Your job contains 1 sequence.
>000705
MTRNFVFPQNLQALEEQEDEEHDGNRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELF
CIEEQDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPV
LDRLSSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQPVNSWNWDPQRGRIL
NLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGACAT
KYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVK
DTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDI
EGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEV
AAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHSES
ITDGLPSDRGTCNGDGEVDDLNAEVVVQEQQESLTDSCLPLADEGIADKDSSVPDVGNLE
QTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACL
HKMLPLVLSQDKSIYEAVENAFITIYVRKSPVETAKNLLNLAIDSNIGDQAAMEFIVGTL
VSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGF
GRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRVFATLESLITGFWLPDNIWYTAAD
KAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRY
LFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELG
LAASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAML
ALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYA
RLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKK
GNNPIYNLLPDILGKLCNQNLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDI
RQWEYISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKV
CIEEFEEKLNKYHTEKKDQEATTRNAQIHQQKVNTMGNSVADRNAGEESAESDISEDDES
IGPSAKRTNQYINNISKSQSDGSEEHSGASSEVTETETGDIEVQSPRVMMKGTKSRAKKS
TLKDVKGTISGSNRRNIRSKQR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000705
(1342 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0293984 - symbol:ncapD2 "non-SMC condensin... 986 1.1e-143 4
MGI|MGI:1915548 - symbol:Ncapd2 "non-SMC condensin I comp... 972 1.2e-142 2
UNIPROTKB|F1N3G4 - symbol:NCAPD2 "Uncharacterized protein... 957 3.6e-140 2
UNIPROTKB|E2RHZ0 - symbol:NCAPD2 "Uncharacterized protein... 965 1.5e-139 2
UNIPROTKB|Q15021 - symbol:NCAPD2 "Condensin complex subun... 968 6.6e-139 2
RGD|1562596 - symbol:Ncapd2 "non-SMC condensin I complex,... 946 1.5e-136 2
UNIPROTKB|F5GZJ1 - symbol:NCAPD2 "Condensin complex subun... 968 3.8e-136 2
ZFIN|ZDB-GENE-050506-59 - symbol:ncapd2 "non-SMC condensi... 849 3.7e-122 2
UNIPROTKB|F1NEH3 - symbol:NCAPD2 "Condensin complex subun... 835 9.4e-120 2
UNIPROTKB|F1NH88 - symbol:NCAPD2 "Condensin complex subun... 832 2.0e-119 2
UNIPROTKB|F1SLS9 - symbol:NCAPD2 "Uncharacterized protein... 945 6.9e-95 1
FB|FBgn0039680 - symbol:CAP-D2 "CAP-D2 condensin subunit"... 577 8.5e-93 3
POMBASE|SPBC776.13 - symbol:cnd1 "condensin complex non-S... 878 2.7e-87 1
ASPGD|ASPL0000038678 - symbol:AN3451 species:162425 "Emer... 861 4.2e-84 1
SGD|S000004262 - symbol:YCS4 "Subunit of the condensin co... 717 1.7e-67 1
CGD|CAL0001793 - symbol:YCS4 species:5476 "Candida albica... 552 4.7e-66 2
UNIPROTKB|Q59U69 - symbol:YCS4 "Potential nuclear condens... 552 4.7e-66 2
UNIPROTKB|E7EN77 - symbol:NCAPD2 "Condensin complex subun... 338 1.8e-54 2
WB|WBGene00001087 - symbol:dpy-28 species:6239 "Caenorhab... 266 2.6e-25 4
TAIR|locus:2130869 - symbol:AT4G15890 species:3702 "Arabi... 151 2.7e-06 4
UNIPROTKB|F1MPS0 - symbol:NCAPD3 "Uncharacterized protein... 124 7.2e-05 3
UNIPROTKB|F1NS98 - symbol:F1NS98 "Uncharacterized protein... 121 0.00075 2
>DICTYBASE|DDB_G0293984 [details] [associations]
symbol:ncapD2 "non-SMC condensin I complex, subunit
D2" species:44689 "Dictyostelium discoideum" [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR016024
InterPro:IPR026971 dictyBase:DDB_G0293984 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007076 eggNOG:COG5098
KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
EMBL:AAFI02000224 InterPro:IPR004931 Pfam:PF03247
RefSeq:XP_628899.1 ProteinModelPortal:Q54B17 STRING:Q54B17
EnsemblProtists:DDB0304964 GeneID:8629515 KEGG:ddi:DDB_G0293984
InParanoid:Q54B17 OMA:EPDSAQC ProtClustDB:CLSZ2429200
Uniprot:Q54B17
Length = 1403
Score = 986 (352.1 bits), Expect = 1.1e-143, Sum P(4) = 1.1e-143
Identities = 265/784 (33%), Positives = 416/784 (53%)
Query: 549 LEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVL 608
L++ +F K ++ST+ T+ QLM S + SD+ ++ + ++QID ++ + KML L+
Sbjct: 544 LDSSCKFIKIINSTIDTMCQLMGSVNPSDILESVHFIQVAHKYQIDKSKEAITKMLALIW 603
Query: 609 SQDKSIYEAVENAFITIYVR------KSPVET----AKNLLNLAIDSNIGDQAAMEFIVG 658
++++SI E+ +F + ++ KS +++ AKNL++L + +G+ ++E ++
Sbjct: 604 NKEQSIKESTIRSFHELLIKDTREKVKSTLKSSYYIAKNLIDLTTTATLGEITSLEELMI 663
Query: 659 TLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDI 718
K + I ALWD F V + SR AL +L M + ++++V+ + ++ I
Sbjct: 664 EFTKKDLIDQDIIKALWDIFSGKVVNFNKQDSRGALIILSMISNNNSSVVKDKVNLLVSI 723
Query: 719 GFGRWAKVEPLLARTACIAIQRLSQEDKKKL--LLSYGSRVFATLESLITGFWLPDNIWY 776
G + + L R CI +Q+L + K+ +L + E LI
Sbjct: 724 GLEE--QDDEFLPRYTCITLQKLRSKGLKETDQILPRFKNNQSLFERLIYHICSTTTTTT 781
Query: 777 TAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSK 836
T D + I V L+ D + E D V + Q
Sbjct: 782 TTNDNIDNDIKNSKWFMFAEQVINTIYILAEQPDLISSEIIKKLSDQVLDENGETNQYC- 840
Query: 837 LGRYLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSIN 896
L + +FIL HIA+ QLVY+E EI++ + ++ K +N NNN N K T I
Sbjct: 841 LSKLIFILGHIAIKQLVYVEEIQSEIKRIQYEQSKQ---SKN---NNNNN---KKKTDIE 891
Query: 897 AELGLAASE-DAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLM---NKYP 952
ELG +E +A+ + + +AE +I+S + NLIG + + C N++ + ++P
Sbjct: 892 KELGTDQAEAEAESEAIQIQAESDILS----ENNLIGKYSQLVVSICYNYNEIFSNEQFP 947
Query: 953 E--LQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNL 1010
LQ SA+L L +FM +D+++C++NLQLLFT++E S E++RSN I LGDLA RFPNL
Sbjct: 948 NQLLQTSAVLTLSKFMCVDSNFCESNLQLLFTLLEKSSIEVIRSNIIIGLGDLAFRFPNL 1007
Query: 1011 LEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLA 1070
+EPWT +Y+RL+DP+ RKN+++VL+HLILNDM+KVKG I+EMAI +ED D RISN+A
Sbjct: 1008 VEPWTSKIYSRLRDPNADARKNSLMVLTHLILNDMIKVKGQISEMAICLEDSDIRISNIA 1067
Query: 1071 KLFFHELSKKGNNPIYNLLPDILGKLC-------N-QNLKTESFCNIMQLLIGFIKKDKQ 1122
KLFF L+ KGNN +YN LPDI+GK+ N N+ +S NI++ L FI+KDKQ
Sbjct: 1068 KLFFSTLASKGNN-LYNSLPDIIGKITPASTVTSNLNNISKDSIKNILKYLFSFIEKDKQ 1126
Query: 1123 MEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDN 1182
E L++KL RF I + + IS+CL L + +K +KKLIE FK Y+ L+++ + +N
Sbjct: 1127 SETLIDKLLQRFKTSKSISESQNISFCLQLLNYNDKSLKKLIEHFKLYQDKLNDNEIYNN 1186
Query: 1183 FRNIINKSKK---FAKP-EVKVCIEEFEEKLNKYHTEKKDQEATTRNAQIHQQKVNTMGN 1238
I+K+KK K E+K ++E E+K+N + Q Q+ Q+ T GN
Sbjct: 1187 LMISISKTKKQPNLTKTSEIKQLVDEIEKKINT----ARSQLTLGETVQLVQE---TDGN 1239
Query: 1239 SVADRNXXXXXXXXXXXXXXXXXXPSAKRTNQYINNISKSQSDGSEEHSGASSEVTETET 1298
S + PS K + K EE S SSE + E+
Sbjct: 1240 S----SGTSSTTTTSQSIQKPPLKPSKKAPAKKRAPSRKKYQSSEEEESEESSEEEDEES 1295
Query: 1299 GDIE 1302
GD E
Sbjct: 1296 GDDE 1299
Score = 270 (100.1 bits), Expect = 1.1e-143, Sum P(4) = 1.1e-143
Identities = 76/246 (30%), Positives = 123/246 (50%)
Query: 282 LATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKI 341
L + +IREIG+ + +DT G +N+ +FL EL DRLPK++ + +L+ H ESY +
Sbjct: 224 LISDIIREIGKQKEQ---RDTSGFKNLAKFLSELTDRLPKIVLPFVSLLLAHLDSESYLM 280
Query: 342 RNALVGVLGKLVAKAFKDIEGEASSKS--------VRLRTKQA-----MLEILLERCRDV 388
RNA+ +G L+ KA +E K V + K +L IL ERCRD+
Sbjct: 281 RNAVTESIGFLIGKALNKVESNNKDKKSEQEEEEEVENQKKNESDQSELLHILFERCRDI 340
Query: 389 SAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNP 448
+ Y RS VL+ + L + V + ++ ++A R+ DK+++VRK A+ LL +L+ NP
Sbjct: 341 NGYCRSSVLKTLSLLVNNNWVPKESYIQLTKIAIERVSDKNSLVRKRAILLLSDILESNP 400
Query: 449 FGPQLRIASFEATLDEYRK--KLNGLEPDIHSESITDGLPSDRGTCNGDGEVDDLNAEVV 506
+ P L F+ ++ KL+ E + N + E D LN++ V
Sbjct: 401 YSPHLPTLLFKDKKEKLASFIKLSFYNLKKKKELLKKSKKLKNNN-NNNNEDDLLNSQQV 459
Query: 507 VQEQQE 512
+ E
Sbjct: 460 PDDNME 465
Score = 144 (55.7 bits), Expect = 1.1e-143, Sum P(4) = 1.1e-143
Identities = 34/126 (26%), Positives = 64/126 (50%)
Query: 150 SSNNNP--KVTA---STRKKQP--VNSWNWDPQRGRILNLIANSLEINLPLLFGSSDPDE 202
S NNN +T+ ST+KK +++W + Q+ IL I N LE+NL L+ P+E
Sbjct: 59 SENNNETASITSKKKSTKKKNSSVLDTWEQEEQKEAILTSIINCLELNLSTLWRLDYPEE 118
Query: 203 NYLSFVVRNAFLMFENATLLKDADTKDALCRIIGACATKYHYIEQSCASIMHLIHKYDFV 262
+++ + + + M E L+ K + ++ +Y++ + I+HL+H ++ +
Sbjct: 119 EFINLLSKIIYAMIEQPANLRSKGVKKLIFEVLSILILRYNHSFNFTSKIIHLLHNHESL 178
Query: 263 VVHMAD 268
H AD
Sbjct: 179 PSHCAD 184
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 57/252 (22%), Positives = 102/252 (40%)
Query: 1000 LGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRV 1059
L +L R P ++ P+ + A L S +R + LI + KV+ N+
Sbjct: 251 LSELTDRLPKIVLPFVSLLLAHLDSESYLMRNAVTESIGFLIGKALNKVESN-NKDKKSE 309
Query: 1060 EDEDQRISNLAKL------FFHELSKKG---NNPIYNLLPDILGKLCNQN-LKTESFCNI 1109
++E++ + N K H L ++ N + + L L N N + ES+ +
Sbjct: 310 QEEEEEVENQKKNESDQSELLHILFERCRDINGYCRSSVLKTLSLLVNNNWVPKESYIQL 369
Query: 1110 MQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMK--KLIE-S 1166
++ I + DK +LV K ++DI + S L L F +K K I+ S
Sbjct: 370 TKIAIERVS-DKN--SLVRKRAILL--LSDILESNPYSPHLPTLLFKDKKEKLASFIKLS 424
Query: 1167 F---KTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLN--KYHTEKKDQEA 1221
F K + L + + N N N+ +V EFE++ K EKK++E
Sbjct: 425 FYNLKKKKELLKKSKKLKNNNNNNNEDDLLNSQQVPDDNMEFEQQQQQQKEEEEKKEKEE 484
Query: 1222 TTRNAQIHQQKV 1233
+ ++++
Sbjct: 485 EDGEEEEEEEEI 496
Score = 63 (27.2 bits), Expect = 1.1e-143, Sum P(4) = 1.1e-143
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 1263 PSAKRTNQYINNISKSQSDGSEEHSGASSEVTETETGDIEVQSPRVMMKGTKSRAKKSTL 1322
PS KR Q + S+S+ S E S SSE+++ + DI + P K ++KK
Sbjct: 1316 PSRKR--QPVQKKKSSESEQSSE-SDQSSEISDIDRMDITPKKPP--KKPQPKQSKKKPA 1370
Query: 1323 KDVKGTISGS 1332
+K IS S
Sbjct: 1371 SRLKKAISQS 1380
Score = 45 (20.9 bits), Expect = 6.8e-05, Sum P(5) = 6.8e-05
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 868 KKEKMIADDQNIHSNNNTNG--DLPKDTSI---NAELGLAASEDAKLDTLSEKAEKE 919
KK++++ + + +NNN N DL + N E + + + EK E++
Sbjct: 430 KKKELLKKSKKLKNNNNNNNEDDLLNSQQVPDDNMEFEQQQQQQKEEEEKKEKEEED 486
Score = 44 (20.5 bits), Expect = 2.2e-27, Sum P(3) = 2.2e-27
Identities = 63/346 (18%), Positives = 132/346 (38%)
Query: 985 ESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAV-RKNAVLVLSHLILN 1043
E P+++++++ + L N E + ++ L+ S+ V R N ++ L L
Sbjct: 944 EQFPNQLLQTSAVLTLSKFMCVDSNFCESNLQLLFTLLEKSSIEVIRSNIIIGLGDLAFR 1003
Query: 1044 DMMKVKGYINEMAIRVEDE--DQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQNL 1101
V+ + +++ R+ D D R ++L L + I N + + G++ +
Sbjct: 1004 FPNLVEPWTSKIYSRLRDPNADARKNSLMVL---------THLILNDMIKVKGQISEMAI 1054
Query: 1102 KTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDI-RQWEYISYCLSQLAFTEK-G 1159
E + I I K L K N ++ + DI + S S L K
Sbjct: 1055 CLED----SDIRISNIAK-LFFSTLASKGNNLYNSLPDIIGKITPASTVTSNLNNISKDS 1109
Query: 1160 MKKLIES-FKTYEHALSEDSVMDNFRNIINKSKKFAKPE-VKVCIE--EFEEK-LNKYHT 1214
+K +++ F E ++++D SK ++ + + C++ + +K L K
Sbjct: 1110 IKNILKYLFSFIEKDKQSETLIDKLLQRFKTSKSISESQNISFCLQLLNYNDKSLKKLIE 1169
Query: 1215 EKKDQEATTRNAQIHQQKVNTMGNSVADRNXXXXXXXXXXXXXXXXXXPSAKRTNQYINN 1274
K + + +I+ + ++ + N +A+
Sbjct: 1170 HFKLYQDKLNDNEIYNNLMISISKTKKQPNLTKTSEIKQLVDEIEKKINTARSQLTLGET 1229
Query: 1275 ISKSQ-SDGSEEHSGASSEVTETETGDIEVQSPRVMMKGTKSRAKK 1319
+ Q +DG+ SG SS T +++ +Q P + K+ AKK
Sbjct: 1230 VQLVQETDGNS--SGTSSTTTTSQS----IQKPP-LKPSKKAPAKK 1268
Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 15/79 (18%), Positives = 40/79 (50%)
Query: 1157 EKGMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEK 1216
+K + K + K + +ED ++ N + + + + +F + + + EE +++ + E+
Sbjct: 431 KKELLKKSKKLKNNNNNNNEDDLL-NSQQVPDDNMEFEQQQQQQKEEEEKKEKEEEDGEE 489
Query: 1217 KDQEATTRNAQIHQQ-KVN 1234
+++E QI + K+N
Sbjct: 490 EEEEEEITEKQIFEDIKLN 508
Score = 42 (19.8 bits), Expect = 5.5e-106, Sum P(3) = 5.5e-106
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 4 NFVFPQNLQALEEQED----EEHDGNRLYAQNPISITSMHPSELVEFVKGVSFDL 54
N F Q Q +E+E+ EE DG + IT E ++ K FDL
Sbjct: 463 NMEFEQQQQQQKEEEEKKEKEEEDGEE--EEEEEEITEKQIFEDIKLNKEQFFDL 515
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(4) = 0.00010
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 424 RLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDE 464
RL D +A RK++L +L ++ ++ + +I+ L++
Sbjct: 1018 RLRDPNADARKNSLMVLTHLILNDMIKVKGQISEMAICLED 1058
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(4) = 2.4e-28
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 1165 ESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEV 1198
ES ++ E E+S D R II K +KP V
Sbjct: 1283 ESEESSEEE-DEESGDDEDRMIITPKKPISKPMV 1315
Score = 38 (18.4 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 755 SRVFATLESLITGFWLPDNIWYTAADKAISAI 786
S V TL L+ W+P + AI +
Sbjct: 346 SSVLKTLSLLVNNNWVPKESYIQLTKIAIERV 377
>MGI|MGI:1915548 [details] [associations]
symbol:Ncapd2 "non-SMC condensin I complex, subunit D2"
species:10090 "Mus musculus" [GO:0000793 "condensed chromosome"
evidence=ISO;IDA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0042393
"histone binding" evidence=ISO] [GO:0045120 "pronucleus"
evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 MGI:MGI:1915548 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0000793
GO:GO:0007076 GO:GO:0000228 GO:GO:0045120 CTD:9918 eggNOG:COG5098
HOVERGEN:HBG038048 KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 EMBL:AK129068 EMBL:BC006673 EMBL:BC008592
EMBL:BC025460 EMBL:BC026982 EMBL:BC029133 EMBL:AK011352
EMBL:AK019259 IPI:IPI00172226 IPI:IPI00275153 RefSeq:NP_666283.1
UniGene:Mm.257590 ProteinModelPortal:Q8K2Z4 STRING:Q8K2Z4
PhosphoSite:Q8K2Z4 PaxDb:Q8K2Z4 PRIDE:Q8K2Z4
Ensembl:ENSMUST00000043848 GeneID:68298 KEGG:mmu:68298
UCSC:uc009dtt.1 GeneTree:ENSGT00390000017108 OrthoDB:EOG4W6NV7
NextBio:326949 Bgee:Q8K2Z4 CleanEx:MM_NCAPD2 Genevestigator:Q8K2Z4
GermOnline:ENSMUSG00000038252 GO:GO:0000796 Uniprot:Q8K2Z4
Length = 1392
Score = 972 (347.2 bits), Expect = 1.2e-142, Sum P(2) = 1.2e-142
Identities = 267/837 (31%), Positives = 439/837 (52%)
Query: 501 LNAEVVVQEQQESLTDSCLPLADEGIA-DKDS-SVPDV-GN-----LEQTRALVASLEAG 552
LN ++ + E+ T D G+ KDS SVP+ G+ L + LV L+
Sbjct: 558 LNLLGLIFKGPEASTQDSHGDTDPGLTGSKDSPSVPEPEGSQSNDELVKQEMLVQYLQDA 617
Query: 553 LRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDK 612
FS+ ++ + + ++M ++ + V+ I + QF + A + +MLPL+ S++
Sbjct: 618 YGFSQKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVPQALFGVRRMLPLIWSKEP 677
Query: 613 SIYEAVENAFITIYVR-KSPVETAK------NLLNLAIDSNIGDQAAMEFIVGTLVSKGD 665
+ EAV NA+ +Y+ K AK NL L +D+++G +E I+ V K +
Sbjct: 678 GVREAVLNAYRQLYLNPKGDSARAKAQTLIHNLSLLLVDASVGTIQCLEEILCEFVQKDE 737
Query: 666 VSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAK 725
V + I LW+ V + E+ + + +L M A+ ++GS+L ++ +G +
Sbjct: 738 VKPAVIQLLWERATEKVPSSPLERCSSVM-LLGMMARGKPEIVGSNLDALVRVGLDEKSP 796
Query: 726 VEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFATLESLIT-GFWLPDNIWYT 777
+ LA+ C+AI +S K L L R+F L+ ++T GF PD +W
Sbjct: 797 QDYRLAQQVCLAIANISDRRKPSLGERHPPFRLPQEHRLFERLQDMVTKGFAHPDPLWIP 856
Query: 778 AADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTS--MPTSVQVS 835
+ A++ Y + +P+ L +++ V + + E+ D T+ +PT + ++
Sbjct: 857 FKEVAVTLTYQLAESPDVLCAQMLQGCAKQVLEKL--EKNATEADPKETAPRLPTFLLMN 914
Query: 836 KLGRYLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSI 895
L + +A+ QLV++E V ++ + +++ ++Q + +T++
Sbjct: 915 LLS----LAGDVALQQLVHLEQAV----SGELGRRRVLREEQEHRAKEPKEKTASSETTM 966
Query: 896 NAELGL---AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKYP 952
ELGL A ++D + + + EKE++ G ++ L K C N L + P
Sbjct: 967 EEELGLVGGATADDTEAELIRSICEKELLDGNQ----VLAAFVPLLLKVCNNPGLYSN-P 1021
Query: 953 ELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLE 1012
EL A+A LAL +F +I A +CD+ L+LLFT++E S VRSN +A GDLA+RFPNL++
Sbjct: 1022 ELCAAASLALGKFCMISAPFCDSQLRLLFTMLEKSSLPTVRSNLMVATGDLAIRFPNLVD 1081
Query: 1013 PWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKL 1072
PWT ++YARL+DP+ VRK A LV++HLIL DM+KVKG ++EMA+ + D +I+ LAK
Sbjct: 1082 PWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVKVKGQVSEMAVLLIDPVPQIAALAKN 1141
Query: 1073 FFHELSKKGNNPIYNLLPDILGKLCNQN--LKTESFCNIMQLLIGFIKKDKQMEALVEKL 1130
FF+ELS KGN IYNLLPDI+ +L + ++ E F IM+ L+ +I KDKQ E+LVEKL
Sbjct: 1142 FFNELSHKGN-AIYNLLPDIISRLSDPEGGVEEEPFHTIMKQLLSYITKDKQTESLVEKL 1200
Query: 1131 CNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDNFRNIINKS 1190
C RF RQ+ ++YC+SQL TE+G++K++++F+ + L ++SV F +I+ K
Sbjct: 1201 CQRFRTARTERQYRDLAYCMSQLPLTERGLQKMLDNFECFGDKLLDESVFSAFLSIVGKL 1260
Query: 1191 KKFAKPEVKVCIEEFEEKLNKYHTEKKD--QEATTRNAQIHQQKVNTMGNSVADRNXXXX 1248
++ AKPE K I+EFE+KL HT D +E T Q+ ++ S R
Sbjct: 1261 RRGAKPEGKAIIDEFEQKLRACHTRGMDGIEEFETGQGG-SQRALSAKKPSAVSRLQPLT 1319
Query: 1249 XXXXXXXXXX---XXXXPSAKRTNQYINNISKSQ----SDGSEEHSGASSEVTETET 1298
P +T Q + K++ SD S E S+E+TE ET
Sbjct: 1320 SVDSDNDFVTPKPRRTKPGRPQTQQRKKSQRKAKVVFLSDESSEDE-LSAEMTEEET 1375
Score = 465 (168.7 bits), Expect = 1.2e-142, Sum P(2) = 1.2e-142
Identities = 117/424 (27%), Positives = 220/424 (51%)
Query: 68 FDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSH 127
FD VYS++ +F S+ P K +E L+ V+ + LS + D DR S+H
Sbjct: 60 FDTVYSILHHFRSIEPGLKEDTLEFLKK---VVSRHSQELSSILD--DAALSGSDR-SAH 113
Query: 128 RNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQP----VNSWNWDPQRGRILNLI 183
NA K+ + LI ++ + E S + + + K+ ++W+ +R +L L+
Sbjct: 114 LNALKMNCYALIRLLESFENMTSQTSLIDLDIGGKGKRARAKATLGFDWEEERQPVLQLL 173
Query: 184 ANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLL--KDADTKDALCRIIGACATK 241
L++++ L+ S +E ++S V + + EN T+ K+ TK+A+ ++G +
Sbjct: 174 TQLLQLDIRHLWNHSAIEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVR 233
Query: 242 YHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKD 301
Y+++ + I+ ++ ++ + + AV+ Y S+ ++REIG+ P+ +D
Sbjct: 234 YNHMLSATVKIIQMLQHFEHLPPVLVTAVSLWATDYGMKSIVGEIVREIGQKCPQELSRD 293
Query: 302 TVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIE 361
T GA+ FL ELA+R+P ++ N+ +L+ H GE+Y +RNA++ + ++V + +
Sbjct: 294 TAGAKGFAAFLTELAERIPAVLMANMCILLDHLDGENYMMRNAVLAAIAEMVLQV---LN 350
Query: 362 GEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVA 421
G+ +S R T+ L+IL DV+++ RSRVLQ++A + ++ ++ + + V +A
Sbjct: 351 GDQLEESAR-ETRDQFLDILQAHGHDVNSFVRSRVLQLFARIVQQKALPLTRFQAVVALA 409
Query: 422 AGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHSESI 481
GRL DKS +V K+A+ LL L +NPF +L L + +KL + S +
Sbjct: 410 VGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDIDLAGPLQKEIQKLQEMRAQRRSAAA 469
Query: 482 TDGL 485
T L
Sbjct: 470 TAAL 473
>UNIPROTKB|F1N3G4 [details] [associations]
symbol:NCAPD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045120 "pronucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 GO:GO:0000228
GO:GO:0045120 OMA:TERQHRD InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 GeneTree:ENSGT00390000017108 GO:GO:0000796
EMBL:DAAA02014466 EMBL:DAAA02014463 EMBL:DAAA02014464
EMBL:DAAA02014465 IPI:IPI00827207 PRIDE:F1N3G4
Ensembl:ENSBTAT00000019603 ArrayExpress:F1N3G4 Uniprot:F1N3G4
Length = 1397
Score = 957 (341.9 bits), Expect = 3.6e-140, Sum P(2) = 3.6e-140
Identities = 257/823 (31%), Positives = 421/823 (51%)
Query: 508 QEQQESLTDSCLPLADEGIADKDS-SVPDV--GNLEQTRALVASLEAGLRFSKCVSSTMP 564
QE+ L + G DK S S P+ L + LV L+ FS ++ +
Sbjct: 578 QEENPQAAAGNLGPGETGCKDKPSGSEPEECSDELVKQELLVQYLQDAHSFSLQITKAIG 637
Query: 565 TLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFIT 624
+ ++M + + V+ I + QF + A + +MLPL+ S++ + +AV NA+
Sbjct: 638 IISKMMYEHTTTVVQEVIEFFVMVFQFGVPQALFGVRRMLPLIWSKEPGVRDAVLNAYRQ 697
Query: 625 IYVR-KSPVETAK------NLLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDF 677
+Y++ K AK NL L +D+++G +E I+ V K ++S + LW+
Sbjct: 698 LYLKPKGDSARAKAQTLIHNLSLLLVDASVGTIQCLEEIICEFVQKDELSPAVTQVLWER 757
Query: 678 FCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIA 737
V +P + +++ +L M A+ ++GS+L +++IG + LA+ C A
Sbjct: 758 ATEKVP-CSPLERCSSVMLLGMMARGKPEIVGSNLDTLVNIGLDEKLPPDYRLAQQVCHA 816
Query: 738 IQRLSQEDKKKL-------LLSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTI 789
I + K + L R+F L ++T G PD +W + A++ IY +
Sbjct: 817 IANILDRRKPSMGERHPPFRLPQEHRLFERLREMVTKGSIHPDPLWVPFKEAAVALIYQL 876
Query: 790 HPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAM 849
PE + +++ + + + H +PT + ++ L + +A+
Sbjct: 877 AEGPEVICARILQDCAKQALEKLEEKSDHQEAPQETPVLPTFLLMNLLS----LAGDVAL 932
Query: 850 NQLVYIESCVC-EIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGL--AASED 906
QLV++E V E+ ++++ +E+ + N+ + ++++ E+GL A ++D
Sbjct: 933 QQLVHLEQAVSGELCRRRVLREEQEHKRKEPKEKNSKS-----ESTLEEEMGLGGATADD 987
Query: 907 AKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFM 966
+ + + E E++ G K + L K C N L + PEL +A LAL +F
Sbjct: 988 TEAELIRGICELELLEG----KQTLAAFVPLLLKVCNNPGLYSN-PELSTAASLALGKFC 1042
Query: 967 IIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPS 1026
+I A +CD+ L+LLFT++E S IVRSN IA GDLA+RFPNL++PWT ++YARL+DPS
Sbjct: 1043 MISATFCDSQLRLLFTMLEKSSFPIVRSNLMIATGDLAIRFPNLVDPWTPHLYARLRDPS 1102
Query: 1027 MAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIY 1086
VRK A LV++HLIL DM+KVKG ++EMA+ + D +I+ LAK FF+ELS K N IY
Sbjct: 1103 QHVRKTAALVMTHLILKDMVKVKGQVSEMAVLLIDPAPQIAALAKNFFNELSNKAN-AIY 1161
Query: 1087 NLLPDILGKLC--NQNLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWE 1144
NLLPDI+ +L ++ E F IM+ L+ +I KDKQ E+LVEKLC RF RQ+
Sbjct: 1162 NLLPDIISRLSAPEGGVEEEPFHTIMKQLLSYITKDKQTESLVEKLCQRFRTAQTERQYR 1221
Query: 1145 YISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEE 1204
++YC+SQL TE+G++K++++F + LS++S+ F +I+ K ++ AKPE K I+E
Sbjct: 1222 DLAYCVSQLPLTERGLRKMLDNFDCFGDKLSDESIFSAFLSILGKLRRGAKPEGKAVIDE 1281
Query: 1205 FEEKLNKYHTEKKDQEATTRNAQIHQQKVNTMGNSVADRNXXXXXXXXXXXXXXXXXXPS 1264
FE+KL HT D T ++ Q N S + P
Sbjct: 1282 FEQKLRTCHTRGLD---TVEELEVGQGS-NQRAPSARKQPAAARHRHVASTASDDFVTPK 1337
Query: 1265 AKRTNQYINNISKSQSD-------GSEEHSGA--SSEVTETET 1298
+RT + N + S S+E S S+E+TE ET
Sbjct: 1338 PRRTTRQHPNTQQRASRKKLRIVFSSDESSDEELSAEMTEDET 1380
Score = 471 (170.9 bits), Expect = 3.6e-140, Sum P(2) = 3.6e-140
Identities = 124/451 (27%), Positives = 234/451 (51%)
Query: 25 NRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSLSPS 84
N+ Q +SI + PS L F +F + L +E FD +YS++ +F S+ P
Sbjct: 24 NQYVVQEVLSIRHL-PSYLKAFQ--TAFR-AQGPLAVLEH---FDTIYSILHHFRSIDPG 76
Query: 85 CKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISIVLA 144
K +E L + V+ + L + D V DR S+H NA K+ + LI ++ +
Sbjct: 77 LKEDTLEFL---IKVVSRHSQELPAILD--DAALSVSDR-SAHLNALKMNCYALIRLLES 130
Query: 145 QEFNISSNN--NPKVTASTRKKQP--VNSWNWDPQRGRILNLIANSLEINLPLLFGSSDP 200
E S + ++ RK + + ++W+ +R IL L+ L++++ L+ S
Sbjct: 131 FETTSSQTGLMDVELGGKGRKSRAKATHGFDWEEERQPILQLLTQLLQLDIRHLWNHSII 190
Query: 201 DENYLSFVVRNAFLMFENATLL--KDADTKDALCRIIGACATKYHYIEQSCASIMHLIHK 258
+E ++S V + + EN T+ K+ T++A+ ++G T+Y+++ + I+ ++
Sbjct: 191 EEEFVSLVTGCCYRLLENPTISHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQH 250
Query: 259 YDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADR 318
++ + + AV+ Y S+ ++REIG+ P+ +D GA+ FL ELA+R
Sbjct: 251 FEHLASILVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPTGAKGFAAFLTELAER 310
Query: 319 LPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAML 378
+P ++ +++ +L+ H GE+Y +RNA++ + ++V + + EA+S+ T+ L
Sbjct: 311 IPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAASRD----TRDQFL 366
Query: 379 EILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALN 438
+ L C DV+++ RSRVLQ++ + ++ ++ + + V +A GRL DKS +V KSA+
Sbjct: 367 DTLQAHCHDVNSFVRSRVLQLFTRIVQQKALPLMRFQAVVALAVGRLADKSVLVCKSAIQ 426
Query: 439 LLVMMLQHNPFGPQLRIASFEATLDEYRKKL 469
LL L +NPF +L L + +KL
Sbjct: 427 LLASFLANNPFSCKLSDTDLAGPLQKETQKL 457
Score = 42 (19.8 bits), Expect = 4.1e-39, Sum P(2) = 4.1e-39
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 1284 EEHSGASSEVTETETGDIEVQSPRVMMKGTKSRAKKSTL 1322
+E G S V ETET + EV+ R+ K+ K++ +
Sbjct: 498 QEGEGMSEGVAETETPE-EVEG-RIRQLLAKASYKQAVI 534
>UNIPROTKB|E2RHZ0 [details] [associations]
symbol:NCAPD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 CTD:9918 KO:K06677
OMA:TERQHRD InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 EMBL:AAEX03015287 RefSeq:XP_534910.3
Ensembl:ENSCAFT00000024019 GeneID:477715 KEGG:cfa:477715
Uniprot:E2RHZ0
Length = 1400
Score = 965 (344.8 bits), Expect = 1.5e-139, Sum P(2) = 1.5e-139
Identities = 255/795 (32%), Positives = 422/795 (53%)
Query: 535 DVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQID 594
D L + LV L+ FS ++ + + ++M ++ + V+ I + QF +
Sbjct: 608 DNDELVKQEMLVQYLQDAYSFSLKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVP 667
Query: 595 GAEACLHKMLPLVLSQDKSIYEAVENAFITIYVR-KSPVETAK------NLLNLAIDSNI 647
A + +MLPL+ S++ + EAV NA+ +Y+ K AK NL +L +D+++
Sbjct: 668 QALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQNLSSLLVDASV 727
Query: 648 GDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAV 707
G +E I+ V K ++ + LW+ V + E+ + + +L M A+ +
Sbjct: 728 GTIQCLEEILCEFVQKDELKPAVTQVLWERATQKVPCSPLERCSSVI-LLGMMARGKPEI 786
Query: 708 LGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLL-------LSYGSRVFAT 760
+GS+L +++IG + LA+ C AI LS + K L L R+F
Sbjct: 787 VGSNLDTLVNIGLDEKFPQDYRLAQQVCHAIANLSDKRKPSLSKRHPPFRLPQEHRLFER 846
Query: 761 LESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHN 819
L +IT GF PD +W + A++ IY + P+ + +++ + +G +
Sbjct: 847 LREVITRGFVHPDPLWIPFKEVAVTLIYQLAEGPDVICAQILQGCAKQALENLGEKSTTQ 906
Query: 820 GIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVC-EIRKQKIKKEKMIADDQN 878
+PT + ++ L + +A+ QLV++E V E+ ++++ +E+ ++
Sbjct: 907 EGPKDTPVLPTFLLMNLLS----LAGDVALQQLVHLEQAVSGELCRRRVLQEEQEQKTKD 962
Query: 879 IHSNNNTNGDLPKDTSINAELGLAAS--EDAKLDTLSEKAEKEIISGGSSQKNLIGHCAS 936
N ++ +T++ E+GLA + +D + + + EKE++ G K ++
Sbjct: 963 PKEKNTSS-----ETTMEEEMGLAGATADDTEAELIRGICEKELLDG----KQVLAAFVP 1013
Query: 937 FLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNC 996
L K C N L + PEL A+A LAL +F +I A +CD+ L+LLFT++E S IVRSN
Sbjct: 1014 LLLKVCNNPGLYSN-PELSAAASLALGKFCMISATFCDSQLRLLFTMLEKSSLPIVRSNL 1072
Query: 997 TIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMA 1056
IA GDLA+RFPNL++PWT ++YARL+DP+ VR+ A LV++HLIL DM+KVKG ++EMA
Sbjct: 1073 MIATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRRTAGLVMTHLILKDMVKVKGQVSEMA 1132
Query: 1057 IRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQN--LKTESFCNIMQLLI 1114
+ + D +I+ LAK FF+ELS KGN IYNLLPDI+ +L + ++ E F IM+ L+
Sbjct: 1133 VLLIDPVPQITALAKNFFNELSHKGN-AIYNLLPDIISRLSDPEGGVEEEPFHIIMKQLL 1191
Query: 1115 GFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHAL 1174
+I KDKQ E+LVEKLC RF RQ+ ++YC+SQL TE+G++K++++F + L
Sbjct: 1192 SYITKDKQTESLVEKLCQRFRTARTERQYRDLAYCVSQLPLTERGLRKMLDNFDCFGDKL 1251
Query: 1175 SEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKDQEATTRNAQIHQQKV- 1233
S++S+ +F +++ K ++ AKPE K I+EFE+KL HT D Q Q+
Sbjct: 1252 SDESIFGDFLSVVGKLRRGAKPEGKAIIDEFEQKLRVCHTRGLDAVEDLEVGQRGSQRAP 1311
Query: 1234 NTMGNSVADRNXXXXXXXXXXXXXXXXXXPSAKRT-NQYINN---ISKSQ------SDGS 1283
+T S + P + RT +++ N + K + SD S
Sbjct: 1312 STKKPSTVSKRHQHLASAASSDSDFVT--PKSCRTAHRHPNTQQRVFKKKPRIVFSSDES 1369
Query: 1284 EEHSGASSEVTETET 1298
E S+E+TE ET
Sbjct: 1370 SEEE-LSAEMTEEET 1383
Score = 452 (164.2 bits), Expect = 1.5e-139, Sum P(2) = 1.5e-139
Identities = 121/463 (26%), Positives = 239/463 (51%)
Query: 25 NRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSLSPS 84
N+ Q +SI + PS+L F +F + L +E FD VYS++ +F S+ P
Sbjct: 24 NQYVVQEILSIKHL-PSQLRAFQ--AAFR-AQGSLAMLEH---FDTVYSILHHFRSIDPG 76
Query: 85 CKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISIVLA 144
+ +E L + V+ + L + D V DR S+H NA K+ + LI ++ +
Sbjct: 77 LQEDTLEFL---IKVVSRHSQELPAILD--DAALSVSDR-SAHLNALKMNCYALIRLLES 130
Query: 145 QEFNISSNNNPKVTASTRKK---QPVNSWNWDPQRGRILNLIANSLEINLPLLFGSSDPD 201
E S + + KK + + ++W+ +R IL L+ L++++ L+ S +
Sbjct: 131 FETMSSQTSLRDLDLGKGKKARAKTAHGFDWEEERQPILQLLTQLLQLDIRHLWNHSIIE 190
Query: 202 ENYLSFVVRNAFLMFENATLL--KDADTKDALCRIIGACATKYHYIEQSCASIMHLIHKY 259
E ++S V + + EN T+ K+ T++A+ R++G T+Y+++ + I+ ++ +
Sbjct: 191 EEFVSLVTGCCYRLLENPTISHQKNRPTREAITRLLGVALTRYNHMLSASVKIIQMLQHF 250
Query: 260 DFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADRL 319
+ + + AV+ Y S+ ++REIG+ P+ +D VG + FL ELA+R+
Sbjct: 251 EHLASVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPVGTKGFAAFLTELAERI 310
Query: 320 PKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAMLE 379
P ++ +++ +L+ + GE+Y +RNA++ + ++V + + G+ ++ R T+ L+
Sbjct: 311 PAILMSSMCILLDYLDGENYMMRNAVLAAMAEMVLQV---LNGDQLEEAAR-DTRDQFLD 366
Query: 380 ILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNL 439
L DV+++ RSRVLQ++ + ++ ++ + + V +A GRL DKS +V K+A+ L
Sbjct: 367 TLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLVCKNAIQL 426
Query: 440 LVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHSESIT 482
L L +NPF +L L + +KL + + +++
Sbjct: 427 LASFLANNPFSCKLSDTDLAGPLKKETQKLQEMRAQRQAAAVS 469
Score = 38 (18.4 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 1195 KPEVKVCIEEF-EEKLNKYHTEKKDQEATT--RNAQIHQQK 1232
KP + +E EE+L+ TE++ + TT R A + + +
Sbjct: 1359 KPRIVFSSDESSEEELSAEMTEEETPKKTTPIRRAPLRRHR 1399
>UNIPROTKB|Q15021 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0051301 "cell division" evidence=IEA]
[GO:0045120 "pronucleus" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IDA;NAS] [GO:0000797 "condensin
core heterodimer" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0042393 "histone binding" evidence=IDA;NAS] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000796 "condensin complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 SUPFAM:SSF48371 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 EMBL:CH471116 GO:GO:0042393
GO:GO:0007076 GO:GO:0045120 EMBL:AC006064 EMBL:D63880 EMBL:BC028182
IPI:IPI00299524 RefSeq:NP_055680.3 UniGene:Hs.5719
ProteinModelPortal:Q15021 SMR:Q15021 IntAct:Q15021
MINT:MINT-3030640 STRING:Q15021 PhosphoSite:Q15021 DMDM:259016362
PaxDb:Q15021 PRIDE:Q15021 Ensembl:ENST00000315579 GeneID:9918
KEGG:hsa:9918 UCSC:uc001qoo.2 CTD:9918 GeneCards:GC12P006602
H-InvDB:HIX0201829 HGNC:HGNC:24305 HPA:CAB012423 HPA:HPA036947
HPA:HPA037363 neXtProt:NX_Q15021 PharmGKB:PA162397021
eggNOG:COG5098 HOGENOM:HOG000068001 HOVERGEN:HBG038048
InParanoid:Q15021 KO:K06677 OMA:TERQHRD PhylomeDB:Q15021
ChiTaRS:NCAPD2 GenomeRNAi:9918 NextBio:37412 ArrayExpress:Q15021
Bgee:Q15021 CleanEx:HS_NCAPD2 Genevestigator:Q15021 GO:GO:0000797
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922 Uniprot:Q15021
Length = 1401
Score = 968 (345.8 bits), Expect = 6.6e-139, Sum P(2) = 6.6e-139
Identities = 256/791 (32%), Positives = 412/791 (52%)
Query: 537 GN--LEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQID 594
GN L + LV L+ FS+ ++ + + ++M ++ + V+ I + QF +
Sbjct: 610 GNDELVKQEMLVQYLQDAYSFSRKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVP 669
Query: 595 GAEACLHKMLPLVLSQDKSIYEAVENAFITIYVR-KSPVETAK------NLLNLAIDSNI 647
A + +MLPL+ S++ + EAV NA+ +Y+ K AK NL L +D+++
Sbjct: 670 QALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQNLSLLLVDASV 729
Query: 648 GDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAV 707
G +E I+ V K ++ + LW+ V+ P + +++ +L M A+ +
Sbjct: 730 GTIQCLEEILCEFVQKDELKPAVTQLLWERATEKVA-CCPLERCSSVMLLGMMARGKPEI 788
Query: 708 LGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFAT 760
+GS+L ++ IG + LA+ C AI +S K L L R+F
Sbjct: 789 VGSNLDTLVSIGLDEKFPQDYRLAQQVCHAIANISDRRKPSLGKRHPPFRLPQEHRLFER 848
Query: 761 LESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHN 819
L +T GF PD +W + A++ IY + PE + +++ + + EE
Sbjct: 849 LRETVTKGFVHPDPLWIPFKEVAVTLIYQLAEGPEVICAQILQGCAKQALEKL--EEKRT 906
Query: 820 GIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVC-EIRKQKIKKEKMIADDQN 878
+ S P + L L + +A+ QLV++E V E+ ++++ +E+ ++
Sbjct: 907 SQEDPKES-PAMLPTFLLMNLLSLAGDVALQQLVHLEQAVSGELCRRRVLREEQEHKTKD 965
Query: 879 IHSNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCAS 936
N ++ +T++ ELGL A ++D + + + E E++ G K +
Sbjct: 966 PKEKNTSS-----ETTMEEELGLVGATADDTEAELIRGICEMELLDG----KQTLAAFVP 1016
Query: 937 FLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNC 996
L K C N L + P+L A+A LAL +F +I A +CD+ L+LLFT++E SP IVRSN
Sbjct: 1017 LLLKVCNNPGLYSN-PDLSAAASLALGKFCMISATFCDSQLRLLFTMLEKSPLPIVRSNL 1075
Query: 997 TIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMA 1056
+A GDLA+RFPNL++PWT ++YARL+DP+ VRK A LV++HLIL DM+KVKG ++EMA
Sbjct: 1076 MVATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVKVKGQVSEMA 1135
Query: 1057 IRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQNL--KTESFCNIMQLLI 1114
+ + D + +I+ LAK FF+ELS KGN IYNLLPDI+ +L + L + E F IM+ L+
Sbjct: 1136 VLLIDPEPQIAALAKNFFNELSHKGN-AIYNLLPDIISRLSDPELGVEEEPFHTIMKQLL 1194
Query: 1115 GFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHAL 1174
+I KDKQ E+LVEKLC RF RQ ++YC+SQL TE+G++K++++F + L
Sbjct: 1195 SYITKDKQTESLVEKLCQRFRTSRTERQQRDLAYCVSQLPLTERGLRKMLDNFDCFGDKL 1254
Query: 1175 SEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKDQEATTRNAQIHQQKVN 1234
S++S+ F +++ K ++ AKPE K I+EFE+KL HT D Q Q+
Sbjct: 1255 SDESIFSAFLSVVGKLRRGAKPEGKAIIDEFEQKLRACHTRGLDGIKELEIGQAGSQRAP 1314
Query: 1235 TMGN-SVADRNXXXXXXXXXXXXXXXXXXPSAKRTNQYINNISKSQ------SDGSEEHS 1287
+ S R + +R SK + SD S E
Sbjct: 1315 SAKKPSTGSRYQPLASTASDNDFVTPEPRRTTRRHPNTQQRASKKKPKVVFSSDESSEED 1374
Query: 1288 GASSEVTETET 1298
S+E+TE ET
Sbjct: 1375 -LSAEMTEDET 1384
Score = 440 (159.9 bits), Expect = 6.6e-139, Sum P(2) = 6.6e-139
Identities = 107/408 (26%), Positives = 214/408 (52%)
Query: 68 FDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSH 127
FD +YS++ +F S+ P K ++ L + V+ + L + D DR ++H
Sbjct: 60 FDTIYSILHHFRSIDPGLKEDTLQFL---IKVVSRHSQELPAILD--DTTLSGSDR-NAH 113
Query: 128 RNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQP----VNSWNWDPQRGRILNLI 183
NA K+ + LI ++ + E S N + + K+ + ++W+ +R IL L+
Sbjct: 114 LNALKMNCYALIRLLESFETMASQTNLVDLDLGGKGKKARTKAAHGFDWEEERQPILQLL 173
Query: 184 ANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATL--LKDADTKDALCRIIGACATK 241
L++++ L+ S +E ++S V + + EN T+ K+ T++A+ ++G T+
Sbjct: 174 TQLLQLDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTINHQKNRPTREAITHLLGVALTR 233
Query: 242 YHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKD 301
Y+++ + I+ ++ ++ + + AV+ Y S+ ++REIG+ P+ +D
Sbjct: 234 YNHMLSATVKIIQMLQHFEHLAPVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRD 293
Query: 302 TVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIE 361
G + FL ELA+R+P ++ +++ +L+ H GE+Y +RNA++ + ++V + +
Sbjct: 294 PSGTKGFAAFLTELAERVPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQ 353
Query: 362 GEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVA 421
EA+++ T+ L+ L DV+++ RSRVLQ++ + ++ ++ + + V +A
Sbjct: 354 LEAAARD----TRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALA 409
Query: 422 AGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKL 469
GRL DKS +V K+A+ LL L +NPF +L A L + +KL
Sbjct: 410 VGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDADLAGPLQKETQKL 457
>RGD|1562596 [details] [associations]
symbol:Ncapd2 "non-SMC condensin I complex, subunit D2"
species:10116 "Rattus norvegicus" [GO:0000228 "nuclear chromosome"
evidence=IEA;ISO] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000796 "condensin complex" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0045120
"pronucleus" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 RGD:1562596 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007076 GO:GO:0000228 GO:GO:0045120 CTD:9918 KO:K06677
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 OrthoDB:EOG4W6NV7 GO:GO:0000796
IPI:IPI00198515 RefSeq:XP_001065923.3 RefSeq:XP_575668.4
UniGene:Rn.7870 Ensembl:ENSRNOT00000025889 GeneID:362438
KEGG:rno:362438 UCSC:RGD:1562596 Uniprot:D3ZHP6
Length = 1390
Score = 946 (338.1 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 245/750 (32%), Positives = 407/750 (54%)
Query: 497 EVDDLNAEVVVQEQQESLTDSCLPLADEGIA-DKDS-SVPDV-GN-----LEQTRALVAS 548
E D LN V+ + E+ T D G+ KDS SVP+ G+ L + LV
Sbjct: 554 EKDFLNLLGVIFKGPEASTHESPRHTDPGLTGSKDSPSVPEPEGSQRDDELLKQEMLVQY 613
Query: 549 LEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVL 608
L+ FS+ ++ + + ++M ++ + V+ I + QF + A + +MLPL+
Sbjct: 614 LQDAYSFSQKITEAIGVISKMMYENTTTVVQEVIEFFVMVFQFGVPQALFGVRRMLPLIW 673
Query: 609 SQDKSIYEAVENAFITIYVRK---SPVETAKNLL-NLA---IDSNIGDQAAMEFIVGTLV 661
S++ + EAV NA+ +Y+ S TA+ L+ NL+ +D+++G +E I+ V
Sbjct: 674 SKELGVREAVLNAYRQLYLSPKGDSARATAQALIQNLSLLLVDASVGTIQCLEEILCEFV 733
Query: 662 SKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFG 721
K ++ + I LW+ V +P + +++ +L M A+ ++GS+L ++ +G
Sbjct: 734 QKDEIKPAVIQLLWERATEKVP-CSPLERCSSVMLLGMMARGKPEIVGSNLDTLVKVGLD 792
Query: 722 RWAKVEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFATLESLIT-GFWLPDN 773
+ LA+ C+AI +S K L L ++F L+ ++T GF PD
Sbjct: 793 EKFPQDYRLAQQVCLAIANISDRRKPSLGERHPPFRLPQEHKLFERLQEMVTKGFAHPDP 852
Query: 774 IWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQ 833
W + A++ Y + P+ + +++ + + +PT +
Sbjct: 853 FWIPFKEVAVTLTYQLAEGPDVICSQMLQGCAKQALEKLEKNTTEGDSKETAPKLPTFLL 912
Query: 834 VSKLGRYLFILSHIAMNQLVYIESCVC-EIRKQKIKKEKMIADDQNIHSNNNTNGDLPKD 892
++ L + +A+ QLV++E V E+ ++++ +E+ + T+ +
Sbjct: 913 MNLLS----LAGDVALQQLVHLEQAVSGELGRRRVLREEQ-EHRTKVPKEKTTSSE---- 963
Query: 893 TSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNK 950
T++ ELGL A ++D + + + EKE++ G +Q ++ L K C N +
Sbjct: 964 TTMEEELGLVGATADDTEAELVRSICEKELLDG--TQ--VLAAFVPLLLKVCNNPGAYSN 1019
Query: 951 YPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNL 1010
PEL A+A LAL +F +I A +CD+ L+LLFT++E S VRSN +A GDLA+RFPNL
Sbjct: 1020 -PELSAAASLALGKFCMISAPFCDSQLRLLFTMLEKSSLPTVRSNLMVATGDLAIRFPNL 1078
Query: 1011 LEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLA 1070
++PWT ++YARL+DP+ VR+ A LV++HLIL DM+KVKG ++EMA+ + D +I+ LA
Sbjct: 1079 VDPWTPHLYARLRDPAQQVRRTAGLVMTHLILKDMVKVKGQVSEMAVLLIDPVPQIAALA 1138
Query: 1071 KLFFHELSKKGNNPIYNLLPDILGKLCNQN--LKTESFCNIMQLLIGFIKKDKQMEALVE 1128
K FF+ELS KGN IYNLLPDI+ +L + + E F IM+ L+ +I KDKQ E+LVE
Sbjct: 1139 KNFFNELSHKGN-AIYNLLPDIISRLSDPEGGVGEEPFHTIMKQLLSYITKDKQTESLVE 1197
Query: 1129 KLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDNFRNIIN 1188
KLC RF RQ+ ++YC+SQL TE+G+ K++++F + L ++SV F +I+
Sbjct: 1198 KLCQRFRTARTERQYRDLAYCVSQLPLTERGLHKMLDNFDCFGDKLIDESVFSAFLSIVG 1257
Query: 1189 KSKKFAKPEVKVCIEEFEEKLNKYHTEKKD 1218
K ++ AKPE K I+EFE+KL HT D
Sbjct: 1258 KLRRGAKPEGKAVIDEFEQKLRACHTRGMD 1287
Score = 452 (164.2 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 134/515 (26%), Positives = 258/515 (50%)
Query: 66 DLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLS 125
D FD +YS+I +F S+ P K +E L + V+ + LS + D DR S
Sbjct: 58 DHFDTIYSIIHHFRSIEPGLKEDTLEFL---MKVVSCHSQELSSILD--DAALSGSDR-S 111
Query: 126 SHRNAFKIYTFFLISIVLAQEFNISSNN---NPKVTASTRKKQPVNSWN--WDPQRGRIL 180
+H NA K+ + LI ++ + E N++S + + +K + + W+ +R +L
Sbjct: 112 AHLNALKMNCYALIRLLESFE-NMTSQTGLIDLDIGGKGKKARAKTALGFVWEEERQPVL 170
Query: 181 NLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLL--KDADTKDALCRIIGAC 238
L+ L++++ L+ S +E ++S V + + EN T+ K+ TK+A+ ++G
Sbjct: 171 ELLTQLLQLDIRHLWSHSVIEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVA 230
Query: 239 ATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAY 298
+Y+++ + I+ ++ ++ + + AV Y S+ ++REIG+ P+
Sbjct: 231 LVRYNHMLSATVKIIQMLQHFEHLPSVLVAAVTLWATDYGMKSIVGEIVREIGQKCPQEM 290
Query: 299 VKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFK 358
+DT GA+ FL ELA+R+P + +++ +L+ H GE+Y +RNA++ + +++ +
Sbjct: 291 SRDTAGAKGFAAFLTELAERIPAALMSSMCMLLDHLDGENYMMRNAVLAAMAEMILQV-- 348
Query: 359 DIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVA 418
+ G+ +S R T+ L+IL DV+++ RSRVLQ++ + ++ ++ + + V
Sbjct: 349 -LNGDQLEESAR-ETRDQFLDILQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVV 406
Query: 419 EVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHS 478
+A GRL DKS +V K+A+ LL L +NPF +L L + +KL + +
Sbjct: 407 ALAVGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDTDLAGPLQKEIQKLQEMRAQRRT 466
Query: 479 ESITDGLPSDRGTCNGDGEVDDLNAEVVVQEQQESLTDSCLPLADEGIADKDSSVPDVGN 538
+ + L S+ + + +L + V +Q L A++ IAD +++ G
Sbjct: 467 AAASAALDSEE---EWEAMLPELKSTV---QQLLKLPQE---EAEQQIADGETAEEVKGR 517
Query: 539 LEQT-------RALVASLEAGLRF--SKCVSSTMP 564
+ Q +A++ + EA RF S+ S T P
Sbjct: 518 IHQLLARASYKQAILLTREATSRFQESEPFSHTEP 552
>UNIPROTKB|F5GZJ1 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 EMBL:AC006064
HGNC:HGNC:24305 ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 IPI:IPI01014221 ProteinModelPortal:F5GZJ1 SMR:F5GZJ1
Ensembl:ENST00000545962 UCSC:uc010sfd.1 ArrayExpress:F5GZJ1
Bgee:F5GZJ1 Uniprot:F5GZJ1
Length = 1356
Score = 968 (345.8 bits), Expect = 3.8e-136, Sum P(2) = 3.8e-136
Identities = 256/791 (32%), Positives = 412/791 (52%)
Query: 537 GN--LEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQID 594
GN L + LV L+ FS+ ++ + + ++M ++ + V+ I + QF +
Sbjct: 565 GNDELVKQEMLVQYLQDAYSFSRKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVP 624
Query: 595 GAEACLHKMLPLVLSQDKSIYEAVENAFITIYVR-KSPVETAK------NLLNLAIDSNI 647
A + +MLPL+ S++ + EAV NA+ +Y+ K AK NL L +D+++
Sbjct: 625 QALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQNLSLLLVDASV 684
Query: 648 GDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAV 707
G +E I+ V K ++ + LW+ V+ P + +++ +L M A+ +
Sbjct: 685 GTIQCLEEILCEFVQKDELKPAVTQLLWERATEKVA-CCPLERCSSVMLLGMMARGKPEI 743
Query: 708 LGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFAT 760
+GS+L ++ IG + LA+ C AI +S K L L R+F
Sbjct: 744 VGSNLDTLVSIGLDEKFPQDYRLAQQVCHAIANISDRRKPSLGKRHPPFRLPQEHRLFER 803
Query: 761 LESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHN 819
L +T GF PD +W + A++ IY + PE + +++ + + EE
Sbjct: 804 LRETVTKGFVHPDPLWIPFKEVAVTLIYQLAEGPEVICAQILQGCAKQALEKL--EEKRT 861
Query: 820 GIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVC-EIRKQKIKKEKMIADDQN 878
+ S P + L L + +A+ QLV++E V E+ ++++ +E+ ++
Sbjct: 862 SQEDPKES-PAMLPTFLLMNLLSLAGDVALQQLVHLEQAVSGELCRRRVLREEQEHKTKD 920
Query: 879 IHSNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCAS 936
N ++ +T++ ELGL A ++D + + + E E++ G K +
Sbjct: 921 PKEKNTSS-----ETTMEEELGLVGATADDTEAELIRGICEMELLDG----KQTLAAFVP 971
Query: 937 FLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNC 996
L K C N L + P+L A+A LAL +F +I A +CD+ L+LLFT++E SP IVRSN
Sbjct: 972 LLLKVCNNPGLYSN-PDLSAAASLALGKFCMISATFCDSQLRLLFTMLEKSPLPIVRSNL 1030
Query: 997 TIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMA 1056
+A GDLA+RFPNL++PWT ++YARL+DP+ VRK A LV++HLIL DM+KVKG ++EMA
Sbjct: 1031 MVATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVKVKGQVSEMA 1090
Query: 1057 IRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQNL--KTESFCNIMQLLI 1114
+ + D + +I+ LAK FF+ELS KGN IYNLLPDI+ +L + L + E F IM+ L+
Sbjct: 1091 VLLIDPEPQIAALAKNFFNELSHKGN-AIYNLLPDIISRLSDPELGVEEEPFHTIMKQLL 1149
Query: 1115 GFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHAL 1174
+I KDKQ E+LVEKLC RF RQ ++YC+SQL TE+G++K++++F + L
Sbjct: 1150 SYITKDKQTESLVEKLCQRFRTSRTERQQRDLAYCVSQLPLTERGLRKMLDNFDCFGDKL 1209
Query: 1175 SEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKDQEATTRNAQIHQQKVN 1234
S++S+ F +++ K ++ AKPE K I+EFE+KL HT D Q Q+
Sbjct: 1210 SDESIFSAFLSVVGKLRRGAKPEGKAIIDEFEQKLRACHTRGLDGIKELEIGQAGSQRAP 1269
Query: 1235 TMGN-SVADRNXXXXXXXXXXXXXXXXXXPSAKRTNQYINNISKSQ------SDGSEEHS 1287
+ S R + +R SK + SD S E
Sbjct: 1270 SAKKPSTGSRYQPLASTASDNDFVTPEPRRTTRRHPNTQQRASKKKPKVVFSSDESSEED 1329
Query: 1288 GASSEVTETET 1298
S+E+TE ET
Sbjct: 1330 -LSAEMTEDET 1339
Score = 408 (148.7 bits), Expect = 3.8e-136, Sum P(2) = 3.8e-136
Identities = 95/354 (26%), Positives = 191/354 (53%)
Query: 122 DRLSSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQP----VNSWNWDPQRG 177
DR ++H NA K+ + LI ++ + E S N + + K+ + ++W+ +R
Sbjct: 64 DR-NAHLNALKMNCYALIRLLESFETMASQTNLVDLDLGGKGKKARTKAAHGFDWEEERQ 122
Query: 178 RILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATL--LKDADTKDALCRII 235
IL L+ L++++ L+ S +E ++S V + + EN T+ K+ T++A+ ++
Sbjct: 123 PILQLLTQLLQLDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTINHQKNRPTREAITHLL 182
Query: 236 GACATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNP 295
G T+Y+++ + I+ ++ ++ + + AV+ Y S+ ++REIG+ P
Sbjct: 183 GVALTRYNHMLSATVKIIQMLQHFEHLAPVLVAAVSLWATDYGMKSIVGEIVREIGQKCP 242
Query: 296 KAYVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAK 355
+ +D G + FL ELA+R+P ++ +++ +L+ H GE+Y +RNA++ + ++V +
Sbjct: 243 QELSRDPSGTKGFAAFLTELAERVPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQ 302
Query: 356 AFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWN 415
+ EA+++ T+ L+ L DV+++ RSRVLQ++ + ++ ++ + +
Sbjct: 303 VLSGDQLEAAARD----TRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQ 358
Query: 416 EVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKL 469
V +A GRL DKS +V K+A+ LL L +NPF +L A L + +KL
Sbjct: 359 AVVALAVGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDADLAGPLQKETQKL 412
>ZFIN|ZDB-GENE-050506-59 [details] [associations]
symbol:ncapd2 "non-SMC condensin I complex, subunit
D2" species:7955 "Danio rerio" [GO:0007067 "mitosis" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IGI;IMP] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
ZFIN:ZDB-GENE-050506-59 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0000070
GO:GO:0007076 CTD:9918 eggNOG:COG5098 HOGENOM:HOG000068001
HOVERGEN:HBG038048 KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 OrthoDB:EOG4W6NV7 EMBL:BC133123 IPI:IPI00933758
RefSeq:NP_001155974.1 UniGene:Dr.150361 STRING:A2RV05 GeneID:552978
KEGG:dre:552978 InParanoid:A2RV05 NextBio:20879901
ArrayExpress:A2RV05 Uniprot:A2RV05
Length = 1414
Score = 849 (303.9 bits), Expect = 3.7e-122, Sum P(2) = 3.7e-122
Identities = 249/812 (30%), Positives = 418/812 (51%)
Query: 453 LRIASFEATLDEYRKKLNGLEPDIHSESITDGLPSDRGTCNGDGEVDDLNAEVVVQEQQE 512
++IA F +Y+K + GL HS SD N + ++ L A + ++E
Sbjct: 552 VQIAQFLRE-SKYKKAV-GLCMRAHSLFPESSFFSDLADLNAESLINTL-ATLFKGPEEE 608
Query: 513 SLTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMAS 572
T + K+S + L++ LV L+ F+ V + + ++
Sbjct: 609 --TPEAVSTDAPPTPQKESEGRE-SELKKQEMLVQYLKDTECFALQVERAIAVINNMLYW 665
Query: 573 SSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYVRKSPV 632
+ + V+ + + +F + + + KMLPLV S D +I +AV A+ +Y+ +
Sbjct: 666 KTTTIVQEAVQFCVTAFEFSVADSVCGVRKMLPLVWSTDVTIKDAVIQAYRRLYLNPNGE 725
Query: 633 ET-AK------NLLNLAIDSNIGDQAAMEFIVGTLVS-KGDVSMSTISALWDFFCFNVSG 684
T AK +L +L +D+++G +E IV S + + S + LW+ F SG
Sbjct: 726 NTRAKAHTLVDSLSDLMVDASLGTIQCLEEIVQEFFSSESALQTSVMQVLWERF----SG 781
Query: 685 TTPEKS---RAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRL 741
K+ RAA+ +L MA ++ V+ S+L + + G + LLAR I I +
Sbjct: 782 KRETKALHRRAAVLLLGMAGRAEREVVLSNLDTLCSVALGEKVAEDYLLARDTLITITNI 841
Query: 742 SQEDKKK----LLLSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETL 796
+ ++ L +F+ L I G D W T ++A+ IY + +P+ L
Sbjct: 842 TDHVRQSKGVPFRLPMDHHLFSCLSQAIADGVVQSDPHWQTFMEQAVRLIYFLAESPDQL 901
Query: 797 AVDLVKKSLSAVFDYV--GGEEPHNGIDCVGTSMPTSVQVS--KLGRYLFILSHIAMNQL 852
L+++S + + + GGE + + G S + QV+ L + L + +A Q+
Sbjct: 902 CPRLLQRSARLLLEQITEGGEPDQSQLQ-EGASQVSEEQVNCVSLAQVLSLCGAVAFWQV 960
Query: 853 VYIESCVC-EIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGL--AASEDAKL 909
++E V E+R+++ +KE+ ++ S N D+ + ELGL A++ED +
Sbjct: 961 SHLERSVSSELRRRRGEKEEKEEKEKAPASKKGAN-----DSCVEEELGLVGASAEDTEA 1015
Query: 910 DTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKY--PELQASAMLALCRFMI 967
+ + + E E+++ G N++ L K C S KY P+L +A LAL ++M+
Sbjct: 1016 EFIRKICETELLAEG----NMLSAFLPLLVKVC---SSPGKYSHPQLTTAACLALSQYMM 1068
Query: 968 IDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSM 1027
I C +++LLFTV+E S +VR+N +ALGDL VRFPN+LEPWT N+YARL D +
Sbjct: 1069 ISPAVCKDHIRLLFTVLEKSQLPVVRANTIVALGDLTVRFPNILEPWTPNLYARLSDENA 1128
Query: 1028 AVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYN 1087
+VR A+ VL+ L+L D+MKVKG ++E+A+ + D + I++LA FF+ELS K +N IYN
Sbjct: 1129 SVRLTAITVLTQLVLKDVMKVKGQVSEVAVLLLDPEPHIASLALNFFNELSAK-DNAIYN 1187
Query: 1088 LLPDILGKLCN--QNLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEY 1145
LLPDI+ +L + + + E F IM+ L +I K++Q E+LVEKLC RF RQW
Sbjct: 1188 LLPDIISRLSDPERGMNEEDFNTIMKQLFSYITKERQTESLVEKLCQRFRTAKTERQWAD 1247
Query: 1146 ISYCLSQLAFTEKGMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEF 1205
++ LS L+ E+G KKL E + Y L+E V +I K ++ AKP+ K +E++
Sbjct: 1248 LAVSLSLLSVCERGFKKLQECWDCYSDKLAEPGVYQPLLSIAAKLRRRAKPQFKAQVEDY 1307
Query: 1206 EEKLNKYHT--------EKKDQEATTRNAQIH 1229
E++L HT E+++Q+A T++ +H
Sbjct: 1308 EKRLTAVHTKGLENVENEEREQQADTQSQNLH 1339
Score = 432 (157.1 bits), Expect = 3.7e-122, Sum P(2) = 3.7e-122
Identities = 134/520 (25%), Positives = 246/520 (47%)
Query: 25 NRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSLSPS 84
N+ Q+ +S + PS + F + S L CI E FD YS++++ ++ +
Sbjct: 56 NQYVVQDVLSAKQL-PSHINSFKAAMR---SQGPL-CILEH--FDTAYSVLKHCRTVDVA 108
Query: 85 CKLSLVESLRS---NLSVLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISI 141
K ++E L LSV LP + +S +DR NA K+ F L
Sbjct: 109 VKEDILELLIQVVRGLSVSLPTLLMAGTLS--------AVDR-KQQLNAVKMSVFLLCK- 158
Query: 142 VLAQEFNISSNNNPKVTAST--RKKQPV---NSWNWDPQRGRILNLIANSLEINLPLLFG 196
L + SN VTA + RKK + WD +R +L + L++++ L+
Sbjct: 159 -LTEMLESDSNRETIVTAPSKGRKKDKAAGKDLLQWDSERDTVLQCLTQLLQLDIRTLWS 217
Query: 197 SSDPDENYLSFVVRNAFLMFENATL--LKDADTKDALCRIIGACATKYHYIEQSCASIMH 254
S +E ++S V + + EN T+ +K+ T+DA+ ++G KY+++ +C ++
Sbjct: 218 LSLVEEEFVSCVTCCCYKLLENPTISHMKNKSTRDAIIHVLGIMVKKYNHMLGACVKVIQ 277
Query: 255 LIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVE 314
L+ ++ + A AVA +Y ++ ++REIG+ + + ++ G + FL E
Sbjct: 278 LLQHFEQLASVCAQAVAAWSTEYGVKAIVGEIMREIGQKSSEELAREGSGVKAFSSFLSE 337
Query: 315 LADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTK 374
L +P+ + NI VL+ H GES +R A+ +LG+++ + + G+ S R ++
Sbjct: 338 LGTLVPETMIPNISVLLTHLEGESPSLRVAVCEILGEVLVRV---LSGDKLDDSARA-SR 393
Query: 375 QAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRK 434
L+ L E D ++ R+RVLQV+ + ++ + + EV E+ GRL DKS V K
Sbjct: 394 DRFLDTLQEHIHDAHSHVRARVLQVYTRIVNSKALPLSRYTEVMELTVGRLGDKSVNVCK 453
Query: 435 SALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHSESITDGLPSDRGTCNG 494
SA+ LL + HNP+ +L + L++ KL + D +E + + + +
Sbjct: 454 SAIQLLAAFIAHNPYSCKLSSVDLKKPLEKEMAKLKEMR-DAQAEQVPVAVITATDLWDA 512
Query: 495 DGEVDDLNAEVVVQEQQESLTDSCLP-LADEGIADKDSSV 533
+L + +++ E D A+E +D+D++V
Sbjct: 513 MKPEVELTVKALLEPGSEEEDDEEEEEAAEEDRSDRDTAV 552
Score = 38 (18.4 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 7/27 (25%), Positives = 18/27 (66%)
Query: 1195 KPEVKVCIEEFEEKLNKYHTEKKDQEA 1221
KPEV++ ++ E ++ +++++EA
Sbjct: 514 KPEVELTVKALLEPGSEEEDDEEEEEA 540
>UNIPROTKB|F1NEH3 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9031
"Gallus gallus" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0045120
"pronucleus" evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076
GO:GO:0000228 GO:GO:0045120 OMA:TERQHRD InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 GeneTree:ENSGT00390000017108
GO:GO:0000796 EMBL:AADN02061150 EMBL:AADN02061151 EMBL:AADN02061152
IPI:IPI00585030 Ensembl:ENSGALT00000023320 Uniprot:F1NEH3
Length = 1393
Score = 835 (299.0 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 200/601 (33%), Positives = 340/601 (56%)
Query: 641 LAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMA 700
+ +D+++G +E I+ V K ++ + I LW+ F +P + RAA+ +L M
Sbjct: 715 IMVDASLGTIQCLEEIISEFVQKDEIKPAVIQLLWERFTEKTQ-CSPLERRAAVMLLGMM 773
Query: 701 AKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDK----KKLL---LSY 753
A+ ++GS+L ++ +G + LA C AI +L+ K K + L
Sbjct: 774 ARGKPEIIGSNLDVLVTVGLADRVYEDYRLAEEVCNAISKLASNSKPAEGKNSVPFRLPQ 833
Query: 754 GSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVK----KSLSAV 808
+F L ++ GF P + W + A++ IY + PE + +++ K+L +
Sbjct: 834 EQALFVCLSDAVSNGFAQPSSHWIPFMEAAVTLIYQLAEGPEKICAHILQVCSQKALENL 893
Query: 809 FDYVGGEEPHNGIDCVGTSM-PTSVQVSKLGRYLFILSHIAMNQLVYIESCV-CEIRKQK 866
+ G +E +G S +S+ L + ++ +A+ Q+ ++E V E+R+++
Sbjct: 894 QEADGQKEVESGASPSRVSDGASSLPTFLLLHLVALVGQVALRQVAHLEVSVSAELRRRR 953
Query: 867 IKKEKMIADDQNIHSNNNTNGDLPK----DTSINAELGL--AASEDAKLDTLSEKAEKEI 920
I +E+ S+++T P+ DT++ ELGL A+++D + + + E E+
Sbjct: 954 ILREEEKTKKHKERSDSSTIKKRPRSTGNDTTMEEELGLIGASADDTEAELIRSICETEL 1013
Query: 921 ISGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLL 980
+ +K+L + K C N L + P L+A+A L L + +I +++CD++L+LL
Sbjct: 1014 LD----EKHLFSAFVPLVLKICNNPGLYSD-PALRAAAALTLGKICMISSEFCDSHLRLL 1068
Query: 981 FTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHL 1040
FT++E SP +VRSN IA GDLA+RFPN +EPWT ++YARL+DP +VR+ A +V++HL
Sbjct: 1069 FTMMEKSPLPVVRSNLIIAAGDLAIRFPNQVEPWTTHLYARLRDPCQSVRQTAGVVMTHL 1128
Query: 1041 ILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQN 1100
IL DM+KVKG ++EMA+ + D ++ I +A+ FF+ELS K +N IYNLLPDI+ +L + +
Sbjct: 1129 ILKDMVKVKGQVSEMAVLLIDPEEAIVGVAQNFFNELSNK-DNAIYNLLPDIISRLSDPD 1187
Query: 1101 --LKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEK 1158
+ ESF IM+ L +I KDKQ E+LVEKLC RF + RQ+ +S+CLS L +E+
Sbjct: 1188 CGIDEESFHTIMRHLFPYITKDKQTESLVEKLCQRFRTARNERQYRDLSHCLSLLPISER 1247
Query: 1159 GMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFA-KPEVKVCIEEFEEKLNKYHTEKK 1217
G+ KL ++F + L + +V F+ ++ + ++ A KPE K EE E+KL+ H +
Sbjct: 1248 GLHKLQDNFDCFADKLQDPAVYSCFQAVLVRCRRAASKPETKALAEELEQKLSACHNQGL 1307
Query: 1218 D 1218
D
Sbjct: 1308 D 1308
Score = 424 (154.3 bits), Expect = 9.4e-120, Sum P(2) = 9.4e-120
Identities = 116/457 (25%), Positives = 228/457 (49%)
Query: 23 DGNRLYA-QNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSL 81
D +R Y Q +S+ + P+ +F + +E + FD +YSL+R+F +L
Sbjct: 21 DSSRHYVVQEVLSVRELPPAV-------AAFRAAFRERGALAVLQHFDTIYSLLRHFRAL 73
Query: 82 SPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISI 141
+ K +E + + V+ + + LS + D+ DR +H NA K+ + L +
Sbjct: 74 GTAAKEDALELM---MQVVTRHSNELSTILN--DSGLSHTDR-DAHLNALKMNCYLLSGL 127
Query: 142 VLAQEFNISSNNNPKVTASTRKKQP---VNSWNWDPQRGRILNLIANSLEINLPLLFGSS 198
+ A E + +V + + K+ + ++W+ +R +L L+ L+++L L+
Sbjct: 128 LEAFEMEAFKSGLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQLLQLDLRQLWSGL 187
Query: 199 DPDENYLSFVVRNAFLMFENAT--LLKDADTKDALCRIIGACATKYHYIEQSCASIMHLI 256
+E +S + + + EN+ L + T++A ++ T Y ++ + I ++
Sbjct: 188 VVEEELVSLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDHMFSATLKITQML 247
Query: 257 HKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELA 316
++ V A AV K+Y S+ L+REIG+ P+ +DT G + F+ ELA
Sbjct: 248 QHFEHVAPVFAQAVTLWAKEYGLKSIVGELLREIGQKCPQELARDTSGIKGYAVFITELA 307
Query: 317 DRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQA 376
+++P L+ +NI VL+ H GE+Y +RNA++ + +++ + + G+ ++ R T+
Sbjct: 308 EQIPALVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQV---LNGDQLEEAAR-GTRDN 363
Query: 377 MLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSA 436
L+ L DV+ + RSRVLQ++ + + + + + V +A GRL+DKS +V K+A
Sbjct: 364 FLKTLQAHICDVNGFVRSRVLQLFTRIVQGKVLPLTQFLSVVSLAVGRLKDKSVVVVKNA 423
Query: 437 LNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLE 473
+ LL L +NP+ +L + L + +KL ++
Sbjct: 424 IQLLAAFLSNNPYSCKLSCSDLAEPLKKEVQKLQEMK 460
Score = 208 (78.3 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 63/234 (26%), Positives = 113/234 (48%)
Query: 523 DEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTI 582
+E + ++ L + LV L+ FS ++ + + +LM +S S V+ I
Sbjct: 587 EEAVLEEQPQEQPQMELVKQEMLVQYLQDAYNFSVKITEALSLISKLMYENSVSVVQEAI 646
Query: 583 LLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYVRKS-PVET-----AK 636
+ +F + A + +MLPLV S++ I EAV NA+ +Y+ S E+ A+
Sbjct: 647 EFFVTVSKFGVPQALLGVRRMLPLVWSKEPGIKEAVLNAYRQLYLSPSGDSESFQRARAQ 706
Query: 637 NL---LNLA-IDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRA 692
NL L+L +D+++G +E I+ V K ++ + I LW+ F +P + RA
Sbjct: 707 NLVCSLSLIMVDASLGTIQCLEEIISEFVQKDEIKPAVIQLLWERFTEKTQ-CSPLERRA 765
Query: 693 ALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDK 746
A+ +L M A+ ++GS+L ++ +G + LA C AI +L+ K
Sbjct: 766 AVMLLGMMARGKPEIIGSNLDVLVTVGLADRVYEDYRLAEEVCNAISKLASNSK 819
Score = 42 (19.8 bits), Expect = 1.9e-79, Sum P(2) = 1.9e-79
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 9 QNLQALEEQEDEE 21
Q LQ L+E EDEE
Sbjct: 489 QILQPLQEDEDEE 501
>UNIPROTKB|F1NH88 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 GO:GO:0005634 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 EMBL:AADN02061150 EMBL:AADN02061151
EMBL:AADN02061152 IPI:IPI00581041 Ensembl:ENSGALT00000023319
Uniprot:F1NH88
Length = 1386
Score = 832 (297.9 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 198/601 (32%), Positives = 338/601 (56%)
Query: 641 LAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMA 700
+ +D+++G +E I+ V K ++ + I LW+ F +P + RAA+ +L M
Sbjct: 712 IMVDASLGTIQCLEEIISEFVQKDEIKPAVIQLLWERFTEKTQ-CSPLERRAAVMLLGMM 770
Query: 701 AKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDK----KKLL---LSY 753
A+ ++GS+L ++ +G + LA C AI +L+ K K + L
Sbjct: 771 ARGKPEIIGSNLDVLVTVGLADRVYEDYRLAEEVCNAISKLASNSKPAEGKNSVPFRLPQ 830
Query: 754 GSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVK----KSLSAV 808
+F L ++ GF P + W + A++ IY + PE + +++ K+L +
Sbjct: 831 EQALFVCLSDAVSNGFAQPSSHWIPFMEAAVTLIYQLAEGPEKICAHILQVCSQKALENL 890
Query: 809 FDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCV-CEIRKQKI 867
+ G +E + +S+ L + ++ +A+ Q+ ++E V E+R+++I
Sbjct: 891 QEADGQKEESGASPSRVSDGASSLPTFLLLHLVALVGQVALRQVAHLEVSVSAELRRRRI 950
Query: 868 KKEKMIADDQNIHSNNNTNGDLPK----DTSINAELGL--AASEDAKLDTLSEKAEKEII 921
+E+ S+++T P+ DT++ ELGL A+++D + + + E E++
Sbjct: 951 LREEEKTKKHKERSDSSTIKKRPRSTGNDTTMEEELGLIGASADDTEAELIRSICETELL 1010
Query: 922 SGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLF 981
+K+L + K C N L + P L+A+A L L + +I +++CD++L+LLF
Sbjct: 1011 D----EKHLFSAFVPLVLKICNNPGLYSD-PALRAAAALTLGKICMISSEFCDSHLRLLF 1065
Query: 982 TVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLI 1041
T++E SP +VRSN IA GDLA+RFPN +EPWT ++YARL+DP +VR+ A +V++HLI
Sbjct: 1066 TMMEKSPLPVVRSNLIIAAGDLAIRFPNQVEPWTTHLYARLRDPCQSVRQTAGVVMTHLI 1125
Query: 1042 LNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKG-NNPIYNLLPDILGKLCNQN 1100
L DM+KVKG ++EMA+ + D ++ I +A+ FF+ELS K +N IYNLLPDI+ +L + +
Sbjct: 1126 LKDMVKVKGQVSEMAVLLIDPEEAIVGVAQNFFNELSNKATDNAIYNLLPDIISRLSDPD 1185
Query: 1101 --LKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEK 1158
+ ESF IM+ L +I KDKQ E+LVEKLC RF + RQ+ +S+CLS L +E+
Sbjct: 1186 CGIDEESFHTIMRHLFPYITKDKQTESLVEKLCQRFRTARNERQYRDLSHCLSLLPISER 1245
Query: 1159 GMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFA-KPEVKVCIEEFEEKLNKYHTEKK 1217
G+ KL ++F + L + +V F+ ++ + ++ A KPE K EE E+KL+ H +
Sbjct: 1246 GLHKLQDNFDCFADKLQDPAVYSCFQAVLVRCRRAASKPETKALAEELEQKLSACHNQGL 1305
Query: 1218 D 1218
D
Sbjct: 1306 D 1306
Score = 424 (154.3 bits), Expect = 2.0e-119, Sum P(2) = 2.0e-119
Identities = 116/457 (25%), Positives = 228/457 (49%)
Query: 23 DGNRLYA-QNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSL 81
D +R Y Q +S+ + P+ +F + +E + FD +YSL+R+F +L
Sbjct: 21 DSSRHYVVQEVLSVRELPPAV-------AAFRAAFRERGALAVLQHFDTIYSLLRHFRAL 73
Query: 82 SPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISI 141
+ K +E + + V+ + + LS + D+ DR +H NA K+ + L +
Sbjct: 74 GTAAKEDALELM---MQVVTRHSNELSTILN--DSGLSHTDR-DAHLNALKMNCYLLSGL 127
Query: 142 VLAQEFNISSNNNPKVTASTRKKQP---VNSWNWDPQRGRILNLIANSLEINLPLLFGSS 198
+ A E + +V + + K+ + ++W+ +R +L L+ L+++L L+
Sbjct: 128 LEAFEMEAFKSGLVEVDPAGKNKKSRTKASGFSWEDEREPLLRLLTQLLQLDLRQLWSGL 187
Query: 199 DPDENYLSFVVRNAFLMFENAT--LLKDADTKDALCRIIGACATKYHYIEQSCASIMHLI 256
+E +S + + + EN+ L + T++A ++ T Y ++ + I ++
Sbjct: 188 VVEEELVSLLTGCCYRILENSNIGLQRYRATREAATHLLATALTHYDHMFSATLKITQML 247
Query: 257 HKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELA 316
++ V A AV K+Y S+ L+REIG+ P+ +DT G + F+ ELA
Sbjct: 248 QHFEHVAPVFAQAVTLWAKEYGLKSIVGELLREIGQKCPQELARDTSGIKGYAVFITELA 307
Query: 317 DRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQA 376
+++P L+ +NI VL+ H GE+Y +RNA++ + +++ + + G+ ++ R T+
Sbjct: 308 EQIPALVLSNISVLLRHLDGENYMMRNAILSAMAEVLLQV---LNGDQLEEAAR-GTRDN 363
Query: 377 MLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSA 436
L+ L DV+ + RSRVLQ++ + + + + + V +A GRL+DKS +V K+A
Sbjct: 364 FLKTLQAHICDVNGFVRSRVLQLFTRIVQGKVLPLTQFLSVVSLAVGRLKDKSVVVVKNA 423
Query: 437 LNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLE 473
+ LL L +NP+ +L + L + +KL ++
Sbjct: 424 IQLLAAFLSNNPYSCKLSCSDLAEPLKKEVQKLQEMK 460
Score = 245 (91.3 bits), Expect = 2.3e-55, Sum P(2) = 2.3e-55
Identities = 88/389 (22%), Positives = 174/389 (44%)
Query: 523 DEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTI 582
+E + ++ L + LV L+ FS ++ + + +LM +S S V+ I
Sbjct: 587 EEAVLEEQPQEQPQMELVKQEMLVQYLQDAYNFSVKITEALSLISKLMYENSVSVVQEAI 646
Query: 583 LLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYVRKS-PVETAK--NL- 638
+ +F + A + +MLPLV S++ I EAV NA+ +Y+ S E A+ NL
Sbjct: 647 EFFVTVSKFGVPQALLGVRRMLPLVWSKEPGIKEAVLNAYRQLYLSPSGDSERARAQNLV 706
Query: 639 --LNLA-IDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALS 695
L+L +D+++G +E I+ V K ++ + I LW+ F +P + RAA+
Sbjct: 707 CSLSLIMVDASLGTIQCLEEIISEFVQKDEIKPAVIQLLWERFTEKTQ-CSPLERRAAVM 765
Query: 696 VLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDK----KKLL- 750
+L M A+ ++GS+L ++ +G + LA C AI +L+ K K +
Sbjct: 766 LLGMMARGKPEIIGSNLDVLVTVGLADRVYEDYRLAEEVCNAISKLASNSKPAEGKNSVP 825
Query: 751 --LSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSA 807
L +F L ++ GF P + W + A++ IY + PE + +++
Sbjct: 826 FRLPQEQALFVCLSDAVSNGFAQPSSHWIPFMEAAVTLIYQLAEGPEKICAHILQVCSQK 885
Query: 808 VFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIA--MNQLVYIESCVCEIR-K 864
+ + +E + G S P+ V F+L H+ + Q+ + E+
Sbjct: 886 ALENL--QEADGQKEESGAS-PSRVSDGASSLPTFLLLHLVALVGQVALRQVAHLEVSVS 942
Query: 865 QKIKKEKMIADDQNI--HSNNNTNGDLPK 891
++++ +++ +++ H + + + K
Sbjct: 943 AELRRRRILREEEKTKKHKERSDSSTIKK 971
Score = 42 (19.8 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 9/13 (69%), Positives = 10/13 (76%)
Query: 9 QNLQALEEQEDEE 21
Q LQ L+E EDEE
Sbjct: 489 QILQPLQEDEDEE 501
Score = 41 (19.5 bits), Expect = 6.1e-34, Sum P(2) = 6.1e-34
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 1279 QSDGSEEHSGAS-SEVTE 1295
++DG +E SGAS S V++
Sbjct: 892 EADGQKEESGASPSRVSD 909
>UNIPROTKB|F1SLS9 [details] [associations]
symbol:NCAPD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045120 "pronucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0007076 GO:GO:0000228 GO:GO:0045120
PANTHER:PTHR14222 GeneTree:ENSGT00390000017108 GO:GO:0000796
EMBL:CU914489 Ensembl:ENSSSCT00000000755 OMA:MMEDETP Uniprot:F1SLS9
Length = 846
Score = 945 (337.7 bits), Expect = 6.9e-95, P = 6.9e-95
Identities = 233/713 (32%), Positives = 386/713 (54%)
Query: 529 KDSSVPDV----GNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILL 584
+D S P+ L + LV L+ FS+ ++ + + ++M + + V+ I
Sbjct: 46 EDQSAPEKHREDDELVKQEMLVQYLQDAYSFSQKITEAIGIISKMMYEHTTTVVQEVIEF 105
Query: 585 LMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYVR-KSPVETAK------N 637
+ QF + A + +MLPL+ S++ + EAV NA+ +Y++ K AK N
Sbjct: 106 FVMVFQFGVPQALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLKPKGDSARAKAQTLIHN 165
Query: 638 LLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVL 697
L L +D+++G +E I+ V K ++ + LW+ V +P + +++ +L
Sbjct: 166 LSLLLVDASVGTIQCLEEILCEFVQKDELKPAVTQVLWERATEKVP-CSPLERCSSVMLL 224
Query: 698 CMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------L 750
M A+ ++GS+L ++ IG + LA+ C AI +S K L
Sbjct: 225 GMMARGKPEIVGSNLDTLVSIGLDEKFPPDYRLAQQVCHAITNISDRRKPSLGKRHPPFR 284
Query: 751 LSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVF 809
L +F L ++T G PD +W + A++ IY + PE + +++
Sbjct: 285 LPQEHCLFERLREMVTKGIVHPDPLWIPFKEAAVTLIYQLAEGPEAICAQMLQGCAKQAL 344
Query: 810 DYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVCEIRKQKIKK 869
+ + + P +PT + ++ L + +A+ QLV++E V ++ +
Sbjct: 345 EKLEEKSPPQEAPKDTPMLPTFLLMNLLS----LAGDVALQQLVHLEQAV----SGELCR 396
Query: 870 EKMIADDQNIHSNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQ 927
+++ ++Q + + D + ++ E+GL A ++D + + + E E++ G
Sbjct: 397 RRVLQEEQEHKAKDPKEKDASSEATMEEEMGLVGATADDTEAELIRGICELELLDG---- 452
Query: 928 KNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESS 987
K + L K C N L + PEL A+A LAL +F +I A +CD+ L+LLFT++E S
Sbjct: 453 KQTLAAFVPLLLKVCNNPGLYSN-PELCAAASLALGKFCMISATFCDSQLRLLFTMLEKS 511
Query: 988 PSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMK 1047
IVRSN IA GDLA+RFPNL++PWT ++YARL+DP+ VRK A LV++HLIL DM+K
Sbjct: 512 SLPIVRSNLMIATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVK 571
Query: 1048 VKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLC--NQNLKTES 1105
VKG ++EMA+ + D +I+ LAK FF+ELS KGN IYNLLPDI+ +L ++ E
Sbjct: 572 VKGQVSEMAVLLIDPAPQIAALAKNFFNELSHKGN-AIYNLLPDIISRLSAPEGGVEEEP 630
Query: 1106 FCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIE 1165
F IM+ L+ +I KDKQ E+LVEKLC RF RQ+ ++YC+SQL TE+G++K+++
Sbjct: 631 FHTIMKQLLSYITKDKQTESLVEKLCQRFRTARTERQYRDLAYCVSQLPLTERGLRKMLD 690
Query: 1166 SFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKD 1218
+F + LS++S+ F +++ K ++ AKPE K I+EFE+KL HT D
Sbjct: 691 NFDCFGDKLSDESIFSAFLSVVGKLRRGAKPEGKAVIDEFEQKLRACHTRGLD 743
>FB|FBgn0039680 [details] [associations]
symbol:CAP-D2 "CAP-D2 condensin subunit" species:7227
"Drosophila melanogaster" [GO:0007067 "mitosis" evidence=ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0007076 "mitotic chromosome condensation"
evidence=IMP] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 EMBL:AE014297 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007052 GO:GO:0007076 eggNOG:COG5098 KO:K06677 OMA:TERQHRD
ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 GO:GO:0000796 EMBL:AY122183
RefSeq:NP_651709.1 UniGene:Dm.28357 IntAct:Q9VAJ1 MINT:MINT-991637
STRING:Q9VAJ1 EnsemblMetazoa:FBtr0085452 GeneID:43491
KEGG:dme:Dmel_CG1911 UCSC:CG1911-RA CTD:43491 FlyBase:FBgn0039680
InParanoid:Q9VAJ1 OrthoDB:EOG47D7WZ GenomeRNAi:43491 NextBio:834214
Uniprot:Q9VAJ1
Length = 1380
Score = 577 (208.2 bits), Expect = 8.5e-93, Sum P(3) = 8.5e-93
Identities = 135/402 (33%), Positives = 227/402 (56%)
Query: 830 TSVQVSKLGRYLFILSHIAMNQLVYIESCVCEIRKQKIK----KEKMIADDQNIHSNNNT 885
T + V + R +F + ++ + ++++++ + K + + +E+ + Q S+N
Sbjct: 913 TLIPVYLVSRLIFCIGYMTIKEMIFLDMDIYNNMKYRDELTALEERKNRNQQAGSSHNAA 972
Query: 886 NGDLPKDT-SINAEL-GLAAS--EDAKLDTLSEKAEKEI---ISGGSSQK---N---LIG 932
L + L G+AA ++ D + AE I I G N L+
Sbjct: 973 RLTLNMSAMEVRKRLSGVAAEPQQEPDDDLVGATAEDNIAEEIHGICEDMLLYNPDALLS 1032
Query: 933 HCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIV 992
A F+ + C+ P LQ +A LAL R M + + +C++N+ L ++ + + +
Sbjct: 1033 KLAPFIIEICKRPGEFGD-PTLQQAATLALARLMTVSSRFCESNMSFLMNILNLTKNIRI 1091
Query: 993 RSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYI 1052
+ N + L DL RFPN++EPWT + YA+L + + +R AV +LSHLILN+M++VKG I
Sbjct: 1092 KCNTVVGLSDLTFRFPNIIEPWTGHFYAQLHESNTELRLTAVKMLSHLILNEMIRVKGQI 1151
Query: 1053 NEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKL--CNQNLKTESFCNIM 1110
+MA+ + D ++ I N+ K FF E++ K +N +YN+LPDI+ +L N NL + + IM
Sbjct: 1152 ADMALCIVDGNEEIRNITKQFFKEIANK-SNILYNVLPDIISRLGDINLNLDEDKYRIIM 1210
Query: 1111 QLLIGFIKKDKQMEALVEKLCNRFSGVTDI-RQWEYISYCLSQLAFTEKGMKKLIESFKT 1169
++G I+KD+Q+E LVEKLC RF VT + RQW I+YCL L + E+ +KKL+++ +
Sbjct: 1211 SYILGLIQKDRQIETLVEKLCLRFP-VTRVERQWRDIAYCLGLLTYNERAVKKLMDNMQH 1269
Query: 1170 YEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNK 1211
Y + D V +F+ II+ + K AKPE+K + EFE +LN+
Sbjct: 1270 YRDKVQVDEVYQSFKLIISNTNKLAKPELKAVVTEFENRLNE 1311
Score = 287 (106.1 bits), Expect = 8.5e-93, Sum P(3) = 8.5e-93
Identities = 114/498 (22%), Positives = 221/498 (44%)
Query: 5 FVFPQNLQALEEQEDEEHDGNRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEE 64
FV P N L +++ ++ I P++L E + V L D F I E
Sbjct: 9 FVLPLNASDLINSSGDQYYVKEIFGAQEI------PAKLQECKRKVH--LGDP--FYIFE 58
Query: 65 QDLFDRVYSLIRNFSSLSPSCKLSLVES---LRSNLSVLLPNVDSLSRVSQSQDNETPVL 121
FD YS+I S S + +L+ S L + L ++ L S+ N+
Sbjct: 59 H--FDLYYSIIEARGSDGASAQ-NLMRSFDLLYLTVEKLFQDLQPLLTASEPMSNQ---- 111
Query: 122 DRLSSHRNAFKIYTFFLISIVLAQEFNIS-SNNNPKVTASTRKKQPVNSW----NWDPQR 176
+ +S+ N K+ F +S V ++ + + ++ ++ +P NW+ +R
Sbjct: 112 -QRNSYLNLTKMTLFLQVSTVKKINNSVQQAMRDQQLNVQKKRAKPSEGLEQFPNWEVKR 170
Query: 177 GRILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKD-ADTKDALCRII 235
G+ L + N L+ L L+ +E++++ + + E L D D + +I+
Sbjct: 171 GKFLVQLFNVLQCPLEKLWSPPVAEEDFINLLCDPCYRTIELLPLRMDNKHVFDTIFQIL 230
Query: 236 GACATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNP 295
G +++ I+ ++ + +A + ++Y S+ + LI+ I
Sbjct: 231 GTSIKRFNQAMTFPVRILQILRGTEHAAHSVAAGILLLHEEYGISSVFSILIKSIVDAL- 289
Query: 296 KAYVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHF-GGESYKIRNALVGVLGKLVA 354
+ D+ +++ FL E ++ P LI ++ L +S+ +RN ++ ++G V
Sbjct: 290 RMDSSDSSVSKHFSNFLAEFSNIAPSLIVPHLEKLAEDLLDCQSHTLRNCVLQIIGDTVV 349
Query: 355 KAFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLW 414
++ E S+ ++ + LE L+ D+SA+ RS+VL +W L +H++ +
Sbjct: 350 S---ELTSEDLSEELK-EVRNEFLEHLMAHILDISAHVRSKVLSIWHHLKTQHAIPLNFL 405
Query: 415 NEVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLD---EYRKKLNG 471
V E A GRLEDKS++VR++A++L+ L+ NP+ +L I A + + +KLN
Sbjct: 406 TRVLEEAIGRLEDKSSLVRRAAMHLIKSALESNPYSSKLSIDELRAKHEHEVQAMEKLNE 465
Query: 472 L--EPDIHSESITDGLPS 487
+ E E + D S
Sbjct: 466 VLEEERKQEEKLNDEFSS 483
Score = 206 (77.6 bits), Expect = 8.5e-93, Sum P(3) = 8.5e-93
Identities = 55/206 (26%), Positives = 104/206 (50%)
Query: 539 LEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEA 598
L+Q + V L+ + F+ ++S P L +++ S + +DV + L F I G E+
Sbjct: 580 LQQIKT-VQFLKDSIDFAVLMTSAFPKLHEMLMSKTNTDVFEAVDLFTTGYMFGIHGTES 638
Query: 599 CLHKMLPLVLSQDKSIYEAVENAFITIYV------RKSPVETAKNLLNLAIDSNIGDQAA 652
+ +ML LV S DK +AV +A+ + R ++ +NL + G A
Sbjct: 639 GMQRMLQLVWSSDKEKRDAVSDAYKRVLFSTDQTGRAHAIKVVQNLSKFLSEIEYGHYTA 698
Query: 653 MEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHL 712
+E ++ V GD+ + I L++ F + GTT +SR +L +L MA++S ++++ ++
Sbjct: 699 LESLMTEWVLGGDIDAAVIQVLFERFTLKLEGTTSNESRLSLQLLIMASQSKSSIVSANT 758
Query: 713 QDIIDIGFGRWAKVEPLLARTACIAI 738
I DI G + +P + T+C+ +
Sbjct: 759 AIIEDIAVGERVRRDPRIF-TSCLQL 783
Score = 39 (18.8 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 504 EVVVQEQQESLTDSCLPLADEGIADKDS-SVPDVGNLEQTRALVASLEAG 552
+ VV E + L + CL + + A D S P+ G +TRA + + G
Sbjct: 1299 KAVVTEFENRLNE-CLQVNPDTAAQGDQESTPE-GQGNRTRAAPRTKKGG 1346
>POMBASE|SPBC776.13 [details] [associations]
symbol:cnd1 "condensin complex non-SMC subunit Cnd1"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 PomBase:SPBC776.13 GO:GO:0005737 SUPFAM:SSF48371
GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0007076 GO:GO:0000939
eggNOG:COG5098 KO:K06677 OMA:TERQHRD InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 GO:GO:0000796 EMBL:AB030212
PIR:T43519 RefSeq:NP_596329.1 ProteinModelPortal:O94679
DIP:DIP-59184N STRING:O94679 EnsemblFungi:SPBC776.13.1
GeneID:2541201 KEGG:spo:SPBC776.13 HOGENOM:HOG000193429
OrthoDB:EOG4BK8BZ NextBio:20802313 Uniprot:O94679
Length = 1158
Score = 878 (314.1 bits), Expect = 2.7e-87, P = 2.7e-87
Identities = 294/1145 (25%), Positives = 543/1145 (47%)
Query: 61 CIEEQDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPV 120
C +E D ++++++ +F+ LS S + + + L SN+S ++ + +S + + T
Sbjct: 51 CFDE-DCLEKLFAICSHFADLSSSVRNKVYDLLTSNISSESAILEDM--ISANATDFTVP 107
Query: 121 LDRLSSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQPVNSWNWD--PQRGR 178
L + AF++ L S Q I S+ N T RKK P + NW+
Sbjct: 108 QTNLETTGIAFQLTVNSLSSS--NQLSVIRSSTN---TVKGRKKNPTTNSNWNGISHVNA 162
Query: 179 ILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGAC 238
+L+ I + L ++ +S + +LS ++ + + E+ +K+A + L IIG
Sbjct: 163 LLDAIITLFQKKLSRVWTTSSERDMFLSLFLKPIYTLMESEINIKNASFRSRLFNIIGLA 222
Query: 239 ATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAY 298
+++ + +I+ + ++ + + AD V ++ +LA +IR + + +
Sbjct: 223 VQFHNHTTAAETNIIQNLQYFEHLSEYAADLVHIVTVQFNSVTLAEGIIRTL--CSLEFN 280
Query: 299 VKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFK 358
D G + + FLV L+ +P L + L+ ESY +R A++ VL +V
Sbjct: 281 DNDVKGPKQVALFLVRLSSLIPNLCLKQLTQLVKLLDSESYTLRCAIIEVLANVVIDQIH 340
Query: 359 DIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVA 418
D S+SV T Q+++++L ER D+S Y R++VL V+ ++ + E+A
Sbjct: 341 DEAQNEMSESVPA-TVQSLMDLLSERLLDISPYCRTKVLHVFIKIFDLPIKYPRKRQEIA 399
Query: 419 EVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQ----LRIASFEATLDEYRKKLNGLEP 474
E+ L+D+S+ VR++A+ L +L +PF L +E L ++LN L+P
Sbjct: 400 ELVIRCLQDRSSHVRRNAIKLFSKLLTTHPFSVMHNGLLTRNIWEKGLSIIEEQLNSLQP 459
Query: 475 DIHSESITDGLPSDRGTCNGDGEVDD--LNAEVVVQEQQESLTDSCLPLADEGIADKDSS 532
E + D + EVD+ L ++Q+ + +S L + +++ S
Sbjct: 460 K-QQEKVVDS----------ELEVDENLLEDATMIQDDESHEGESHL---ENSLSEYVDS 505
Query: 533 VP--DVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQ 590
VP ++ + T+ LEA L++ V + + QL+ + + S+V ++ + C
Sbjct: 506 VPAEEIVKVNLTKRFY--LEA-LQYIDIVEAGAKIISQLLFAKNKSEVIESMDFFVFCNS 562
Query: 591 FQIDGAEACLHKMLPLVL---SQDK--SIYEAVENAFITIYVRKSPVE--------TAKN 637
F I ++ + KM+ L+ + D+ +I V + + T++ P A+N
Sbjct: 563 FGISSSKLYIKKMIHLIWVKGTSDEGNNIQNHVLSCYKTLFFEPPPNSGTNEAANYIARN 622
Query: 638 LLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVL 697
L++L D+++ + ++E ++ L+ G S I+ LW + + + + R ++ V+
Sbjct: 623 LISLTYDASLAELTSLEQMLCILMKDGYFSHLVITKLWQVYSYQKKDISRTQRRGSIIVI 682
Query: 698 CMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRV 757
M A + V+ L +I IG G + +LAR CIAI+R+ ++ +++ +
Sbjct: 683 GMLALGNTDVVMQGLDHLIQIGLGPPGLEDLVLARYTCIAIKRIGKDASGSSNINFPNS- 741
Query: 758 FATLESLITGFWLPD--NIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGE 815
+ L P W+ ++AI AIY + P+ L +++ +F E
Sbjct: 742 HTLCQKLCMLLLRPSFSEEWFGLEEQAIEAIYAVAKHPDELCTNIILLLTKQLFKPSNHE 801
Query: 816 EPHNGID-CVGTSMPTSVQVS----------KLGRYLFILSHIAMNQLVYIESCVCEIRK 864
+ D + + S + +L +F++ H+A+ QLVYIE C E ++
Sbjct: 802 NTTSNDDHAMDEDLDDSPEEETLKDEEEIGIRLAHLIFLVGHVAIKQLVYIEYCEAEFKR 861
Query: 865 QKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGLAASEDAKLDTLSEKAEKEIISGG 924
+K E++ QN SNN NG ++TS +L SED + ++ E+E++ G
Sbjct: 862 RKADAERLAV--QN--SNNPING---QETS-EYDLITGTSEDDFSEAMTFIRERELLYGE 913
Query: 925 SSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVV 984
+S L+ A + + C N N L A A L L +FM + ++C +L LL T++
Sbjct: 914 NS---LLSRFAPLVVELCSNHKSHNNQSLLLA-ASLTLSKFMCLSNNFCMEHLPLLITIL 969
Query: 985 ESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILND 1044
E + I+R+N I L DL V F + ++ +E +Y RL D +V+K + L+ LIL
Sbjct: 970 EKCDNPIIRNNLVIGLADLTVCFNHFIDEISEYLYRRLMDEESSVKKTCFMTLAFLILAG 1029
Query: 1045 MMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCN----QN 1100
+KVKG + MA +EDED RIS+LA++FF + + K N+ +YN DI L Q+
Sbjct: 1030 QIKVKGQLGIMARSLEDEDARISDLARMFFTDFAAKDNS-VYNNFIDIFSVLSRSAEEQD 1088
Query: 1101 LKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGM 1160
F I++ L FI+K++ + L E+L R RQW+++ Y LS L +
Sbjct: 1089 EDDAKFKRIIRFLTSFIEKERHTKQLAERLAARLDRCKTQRQWDHVVYALSLLPHKADNI 1148
Query: 1161 KKLIE 1165
+KLI+
Sbjct: 1149 QKLID 1153
>ASPGD|ASPL0000038678 [details] [associations]
symbol:AN3451 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0051301 EMBL:BN001306 GO:GO:0030466 GO:GO:0007076 OMA:TERQHRD
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922 GO:GO:0043007
GO:GO:0010032 GO:GO:0070058 EnsemblFungi:CADANIAT00009583
Uniprot:C8VHB5
Length = 1189
Score = 861 (308.1 bits), Expect = 4.2e-84, P = 4.2e-84
Identities = 299/1168 (25%), Positives = 551/1168 (47%)
Query: 40 PSELVEFVKGVSFDLSDKELFCIEEQDLFDRVYSLIRNFSSLSPSCKLS-LVESLRSNLS 98
PS +++ V D + + FD + L++ +S+ P+ LS L++ + S LS
Sbjct: 43 PSTVIDNVLNSIVDAVAENPEALARASSFDSLQFLLK-YSNFLPTKSLSKLLDLIVSGLS 101
Query: 99 VLLPNVDSLSRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVT 158
V D + D E+ D + H+ ++Y F L + A E + +
Sbjct: 102 V---EADIIHG-----DLESDEQDSIQPHKELLEMYGFILQWALSAVELKAAEKPAEALP 153
Query: 159 A--STRKK-QP--VNSWNWD--PQRGRILNLIANSLEINLPLLFGSSDPDENYLSFVVRN 211
A T K +P NWD Q + + +++ L +F ++ + +++ R+
Sbjct: 154 ARRGTGKSGRPRTTKDSNWDGTAQIQVAMETMCKVMKLKLSKIFLTTSDRDTFINLFTRS 213
Query: 212 AFLMFENATLLKDADTKDALCRIIGACATKYH-YIEQSCASIMHLIHKYDFVVVHMADAV 270
++L+ E+ +K + +++ A K+H + + SI+ + ++ + MA+ +
Sbjct: 214 SYLILESEQRVKSMAIRMHAFKVL-CIAVKHHGHGFGAQTSIVQSLTYFEHLSEPMAEFL 272
Query: 271 AGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADRLPKLISTNIGVL 330
++Y L+ +++E+G N + DT G +++ F+++L++ P+LI + +L
Sbjct: 273 HILAEQYDYPQLSDEILKELG--NKEFNSNDTRGPKSVSAFIIKLSELAPRLIIKQMTLL 330
Query: 331 ILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSA 390
ESY +R A++ V G L+A K E + KS A ++L ER D++
Sbjct: 331 AKQLDSESYTLRCAVIEVCGNLIADLSKQEERTDNYKS----QINAFFDVLEERFLDINP 386
Query: 391 YTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNPF- 449
Y R R +QV+ +C+ AE+AA LEDKS+ VR++A+ L+ ++ +PF
Sbjct: 387 YCRCRAIQVYMRICDLEQKFPKRRQAAAELAARSLEDKSSNVRRNAIKLIAKLVSTHPFS 446
Query: 450 ---GPQLRIASFEATLDEYRKKLNGLEPDIHSESITDGLPSDRGTCNGDGEVDDLNAEVV 506
G QL + + LD +LN L P E T G S + + D E+ D ++
Sbjct: 447 VMHGGQLSLKEWTERLDAVDAELNALRPP---E--TPGFDSGDAS-HIDSELLDDATQLP 500
Query: 507 VQEQQES--LTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMP 564
++ +++ +A + A++ ++ + L+ TR EA +RF + + +
Sbjct: 501 DDSPSKAPRMSEEEKTIAMKKAAEQAATSELLTRLQLTRKYYN--EA-IRFIEVLHAASN 557
Query: 565 TLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIY-EAVENAFI 623
+ QL++S + S+ + + ++++ A + +ML L+ ++ S + V+ I
Sbjct: 558 IVTQLLSSKNKSEAIEAMDFFVMLDAYKVETARTGIRRMLRLIWTKGNSDEGKGVQTHLI 617
Query: 624 TIYVRK--------SPVETA----KNLLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTI 671
Y SP + A +N+L+L + + +E ++ T++ G +S + I
Sbjct: 618 DCYKGLFFEAPDTFSPNDAANYIARNMLSLTFGATPAELTCLEQLLSTMMRAGHISDAVI 677
Query: 672 SALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLA 731
+ LW + + + R A+ VL M A + ++ ++ ++ IG G + + +LA
Sbjct: 678 AKLWQVYGVQKKEISRTQRRGAIIVLGMIALADPEIVIKEIEIMLRIGLGSLGRSDLILA 737
Query: 732 RTACIAIQRL--SQEDKKK----LLLSYGSRVFATLESLITGFWLPDNIWYTAADKAISA 785
+ CIA++R+ ++ K K L+ V L +++ WY A++AISA
Sbjct: 738 KYTCIALRRMVPGRQAKSKESGISKLTNDHPVLTKLAAMVETV-SDSKEWYGVAEQAISA 796
Query: 786 IYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILS 845
IY + P+ L D+VK+ +VF D P + K S
Sbjct: 797 IYALSKHPDVLCSDIVKRKTRSVFQPQTRPPSSRSPDNEDGQRPGTASTEKSVSGQKT-S 855
Query: 846 HIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGLAASE 905
A++QL++I + KQ + E D + + N L N E G E
Sbjct: 856 SAALSQLLFIVGHIAI--KQIVHLELCELDFKRRKAEQEKNKPLNMAVQKNDEPG----E 909
Query: 906 DAKLDTLSEKAEKEIISGGSS--QKNLIGHCASFLSKF----CRNFSLMNKYPE--LQAS 957
+ +LD + E + + ++ L+ S LS F + N Y + LQA+
Sbjct: 910 NDELDLIGGTTEDDFTEAIAHIRERELLYGANSLLSNFGPLVAEICANNNTYSDRNLQAA 969
Query: 958 AMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTEN 1017
A + + + M + A+YC+ NL LL T++E S IVRSN IALGD+AV F +L++ T+
Sbjct: 970 ATICMAKLMCVSAEYCEKNLPLLITIMERSEDPIVRSNAVIALGDMAVCFNHLIDENTDF 1029
Query: 1018 MYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHEL 1077
+Y RL D +V++ ++ L+ LIL +KVKG + EMA +ED+D+RI++L+++FF EL
Sbjct: 1030 LYRRLNDDDASVKRTCLMTLTFLILAGQVKVKGQLGEMAKCLEDDDKRIADLSRMFFTEL 1089
Query: 1078 SKKGNNPIYNLLPDILGKL-CNQNLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSG 1136
+ K +N +YN D+ L +NL+ + I++ LIGFI+K+K L EKL R
Sbjct: 1090 AGK-DNAVYNHFVDMFSLLSAERNLEEGALRRIVKFLIGFIEKEKHARQLAEKLAARLPR 1148
Query: 1137 VTDIRQWEYISYCLSQLAFTEKGMKKLI 1164
RQW ++Y LS L + + K++
Sbjct: 1149 CETERQWNDVAYTLSLLPHKNEEIAKIV 1176
>SGD|S000004262 [details] [associations]
symbol:YCS4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;IMP;TAS;IPI] [GO:0005694 "chromosome"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0070058 "tRNA gene clustering"
evidence=IMP] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0043007 "maintenance of rDNA" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
SGD:S000004262 SUPFAM:SSF48371 GO:GO:0005730 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 EMBL:BK006945 GO:GO:0030466
GO:GO:0007076 EMBL:U17244 eggNOG:COG5098 KO:K06677 OMA:TERQHRD
InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
GeneTree:ENSGT00390000017108 HOGENOM:HOG000193429 OrthoDB:EOG4BK8BZ
EMBL:U17245 PIR:S51408 RefSeq:NP_013374.1 ProteinModelPortal:Q06156
IntAct:Q06156 MINT:MINT-2492197 STRING:Q06156 PaxDb:Q06156
PeptideAtlas:Q06156 EnsemblFungi:YLR272C GeneID:850977
KEGG:sce:YLR272C CYGD:YLR272c NextBio:967484 Genevestigator:Q06156
GermOnline:YLR272C GO:GO:0000799 GO:GO:0043007 GO:GO:0010032
GO:GO:0070058 Uniprot:Q06156
Length = 1176
Score = 717 (257.5 bits), Expect = 1.7e-67, P = 1.7e-67
Identities = 261/1068 (24%), Positives = 494/1068 (46%)
Query: 150 SSNNNPKVTASTRKKQPVNSWNWD-PQRGRILNLIANSLEINLPLLFGSSDPDENYLSFV 208
S+N N S V + D Q +L I LEINL +F ++ + ++
Sbjct: 137 STNLNRSAKNSKNDSANVELFKRDCNQMENLLESITKLLEINLSKIFQTTPEKDLFIGLF 196
Query: 209 VRNAFLMFENATLLKDADTKDALCRIIGACATKYHYIEQSCASIMHLIHKYDFVVVHMAD 268
R F++ E + K + K + RI+ C + +S+M + + + V A+
Sbjct: 197 TRPLFVLLEIEPVTKVSSLKMFIQRILAMCVKNHGQSSSIQSSLMTNLTYFLHLSVFNAE 256
Query: 269 AVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADRLPKLISTNIG 328
+ +Y L +++EI A KDT G + I FL++L++ P ++ +
Sbjct: 257 LLKLLNDEYNYPQLTEDILKEISTRVFNA--KDTTGPKAISNFLIKLSELSPGIMLRQMN 314
Query: 329 VLILHFGGESYKIRNALVGVLGKLVAKAFKD---IEGEASSKSVRLRTKQAMLEILLERC 385
++I S +R ++V G +VA+ +D +E +V + + +
Sbjct: 315 LVITLLNNSSITLRCSVVEACGNIVAELAQDPQTMEHYKQQIAVLIELLEERFQDSNPYV 374
Query: 386 RDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLVMMLQ 445
R + S++ + ++ + + L + + + S K LL+
Sbjct: 375 RTKAIQGCSKICDLSSKFNKSKAKFTSLAVRSLQDRSSLVRRNSV---KLLSKLLLKHPF 431
Query: 446 HNPFGPQLRIASFEATLDEYRKKLNGLEPDIHS-ESITDGLP---------SDRGTCNGD 495
G QLR++ +E L +LN + S E++ D + D G C +
Sbjct: 432 KAIHGSQLRLSEWEEYLKGSESQLNSTLKKVESQETLNDTIERSLIEEEVEQDEGQCRTE 491
Query: 496 GEVD-DLNAEVV-VQEQQESL----TDSCLPLADEGIADKDSSVPDVGNLEQTRALVASL 549
E + +AE+ ++ + E++ T + L + KD+ + + + ++ L+++L
Sbjct: 492 LEGSFNKSAELSRIENEVENINATNTSVLMKLKLMIVYYKDA-ISFIKEIHKSIELISNL 550
Query: 550 EAGLRFSKCVSSTMPTLVQLMASSSASDVE------NTILLLMRCKQFQIDGAEACLHKM 603
FSK + + ++ + + A D+E +L L+ K +G +H
Sbjct: 551 ----LFSKNRNEVLESM-DFLVLADAFDIELSEFGIKKMLHLVWMKGTNDEGTSISVH-- 603
Query: 604 LPLVLSQDKSIYEAVENAFITIYVRKSPVETAKNLLNLAIDSNIGDQAAMEFIVGTLVSK 663
++ K ++ ++ +++ AKNL+NL+I ++I D A++E ++G + +
Sbjct: 604 ---LIECYKQLFLTAPDS---CNMQEKAAHIAKNLINLSIGASIADLASLEQLLGMMYEQ 657
Query: 664 GDVSMSTISALWDFFCF----------NVS------GTTPEKSRAALSVLCMAAKSSAAV 707
+ I+ LW + NV+ G + E+ ++ +L M + + +
Sbjct: 658 KLIDQHVINILWAIYNSASKASMQKEQNVNNRDSEKGFSKEQIHGSIIILGMLSLADNEI 717
Query: 708 LGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRV----FATLES 763
L+ +++IG G + L R +C+A++R+ + + + + L +
Sbjct: 718 ALKGLESLLNIGLGAVGLKDLTLCRYSCLALERMVPKRSTIITKAINQELEDVAVKKLYA 777
Query: 764 LITGFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDC 823
+I + DN +Y ++A+SA++TI P+ LA DL+++ F G E + I
Sbjct: 778 IIINY-TKDNEYYPMCEQALSALFTISSKPDILATDLIREKTMMTF---GKPEEEDSI-- 831
Query: 824 VGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSN- 882
S+ S +V L + LFI+ +A+ LVY+E C E +K+KI+ E +N ++
Sbjct: 832 --LSLEQSSRVVSLSQLLFIVGQVAIKTLVYLEKCEAEFKKRKIEAETRNGKVKNQGADV 889
Query: 883 NNTNGDLPKDTSINAELGLAASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFC 942
NT D D + +G +ED D + E E++ G +K+++G + +
Sbjct: 890 TNTTQDNGGDKELEM-IG-GTNEDDFTDAIQFVKENELLFG---EKSILGKFCPIVEEIV 944
Query: 943 RNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGD 1002
N S + P LQ +A L L + M + + YC+ +L LL TV+E SP +RSN + LGD
Sbjct: 945 SNSSRFSD-PMLQRTATLCLEKLMCLSSKYCEKSLPLLITVMEKSPDPTIRSNAVLGLGD 1003
Query: 1003 LAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDE 1062
+AV F NL++ T+ +Y RL D ++ V++ ++ ++ LIL +KVKG + EMA +++
Sbjct: 1004 MAVCFNNLVDENTDYLYRRLHDENLMVQRTCLMTVTFLILAGQVKVKGQLGEMAKCLDNP 1063
Query: 1063 DQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQNLK-TESFCNIMQLLIGFIKKDK 1121
DQ IS++ +LFF EL+ K +N IYN DI L + +L ESF I++ L+ FI K++
Sbjct: 1064 DQGISDMCRLFFTELASK-DNAIYNGFIDIFSNLSSDDLLGKESFKKIIKFLLTFIDKER 1122
Query: 1122 QMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIES-FK 1168
+ L EKL R +QW+ I++ L+ L + + + L+E FK
Sbjct: 1123 HQKQLNEKLVGRLRKCETQKQWDDIAFVLNNLPYKNEDVTALLEQGFK 1170
Score = 351 (128.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 147/640 (22%), Positives = 295/640 (46%)
Query: 66 DLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLS 125
D + + L +F L+P + L + S+LS L + D + +S S N T + +
Sbjct: 50 DSLEALIDLCHDFPHLTPKLQTQLSYLISSSLSNL--SKDIKANLS-SNVNFTEIGGLIP 106
Query: 126 SHRNAFKIYTFFLISIVLA--QE--FNISSNN-NPKVTASTRKKQPVNS--WNWD-PQRG 177
+ + Y + LI ++L Q+ +SS + N +A K N + D Q
Sbjct: 107 QWKRHLEEYGY-LIQVLLTFLQDELHKVSSQSTNLNRSAKNSKNDSANVELFKRDCNQME 165
Query: 178 RILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGA 237
+L I LEINL +F ++ + ++ R F++ E + K + K + RI+
Sbjct: 166 NLLESITKLLEINLSKIFQTTPEKDLFIGLFTRPLFVLLEIEPVTKVSSLKMFIQRILAM 225
Query: 238 CATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKA 297
C + +S+M + + + V A+ + +Y L +++EI A
Sbjct: 226 CVKNHGQSSSIQSSLMTNLTYFLHLSVFNAELLKLLNDEYNYPQLTEDILKEISTRVFNA 285
Query: 298 YVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAF 357
KDT G + I FL++L++ P ++ + ++I S +R ++V G +VA+
Sbjct: 286 --KDTTGPKAISNFLIKLSELSPGIMLRQMNLVITLLNNSSITLRCSVVEACGNIVAELA 343
Query: 358 KDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEV 417
+D + K + ++E+L ER +D + Y R++ +Q +++C+ S +
Sbjct: 344 QDPQTMEHYK----QQIAVLIELLEERFQDSNPYVRTKAIQGCSKICDLSSKFNKSKAKF 399
Query: 418 AEVAAGRLEDKSAIVRKSALNLLVMMLQHNPF----GPQLRIASFEATLDEYRKKLNGLE 473
+A L+D+S++VR++++ LL +L +PF G QLR++ +E L +LN
Sbjct: 400 TSLAVRSLQDRSSLVRRNSVKLLSKLLLKHPFKAIHGSQLRLSEWEEYLKGSESQLNSTL 459
Query: 474 PDIHS-ESITDGLPSDRGTCNGDGEVDDLNAEVVVQEQ-QESLTDSCLPLADEGIADKDS 531
+ S E++ D + +R + E D+ ++ +S S + E I ++
Sbjct: 460 KKVESQETLNDTI--ERSLIEEEVEQDEGQCRTELEGSFNKSAELSRIENEVENINATNT 517
Query: 532 SVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQF 591
SV L + + ++ + + F K + ++ + L+ S + ++V ++ L+ F
Sbjct: 518 SV-----LMKLKLMIVYYKDAISFIKEIHKSIELISNLLFSKNRNEVLESMDFLVLADAF 572
Query: 592 QIDGAEACLHKMLPLVL---SQDK----SIY--EAVENAFITI----YVRKSPVETAKNL 638
I+ +E + KML LV + D+ S++ E + F+T +++ AKNL
Sbjct: 573 DIELSEFGIKKMLHLVWMKGTNDEGTSISVHLIECYKQLFLTAPDSCNMQEKAAHIAKNL 632
Query: 639 LNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFF 678
+NL+I ++I D A++E ++G + + + I+ LW +
Sbjct: 633 INLSIGASIADLASLEQLLGMMYEQKLIDQHVINILWAIY 672
Score = 43 (20.2 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 1165 ESFKTYEHALSEDSVM--DNFRNIINKSKK-FAKPEVKVCIEEFEEKLNKYHTEKKDQEA 1221
++ T+ EDS++ + +++ S+ F +V + + EK +K+ EA
Sbjct: 817 KTMMTFGKPEEEDSILSLEQSSRVVSLSQLLFIVGQVAIKTLVYLEKCEA-EFKKRKIEA 875
Query: 1222 TTRNAQIHQQKVNTMGNSVAD 1242
TRN ++ Q + N+ D
Sbjct: 876 ETRNGKVKNQGADVT-NTTQD 895
>CGD|CAL0001793 [details] [associations]
symbol:YCS4 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000939 "condensed chromosome
inner kinetochore" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0043007
"maintenance of rDNA" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0070058 "tRNA gene clustering"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] InterPro:IPR007673 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF017127 CGD:CAL0001793 GO:GO:0005634
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0007076 eggNOG:COG5098 KO:K06677 InterPro:IPR024324
PANTHER:PTHR14222 Pfam:PF12922 EMBL:AACQ01000133 EMBL:AACQ01000132
RefSeq:XP_713140.1 RefSeq:XP_713186.1 STRING:Q59U69 GeneID:3645154
GeneID:3645196 KEGG:cal:CaO19.1883 KEGG:cal:CaO19.9439
Uniprot:Q59U69
Length = 1172
Score = 552 (199.4 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 191/756 (25%), Positives = 353/756 (46%)
Query: 450 GPQLRIASFEATLDEYRKKLNGLEP-DIHS----ESITDGLPSDRGTCNGDGEVDDLNAE 504
G QL + ++ L + +L P D+ + +S T + D + + ++LN +
Sbjct: 431 GTQLALTFWKQKLKDAEAELMKYIPADVQAGPEQQSDTSDVEDDGDESDKVEQENNLNGQ 490
Query: 505 VVVQEQQESLTD-SCLPLADEG--------IADKDS---SVPDVGNLEQTRALVASLEAG 552
++ E D +++EG +A+ S ++PD L + + +
Sbjct: 491 AEATKKDEPTMDIDKEDVSEEGDREGESDIVANTSSFNDNLPDATVLARVKLTANYYKDA 550
Query: 553 LRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVL---S 609
+ F + V + L+ S + ++ + + L+ + ++ + + KML LV S
Sbjct: 551 VDFVEAVQHGTDVISGLLFSKNRNEAIDAMDFLVLADAYGVENSHVGIRKMLHLVWMKGS 610
Query: 610 QD--KSI----YEAVENAFITIYVRKSPVETA----KNLLNLAIDSNIGDQAAMEFIVGT 659
D KS+ + ++ F+ S +E A KNL+ L + +++ D A++E ++G
Sbjct: 611 SDEGKSVPAHLIDCYKSLFLIAPNSASKIEKATYIAKNLIGLTLKASVADLASLEKLLGL 670
Query: 660 LVSKGDVSMSTISALWDFFCFNVSGTTPE---KSRAALSVLCMAAKSSAAVLGSHLQDII 716
+ + ++ I+ LW + N+S + E + R A+ +L M + + ++
Sbjct: 671 MYAAMMINFEVINVLWQIY--NLSDRSEEVRRQKRGAIIILGMLSLEDNQIAIKGFDSLL 728
Query: 717 DIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRVFATLESLITGFWLPDNIWY 776
+IG G K + +L R CIA+QR+ D KK S ++ E IT F
Sbjct: 729 NIGLGDEGKDDLILGRYTCIALQRVIPADAKKN--STMVKI-PREEEAITKF-------- 777
Query: 777 TAADKAISAIYTIHPTPETLAVDLVKK--SLSAVFDYVGGEEPHNGIDCVGTSMPTSVQV 834
K I Y +P +++ + + LS+ D V + V SV+
Sbjct: 778 ----KQILIDYNENPEWYSISEETIDAIFQLSSEPDRVCSDVIKTKAVAVFGDNRASVEN 833
Query: 835 SK--LGRYLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKD 892
L + LFI+ H+A+ +V++E + +K+K + E + +N++T D ++
Sbjct: 834 PDVALSQLLFIVGHVAIKTIVFLEKLEGQFKKKKHEAESKKGTANS--NNSSTAADAQEE 891
Query: 893 TSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNK 950
EL + SED D + E+E++ G S L+G + + C + +
Sbjct: 892 AEGENELEMIGGTSEDDFADAVVHVKERELLYGDYS---LLGRFGPLVKEICAHPKQFSN 948
Query: 951 YPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNL 1010
LQ SA+L L + M + + YC+ NL LL ++E S + R NC + LGD+AV F N+
Sbjct: 949 L-RLQRSAVLCLTKLMCVSSIYCEENLPLLLQIMEKSDDPVTRCNCVLGLGDVAVCFNNI 1007
Query: 1011 LEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLA 1070
++ TE +Y+RL D ++ V++ ++ ++ LIL +KVKG ++ MA +E+ DQ IS++
Sbjct: 1008 VDENTEYIYSRLTDENIMVQRTCLMTVTFLILAGQVKVKGQLSSMAKCLENPDQSISDMC 1067
Query: 1071 KLFFHELSKKGNNPIYNLLPDILGKLCN-QNLKTESFCNIMQLLIGFIKKDKQMEALVEK 1129
+LFF EL+ K +N IYN DI L N + L + I++ L+GFI K+K + L EK
Sbjct: 1068 RLFFAELATK-DNAIYNGFIDIFSGLSNDETLAKDEMKRIIRFLVGFIDKEKHQKQLAEK 1126
Query: 1130 LCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIE 1165
L R QW+ +++ L + + + +E
Sbjct: 1127 LLARLPKCQSENQWQDVAFVLQTIPYKNDAITAALE 1162
Score = 211 (79.3 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 101/493 (20%), Positives = 206/493 (41%)
Query: 65 QDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRL 124
Q+L + + L F L + L + S+L+ + + ++ + DN +D +
Sbjct: 47 QELLEDLIELTHGFRELEEKKRHQLAYLVTSSLNAVGQSYGNMFQSGDFHDN----VDTI 102
Query: 125 SSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQPVNSWNWDPQRGRILNLIA 184
S + F L+ + ++F+ N + + S + + G L +
Sbjct: 103 KSTLERYGYLMFVLLKYLGKEDFSQVGNARSQKSVPREVSARWKSNCTEVENG--LTAVI 160
Query: 185 NSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGACATKYHY 244
L ++L +F ++ ++++ R + E+ +K K + R + TK+ +
Sbjct: 161 TVLNLDLSKVFVTTPERDSFVELFSRPIINLMESPERMKLVPIKLLIFRALCIAVTKHKH 220
Query: 245 IEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVG 304
SI+ + Y + +MA + +KY L ++REI +T+ + DT G
Sbjct: 221 GSMLQHSIIQCLTYYAHLPQYMAGLLHTLTEKYDYMVLTEEILREISQTHFNS--NDTNG 278
Query: 305 AENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDI---E 361
+ + FL++L++ P+LI + + + +R ++V G +V K+ +
Sbjct: 279 PKAVSEFLIKLSELSPRLILRQMTSISQLLDNSNQTLRCSVVEACGNIVVDILKNSTRDQ 338
Query: 362 GEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVA 421
GE +L +L ER D + Y R++ Q +++ + ++ +A
Sbjct: 339 GEDEDADYYRHQVAKLLNLLEERFLDQNPYVRTKAFQALSKVADLKVKLTERRQKMMMLA 398
Query: 422 AGRLEDKSAIVRKSALNLLVMMLQHNPF----GPQLRIASFEATLDEYRKKLNGLEP-DI 476
LED+S +VR++A+ L+ ++ ++ F G QL + ++ L + +L P D+
Sbjct: 399 VRSLEDRSTLVRRNAIKLMSKLILNHQFQGSHGTQLALTFWKQKLKDAEAELMKYIPADV 458
Query: 477 HSESITDGLPSDRGTCNGDG-EVDDLNAEVVVQEQQESLTDSCLPLADEGIADKDSSVPD 535
+ SD DG E D + E + Q E+ T P D DK+ V +
Sbjct: 459 QAGPEQQ---SDTSDVEDDGDESDKVEQENNLNGQAEA-TKKDEPTMD---IDKED-VSE 510
Query: 536 VGNLEQTRALVAS 548
G+ E +VA+
Sbjct: 511 EGDREGESDIVAN 523
Score = 37 (18.1 bits), Expect = 9.6e-48, Sum P(2) = 9.6e-48
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 475 DIHSESITDGLPSDRGTCNGDGEV-DDL 501
D ESITD L ++ + N + E+ +DL
Sbjct: 26 DSKLESITDSLANNPESLNFNQELLEDL 53
>UNIPROTKB|Q59U69 [details] [associations]
symbol:YCS4 "Potential nuclear condensin complex subunit D"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR007673
InterPro:IPR016024 InterPro:IPR026971 PIRSF:PIRSF017127
CGD:CAL0001793 GO:GO:0005634 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0051301 GO:GO:0007076 eggNOG:COG5098
KO:K06677 InterPro:IPR024324 PANTHER:PTHR14222 Pfam:PF12922
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713140.1
RefSeq:XP_713186.1 STRING:Q59U69 GeneID:3645154 GeneID:3645196
KEGG:cal:CaO19.1883 KEGG:cal:CaO19.9439 Uniprot:Q59U69
Length = 1172
Score = 552 (199.4 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 191/756 (25%), Positives = 353/756 (46%)
Query: 450 GPQLRIASFEATLDEYRKKLNGLEP-DIHS----ESITDGLPSDRGTCNGDGEVDDLNAE 504
G QL + ++ L + +L P D+ + +S T + D + + ++LN +
Sbjct: 431 GTQLALTFWKQKLKDAEAELMKYIPADVQAGPEQQSDTSDVEDDGDESDKVEQENNLNGQ 490
Query: 505 VVVQEQQESLTD-SCLPLADEG--------IADKDS---SVPDVGNLEQTRALVASLEAG 552
++ E D +++EG +A+ S ++PD L + + +
Sbjct: 491 AEATKKDEPTMDIDKEDVSEEGDREGESDIVANTSSFNDNLPDATVLARVKLTANYYKDA 550
Query: 553 LRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVL---S 609
+ F + V + L+ S + ++ + + L+ + ++ + + KML LV S
Sbjct: 551 VDFVEAVQHGTDVISGLLFSKNRNEAIDAMDFLVLADAYGVENSHVGIRKMLHLVWMKGS 610
Query: 610 QD--KSI----YEAVENAFITIYVRKSPVETA----KNLLNLAIDSNIGDQAAMEFIVGT 659
D KS+ + ++ F+ S +E A KNL+ L + +++ D A++E ++G
Sbjct: 611 SDEGKSVPAHLIDCYKSLFLIAPNSASKIEKATYIAKNLIGLTLKASVADLASLEKLLGL 670
Query: 660 LVSKGDVSMSTISALWDFFCFNVSGTTPE---KSRAALSVLCMAAKSSAAVLGSHLQDII 716
+ + ++ I+ LW + N+S + E + R A+ +L M + + ++
Sbjct: 671 MYAAMMINFEVINVLWQIY--NLSDRSEEVRRQKRGAIIILGMLSLEDNQIAIKGFDSLL 728
Query: 717 DIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRVFATLESLITGFWLPDNIWY 776
+IG G K + +L R CIA+QR+ D KK S ++ E IT F
Sbjct: 729 NIGLGDEGKDDLILGRYTCIALQRVIPADAKKN--STMVKI-PREEEAITKF-------- 777
Query: 777 TAADKAISAIYTIHPTPETLAVDLVKK--SLSAVFDYVGGEEPHNGIDCVGTSMPTSVQV 834
K I Y +P +++ + + LS+ D V + V SV+
Sbjct: 778 ----KQILIDYNENPEWYSISEETIDAIFQLSSEPDRVCSDVIKTKAVAVFGDNRASVEN 833
Query: 835 SK--LGRYLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKD 892
L + LFI+ H+A+ +V++E + +K+K + E + +N++T D ++
Sbjct: 834 PDVALSQLLFIVGHVAIKTIVFLEKLEGQFKKKKHEAESKKGTANS--NNSSTAADAQEE 891
Query: 893 TSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNK 950
EL + SED D + E+E++ G S L+G + + C + +
Sbjct: 892 AEGENELEMIGGTSEDDFADAVVHVKERELLYGDYS---LLGRFGPLVKEICAHPKQFSN 948
Query: 951 YPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNL 1010
LQ SA+L L + M + + YC+ NL LL ++E S + R NC + LGD+AV F N+
Sbjct: 949 L-RLQRSAVLCLTKLMCVSSIYCEENLPLLLQIMEKSDDPVTRCNCVLGLGDVAVCFNNI 1007
Query: 1011 LEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLA 1070
++ TE +Y+RL D ++ V++ ++ ++ LIL +KVKG ++ MA +E+ DQ IS++
Sbjct: 1008 VDENTEYIYSRLTDENIMVQRTCLMTVTFLILAGQVKVKGQLSSMAKCLENPDQSISDMC 1067
Query: 1071 KLFFHELSKKGNNPIYNLLPDILGKLCN-QNLKTESFCNIMQLLIGFIKKDKQMEALVEK 1129
+LFF EL+ K +N IYN DI L N + L + I++ L+GFI K+K + L EK
Sbjct: 1068 RLFFAELATK-DNAIYNGFIDIFSGLSNDETLAKDEMKRIIRFLVGFIDKEKHQKQLAEK 1126
Query: 1130 LCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIE 1165
L R QW+ +++ L + + + +E
Sbjct: 1127 LLARLPKCQSENQWQDVAFVLQTIPYKNDAITAALE 1162
Score = 211 (79.3 bits), Expect = 4.7e-66, Sum P(2) = 4.7e-66
Identities = 101/493 (20%), Positives = 206/493 (41%)
Query: 65 QDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRL 124
Q+L + + L F L + L + S+L+ + + ++ + DN +D +
Sbjct: 47 QELLEDLIELTHGFRELEEKKRHQLAYLVTSSLNAVGQSYGNMFQSGDFHDN----VDTI 102
Query: 125 SSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQPVNSWNWDPQRGRILNLIA 184
S + F L+ + ++F+ N + + S + + G L +
Sbjct: 103 KSTLERYGYLMFVLLKYLGKEDFSQVGNARSQKSVPREVSARWKSNCTEVENG--LTAVI 160
Query: 185 NSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGACATKYHY 244
L ++L +F ++ ++++ R + E+ +K K + R + TK+ +
Sbjct: 161 TVLNLDLSKVFVTTPERDSFVELFSRPIINLMESPERMKLVPIKLLIFRALCIAVTKHKH 220
Query: 245 IEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVG 304
SI+ + Y + +MA + +KY L ++REI +T+ + DT G
Sbjct: 221 GSMLQHSIIQCLTYYAHLPQYMAGLLHTLTEKYDYMVLTEEILREISQTHFNS--NDTNG 278
Query: 305 AENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDI---E 361
+ + FL++L++ P+LI + + + +R ++V G +V K+ +
Sbjct: 279 PKAVSEFLIKLSELSPRLILRQMTSISQLLDNSNQTLRCSVVEACGNIVVDILKNSTRDQ 338
Query: 362 GEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVA 421
GE +L +L ER D + Y R++ Q +++ + ++ +A
Sbjct: 339 GEDEDADYYRHQVAKLLNLLEERFLDQNPYVRTKAFQALSKVADLKVKLTERRQKMMMLA 398
Query: 422 AGRLEDKSAIVRKSALNLLVMMLQHNPF----GPQLRIASFEATLDEYRKKLNGLEP-DI 476
LED+S +VR++A+ L+ ++ ++ F G QL + ++ L + +L P D+
Sbjct: 399 VRSLEDRSTLVRRNAIKLMSKLILNHQFQGSHGTQLALTFWKQKLKDAEAELMKYIPADV 458
Query: 477 HSESITDGLPSDRGTCNGDG-EVDDLNAEVVVQEQQESLTDSCLPLADEGIADKDSSVPD 535
+ SD DG E D + E + Q E+ T P D DK+ V +
Sbjct: 459 QAGPEQQ---SDTSDVEDDGDESDKVEQENNLNGQAEA-TKKDEPTMD---IDKED-VSE 510
Query: 536 VGNLEQTRALVAS 548
G+ E +VA+
Sbjct: 511 EGDREGESDIVAN 523
Score = 37 (18.1 bits), Expect = 9.6e-48, Sum P(2) = 9.6e-48
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 475 DIHSESITDGLPSDRGTCNGDGEV-DDL 501
D ESITD L ++ + N + E+ +DL
Sbjct: 26 DSKLESITDSLANNPESLNFNQELLEDL 53
>UNIPROTKB|E7EN77 [details] [associations]
symbol:NCAPD2 "Condensin complex subunit 1" species:9606
"Homo sapiens" [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007076 EMBL:AC006064
HGNC:HGNC:24305 ChiTaRS:NCAPD2 InterPro:IPR024324 PANTHER:PTHR14222
Pfam:PF12922 IPI:IPI00445741 ProteinModelPortal:E7EN77 SMR:E7EN77
Ensembl:ENST00000382457 ArrayExpress:E7EN77 Bgee:E7EN77
Uniprot:E7EN77
Length = 919
Score = 338 (124.0 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 74/267 (27%), Positives = 146/267 (54%)
Query: 205 LSFVVRNAFLMFENATL--LKDADTKDALCRIIGACATKYHYIEQSCASIMHLIHKYDFV 262
L V + + EN T+ K+ T++A+ ++G T+Y+++ + I+ ++ ++ +
Sbjct: 67 LHLVTGCCYRLLENPTINHQKNRPTREAITHLLGVALTRYNHMLSATVKIIQMLQHFEHL 126
Query: 263 VVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKDTVGAENIGRFLVELADRLPKL 322
+ AV+ Y S+ ++REIG+ P+ +D G + FL ELA+R+P +
Sbjct: 127 APVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQELSRDPSGTKGFAAFLTELAERVPAI 186
Query: 323 ISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAMLEILL 382
+ +++ +L+ H GE+Y +RNA++ + ++V + + EA+++ T+ L+ L
Sbjct: 187 LMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLSGDQLEAAARD----TRDQFLDTLQ 242
Query: 383 ERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLVM 442
DV+++ RSRVLQ++ + ++ ++ + + V +A GRL DKS +V K+A+ LL
Sbjct: 243 AHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVVALAVGRLADKSVLVCKNAIQLLAS 302
Query: 443 MLQHNPFGPQLRIASFEATLDEYRKKL 469
L +NPF +L A L + +KL
Sbjct: 303 FLANNPFSCKLSDADLAGPLQKETQKL 329
Score = 319 (117.4 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 112/452 (24%), Positives = 208/452 (46%)
Query: 537 GN--LEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQID 594
GN L + LV L+ FS+ ++ + + ++M ++ + V+ I + QF +
Sbjct: 482 GNDELVKQEMLVQYLQDAYSFSRKITEAIGIISKMMYENTTTVVQEVIEFFVMVFQFGVP 541
Query: 595 GAEACLHKMLPLVLSQDKSIYEAVENAFITIYVR-KSPVETAK------NLLNLAIDSNI 647
A + +MLPL+ S++ + EAV NA+ +Y+ K AK NL L +D+++
Sbjct: 542 QALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQNLSLLLVDASV 601
Query: 648 GDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAV 707
G +E I+ V K ++ + LW+ V+ P + +++ +L M A+ +
Sbjct: 602 GTIQCLEEILCEFVQKDELKPAVTQLLWERATEKVA-CCPLERCSSVMLLGMMARGKPEI 660
Query: 708 LGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFAT 760
+GS+L ++ IG + LA+ C AI +S K L L R+F
Sbjct: 661 VGSNLDTLVSIGLDEKFPQDYRLAQQVCHAIANISDRRKPSLGKRHPPFRLPQEHRLFER 720
Query: 761 LESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHN 819
L +T GF PD +W + A++ IY + PE + +++ + + EE
Sbjct: 721 LRETVTKGFVHPDPLWIPFKEVAVTLIYQLAEGPEVICAQILQGCAKQALEKL--EEKRT 778
Query: 820 GIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVC-EIRKQKIKKEKMIADDQN 878
+ S P + L L + +A+ QLV++E V E+ ++++ +E+ ++
Sbjct: 779 SQEDPKES-PAMLPTFLLMNLLSLAGDVALQQLVHLEQAVSGELCRRRVLREEQEHKTKD 837
Query: 879 IHSNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCAS 936
N ++ +T++ ELGL A ++D + + + E E++ G K +
Sbjct: 838 PKEKNTSS-----ETTMEEELGLVGATADDTEAELIRGICEMELLDG----KQTLAAFVP 888
Query: 937 FLSKFCRNFSLMNKYPELQASAMLALCRFMII 968
L K C N L + P+L A+A LAL +F +I
Sbjct: 889 LLLKVCNNPGLYSN-PDLSAAASLALGKFCMI 919
Score = 39 (18.8 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 1114 IGFIKKDKQMEALVEKLCNRFSGVTDIRQ 1142
IG +K Q L +++C+ + ++D R+
Sbjct: 671 IGLDEKFPQDYRLAQQVCHAIANISDRRK 699
>WB|WBGene00001087 [details] [associations]
symbol:dpy-28 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0046536 "dosage
compensation complex" evidence=IPI] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0043073
"germ cell nucleus" evidence=IDA] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0045128 "negative regulation of
reciprocal meiotic recombination" evidence=IMP] [GO:0045144
"meiotic sister chromatid segregation" evidence=IMP] [GO:0000070
"mitotic sister chromatid segregation" evidence=IMP]
InterPro:IPR007673 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF017127 GO:GO:0009792 GO:GO:0040010 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0051301
GO:GO:0010171 GO:GO:0040011 GO:GO:0000070 GO:GO:0000794
GO:GO:0007076 GO:GO:0045128 GO:GO:0045144 GO:GO:0000805 KO:K06677
PANTHER:PTHR14222 GeneTree:ENSGT00390000017108 GO:GO:0043073
GO:GO:0046536 EMBL:AL021482 PIR:C88589 PIR:T26747
RefSeq:NP_499379.2 ProteinModelPortal:Q9U2M1 SMR:Q9U2M1
STRING:Q9U2M1 EnsemblMetazoa:Y39A1B.3 GeneID:176509
KEGG:cel:CELE_Y39A1B.3 UCSC:Y39A1B.3 CTD:176509 WormBase:Y39A1B.3
HOGENOM:HOG000076991 InParanoid:Q9U2M1 OMA:MENRRIP NextBio:892880
Uniprot:Q9U2M1
Length = 1499
Score = 266 (98.7 bits), Expect = 2.6e-25, Sum P(4) = 2.6e-25
Identities = 76/287 (26%), Positives = 146/287 (50%)
Query: 954 LQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEP 1013
++ +A +A + M + A+ F+ + S S ++R N A D A P L E
Sbjct: 1141 IRHAATVAYGKMMPLSAEISAFAAPSFFSAMTKSSSILLRCNLVAACCDFAFAQPTLFEL 1200
Query: 1014 WTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLF 1073
+ ++++ +D S R++ +LVLSHL+ NDM++ +G ++E A + D + + ++A+ F
Sbjct: 1201 FAQSLFRMSQDESPLARESTILVLSHLMSNDMIQTRGVLSEAARCICDPTRAVRDVAQSF 1260
Query: 1074 FHELSKKGNNPIYNLLPDILGKLCNQN--LKTESFCNIMQLLIGFIK-KDK-QMEALVEK 1129
F EL+ + + I LLP+ L L N N + +S+ + + LI +K K K ++++++
Sbjct: 1261 FKELNSR-TDTIIQLLPEFLYHLSNGNERMSFKSYKTVFEFLIQLLKDKPKASADSMIDR 1319
Query: 1130 LCNRFSGVTDIRQWEYISYCLSQLA-FTEK--GMKKLIESFKTYEHALSEDSVMDNFRNI 1186
+C +FS TD+ E Y L LA F + G+ +L ++++ + + SV +R +
Sbjct: 1320 VCIKFSN-TDMNDSETPKYLLVALAKFVQNDGGLHRLQDNWRHWSKFMCHPSVAKEYRMM 1378
Query: 1187 INKSKKFAK-PEVKVCIEEFEEKLNKYHTEKKDQEATTRNAQIHQQK 1232
+ +K E K E + +NK +E +E + I + K
Sbjct: 1379 VEHMHSTSKNDEFKSQCVELIDNINKIESEGLRKEDVAIGSSITKNK 1425
Score = 98 (39.6 bits), Expect = 2.6e-25, Sum P(4) = 2.6e-25
Identities = 32/127 (25%), Positives = 60/127 (47%)
Query: 505 VVVQEQQESLTDSC--LPLADEGIADKDSSVPDVGN-LEQTRALVASLEAGLRFSKCVSS 561
VV Q +++ +T + D+ + + + D N + Q RA V L + + +S
Sbjct: 640 VVAQAEEDYVTFKVQLTQMDDDQLLENEQEARDRNNQIMQLRAQVQQLINKMSIEQELSR 699
Query: 562 TMPTLVQLMASSSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVL--SQD--KSIYEA 617
+ ++ + + ++++ I L RCK F+I GA+ + M LV S D + EA
Sbjct: 700 CVTIALRCVLNGETAEIKEGIRFLTRCKLFEITGADDAIRSMCSLVWRPSADILNELIEA 759
Query: 618 VENAFIT 624
E+ FI+
Sbjct: 760 AEDMFIS 766
Score = 81 (33.6 bits), Expect = 2.6e-25, Sum P(4) = 2.6e-25
Identities = 28/109 (25%), Positives = 47/109 (43%)
Query: 368 SVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWN-EVAEVAAGRLE 426
S RL+ ++ + + LL D + RS+ + + + E + + + + RL
Sbjct: 421 SRRLK-REGIFKRLLAHTNDEATNVRSKAVSLLRNIMENRRIPEEFESCGLLSIVGSRLN 479
Query: 427 DKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKL-NGLEP 474
DKS VRKSA+ L L +N G + L+ +L N EP
Sbjct: 480 DKSVQVRKSAIQFLTTFLDNNRHGHDFNREMHQLKLNAKCSELRNAEEP 528
Score = 73 (30.8 bits), Expect = 2.7e-05, Sum P(5) = 2.7e-05
Identities = 28/124 (22%), Positives = 57/124 (45%)
Query: 1021 RLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMA---IRVEDEDQRISNLAKLFFHEL 1077
+L DP +AV +A+ ++S IL K++ + + ++ +D ++ KLFF+E+
Sbjct: 882 KLMDPELAV--DALRIIS--ILGTPTKLENEQDAYSRPLFKIHQDDSLWKSIEKLFFYEI 937
Query: 1078 SKKGNNPIYNLLPDILGKLCNQNLKTESFCNIM--QLLIGFIKKDKQMEALVEKLCNRFS 1135
K +NP + ++ L N+M +L F+ + K++ C++
Sbjct: 938 MKADDNPDRDWF-GVIRLTITTILSLSMDVNVMLPKLASHFVYRTKRISDFFLFYCDQVD 996
Query: 1136 GVTD 1139
TD
Sbjct: 997 DATD 1000
Score = 42 (19.8 bits), Expect = 2.6e-25, Sum P(4) = 2.6e-25
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 172 W-DPQRGRILNLIANSLEINLPLLFGSSDPDENYL 205
W D QR R++N + LE+ + + G+ Y+
Sbjct: 200 WKDIQRHRMINCLLELLELRVDTVAGTKKKAIQYV 234
Score = 42 (19.8 bits), Expect = 2.7e-05, Sum P(5) = 2.7e-05
Identities = 18/114 (15%), Positives = 36/114 (31%)
Query: 1211 KYHTEKKDQEATTRNAQIHQQKVNTMGNSVADRNXXXXXXXXXXXXXXXXXXPSAKRTNQ 1270
+Y + +T++N + Q V + N + AK+
Sbjct: 1374 EYRMMVEHMHSTSKNDEFKSQCVELIDNINKIESEGLRKEDVAIGSSITKNKGRAKKNPT 1433
Query: 1271 YINNISKSQSDGSEEHSGASSEVTETETGDIEVQSPRVMMKGTKSRAKKSTLKD 1324
++ S++ S + A E +P + +AKKS + D
Sbjct: 1434 TMSGSSRTTSRAANSRRRAPPPAQSDEDDSDSDDAPAAPRSAARRKAKKSAVAD 1487
Score = 37 (18.1 bits), Expect = 2.2e-21, Sum P(3) = 2.2e-21
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 108 SRVSQSQDNETPVLDRLSSHRNAFKIYTFFLISIVLAQEFNI 149
++ S+ ++ E P + NAF+ F L + V + ++I
Sbjct: 517 AKCSELRNAEEPQSKAIQGAENAFRQNLFTLTAGVRVEVYDI 558
>TAIR|locus:2130869 [details] [associations]
symbol:AT4G15890 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
InterPro:IPR012371 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF036508 EMBL:CP002687 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0007076 EMBL:Z97339 PANTHER:PTHR14222
GO:GO:0000799 KO:K11491 EMBL:AL161542 IPI:IPI00534666 PIR:A85176
PIR:F71424 RefSeq:NP_193324.1 UniGene:At.33133
ProteinModelPortal:O24610 STRING:O24610 PRIDE:O24610
EnsemblPlants:AT4G15890.1 GeneID:827271 KEGG:ath:AT4G15890
TAIR:At4g15890 HOGENOM:HOG000085096 InParanoid:O24610 OMA:SIQEECE
PhylomeDB:O24610 ProtClustDB:CLSN2685620 ArrayExpress:O24610
Genevestigator:O24610 Uniprot:O24610
Length = 1314
Score = 151 (58.2 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 36/137 (26%), Positives = 64/137 (46%)
Query: 944 NFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDL 1003
N L K P L + + L + + + D L L +E S +R+N +A+ D
Sbjct: 852 NVCLKQKAPLLYSQSWLTMAKMCLADGKLAKRYLPLFAQELEKSDCAALRNNLVVAMTDF 911
Query: 1004 AVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYIN-EMAIRVEDE 1062
V + ++E + + RL+DP VR+ ++LS L+ D +K +G + + + DE
Sbjct: 912 CVHYTAMIECYIPKITKRLRDPCEVVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDE 971
Query: 1063 DQRISNLAKLFFHELSK 1079
++I LA F + K
Sbjct: 972 SEKIRRLADFLFGSILK 988
Score = 59 (25.8 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 33/124 (26%), Positives = 58/124 (46%)
Query: 336 GESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAM--LEILLERCRDVSAYTR 393
G+S R V ++ L++ + G+ SS++ L+ + ++ L++RC D SA R
Sbjct: 326 GKS-NFRVLAVDIIPLLISSLGNPL-GDISSEN-GLKDSWGLGCIDALVQRCSDTSALIR 382
Query: 394 SRVLQVWAELCE-----EHSVSI-----GLWNEVAEVAAGRLED---KSAIVRKSALNLL 440
+R L A++ E E S SI G E +E G + D K + K+A+
Sbjct: 383 ARALSNLAQVVEFLSGDERSRSILKQALGFNGETSE-GKGAVTDLLKKRCVDEKAAVRRA 441
Query: 441 VMML 444
++L
Sbjct: 442 ALLL 445
Score = 52 (23.4 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 26/116 (22%), Positives = 52/116 (44%)
Query: 600 LHKMLPLVLSQDKSIYEAVENAFITIYVRKSPVETAKNLLN---LAIDSNIGDQAA---- 652
LH + +++ + SI E EN F + + + + A N+L+ ++ +N +
Sbjct: 501 LHSVPRMIMDNETSIQEECENVFHELVLER--ILRAGNVLSPDSASLPNNRNTTSKDLDR 558
Query: 653 -ME--FIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSA 705
+E F G LV ++ S +S C ++ K R AL++ C+ +S +
Sbjct: 559 DIEALFPEGVLVLLRELCNSEVSPWVTKICGSLGKKKRLKPRVALALQCIIKESES 614
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 27/124 (21%), Positives = 57/124 (45%)
Query: 10 NLQALEEQEDEE--HDGNRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDL 67
++Q L+EQ DE+ + +A + + + + ++ + DL+D L IE +L
Sbjct: 663 DVQGLDEQGDEQGVECNSSTWAGDRVCLLQTISNVSLQLPAEPAADLADNLLKKIENFNL 722
Query: 68 FDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSH 127
+ + +L CK S +++ V V+ +S + S+ E ++ +SSH
Sbjct: 723 HSA--EVDAHVKALKTLCKKKASTSEEADMLVK-KWVEQVS-LKASKVTEK-YIEGVSSH 777
Query: 128 RNAF 131
++F
Sbjct: 778 NHSF 781
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 374 KQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWN-EVAEVAAGRLEDKSAIV 432
K A+ ++L +RC D A R L + +L S+ G ++ + + D +
Sbjct: 420 KGAVTDLLKKRCVDEKAAVRRAALLLVTKLT---SLMGGCFDGSILKTMGTSCSDPLISI 476
Query: 433 RKSALNLL 440
RK+A++ +
Sbjct: 477 RKAAVSAI 484
Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(4) = 3.8e-05
Identities = 29/160 (18%), Positives = 67/160 (41%)
Query: 463 DEYRKKLNGLEPDIHSESITDGLPSDRGTCNGDGEVDDLNAEVVVQEQQESLTDSCLPLA 522
D KK+ ++HS + + + + C + A+++V++ E ++ +
Sbjct: 711 DNLLKKIENF--NLHSAEVDAHVKALKTLCKKKASTSE-EADMLVKKWVEQVSLKASKVT 767
Query: 523 D---EGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSS--TMPTLVQLMASSSASD 577
+ EG++ + S L R+ + SK V++ T+ + V + S+ +
Sbjct: 768 EKYIEGVSSHNHSFVTPATLGSRRSKRLDT-VSKKLSKAVTAVYTIGSCVIIYPSADTTK 826
Query: 578 VE---NTILLL----MRCKQFQIDGAEACLHKMLPLVLSQ 610
+ +T++ + K ++ A CL + PL+ SQ
Sbjct: 827 IVPFLHTVITSGNSDSKLKN-KLPQANVCLKQKAPLLYSQ 865
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 417 VAEVAAGRLEDKSAIVRKSALNLLVMML 444
V ++ R D+ A VR++AL LLV L
Sbjct: 423 VTDLLKKRCVDEKAAVRRAAL-LLVTKL 449
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 10 NLQALEEQEDEEHDGNRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIEEQDLFD 69
+L++L + +D+E NR Y S++SM S L + + L +
Sbjct: 29 DLKSLLDTDDDEIL-NRFYG----SLSSMASSFLRCISAAMDSPVESGRLAILASDAYLS 83
Query: 70 RVYSL-IRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQ 114
+ S F+ SP LSL+ S+R L DS + S SQ
Sbjct: 84 LLLSTNCPVFTFFSPIAFLSLLGSIRRYLK---RRDDSAGQGSNSQ 126
>UNIPROTKB|F1MPS0 [details] [associations]
symbol:NCAPD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
InterPro:IPR012371 InterPro:IPR016024 InterPro:IPR026971
PIRSF:PIRSF036508 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0007076 GO:GO:0031618 PANTHER:PTHR14222
GO:GO:0000799 CTD:23310 KO:K11491 OMA:NLLQEEF
GeneTree:ENSGT00390000011258 EMBL:DAAA02041852 EMBL:DAAA02041851
IPI:IPI00711469 RefSeq:NP_001180042.1 UniGene:Bt.9997
Ensembl:ENSBTAT00000039478 GeneID:511958 KEGG:bta:511958
NextBio:20870181 Uniprot:F1MPS0
Length = 1482
Score = 124 (48.7 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 36/134 (26%), Positives = 67/134 (50%)
Query: 954 LQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEP 1013
++A A++ L + + D ++ +L +E V +N I L DL VR+ L++
Sbjct: 922 VRAHAVITLGKLCLQHDDLAKESVPVLVRELEVGIDGNVLNNIVIVLCDLCVRYTALVDK 981
Query: 1014 WTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYIN-EMAIRVEDEDQRISNLAKL 1072
+ + LKDP+ VRK A+L+L+ L+ D ++ KG + I V D + +++ ++
Sbjct: 982 YIPTICTCLKDPNPFVRKQALLLLTGLLQEDFVRWKGCLFFRFVITVVDPNPEVASTGEV 1041
Query: 1073 FFHELSKKGNNPIY 1086
L K N I+
Sbjct: 1042 CLVHLLLKRNPTIF 1055
Score = 78 (32.5 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 335 GGESYKIRNALVGVLGKLVAKAFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRS 394
G E +R + V VL L+ D+EG Q L IL +RCRDV+ R
Sbjct: 553 GDEKTSVRKSAVQVLVNLLKHC--DVEG-----------LQDELSILQDRCRDVAVSVRK 599
Query: 395 RVLQVWAEL--CEEHSVSIG-LWNEVAEVAAGRLEDKSAIVRKS--ALN-LLVMMLQHNP 448
+ LQ EL + V I W + V +D+S++ K+ L+ LL+ +QH+
Sbjct: 600 QALQSLTELLLAQPQRVQIQKAW--LGGVVPAVTDDESSVQDKALECLDRLLLQSIQHHS 657
Query: 449 FG 450
G
Sbjct: 658 EG 659
Score = 74 (31.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 27/97 (27%), Positives = 41/97 (42%)
Query: 360 IEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAE 419
I ++S + R + L L R D R +QV L + V GL +E++
Sbjct: 527 IHTDSSGEGARSMAEMGFLVSLRNRVGDEKTSVRKSAVQVLVNLLKHCDVE-GLQDELS- 584
Query: 420 VAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIA 456
+ R D + VRK AL L +L P Q++ A
Sbjct: 585 ILQDRCRDVAVSVRKQALQSLTELLLAQPQRVQIQKA 621
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 358 KDIEGEASSKSVR-LRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVS 410
++++G + + + L+ K + EIL+ RC+D + RS+ L +A LC E S +
Sbjct: 426 REVDGPLAPEHEKFLKHKFLVQEILVARCKDKAPTVRSKALSSFA-LCLESSAT 478
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 19/97 (19%), Positives = 40/97 (41%)
Query: 520 PLADEGIADKDSSVPDVGNLEQTRALVASLE-AGLRFSKCVSSTMPTLVQLMASSSASDV 578
P A + DSS ++ + LV+ G + S + LV L+ +
Sbjct: 520 PSAGSEVIHTDSSGEGARSMAEMGFLVSLRNRVGDEKTSVRKSAVQVLVNLLKHCDVEGL 579
Query: 579 ENTILLLM-RCKQFQIDGAEACLHKMLPLVLSQDKSI 614
++ + +L RC+ + + L + L+L+Q + +
Sbjct: 580 QDELSILQDRCRDVAVSVRKQALQSLTELLLAQPQRV 616
Score = 40 (19.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 837 LGRYLFILSHIAMNQLVYIESCVCEIRKQKI 867
LG L ++ HIA + V ++ K+K+
Sbjct: 757 LGHILCVIRHIAKHLPQSTRDMVADVLKKKL 787
>UNIPROTKB|F1NS98 [details] [associations]
symbol:F1NS98 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000799 "nuclear condensin complex"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] InterPro:IPR012371 InterPro:IPR016024
InterPro:IPR026971 PIRSF:PIRSF036508 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007076 GO:GO:0031618
PANTHER:PTHR14222 GO:GO:0000799 OMA:NLLQEEF
GeneTree:ENSGT00390000011258 EMBL:AADN02041910 IPI:IPI00585875
Ensembl:ENSGALT00000002261 Uniprot:F1NS98
Length = 1485
Score = 121 (47.7 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 36/136 (26%), Positives = 67/136 (49%)
Query: 952 PELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLL 1011
P ++A A + L + + D + L +E S VR+N I + DL VR+ ++
Sbjct: 893 PVIRAHAFITLGKLCLQHEDLAKKCIAALARELEVSHDVAVRNNVVIVMCDLCVRYTTMV 952
Query: 1012 EPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRV-EDEDQRISNLA 1070
+ + N+ LKDP +RK ++++++L+ + +K K + I V D + I+ A
Sbjct: 953 DRYIPNISLCLKDPHPFIRKQTLILITNLLQEEFVKWKDCLFFRFITVLVDPNPDIARFA 1012
Query: 1071 KL-FFHELSKKGNNPI 1085
+ H L K+ NP+
Sbjct: 1013 EFCLVHLLLKR--NPV 1026
Score = 62 (26.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 378 LEILLERCRDVSAYTRSRVLQVWAELCE-EHS-VSIG-LWNEVAEVAAGRLEDKSAIVRK 434
L L +RCRD + R + LQ EL E +H+ V + W + V ++ +S++ K
Sbjct: 560 LSTLQDRCRDPAVSVRKQALQSVTELLEAQHNDVLVHKAW--LTGVVPVVMDSESSVQEK 617
Query: 435 SALNLLVMMLQH 446
+ L ++LQH
Sbjct: 618 ALECLDQILLQH 629
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1342 1324 0.00085 124 3 11 22 0.40 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 627 (67 KB)
Total size of DFA: 534 KB (2245 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 128.30u 0.08s 128.38t Elapsed: 00:00:10
Total cpu time: 128.32u 0.08s 128.40t Elapsed: 00:00:10
Start: Tue May 21 01:10:42 2013 End: Tue May 21 01:10:52 2013