Query 000702
Match_columns 1343
No_of_seqs 473 out of 5477
Neff 7.8
Searched_HMMs 29240
Date Tue Mar 26 16:29:47 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000702.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_474-477//hhsearch_pdb/000702hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1650.2 113.6 1249 77-1336 1-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1350.2 103.2 1178 131-1337 44-1274(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 776.2 58.5 515 816-1333 136-653 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 736.5 46.7 516 816-1334 108-626 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 710.2 52.6 550 780-1335 41-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 708.2 57.1 567 762-1335 11-580 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 690.3 54.4 564 764-1333 4-576 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 687.6 62.8 562 764-1334 15-580 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 685.3 66.1 562 764-1334 15-580 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 680.3 61.6 551 783-1336 26-586 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1650.19 Aligned_cols=1249 Identities=19% Similarity=0.220 Sum_probs=938.4
Q ss_pred HHHHHC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH------------CCCCCCCHHHHHHHHH---H-HHHHHH
Q ss_conf 998113-6988889999999438289999999999998570------------1999980479999999---7-899999
Q 000702 77 LLSIGA-KRPLELKDIPLLAPKDRAKTNYKALNSNWEKLKA------------ENPTKTPSLALAILKS---F-WKEAAL 139 (1343)
Q Consensus 77 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~------------~~~~~~~~l~~~l~~~---~-~~~~~~ 139 (1343)
+++-|. +++|+..|.+.+.++|..+...+.+++.|.+... +...++.+ ++.+++. + +..+++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~ 79 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFI 79 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHH
T ss_conf 9877310068763544567950111000011345424355433431001223202568779-999731567678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------C-------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999989999999999970488--------8-------774-----148999999999999999999999999
Q 000702 140 NAVFAGLNTIVSYVGPYLVSYFVDYLGGK--------E-------TFP-----HEGYILAGIFFSAKLVETITTRQWYLG 199 (1343)
Q Consensus 140 ~~~~~~~~~~~~~~~p~ll~~ii~~l~~~--------~-------~~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~ 199 (1343)
+.++.++..+...+.+++++.+++.+.+. . ... .....++..++...+...++.....+.
T Consensus 80 g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~ 159 (1321)
T 4f4c_A 80 GTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTC 159 (1321)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999701000145430003443100168999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999856980000468856789999999999999998-999999899999999999999987999
Q 000702 200 VDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAILYKNVGIAS 278 (1343)
Q Consensus 200 ~~~~~~~~r~~L~~~if~K~l~l~~~~~~~~~~G~iinl~s~D~~~i~~~~~-~~~~l~~~pl~i~~~~~~l~~~~g~~~ 278 (1343)
...++.|+...+|..+|+|+++++..++++.++|+++|++++|+++++++.. .+..++..++.++.++++++...+..+
T Consensus 160 ~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~ 239 (1321)
T 4f4c_A 160 YLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLT 239 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999788989987998489999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999994679999951699999999999999999999999999
Q 000702 279 VATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRWLRKALYSQ 358 (1343)
Q Consensus 279 ~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~i~~IK~~~~e~~~~~~i~~~r~~el~~~~~~~~~~ 358 (1343)
++.++++++++++..++.++..+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++.+..+...+...+.....
T Consensus 240 lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1321)
T 4f4c_A 240 LVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFL 319 (1321)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998399999821429999999999999999999999999
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999987--7889999999999988099767888999999999999999999999999999999999999960664466
Q 000702 359 AFITFIFW--SSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISGFLQEEELQ 436 (1343)
Q Consensus 359 ~~~~~~~~--~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~vs~~Ri~~fl~~~e~~ 436 (1343)
........ .....+.+++++.+.+..+.+++|.+++++.++..+..|+..++..+..+.++.+|++||.++++.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 399 (1321)
T 4f4c_A 320 GISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVI 399 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999959986999999999999999999989999999999999999999997178534
Q ss_pred CCCCC-CCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 21112-45799974219998338982599999930260358419809999938998889999999658657774899879
Q 000702 437 EDATI-VLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKISGEVRLCG 515 (1343)
Q Consensus 437 ~~~~~-~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~g 515 (1343)
+.... ..+.....+.|+++|++|+|+...+.++|+|+||++++|++++|||++|||||||+++|+|+|+|.+|+|.++|
T Consensus 400 ~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG 479 (1321)
T 4f4c_A 400 DSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDG 479 (1321)
T ss_dssp SCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETT
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 56665565677888767999855407999987433331886228827899805898577888875456516448615799
Q ss_pred -------------EEEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf -------------2899826665668658898613999-99889999999960342683502898531378988778189
Q 000702 516 -------------TAAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQ 581 (1343)
Q Consensus 516 -------------~i~yv~Q~~~l~~~ti~~NI~fg~~-~~~~~~~~~~~~~~l~~d~~~l~~g~~t~ige~g~~LSgGQ 581 (1343)
.++||+|+||+|++||||||+||++ .+++++.++++.|++++|++.||+||+|+|||+|.+|||||
T Consensus 480 ~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQ 559 (1321)
T 4f4c_A 480 VDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQ 559 (1321)
T ss_dssp EETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHH
T ss_pred CCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHH
T ss_conf 65011259998504666587533207861678864155220999999998756546887088888607558988777778
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999850699889880888887988899999999978529958999805999624598899993996989049688
Q 000702 582 KQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRIIQAGKYDD 661 (1343)
Q Consensus 582 kqRi~LARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~T~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~ 661 (1343)
||||+||||+|++|+|+||||||||||+++++ ++++++.+.+++||+|+||||++.+..||+|++|++|+|+++|+|+|
T Consensus 560 kQRiaiARAl~~~~~IliLDE~tSaLD~~te~-~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~e 638 (1321)
T 4f4c_A 560 KQRIAIARALVRNPKILLLDEATSALDAESEG-IVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRA 638 (1321)
T ss_dssp HHHHHHHHHHTTCCSEEEEESTTTTSCTTTHH-HHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHH-HHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHH
T ss_conf 79999999872599989984554468878999-99999999847988999736387898689899963996513689999
Q ss_pred HHHCCCCHHHHHHHHHHHHHHC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH-HH-HHHHH
Q ss_conf 9721863799999878765521--79999998876544566865678767889998753100002689635-78-88998
Q 000702 662 LLQAGTDFNALVSAHHEAIEAM--DIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSAS-EQ-KAIKE 737 (1343)
Q Consensus 662 l~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 737 (1343)
|++.++.|.+++..+....... .+.....++.......+.... . ......+............. .. ...++
T Consensus 639 L~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (1321)
T 4f4c_A 639 LMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGL-S----RQASEMDDIMNRVRSSTIGSITNGPVIDE 713 (1321)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHHHCC-----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-C----CCCCCCCCHHHHHHCCCCCCCCCCCCHHH
T ss_conf 998532799999962212222332334433223211122222342-2----22222110221110132124567740257
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CC-CCCCCCH
Q ss_conf 878764343232279888508611898999999830236999999999999999997555442027777-79-9999873
Q 000702 738 KKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQT-EG-DQPKVNP 815 (1343)
Q Consensus 738 ~~~~~~~~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~ 815 (1343)
..............++.++.+...+..|..|......++.+.+.+++.++.........+|++.|.+.. .. .......
T Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1321)
T 4f4c_A 714 KEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQG 793 (1321)
T ss_dssp --CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTH
T ss_pred HHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 77531540389999999970786310999999987789999999999999999999999999999987517934556678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 599999999987999999999999999999999999999999883266532134--670145898831122210320214
Q 000702 816 MVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDS--TPAGRILNRVSIDQSVVDLDIPFR 893 (1343)
Q Consensus 816 ~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~--~p~G~ilnR~s~D~~~id~~l~~~ 893 (1343)
.+|..+|++++++..++.+++.++....+.++++++|.+++++++++|++|||+ +|+|+++|||++|++.+|..++..
T Consensus 794 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~ 873 (1321)
T 4f4c_A 794 HFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFR 873 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999998887349933321678884888850250599999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCC
Q ss_conf 99999999999999988998878999999999999999999999987999999998315599999984115300122470
Q 000702 894 LGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQ 973 (1343)
Q Consensus 894 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~ 973 (1343)
+..++..++.+++.++++++.+|.+.++++++++++++...++.+..+...+......+....++.|++.|+.+||+|++
T Consensus 874 l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 953 (1321)
T 4f4c_A 874 FSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAR 953 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999986537777022137868999999998889999999999999999999999988898899999962798886141
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCC--CCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999985424699999999999999999999999999999-9870599--87887999999999999999999
Q 000702 974 EKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHG--AIDPSMAGLAVTYGLNLNARLSR 1050 (1343)
Q Consensus 974 ~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~~-~~~~~~g--~~~~~~~gl~l~~~~~~~~~l~~ 1050 (1343)
++.+.+++.+..+...+..+.......+.......+..+...++..+ ......+ .++++.+...+.+......++.+
T Consensus 954 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1033 (1321)
T 4f4c_A 954 EDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGF 1033 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 48899999999999999999999999999999999999999999987578875376542147899999999877889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEECCCCEEEE
Q ss_conf 99999999987666999998634999999988889999999998608998899997689-98410010168429979999
Q 000702 1051 WILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGI 1129 (1343)
Q Consensus 1051 ~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~~-~~~vL~~isf~I~~GekvgI 1129 (1343)
+...+.+++..+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.+ ..+||+|+||+|+|||+|||
T Consensus 1034 ~~~~~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaI 1110 (1321)
T 4f4c_A 1034 ATSYFPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLAL 1110 (1321)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 99999999999999998999860766577---766778788888818999879857999988212451699889899999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHH
Q ss_conf 959999888999998312479863699927306999967885205065577643677544306989---98999999999
Q 000702 1130 VGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL---EEHSDREIWEA 1206 (1343)
Q Consensus 1130 VGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~---~~~sd~ei~~a 1206 (1343)
|||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||..+ ++++|+|+|+|
T Consensus 1111 VG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~A 1190 (1321)
T 4f4c_A 1111 VGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEA 1190 (1321)
T ss_dssp ECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 89999819999999956863899789999998654999999854599878997327239999745499999999999999
Q ss_pred HHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99859934783014887742334998889138899999999834998799837887999898999999999736993799
Q 000702 1207 LDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVC 1286 (1343)
Q Consensus 1207 L~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI 1286 (1343)
|+.++++++|.++|+||||.|+|+|.|||||||||||||||+||+|+|||||||||+||++||+.||++|++.+++||+|
T Consensus 1191 l~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI 1270 (1321)
T 4f4c_A 1191 ARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCI 1270 (1321)
T ss_dssp HHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEE
T ss_pred HHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99829849997176789998238891569999999999999971799899968111578999999999999973999899
Q ss_pred EECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHCCC
Q ss_conf 86048310013578999959879662492577505992799999984115
Q 000702 1287 TIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSSR 1336 (1343)
Q Consensus 1287 ~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~~~~~ 1336 (1343)
+||||++|+.+||||+|||+|+|+|+|+|+||+++ +|.|++|++.+..+
T Consensus 1271 ~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1271 VIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQMTE 1319 (1321)
T ss_dssp EECSSSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C-------------
T ss_pred EECCCHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 96068999996999999989899998888999849-80999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1350.16 Aligned_cols=1178 Identities=19% Similarity=0.212 Sum_probs=875.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------CC------------CHHHHHHHHHHHHHHHHHHH
Q ss_conf 997899999999999999999899999999999704888-------77------------41489999999999999999
Q 000702 131 KSFWKEAALNAVFAGLNTIVSYVGPYLVSYFVDYLGGKE-------TF------------PHEGYILAGIFFSAKLVETI 191 (1343)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~p~ll~~ii~~l~~~~-------~~------------~~~~~~~~~~l~~~~~~~~~ 191 (1343)
+.+|..++++.++.++..++..+.|++++.+++.+.... .. ......++..++...++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999856980000468856789999999999999998-9999998999999999999
Q 000702 192 TTRQWYLGVDILGMHVRSALTAMVYRKGLKLSSLAKQSHTSGEIVNYMAVDVQRVGDYSW-YLHDIWMLPLQIILALAIL 270 (1343)
Q Consensus 192 ~~~~~~~~~~~~~~~~r~~L~~~if~K~l~l~~~~~~~~~~G~iinl~s~D~~~i~~~~~-~~~~l~~~pl~i~~~~~~l 270 (1343)
+.....+...+.+.++...++..+|+|.++++..++++.++|+++|++++|++.+.+... .+..+...++.++.+++++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99987999999999999999999999999999999999999999999999946799999516999999999999999999
Q 000702 271 YKNVGIASVATLIATIISIVVTVPVAKVQEEYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFRW 350 (1343)
Q Consensus 271 ~~~~g~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~i~~IK~~~~e~~~~~~i~~~r~~el~~ 350 (1343)
+......+++.++++++++.+..++.+...+..++.++..++......|.++|+++||.|++|+.+.+++.+..+...+.
T Consensus 204 ~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 204 FTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp HHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999--8778899999999999880997678889999999999999999999999999999999999999
Q 000702 351 LRKALYSQAFITFI--FWSSPIFVAAVTFGTSILLGAQLTAGSVLSAMATFRILQEPLRNFPDLVSMMAQTKVSLDRISG 428 (1343)
Q Consensus 351 ~~~~~~~~~~~~~~--~~~~~~~~~~~~f~~~~~~~~~lt~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~vs~~Ri~~ 428 (1343)
..+........... +......+.+++++.+.+..+.+++|.+++++.++.....|+..+...+..+..+..+.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCC-CCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf 6066446621-112457999742199983389825999999302603584198099999389988899999996586577
Q 000702 429 FLQEEELQED-ATIVLPRGMTNVAIQIENAEFCWYPSSSRPTLSGISMKVDRGMRVAVCGMVGSGKSSLLSCILGEIPKI 507 (1343)
Q Consensus 429 fl~~~e~~~~-~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~l~~i~l~i~~g~~~~ivG~~GsGKStll~~llg~~~~~ 507 (1343)
+++.++..+. .....+.....+.|+++|++|+|+.+.+.++|+|+||++++|++++|+|+||||||||+++|+|+++|+
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~ 443 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPL 443 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCS
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 97289867766656777777777189999899769999871012545897599889998999997999999980788999
Q ss_pred CCEEEECCE-------------EEEECCCCCCCCCCHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 748998792-------------899826665668658898613999-998899999999603426835028985313789
Q 000702 508 SGEVRLCGT-------------AAYVSQSAWIQSGNIEENILFGSP-MDKAKYKKVIHACSLKKDLELFSHGDQTIIGDR 573 (1343)
Q Consensus 508 ~G~i~~~g~-------------i~yv~Q~~~l~~~ti~~NI~fg~~-~~~~~~~~~~~~~~l~~d~~~l~~g~~t~ige~ 573 (1343)
+|+|.++|. ++||+|+||+|++||+|||.+|.+ .++++++++++.|++.+++..+|+|++|.+||+
T Consensus 444 ~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 523 (1284)
T 3g5u_A 444 DGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGER 523 (1284)
T ss_dssp EEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSS
T ss_pred CEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
T ss_conf 73899999987757999998654898688753776699997457989999999999998296999974656334501478
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEE
Q ss_conf 88778189999999998506998898808888879888999999999785299589998059996245988999939969
Q 000702 574 GINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFKEYIMTALANKTVIFVTHQVEFLPAADFILVLKEGRI 653 (1343)
Q Consensus 574 g~~LSgGQkqRi~LARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~T~ilvth~~~~l~~~d~i~~l~~G~i 653 (1343)
|.+|||||||||+||||++++|+|+|||||||+||+++++.+. +++....+++|+|+|||+++.+..||+|++|++|++
T Consensus 524 g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~-~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i 602 (1284)
T 3g5u_A 524 GAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQ-AALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVI 602 (1284)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHH-HHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH-HHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 7865999999999999995299989997987777999999999-999997399989999407789974998999989999
Q ss_pred EEECCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 89049688972186379999987876552179999998876544566865678767889998753100002689635788
Q 000702 654 IQAGKYDDLLQAGTDFNALVSAHHEAIEAMDIPNHSSEDSDENLTLDGCVIPCKKCDASGDNIDNLAKEVQDGSSASEQK 733 (1343)
Q Consensus 654 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1343)
++.|+|+++++.++.|.+++..+....+........ ...... +.. . .............. ....
T Consensus 603 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~---~---~~~~~~~~~~~~~~------~~~~ 666 (1284)
T 3g5u_A 603 VEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEAC--KSKDEI--DNL---D---MSSKDSGSSLIRRR------STRK 666 (1284)
T ss_dssp CCEECHHHHHHTTSHHHHHHHHTC--------------------------------------------------------
T ss_pred EEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCC--CCCCCC--CCC---C---CCCCCCCCCCCCCC------CCCC
T ss_conf 997889999867877999999743002211133333--322222--344---3---33333332000345------4333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHCCCCCC
Q ss_conf 8998878764343232279888--50861189899999983023699999999999999999755----54420277777
Q 000702 734 AIKEKKKAKRSRKKQLVQEEER--VRGRVSMKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASN----WWMAWANPQTE 807 (1343)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~~e~~--~~g~v~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~ 807 (1343)
.... ..........++.. ......+..++.|.+.....+.+. +++.++..++....+ .|+..+.....
T Consensus 667 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 740 (1284)
T 3g5u_A 667 SICG----PHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVG--IFCAIINGGLQPAFSVIFSKVVGVFTNGGP 740 (1284)
T ss_dssp ---------------------CCCCCSCCCTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCCC----CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 4456----4223321102455531366258999999845157999999--999999999999999999999999855685
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHH
Q ss_conf 9999987359999999998799999999999999999999999999999988326653213--46701458988311222
Q 000702 808 GDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFD--STPAGRILNRVSIDQSV 885 (1343)
Q Consensus 808 ~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~--~~p~G~ilnR~s~D~~~ 885 (1343)
..........+..+|++++++..++.+++.++....+.+...++|.+++++++++|++||| .+|+|++++|+++|+..
T Consensus 741 ~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~ 820 (1284)
T 3g5u_A 741 PETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQ 820 (1284)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 03367799999999999999999999999999999999999999999999998399888757899889999999999999
Q ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
Q ss_conf 10320214999999999999999889988789999999999999999999999879999999983155999999841153
Q 000702 886 VDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGA 965 (1343)
Q Consensus 886 id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~ 965 (1343)
++..++..+..++..++.+++.+++++.++|.+.++++.++++.+.+...+.+..+...+......+....++.|++.|+
T Consensus 821 i~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi 900 (1284)
T 3g5u_A 821 VKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENF 900 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999699999999999999999999999999999999999999999999999889
Q ss_pred HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-HHHHCCCCCCHHHHHHHHHHH
Q ss_conf 001224708999999999998542469999999999999999999999999999---9-987059987887999999999
Q 000702 966 STIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV---L-LVSFPHGAIDPSMAGLAVTYG 1041 (1343)
Q Consensus 966 ~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~---~-~~~~~~g~~~~~~~gl~l~~~ 1041 (1343)
.+||+|++++.+.+++....+...+..... ..|.+....+...+.....++ + ...+..+.++.+.+..++.+.
T Consensus 901 ~ti~a~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~ 977 (1284)
T 3g5u_A 901 RTVVSLTREQKFETMYAQSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAI 977 (1284)
T ss_dssp TTTTTCSSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 999984659999999999999999999999---99999999999999999999999999999990980699999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEE
Q ss_conf 99999999999999999987666999998634999999988889999999998608998899997689-98410010168
Q 000702 1042 LNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGEN-LPLVLHGITCA 1120 (1343)
Q Consensus 1042 ~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~~-~~~vL~~isf~ 1120 (1343)
.....++..+...+..+.....+++|+.++.+.+++.+.... .+...++..|.|+|+||+|+|+.. ..++|+|+||+
T Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~ 1055 (1284)
T 3g5u_A 978 VFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYST--QGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLE 1055 (1284)
T ss_dssp HHHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCS--SCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEE
T ss_conf 999999999999999999999999999999838876666555--665456777857999989977999987002030599
Q ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC---CC
Q ss_conf 429979999959999888999998312479863699927306999967885205065577643677544306989---98
Q 000702 1121 FPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL---EE 1197 (1343)
Q Consensus 1121 I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~---~~ 1197 (1343)
|++||++||||+||||||||+++|+|+++|++|+|.+||+|++.++++.+|+++++|||||.+|++|||+|+.++ ..
T Consensus 1056 i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~ 1135 (1284)
T 3g5u_A 1056 VKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRV 1135 (1284)
T ss_dssp ECSSSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCC
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 76998899988999978999999946867899779899998000789999702689877874066669999746687789
Q ss_pred CCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999999859934783014887742334998889138899999999834998799837887999898999999999
Q 000702 1198 HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIR 1277 (1343)
Q Consensus 1198 ~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~ 1277 (1343)
.++++++++++.+++++++.++|+||||.++|+|.+||||||||+|||||++++|+|||||||||++|.++++.|++.|+
T Consensus 1136 ~~~~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~ 1215 (1284)
T 3g5u_A 1136 VSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALD 1215 (1284)
T ss_dssp CCHHHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 99999999999839599997270424561178889338999999999999974999999868755579999999999999
Q ss_pred HHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHCCCC
Q ss_conf 736993799860483100135789999598796624925775059927999999841157
Q 000702 1278 TEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSSRS 1337 (1343)
Q Consensus 1278 ~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~~~~~~ 1337 (1343)
+..+++|+|+||||++++.+||||+||++|+++|.|+|++|+++ +|.|++|++.+....
T Consensus 1216 ~~~~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~~~ 1274 (1284)
T 3g5u_A 1216 KAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAGAK 1274 (1284)
T ss_dssp HHSSSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC---
T ss_pred HHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHCC
T ss_conf 86799989999558799980998999989989997789999847-777999999976132
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=776.19 Aligned_cols=515 Identities=19% Similarity=0.248 Sum_probs=454.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 59999999998799999999999999999999999999999988326653213467014589883112221032021499
Q 000702 816 MVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLG 895 (1343)
Q Consensus 816 ~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~ 895 (1343)
..+.+.|++++++..++.+++.+++.+.+.+...++|.++++++++.|++|||++++|++++|+++|++.++..+...+.
T Consensus 136 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 136 MNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999788989987998489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHH
Q ss_conf 99999999999998899887899999999999999999999998799999999831559999998411530012247089
Q 000702 896 GFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEK 975 (1343)
Q Consensus 896 ~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~ 975 (1343)
.++...+.+++.++++++.+|.+.++++..++++..+..++.+..+...+......+...+++.|+++|+.+||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999985424699999999999999999999999999999-9870599878879999999999999999999999
Q 000702 976 RFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILS 1054 (1343)
Q Consensus 976 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~ 1054 (1343)
.+.+++.+..+...+..........+......++..+...++..+ ...+..|.+++|.+..++.+...+..++..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC-CCCCCCCCCEEEECCCCEEEEECCC
Q ss_conf 999998766699999863499999998888999999999860899889999768-9984100101684299799999599
Q 000702 1055 FCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGE-NLPLVLHGITCAFPGGKKIGIVGRT 1133 (1343)
Q Consensus 1055 ~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~-~~~~vL~~isf~I~~GekvgIVGrT 1133 (1343)
+..+.....+.+|+.++.+.+++.+... .......+..|.|+|+||+|+|+. ...++|+|+||+|+|||++||||+|
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 9999999999999999971785345666--55656778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCC
Q ss_conf 998889999983124798636999273069999678852050655776436775443069899-8999999999998599
Q 000702 1134 GSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQL 1212 (1343)
Q Consensus 1134 GsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L 1212 (1343)
|||||||+++|+|+|+|++|+|.+||+|++++++++||++|+||||+|.||+||||+||..+. +.+|+++++|++.+++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 34783014887742334998889138899999999834998799837887999898999999999736993799860483
Q 000702 1213 GDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRI 1292 (1343)
Q Consensus 1213 ~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl 1292 (1343)
+++++.+|+|+||.|+|+|.+||||||||+|||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred CCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 10013578999959879662492577505992799999984
Q 000702 1293 PTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1293 ~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~~ 1333 (1343)
+++.+||+|+||++|+|+|.|+|+||++ .+|.|++|++.+
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~-~~g~y~~l~~~q 653 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMA-QQGLYYDLVTAQ 653 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHT-TTCHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHH-HHHHHHHHHHHH
T ss_conf 7898689899963996513689999998-532799999962
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=736.49 Aligned_cols=516 Identities=20% Similarity=0.264 Sum_probs=446.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf 59999999998799999999999999999999999999999988326653213467014589883112221032021499
Q 000702 816 MVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLG 895 (1343)
Q Consensus 816 ~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~ 895 (1343)
..+..+|++++++..++.+++.++....+.+...++|.+++++++++|++|||++++|++++|+++|++.++..++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHH
Q ss_conf 99999999999998899887899999999999999999999998799999999831559999998411530012247089
Q 000702 896 GFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEK 975 (1343)
Q Consensus 896 ~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~ 975 (1343)
.++..++.+++.++++++.+|.+.+++++++++++.+..++.+..++..+......++..+++.|++.|+.+||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999985424699999999999999999999999999999-9870599878879999999999999999999999
Q 000702 976 RFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILS 1054 (1343)
Q Consensus 976 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~ 1054 (1343)
.+.+++.+..+...+..........+......++..+...++..+ ......|.+++|.+..++.+......++..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPN 347 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999929988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCCCCCEEEECCCCEEEEECCC
Q ss_conf 9999987666999998634999999988889999999998608998899997689-984100101684299799999599
Q 000702 1055 FCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRT 1133 (1343)
Q Consensus 1055 ~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~~-~~~vL~~isf~I~~GekvgIVGrT 1133 (1343)
+..+.....+++|+.++.+.+++.+...+...++ .+..|.|+|+||+|+|+.+ ..++|+|+||+|++||++||||+|
T Consensus 348 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~s 425 (1284)
T 3g5u_A 348 IEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNS 425 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCC
T ss_conf 9999999999999999972898677666567777--77777189999899769999871012545897599889998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCC
Q ss_conf 99888999998312479863699927306999967885205065577643677544306989-98999999999998599
Q 000702 1134 GSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQL 1212 (1343)
Q Consensus 1134 GsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L 1212 (1343)
|||||||+++|+|+++|++|+|.+||+|++.++++++|++|++|||||.+|++|||+|+..+ ++.++++++++++.+++
T Consensus 426 GsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~ 505 (1284)
T 3g5u_A 426 GCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANA 505 (1284)
T ss_dssp SSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 99799999998078899973899999987757999998654898688753776699997457989999999999998296
Q ss_pred CHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 34783014887742334998889138899999999834998799837887999898999999999736993799860483
Q 000702 1213 GDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRI 1292 (1343)
Q Consensus 1213 ~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl 1292 (1343)
++++..+|+|+||.++|+|.+||||||||+|||||++++|+|||||||||+||++|++.|++.++...+++|+|+||||+
T Consensus 506 ~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l 585 (1284)
T 3g5u_A 506 YDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRL 585 (1284)
T ss_dssp HHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99997465633450147878659999999999999952999899979877779999999999999973999899994077
Q ss_pred CCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHC
Q ss_conf 100135789999598796624925775059927999999841
Q 000702 1293 PTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1293 ~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~~~ 1334 (1343)
+++.+||+|+||++|+++|.|+|++|+++ ++.|++++..+.
T Consensus 586 ~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 626 (1284)
T 3g5u_A 586 STVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQT 626 (1284)
T ss_dssp HHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHTC
T ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHH
T ss_conf 89974998999989999997889999867-877999999743
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=710.23 Aligned_cols=550 Identities=24% Similarity=0.322 Sum_probs=476.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999755544202777779999987359999999998799999999999999999999999999999988
Q 000702 780 LIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~i 859 (1343)
+.+++.++..++.+..++++++..+.............++.+++++.++..++.+++.++....+.+...++|.++++++
T Consensus 41 ~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 120 (598)
T 3qf4_B 41 MVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKL 120 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999973688899999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32665321346701458988311222103202149999999999999998899887899999999999999999999998
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMAS 939 (1343)
Q Consensus 860 l~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 939 (1343)
++.|+.||++++.|++++|+++|++.++..+...+..++...+.+++.+++++.++|++.++.+.++++++.+..++.+.
T Consensus 121 l~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~ 200 (598)
T 3qf4_B 121 QRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQ 200 (598)
T ss_dssp HHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77999997688889999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999983155999999841153001224708999999999998542469999999999999999999999999999
Q 000702 940 SRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV 1019 (1343)
Q Consensus 940 ~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~ 1019 (1343)
.++..+......+.+.+++.|++.|+.+||+|++++.+.+++.+..+...+..........+......++..+...++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (598)
T 3qf4_B 201 TRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISG 280 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997379999974870999999999999999999999999999999999999999999999
Q ss_pred -HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf -9987059987887999999999999999999999999999876669999986349999999888899999999986089
Q 000702 1020 -LLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGTIE 1098 (1343)
Q Consensus 1020 -~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~I~ 1098 (1343)
.......|.+++|.+..++.|...+..++..+...+..++..+.+++|+.++.+.++|.+. ..+...++..|.|+
T Consensus 281 ~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~----~~~~~~~~~~~~i~ 356 (598)
T 3qf4_B 281 FGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD----PDAVELREVRGEIE 356 (598)
T ss_dssp HHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC----SSCCCCCSCCCCEE
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCCCCEEE
T ss_conf 99999985997899999999999999999999999999999999999999999768877777----77777777777189
Q ss_pred EEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEEEC
Q ss_conf 98899997689984100101684299799999599998889999983124798636999273069999678852050655
Q 000702 1099 LIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGIIP 1178 (1343)
Q Consensus 1099 f~nvs~~Y~~~~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~iIp 1178 (1343)
++||+|+|+++ .++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+.+|++++++|
T Consensus 357 ~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~~~~~~~~r~~i~~v~ 435 (598)
T 3qf4_B 357 FKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVL 435 (598)
T ss_dssp EEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEEC
T ss_pred EEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHCEEEEE
T ss_conf 99989977999-86012227998699889998999996999999994585799808999999830188999984108990
Q ss_pred CCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 776436775443069899-8999999999998599347830148877423349988891388999999998349987998
Q 000702 1179 QDPNLFEGTIRCNLDPLE-EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQARILVL 1257 (1343)
Q Consensus 1179 Qdp~LF~gTIr~NLdp~~-~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~~ILiL 1257 (1343)
|+|.+|++|+++|+..+. ..++++++++++.++++++++.+|+|+|+.++|+|.+||||||||+|||||++++|+||+|
T Consensus 436 Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv~iAral~~~p~illl 515 (598)
T 3qf4_B 436 QDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILIL 515 (598)
T ss_dssp TTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 79823246399997447999999999999999697888974645323642278898799999999999999649999999
Q ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHCC
Q ss_conf 378879998989999999997369937998604831001357899995987966249257750599279999998411
Q 000702 1258 DEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1258 DEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~~~~ 1335 (1343)
|||||++|+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++++..+..
T Consensus 516 DEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 516 DEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQK-RGFYYELFTSQYG 592 (598)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHHT-TCHHHHHHHHHHG
T ss_pred ECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHH
T ss_conf 8976679999999999999998089989999427789971998999989999987789999867-8779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=708.22 Aligned_cols=567 Identities=21% Similarity=0.273 Sum_probs=467.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89899999983023699999999999999999755544202777779999987-35999999999879999999999999
Q 000702 762 MKVYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVN-PMVLLVVYMALAFGSSWFIFVRAVLV 840 (1343)
Q Consensus 762 ~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~l~~y~~l~~~~~~~~~~~~~~~ 840 (1343)
++.++.|++...+. ..+.+++.++..++.+..+++++++.+..... .+.. ...+..+++++.++..++.+++.++.
T Consensus 11 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 11 SKTLARYLKPYWIF--AVLAPLFMVVEVICDLSQPTLLARIVDEGIAR-GDFSLVLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCGGGGTGGGHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999--99999999999999999999999999998736-9879999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999883266532134670145898831122210320214999999999999999889988789999
Q 000702 841 ATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLL 920 (1343)
Q Consensus 841 ~~~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 920 (1343)
...+.+...++|.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|.+.+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889799765888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999987999999998315599999984115300122470899999999999854246999999999
Q 000702 921 LVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIE 1000 (1343)
Q Consensus 921 ~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 1000 (1343)
+++..+++++.+..++.+..++..+......+.+.+++.|++.|+.+||+|++++.+.+++.+..+...+..........
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999999999999999999-9998705998788799999999999999999999999999987666999998634999999
Q 000702 1001 WLCLRMELLSTFVFAFCM-VLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAP 1079 (1343)
Q Consensus 1001 wl~~~~~~i~~~~~~~~~-~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~ 1079 (1343)
+......++..+...++. +.......|.+++|.+..++.|...+..++..+...+..+.....+.+|+.++.+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 98888999999999860899889999768998410010168429979999959999888999998312479863699927
Q 000702 1080 PVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDN 1159 (1343)
Q Consensus 1080 ~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~~~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG 1159 (1343)
.. ..+...++..+.|+++||+|+|+++.+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||
T Consensus 328 ~~---~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g 404 (587)
T 3qf4_A 328 EA---DNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDE 404 (587)
T ss_dssp CC---TTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESS
T ss_pred CC---CCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 88---776566888880799788998489997642111799869988999899999799999999278669986798999
Q ss_pred EECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 306999967885205065577643677544306989-9899999999999859934783014887742334998889138
Q 000702 1160 IDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQ 1238 (1343)
Q Consensus 1160 ~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQ 1238 (1343)
+|+++++.+++|++++++||+|.+|++|+|+|+..+ +..++++++++++.+++.+++..+|+|+|+.++++|.+|||||
T Consensus 405 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGq 484 (587)
T 3qf4_A 405 LDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQ 484 (587)
T ss_dssp SBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHH
T ss_pred EECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHH
T ss_conf 98340789999841389778986767559999852488999999999999968499997565312127518989929999
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHH
Q ss_conf 89999999983499879983788799989899999999973699379986048310013578999959879662492577
Q 000702 1239 RQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRL 1318 (1343)
Q Consensus 1239 rQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~L 1318 (1343)
|||+|||||++++|+||+||||||++|+++++.|++.|++..+++|+|+||||++++..||||++|++|+++|.|+|+||
T Consensus 485 rQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 485 KQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997299999997975447999999999999986799989998227688981998999989989997889999
Q ss_pred HHCCCCHHHHHHHHHCC
Q ss_conf 50599279999998411
Q 000702 1319 LEDKSSMFLKLVTEYSS 1335 (1343)
Q Consensus 1319 l~~~~~~f~~l~~~~~~ 1335 (1343)
+++ ++.|+++++.+..
T Consensus 565 ~~~-~~~~~~~~~~~~~ 580 (587)
T 3qf4_A 565 LEH-CKPYREIYESQFG 580 (587)
T ss_dssp HHH-CHHHHHHHHHHC-
T ss_pred HHC-CCHHHHHHHHHHC
T ss_conf 867-8399999999846
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=690.26 Aligned_cols=564 Identities=20% Similarity=0.255 Sum_probs=461.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC--CC-H----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999830236999999999999999997555442027777799999--87-3----599999999987999999999
Q 000702 764 VYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPK--VN-P----MVLLVVYMALAFGSSWFIFVR 836 (1343)
Q Consensus 764 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-~----~~~l~~y~~l~~~~~~~~~~~ 836 (1343)
.++.|++...+.+. +.+++.++..++.+..++.+++..+........ .. . ..+..++.++.++..++.+++
T Consensus 4 ~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 4 RYLQFVKPYKYRIF--ATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHGGGHHHHH--HHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999889999999--9999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999988326653213467014589883112221032021499999999999999988998878
Q 000702 837 AVLVATFGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTW 916 (1343)
Q Consensus 837 ~~~~~~~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~ 916 (1343)
.++....+.+...+++.++++++++.|+.||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976898699999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998799999999831559999998411530012247089999999999985424699999
Q 000702 917 QVLLLVIPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSL 996 (1343)
Q Consensus 917 ~~~~~~i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~ 996 (1343)
++.++.+..+++++.+..++.+..++..+......+...+++.|++.|+.+||+|++++.+.+++.+..+...+......
T Consensus 162 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (578)
T 4a82_A 162 KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHT 241 (578)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999982499999816649999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999999-9999870599878879999999999999999999999999998766699999863499
Q 000702 997 AAIEWLCLRMELLSTFVFAFC-MVLLVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIP 1075 (1343)
Q Consensus 997 ~~~~wl~~~~~~i~~~~~~~~-~~~~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~ 1075 (1343)
....+.......+..+...++ .+.......|.+++|.+..++.|...+..++..+...+..+.....+.+|+.++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 321 (578)
T 4a82_A 242 RWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDED 321 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859958999999999999999999999999999999999999999997689
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99999888899999999986089988999976899841001016842997999995999988899999831247986369
Q 000702 1076 GEAPPVIEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRI 1155 (1343)
Q Consensus 1076 ~e~~~~~~~~~~~~~~p~~g~I~f~nvs~~Y~~~~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I 1155 (1343)
++.+. ...+.+.++..+.|+++||+++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|
T Consensus 322 ~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 322 YDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 76667---877666677788079999999758999741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 9927306999967885205065577643677544306989-989999999999985993478301488774233499888
Q 000702 1156 IIDNIDISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPL-EEHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNW 1234 (1343)
Q Consensus 1156 ~IdG~di~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~-~~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nL 1234 (1343)
.+||.|+++++.+++|++++++||+|.+|++|+++|+..+ +..++++++++++.+++.+++..+|+|+||.++|+|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECC
Q ss_conf 91388999999998349987998378879998989999999997369937998604831001357899995987966249
Q 000702 1235 SVGQRQLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDT 1314 (1343)
Q Consensus 1235 S~GQrQrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~ 1314 (1343)
|||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||||++|++|+++|.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHHCCCCHHHHHHHHH
Q ss_conf 2577505992799999984
Q 000702 1315 PGRLLEDKSSMFLKLVTEY 1333 (1343)
Q Consensus 1315 p~~Ll~~~~~~f~~l~~~~ 1333 (1343)
|+||+++ ++.|+++++.+
T Consensus 559 ~~el~~~-~~~~~~~~~~q 576 (578)
T 4a82_A 559 HRELIAK-QGAYEHLYSIQ 576 (578)
T ss_dssp HHHHHHT-TSHHHHHHTTT
T ss_pred HHHHHHC-CCHHHHHHHHH
T ss_conf 9999858-83899999850
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=687.60 Aligned_cols=562 Identities=20% Similarity=0.263 Sum_probs=478.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999998302369999999999999999975554420277777999998735999-99999987999999999999999
Q 000702 764 VYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLL-VVYMALAFGSSWFIFVRAVLVAT 842 (1343)
Q Consensus 764 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-~~y~~l~~~~~~~~~~~~~~~~~ 842 (1343)
.++.|++...+.. .+.+++.++..++.+..+++++++.+..... .......++ .+++++.++..++.+++.+....
T Consensus 15 ~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (582)
T 3b60_A 15 RLWPTIAPFKAGL--IVAGIALILNAASDTFMLSLLKPLLDDGFGK-TDRSVLLWMPLVVIGLMILRGITSYISSYCISW 91 (582)
T ss_dssp HHHHHHGGGHHHH--HHHHHHHHHHHHHHHHHHHHHTHHHHSSTTS-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--9999999999999999999999999988436-865799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988326653213467014589883112221032021499999999999999988998878999999
Q 000702 843 FGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLV 922 (1343)
Q Consensus 843 ~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 922 (1343)
.+.+...+++.++++++++.|+.||++++.|++++|+++|++.++..+...+..++...+.+++.+++++.++|++.+++
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 171 (582)
T 3b60_A 92 VSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIIL 171 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999809999978898658999999879999999999999999999999999999999809999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998799999999831559999998411530012247089999999999985424699999999999
Q 000702 923 IPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWL 1002 (1343)
Q Consensus 923 i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1002 (1343)
+..+++++.+..++.+..++..+......+.+.+++.|++.|+.+||+|+.++.+.+++.+..+...+..........|.
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b60_A 172 VVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSIS 251 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999996199999837689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999-9870599878879999999999999999999999999998766699999863499999998
Q 000702 1003 CLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPV 1081 (1343)
Q Consensus 1003 ~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~ 1081 (1343)
.....++..+...++..+ ......|.+++|.+..++.++..+..++..+...+..+.....+++|+.++.+.+++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~- 330 (582)
T 3b60_A 252 DPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE- 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999999999999984999899999999999999999999999999999999999999999759987667-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 88899999999986089988999976899841001016842997999995999988899999831247986369992730
Q 000702 1082 IEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNID 1161 (1343)
Q Consensus 1082 ~~~~~~~~~~p~~g~I~f~nvs~~Y~~~~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~d 1161 (1343)
. +.+.++..+.|+++||+++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.|
T Consensus 331 --~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~ 406 (582)
T 3b60_A 331 --G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHD 406 (582)
T ss_dssp --C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEE
T ss_pred --C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEE
T ss_conf --7--777778888479998899739999744156159976999899989999989999999861068989769799998
Q ss_pred CCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 69999678852050655776436775443069899--8999999999998599347830148877423349988891388
Q 000702 1162 ISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE--EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1162 i~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQr 1239 (1343)
+++++.+.+|++++++||+|.+|++|+++|+..+. +.++++++++++.++++++++++|+|||+.++|+|.+||||||
T Consensus 407 ~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~ 486 (582)
T 3b60_A 407 LREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQR 486 (582)
T ss_dssp TTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHH
T ss_pred CCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 23069999996080880687477878999985459999899999999998497999984504114511479887899999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999999834998799837887999898999999999736993799860483100135789999598796624925775
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1240 Qrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll 1319 (1343)
||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|+
T Consensus 487 qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 566 (582)
T 3b60_A 487 QRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELL 566 (582)
T ss_dssp HHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999972899899978655579899999999999996799799994547789859989999788898845899998
Q ss_pred HCCCCHHHHHHHHHC
Q ss_conf 059927999999841
Q 000702 1320 EDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1320 ~~~~~~f~~l~~~~~ 1334 (1343)
++ ++.|+++++.+.
T Consensus 567 ~~-~~~~~~~~~~q~ 580 (582)
T 3b60_A 567 AQ-HGVYAQLHKMQF 580 (582)
T ss_dssp HH-TSSHHHHHHHTC
T ss_pred HC-CCHHHHHHHHHC
T ss_conf 76-988999999750
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=685.35 Aligned_cols=562 Identities=21% Similarity=0.306 Sum_probs=477.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999998302369999999999999999975554420277777999998735999-99999987999999999999999
Q 000702 764 VYLSYMAAAYRGLLIPLIILAQVLFQFLQIASNWWMAWANPQTEGDQPKVNPMVLL-VVYMALAFGSSWFIFVRAVLVAT 842 (1343)
Q Consensus 764 ~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l-~~y~~l~~~~~~~~~~~~~~~~~ 842 (1343)
.++.|++...+.. .+.+++.++..++.+..+++++++.+..... .......++ .+++++.++..++.+++.++...
T Consensus 15 ~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (582)
T 3b5x_A 15 RLWTYIRLYKAGL--VVSTIALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPFMILGLMFVRGLSGFASSYCLSW 91 (582)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988999999--9999999999999999999999999998646-866799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988326653213467014589883112221032021499999999999999988998878999999
Q 000702 843 FGLAAAQKLFVKMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLV 922 (1343)
Q Consensus 843 ~~~~~s~~l~~~l~~~il~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 922 (1343)
.+.+...+++.++++++++.|+.||++++.|++++|+++|++.++..+...+..++...+.+++.++++++++|++.+++
T Consensus 92 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~ 171 (582)
T 3b5x_A 92 VSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVL 171 (582)
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999869999977898789999999889999999999999999999999999999999829999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998799999999831559999998411530012247089999999999985424699999999999
Q 000702 923 IPMAVACLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWL 1002 (1343)
Q Consensus 923 i~~~~l~~~~~~~~~~~~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1002 (1343)
+..+++++.+..++.+..++..+......+.+.+++.|++.|+.+||+|+.++.+.+++.+..+...+..........|.
T Consensus 172 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3b5x_A 172 IVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999995199999708759999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999-9870599878879999999999999999999999999998766699999863499999998
Q 000702 1003 CLRMELLSTFVFAFCMVL-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPV 1081 (1343)
Q Consensus 1003 ~~~~~~i~~~~~~~~~~~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~ 1081 (1343)
.....++..+...++..+ ......|.+++|.+..++.+...+..++..+...+..+.....+++|+.++.+.+++.+.
T Consensus 252 ~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~- 330 (582)
T 3b5x_A 252 DPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDN- 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999999999999985998899999999999999999999999999999999999999999758976777-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 88899999999986089988999976899841001016842997999995999988899999831247986369992730
Q 000702 1082 IEDSRPPSSWPENGTIELIDLKVRYGENLPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNID 1161 (1343)
Q Consensus 1082 ~~~~~~~~~~p~~g~I~f~nvs~~Y~~~~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~d 1161 (1343)
.. .+.++..+.|+++||+++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.|
T Consensus 331 --~~--~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 406 (582)
T 3b5x_A 331 --GK--YEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHD 406 (582)
T ss_pred --CC--CCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf --77--77777888289999899728998654004169987999899989999979999999965778999879899998
Q ss_pred CCCCCHHHHHHCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 69999678852050655776436775443069899--8999999999998599347830148877423349988891388
Q 000702 1162 ISTIGLHDLRSRLGIIPQDPNLFEGTIRCNLDPLE--EHSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQR 1239 (1343)
Q Consensus 1162 i~~i~l~~LR~~i~iIpQdp~LF~gTIr~NLdp~~--~~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQr 1239 (1343)
+++++.+.+|++++++||+|.+|++|+++|+..+. +.++++++++++.++++++++++|+||||.++++|.+||||||
T Consensus 407 ~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~ 486 (582)
T 3b5x_A 407 VRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486 (582)
T ss_pred HHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 56388999964858982799053102999985668899999999999998798999984765334510688884799999
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999999834998799837887999898999999999736993799860483100135789999598796624925775
Q 000702 1240 QLVSLGRALLKQARILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLL 1319 (1343)
Q Consensus 1240 Qrl~LARAlL~~~~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll 1319 (1343)
||++||||++++|+||+||||||++|+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+
T Consensus 487 qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 566 (582)
T 3b5x_A 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADLL 566 (582)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999974999999978544689999999999999972899899993688999819989999899899977899998
Q ss_pred HCCCCHHHHHHHHHC
Q ss_conf 059927999999841
Q 000702 1320 EDKSSMFLKLVTEYS 1334 (1343)
Q Consensus 1320 ~~~~~~f~~l~~~~~ 1334 (1343)
+ .++.|+++++.+.
T Consensus 567 ~-~~~~~~~~~~~q~ 580 (582)
T 3b5x_A 567 A-QDGAYAQLHRIQF 580 (582)
T ss_pred H-CCCHHHHHHHHHH
T ss_conf 4-8858999999861
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=680.26 Aligned_cols=551 Identities=22% Similarity=0.281 Sum_probs=462.7
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999755544202777779999-98--7359999999998799999999999999999999999999999988
Q 000702 783 LAQVLFQFLQIASNWWMAWANPQTEGDQP-KV--NPMVLLVVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFVKMLRSV 859 (1343)
Q Consensus 783 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~--~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~i 859 (1343)
++.++..++....++++++..+....... .. ....++.+++++.++..++.+++.++....+.+...+++.++++++
T Consensus 26 ~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 105 (595)
T 2yl4_A 26 GFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTSGQRIVNRLRTSLFSSI 105 (595)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999973574026679999999999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 32665321346701458988311222103202149999999999999998899887899999999999999999999998
Q 000702 860 FRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLVGIIGVMTMVTWQVLLLVIPMAVACLWMQKYYMAS 939 (1343)
Q Consensus 860 l~~p~~ff~~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~~~~l~~~~~~~~~~~ 939 (1343)
++.|+.||++++.|++++|+++|++.++..+...+..++...+.+++.++++++++|++.++++..+++++.+...+.+.
T Consensus 106 ~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~ 185 (595)
T 2yl4_A 106 LRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVLSVVPPVSIIAVIYGRY 185 (595)
T ss_dssp HHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 81999997779848899999999999999999999999999999999999999981999999999999999999999999
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999983155999999841153001224708999999999998542469999999999999999999999999999
Q 000702 940 SRELVRIVSIQKSPIIHLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMV 1019 (1343)
Q Consensus 940 ~r~~~rl~~~~~spi~~~~~e~l~G~~tIraf~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~ 1019 (1343)
.++..+......+.+.+++.|++.|+.+||+|+.++.+.+++.+..+...+..........|......++..+...++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (595)
T 2yl4_A 186 LRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFFGATGLSGNLIVLSVLY 265 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999998119999983756999999999999999999999999999999999999999999999
Q ss_pred H-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE-E
Q ss_conf 9-9870599878879999999999999999999999999998766699999863499999998888999999999860-8
Q 000702 1020 L-LVSFPHGAIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPGEAPPVIEDSRPPSSWPENGT-I 1097 (1343)
Q Consensus 1020 ~-~~~~~~g~~~~~~~gl~l~~~~~~~~~l~~~~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~p~~g~-I 1097 (1343)
+ ......|.+++|.+..++.++..+..++..+...+..+.....+++|+.++.+.+++.+.. ...+ ...+..+. |
T Consensus 266 ~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~-~~~~~~~~~i 342 (595)
T 2yl4_A 266 KGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLPFN--EGVI-LNEKSFQGAL 342 (595)
T ss_dssp HHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCSS--CSBC-CCTTTCCCCE
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCC-CCCCCCCCEE
T ss_conf 999999869978999999999999999999999999999999999999999998389766777--7877-7767899838
Q ss_pred EEEEEEEEECCC-CCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCEE
Q ss_conf 998899997689-9841001016842997999995999988899999831247986369992730699996788520506
Q 000702 1098 ELIDLKVRYGEN-LPLVLHGITCAFPGGKKIGIVGRTGSGKSTLIQALFRLIEPACGRIIIDNIDISTIGLHDLRSRLGI 1176 (1343)
Q Consensus 1098 ~f~nvs~~Y~~~-~~~vL~~isf~I~~GekvgIVGrTGsGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~l~~LR~~i~i 1176 (1343)
+++||+++|+.+ ..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.|+++++.+.+|+++++
T Consensus 343 ~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 422 (595)
T 2yl4_A 343 EFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISLDGHDIRQLNPVWLRSKIGT 422 (595)
T ss_dssp EEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEETTEETTTBCHHHHHHSEEE
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHCEEE
T ss_conf 99988998589988812011279984998899989999979999999825857898379999998111799999732289
Q ss_pred ECCCCCCCCCCHHHHCCCCC-C---CCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 55776436775443069899-8---9999999999985993478301488774233499888913889999999983499
Q 000702 1177 IPQDPNLFEGTIRCNLDPLE-E---HSDREIWEALDKSQLGDIVRGKDQKLETPVLENGDNWSVGQRQLVSLGRALLKQA 1252 (1343)
Q Consensus 1177 IpQdp~LF~gTIr~NLdp~~-~---~sd~ei~~aL~~~~L~~~i~~lp~gLdt~i~e~G~nLS~GQrQrl~LARAlL~~~ 1252 (1343)
+||+|.+|++|+++|+..+. . .++++++++++.++++++++++|+|+|+.++|+|.+||||||||++||||++++|
T Consensus 423 v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~LSgGq~qrv~iAral~~~p 502 (595)
T 2yl4_A 423 VSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVLLSGGQKQRIAIARALLKNP 502 (595)
T ss_dssp ECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCCCCHHHHHHHHHHHHHHHCC
T ss_pred ECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 83688326877999984058776656899999999986979999747320135016887868999999999999997599
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHH
Q ss_conf 87998378879998989999999997369937998604831001357899995987966249257750599279999998
Q 000702 1253 RILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPGRLLEDKSSMFLKLVTE 1332 (1343)
Q Consensus 1253 ~ILiLDEaTs~lD~~te~~I~~~l~~~~~~~TvI~IAHRl~ti~~~DrIlvl~~G~ive~g~p~~Ll~~~~~~f~~l~~~ 1332 (1343)
+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++++++.|+++++.
T Consensus 503 ~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 582 (595)
T 2yl4_A 503 KILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYGKHEELLSKPNGIYRKLMNK 582 (595)
T ss_dssp SEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEECSCC------C--------
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 99999886668998999999999999965997999946878997599899998998999788999974787299999997
Q ss_pred HCCC
Q ss_conf 4115
Q 000702 1333 YSSR 1336 (1343)
Q Consensus 1333 ~~~~ 1336 (1343)
+...
T Consensus 583 q~~~ 586 (595)
T 2yl4_A 583 QSFI 586 (595)
T ss_dssp ----
T ss_pred HHCC
T ss_conf 4302
Done!