Query 000703
Match_columns 1342
No_of_seqs 405 out of 2924
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 17:04:22 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000703.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_474-477//hhsearch_pdb/000703hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 529.0 72.1 571 24-882 18-610 (611)
2 2ymu_A WD-40 repeat protein; u 1.0 1 1 513.8 81.0 560 17-880 11-577 (577)
3 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 506.8 66.2 620 16-882 609-1248(1249)
4 2ymu_A WD-40 repeat protein; u 1.0 1 1 479.7 75.8 550 55-915 7-561 (577)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 471.0 63.7 544 57-888 608-1212(1249)
6 1pgu_A Actin interacting prote 1.0 1 1 465.4 69.6 555 22-883 16-614 (615)
7 1nr0_A Actin interacting prote 1.0 1 1 459.0 70.8 554 77-915 20-593 (611)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 435.2 58.0 610 23-837 16-789 (902)
9 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 421.8 62.6 648 60-888 13-788 (902)
10 1pgu_A Actin interacting prote 1.0 1 1 412.0 63.4 538 77-915 20-596 (615)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=529.02 Aligned_cols=571 Identities=15% Similarity=0.154 Sum_probs=437.1
Q ss_pred CCCCCCEEECCCC-EEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 9997725727999-299972994999959996435752699889989777789969999980289765657788999986
Q 000703 24 RNNFGSADLSPSG-LLAFASGSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHL 102 (1342)
Q Consensus 24 ~~~~~a~~~s~~g-llA~g~~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s~~~~~~g~ 102 (1342)
+....+++|+|+| +||+++++.|.|||+.+++...+|.+|.. .|++++|+|+ |.
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~-----------~v~~~~~spd--------------g~ 72 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSH-----------QTTVAKTSPS--------------GY 72 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSS-----------CEEEEEECTT--------------SS
T ss_pred CCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCEEECCCCC-----------CEEEEEECCC--------------CC
T ss_conf 6823697667999979967999799945787242737658998-----------6599999999--------------96
Q ss_pred EEEEEECCCCEEEEECCCCE--EEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECC----CEEEEEECCCCEEEEEEE
Q ss_conf 99999499969998489993--999964899999986699985549997199999289----819999789992789980
Q 000703 103 LLAAADRHGRVALLDFRLRS--VVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGP----SVLSLYNTTSASCMWKYD 176 (1342)
Q Consensus 103 ~LASg~~dG~V~IWDv~tg~--~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~~d----~~i~lWd~~tG~~i~~~~ 176 (1342)
+||||+.||+|+|||+.+++ .... +.+|.+ +|.+++|+|++ ++|++++.+ +.+.+|| +|+++..+.
T Consensus 73 ~lasg~~d~~v~lWd~~~~~~~~~~~--~~~~~~-~v~~v~fs~dg---~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~ 144 (611)
T 1nr0_A 73 YCASGDVHGNVRIWDTTQTTHILKTT--IPVFSG-PVKDISWDSES---KRIAAVGEGRERFGHVFLFD--TGTSNGNLT 144 (611)
T ss_dssp EEEEEETTSEEEEEESSSTTCCEEEE--EECSSS-CEEEEEECTTS---CEEEEEECCSSCSEEEEETT--TCCBCBCCC
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEE--ECCCCC-CEEEEEECCCC---CEEEEEECCCCCEEEEEEEE--CCCCCCEEC
T ss_conf 89999489978994898984156676--225578-44899989999---97999989977366999963--899763254
Q ss_pred CCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 89975489996589999899980797299999249855430463589842751012355441026577899877675346
Q 000703 177 ASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYM 256 (1342)
Q Consensus 177 ~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~ 256 (1342)
+|...+.+++|+|....++++++.|+.+++||..+. +... .+ ..|...+
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-------~~~~---------~l---------------~~H~~~V 193 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKS---------TF---------------GEHTKFV 193 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEE---------EE---------------CCCSSCE
T ss_pred CCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCC-------EEEE---------EE---------------CCCCCCE
T ss_conf 788983699988999829999928980999979997-------5766---------52---------------0025716
Q ss_pred EEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECC-----CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 99999368872099974884999984688125899538-----9764418999859999799996798299997658944
Q 000703 257 VKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALP-----RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQ 331 (1342)
Q Consensus 257 ~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l~-----~~~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~ 331 (1342)
.+++|+||++.+++++.|++|++||+.+++.+..+... .+...+..+.++||++.|++++.|++|++|+..++.+
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCE
T ss_conf 99999799998999989991999889998286651366432356678789999979999999990898099996888701
Q ss_pred EEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 45674022122456666789862899970570245655310279999999764568988533432356752999997488
Q 000703 332 VHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDG 411 (1342)
Q Consensus 332 ~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG 411 (1342)
...+..... .........+ ++..+++++.||
T Consensus 274 ~~~~~~~~~---------~~~~~~~~~~----------------------------------------~~~~l~s~s~d~ 304 (611)
T 1nr0_A 274 EKTIPVGTR---------IEDQQLGIIW----------------------------------------TKQALVSISANG 304 (611)
T ss_dssp EEEEECCSS---------GGGCEEEEEE----------------------------------------CSSCEEEEETTC
T ss_pred EEEECCCCC---------CCCEEEEEEE----------------------------------------CCCEEEEEECCC
T ss_conf 344047887---------6640689997----------------------------------------388799995899
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 09999912464354434434346786411123469654457686750020034211224688899999877665553148
Q 000703 412 KVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKV 491 (1342)
Q Consensus 412 ~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 491 (1342)
.|++|+...+...
T Consensus 305 ~i~~~~~~~~~~~------------------------------------------------------------------- 317 (611)
T 1nr0_A 305 FINFVNPELGSID------------------------------------------------------------------- 317 (611)
T ss_dssp CEEEEETTTTEEE-------------------------------------------------------------------
T ss_pred CEEEEECCCCCCC-------------------------------------------------------------------
T ss_conf 6899968899744-------------------------------------------------------------------
Q ss_pred EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEE-EECCCCEEEEEECCC
Q ss_conf 8843011257662999963997210012699877899989999928991999958999288996-332787479997599
Q 000703 492 SLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASF-SVHNGTVRGLRWLGN 570 (1342)
Q Consensus 492 ~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg~~~~~l-~~H~~~V~~i~fs~~ 570 (1342)
..+.+|..+|++++|+| ++.++++++.||+|++||+.++.+...+ .+|...|.+++|+++
T Consensus 318 ---~~~~gh~~~v~~l~~sp----------------dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 318 ---QVRYGHNKAITALSSSA----------------DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp ---EEECCCSSCEEEEEECT----------------TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred ---EEECCCCCCEEEEEEEC----------------CCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCC
T ss_conf ---69837888889999918----------------99989999589849999788792563216677650789998789
Q ss_pred CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEE
Q ss_conf 83899953876434573018799997679820014881268999969999968999899999899789996657861133
Q 000703 571 SRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLR 650 (1342)
Q Consensus 571 ~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~~l~ 650 (1342)
+.+++.+.+ +.+++|+..++.................+++|+|+|++++++ .++.+++|+. .. +.
T Consensus 379 ~~l~s~s~d----------~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~-~~~~v~~~~~-~~---~~ 443 (611)
T 1nr0_A 379 GDLFTVSWD----------DHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAA-CYKHIAIYSH-GK---LT 443 (611)
T ss_dssp SCEEEEETT----------TEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEE-ESSEEEEEET-TE---EE
T ss_pred CCEEEEECC----------CCEEEEECCCCCCCCCCEEEEECCCCCCEEEEECCCCEEEEE-ECCEEEEEEC-CC---EE
T ss_conf 969999848----------966895468854356521200148997079980799699999-6763999848-94---34
Q ss_pred EC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 02--6764899985999999999999976666557787755778666642378998677888867899985999956997
Q 000703 651 SL--ALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGA 728 (1342)
Q Consensus 651 ~l--~~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~ 728 (1342)
.+ ...+.+++|+|+ +..+|+++.|++
T Consensus 444 ~~~~~~~v~~va~spd----------------------------------------------------g~~lasgs~D~~ 471 (611)
T 1nr0_A 444 EVPISYNSSCVALSND----------------------------------------------------KQFVAVGGQDSK 471 (611)
T ss_dssp EEECSSCEEEEEECTT----------------------------------------------------SCEEEEEETTSE
T ss_pred EEECCCCCEEEEEECC----------------------------------------------------CCEEEEECCCCE
T ss_conf 6406889549999289----------------------------------------------------989999689973
Q ss_pred EEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCC-CCE-EE--ECCCCCCEEEEEE
Q ss_conf 99999349823126778899752355662999854--699999996799499998999-962-43--0146665789999
Q 000703 729 LGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTT-GHS-SQ--FSTHREGIRRIKF 802 (1342)
Q Consensus 729 I~vwdv~g~~i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iWDl~t-~~~-~~--l~~H~~~V~~I~F 802 (1342)
|++|++.+..+..... .+|.+.|++++| ||++|++++.|++|++||+.+ ++. .. +.+|.+.|.+++|
T Consensus 472 v~lwd~~~~~~~~~~~-------~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~f 544 (611)
T 1nr0_A 472 VHVYKLSGASVSEVKT-------IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW 544 (611)
T ss_dssp EEEEEEETTEEEEEEE-------EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE
T ss_pred EEEEECCCCCEEEEEC-------CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEE
T ss_conf 9999945992224101-------577886079999899998999948998999885778722321026404664258998
Q ss_pred ECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC-CCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEEC
Q ss_conf 1489999877879999889819999889887433-233477779984899998079988999869999968992999971
Q 000703 803 SPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLA-NSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSSFRLIEV 881 (1342)
Q Consensus 803 SP~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~-~~l~~~h~~~~~V~~l~w~~~~~~~~~~l~L~sas~DgsIrvWdi 881 (1342)
+|+ + ++|++++.|++|+|||+.+++... ..+ .+|. ...|.+++|+|+ +. |++++.|++||+|++
T Consensus 545 spd--g----~~lasgs~D~~v~lW~~~~~~~~~~~~~-~~h~-~~~v~~v~fs~d----~~---l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 545 SPD--N----VRLATGSLDNSVIVWNMNKPSDHPIIIK-GAHA-MSSVNSVIWLNE----TT---IVSAGQDSNIKFWNV 609 (611)
T ss_dssp CTT--S----SEEEEEETTSCEEEEETTCTTSCCEEET-TSST-TSCEEEEEEEET----TE---EEEEETTSCEEEEEC
T ss_pred CCC--C----CEEEEEECCCCEEEEECCCCCCCCCHHH-CCCC-CCCEEEEEECCC----CE---EEEECCCCCEEEEEC
T ss_conf 998--9----9799997997299997887555632644-4676-567118998589----97---999528877899844
Q ss_pred C
Q ss_conf 4
Q 000703 882 N 882 (1342)
Q Consensus 882 ~ 882 (1342)
.
T Consensus 610 ~ 610 (611)
T 1nr0_A 610 P 610 (611)
T ss_dssp C
T ss_pred C
T ss_conf 4
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=513.76 Aligned_cols=560 Identities=16% Similarity=0.227 Sum_probs=445.6
Q ss_pred CCCCCCCCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC
Q ss_conf 25899989997725727999-299972-9949999599964357526998899897777899699999802897656577
Q 000703 17 MLPGPPSRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLS 94 (1342)
Q Consensus 17 ~lpg~~~~~~~~a~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s 94 (1342)
.|.| |.+.+.|++|||+| +||+|+ ++.|.|||. +++.+++|.+|.. .|++++|+|+
T Consensus 11 ~L~G--H~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~-----------~V~~l~fspd-------- 68 (577)
T 2ymu_A 11 RLEA--HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----------SVWGVAFSPD-------- 68 (577)
T ss_dssp EECC--CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-----------CEEEEEECTT--------
T ss_pred EECC--CCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCC-----------CEEEEEECCC--------
T ss_conf 9878--9985799999899899999938998999979-9978999968989-----------9899999899--------
Q ss_pred CCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEE
Q ss_conf 88999986999994999699984899939999648999999866999855499971999992898199997899927899
Q 000703 95 TEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWK 174 (1342)
Q Consensus 95 ~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i~~ 174 (1342)
+.+||+++.||+|+|||. +++.+..+ .+|.. +|.+++|+|++ .+|++++.++.+++|+... .....
T Consensus 69 ------g~~las~~~d~~i~vWd~-~~~~~~~~--~~~~~-~v~~~~~s~d~---~~l~~~~~d~~~~~~~~~~-~~~~~ 134 (577)
T 2ymu_A 69 ------GQTIASASDDKTVKLWNR-NGQLLQTL--TGHSS-SVRGVAFSPDG---QTIASASDDKTVKLWNRNG-QLLQT 134 (577)
T ss_dssp ------SSEEEEEETTSCEEEEET-TSCEEEEE--CCCSS-CEEEEEECTTS---SEEEEEETTSCEEEEETTC-CEEEE
T ss_pred ------CCEEEEEECCCEEEEEEC-CCCEEEEE--ECCCC-CEEEEEECCCC---CEEEEECCCCCEEECCCCC-CEEEE
T ss_conf ------999999969897999989-99789999--78999-88999998999---9899980798335202355-20011
Q ss_pred EECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 80899754899965899998999807972999992498554304635898427510123554410265778998776753
Q 000703 175 YDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPL 254 (1342)
Q Consensus 175 ~~~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~ 254 (1342)
...+...+.++.+.| +...++..+.++.+.+|+.... . .... ..+..
T Consensus 135 ~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~-~~~~---------------------------~~~~~ 181 (577)
T 2ymu_A 135 LTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQ----L-LQTL---------------------------TGHSS 181 (577)
T ss_dssp ECCCSSCEEEEEECT-TSSCEEEEETTSEEEEECTTSC----E-EEEE---------------------------ECCSS
T ss_pred CCCCCCCEEEEEEEC-CCCCCEECCCCCCEECCCCCEE----E-EEEC---------------------------CCCCC
T ss_conf 047777435554203-7763200255531000000000----0-0002---------------------------68776
Q ss_pred CEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEE
Q ss_conf 46999993688720999748849999846881258995389764418999859999799996798299997658944456
Q 000703 255 YMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHV 334 (1342)
Q Consensus 255 ~~~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l~~~~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~~~~ 334 (1342)
.+..+.|+|+++.+++++.|+.|++||.. ++.+..+.. +...+..+.++||+..|++++.|++|++|+.. +..+..
T Consensus 182 ~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~~--~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~~ 257 (577)
T 2ymu_A 182 SVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT 257 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCEEEEEECC-CCEEEEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEEE
T ss_conf 35665416997789998599989999499-968999946--88988999997999999999189989999599-979999
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf 74022122456666789862899970570245655310279999999764568988533432356752999997488099
Q 000703 335 MCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVW 414 (1342)
Q Consensus 335 ~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~ 414 (1342)
+... ...+..+.++++ +..+++++.||.|+
T Consensus 258 ~~~~------------~~~v~~v~~~~d--------------------------------------~~~l~~~~~d~~i~ 287 (577)
T 2ymu_A 258 LTGH------------SSSVNGVAFRPD--------------------------------------GQTIASASDDKTVK 287 (577)
T ss_dssp ECCC------------SSCEEEEEECTT--------------------------------------SSEEEEEETTSCEE
T ss_pred EECC------------CCCEEEEEECCC--------------------------------------CCEEEEEECCCEEE
T ss_conf 8068------------898799999689--------------------------------------99999995999799
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 99912464354434434346786411123469654457686750020034211224688899999877665553148884
Q 000703 415 NWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLD 494 (1342)
Q Consensus 415 ~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~ 494 (1342)
+|+..... . .
T Consensus 288 ~w~~~~~~---------------------------~----------------------------------------~--- 297 (577)
T 2ymu_A 288 LWNRNGQL---------------------------L----------------------------------------Q--- 297 (577)
T ss_dssp EEETTSCE---------------------------E----------------------------------------E---
T ss_pred EEECCCCE---------------------------E----------------------------------------E---
T ss_conf 99489958---------------------------9----------------------------------------9---
Q ss_pred EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE
Q ss_conf 30112576629999639972100126998778999899999289919999589992889963327874799975998389
Q 000703 495 GQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRLV 574 (1342)
Q Consensus 495 G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg~~~~~l~~H~~~V~~i~fs~~~~li 574 (1342)
.+.+|..+|++++++| ++.++++++.||+|++||... .....+.+|...|.+++|+++++.+
T Consensus 298 -~~~~h~~~v~~~~~~~----------------~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l 359 (577)
T 2ymu_A 298 -TLTGHSSSVWGVAFSP----------------DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTI 359 (577)
T ss_dssp -EECCCSSCEEEEEECT----------------TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEE
T ss_pred -EEECCCCCEEEEEECC----------------CCCEEEEEECCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCCEE
T ss_conf -9706889769999999----------------999999996999599996999-7257874788977999998999999
Q ss_pred EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECC-
Q ss_conf 9953876434573018799997679820014881268999969999968999899999899789996657861133026-
Q 000703 575 SFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLA- 653 (1342)
Q Consensus 575 S~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~~l~~l~- 653 (1342)
..+.. ++.+++||. ++. .+..+.+ |..+|++++|+|+|++|++++.|+.|++||. ++.+++.+.
T Consensus 360 ~~~~~---------dg~v~~~~~-~~~--~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~--~~~~~~~~~~ 424 (577)
T 2ymu_A 360 ASASD---------DKTVKLWNR-NGQ--LLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTG 424 (577)
T ss_dssp EEEET---------TSEEEEEET-TCC--EEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT--TCCEEEEEEC
T ss_pred EEEEC---------CCEEEEECC-CCC--EEEEECC-CCCCEEEEEECCCCCEEEEEECCCEEEEEEC--CCCEEEEECC
T ss_conf 99969---------998999908-997--8998527-8897489999899999999949998999969--9978989628
Q ss_pred --CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEE
Q ss_conf --764899985999999999999976666557787755778666642378998677888867899985999956997999
Q 000703 654 --LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALGV 731 (1342)
Q Consensus 654 --~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~I~v 731 (1342)
..++.++|+|+ +..+++++.|++|++
T Consensus 425 ~~~~v~~~~~s~d----------------------------------------------------~~~l~~~~~d~~v~~ 452 (577)
T 2ymu_A 425 HSSSVWGVAFSPD----------------------------------------------------DQTIASASDDKTVKL 452 (577)
T ss_dssp CSSCEEEEEECTT----------------------------------------------------SSEEEEEETTSEEEE
T ss_pred CCCCEEEEEECCC----------------------------------------------------CCEEEEECCCCEEEE
T ss_conf 8997579999899----------------------------------------------------999999939998999
Q ss_pred EEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCC
Q ss_conf 99349823126778899752355662999854--6999999967994999989999624301466657899991489999
Q 000703 732 FEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGHSSQFSTHREGIRRIKFSPVVPGD 809 (1342)
Q Consensus 732 wdv~g~~i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iWDl~t~~~~~l~~H~~~V~~I~FSP~~~g~ 809 (1342)
|+.+++.++. +.+|...|.+++| ++++|++++.|++|++||......+.+.+|...|++|+|+|+ +
T Consensus 453 w~~~~~~~~~---------~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~d--g- 520 (577)
T 2ymu_A 453 WNRNGQLLQT---------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--G- 520 (577)
T ss_dssp EETTSCEEEE---------EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT--S-
T ss_pred EECCCCEEEE---------ECCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCEEEEEECCC--C-
T ss_conf 9799988999---------727899778999969999999991989799993999789998679999899999189--9-
Q ss_pred CCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 87787999988981999988988743323347777998489999807998899986999996899299997
Q 000703 810 RSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSSFRLIE 880 (1342)
Q Consensus 810 ~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~~h~~~~~V~~l~w~~~~~~~~~~l~L~sas~DgsIrvWd 880 (1342)
.+|++++.|++|++||.. ++++ .++ .+|. ..|++++|+|+ ++ +|++++.|++|++||
T Consensus 521 ---~~l~s~~~dg~v~lwd~~-~~~~-~~~-~~h~--~~v~~~~fs~d----g~--~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 ---QTIASASDDKTVKLWNRN-GQLL-QTL-TGHS--SSVWGVAFSPD----GQ--TIASASSDKTVKLWN 577 (577)
T ss_dssp ---SCEEEEETTSEEEEECTT-SCEE-EEE-ECCS--SCEEEEEECTT----SS--CEEEEETTSCEEEEC
T ss_pred ---CEEEEEECCCEEEEEECC-CCEE-EEE-CCCC--CCEEEEEECCC----CC--EEEEEECCCEEEEEC
T ss_conf ---999999896999999699-9789-897-1888--88789999689----99--999990899999969
No 3
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=506.84 Aligned_cols=620 Identities=16% Similarity=0.204 Sum_probs=461.1
Q ss_pred CCCCCCCCCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 125899989997725727999-299972-994999959996435752699889989777789969999980289765657
Q 000703 16 FMLPGPPSRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLL 93 (1342)
Q Consensus 16 ~~lpg~~~~~~~~a~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~ 93 (1342)
.+++| |...+.+++|+|+| ++|.|+ ++.|.|||..+++.+.++.+|.. .|++++|+|+
T Consensus 609 ~~~~~--h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-----------~v~~~~~s~~------- 668 (1249)
T 3sfz_A 609 LVVRP--HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-----------EVLCCAFSSD------- 668 (1249)
T ss_dssp EEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-----------CEEEEEECTT-------
T ss_pred EEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCC-----------CEEEEEEECC-------
T ss_conf 78716--666489999879999899994889499999899978887606777-----------7899999269-------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEE
Q ss_conf 78899998699999499969998489993999964899999986699985549997199999289819999789992789
Q 000703 94 STEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMW 173 (1342)
Q Consensus 94 s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i~ 173 (1342)
+.+||+|+.||+|+|||+.+++.+..+ .+|.. +|.+++|+|+++. .++++++.|+.|.+||+.+++++.
T Consensus 669 -------~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 669 -------DSYIATCSADKKVKIWDSATGKLVHTY--DEHSE-QVNCCHFTNKSNH-LLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp -------SSEEEEEETTSEEEEEETTTCCEEEEE--ECCSS-CEEEEEECSSSSC-CEEEEEETTSCEEEEETTSSSEEE
T ss_pred -------CCEEEEEECCCEEEEEECCCCCEEEEE--CCCCC-CEEEEEEECCCCC-EEEEEEECCCEEEEEECCCCCHHH
T ss_conf -------998999818995999877999368999--58997-3799998408996-599998089709999899963422
Q ss_pred EEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 98089975489996589999899980797299999249855430463589842751012355441026577899877675
Q 000703 174 KYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFP 253 (1342)
Q Consensus 174 ~~~~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~ 253 (1342)
.+.+|...+.+++|+| +++.+++++.||.+.+||+..... .+.+..... ..... .+ .....
T Consensus 738 ~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~----~~~~~~~~~---~~~~~----------~~-~~~~~ 798 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANE----RKSINVKRF---FLSSE----------DP-PEDVE 798 (1249)
T ss_dssp EECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEE----EEEEECCCC---C-------------------CCC
T ss_pred EECCCCCCEEEEEEEC-CCCEEEEEECCCEEEEEECCCCCC----CCEECCCCC---CCCCC----------CC-CCCCC
T ss_conf 0127779788999925-999899997898599996888865----530202321---02467----------76-44565
Q ss_pred CCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf 34699999368872099974884999984688125899538976441899985999979999679829999765894445
Q 000703 254 LYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVH 333 (1342)
Q Consensus 254 ~~~~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l~~~~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~~~ 333 (1342)
..+..++|+|+++.++.++ ++.+.+||+.++..+..+.. .+...+..+.++|++..+++++.||+|++|+..++....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~ 876 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT-GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA 876 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC-SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE
T ss_pred CEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECC-CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEE
T ss_conf 0179999978998899975-89599999568972357747-877760799982788889999479869999867895653
Q ss_pred EEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf 67402212245666678986289997057024565531027999999976456898853343235675299999748809
Q 000703 334 VMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKV 413 (1342)
Q Consensus 334 ~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I 413 (1342)
.+.++ ...|..+.++++ +..+++++.||.|
T Consensus 877 ~~~~h------------~~~v~~v~~spd--------------------------------------g~~l~s~s~dg~v 906 (1249)
T 3sfz_A 877 DCRGH------------LSWVHGVMFSPD--------------------------------------GSSFLTASDDQTI 906 (1249)
T ss_dssp EECCC------------SSCEEEEEECTT--------------------------------------SSEEEEEETTSCE
T ss_pred ECCCC------------CCCEEEEEECCC--------------------------------------CCEEEEEECCCEE
T ss_conf 22787------------665689999899--------------------------------------9989999589728
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99991246435443443434678641112346965445768675002003421122468889999987766555314888
Q 000703 414 WNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSL 493 (1342)
Q Consensus 414 ~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l 493 (1342)
++|++.......... ... ...+.+... + ......+. .. ........
T Consensus 907 ~vw~~~~~~~~~~~~------~~~-~~~~~~~~~--------~-~~~~~~~~-------~~-----------~~~~~~~~ 952 (1249)
T 3sfz_A 907 RVWETKKVCKNSAIV------LKQ-EIDVVFQEN--------E-TMVLAVDN-------IR-----------GLQLIAGK 952 (1249)
T ss_dssp EEEEHHHHHSCCSSS------EEE-EEEEEEETT--------E-EEEEEEES-------SS-----------SEEEEEES
T ss_pred EEEECCCCCEEEEEC------CCC-EEEEEECCC--------C-CEEEEECC-------CC-----------CEEEEECC
T ss_conf 988746652010211------331-036897599--------8-68998137-------76-----------24898447
Q ss_pred EEE-CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCC
Q ss_conf 430-1125766299996399721001269987789998999992899199995899928899633278747999759983
Q 000703 494 DGQ-LQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSR 572 (1342)
Q Consensus 494 ~G~-l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg~~~~~l~~H~~~V~~i~fs~~~~ 572 (1342)
.+. .......+++++++| ++.++++|+.+|.|++||+.++.....+.+|...|++++|+++++
T Consensus 953 ~~~~~~~~~~~i~~~~~sp----------------~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 953 TGQIDYLPEAQVSCCCLSP----------------HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK 1016 (1249)
T ss_dssp SCCEEEECCSCEEEEEECT----------------TSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS
T ss_pred CCEEEECCCCCEEEEEECC----------------CCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCC
T ss_conf 6508972567278999958----------------997799986999889997578723443036777168999989999
Q ss_pred EE-EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEE
Q ss_conf 89-99538764345730187999976798200148812689999699999689998999998997899966578611330
Q 000703 573 LV-SFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRS 651 (1342)
Q Consensus 573 li-S~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~~l~~ 651 (1342)
.+ +.+. ++.|++||+.++....+ . .|...|.++.++|++ .+++++.|+.+++||+ .++.+++.
T Consensus 1017 ~l~s~~~----------dg~i~vwd~~~~~~~~~---~-~~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~-~~~~~~~~ 1080 (1249)
T 3sfz_A 1017 TLISSSE----------DSVIQVWNWQTGDYVFL---Q-AHQETVKDFRLLQDS-RLLSWSFDGTVKVWNV-ITGRIERD 1080 (1249)
T ss_dssp CEEEECS----------SSBEEEEETTTTEEECC---B-CCSSCEEEEEECSSS-EEEEEESSSEEEEEET-TTTCCCEE
T ss_pred EEEEECC----------CCEEEEEECCCCCEEEE---E-CCCCCEEEEEECCCC-CEEEEECCCCEEEEEC-CCCCEEEE
T ss_conf 8999869----------98799998799966898---5-278738999990899-5899978896899888-98865588
Q ss_pred CC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 26---764899985999999999999976666557787755778666642378998677888867899985999956997
Q 000703 652 LA---LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGA 728 (1342)
Q Consensus 652 l~---~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~ 728 (1342)
+. ..++++.|+|+ +..+++++.||+
T Consensus 1081 ~~~~~~~v~~~~~s~d----------------------------------------------------~~~l~s~s~d~~ 1108 (1249)
T 3sfz_A 1081 FTCHQGTVLSCAISSD----------------------------------------------------ATKFSSTSADKT 1108 (1249)
T ss_dssp EECCSSCCCCEEECSS----------------------------------------------------SSSCEEECCSSC
T ss_pred ECCCCCCEEEEEECCC----------------------------------------------------CCEEEEECCCCC
T ss_conf 7466884899999899----------------------------------------------------998999849994
Q ss_pred EEEEEECCCE-EECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EEEE---------CCCCC
Q ss_conf 9999934982-3126778899752355662999854--69999999679949999899996-2430---------14666
Q 000703 729 LGVFEVHGRR-IRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SSQF---------STHRE 795 (1342)
Q Consensus 729 I~vwdv~g~~-i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iWDl~t~~-~~~l---------~~H~~ 795 (1342)
|++|++.... +. .+.+|.+.|++++| +|++|++|+.||+|++||+.++. ...+ .+|.+
T Consensus 1109 v~iwd~~~~~~~~---------~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLH---------ELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGG 1179 (1249)
T ss_dssp CCEECSSSSSCSB---------CCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCS
T ss_pred EEEEECCCCCEEE---------EECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 8998789850012---------5506877679999979999899982899799998899945788514444421025674
Q ss_pred CEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCC
Q ss_conf 57899991489999877879999889819999889887433233477779984899998079988999869999968992
Q 000703 796 GIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSS 875 (1342)
Q Consensus 796 ~V~~I~FSP~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~~h~~~~~V~~l~w~~~~~~~~~~l~L~sas~Dgs 875 (1342)
+|.+++|+|+ + .+++++ +|+|++||+.+++.+ ..+ .+| ...|.++.|+|+ +. .|++++.||.
T Consensus 1180 ~v~~l~fs~d--g----~~l~s~--~g~v~vwd~~~g~~~-~~~-~~~--~~~i~~~~~s~d----g~--~l~~~~~dg~ 1241 (1249)
T 3sfz_A 1180 WVTDVCFSPD--S----KTLVSA--GGYLKWWNVATGDSS-QTF-YTN--GTNLKKIHVSPD----FR--TYVTVDNLGI 1241 (1249)
T ss_dssp CCCEEEECTT--S----SCEEEE--SSSEEEBCSSSCBCC-CCC-CCS--SCCCCCCEECSS----SC--CEEEECTTCC
T ss_pred EEEEEEECCC--C----CEEEEC--CCEEEEEECCCCCEE-EEE-ECC--CCCCCEEEECCC----CC--EEEEECCCCE
T ss_conf 2899999789--9----989977--985999898889500-464-004--775327999789----87--7999668817
Q ss_pred EEEEECC
Q ss_conf 9999714
Q 000703 876 FRLIEVN 882 (1342)
Q Consensus 876 IrvWdi~ 882 (1342)
+.+|++.
T Consensus 1242 v~vw~l~ 1248 (1249)
T 3sfz_A 1242 LYILQVL 1248 (1249)
T ss_dssp EEEECCC
T ss_pred EEEEEEC
T ss_conf 9997643
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=479.68 Aligned_cols=550 Identities=14% Similarity=0.199 Sum_probs=429.5
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCC
Q ss_conf 43575269988998977778996999998028976565778899998699999499969998489993999964899999
Q 000703 55 QLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPK 134 (1342)
Q Consensus 55 ~~~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~ 134 (1342)
+..+.|.||+. .|++++|+|+ |.+||||+.||.|+|||. +++.+..| .+|..
T Consensus 7 ~e~~~L~GH~~-----------~V~~~a~spd--------------g~~las~~~d~~v~iWd~-~~~~~~~l--~gh~~ 58 (577)
T 2ymu_A 7 KERNRLEAHSS-----------SVRGVAFSPD--------------GQTIASASDDKTVKLWNR-NGQLLQTL--TGHSS 58 (577)
T ss_dssp CEEEEECCCSS-----------CEEEEEECTT--------------SSCEEEEETTSEEEEECT-TSCEEEEE--ECCSS
T ss_pred EEEEEECCCCC-----------CEEEEEECCC--------------CCEEEEEECCCEEEEEEC-CCCEEEEE--ECCCC
T ss_conf 89439878998-----------5799999899--------------899999938998999979-99789999--68989
Q ss_pred CCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCC
Q ss_conf 98669998554999719999928981999978999278998089975489996589999899980797299999249855
Q 000703 135 LGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKE 214 (1342)
Q Consensus 135 ~~V~~l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i~~~~~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~ 214 (1342)
+|.+++|+|++ ++|++++.|+.|++||. +|+++..+.+|...+.+++|+| |++.+++++.|+.+.+|+.....
T Consensus 59 -~V~~l~fspdg---~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~- 131 (577)
T 2ymu_A 59 -SVWGVAFSPDG---QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQL- 131 (577)
T ss_dssp -CEEEEEECTTS---SEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCE-
T ss_pred -CEEEEEECCCC---CEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECC-CCCEEEEECCCCCEEECCCCCCE-
T ss_conf -98999998999---99999969897999989-9978999978999889999989-99989998079833520235520-
Q ss_pred CCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECC
Q ss_conf 43046358984275101235544102657789987767534699999368872099974884999984688125899538
Q 000703 215 DEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALP 294 (1342)
Q Consensus 215 ~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l~ 294 (1342)
.... ..+...+..+.|+|+++.++....++.+.+|+....... ...
T Consensus 132 ----~~~~---------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 177 (577)
T 2ymu_A 132 ----LQTL---------------------------TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TLT-- 177 (577)
T ss_dssp ----EEEE---------------------------CCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEE-EEE--
T ss_pred ----EEEC---------------------------CCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEEEEE-ECC--
T ss_conf ----0110---------------------------477774355542037763200255531000000000000-026--
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCC
Q ss_conf 97644189998599997999967982999976589444567402212245666678986289997057024565531027
Q 000703 295 RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCL 374 (1342)
Q Consensus 295 ~~~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~ 374 (1342)
.....+..+.+.|++..|++++.||+|++|+.. ++....+.... ..+..+.++++
T Consensus 178 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~------------~~v~~~~~s~d------------ 232 (577)
T 2ymu_A 178 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHS------------SSVRGVAFSPD------------ 232 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCS------------SCEEEEEECTT------------
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCEEEEEECC-CCEEEEEECCC------------CCEEEEEECCC------------
T ss_conf 877635665416997789998599989999499-96899994688------------98899999799------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999997645689885334323567529999974880999991246435443443434678641112346965445768
Q 000703 375 DAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMAS 454 (1342)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~ 454 (1342)
+..+++++.||.|++|+..... .
T Consensus 233 --------------------------g~~l~~~~~d~~i~~w~~~~~~---------------------------~---- 255 (577)
T 2ymu_A 233 --------------------------GQTIASASDDKTVKLWNRNGQL---------------------------L---- 255 (577)
T ss_dssp --------------------------SSCEEEEETTSCEEEECTTSCE---------------------------E----
T ss_pred --------------------------CCEEEEEECCCEEEEEECCCCE---------------------------E----
T ss_conf --------------------------9999999189989999599979---------------------------9----
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 67500200342112246888999998776655531488843011257662999963997210012699877899989999
Q 000703 455 SADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVAL 534 (1342)
Q Consensus 455 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAs 534 (1342)
. .+.+|..+|+++++.| ++..+++
T Consensus 256 ------------------------------------~----~~~~~~~~v~~v~~~~----------------d~~~l~~ 279 (577)
T 2ymu_A 256 ------------------------------------Q----TLTGHSSSVNGVAFRP----------------DGQTIAS 279 (577)
T ss_dssp ------------------------------------E----EECCCSSCEEEEEECT----------------TSSEEEE
T ss_pred ------------------------------------E----EEECCCCCEEEEEECC----------------CCCEEEE
T ss_conf ------------------------------------9----9806889879999968----------------9999999
Q ss_pred EECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCC
Q ss_conf 92899199995899928899633278747999759983899953876434573018799997679820014881268999
Q 000703 535 GTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERA 614 (1342)
Q Consensus 535 gs~dGtI~iWDl~tg~~~~~l~~H~~~V~~i~fs~~~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~ 614 (1342)
++.|++|++||. ++.+...+.+|...|.+++|++++..+..+.. ++.+++||..... +..+.+ |..
T Consensus 280 ~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~---------d~~i~~w~~~~~~---~~~~~~-~~~ 345 (577)
T 2ymu_A 280 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---------DKTVKLWNRNGQH---LQTLTG-HSS 345 (577)
T ss_dssp EETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEET---------TSCEEEEETTSCE---EEEECC-CSS
T ss_pred EECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEC---------CCEEEEEECCCCE---EEEEEC-CCC
T ss_conf 959997999948-99589997068897699999999999999969---------9959999699972---578747-889
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 969999968999899999899789996657861133026---76489998599999999999997666655778775577
Q 000703 615 PIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLA---LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTD 691 (1342)
Q Consensus 615 ~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~~l~~l~---~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 691 (1342)
++.+++|+|+|+++++++.|+.+++||. ++.++..+. ..+++++|+|+
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~--~~~~~~~~~~~~~~v~~~~~s~d--------------------------- 396 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPD--------------------------- 396 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEET--TCCEEEEEECCSSCEEEEEECTT---------------------------
T ss_pred CEEEEEECCCCCEEEEEECCCEEEEECC--CCCEEEEECCCCCCEEEEEECCC---------------------------
T ss_conf 7799999899999999969998999908--99789985278897489999899---------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEE
Q ss_conf 866664237899867788886789998599995699799999349823126778899752355662999854--699999
Q 000703 692 GVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVV 769 (1342)
Q Consensus 692 ~~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~I~vwdv~g~~i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lv 769 (1342)
++.+++++.|+.|++|+.+++.++. +.+|...|++++| |+++|+
T Consensus 397 -------------------------g~~l~~~~~d~~v~~~~~~~~~~~~---------~~~~~~~v~~~~~s~d~~~l~ 442 (577)
T 2ymu_A 397 -------------------------GQTIASASDDKTVKLWNRNGQLLQT---------LTGHSSSVWGVAFSPDDQTIA 442 (577)
T ss_dssp -------------------------SSCEEEEETTSEEEEECTTCCEEEE---------EECCSSCEEEEEECTTSSEEE
T ss_pred -------------------------CCEEEEEECCCEEEEEECCCCEEEE---------ECCCCCCEEEEEECCCCCEEE
T ss_conf -------------------------9999999499989999699978989---------628899757999989999999
Q ss_pred EEECCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 99679949999899996243014666578999914899998778799998898199998898874332334777799848
Q 000703 770 MGDRSGNIRWWDVTTGHSSQFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLV 849 (1342)
Q Consensus 770 sgs~DG~I~iWDl~t~~~~~l~~H~~~V~~I~FSP~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~~h~~~~~V 849 (1342)
+++.|++|++||........+.+|...|++++|+|+ + .+|++++.|++|++||... +.+ ..+ .+|. ..|
T Consensus 443 ~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd--~----~~las~~~d~~i~iw~~~~-~~~-~~~-~~h~--~~v 511 (577)
T 2ymu_A 443 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--G----QTIASASDDKTVKLWNRNG-QLL-QTL-TGHS--SSV 511 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT--S----CEEEEEETTSEEEEEETTS-CEE-EEE-ECCS--SCE
T ss_pred EECCCCEEEEEECCCCEEEEECCCCCCEEEEEECCC--C----CEEEEEECCCEEEEECCCC-CEE-EEE-ECCC--CCE
T ss_conf 993999899997999889997278997789999699--9----9999991989799993999-789-998-6799--998
Q ss_pred EEEEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 999980799889998699999689929999714884002434442000012568986664003530
Q 000703 850 LELDWLPTRTDKNDPLVLCIAGADSSFRLIEVNTSEKKIGYTSQSRAIKERFRPMPLCLPILLPTS 915 (1342)
Q Consensus 850 ~~l~w~~~~~~~~~~l~L~sas~DgsIrvWdi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 915 (1342)
..++|+|+ ++ +|++++.||+|++||.. +++.. .... +..++.+..+.|.+
T Consensus 512 ~~l~~s~d----g~--~l~s~~~dg~v~lwd~~-~~~~~-------~~~~--h~~~v~~~~fs~dg 561 (577)
T 2ymu_A 512 RGVAFSPD----GQ--TIASASDDKTVKLWNRN-GQLLQ-------TLTG--HSSSVWGVAFSPDG 561 (577)
T ss_dssp EEEEECTT----SS--CEEEEETTSEEEEECTT-SCEEE-------EEEC--CSSCEEEEEECTTS
T ss_pred EEEEECCC----CC--EEEEEECCCEEEEEECC-CCEEE-------EECC--CCCCEEEEEECCCC
T ss_conf 99999189----99--99999896999999699-97898-------9718--88887899996899
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=471.01 Aligned_cols=544 Identities=12% Similarity=0.076 Sum_probs=415.6
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 57526998899897777899699999802897656577889999869999949996999848999399996489999998
Q 000703 57 ISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLG 136 (1342)
Q Consensus 57 ~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~ 136 (1342)
..++.+|.. .|++++|+|+ |.+||+|+.||+|+|||+.+++.+..+ .+|.. +
T Consensus 608 ~~~~~~h~~-----------~v~~~~~s~~--------------~~~l~s~~~d~~i~vw~~~~~~~~~~~--~~h~~-~ 659 (1249)
T 3sfz_A 608 RLVVRPHTD-----------AVYHACFSQD--------------GQRIASCGADKTLQVFKAETGEKLLDI--KAHED-E 659 (1249)
T ss_dssp SEEECCCSS-----------CEEEEEECTT--------------SSEEEEEETTSCEEEEETTTCCEEEEE--CCCSS-C
T ss_pred EEEEECCCC-----------CEEEEEECCC--------------CCEEEEEECCCEEEEEECCCCCEEEEE--CCCCC-C
T ss_conf 278716666-----------4899998799--------------998999948894999998999788876--06777-7
Q ss_pred EEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC-CCCEEEEEECCCEEEEEEECCCCCC
Q ss_conf 669998554999719999928981999978999278998089975489996589-9998999807972999992498554
Q 000703 137 IQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPF-DARHFCVLGLKGLLLSVRVLGQKED 215 (1342)
Q Consensus 137 V~~l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i~~~~~~~~~i~~l~~~P~-d~~~la~~~~dg~i~~~d~~~~~~~ 215 (1342)
|.+++|+|++ .+|++++.|+.|++||+.+|+++..+..|...+.+++|+|. +...+++++.||.+.+||+.....
T Consensus 660 v~~~~~s~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~- 735 (1249)
T 3sfz_A 660 VLCCAFSSDD---SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC- 735 (1249)
T ss_dssp EEEEEECTTS---SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-
T ss_pred EEEEEEECCC---CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCH-
T ss_conf 8999992699---989998189959998779993689995899737999984089965999980897099998999634-
Q ss_pred CEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCC
Q ss_conf 30463589842751012355441026577899877675346999993688720999748849999846881258995389
Q 000703 216 EVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPR 295 (1342)
Q Consensus 216 ~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l~~ 295 (1342)
...+ ..+...+..++|+|+++.+++++.|+.|++||+.+++....+...+
T Consensus 736 ---~~~~---------------------------~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 785 (1249)
T 3sfz_A 736 ---RNTM---------------------------FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785 (1249)
T ss_dssp ---EEEE---------------------------CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCC
T ss_pred ---HHEE---------------------------CCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEECCCC
T ss_conf ---2201---------------------------2777978899992599989999789859999688886553020232
Q ss_pred C-----------CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCH
Q ss_conf 7-----------64418999859999799996798299997658944456740221224566667898628999705702
Q 000703 296 G-----------CAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSES 364 (1342)
Q Consensus 296 ~-----------~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~ 364 (1342)
. ...+..+.++||++.+++++ ++.|.+|+..++.....+... ....+..+.++++
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~-----------~~~~v~~~~~sp~-- 851 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTG-----------HHSTIQYCDFSPY-- 851 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECS-----------SSSCCCEEEECSS--
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCC-----------CCCCEEEEEECCC--
T ss_conf 10246776445650179999978998899975-895999995689723577478-----------7776079998278--
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45655310279999999764568988533432356752999997488099999124643544344343467864111234
Q 000703 365 TIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVAL 444 (1342)
Q Consensus 365 i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~ 444 (1342)
+..+++++.||.|.+|++..+...
T Consensus 852 ------------------------------------~~~l~~~~~dg~v~vwd~~~~~~~-------------------- 875 (1249)
T 3sfz_A 852 ------------------------------------DHLAVIALSQYCVELWNIDSRLKV-------------------- 875 (1249)
T ss_dssp ------------------------------------TTEEEEECSSSCEEEEETTTTEEE--------------------
T ss_pred ------------------------------------CCEEEEEECCCEEEEEECCCCCEE--------------------
T ss_conf ------------------------------------888999947986999986789565--------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 69654457686750020034211224688899999877665553148884301125766299996399721001269987
Q 000703 445 CGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNY 524 (1342)
Q Consensus 445 ~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~ 524 (1342)
..+.+|..+|++++|+|
T Consensus 876 --------------------------------------------------~~~~~h~~~v~~v~~sp------------- 892 (1249)
T 3sfz_A 876 --------------------------------------------------ADCRGHLSWVHGVMFSP------------- 892 (1249)
T ss_dssp --------------------------------------------------EEECCCSSCEEEEEECT-------------
T ss_pred --------------------------------------------------EECCCCCCCEEEEEECC-------------
T ss_conf --------------------------------------------------32278766568999989-------------
Q ss_pred CCCCCCEEEEEECCCCEEEEECCCCCE-----------------------------EE--------EEEECCCCEEEEEE
Q ss_conf 789998999992899199995899928-----------------------------89--------96332787479997
Q 000703 525 PAVAVPLVALGTQSGAVDVVDVSANAV-----------------------------TA--------SFSVHNGTVRGLRW 567 (1342)
Q Consensus 525 ~~~~~~llAsgs~dGtI~iWDl~tg~~-----------------------------~~--------~l~~H~~~V~~i~f 567 (1342)
++..+++++.||+|++||+.++.. .. ....+...+.+++|
T Consensus 893 ---dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 893 ---DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp ---TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred ---CCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEE
T ss_conf ---99989999589728988746652010211331036897599868998137762489844765089725672789999
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 59983899953876434573018799997679820014881268999969999968999899999899789996657861
Q 000703 568 LGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPI 647 (1342)
Q Consensus 568 s~~~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~ 647 (1342)
++++.++..+.. ++.+++||+.++. .+....+ |..+|+++.|+|+|++|++++.|+.|++||+ .++.
T Consensus 970 sp~g~~l~~g~~---------~g~i~i~d~~~~~--~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~-~~~~ 1036 (1249)
T 3sfz_A 970 SPHLEYVAFGDE---------DGAIKIIELPNNR--VFSSGVG-HKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTGD 1036 (1249)
T ss_dssp CTTSSEEEEEET---------TSCCEEEETTTTS--CEEECCC-CSSCCCCEEECSSSSCEEEECSSSBEEEEET-TTTE
T ss_pred CCCCCEEEEECC---------CCCEEEEECCCCC--EEEECCC-CCCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCC
T ss_conf 589977999869---------9988999757872--3443036-7771689999899998999869987999987-9996
Q ss_pred EEEECC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 133026--764899985999999999999976666557787755778666642378998677888867899985999956
Q 000703 648 MLRSLA--LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALA 725 (1342)
Q Consensus 648 ~l~~l~--~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~ 725 (1342)
...... ..++.+.|+++ ..+++++.
T Consensus 1037 ~~~~~~~~~~v~~~~~~~~-----------------------------------------------------~~l~~~~~ 1063 (1249)
T 3sfz_A 1037 YVFLQAHQETVKDFRLLQD-----------------------------------------------------SRLLSWSF 1063 (1249)
T ss_dssp EECCBCCSSCEEEEEECSS-----------------------------------------------------SEEEEEES
T ss_pred EEEEECCCCCEEEEEECCC-----------------------------------------------------CCEEEEEC
T ss_conf 6898527873899999089-----------------------------------------------------95899978
Q ss_pred CCCEEEEEECCCE-EECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EEEECCCCCCEEEEE
Q ss_conf 9979999934982-3126778899752355662999854--69999999679949999899996-243014666578999
Q 000703 726 NGALGVFEVHGRR-IRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SSQFSTHREGIRRIK 801 (1342)
Q Consensus 726 Dg~I~vwdv~g~~-i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iWDl~t~~-~~~l~~H~~~V~~I~ 801 (1342)
||++++|++.... ++. +.+|.+.|.+++| +++++++++.||+|++||+.++. ...+.+|.+.|.+++
T Consensus 1064 dg~v~vwd~~~~~~~~~---------~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~ 1134 (1249)
T 3sfz_A 1064 DGTVKVWNVITGRIERD---------FTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSA 1134 (1249)
T ss_dssp SSEEEEEETTTTCCCEE---------EECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCEEEE---------ECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEE
T ss_conf 89689988898865588---------746688489999989999899984999489987898500125506877679999
Q ss_pred EECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCC------CCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCC
Q ss_conf 9148999987787999988981999988988743323347------7779984899998079988999869999968992
Q 000703 802 FSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQ------PQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSS 875 (1342)
Q Consensus 802 FSP~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~------~h~~~~~V~~l~w~~~~~~~~~~l~L~sas~Dgs 875 (1342)
|+|+ + .+|++++.||+|++||+.+++.+. .+.. ...+...|.+++|+|+ +. +|++++ |+
T Consensus 1135 ~s~d--g----~~lat~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~v~~l~fs~d----g~--~l~s~~--g~ 1199 (1249)
T 3sfz_A 1135 FSLD--G----ILLATGDDNGEIRIWNVSDGQLLH-SCAPISVEEGTATHGGWVTDVCFSPD----SK--TLVSAG--GY 1199 (1249)
T ss_dssp ECSS--S----SEEEEEETTSCCCEEESSSSCCCC-CCCCCC-------CCSCCCEEEECTT----SS--CEEEES--SS
T ss_pred ECCC--C----CEEEEEECCCEEEEEECCCCCEEE-EECCCCCCCCCCCCCCEEEEEEECCC----CC--EEEECC--CE
T ss_conf 9799--9----989998289979999889994578-85144444210256742899999789----99--899779--85
Q ss_pred EEEEECCCCCCCC
Q ss_conf 9999714884002
Q 000703 876 FRLIEVNTSEKKI 888 (1342)
Q Consensus 876 IrvWdi~~~~~~~ 888 (1342)
|++||+..++...
T Consensus 1200 v~vwd~~~g~~~~ 1212 (1249)
T 3sfz_A 1200 LKWWNVATGDSSQ 1212 (1249)
T ss_dssp EEEBCSSSCBCCC
T ss_pred EEEEECCCCCEEE
T ss_conf 9998988895004
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=465.36 Aligned_cols=555 Identities=15% Similarity=0.161 Sum_probs=433.2
Q ss_pred CCCCCCCCEEECCCC-EEEEECCCEEEEEECCCC----CEEEEECCCCCCCCCCCCCCCCC-EEEEEEEC--CCCCCCCC
Q ss_conf 989997725727999-299972994999959996----43575269988998977778996-99999802--89765657
Q 000703 22 PSRNNFGSADLSPSG-LLAFASGSSISILDSRSL----QLISTIPIPPPTSAGSVASLSPF-VTAVKWIP--ITLRCDLL 93 (1342)
Q Consensus 22 ~~~~~~~a~~~s~~g-llA~g~~~~V~i~d~~s~----~~~~~l~~H~~~~~~~~~~~~~~-Vt~v~fsp--~~~~~~~~ 93 (1342)
.|+..+.+++|+|+| ++|+++++.|.|||..++ +.+..+.+|.. . |++++|+| +
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~-----------~~v~~~~~sp~~~------- 77 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGS-----------SVVTTVKFSPIKG------- 77 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTT-----------SCEEEEEECSSTT-------
T ss_pred CCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEECCCC-----------CEEEEEEECCCCC-------
T ss_conf 7658536899889999799935984999977788776514318805788-----------4499999796789-------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCC--------EEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECC----CEE
Q ss_conf 7889999869999949996999848999--------3999964899999986699985549997199999289----819
Q 000703 94 STEPGSSHLLLAAADRHGRVALLDFRLR--------SVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGP----SVL 161 (1342)
Q Consensus 94 s~~~~~~g~~LASg~~dG~V~IWDv~tg--------~~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~~d----~~i 161 (1342)
+.+||+|+.||.|+|||+.++ .....+ ..|.. +|.+++|+|++ ++|++++.+ +.|
T Consensus 78 -------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~--~~~~~-~v~~~~~s~~~---~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 78 -------SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF--QVLAG-PISDISWDFEG---RRLCVVGEGRDNFGVF 144 (615)
T ss_dssp -------CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE--ECCSS-CEEEEEECTTS---SEEEEEECCSSCSEEE
T ss_pred -------CCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHH--HCCCC-CEEEEEEECCC---CEEEEECCCCCCCCEE
T ss_conf -------98899964898799976888765544554200011--12566-37999990799---9899931687775579
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCCCC-EEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 99978999278998089975489996589999-89998079729999924985543046358984275101235544102
Q 000703 162 SLYNTTSASCMWKYDASPEYLSCIRRNPFDAR-HFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSA 240 (1342)
Q Consensus 162 ~lWd~~tG~~i~~~~~~~~~i~~l~~~P~d~~-~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~ 240 (1342)
.+|| +++.+..+..|...+.+++|+| ++. .+++++.||.+.+||..... ....+.
T Consensus 145 ~~~d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~----~~~~~~----------------- 200 (615)
T 1pgu_A 145 ISWD--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFK----FSASDR----------------- 200 (615)
T ss_dssp EETT--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBE----EEEEEC-----------------
T ss_pred EEEE--CCCCCEEEECCCCCEEEEEECC-CCCCEEEEEECCCCEEEEECCCCC----EEEEEC-----------------
T ss_conf 9997--8981031306774388999887-899689999579959999699961----013202-----------------
Q ss_pred CCCCCCCCCCCCCC---CEEEEEECCC-CCCEEEEECCCEEEEEECCCCCEEEEEECC--CCCCCEEEEEECCCCCEEEE
Q ss_conf 65778998776753---4699999368-872099974884999984688125899538--97644189998599997999
Q 000703 241 GAASLSPASGLFPL---YMVKFTFSPH-WRHIIFVTFPRELVVFDLQYETPLFSAALP--RGCAKFLDVLADPNNDLLYC 314 (1342)
Q Consensus 241 ~~~~~~p~~~~~~~---~~~~~~FSpd-g~~ll~~~~d~~I~iwDl~t~~~l~~~~l~--~~~~~~~~v~~~pdg~~L~s 314 (1342)
.+.. .+..++|+|+ ++.+++++.|+.|++||+++++.+..+... .+..++..+.++ ++..|++
T Consensus 201 ----------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 201 ----------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp ----------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred ----------CCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CCCEEEE
T ss_conf ----------56777742899997897788899986898089998999978589525444567755899981-8997999
Q ss_pred EECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96798299997658944456740221224566667898628999705702456553102799999997645689885334
Q 000703 315 AHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSD 394 (1342)
Q Consensus 315 ~s~DgtI~lW~~~~g~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 394 (1342)
++.||+|++|+.+++.....+..... + . ...+....+.
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~--~-----~-~~~~~~~~~~---------------------------------- 307 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQ--Q-----L-GNQQVGVVAT---------------------------------- 307 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTT--C-----G-GGCEEEEEEE----------------------------------
T ss_pred ECCCCCEEEEECCCCCEEEEECCCCC--C-----C-CCCEEEEEEC----------------------------------
T ss_conf 84899489997888927878847877--5-----4-5714699918----------------------------------
Q ss_pred CCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 32356752999997488099999124643544344343467864111234696544576867500200342112246888
Q 000703 395 DTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSR 474 (1342)
Q Consensus 395 ~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 474 (1342)
++..+++++.||.|.+|++..+...
T Consensus 308 -----~~~~l~~~~~~g~i~~~d~~~~~~~-------------------------------------------------- 332 (615)
T 1pgu_A 308 -----GNGRIISLSLDGTLNFYELGHDEVL-------------------------------------------------- 332 (615)
T ss_dssp -----ETTEEEEEETTSCEEEEETTEEEEE--------------------------------------------------
T ss_pred -----CCCEEEEEECCCCEEEEECCCCCEE--------------------------------------------------
T ss_conf -----9976999978997899988899288--------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE
Q ss_conf 99999877665553148884301125766299996399721001269987789998999992899199995899928899
Q 000703 475 NRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTAS 554 (1342)
Q Consensus 475 ~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg~~~~~ 554 (1342)
..+.+|..+|+++++ | + +++++.||.|++||+. ...
T Consensus 333 --------------------~~~~~~~~~v~~~~~-~----------------~---l~~~~~dg~i~~w~~~---~~~- 368 (615)
T 1pgu_A 333 --------------------KTISGHNKGITALTV-N----------------P---LISGSYDGRIMEWSSS---SMH- 368 (615)
T ss_dssp --------------------EEECCCSSCEEEEET-T----------------T---TEEEETTSCEEETTTT---EEE-
T ss_pred --------------------EEEECCCCCEEEEEE-C----------------C---CEEECCCCEEEEEECH---HHC-
T ss_conf --------------------999477787899995-6----------------7---4898799959998752---415-
Q ss_pred EEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 63327874799975998389995387643457301879999767982001488126899996999996899989999989
Q 000703 555 FSVHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRD 634 (1342)
Q Consensus 555 l~~H~~~V~~i~fs~~~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D 634 (1342)
..|...|.++.|.++..+++.+.+ +.+++||+.++. ....+.+++++|+|++++++ .+
T Consensus 369 -~~~~~~v~~~~~~~~~~l~~~~~d----------~~i~~~~~~~~~----------~~~~~~~~~~s~~~~~~~~~-~~ 426 (615)
T 1pgu_A 369 -QDHSNLIVSLDNSKAQEYSSISWD----------DTLKVNGITKHE----------FGSQPKVASANNDGFTAVLT-ND 426 (615)
T ss_dssp -CCCCSCEEEEECCSTTCCEEEETT----------TEEEETTEEEEE----------CSSCEEEEEECSSSEEEEEE-TT
T ss_pred -CCCCCCEEEEEECCCCEEEEEECC----------CCEEEEECCCCC----------CCCCCEEEEECCCCCEEEEE-CC
T ss_conf -755685179997898679999589----------979998866676----------36784699982898789996-79
Q ss_pred CCEEEEECCCCCCEEEECC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9789996657861133026--76489998599999999999997666655778775577866664237899867788886
Q 000703 635 APVEVWAMTKNPIMLRSLA--LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGS 712 (1342)
Q Consensus 635 ~~I~iWdl~kt~~~l~~l~--~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~s 712 (1342)
+.+++|++ .++..++.+. .+++.++|+
T Consensus 427 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 455 (615)
T 1pgu_A 427 DDLLILQS-FTGDIIKSVRLNSPGSAVSLS-------------------------------------------------- 455 (615)
T ss_dssp SEEEEEET-TTCCEEEEEECSSCEEEEEEC--------------------------------------------------
T ss_pred CCEEEEEC-CCCCEEEECCCCCCCEEEEEC--------------------------------------------------
T ss_conf 82699944-678665551567872077883--------------------------------------------------
Q ss_pred CCCCCCEEEEEEC-CCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EE
Q ss_conf 7899985999956-99799999349823126778899752355662999854--69999999679949999899996-24
Q 000703 713 QDDTSESFAFALA-NGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SS 788 (1342)
Q Consensus 713 ~~~~~e~la~~~~-Dg~I~vwdv~g~~i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iWDl~t~~-~~ 788 (1342)
++.++++.. ||.+++|++....+.. . .+.+|...|++++| ++++|++|+.||.|++||+.+++ ..
T Consensus 456 ----~~~l~~~~~~d~~i~~~~~~~~~~~~--~-----~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 456 ----QNYVAVGLEEGNTIQVFKLSDLEVSF--D-----LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT 524 (615)
T ss_dssp ----SSEEEEEETTTSCEEEEETTEEEEEE--E-----CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ----CCEEEEEECCCCEEEEEECCCCCCCC--C-----CCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCEE
T ss_conf ----88899965689869999888854353--3-----367765750799998999989981799859986577776246
Q ss_pred EECC-CCCCEEEEEEEC----------CCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 3014-666578999914----------89999877879999889819999889887433233477779984899998079
Q 000703 789 QFST-HREGIRRIKFSP----------VVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPT 857 (1342)
Q Consensus 789 ~l~~-H~~~V~~I~FSP----------~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~~h~~~~~V~~l~w~~~ 857 (1342)
.+.+ |...|++++|+| + + .+|++++.|++|++||+.++......+ .+|. ..|.+++|+|+
T Consensus 525 ~~~~~h~~~v~~~~~sp~~~~~~~~~~~--~----~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~h~--~~v~~l~~s~~ 595 (615)
T 1pgu_A 525 SRWAFRTSKINAISWKPAEKGANEEEIE--E----DLVATGSLDTNIFIYSVKRPMKIIKAL-NAHK--DGVNNLLWETP 595 (615)
T ss_dssp CCSCCCSSCEEEEEECCCC------CCS--C----CEEEEEETTSCEEEEESSCTTCCEEET-TSST--TCEEEEEEEET
T ss_pred EEECCCCCCEEEEEECCCCCCCCCCCCC--C----CEEEEECCCCCEEEEECCCCCEECHHH-HCCC--CCEEEEEECCC
T ss_conf 7604788714699976832345332468--8----889998179719999778885403113-3594--30589997389
Q ss_pred CCCCCCCEEEEEEECCCCEEEEECCC
Q ss_conf 98899986999996899299997148
Q 000703 858 RTDKNDPLVLCIAGADSSFRLIEVNT 883 (1342)
Q Consensus 858 ~~~~~~~l~L~sas~DgsIrvWdi~~ 883 (1342)
+. |++++.||+|++|++.+
T Consensus 596 ----~~---l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 596 ----ST---LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ----TE---EEEEETTSCEEEEEEC-
T ss_pred ----CC---EEEECCCCEEEEEEEEC
T ss_conf ----97---28845996399996015
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=458.98 Aligned_cols=554 Identities=14% Similarity=0.125 Sum_probs=400.8
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEE
Q ss_conf 69999980289765657788999986999994999699984899939999648999999866999855499971999992
Q 000703 77 FVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAIN 156 (1342)
Q Consensus 77 ~Vt~v~fsp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~ 156 (1342)
.+++|+|+|+ |.+||+++ ++.|+|||+.++.....+ .+|.. +|.+++|+|++ ++||+++
T Consensus 20 ~~~~~~~spd--------------g~~l~~~~-~~~v~l~~~~~~~~~~~~--~~h~~-~v~~~~~spdg---~~lasg~ 78 (611)
T 1nr0_A 20 TAVVLGNTPA--------------GDKIQYCN-GTSVYTVPVGSLTDTEIY--TEHSH-QTTVAKTSPSG---YYCASGD 78 (611)
T ss_dssp CCCCCEECTT--------------SSEEEEEE-TTEEEEEETTCSSCCEEE--CCCSS-CEEEEEECTTS---SEEEEEE
T ss_pred CEEEEEECCC--------------CCEEEECC-CCEEEEECCCCCCCCEEE--CCCCC-CEEEEEECCCC---CEEEEEE
T ss_conf 2369766799--------------99799679-997999457872427376--58998-65999999999---6899994
Q ss_pred CCCEEEEEECCCCE--EEEEEECCCCCEEEEEECCCCCCEEEEEECC----CEEEEEEECCCCCCCEEEEEEEEECCCCH
Q ss_conf 89819999789992--7899808997548999658999989998079----72999992498554304635898427510
Q 000703 157 GPSVLSLYNTTSAS--CMWKYDASPEYLSCIRRNPFDARHFCVLGLK----GLLLSVRVLGQKEDEVVVKELQIQTDCTE 230 (1342)
Q Consensus 157 ~d~~i~lWd~~tG~--~i~~~~~~~~~i~~l~~~P~d~~~la~~~~d----g~i~~~d~~~~~~~~~~~k~~~i~~~~~~ 230 (1342)
.|++|++||+.+++ ....+..|...+.+++|+| |++.+++++.+ +.+.+||. +. . ..
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~-~~-~----~~---------- 141 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDT-GT-S----NG---------- 141 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTT-CC-B----CB----------
T ss_pred CCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECC-CCCEEEEEECCCCCEEEEEEEEC-CC-C----CC----------
T ss_conf 89978994898984156676225578448999899-99979999899773669999638-99-7----63----------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC-EEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCC
Q ss_conf 1235544102657789987767534699999368872-099974884999984688125899538976441899985999
Q 000703 231 LLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRH-IIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNN 309 (1342)
Q Consensus 231 l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~FSpdg~~-ll~~~~d~~I~iwDl~t~~~l~~~~l~~~~~~~~~v~~~pdg 309 (1342)
. ...+...+..++|+|+++. +++++.|++|++||.+.++.+.++. ++...+..+.++||+
T Consensus 142 --~---------------l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~--~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 142 --N---------------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG--EHTKFVHSVRYNPDG 202 (611)
T ss_dssp --C---------------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC--CCSSCEEEEEECTTS
T ss_pred --E---------------ECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEEC--CCCCCEEEEEECCCC
T ss_conf --2---------------547889836999889998299999289809999799975766520--025716999997999
Q ss_pred CEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 97999967982999976589444567402212245666678986289997057024565531027999999976456898
Q 000703 310 DLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSP 389 (1342)
Q Consensus 310 ~~L~s~s~DgtI~lW~~~~g~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~ 389 (1342)
+.|++++.|++|++|+.+++++...+.. .. ....+ ....|..+.++|+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~-~~-~~~~~---h~~~V~~v~~spd--------------------------- 250 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFED-DS-LKNVA---HSGSVFGLTWSPD--------------------------- 250 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBC-TT-SSSCS---SSSCEEEEEECTT---------------------------
T ss_pred CEEEEEECCCCEEEEECCCCCEEEEECC-CC-CCCCC---CCCCEEEEEECCC---------------------------
T ss_conf 9899998999199988999828665136-64-32356---6787899999799---------------------------
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 85334323567529999974880999991246435443443434678641112346965445768675002003421122
Q 000703 390 FEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEH 469 (1342)
Q Consensus 390 ~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~ 469 (1342)
++.|++++.||.|++||+.++....+.+ .
T Consensus 251 -----------g~~l~s~s~D~~v~lWd~~~~~~~~~~~---------------------~------------------- 279 (611)
T 1nr0_A 251 -----------GTKIASASADKTIKIWNVATLKVEKTIP---------------------V------------------- 279 (611)
T ss_dssp -----------SSEEEEEETTSEEEEEETTTTEEEEEEE---------------------C-------------------
T ss_pred -----------CCEEEEEECCCEEEEEECCCCCEEEEEC---------------------C-------------------
T ss_conf -----------9999999089809999688870134404---------------------7-------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 46888999998776655531488843011257662999963997210012699877899989999928991999958999
Q 000703 470 VNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSAN 549 (1342)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg 549 (1342)
+ ..+...+..+.+. +..+++++.||+|++||..++
T Consensus 280 -------------------------~--~~~~~~~~~~~~~------------------~~~l~s~s~d~~i~~~~~~~~ 314 (611)
T 1nr0_A 280 -------------------------G--TRIEDQQLGIIWT------------------KQALVSISANGFINFVNPELG 314 (611)
T ss_dssp -------------------------C--SSGGGCEEEEEEC------------------SSCEEEEETTCCEEEEETTTT
T ss_pred -------------------------C--CCCCCEEEEEEEC------------------CCEEEEEECCCCEEEEECCCC
T ss_conf -------------------------8--8766406899973------------------887999958996899968899
Q ss_pred CEEEEEEECCCCEEEEEECCCCCEE-EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEE
Q ss_conf 2889963327874799975998389-995387643457301879999767982001488126899996999996899989
Q 000703 550 AVTASFSVHNGTVRGLRWLGNSRLV-SFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYL 628 (1342)
Q Consensus 550 ~~~~~l~~H~~~V~~i~fs~~~~li-S~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~~~~I~~i~~Spdg~~L 628 (1342)
.+...+.+|...|++++|+++++.+ +.+. ++.|++||+.++.. .+.....|...|.++.|++++ .+
T Consensus 315 ~~~~~~~gh~~~v~~l~~spdg~~l~s~s~----------D~~v~~Wd~~~~~~--~~~~~~~h~~~v~~~~~s~~~-~l 381 (611)
T 1nr0_A 315 SIDQVRYGHNKAITALSSSADGKTLFSADA----------EGHINSWDISTGIS--NRVFPDVHATMITGIKTTSKG-DL 381 (611)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEET----------TSCEEEEETTTCCE--EECSSCSCSSCEEEEEECTTS-CE
T ss_pred CCCEEECCCCCCEEEEEEECCCCEEEEEEC----------CCCEEEEECCCCCE--EEECCCCCCCEEEEEEECCCC-CE
T ss_conf 744698378888899999189998999958----------98499997887925--632166776507899987899-69
Q ss_pred EEEECCCCEEEEECCCCCCEEE------ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999899789996657861133------0267648999859999999999999766665577877557786666423789
Q 000703 629 LILFRDAPVEVWAMTKNPIMLR------SLALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSS 702 (1342)
Q Consensus 629 as~s~D~~I~iWdl~kt~~~l~------~l~~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (1342)
++++.|+++++|++ ..+.+.. .+......+.++|+
T Consensus 382 ~s~s~d~~v~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~s~d-------------------------------------- 422 (611)
T 1nr0_A 382 FTVSWDDHLKVVPA-GGSGVDSSKAVANKLSSQPLGLAVSAD-------------------------------------- 422 (611)
T ss_dssp EEEETTTEEEEECS-SSSSSCTTSCCEEECSSCEEEEEECTT--------------------------------------
T ss_pred EEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCEEEEECC--------------------------------------
T ss_conf 99984896689546-885435652120014899707998079--------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEE
Q ss_conf 9867788886789998599995699799999349823126778899752355662999854--69999999679949999
Q 000703 703 DSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWW 780 (1342)
Q Consensus 703 ~~~~~~s~~s~~~~~e~la~~~~Dg~I~vwdv~g~~i~d~~~~~~~~~~~~~~~~V~~ia~--dg~~Lvsgs~DG~I~iW 780 (1342)
++.++.+ .++.+++|+ .+. +... .+...+.+++| ||++|++|+.||+|++|
T Consensus 423 --------------g~~~~~~-~~~~v~~~~-~~~-~~~~----------~~~~~v~~va~spdg~~lasgs~D~~v~lw 475 (611)
T 1nr0_A 423 --------------GDIAVAA-CYKHIAIYS-HGK-LTEV----------PISYNSSCVALSNDKQFVAVGGQDSKVHVY 475 (611)
T ss_dssp --------------SSCEEEE-ESSEEEEEE-TTE-EEEE----------ECSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred --------------CCEEEEE-ECCEEEEEE-CCC-EEEE----------ECCCCCEEEEEECCCCEEEEECCCCEEEEE
T ss_conf --------------9699999-676399984-894-3464----------068895499992899899996899739999
Q ss_pred ECCCCCEE--EECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCC-CCCCCCC-CCCCCCCCCCEEEEEEEC
Q ss_conf 89999624--3014666578999914899998778799998898199998898-8743323-347777998489999807
Q 000703 781 DVTTGHSS--QFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDS-QDPLANS-LLQPQFPGTLVLELDWLP 856 (1342)
Q Consensus 781 Dl~t~~~~--~l~~H~~~V~~I~FSP~~~g~~~~~~Las~s~DgtI~IWDl~t-~~~l~~~-l~~~h~~~~~V~~l~w~~ 856 (1342)
|+.++... ...+|...|.+|+|+|+ + ++|++++.|++|++||+.+ ++ +... +..+|. ..|.+++|+|
T Consensus 476 d~~~~~~~~~~~~~h~~~v~~v~fspd--g----~~las~s~d~~v~~w~~~~~~~-~~~~~~~~~H~--~~V~~v~fsp 546 (611)
T 1nr0_A 476 KLSGASVSEVKTIVHPAEITSVAFSNN--G----AFLVATDQSRKVIPYSVANNFE-LAHTNSWTFHT--AKVACVSWSP 546 (611)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEECTT--S----SEEEEEETTSCEEEEEGGGTTE-ESCCCCCCCCS--SCEEEEEECT
T ss_pred ECCCCCEEEEECCCCCCCEEEEEECCC--C----CEEEEECCCCCEEEEECCCCCC-EEEEEEEEECC--CCEEEEEECC
T ss_conf 945992224101577886079999899--9----9899994899899988577872-23210264046--6425899899
Q ss_pred CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 99889998699999689929999714884002434442000012568986664003530
Q 000703 857 TRTDKNDPLVLCIAGADSSFRLIEVNTSEKKIGYTSQSRAIKERFRPMPLCLPILLPTS 915 (1342)
Q Consensus 857 ~~~~~~~~l~L~sas~DgsIrvWdi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 915 (1342)
+ ++ +|++++.|++||+|++....... ......+....+.+.++.|.+
T Consensus 547 d----g~--~lasgs~D~~v~lW~~~~~~~~~------~~~~~~h~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 547 D----NV--RLATGSLDNSVIVWNMNKPSDHP------IIIKGAHAMSSVNSVIWLNET 593 (611)
T ss_dssp T----SS--EEEEEETTSCEEEEETTCTTSCC------EEETTSSTTSCEEEEEEEETT
T ss_pred C----CC--EEEEEECCCCEEEEECCCCCCCC------CHHHCCCCCCCEEEEEECCCC
T ss_conf 8----99--79999799729999788755563------264446765671189985899
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=435.20 Aligned_cols=610 Identities=13% Similarity=0.114 Sum_probs=387.8
Q ss_pred CCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 89997725727999-299972-9949999599964357526998899897777899699999802897656577889999
Q 000703 23 SRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSS 100 (1342)
Q Consensus 23 ~~~~~~a~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s~~~~~~ 100 (1342)
|...+.+++|+|+| +||.|+ ++.|+|||....+....+. |.. .|++++|+| +
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~-----------~V~~l~fsp-g------------- 69 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRS-----------AIKEMRFVK-G------------- 69 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCC-----------CEEEEEEET-T-------------
T ss_pred CCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECC-CCC-----------CEEEEEECC-C-------------
T ss_conf 89984899997999989999297989999689947999868-999-----------779999908-9-------------
Q ss_pred CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEE-EE-----
Q ss_conf 869999949996999848999399996489999998669998554999719999928981999978999278-99-----
Q 000703 101 HLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCM-WK----- 174 (1342)
Q Consensus 101 g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~V~~l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i-~~----- 174 (1342)
.+|||++.|++|+|||+.+++.+..+. |.. .|.+++|+|++ .+|++++.|+.|++||+.++.+. ++
T Consensus 70 -~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~-~V~~v~~sp~g---~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 70 -IYLVVINAKDTVYVLSLYSQKVLTTVF---VPG-KITSIDTDASL---DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp -TEEEEEETTCEEEEEETTTCSEEEEEE---CSS-CEEEEECCTTC---SEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred -CEEEEEECCCEEEEEECCCCCEEEEEC---CCC-CEEEEEECCCC---CEEEEECCCCCEEEEECCCCCCCCCEECCCC
T ss_conf -889999895959999899996899974---899-87999987999---9899994999299999999962650304321
Q ss_pred -----EECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf -----808997548999658999989998079729999924985543046358984275101235544102657789987
Q 000703 175 -----YDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPAS 249 (1342)
Q Consensus 175 -----~~~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~ 249 (1342)
..+|...+.+++|+|.+...+++++.||.+ +||+..... .+.+......+... .... ....
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~---~~~~------~~~~ 207 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPFAPG---GDFS------EKTN 207 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTTCCC---STTC------CCTT
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCE-EEECCCCCE----EEEEECCCCCCCCC---CCCC------CCCC
T ss_conf 00025445789738999766999989999189849-998778965----79983355776777---6544------3323
Q ss_pred CCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEEC-----CC-----------CCCCEEEEEEC----CCC
Q ss_conf 76753469999936887209997488499998468812589953-----89-----------76441899985----999
Q 000703 250 GLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAAL-----PR-----------GCAKFLDVLAD----PNN 309 (1342)
Q Consensus 250 ~~~~~~~~~~~FSpdg~~ll~~~~d~~I~iwDl~t~~~l~~~~l-----~~-----------~~~~~~~v~~~----pdg 309 (1342)
..+...+.+++|+|+++.+++++.|+.|++||+++++.+....+ +. +..++..+.++ ||+
T Consensus 208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~ 287 (902)
T 2oaj_A 208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEY 287 (902)
T ss_dssp SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
T ss_conf 45677768999859999999998999399998789968888850123457877767888855567745799973499988
Q ss_pred -CEEEEEECC-----CCEEEEECC-CC-----------------CEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHH
Q ss_conf -979999679-----829999765-89-----------------444567402212245666678986289997057024
Q 000703 310 -DLLYCAHLD-----GKLSIWRRK-EG-----------------EQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSEST 365 (1342)
Q Consensus 310 -~~L~s~s~D-----gtI~lW~~~-~g-----------------~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i 365 (1342)
..|++++.| +++.+|+.. +. .....+ +. ..+..+....+.+..+
T Consensus 288 ~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-------~~----~~~~~v~~~~~~~~~s- 355 (902)
T 2oaj_A 288 TSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIF-------PL----PTNVPIVNILPIPRQS- 355 (902)
T ss_dssp EEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEE-------CC----SSSSCEEEEEECCSSC-
T ss_pred CEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEE-------EC----CCCCCEEEEEECCCCC-
T ss_conf 78999688777788852899954789875554255654664174522787-------41----8999547999977889-
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCC-CC-CCCCCCCCCCCCCCC
Q ss_conf 5655310279999999764568988533432356752999997488099999124643544-34-434346786411123
Q 000703 366 IQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDL-QK-DAIKSGMDADVIDVA 443 (1342)
Q Consensus 366 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~-~~-~~~~~g~~~~~~~~~ 443 (1342)
| .+. . ..++..+++++.||.|++|++.++..... .. .....++.+.+..++
T Consensus 356 -----------------------p-~~~-g--~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~ 408 (902)
T 2oaj_A 356 -----------------------P-YFA-G--CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM 408 (902)
T ss_dssp -----------------------S-HHH-H--TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred -----------------------C-CCC-C--CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf -----------------------8-867-7--878506999917984899978999855655568985223589724899
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 46965445768675002003421122468889999987766555314888430112576629999639972100126998
Q 000703 444 LCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGN 523 (1342)
Q Consensus 444 ~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~ 523 (1342)
|...+ . ..|...... ....+ ..+.||...+.+++|+|
T Consensus 409 ~s~~~----------------~--~~w~~~~~~---------~~~~~----~~l~G~~~~v~sv~~sp------------ 445 (902)
T 2oaj_A 409 AASVP----------------N--KLWLGALSA---------AQNKD----YLLKGGVRTKRQKLPAE------------ 445 (902)
T ss_dssp EEEEE----------------H--HHHHHHHHT---------TBCCC----CSCCCSBCCCCCCCCCS------------
T ss_pred EEECC----------------H--HHHHHHHHC---------CCCCC----CCCCCCCCCCCCCCCCC------------
T ss_conf 99749----------------9--999888860---------46999----75457857787533366------------
Q ss_pred CCCCCCCEEEEEECCCCEEEEECCCCCEE--E--E--EE-----ECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEE
Q ss_conf 77899989999928991999958999288--9--9--63-----327874799975998389995387643457301879
Q 000703 524 YPAVAVPLVALGTQSGAVDVVDVSANAVT--A--S--FS-----VHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRL 592 (1342)
Q Consensus 524 ~~~~~~~llAsgs~dGtI~iWDl~tg~~~--~--~--l~-----~H~~~V~~i~fs~~~~liS~S~~~~~~~~g~~~n~I 592 (1342)
+++++|+|+.||+|++||+.++.+. . . +. +|...|.+++|++++++++.+. .+++|
T Consensus 446 ----dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs---------~DgtV 512 (902)
T 2oaj_A 446 ----YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSI---------ETGDV 512 (902)
T ss_dssp ----EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEE---------TTSCE
T ss_pred ----CCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEECCCCCEEEEEE---------CCCEE
T ss_conf ----67589996589838999787764567736775015413778887646999638999699994---------58579
Q ss_pred EEEECCCCCE-------------------------------------------EEEEEECCCCCCCEEEEEECCCCCEEE
Q ss_conf 9997679820-------------------------------------------014881268999969999968999899
Q 000703 593 VVTCLRSGIN-------------------------------------------RAFRVLQKPERAPIRALRASSSGRYLL 629 (1342)
Q Consensus 593 ~iwDl~tG~~-------------------------------------------~~l~~l~~~~~~~I~~i~~Spdg~~La 629 (1342)
+|||+.+++. .++..+.+ |..+|++++||||| +||
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V~svafSpdG-~lA 590 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKTSAINNSNIG-FVG 590 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSEEEEEECBTS-EEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCCEEEEEECCCC-EEE
T ss_conf 9999248655575455778665113455134679654322423689887776014699986-88867799964876-899
Q ss_pred EEECCCCEEEEECCCCCCEEE-----ECC----CCEEEEEEC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999899789996657861133-----026----764899985-----999999999999976666557787755778666
Q 000703 630 ILFRDAPVEVWAMTKNPIMLR-----SLA----LPFTVLEWT-----LPTVPWPSQTGPSRQSSLSSKDHKADTTDGVST 695 (1342)
Q Consensus 630 s~s~D~~I~iWdl~kt~~~l~-----~l~----~~vt~l~ws-----p~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~ 695 (1342)
+++.|++|++||+ +++.++. .+. ..+++++|+ ||+
T Consensus 591 sgs~D~tv~lwd~-~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg------------------------------ 639 (902)
T 2oaj_A 591 IAYAAGSLMLIDR-RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG------------------------------ 639 (902)
T ss_dssp EEETTSEEEEEET-TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS------------------------------
T ss_pred EEECCCCEEEEEC-CCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCC------------------------------
T ss_conf 9958976999988-898399970246726466661399999998417898------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE----CCCEEECCCCCCCCCCCCCCCCEEEEEE-EC------
Q ss_conf 642378998677888867899985999956997999993----4982312677889975235566299985-46------
Q 000703 696 PTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEV----HGRRIRDFRPKWPSSSFISSDGLITAMA-YR------ 764 (1342)
Q Consensus 696 ~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~I~vwdv----~g~~i~d~~~~~~~~~~~~~~~~V~~ia-~d------ 764 (1342)
+.+..+++++.|++|++|++ .|+....+. +.....+.+.|..++ |+
T Consensus 640 -------------------~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~~ 696 (902)
T 2oaj_A 640 -------------------YSSILMVCGTDMGEVITYKILPASGGKFDVQLM----DITNVTSKGPIHKIDAFSKETKSS 696 (902)
T ss_dssp -------------------SEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE----EEEECCSSCCCCEEEEEETTTCCB
T ss_pred -------------------CCCEEEEEEECCCCEEEEEEECCCCCCEEEEEC----CCEECCCCCCEEEEEEEECCCCCC
T ss_conf -------------------763389999568739999995589986899966----724407889647998586687973
Q ss_pred ----------------CCEEEEEECCCCEEEEECCCCC-EEEECCCCCCEEEE---E------EECCCCCCCCCCEEEEE
Q ss_conf ----------------9999999679949999899996-24301466657899---9------91489999877879999
Q 000703 765 ----------------LPHVVMGDRSGNIRWWDVTTGH-SSQFSTHREGIRRI---K------FSPVVPGDRSRGRIAVL 818 (1342)
Q Consensus 765 ----------------g~~Lvsgs~DG~I~iWDl~t~~-~~~l~~H~~~V~~I---~------FSP~~~g~~~~~~Las~ 818 (1342)
.+..+....+..||+|++.+++ .+....|...+.++ . |+++ + ..|+++
T Consensus 697 ~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~--~----~~l~~~ 770 (902)
T 2oaj_A 697 CLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKN--L----TVIITL 770 (902)
T ss_dssp CBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEE--E----EEEEEE
T ss_pred CCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCC--C----EEEEEE
T ss_conf 6688789725577887773999993540599967533512367256201447778870135554467--3----699999
Q ss_pred ECCCEEEEEECCCCCCCCC
Q ss_conf 8898199998898874332
Q 000703 819 FHDNTFSVFDLDSQDPLAN 837 (1342)
Q Consensus 819 s~DgtI~IWDl~t~~~l~~ 837 (1342)
+.||+|++|++.+.+++..
T Consensus 771 ~~~g~i~~~s~p~l~~~~~ 789 (902)
T 2oaj_A 771 EINGHLRVFTIPDFKEQMS 789 (902)
T ss_dssp ETTSEEEEEETTTCCEEEE
T ss_pred ECCCCEEEEECCCHHHHHH
T ss_conf 2799599997856477841
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=421.78 Aligned_cols=648 Identities=13% Similarity=0.094 Sum_probs=385.8
Q ss_pred ECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEE
Q ss_conf 26998899897777899699999802897656577889999869999949996999848999399996489999998669
Q 000703 60 IPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQD 139 (1342)
Q Consensus 60 l~~H~~~~~~~~~~~~~~Vt~v~fsp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~h~~~~V~~ 139 (1342)
..+|+. .|++++|+|+ +.+||+|+.||+|+|||...++....+ .|.. +|.+
T Consensus 13 ~~gh~~-----------~V~~lafspd--------------g~~lAsgs~Dg~I~lw~~~~~~~~~~~---~~~~-~V~~ 63 (902)
T 2oaj_A 13 KYGMSS-----------KPIAAAFDFT--------------QNLLAIATVTGEVHIYGQQQVEVVIKL---EDRS-AIKE 63 (902)
T ss_dssp EEECSS-----------CEEEEEEETT--------------TTEEEEEETTSEEEEECSTTCEEEEEC---SSCC-CEEE
T ss_pred CCCCCC-----------CCEEEEECCC--------------CCEEEEEECCCEEEEEECCCCEEEEEC---CCCC-CEEE
T ss_conf 168899-----------8489999799--------------998999929798999968994799986---8999-7799
Q ss_pred EEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEE
Q ss_conf 99855499971999992898199997899927899808997548999658999989998079729999924985543046
Q 000703 140 LCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVV 219 (1342)
Q Consensus 140 l~wsp~~~~~~~Las~~~d~~i~lWd~~tG~~i~~~~~~~~~i~~l~~~P~d~~~la~~~~dg~i~~~d~~~~~~~~~~~ 219 (1342)
++|+| + ++|++++.|+.|++||+.+++++..+.. +..+++++|+| ++..+++++.||.|++||+.... .
T Consensus 64 l~fsp-g---~~L~S~s~D~~v~lWd~~~~~~~~~~~~-~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~-----~ 132 (902)
T 2oaj_A 64 MRFVK-G---IYLVVINAKDTVYVLSLYSQKVLTTVFV-PGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQ-----L 132 (902)
T ss_dssp EEEET-T---TEEEEEETTCEEEEEETTTCSEEEEEEC-SSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTE-----E
T ss_pred EEECC-C---CEEEEEECCCEEEEEECCCCCEEEEECC-CCCEEEEEECC-CCCEEEEECCCCCEEEEECCCCC-----C
T ss_conf 99908-9---8899998959599998999968999748-99879999879-99989999499929999999996-----2
Q ss_pred EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC-CCEEEEECCCEEEEEECCCCCEEEEEECC----
Q ss_conf 3589842751012355441026577899877675346999993688-72099974884999984688125899538----
Q 000703 220 KELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHW-RHIIFVTFPRELVVFDLQYETPLFSAALP---- 294 (1342)
Q Consensus 220 k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~FSpdg-~~ll~~~~d~~I~iwDl~t~~~l~~~~l~---- 294 (1342)
..+.+. .+..... . ...+...+.+++|+|++ ..++++..|+.| +||+++++.+..+..+
T Consensus 133 ~~~~i~----~~~~~~~---~--------~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g 196 (902)
T 2oaj_A 133 SSFKLD----NLQKSSF---F--------PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPF 196 (902)
T ss_dssp EEEEEC----CHHHHHT---C--------SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTT
T ss_pred CCCEEC----CCCCCCC---C--------CCCCCCCEEEEEECCCCCCEEEEEECCCCE-EEECCCCCEEEEEECCCCCC
T ss_conf 650304----3210002---5--------445789738999766999989999189849-99877896579983355776
Q ss_pred ------------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCC---CCCCC----CCCCCCCEE
Q ss_conf ------------97644189998599997999967982999976589444567402212---24566----667898628
Q 000703 295 ------------RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEEL---IPSIG----TSVPSPSIL 355 (1342)
Q Consensus 295 ------------~~~~~~~~v~~~pdg~~L~s~s~DgtI~lW~~~~g~~~~~~~~~e~~---~~~~g----~~~~~~~i~ 355 (1342)
.+...+..+.++|||..|++++.||+|++|+.++++++... ...+. .+..+ .......|.
T Consensus 197 ~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r-~l~~~~~~~~~~~~~~~~~~~~~~V~ 275 (902)
T 2oaj_A 197 APGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR-TVFETEINVPQPDYIRDSSTNAAKIS 275 (902)
T ss_dssp CCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE-CSSCSCTTSCCTTCCCCCSSCCCEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-EECCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 77765443323456777689998599999999989993999987899688888-50123457877767888855567745
Q ss_pred EEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC-----CCEEEEECCCCCCCCCCCCC
Q ss_conf 9997057024565531027999999976456898853343235675299999748-----80999991246435443443
Q 000703 356 AVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDD-----GKVWNWLLTAEGAGDLQKDA 430 (1342)
Q Consensus 356 ~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~D-----G~I~~Wdl~~~~~~~~~~~~ 430 (1342)
.+.+++.. .|. ++..+++++.| +.+++|++.......
T Consensus 276 ~v~w~~~~-------------------------------~pd--~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~----- 317 (902)
T 2oaj_A 276 KVYWMCEN-------------------------------NPE--YTSLLISHKSISRGDNQSLTMIDLGYTPRYS----- 317 (902)
T ss_dssp EEEEEECS-------------------------------STT--EEEEEEEEECSTTSSCCCEEEEEEEECCCGG-----
T ss_pred EEEEEECC-------------------------------CCC--CCEEEEECCCCCCCCCCEEEEEECCCCCCCC-----
T ss_conf 79997349-------------------------------998--8789996887777888528999547898755-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC
Q ss_conf 43467864111234696544576867500200342112246888999998776655531488843011257662999963
Q 000703 431 IKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVP 510 (1342)
Q Consensus 431 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~ 510 (1342)
.+. .+.+...+ . ....+..+. + .+...+..+.+.
T Consensus 318 -------------------~~s----------~~~~~~~~--~------------~~~~~~~~~--~-~~~~~v~~~~~~ 351 (902)
T 2oaj_A 318 -------------------ITS----------YEGMKNYY--A------------NPKQMKIFP--L-PTNVPIVNILPI 351 (902)
T ss_dssp -------------------GCC----------HHHHHHHH--H------------SCSEEEEEC--C-SSSSCEEEEEEC
T ss_pred -------------------CCC----------HHHHHHHH--C------------CCCCEEEEE--C-CCCCCEEEEEEC
T ss_conf -------------------542----------55654664--1------------745227874--1-899954799997
Q ss_pred CC-CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE-------EEECCCCEEE------------------
Q ss_conf 99-721001269987789998999992899199995899928899-------6332787479------------------
Q 000703 511 SP-SLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTAS-------FSVHNGTVRG------------------ 564 (1342)
Q Consensus 511 P~-~lt~~~~~~~~~~~~~~~llAsgs~dGtI~iWDl~tg~~~~~-------l~~H~~~V~~------------------ 564 (1342)
|. +.. ..|. .+...+++++.||+|++||+.++..... +..|...|++
T Consensus 352 ~~~sp~---~~g~----~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~ 424 (902)
T 2oaj_A 352 PRQSPY---FAGC----HNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAA 424 (902)
T ss_dssp CSSCSH---HHHT----BSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTT
T ss_pred CCCCCC---CCCC----CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCC
T ss_conf 788988---6778----785069999179848999789998556555689852235897248999974999998888604
Q ss_pred ----------------EEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEE---EEE-EC----CCCCCCEEEEE
Q ss_conf ----------------9975998389995387643457301879999767982001---488-12----68999969999
Q 000703 565 ----------------LRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRA---FRV-LQ----KPERAPIRALR 620 (1342)
Q Consensus 565 ----------------i~fs~~~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~---l~~-l~----~~~~~~I~~i~ 620 (1342)
++|+++++++. +|..+++|++||+.++.... +.. +. ..|...|.+++
T Consensus 425 ~~~~~~l~G~~~~v~sv~~spdg~~la---------Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~sva 495 (902)
T 2oaj_A 425 QNKDYLLKGGVRTKRQKLPAEYGTAFI---------TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495 (902)
T ss_dssp BCCCCSCCCSBCCCCCCCCCSEEEEEE---------EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEE---------EECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEE
T ss_conf 699975457857787533366675899---------96589838999787764567736775015413778887646999
Q ss_pred ECCCCCEEEEEECCCCEEEEECCCCCCEEEE--CCC-CEEEEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf 9689998999998997899966578611330--267-64899985999999999999976-6665577877557786666
Q 000703 621 ASSSGRYLLILFRDAPVEVWAMTKNPIMLRS--LAL-PFTVLEWTLPTVPWPSQTGPSRQ-SSLSSKDHKADTTDGVSTP 696 (1342)
Q Consensus 621 ~Spdg~~Las~s~D~~I~iWdl~kt~~~l~~--l~~-~vt~l~wsp~~~~~~~~~~~~k~-~~~~~~~~~~~~~~~~~~~ 696 (1342)
|||||++||+++.|++|+||++ .+++.... +.. .-..+.+.. .....++... ........ ....+-. .
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~g~~-~ 567 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKY-EVNQFYSVENRPESGDLEMNFRR----FSLNNTNGVLVDVRDRAPT--GVRQGFM-P 567 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEE-EECCC---------------CCS----CCGGGSSCSEEECGGGCCT--TCSEEEE-E
T ss_pred ECCCCCEEEEEECCCEEEEEEE-CCCCCCCCCCCCCCCCCCEEEEE----CCCCCCCCCCCCCCCCCCC--CCCCCCC-E
T ss_conf 6389996999945857999992-48655575455778665113455----1346796543224236898--8777601-4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCC-CCCCEEEEEEEC----------C
Q ss_conf 42378998677888867899985999956997999993498231267788997523-556629998546----------9
Q 000703 697 TIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFI-SSDGLITAMAYR----------L 765 (1342)
Q Consensus 697 ~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~I~vwdv~g~~i~d~~~~~~~~~~~-~~~~~V~~ia~d----------g 765 (1342)
..+-..|...+.+.. ..+++ .+|+++.|++|++||+++..+.. +... ..+. +|.+.|++|+|. +
T Consensus 568 ~~~l~~h~~~V~sva-fSpdG-~lAsgs~D~tv~lwd~~~~~~~~-~~~~--~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~ 642 (902)
T 2oaj_A 568 STAVHANKGKTSAIN-NSNIG-FVGIAYAAGSLMLIDRRGPAIIY-MENI--REISGAQSACVTCIEFVIMEYGDDGYSS 642 (902)
T ss_dssp EEEECCCSCSEEEEE-ECBTS-EEEEEETTSEEEEEETTTTEEEE-EEEG--GGTCSSCCCCEEEEEEEEEECTTSSSEE
T ss_pred EEEEECCCCCEEEEE-ECCCC-EEEEEECCCCEEEEECCCCEEEE-EEEH--HHHCCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 699986888677999-64876-89999589769999888983999-7024--6726466661399999998417898763
Q ss_pred CEEEEEECCCCEEEEEC---CCCC-EEEECCC-----CCCEEEEE-EECCCC---------------CCCCCCEEEEEEC
Q ss_conf 99999967994999989---9996-2430146-----66578999-914899---------------9987787999988
Q 000703 766 PHVVMGDRSGNIRWWDV---TTGH-SSQFSTH-----REGIRRIK-FSPVVP---------------GDRSRGRIAVLFH 820 (1342)
Q Consensus 766 ~~Lvsgs~DG~I~iWDl---~t~~-~~~l~~H-----~~~V~~I~-FSP~~~---------------g~~~~~~Las~s~ 820 (1342)
.+|++|+.||+|++||+ .+|. ..++.+| .++|.++. |+...+ +....++++++ .
T Consensus 643 ~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~-~ 721 (902)
T 2oaj_A 643 ILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLIT-G 721 (902)
T ss_dssp EEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEE-C
T ss_pred EEEEEEECCCCEEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEE-E
T ss_conf 389999568739999995589986899966724407889647998586687973668878972557788777399999-3
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE---E------EECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 98199998898874332334777799848999---9------80799889998699999689929999714884002
Q 000703 821 DNTFSVFDLDSQDPLANSLLQPQFPGTLVLEL---D------WLPTRTDKNDPLVLCIAGADSSFRLIEVNTSEKKI 888 (1342)
Q Consensus 821 DgtI~IWDl~t~~~l~~~l~~~h~~~~~V~~l---~------w~~~~~~~~~~l~L~sas~DgsIrvWdi~~~~~~~ 888 (1342)
|..||||++.+++++. .. ..|. ..+.++ . |.++ ...|++.+.||+|++|+++..++..
T Consensus 722 ~~~ir~~~~~~~k~~~-k~-~~~~--~~~~~v~~~~~~~~~~~~~~------~~~l~~~~~~g~i~~~s~p~l~~~~ 788 (902)
T 2oaj_A 722 FDDIRLITLGKSKSTH-KG-FKYP--LAATGLSYISTVEKNNDRKN------LTVIITLEINGHLRVFTIPDFKEQM 788 (902)
T ss_dssp SSEEEEECTTCCCEEE-EE-CSSC--EEEEEEEEEEEECSSSCEEE------EEEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEECCCCCCEE-EE-CCCC--EEEEEEEEEEECCCCCCCCC------CEEEEEEECCCCEEEEECCCHHHHH
T ss_conf 5405999675335123-67-2562--01447778870135554467------3699999279959999785647784
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=412.04 Aligned_cols=538 Identities=15% Similarity=0.128 Sum_probs=406.7
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC----EEEEEECCCCCCCCC-EEEEEEEE--CCCCC
Q ss_conf 699999802897656577889999869999949996999848999----399996489999998-66999855--49997
Q 000703 77 FVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLR----SVVLWIDPDPNPKLG-IQDLCWIV--SKPDS 149 (1342)
Q Consensus 77 ~Vt~v~fsp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg----~~~~~l~~~~h~~~~-V~~l~wsp--~~~~~ 149 (1342)
.|++++|+|+ +.+||+++ ++.|+|||+.++ +....+ .+|.+ + |.+++|+| ++
T Consensus 20 ~v~~~~~spd--------------g~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~--~~h~~-~~v~~~~~sp~~~~--- 78 (615)
T 1pgu_A 20 FTTHLSYDPT--------------TNAIAYPC-GKSAFVRCLDDGDSKVPPVVQF--TGHGS-SVVTTVKFSPIKGS--- 78 (615)
T ss_dssp CCCCCEEETT--------------TTEEEEEE-TTEEEEEECCSSCCSSCSEEEE--CTTTT-SCEEEEEECSSTTC---
T ss_pred CEEEEEECCC--------------CCEEEEEC-CCEEEEEECCCCCCCCCCCEEE--ECCCC-CEEEEEEECCCCCC---
T ss_conf 5368998899--------------99799935-9849999777887765143188--05788-44999997967899---
Q ss_pred CEEEEEECCCEEEEEECCCC--------EEEEEEECCCCCEEEEEECCCCCCEEEEEECC----CEEEEEEECCCCCCCE
Q ss_conf 19999928981999978999--------27899808997548999658999989998079----7299999249855430
Q 000703 150 FVLAAINGPSVLSLYNTTSA--------SCMWKYDASPEYLSCIRRNPFDARHFCVLGLK----GLLLSVRVLGQKEDEV 217 (1342)
Q Consensus 150 ~~Las~~~d~~i~lWd~~tG--------~~i~~~~~~~~~i~~l~~~P~d~~~la~~~~d----g~i~~~d~~~~~~~~~ 217 (1342)
.+|++++.|+.|++||+.++ ..+..+..+...+.+++|+| +++.+++++.+ +.+.+||. +. .
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~-~~---~- 152 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS-GN---S- 152 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT-CC---E-
T ss_pred CEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEC-CCCEEEEECCCCCCCCEEEEEEC-CC---C-
T ss_conf 889996489879997688876554455420001112566379999907-99989993168777557999978-98---1-
Q ss_pred EEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC-CEEEEECCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 4635898427510123554410265778998776753469999936887-209997488499998468812589953897
Q 000703 218 VVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWR-HIIFVTFPRELVVFDLQYETPLFSAALPRG 296 (1342)
Q Consensus 218 ~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~FSpdg~-~ll~~~~d~~I~iwDl~t~~~l~~~~l~~~ 296 (1342)
...+ ..+...+..++|+|+++ .+++++.|+.|++||+++++.+..+..+
T Consensus 153 -~~~~---------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-- 202 (615)
T 1pgu_A 153 -LGEV---------------------------SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-- 202 (615)
T ss_dssp -EEEC---------------------------CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS--
T ss_pred -CEEE---------------------------ECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCEEEEECCC--
T ss_conf -0313---------------------------0677438899988789968999957995999969996101320256--
Q ss_pred CC---CEEEEEECCC-CCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
Q ss_conf 64---4189998599-9979999679829999765894445674022122456666789862899970570245655310
Q 000703 297 CA---KFLDVLADPN-NDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKL 372 (1342)
Q Consensus 297 ~~---~~~~v~~~pd-g~~L~s~s~DgtI~lW~~~~g~~~~~~~~~e~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~ 372 (1342)
.. ++..+.++|+ ++.|++++.||.|++|+.++++....+.. +..+ ....+..+.++ +
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----~~~~---~~~~v~~~~~~-~---------- 263 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED-----DQEP---VQGGIFALSWL-D---------- 263 (615)
T ss_dssp SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB-----TTBC---CCSCEEEEEES-S----------
T ss_pred CCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECC-----CCCC---CCCCEEEEEEC-C----------
T ss_conf 777742899997897788899986898089998999978589525-----4445---67755899981-8----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 27999999976456898853343235675299999748809999912464354434434346786411123469654457
Q 000703 373 CLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSM 452 (1342)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 452 (1342)
+..+++++.||.|++|++..+.......
T Consensus 264 ----------------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~~------------------------ 291 (615)
T 1pgu_A 264 ----------------------------SQKFATVGADATIRVWDVTTSKCVQKWT------------------------ 291 (615)
T ss_dssp ----------------------------SSEEEEEETTSEEEEEETTTTEEEEEEE------------------------
T ss_pred ----------------------------CCEEEEECCCCCEEEEECCCCCEEEEEC------------------------
T ss_conf ----------------------------9979998489948999788892787884------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 68675002003421122468889999987766555314888430112576629999639972100126998778999899
Q 000703 453 ASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLV 532 (1342)
Q Consensus 453 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~G~l~g~~~~vtsl~~~P~~lt~~~~~~~~~~~~~~~ll 532 (1342)
..-..+...+.++.++ .+..+
T Consensus 292 ------------------------------------------~~~~~~~~~~~~~~~~-----------------~~~~l 312 (615)
T 1pgu_A 292 ------------------------------------------LDKQQLGNQQVGVVAT-----------------GNGRI 312 (615)
T ss_dssp ------------------------------------------CCTTCGGGCEEEEEEE-----------------ETTEE
T ss_pred ------------------------------------------CCCCCCCCCEEEEEEC-----------------CCCEE
T ss_conf ------------------------------------------7877545714699918-----------------99769
Q ss_pred EEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 99928991999958999288996332787479997599838999538764345730187999976798200148812689
Q 000703 533 ALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPE 612 (1342)
Q Consensus 533 Asgs~dGtI~iWDl~tg~~~~~l~~H~~~V~~i~fs~~~~liS~S~~~~~~~~g~~~n~I~iwDl~tG~~~~l~~l~~~~ 612 (1342)
++|+.||.|++||+.++.....+.+|...|++++| ++ +++.+.+ +.|++||+. .+. . .|
T Consensus 313 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~d----------g~i~~w~~~-----~~~--~-~~ 371 (615)
T 1pgu_A 313 ISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYD----------GRIMEWSSS-----SMH--Q-DH 371 (615)
T ss_dssp EEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETT----------SCEEETTTT-----EEE--C-CC
T ss_pred EEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEE-CC--CEEECCC----------CEEEEEECH-----HHC--C-CC
T ss_conf 99978997899988899288999477787899995-67--4898799----------959998752-----415--7-55
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99969999968999899999899789996657861133026764899985999999999999976666557787755778
Q 000703 613 RAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDG 692 (1342)
Q Consensus 613 ~~~I~~i~~Spdg~~Las~s~D~~I~iWdl~kt~~~l~~l~~~vt~l~wsp~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 692 (1342)
..+|.++.| ++++++++++.|+.+++|++ +++.+.. ....++|+|+
T Consensus 372 ~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~-~~~~~~~----~~~~~~~s~~---------------------------- 417 (615)
T 1pgu_A 372 SNLIVSLDN-SKAQEYSSISWDDTLKVNGI-TKHEFGS----QPKVASANND---------------------------- 417 (615)
T ss_dssp CSCEEEEEC-CSTTCCEEEETTTEEEETTE-EEEECSS----CEEEEEECSS----------------------------
T ss_pred CCCEEEEEE-CCCCEEEEEECCCCEEEEEC-CCCCCCC----CCEEEEECCC----------------------------
T ss_conf 685179997-89867999958997999886-6676367----8469998289----------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE-CCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 666642378998677888867899985999956997999993-4982312677889975235566299985469999999
Q 000703 693 VSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEV-HGRRIRDFRPKWPSSSFISSDGLITAMAYRLPHVVMG 771 (1342)
Q Consensus 693 ~~~~~~~~~~~~~~~~s~~s~~~~~e~la~~~~Dg~I~vwdv-~g~~i~d~~~~~~~~~~~~~~~~V~~ia~dg~~Lvsg 771 (1342)
+..++. ..++.+.+|++ .++.++.+ .+...+.+++|.+++++++
T Consensus 418 ------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 418 ------------------------GFTAVL-TNDDDLLILQSFTGDIIKSV----------RLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp ------------------------SEEEEE-ETTSEEEEEETTTCCEEEEE----------ECSSCEEEEEECSSEEEEE
T ss_pred ------------------------CCEEEE-ECCCCEEEEECCCCCEEEEC----------CCCCCCEEEEECCCEEEEE
T ss_conf ------------------------878999-67982699944678665551----------5678720778838889996
Q ss_pred EC-CCCEEEEECCCCCE--EEECCCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC-CCCCC
Q ss_conf 67-99499998999962--4301466657899991489999877879999889819999889887433233477-77998
Q 000703 772 DR-SGNIRWWDVTTGHS--SQFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQP-QFPGT 847 (1342)
Q Consensus 772 s~-DG~I~iWDl~t~~~--~~l~~H~~~V~~I~FSP~~~g~~~~~~Las~s~DgtI~IWDl~t~~~l~~~l~~~-h~~~~ 847 (1342)
+. ||.|++||+.++.. ..+.+|...|.+++|+|+ + .+|++++.|+.|++||+.+++.+ ..+ .+ |. .
T Consensus 463 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--g----~~l~~~~~dg~i~iw~~~~~~~~-~~~-~~~h~--~ 532 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS--E----TYIAAGDVMGKILLYDLQSREVK-TSR-WAFRT--S 532 (615)
T ss_dssp ETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTT--S----SEEEEEETTSCEEEEETTTTEEE-ECC-SCCCS--S
T ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC--C----CEEEECCCCCEEEEEECCCCCCE-EEE-ECCCC--C
T ss_conf 5689869999888854353336776575079999899--9----98998179985998657777624-676-04788--7
Q ss_pred CEEEEEEEC----------CCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 489999807----------99889998699999689929999714884002434442000012568986664003530
Q 000703 848 LVLELDWLP----------TRTDKNDPLVLCIAGADSSFRLIEVNTSEKKIGYTSQSRAIKERFRPMPLCLPILLPTS 915 (1342)
Q Consensus 848 ~V~~l~w~~----------~~~~~~~~l~L~sas~DgsIrvWdi~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 915 (1342)
.|.+++|+| + ++ +|++++.||+|++|++........ .... ...++.+..+.|.+
T Consensus 533 ~v~~~~~sp~~~~~~~~~~~----~~--~l~~~~~dg~i~iw~~~~~~~~~~------~~~~--h~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 533 KINAISWKPAEKGANEEEIE----ED--LVATGSLDTNIFIYSVKRPMKIIK------ALNA--HKDGVNNLLWETPS 596 (615)
T ss_dssp CEEEEEECCCC------CCS----CC--EEEEEETTSCEEEEESSCTTCCEE------ETTS--STTCEEEEEEEETT
T ss_pred CEEEEEECCCCCCCCCCCCC----CC--EEEEECCCCCEEEEECCCCCEECH------HHHC--CCCCEEEEEECCCC
T ss_conf 14699976832345332468----88--899981797199997788854031------1335--94305899973899
Done!