++ .........+||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGL-----------EHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHH
Confidence 2899999998874 699999987421 2221 22233333333 2334456678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeEE
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRII 654 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~ 654 (1343)
+||||++.+|+++||||||++||+++.+.+.+. +..+. .++|+|++||+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 999999999999999999999999998877654 44432 379999999999988889999999999985
No 464
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=333.12 Aligned_cols=204 Identities=25% Similarity=0.416 Sum_probs=168.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcC---ccC--CCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGE---IPK--ISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~---~~~--~~G~i~~~g---------- 515 (1343)
.++++|+++.|. ++++|+|+||++++||+++|+|+||||||||+++|+|+ +++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 588999999984 25799999999999999999999999999999999996 454 589998876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.++..|++||+.++... ++ ++.+++++.+++.+++ .+..+..+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 27999999999989999999875321 11 2233444444443222 1234567889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ .++...+++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999887765 4555556899999999999875 599999999999999999999
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+.++
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 8653
No 465
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=333.44 Aligned_cols=205 Identities=22% Similarity=0.366 Sum_probs=168.9
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g--------- 515 (1343)
..++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999984 2579999999999999999999999999999999999987 5899999876
Q ss_pred ------eEEEEcccccccCccHHHHhccCCCC---CH---HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSPM---DK---AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQ 583 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~~---~~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkq 583 (1343)
.++|++|++.++..|++||+.++... +. ++..++++.+++... ..+.......+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDE-------CKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcch-------hhhhhCCCcccCCHHHHH
Confidence 27999999999888999999987432 11 222333444433221 223445677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeC-----------C
Q 000702 584 RVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKE-----------G 651 (1343)
Q Consensus 584 Ri~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~-----------G 651 (1343)
|++||||++.+|+++||||||++||+.+.+++.+ .++...+++|+|++||+++.+. .||++++|++ |
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999888765 4555556789999999999876 4999999996 6
Q ss_pred eEEEecChHHHHhc
Q 000702 652 RIIQAGKYDDLLQA 665 (1343)
Q Consensus 652 ~i~~~g~~~~l~~~ 665 (1343)
++++.|+.+++...
T Consensus 241 ~~~~~~~~~~~~~~ 254 (269)
T PRK14259 241 YLVEFNETKKIFNS 254 (269)
T ss_pred eEEEeCCHHHHHhC
Confidence 78999999888653
No 466
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.8e-35 Score=329.88 Aligned_cols=200 Identities=31% Similarity=0.446 Sum_probs=164.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
.++++|++++|. ++++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 378999999984 35799999999999999999999999999999999999999999998765
Q ss_pred ------eEEEEcccccccC-ccHHHHhccCC----CCCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChH
Q 000702 516 ------TAAYVSQSAWIQS-GNIEENILFGS----PMDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGG 580 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~-~ti~~Ni~~g~----~~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgG 580 (1343)
.++|++|++.++. .|++||+.++. ..+.+ +..++++.. |..........+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKV-----------GLAGKETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCcchhhCChhhCChH
Confidence 3799999998875 79999998742 12221 122222222 2223345677899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecC
Q 000702 581 QKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGK 658 (1343)
Q Consensus 581 QkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~ 658 (1343)
||||++||||++.+|+++||||||++||+.+.+.+.+. +..+ .+|+|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNT-IRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999998877654 4443 358999999999998865 99999999999999999
Q ss_pred hHHHHhc
Q 000702 659 YDDLLQA 665 (1343)
Q Consensus 659 ~~~l~~~ 665 (1343)
.+++.+.
T Consensus 228 ~~~~~~~ 234 (250)
T PRK11264 228 AKALFAD 234 (250)
T ss_pred HHHHhcC
Confidence 9988643
No 467
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=333.22 Aligned_cols=204 Identities=25% Similarity=0.418 Sum_probs=167.8
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g--------- 515 (1343)
..++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 3689999999874 35799999999999999999999999999999999999975 799998866
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC---CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP---MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.++..|++||+.|+.. .+.+. .+++++.+++..++ .........+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 2799999999988999999987632 22222 23333433332211 1234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+...+.+ +++.+.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999887765 45554458999999999998754 99999999999999999998
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+..
T Consensus 240 ~~~ 242 (258)
T PRK14268 240 IFH 242 (258)
T ss_pred Hhc
Confidence 864
No 468
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-35 Score=327.40 Aligned_cols=205 Identities=23% Similarity=0.355 Sum_probs=164.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 588999999984 35799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEcccccccC-ccHHHHhccCCCC-CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSPM-DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~~-~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++|++|++.++. .|++||+.++... +....++.++. -++.++... ........+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~l~~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKW-----VYELFPRLH-ERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHH-----HHHHHHHHH-HHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 799999998887 5999999886432 22222211111 111111111 112346678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999988776644332335899999999998765 599999999999999999998864
No 469
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=324.81 Aligned_cols=190 Identities=25% Similarity=0.409 Sum_probs=157.4
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC------------eEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG------------TAAY 519 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------------~i~~ 519 (1343)
++++|+++.|. ++++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 46899999984 247999999999999 9999999999999999999999999999999987 3799
Q ss_pred EcccccccCc-cHHHHhccCCC---CC----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 520 VSQSAWIQSG-NIEENILFGSP---MD----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 520 v~Q~~~l~~~-ti~~Ni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
++|++.++.. |++||+.+... .+ +++.+++++.+++.+. ......+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDR-----------AKKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHH-----------HhCchhhCCHHHHHHHHHHHHH
Confidence 9999988865 99999987421 11 1233444444444322 2245578999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEec
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAG 657 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g 657 (1343)
+++|+++||||||++||+.+.+.+.+ .++...+++|+|++||+++.+. .||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999887765 4555545799999999999886 49999999999998765
No 470
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.9e-35 Score=335.09 Aligned_cols=200 Identities=27% Similarity=0.359 Sum_probs=165.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------- 515 (1343)
.++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 7 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 589999999984 35799999999999999999999999999999999999999999999886
Q ss_pred -eEEEEcccccccCc-cHHHHhccCCC----CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 516 -TAAYVSQSAWIQSG-NIEENILFGSP----MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 516 -~i~~v~Q~~~l~~~-ti~~Ni~~g~~----~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
.++|++|++.++.. |++||+.++.. .+.. +..+.++.+++ .........+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGL-----------RGAAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHH
Confidence 27899999988875 99999987421 2221 12222333332 2223445678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 662 (1343)
+||||++.+|+++||||||++||+.+.+.+.+. +..+. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQAL 231 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999998877654 44432 37999999999998765 999999999999999999998
Q ss_pred Hhc
Q 000702 663 LQA 665 (1343)
Q Consensus 663 ~~~ 665 (1343)
.+.
T Consensus 232 ~~~ 234 (269)
T PRK11831 232 QAN 234 (269)
T ss_pred hcC
Confidence 754
No 471
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-35 Score=331.68 Aligned_cols=199 Identities=27% Similarity=0.438 Sum_probs=165.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------TA 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~i 517 (1343)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 378999999984 35799999999999999999999999999999999999999999999987 28
Q ss_pred EEEcccccccCc-cHHHHhccCCC-----C---CH---HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHH
Q 000702 518 AYVSQSAWIQSG-NIEENILFGSP-----M---DK---AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRV 585 (1343)
Q Consensus 518 ~~v~Q~~~l~~~-ti~~Ni~~g~~-----~---~~---~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi 585 (1343)
+|++|++.++.+ |++||+.++.. + .. ++.+++++.+++. .........||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRIN-----------HLADRRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCH-----------HHHcCCcccCCHHHHHHH
Confidence 999999987765 99999988631 1 11 1223333333332 223456778999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000702 586 QLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 586 ~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
+||||++.+|+++||||||++||+.+.+.+.+. +..+ .+|+|+|++||+++.+. .||++++|++|+++..|+.+++.
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRL-MRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 999999999999999999999999998777654 4443 35899999999999876 49999999999999999998875
Q ss_pred h
Q 000702 664 Q 664 (1343)
Q Consensus 664 ~ 664 (1343)
.
T Consensus 227 ~ 227 (255)
T PRK11231 227 T 227 (255)
T ss_pred C
Confidence 4
No 472
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=331.12 Aligned_cols=204 Identities=24% Similarity=0.384 Sum_probs=169.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g---------- 515 (1343)
.++++|+++.|. ++++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 588999999984 35799999999999999999999999999999999999875 799999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.++..|++||+.|+... +. +++.++++.+++.+++. ...+.+...||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 27999999999999999999876321 11 22334555555433222 224457789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+...+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999887765 45555557999999999998765 99999999999999999998
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 7643
No 473
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=330.52 Aligned_cols=203 Identities=26% Similarity=0.392 Sum_probs=167.1
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccC-----CCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPK-----ISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~-----~~G~i~~~g---------- 515 (1343)
.++++|+++.|. ++++++|+||+|++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 488999999984 25799999999999999999999999999999999998763 689999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.+++.|++||+.++... +. ++..++++.+++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 27999999998889999999886321 11 22233333443332221 234567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999877754 55555568999999999998765 99999999999999999988
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+..
T Consensus 232 ~~~ 234 (250)
T PRK14240 232 LFT 234 (250)
T ss_pred HHh
Confidence 754
No 474
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=330.36 Aligned_cols=203 Identities=26% Similarity=0.397 Sum_probs=167.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCC-----CcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKI-----SGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~-----~G~i~~~g---------- 515 (1343)
.++++|+++.|. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|. +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 588999999984 357999999999999999999999999999999999999987 69998765
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC----CHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM----DKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
.++|++|++.++..|++||+.++..+ .+++ .+++++..++.+. ..+..+..+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDE-------VKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchh-------hhhHhhCCcccCCHHHH
Confidence 38999999999999999999986421 1111 2222222232221 12345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+...+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999877755 55555568999999999998865 89999999999999999988
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+..
T Consensus 233 ~~~ 235 (251)
T PRK14249 233 IFS 235 (251)
T ss_pred HHh
Confidence 754
No 475
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=331.90 Aligned_cols=204 Identities=28% Similarity=0.429 Sum_probs=167.9
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECCe---------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCGT--------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g~--------- 516 (1343)
.++++|++|+|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 589999999984 2579999999999999999999999999999999999997 47999988762
Q ss_pred ------EEEEcccccccCccHHHHhccCCCC----CH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHH
Q 000702 517 ------AAYVSQSAWIQSGNIEENILFGSPM----DK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQK 582 (1343)
Q Consensus 517 ------i~~v~Q~~~l~~~ti~~Ni~~g~~~----~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQk 582 (1343)
++|++|++.++..|++||+.++... +. ++..++++.+++..+. ....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 7899999999999999999876321 11 2233344444442211 1223467789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000702 583 QRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 583 qRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||++||||++.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999777765 45555567899999999998765 99999999999999999988
Q ss_pred HHhc
Q 000702 662 LLQA 665 (1343)
Q Consensus 662 l~~~ 665 (1343)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14251 233 MFIA 236 (251)
T ss_pred HHhC
Confidence 7643
No 476
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=332.20 Aligned_cols=202 Identities=23% Similarity=0.356 Sum_probs=166.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------A 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i 517 (1343)
.++++|+++.|.. ..+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 7 ~l~i~~l~~~~~~-~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQS-DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCC-CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 5899999999853 2346999999999999999999999999999999999999999999999882 7
Q ss_pred EEEccccc--ccCccHHHHhccCCC---CCHHH----HHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSAW--IQSGNIEENILFGSP---MDKAK----YKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~~--l~~~ti~~Ni~~g~~---~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+|+ ++..|+++|+.|+.. ...+. .+++++..++.+ .......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-----------RADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCCcccCCHHHHHHHHHH
Confidence 99999985 566789999988732 22222 222333333221 23356678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||++.+|+++||||||++||+.+.+.+++. +.... .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999998877654 44433 37999999999998877999999999999999999987653
No 477
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=331.31 Aligned_cols=205 Identities=20% Similarity=0.348 Sum_probs=165.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|+++.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999984 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEcccccccC-ccHHHHhccCCC-----------C-----CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCCh
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSP-----------M-----DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSG 579 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~-----------~-----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSg 579 (1343)
++|++|++.++. .|++||+.++.. + .+.. .+..+ ...+.++.+ |.....+.+..+|||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~l~~~--gl~~~~~~~~~~LS~ 156 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAE-SEALD--RAATWLERV--GLLEHANRQAGNLAY 156 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccch-hHHHH--HHHHHHHhC--ChhhhhhCChhhCCH
Confidence 689999999887 499999998631 0 0000 00000 011112222 334455677889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cC-CcEEEEEecCCCcccc-CCEEEEEeCCeEEEe
Q 000702 580 GQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LA-NKTVIFVTHQVEFLPA-ADFILVLKEGRIIQA 656 (1343)
Q Consensus 580 GQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~-~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~ 656 (1343)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +..+ .+ |+|+|++||+++.+.. ||++++|++|++++.
T Consensus 157 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~ 235 (255)
T PRK11300 157 GQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDEL-IAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLAN 235 (255)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEec
Confidence 999999999999999999999999999999998877654 4443 33 7899999999998865 999999999999999
Q ss_pred cChHHHHh
Q 000702 657 GKYDDLLQ 664 (1343)
Q Consensus 657 g~~~~l~~ 664 (1343)
|+.+++..
T Consensus 236 ~~~~~~~~ 243 (255)
T PRK11300 236 GTPEEIRN 243 (255)
T ss_pred CCHHHHhh
Confidence 99888754
No 478
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=4.6e-35 Score=308.52 Aligned_cols=162 Identities=28% Similarity=0.437 Sum_probs=145.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--eEEEEcccccccCc
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--TAAYVSQSAWIQSG 529 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--~i~~v~Q~~~l~~~ 529 (1343)
++++|++++|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++++++.
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 468899999843 25799999999999999999999999999999999999999999999987 79999999999999
Q ss_pred cHHHHhccCCCCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000702 530 NIEENILFGSPMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDA 609 (1343)
Q Consensus 530 ti~~Ni~~g~~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~ 609 (1343)
|++||+.++ ....||||||||++||||++.+|+++||||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999864 2468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEecCCCccccCCEEEEEeCCe
Q 000702 610 HTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGR 652 (1343)
Q Consensus 610 ~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~~d~i~~l~~G~ 652 (1343)
++.+.+.+ .+... ++|+|++||+++....||++++|++|.
T Consensus 125 ~~~~~l~~-~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 125 ESEDRLYQ-LLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHHH-HHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99887765 44443 689999999998777799999998753
No 479
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=333.05 Aligned_cols=200 Identities=27% Similarity=0.373 Sum_probs=165.5
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-------------e
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------T 516 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~ 516 (1343)
..++++|+++.|. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 3689999999984 25799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEccccccc-CccHHHHhccCCC--------CC---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSP--------MD---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~--------~~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
++|++|++.++ ..|++||+.++.. .. +++.+++++.+++.+. +.....+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPL-----------AHRLVDSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCCHHHHHH
Confidence 79999997654 4599999987631 11 1233444555544332 234456899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
++||||+..+|+++||||||++||+.+.+.+.+. +..+. .|+|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999998877654 44432 3899999999999886 599999999999999999988
Q ss_pred HHh
Q 000702 662 LLQ 664 (1343)
Q Consensus 662 l~~ 664 (1343)
+..
T Consensus 235 ~~~ 237 (265)
T PRK10575 235 LMR 237 (265)
T ss_pred hcC
Confidence 754
No 480
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=364.16 Aligned_cols=208 Identities=21% Similarity=0.322 Sum_probs=176.4
Q ss_pred EEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChH-HHhhcceee
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLH-DLRSRLGII 1177 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~-~LR~~i~iV 1177 (1343)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++++||
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3699999999999999999999999999999999999999999999999999766543 457789999
Q ss_pred cCCccccC-CchhhhcCCCC----C--CCH----HHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHH
Q 000702 1178 PQDPNLFE-GTIRCNLDPLE----E--HSD----REIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGR 1246 (1343)
Q Consensus 1178 pQdp~lF~-gTIr~NLdp~~----~--~sd----~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LAR 1246 (1343)
||++.+|. .|+++|+.... . .+. +++.++++..++.+.. +.. ..+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDP-------RAK----VATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCc-------cCc----hhhCCHHHHHHHHHHH
Confidence 99998775 49999997321 1 122 2355666766664322 222 3579999999999999
Q ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1247 ALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1247 ALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998753 47899999999998865 9999999999999999998874
No 481
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.5e-35 Score=329.14 Aligned_cols=208 Identities=24% Similarity=0.352 Sum_probs=166.8
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 378999999884 25799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcccccccCc-cHHHHhccCCCCCHHHH------HHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 517 AAYVSQSAWIQSG-NIEENILFGSPMDKAKY------KKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 517 i~~v~Q~~~l~~~-ti~~Ni~~g~~~~~~~~------~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
++|++|++.++.+ |++||+.++...+...+ ..........+.++.+ |..........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 7999999988875 99999988632110000 0000000111222222 3334455677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000702 590 ALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 590 al~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 9999999999999999999999887765 45555557999999999999875 99999999999999999988753
No 482
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4e-35 Score=326.92 Aligned_cols=197 Identities=29% Similarity=0.489 Sum_probs=162.9
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------TA 517 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~i 517 (1343)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 46899999984 25799999999999999999999999999999999999999999999886 27
Q ss_pred EEEcccccccCc-cHHHHhccCCCC-C---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 518 AYVSQSAWIQSG-NIEENILFGSPM-D---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 518 ~~v~Q~~~l~~~-ti~~Ni~~g~~~-~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|++|++.++.. |++||+.++... . .+..+++++..+ +..........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999988875 999999876321 1 112233333222 1122344667789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDL 662 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 662 (1343)
.+|+++||||||++||+.+.+.+.+. +.... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999998877654 44433 37999999999998875 999999999999999999886
No 483
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.7e-35 Score=320.27 Aligned_cols=192 Identities=22% Similarity=0.322 Sum_probs=164.3
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEcCeecCCCChHHHhhccee
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999975 36999999999999999999999999999999999999999999999999998765 456788999
Q ss_pred ecCCccccC-CchhhhcCCCC---CCCHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHHHHHHHHHhcCC
Q 000702 1177 IPQDPNLFE-GTIRCNLDPLE---EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1177 VpQdp~lF~-gTIr~NLdp~~---~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALL~~~ 1252 (1343)
+||++.+|. .|+++|+.... ...++++.++++..++.++... .+ .+||+|||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~----~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFEDL-------PA----AQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhcC-------Ch----hhcCHHHHHHHHHHHHHhcCC
Confidence 999999886 69999995321 1123468889999998766432 22 479999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCcccccccCEEEE
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTE-FKDCTVCTIAHRIPTVIDSDLVLV 1303 (1343)
Q Consensus 1253 ~ILlLDEaTs~lD~~te~~I~~~l~~~-~~~~TvI~IaHrl~ti~~~DrIlv 1303 (1343)
++|||||||++||..+.+.+.+.|++. .++.|+|++||+...+ .||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 999999999999999999999999875 3478999999998443 4577765
No 484
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=333.18 Aligned_cols=205 Identities=22% Similarity=0.354 Sum_probs=168.2
Q ss_pred ceEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000702 450 VAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG--------- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g--------- 515 (1343)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 23 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYG---EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 3699999999984 2579999999999999999999999999999999999987 6999999876
Q ss_pred ------eEEEEcccccccCccHHHHhccCCC---C-CHHHH----HHHHHHhhhhhhHhhccCCCccccCCCCCCCChHH
Q 000702 516 ------TAAYVSQSAWIQSGNIEENILFGSP---M-DKAKY----KKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 ------~i~~v~Q~~~l~~~ti~~Ni~~g~~---~-~~~~~----~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQ 581 (1343)
.++|++|++.++..|++||+.++.. . ++... .+.++..++.++ .....+..+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------l~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDE-------LKDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------HHHHHhcCcccCCHHH
Confidence 2799999999998999999987532 1 11111 122222222112 2234467788999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChH
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 582 kqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 660 (1343)
|||++||||++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEE-LVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999887765 55555567999999999998764 9999999999999999999
Q ss_pred HHHhc
Q 000702 661 DLLQA 665 (1343)
Q Consensus 661 ~l~~~ 665 (1343)
++...
T Consensus 252 ~~~~~ 256 (271)
T PRK14238 252 KIFSN 256 (271)
T ss_pred HHHcC
Confidence 88643
No 485
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.3e-35 Score=325.50 Aligned_cols=194 Identities=29% Similarity=0.414 Sum_probs=158.9
Q ss_pred eEEEEeeEEEecCCCC-CCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------
Q 000702 451 AIQIENAEFCWYPSSS-RPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-------------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~-~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------- 515 (1343)
.++++|++++|..... .++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999853221 3599999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcccccccC-ccHHHHhccCCC---CC----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 ---TAAYVSQSAWIQS-GNIEENILFGSP---MD----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 ---~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++|++|++.++. .|++||+.++.. .+ .++..++++.+++.+. +.....+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKR-----------LDHLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhH-----------hhCChhhCCHHHHHH
Confidence 3799999998876 599999986421 11 1233444444444332 234456899999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-c-CCcEEEEEecCCCccccCCEEEEEeCCeEEEe
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-L-ANKTVIFVTHQVEFLPAADFILVLKEGRIIQA 656 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~-~~~t~i~vtH~~~~l~~~d~i~~l~~G~i~~~ 656 (1343)
++||||++.+|+++||||||++||+.+.+.+++. +... . .|+|+|++||+++.+..||++++|++|+++++
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999998777654 4443 2 37899999999998877999999999999753
No 486
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=333.56 Aligned_cols=200 Identities=30% Similarity=0.489 Sum_probs=166.6
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------A 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i 517 (1343)
.++++|++++|+. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999842 246999999999999999999999999999999999999999999999872 7
Q ss_pred EEEcccc--cccCccHHHHhccCCC---CCHH----HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHH
Q 000702 518 AYVSQSA--WIQSGNIEENILFGSP---MDKA----KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLA 588 (1343)
Q Consensus 518 ~~v~Q~~--~l~~~ti~~Ni~~g~~---~~~~----~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lA 588 (1343)
+|++|+| .+++.|++||+.++.. ++++ ++++.++.+++.+. .......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEEL-----------RDRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCCcccCCHHHHHHHHHH
Confidence 9999997 3678899999987532 3332 23344444444332 2345678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 589 RALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 589 Ral~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
|||+.+|+++||||||++||+.+.+.+++. +..+. .|+|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999998877654 44432 3899999999999985 599999999999999999999865
No 487
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.1e-35 Score=344.82 Aligned_cols=189 Identities=33% Similarity=0.474 Sum_probs=158.4
Q ss_pred CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------------------eEEEEcccc
Q 000702 466 SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------------TAAYVSQSA 524 (1343)
Q Consensus 466 ~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------------~i~~v~Q~~ 524 (1343)
...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++
T Consensus 36 ~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~ 115 (382)
T TIGR03415 36 LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKF 115 (382)
T ss_pred CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCC
Confidence 35689999999999999999999999999999999999999999999986 289999999
Q ss_pred cccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000702 525 WIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDAD 596 (1343)
Q Consensus 525 ~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~ 596 (1343)
.+++ .|++||+.++.. .++ ++..++++..+|.+ .......+|||||||||+|||||+.+|+
T Consensus 116 ~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~-----------~~~~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 116 ALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQ-----------WADKKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred cCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9886 799999998743 222 22333444444432 2334566899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 597 IYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 597 illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|+|||||||+||+.+.+.+.+.+..... .++|+|+|||+++.+. .||+|++|++|++++.|++++++..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999998888765543333 3899999999999864 5999999999999999999998754
No 488
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.2e-35 Score=331.88 Aligned_cols=205 Identities=22% Similarity=0.360 Sum_probs=165.5
Q ss_pred eEEEEeeEEEecCC------CCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC---------
Q 000702 451 AIQIENAEFCWYPS------SSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~------~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------- 515 (1343)
.++++|+++.|+.. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999998532 135799999999999999999999999999999999999999999999876
Q ss_pred -------eEEEEccccc--c-cCccHHHHhccCC----CCCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCC
Q 000702 516 -------TAAYVSQSAW--I-QSGNIEENILFGS----PMDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINL 577 (1343)
Q Consensus 516 -------~i~~v~Q~~~--l-~~~ti~~Ni~~g~----~~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~L 577 (1343)
.++|++|+|. + ...|++||+.++. .++. ++..++++..++.. ...+..+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRS----------EDADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCChhhC
Confidence 2899999973 3 3579999996542 1222 12222333332211 2235677889
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEE
Q 000702 578 SGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRII 654 (1343)
Q Consensus 578 SgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~ 654 (1343)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +..+. .|+|+|++||+++.+. .||++++|++|+++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 230 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILEL-LRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV 230 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE
Confidence 99999999999999999999999999999999997777654 44443 3899999999999987 49999999999999
Q ss_pred EecChHHHHhcC
Q 000702 655 QAGKYDDLLQAG 666 (1343)
Q Consensus 655 ~~g~~~~l~~~~ 666 (1343)
+.|+++++....
T Consensus 231 ~~g~~~~~~~~~ 242 (265)
T TIGR02769 231 EECDVAQLLSFK 242 (265)
T ss_pred EECCHHHHcCCC
Confidence 999999987643
No 489
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.5e-35 Score=340.59 Aligned_cols=206 Identities=23% Similarity=0.407 Sum_probs=168.2
Q ss_pred ceEEEEeeEEEecCCC----------CCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----
Q 000702 450 VAIQIENAEFCWYPSS----------SRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---- 515 (1343)
Q Consensus 450 ~~i~~~~~~f~~~~~~----------~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---- 515 (1343)
..++++|++++|.... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 3689999999885321 24699999999999999999999999999999999999999999999877
Q ss_pred ------------eEEEEccccc--cc-CccHHHHhccCC-----CCCHHH----HHHHHHHhhhhhhHhhccCCCccccC
Q 000702 516 ------------TAAYVSQSAW--IQ-SGNIEENILFGS-----PMDKAK----YKKVIHACSLKKDLELFSHGDQTIIG 571 (1343)
Q Consensus 516 ------------~i~~v~Q~~~--l~-~~ti~~Ni~~g~-----~~~~~~----~~~~~~~~~l~~~~~~l~~g~~t~ig 571 (1343)
.++||+|+|. ++ ..||.|||.++. ..+.++ ..++++..++.. ....
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~----------~~~~ 156 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLP----------NLIN 156 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCh----------HHhc
Confidence 3899999983 54 689999997531 233222 223333333321 1234
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEE
Q 000702 572 DRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVL 648 (1343)
Q Consensus 572 ~~g~~LSgGQkqRi~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l 648 (1343)
.....|||||||||+|||||+.+|+++|+||||++||+.+...+++. ++.+. .|.|+|+|||+++.+.. ||+|++|
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~vl 235 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVLVM 235 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 56778999999999999999999999999999999999998888764 44432 38999999999999875 9999999
Q ss_pred eCCeEEEecChHHHHhcC
Q 000702 649 KEGRIIQAGKYDDLLQAG 666 (1343)
Q Consensus 649 ~~G~i~~~g~~~~l~~~~ 666 (1343)
++|++++.|+.+++.++.
T Consensus 236 ~~G~ive~g~~~~i~~~~ 253 (331)
T PRK15079 236 YLGHAVELGTYDEVYHNP 253 (331)
T ss_pred ECCEEEEEcCHHHHHcCC
Confidence 999999999999988653
No 490
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-35 Score=307.25 Aligned_cols=207 Identities=31% Similarity=0.470 Sum_probs=172.2
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|++..|. ...+|++|||++++||+++++|+||+|||||+++|+|..++.+|+|.++|.
T Consensus 3 mL~v~~l~~~YG---~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYG---KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeeccc---ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 478899998763 367999999999999999999999999999999999999999999999983
Q ss_pred EEEEccccccc-CccHHHHhccCCCCCHH-HHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccC
Q 000702 517 AAYVSQSAWIQ-SGNIEENILFGSPMDKA-KYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQD 594 (1343)
Q Consensus 517 i~~v~Q~~~l~-~~ti~~Ni~~g~~~~~~-~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~ 594 (1343)
++||||.-.+| +.||+||+..|....+. +..+ ..+++-++.+|. +....+.++.+|||||+|-+||||||.++
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 79999998887 57999999988543221 1111 012333445553 34456688999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHhcC-CcEEEEEecCCCc-cccCCEEEEEeCCeEEEecChHHHHhc
Q 000702 595 ADIYLLDDPFSAVDAHTGSELFKEYIMTALA-NKTVIFVTHQVEF-LPAADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 595 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~t~i~vtH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
|++|+||||+.+|-|...++|++.+.....+ |.|+++|.++..+ ++.|||.++|++|+|+.+|+.+|+..+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999998764333323 6799999999987 466999999999999999999999765
No 491
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-35 Score=328.99 Aligned_cols=199 Identities=31% Similarity=0.436 Sum_probs=165.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------A 517 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------i 517 (1343)
.++++|+++.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 378999999884 357999999999999999999999999999999999999999999999873 7
Q ss_pred EEEcccccc-cCccHHHHhccCCC-C--C----HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHH
Q 000702 518 AYVSQSAWI-QSGNIEENILFGSP-M--D----KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLAR 589 (1343)
Q Consensus 518 ~~v~Q~~~l-~~~ti~~Ni~~g~~-~--~----~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lAR 589 (1343)
+|++|++.+ +..|++||+.++.. . + +++.+++++..++.. .......+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHH
Confidence 999999877 67899999988642 1 1 122333344333322 234566789999999999999
Q ss_pred Hhc------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChH
Q 000702 590 ALY------QDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYD 660 (1343)
Q Consensus 590 al~------~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 660 (1343)
|++ .+|+++||||||++||+.+.+.+.+ ++..+. +|+|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999887765 444443 5899999999999886 59999999999999999998
Q ss_pred HHHh
Q 000702 661 DLLQ 664 (1343)
Q Consensus 661 ~l~~ 664 (1343)
++..
T Consensus 227 ~~~~ 230 (258)
T PRK13548 227 EVLT 230 (258)
T ss_pred HHhC
Confidence 8764
No 492
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=3.2e-35 Score=326.35 Aligned_cols=199 Identities=22% Similarity=0.347 Sum_probs=165.1
Q ss_pred EEEEEEEEEEcC----C-CCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCcceEEEc--C--eecCCCCh
Q 000702 1097 IELIDLKVRYGE----N-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIID--N--IDISTIGL 1167 (1343)
Q Consensus 1097 I~f~nvs~~Y~~----~-~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~~~G~I~Id--G--~di~~i~l 1167 (1343)
|+++|++++|+. + ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+| | +++..++.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---H-hhcceeecCCccccCC-chhhhcCCC---CCC----CHHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCC
Q 000702 1168 HD---L-RSRLGIIPQDPNLFEG-TIRCNLDPL---EEH----SDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWS 1235 (1343)
Q Consensus 1168 ~~---L-R~~i~iVpQdp~lF~g-TIr~NLdp~---~~~----sd~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1235 (1343)
.. + +++++|+||+|.+|.. |+++|+... ... .++++.++++..++.+... +. .+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~----~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW------HL----PPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh------hC----CcccCC
Confidence 43 3 4579999999988875 999998531 111 1345677788888754332 11 235799
Q ss_pred hhHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCccccc-ccCEEEEEe
Q 000702 1236 VGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVI-DSDLVLVLS 1305 (1343)
Q Consensus 1236 gGQrQrl~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~ 1305 (1343)
+|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+. -||||+.+.
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~~ 223 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDVT 223 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEecC
Confidence 999999999999999999999999999999999999999998864 3789999999999886 599998763
No 493
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.7e-35 Score=364.11 Aligned_cols=211 Identities=27% Similarity=0.370 Sum_probs=179.4
Q ss_pred EEEEEEEEEEcCCCCcccccceeEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CcceEEEcCeecCCCChHH-Hhhc
Q 000702 1097 IELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEP--ACGRIIIDNIDISTIGLHD-LRSR 1173 (1343)
Q Consensus 1097 I~f~nvs~~Y~~~~~~vL~~is~~I~~GekvgIVGrTGsGKSTLl~~L~rl~~~--~~G~I~IdG~di~~i~l~~-LR~~ 1173 (1343)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3599999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred ceeecCCccccCC-chhhhcCCCCC-------CC----HHHHHHHHHHcCCchHHhcccCCCCcccccCCCCCChhHHHH
Q 000702 1174 LGIIPQDPNLFEG-TIRCNLDPLEE-------HS----DREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQL 1241 (1343)
Q Consensus 1174 i~iVpQdp~lF~g-TIr~NLdp~~~-------~s----d~ei~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQrQr 1241 (1343)
++||||+|.+|.. |+++|+..... .. ++++.++++..++.+.. .+.++ ..||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------VTRPV----GDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------ccCch----hhCCHHHHHH
Confidence 9999999988875 99999864211 11 23466777777764321 12223 4699999999
Q ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCcccccc-cCEEEEEeCCEEeeecChhHHh
Q 000702 1242 VSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEF-KDCTVCTIAHRIPTVID-SDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1242 l~LARALL~~~~ILlLDEaTs~lD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ive~g~p~eLl 1319 (1343)
++|||||+++|+||||||||++||+++...+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998753 46899999999999876 9999999999999999887654
No 494
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=347.42 Aligned_cols=187 Identities=28% Similarity=0.445 Sum_probs=156.6
Q ss_pred CccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC-----------------eEEEEcccccccC-c
Q 000702 468 PTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG-----------------TAAYVSQSAWIQS-G 529 (1343)
Q Consensus 468 ~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-----------------~i~~v~Q~~~l~~-~ 529 (1343)
++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999976 3899999998875 6
Q ss_pred cHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 000702 530 NIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDD 602 (1343)
Q Consensus 530 ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~~~~~illLDe 602 (1343)
|++||+.|+.. ++. ++..++++.++|.+ .......+||||||||++|||||+.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~-----------~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLEN-----------YAHSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh-----------hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998642 222 22333444444432 2334567899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000702 603 PFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQA 665 (1343)
Q Consensus 603 p~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 665 (1343)
||++||+.+.+.+.+.+..... .++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999998887665433222 4899999999999875 5999999999999999999998764
No 495
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=328.91 Aligned_cols=203 Identities=23% Similarity=0.382 Sum_probs=165.3
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG--------------T 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g--------------~ 516 (1343)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478999999984 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcccccccC-ccHHHHhccCCCC----CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHh
Q 000702 517 AAYVSQSAWIQS-GNIEENILFGSPM----DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARAL 591 (1343)
Q Consensus 517 i~~v~Q~~~l~~-~ti~~Ni~~g~~~----~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal 591 (1343)
++|++|++.++. .|++||+.++... +.+..++.+ .+.++.+ |..........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRA-----NELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHH-----HHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 799999998776 5999999876321 221111111 1122222 233345567789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000702 592 YQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLP-AADFILVLKEGRIIQAGKYDDLLQ 664 (1343)
Q Consensus 592 ~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 664 (1343)
+.+|+++||||||++||+.+.+.+.+. +... .+|+|+|++||+++.+. .||++++|++|++++.|+++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRI-IEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999998777654 4443 35899999999998775 599999999999999999988764
No 496
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-35 Score=321.60 Aligned_cols=189 Identities=30% Similarity=0.441 Sum_probs=155.7
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-----------AAYV 520 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-----------i~~v 520 (1343)
|+++|++++|.. +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999842 22 3999999999999999999999999999999999999999999883 7999
Q ss_pred cccccccC-ccHHHHhccCCCC-------CHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHHHHHhc
Q 000702 521 SQSAWIQS-GNIEENILFGSPM-------DKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALY 592 (1343)
Q Consensus 521 ~Q~~~l~~-~ti~~Ni~~g~~~-------~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~lARal~ 592 (1343)
+|++.++. .|++||+.++... ++++..++++.+++.+.. .....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLE-----------KRLPGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHHHHHHHh
Confidence 99999886 4999999876421 122344455555443322 3345689999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc--CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEec
Q 000702 593 QDADIYLLDDPFSAVDAHTGSELFKEYIMTAL--ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAG 657 (1343)
Q Consensus 593 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~--~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g 657 (1343)
.+|+++||||||++||+.+.+.+.+. +..+. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999998877654 44432 38999999999998865 9999999999998754
No 497
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.7e-35 Score=324.75 Aligned_cols=188 Identities=27% Similarity=0.404 Sum_probs=154.6
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT--------------- 516 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~--------------- 516 (1343)
++++|+++.|+. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 368899999842 257999999999999999999999999999999999999999999998762
Q ss_pred -EEEEcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 517 -AAYVSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 517 -i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
++|++|++.++. .|++||+.++.. .+. ++..+.++.+++... ......+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHH
Confidence 799999998876 599999987632 122 223334444444322 234556899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCeE
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGRI 653 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i 653 (1343)
|||++.+|+++||||||++||+++.+.+.+. +..+ .+++|+|++||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNL-LKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999998877654 4443 358999999999998875 999999999974
No 498
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=330.81 Aligned_cols=204 Identities=22% Similarity=0.390 Sum_probs=169.5
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCcc-----CCCcEEEECC----------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIP-----KISGEVRLCG---------- 515 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~-----~~~G~i~~~g---------- 515 (1343)
.++++|++++|. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 10 ~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 589999999984 2479999999999999999999999999999999999976 3799999876
Q ss_pred -----eEEEEcccccccCccHHHHhccCCCC---C---HHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHH
Q 000702 516 -----TAAYVSQSAWIQSGNIEENILFGSPM---D---KAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQR 584 (1343)
Q Consensus 516 -----~i~~v~Q~~~l~~~ti~~Ni~~g~~~---~---~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqR 584 (1343)
.++|++|++.+++.|++||+.++... . +++..++++.+++..++. ...+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 27999999999888999999886431 1 123334445555543332 12456788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCcEEEEEecCCCcccc-CCEEEEEe---------CCeEE
Q 000702 585 VQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPA-ADFILVLK---------EGRII 654 (1343)
Q Consensus 585 i~lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~t~i~vtH~~~~l~~-~d~i~~l~---------~G~i~ 654 (1343)
++||||++.+|+++||||||++||+.+.+.+.+ ++..+.+++|+|++||+++.+.. ||+|++|+ +|+++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999887754 45555557899999999998765 99999998 89999
Q ss_pred EecChHHHHhc
Q 000702 655 QAGKYDDLLQA 665 (1343)
Q Consensus 655 ~~g~~~~l~~~ 665 (1343)
+.|+.+++...
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999998653
No 499
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-35 Score=327.79 Aligned_cols=202 Identities=25% Similarity=0.356 Sum_probs=163.4
Q ss_pred eEEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000702 451 AIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCGT-------------- 516 (1343)
Q Consensus 451 ~i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~-------------- 516 (1343)
.++++|+++.|. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 478999999984 257999999999999999999999999999999999999999999998762
Q ss_pred -----EEEEcccccccC-ccHHHHhccCC----CCCHHHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHH
Q 000702 517 -----AAYVSQSAWIQS-GNIEENILFGS----PMDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQ 586 (1343)
Q Consensus 517 -----i~~v~Q~~~l~~-~ti~~Ni~~g~----~~~~~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~ 586 (1343)
++|++|++.++. .|++|||.++. ........+. ..+.++.+ |....+.....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALAR-----AEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 799999998876 59999997431 1111111110 11112222 3333455667799999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCcEEEEEecCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000702 587 LARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTAL-ANKTVIFVTHQVEFLPA-ADFILVLKEGRIIQAGKYDDLL 663 (1343)
Q Consensus 587 lARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~t~i~vtH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 663 (1343)
||||++.+|+++||||||++||+.+.+.+.+ +++... +|+|+|++||+++.+.. ||++++|++|+++++|+++++.
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 229 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFT 229 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhc
Confidence 9999999999999999999999999887765 454443 58999999999999865 9999999999999999988764
No 500
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.8e-35 Score=324.50 Aligned_cols=187 Identities=24% Similarity=0.407 Sum_probs=154.3
Q ss_pred EEEEeeEEEecCCCCCCccccceeEecCCeEEEEEcCCCCCHHHHHHHHhcCccCCCcEEEECC----------------
Q 000702 452 IQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG---------------- 515 (1343)
Q Consensus 452 i~~~~~~f~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l~g~~~~~~G~i~~~g---------------- 515 (1343)
++++|+++.|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 678999999842 35799999999999999999999999999999999999999999999876
Q ss_pred eEEEEcccccccC-ccHHHHhccCCC---CCH----HHHHHHHHHhhhhhhHhhccCCCccccCCCCCCCChHHHHHHHH
Q 000702 516 TAAYVSQSAWIQS-GNIEENILFGSP---MDK----AKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQL 587 (1343)
Q Consensus 516 ~i~~v~Q~~~l~~-~ti~~Ni~~g~~---~~~----~~~~~~~~~~~l~~~~~~l~~g~~t~ig~~g~~LSgGQkqRi~l 587 (1343)
.++|++|+|.++. .|++||+.++.. .+. ++.++.++..++.+. ......+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHK-----------ADAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHHHH
Confidence 3799999998875 799999987522 221 233444444444322 223456899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-cCCcEEEEEecCCCcccc-CCEEEEEeCCe
Q 000702 588 ARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTA-LANKTVIFVTHQVEFLPA-ADFILVLKEGR 652 (1343)
Q Consensus 588 ARal~~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~t~i~vtH~~~~l~~-~d~i~~l~~G~ 652 (1343)
|||++.+|+++||||||++||+.+...+.+. +... .+++|+|++||+++.+.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999998877654 4443 358999999999998875 99999999985
Done!