BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000705
(1342 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9YHY6|CND1_XENLA Condensin complex subunit 1 OS=Xenopus laevis GN=ncapd2 PE=1 SV=1
Length = 1364
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 254/806 (31%), Positives = 434/806 (53%), Gaps = 61/806 (7%)
Query: 537 GNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQFQIDGA 596
++++ LV L F+ + + + ++M ++ S V+ I + QF + A
Sbjct: 596 SDMDKQEMLVQYLSDAHHFALKIEEAIDVISKMMYETAVSVVQEVIEFFVTVSQFGVSQA 655
Query: 597 EACLHKMLPLVLSQDKSIYEAVENAFITIYV-------RKSPVETAKNLLNLAIDSNIGD 649
+ +MLPLV S++ + EAV +A+ +Y+ R ++L L +DS+ G
Sbjct: 656 LLGVRRMLPLVWSKEPGVREAVLSAYRRLYLSSNGESERVKAQALVRSLSLLMVDSSAGI 715
Query: 650 QAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVLCMAAKSSAAVLG 709
+E IV V KGD+ S I LW+ F + E+ RAA+ +L M + ++
Sbjct: 716 LQCLEEIVSEFVQKGDIHPSVIQLLWEKFTQKSPCSEFER-RAAVMLLGMMTRGQPEIVM 774
Query: 710 SHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------LLSYGSRVFATL- 761
S+L ++ +G G + + LAR C I +++ K+ L L +F L
Sbjct: 775 SNLDTLVSVGLGEQVQKDYQLAREVCNCILKITDSQKQTLGKSTEPFRLPKDHSLFVCLT 834
Query: 762 ESLITGFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGI 821
E++ G L W + A+ +Y + PE + +++ + V D G + + +
Sbjct: 835 EAVAGGIGLSGLHWLPFKETAVRLVYELGEEPEEICSEILLRCSQNVLD---GHQTQDEV 891
Query: 822 DCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCV-CEIRKQKIKKEKMIADDQNIH 880
V + L L + +A+ Q+V++E V E+R++++ KE+ A+
Sbjct: 892 PNVPAFL--------LTHLLSLAGDVALQQVVHLERAVSAELRRRRVLKEEQEAEKVGKQ 943
Query: 881 SNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFL 938
+ N ++++ ELGL A+++D + + + + + E++ G + ++FL
Sbjct: 944 RKSKAN-----ESTMEEELGLVGASADDIEAELIRKICDTELLGGQQ-------YLSAFL 991
Query: 939 SKFCRNFSLMNKY--PELQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNC 996
R + +Y P+L A LAL ++M+I +D+CD +L+LLFT++E SP VRSN
Sbjct: 992 PLILRICNNPGRYSDPDLCTVATLALAKYMMISSDFCDTHLRLLFTLLEKSPLPSVRSNI 1051
Query: 997 TIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMA 1056
IALGDL++RFPNL+EPWT N+YARL+DPS VRK A +V++HLIL DM+KVKG ++EMA
Sbjct: 1052 MIALGDLSIRFPNLIEPWTPNLYARLRDPSREVRKTAGMVMTHLILKDMVKVKGQVSEMA 1111
Query: 1057 IRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQN--LKTESFCNIMQLLI 1114
+ + + DQ IS LA+ FF+ELS KGN +YNLLPDI+ +L + + ++ E+F IM+ L+
Sbjct: 1112 VLLIESDQEISALARNFFNELSNKGNA-VYNLLPDIISRLSDPDCGVEEEAFRTIMKQLL 1170
Query: 1115 GFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIESFKTYEHAL 1174
+I KDKQ E+LVEK+C+RF RQW +++CLS L F+EKG++K+ + F Y L
Sbjct: 1171 SYITKDKQTESLVEKMCHRFRTARTERQWRDLAHCLSLLPFSEKGLRKMQDCFDCYGDKL 1230
Query: 1175 SEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKDQEATTR--NAQIHQQK 1232
S+++V ++F + K ++ AKPE+K I+EFE+KL++ H + + +A+ Q
Sbjct: 1231 SDEAVYNSFLTTVAKMRRGAKPELKALIDEFEQKLSRCHNKGLENMDVPEEPSAESDAQP 1290
Query: 1233 VNTMGNSVADRNAGEESAESDISEDDESIGPSAKRTNQYINNISKSQSDGSEEHSGASSE 1292
+A N + +E D ++ P A R ++ ++ S S+E S +E
Sbjct: 1291 PKAKRPPLASVNVKKGKSEDDF----QTPKPPASRKSRRKVAVNFS----SDEESDLEAE 1342
Query: 1293 VTETETGDIEVQSPRVMMKGTKSRAK 1318
++E ET ++P + + +SRAK
Sbjct: 1343 LSEAETP----KNPTPIRRTARSRAK 1364
Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 212/427 (49%), Gaps = 35/427 (8%)
Query: 60 FCIEEQDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETP 119
CI + FD +YS++ +F SL + K ++E + +V+ NE P
Sbjct: 51 LCILQH--FDTLYSILHHFRSLDIAIKEDVLEVM--------------VKVASRHANELP 94
Query: 120 -VLDRL-------SSHRNAFKIYTFFLISIVLAQEFNISSNN----NPKVTASTRKKQPV 167
+L+ L ++H NA K+ F L ++ A E + P K +P
Sbjct: 95 AILEDLNLSVPQRAAHLNALKMNCFILTQLIEAFEAETYKASLGSVEPSGKGKKAKSKP- 153
Query: 168 NSWNWDPQRGRILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLL--KDA 225
++W+ +R IL + + L++++ L+ S +E ++S + + M EN ++ K+
Sbjct: 154 EGFSWESERESILQALTHLLQLDIRRLWSMSVVEEEFVSMMTSCCYKMMENPNIVMAKNK 213
Query: 226 DTKDALCRIIGACATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATY 285
T++AL ++G +Y+++ + ++ L+ ++ + + V+ +Y +
Sbjct: 214 STREALGHLLGVTVKRYNHMLSASVKVIQLLQHFEHLASVLVHTVSLWATEYGMKPVIGE 273
Query: 286 LIREIGRTNPKAYVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNAL 345
++REIG+ + +++ G + FL ELA+R+P ++ +I VL+ + GE+Y +RN++
Sbjct: 274 IMREIGQKCSQDLSRESSGFKAFATFLTELAERIPAIMMPSISVLLDYLDGENYMMRNSV 333
Query: 346 VGVLGKLVAKAFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCE 405
+ V+G++V + + E + KS R L+ L E DV+ Y RS V+Q++ + +
Sbjct: 334 LTVMGEMVVRVLSGDQLEEAEKSSR----DQFLDTLQEHLHDVNTYVRSCVIQIYNRIVQ 389
Query: 406 EHSVSIGLWNEVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEY 465
E ++ + + V + GRL DKS V K+A+ LL L +NPF +L + L++
Sbjct: 390 EKALPLSRFQSVVTLVVGRLFDKSVNVCKNAIQLLASFLANNPFTCKLSSVDLKVPLEKE 449
Query: 466 RKKLNGL 472
KKL +
Sbjct: 450 TKKLKEM 456
>sp|Q8K2Z4|CND1_MOUSE Condensin complex subunit 1 OS=Mus musculus GN=Ncapd2 PE=1 SV=2
Length = 1392
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 260/812 (32%), Positives = 425/812 (52%), Gaps = 52/812 (6%)
Query: 523 DEGI-ADKDS-SVPDV------GNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSS 574
D G+ KDS SVP+ L + LV L+ FS+ ++ + + ++M ++
Sbjct: 580 DPGLTGSKDSPSVPEPEGSQSNDELVKQEMLVQYLQDAYGFSQKITEAIGIISKMMYENT 639
Query: 575 ASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYV------- 627
+ V+ I + QF + A + +MLPL+ S++ + EAV NA+ +Y+
Sbjct: 640 TTVVQEVIEFFVMVFQFGVPQALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSA 699
Query: 628 RKSPVETAKNLLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTP 687
R NL L +D+++G +E I+ V K +V + I LW+ V +
Sbjct: 700 RAKAQTLIHNLSLLLVDASVGTIQCLEEILCEFVQKDEVKPAVIQLLWERATEKVPSSPL 759
Query: 688 EKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKK 747
E+ + + +L M A+ ++GS+L ++ +G + + LA+ C+AI +S K
Sbjct: 760 ERCSSVM-LLGMMARGKPEIVGSNLDALVRVGLDEKSPQDYRLAQQVCLAIANISDRRKP 818
Query: 748 KL-------LLSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVD 799
L L R+F L+ ++T GF PD +W + A++ Y + +P+ L
Sbjct: 819 SLGERHPPFRLPQEHRLFERLQDMVTKGFAHPDPLWIPFKEVAVTLTYQLAESPDVLCAQ 878
Query: 800 LVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCV 859
+++ V + + +PT + L L + +A+ QLV++E V
Sbjct: 879 MLQGCAKQVLEKLEKNATEADPKETAPRLPTFL----LMNLLSLAGDVALQQLVHLEQAV 934
Query: 860 CEIRKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGL---AASEDAKLDTLSEKA 916
++ + +++ ++Q + +T++ ELGL A ++D + + +
Sbjct: 935 S----GELGRRRVLREEQEHRAKEPKEKTASSETTMEEELGLVGGATADDTEAELIRSIC 990
Query: 917 EKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDAN 976
EKE++ G ++ L K C N L + PEL A+A LAL +F +I A +CD+
Sbjct: 991 EKELLDGN----QVLAAFVPLLLKVCNNPGLYSN-PELCAAASLALGKFCMISAPFCDSQ 1045
Query: 977 LQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLV 1036
L+LLFT++E S VRSN +A GDLA+RFPNL++PWT ++YARL+DP+ VRK A LV
Sbjct: 1046 LRLLFTMLEKSSLPTVRSNLMVATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRKTAGLV 1105
Query: 1037 LSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKL 1096
++HLIL DM+KVKG ++EMA+ + D +I+ LAK FF+ELS KGN IYNLLPDI+ +L
Sbjct: 1106 MTHLILKDMVKVKGQVSEMAVLLIDPVPQIAALAKNFFNELSHKGNA-IYNLLPDIISRL 1164
Query: 1097 CNQ--NLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLA 1154
+ ++ E F IM+ L+ +I KDKQ E+LVEKLC RF RQ+ ++YC+SQL
Sbjct: 1165 SDPEGGVEEEPFHTIMKQLLSYITKDKQTESLVEKLCQRFRTARTERQYRDLAYCMSQLP 1224
Query: 1155 FTEKGMKKLIESFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHT 1214
TE+G++K++++F+ + L ++SV F +I+ K ++ AKPE K I+EFE+KL HT
Sbjct: 1225 LTERGLQKMLDNFECFGDKLLDESVFSAFLSIVGKLRRGAKPEGKAIIDEFEQKLRACHT 1284
Query: 1215 EKKDQEATTRNAQIHQQK-VNTMGNSVADRNAGEESAESD---ISEDDESIGPSAKRTNQ 1270
D Q Q+ ++ S R S +SD ++ P +T Q
Sbjct: 1285 RGMDGIEEFETGQGGSQRALSAKKPSAVSRLQPLTSVDSDNDFVTPKPRRTKPGRPQTQQ 1344
Query: 1271 YINNISKSQ----SDGSEEHSGASSEVTETET 1298
+ K++ SD S E S+E+TE ET
Sbjct: 1345 RKKSQRKAKVVFLSDESSEDE-LSAEMTEEET 1375
Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 218/424 (51%), Gaps = 16/424 (3%)
Query: 68 FDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRLSSH 127
FD VYS++ +F S+ P K +E L+ +S + S+ D DR S+H
Sbjct: 60 FDTVYSILHHFRSIEPGLKEDTLEFLKKVVSRHSQELSSIL-----DDAALSGSDR-SAH 113
Query: 128 RNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKK----QPVNSWNWDPQRGRILNLI 183
NA K+ + LI ++ + E S + + + K + ++W+ +R +L L+
Sbjct: 114 LNALKMNCYALIRLLESFENMTSQTSLIDLDIGGKGKRARAKATLGFDWEEERQPVLQLL 173
Query: 184 ANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATL--LKDADTKDALCRIIGACATK 241
L++++ L+ S +E ++S V + + EN T+ K+ TK+A+ ++G +
Sbjct: 174 TQLLQLDIRHLWNHSAIEEEFVSLVTGCCYRLLENPTISHQKNRSTKEAIAHLLGVALVR 233
Query: 242 YHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAYVKD 301
Y+++ + I+ ++ ++ + + AV+ Y S+ ++REIG+ P+ +D
Sbjct: 234 YNHMLSATVKIIQMLQHFEHLPPVLVTAVSLWATDYGMKSIVGEIVREIGQKCPQELSRD 293
Query: 302 TVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFKDIE 361
T GA+ FL ELA+R+P ++ N+ +L+ H GE+Y +RNA++ + ++V + +
Sbjct: 294 TAGAKGFAAFLTELAERIPAVLMANMCILLDHLDGENYMMRNAVLAAIAEMVLQVLNGDQ 353
Query: 362 GEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAEVA 421
E S++ T+ L+IL DV+++ RSRVLQ++A + ++ ++ + + V +A
Sbjct: 354 LEESARE----TRDQFLDILQAHGHDVNSFVRSRVLQLFARIVQQKALPLTRFQAVVALA 409
Query: 422 AGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLNGLEPDIHSESI 481
GRL DKS +V K+A+ LL L +NPF +L L + +KL + S +
Sbjct: 410 VGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDIDLAGPLQKEIQKLQEMRAQRRSAAA 469
Query: 482 TDGL 485
T L
Sbjct: 470 TAAL 473
>sp|Q15021|CND1_HUMAN Condensin complex subunit 1 OS=Homo sapiens GN=NCAPD2 PE=1 SV=3
Length = 1401
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/804 (31%), Positives = 420/804 (52%), Gaps = 58/804 (7%)
Query: 534 PDVGNLEQTRA---------LVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILL 584
P++ + E++R LV L+ FS+ ++ + + ++M ++ + V+ I
Sbjct: 600 PNMSDPEESRGNDELVKQEMLVQYLQDAYSFSRKITEAIGIISKMMYENTTTVVQEVIEF 659
Query: 585 LMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYV-------RKSPVETAKN 637
+ QF + A + +MLPL+ S++ + EAV NA+ +Y+ R +N
Sbjct: 660 FVMVFQFGVPQALFGVRRMLPLIWSKEPGVREAVLNAYRQLYLNPKGDSARAKAQALIQN 719
Query: 638 LLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVL 697
L L +D+++G +E I+ V K ++ + LW+ V+ E+ + + +L
Sbjct: 720 LSLLLVDASVGTIQCLEEILCEFVQKDELKPAVTQLLWERATEKVACCPLERCSSVM-LL 778
Query: 698 CMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKL-------L 750
M A+ ++GS+L ++ IG + LA+ C AI +S K L
Sbjct: 779 GMMARGKPEIVGSNLDTLVSIGLDEKFPQDYRLAQQVCHAIANISDRRKPSLGKRHPPFR 838
Query: 751 LSYGSRVFATLESLIT-GFWLPDNIWYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVF 809
L R+F L +T GF PD +W + A++ IY + PE + +++
Sbjct: 839 LPQEHRLFERLRETVTKGFVHPDPLWIPFKEVAVTLIYQLAEGPEVICAQILQGCAKQAL 898
Query: 810 DYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVCEIRKQKIKK 869
+ + EE + S P + L L + +A+ QLV++E V ++ +
Sbjct: 899 EKL--EEKRTSQEDPKES-PAMLPTFLLMNLLSLAGDVALQQLVHLEQAV----SGELCR 951
Query: 870 EKMIADDQNIHSNNNTNGDLPKDTSINAELGL--AASEDAKLDTLSEKAEKEIISGGSSQ 927
+++ ++Q + + + +T++ ELGL A ++D + + + E E++ G
Sbjct: 952 RRVLREEQEHKTKDPKEKNTSSETTMEEELGLVGATADDTEAELIRGICEMELLDG---- 1007
Query: 928 KNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFTVVESS 987
K + L K C N L + P+L A+A LAL +F +I A +CD+ L+LLFT++E S
Sbjct: 1008 KQTLAAFVPLLLKVCNNPGLYSN-PDLSAAASLALGKFCMISATFCDSQLRLLFTMLEKS 1066
Query: 988 PSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLILNDMMK 1047
P IVRSN +A GDLA+RFPNL++PWT ++YARL+DP+ VRK A LV++HLIL DM+K
Sbjct: 1067 PLPIVRSNLMVATGDLAIRFPNLVDPWTPHLYARLRDPAQQVRKTAGLVMTHLILKDMVK 1126
Query: 1048 VKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCNQNL--KTES 1105
VKG ++EMA+ + D + +I+ LAK FF+ELS KGN IYNLLPDI+ +L + L + E
Sbjct: 1127 VKGQVSEMAVLLIDPEPQIAALAKNFFNELSHKGNA-IYNLLPDIISRLSDPELGVEEEP 1185
Query: 1106 FCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEKGMKKLIE 1165
F IM+ L+ +I KDKQ E+LVEKLC RF RQ ++YC+SQL TE+G++K+++
Sbjct: 1186 FHTIMKQLLSYITKDKQTESLVEKLCQRFRTSRTERQQRDLAYCVSQLPLTERGLRKMLD 1245
Query: 1166 SFKTYEHALSEDSVMDNFRNIINKSKKFAKPEVKVCIEEFEEKLNKYHTEKKDQEATTRN 1225
+F + LS++S+ F +++ K ++ AKPE K I+EFE+KL HT D +
Sbjct: 1246 NFDCFGDKLSDESIFSAFLSVVGKLRRGAKPEGKAIIDEFEQKLRACHTRGLD---GIKE 1302
Query: 1226 AQIHQQKVNTMGNSVADRNAGEESAESDISEDDESIGPSAKRTNQYINNISK-------- 1277
+I Q ++ + + D++ + P +RT + N +
Sbjct: 1303 LEIGQAGSQRAPSAKKPSTGSRYQPLASTASDNDFVTPEPRRTTRRHPNTQQRASKKKPK 1362
Query: 1278 ---SQSDGSEEHSGASSEVTETET 1298
S + SEE S+E+TE ET
Sbjct: 1363 VVFSSDESSEE--DLSAEMTEDET 1384
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 214/412 (51%), Gaps = 22/412 (5%)
Query: 68 FDRVYSLIRNFSSLSPSCK---LSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPVLDRL 124
FD +YS++ +F S+ P K L + + S S LP + + +S S N
Sbjct: 60 FDTIYSILHHFRSIDPGLKEDTLQFLIKVVSRHSQELPAILDDTTLSGSDRN-------- 111
Query: 125 SSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQP----VNSWNWDPQRGRIL 180
+H NA K+ + LI ++ + E S N + + K+ + ++W+ +R IL
Sbjct: 112 -AHLNALKMNCYALIRLLESFETMASQTNLVDLDLGGKGKKARTKAAHGFDWEEERQPIL 170
Query: 181 NLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATL--LKDADTKDALCRIIGAC 238
L+ L++++ L+ S +E ++S V + + EN T+ K+ T++A+ ++G
Sbjct: 171 QLLTQLLQLDIRHLWNHSIIEEEFVSLVTGCCYRLLENPTINHQKNRPTREAITHLLGVA 230
Query: 239 ATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAY 298
T+Y+++ + I+ ++ ++ + + AV+ Y S+ ++REIG+ P+
Sbjct: 231 LTRYNHMLSATVKIIQMLQHFEHLAPVLVAAVSLWATDYGMKSIVGEIVREIGQKCPQEL 290
Query: 299 VKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFK 358
+D G + FL ELA+R+P ++ +++ +L+ H GE+Y +RNA++ + ++V +
Sbjct: 291 SRDPSGTKGFAAFLTELAERVPAILMSSMCILLDHLDGENYMMRNAVLAAMAEMVLQVLS 350
Query: 359 DIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVA 418
+ EA+++ T+ L+ L DV+++ RSRVLQ++ + ++ ++ + + V
Sbjct: 351 GDQLEAAARD----TRDQFLDTLQAHGHDVNSFVRSRVLQLFTRIVQQKALPLTRFQAVV 406
Query: 419 EVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQLRIASFEATLDEYRKKLN 470
+A GRL DKS +V K+A+ LL L +NPF +L A L + +KL
Sbjct: 407 ALAVGRLADKSVLVCKNAIQLLASFLANNPFSCKLSDADLAGPLQKETQKLQ 458
>sp|Q06156|CND1_YEAST Condensin complex subunit 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YCS4 PE=1 SV=1
Length = 1176
Score = 314 bits (805), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 269/1048 (25%), Positives = 501/1048 (47%), Gaps = 101/1048 (9%)
Query: 175 QRGRILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRI 234
Q +L I LEINL +F ++ + ++ R F++ E + K + K + RI
Sbjct: 163 QMENLLESITKLLEINLSKIFQTTPEKDLFIGLFTRPLFVLLEIEPVTKVSSLKMFIQRI 222
Query: 235 IGACATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTN 294
+ C + +S+M + + + V A+ + +Y L +++EI
Sbjct: 223 LAMCVKNHGQSSSIQSSLMTNLTYFLHLSVFNAELLKLLNDEYNYPQLTEDILKEISTRV 282
Query: 295 PKAYVKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVA 354
A KDT G + I FL++L++ P ++ + ++I S +R ++V G +VA
Sbjct: 283 FNA--KDTTGPKAISNFLIKLSELSPGIMLRQMNLVITLLNNSSITLRCSVVEACGNIVA 340
Query: 355 KAFKDIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLW 414
+ +D + K + ++E+L ER +D + Y R++ +Q +++C+ S
Sbjct: 341 ELAQDPQTMEHYK----QQIAVLIELLEERFQDSNPYVRTKAIQGCSKICDLSSKFNKSK 396
Query: 415 NEVAEVAAGRLEDKSAIVRKSALNLLVMMLQHNPF----GPQLRIASFEATLDEYRKKLN 470
+ +A L+D+S++VR++++ LL +L +PF G QLR++ +E L +LN
Sbjct: 397 AKFTSLAVRSLQDRSSLVRRNSVKLLSKLLLKHPFKAIHGSQLRLSEWEEYLKGSESQLN 456
Query: 471 GLEPDIHSES----------ITDGLPSDRGTC--------NGDGEVDDLNAEVVVQEQQE 512
+ S+ I + + D G C N E+ + EV
Sbjct: 457 STLKKVESQETLNDTIERSLIEEEVEQDEGQCRTELEGSFNKSAELSRIENEV------- 509
Query: 513 SLTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMAS 572
E I ++SV L + + ++ + + F K + ++ + L+ S
Sbjct: 510 -----------ENINATNTSV-----LMKLKLMIVYYKDAISFIKEIHKSIELISNLLFS 553
Query: 573 SSASDVENTILLLMRCKQFQIDGAEACLHKMLPLVLSQDKS---------IYEAVENAFI 623
+ ++V ++ L+ F I+ +E + KML LV + + + E + F+
Sbjct: 554 KNRNEVLESMDFLVLADAFDIELSEFGIKKMLHLVWMKGTNDEGTSISVHLIECYKQLFL 613
Query: 624 T----IYVRKSPVETAKNLLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFC 679
T +++ AKNL+NL+I ++I D A++E ++G + + + I+ LW +
Sbjct: 614 TAPDSCNMQEKAAHIAKNLINLSIGASIADLASLEQLLGMMYEQKLIDQHVINILWAIYN 673
Query: 680 F----------NVS------GTTPEKSRAALSVLCMAAKSSAAVLGSHLQDIIDIGFGRW 723
NV+ G + E+ ++ +L M + + + L+ +++IG G
Sbjct: 674 SASKASMQKEQNVNNRDSEKGFSKEQIHGSIIILGMLSLADNEIALKGLESLLNIGLGAV 733
Query: 724 AKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRV----FATLESLITGFWLPDNIWYTAA 779
+ L R +C+A++R+ + + + + L ++I + DN +Y
Sbjct: 734 GLKDLTLCRYSCLALERMVPKRSTIITKAINQELEDVAVKKLYAIIIN-YTKDNEYYPMC 792
Query: 780 DKAISAIYTIHPTPETLAVDLVKKSLSAVFDYVGGEEPHNGIDCVGTSMPTSVQVSKLGR 839
++A+SA++TI P+ LA DL+++ F G E + I S+ S +V L +
Sbjct: 793 EQALSALFTISSKPDILATDLIREKTMMTF---GKPEEEDSI----LSLEQSSRVVSLSQ 845
Query: 840 YLFILSHIAMNQLVYIESCVCEIRKQKIKKEKMIADDQNIHSN-NNTNGDLPKDTSINAE 898
LFI+ +A+ LVY+E C E +K+KI+ E +N ++ NT D D + E
Sbjct: 846 LLFIVGQVAIKTLVYLEKCEAEFKKRKIEAETRNGKVKNQGADVTNTTQDNGGDKEL--E 903
Query: 899 LGLAASEDAKLDTLSEKAEKEIISGGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASA 958
+ +ED D + E E++ G +K+++G + + N S + P LQ +A
Sbjct: 904 MIGGTNEDDFTDAIQFVKENELLFG---EKSILGKFCPIVEEIVSNSSRFSD-PMLQRTA 959
Query: 959 MLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENM 1018
L L + M + + YC+ +L LL TV+E SP +RSN + LGD+AV F NL++ T+ +
Sbjct: 960 TLCLEKLMCLSSKYCEKSLPLLITVMEKSPDPTIRSNAVLGLGDMAVCFNNLVDENTDYL 1019
Query: 1019 YARLKDPSMAVRKNAVLVLSHLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELS 1078
Y RL D ++ V++ ++ ++ LIL +KVKG + EMA +++ DQ IS++ +LFF EL+
Sbjct: 1020 YRRLHDENLMVQRTCLMTVTFLILAGQVKVKGQLGEMAKCLDNPDQGISDMCRLFFTELA 1079
Query: 1079 KKGNNPIYNLLPDILGKLCNQN-LKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGV 1137
K +N IYN DI L + + L ESF I++ L+ FI K++ + L EKL R
Sbjct: 1080 SK-DNAIYNGFIDIFSNLSSDDLLGKESFKKIIKFLLTFIDKERHQKQLNEKLVGRLRKC 1138
Query: 1138 TDIRQWEYISYCLSQLAFTEKGMKKLIE 1165
+QW+ I++ L+ L + + + L+E
Sbjct: 1139 ETQKQWDDIAFVLNNLPYKNEDVTALLE 1166
>sp|O94679|CND1_SCHPO Condensin complex subunit 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=cnd1 PE=1 SV=1
Length = 1158
Score = 308 bits (790), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 291/1147 (25%), Positives = 540/1147 (47%), Gaps = 86/1147 (7%)
Query: 61 CIEEQDLFDRVYSLIRNFSSLSPSCKLSLVESLRSNLSVLLPNVDSLSRVSQSQDNETPV 120
C +E D ++++++ +F+ LS S + + + L SN+S ++ + +S + + T
Sbjct: 51 CFDE-DCLEKLFAICSHFADLSSSVRNKVYDLLTSNISSESAILEDM--ISANATDFTVP 107
Query: 121 LDRLSSHRNAFKIYTFFLISIVLAQEFNISSNNNPKVTASTRKKQPVNSWNWD--PQRGR 178
L + AF++ L S S+N T RKK P + NW+
Sbjct: 108 QTNLETTGIAFQLTVNSLSSSNQLSVIRSSTN-----TVKGRKKNPTTNSNWNGISHVNA 162
Query: 179 ILNLIANSLEINLPLLFGSSDPDENYLSFVVRNAFLMFENATLLKDADTKDALCRIIGAC 238
+L+ I + L ++ +S + +LS ++ + + E+ +K+A + L IIG
Sbjct: 163 LLDAIITLFQKKLSRVWTTSSERDMFLSLFLKPIYTLMESEINIKNASFRSRLFNIIGLA 222
Query: 239 ATKYHYIEQSCASIMHLIHKYDFVVVHMADAVAGAEKKYADGSLATYLIREIGRTNPKAY 298
+++ + +I+ + ++ + + AD V ++ +LA +IR +
Sbjct: 223 VQFHNHTTAAETNIIQNLQYFEHLSEYAADLVHIVTVQFNSVTLAEGIIRTLCSLEFND- 281
Query: 299 VKDTVGAENIGRFLVELADRLPKLISTNIGVLILHFGGESYKIRNALVGVLGKLVAKAFK 358
D G + + FLV L+ +P L + L+ ESY +R A++ VL +V
Sbjct: 282 -NDVKGPKQVALFLVRLSSLIPNLCLKQLTQLVKLLDSESYTLRCAIIEVLANVVIDQIH 340
Query: 359 DIEGEASSKSVRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVA 418
D S+SV T Q+++++L ER D+S Y R++VL V+ ++ + E+A
Sbjct: 341 DEAQNEMSESVP-ATVQSLMDLLSERLLDISPYCRTKVLHVFIKIFDLPIKYPRKRQEIA 399
Query: 419 EVAAGRLEDKSAIVRKSALNLLVMMLQHNPFGPQ----LRIASFEATLDEYRKKLNGLEP 474
E+ L+D+S+ VR++A+ L +L +PF L +E L ++LN L+P
Sbjct: 400 ELVIRCLQDRSSHVRRNAIKLFSKLLTTHPFSVMHNGLLTRNIWEKGLSIIEEQLNSLQP 459
Query: 475 DIHSESITDGLPSDRGTCNGDGEVDD--LNAEVVVQEQQESLTDSCLPLADEGIADKDSS 532
E + D + EVD+ L ++Q+ + +S L + +++ S
Sbjct: 460 K-QQEKVVDS----------ELEVDENLLEDATMIQDDESHEGESHL---ENSLSEYVDS 505
Query: 533 VP--DVGNLEQTRALVASLEAGLRFSKCVSSTMPTLVQLMASSSASDVENTILLLMRCKQ 590
VP ++ + T+ LEA L++ V + + QL+ + + S+V ++ + C
Sbjct: 506 VPAEEIVKVNLTKRFY--LEA-LQYIDIVEAGAKIISQLLFAKNKSEVIESMDFFVFCNS 562
Query: 591 FQIDGAEACLHKMLPLVLSQDKS-----IYEAVENAFITIYVRKSPVE--------TAKN 637
F I ++ + KM+ L+ + S I V + + T++ P A+N
Sbjct: 563 FGISSSKLYIKKMIHLIWVKGTSDEGNNIQNHVLSCYKTLFFEPPPNSGTNEAANYIARN 622
Query: 638 LLNLAIDSNIGDQAAMEFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKSRAALSVL 697
L++L D+++ + ++E ++ L+ G S I+ LW + + + + R ++ V+
Sbjct: 623 LISLTYDASLAELTSLEQMLCILMKDGYFSHLVITKLWQVYSYQKKDISRTQRRGSIIVI 682
Query: 698 CMAAKSSAAVLGSHLQDIIDIGFGRWAKVEPLLARTACIAIQRLSQEDKKKLLLSYGSRV 757
M A + V+ L +I IG G + +LAR CIAI+R+ ++ +++ +
Sbjct: 683 GMLALGNTDVVMQGLDHLIQIGLGPPGLEDLVLARYTCIAIKRIGKDASGSSNINFPNS- 741
Query: 758 FATLESLITGFWLPDNI---WYTAADKAISAIYTIHPTPETLAVDLVKKSLSAVF----- 809
TL + L + W+ ++AI AIY + P+ L +++ +F
Sbjct: 742 -HTLCQKLCMLLLRPSFSEEWFGLEEQAIEAIYAVAKHPDELCTNIILLLTKQLFKPSNH 800
Query: 810 -------DYVGGEEPHNGIDCVGTSMPTSVQVSKLGRYLFILSHIAMNQLVYIESCVCEI 862
D+ E+ + + + + +L +F++ H+A+ QLVYIE C E
Sbjct: 801 ENTTSNDDHAMDEDLDDSPEEETLKDEEEIGI-RLAHLIFLVGHVAIKQLVYIEYCEAEF 859
Query: 863 RKQKIKKEKMIADDQNIHSNNNTNGDLPKDTSINAELGLAASEDAKLDTLSEKAEKEIIS 922
+++K E++ QN SNN NG ++TS +L SED + ++ E+E++
Sbjct: 860 KRRKADAERLAV--QN--SNNPING---QETS-EYDLITGTSEDDFSEAMTFIRERELLY 911
Query: 923 GGSSQKNLIGHCASFLSKFCRNFSLMNKYPELQASAMLALCRFMIIDADYCDANLQLLFT 982
G +S L+ A + + C N N L +A L L +FM + ++C +L LL T
Sbjct: 912 GENS---LLSRFAPLVVELCSNHKSHNN-QSLLLAASLTLSKFMCLSNNFCMEHLPLLIT 967
Query: 983 VVESSPSEIVRSNCTIALGDLAVRFPNLLEPWTENMYARLKDPSMAVRKNAVLVLSHLIL 1042
++E + I+R+N I L DL V F + ++ +E +Y RL D +V+K + L+ LIL
Sbjct: 968 ILEKCDNPIIRNNLVIGLADLTVCFNHFIDEISEYLYRRLMDEESSVKKTCFMTLAFLIL 1027
Query: 1043 NDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILGKLCN---- 1098
+KVKG + MA +EDED RIS+LA++FF + + K +N +YN DI L
Sbjct: 1028 AGQIKVKGQLGIMARSLEDEDARISDLARMFFTDFAAK-DNSVYNNFIDIFSVLSRSAEE 1086
Query: 1099 QNLKTESFCNIMQLLIGFIKKDKQMEALVEKLCNRFSGVTDIRQWEYISYCLSQLAFTEK 1158
Q+ F I++ L FI+K++ + L E+L R RQW+++ Y LS L
Sbjct: 1087 QDEDDAKFKRIIRFLTSFIEKERHTKQLAERLAARLDRCKTQRQWDHVVYALSLLPHKAD 1146
Query: 1159 GMKKLIE 1165
++KLI+
Sbjct: 1147 NIQKLID 1153
>sp|Q6ZQK0|CNDD3_MOUSE Condensin-2 complex subunit D3 OS=Mus musculus GN=Ncapd3 PE=1 SV=3
Length = 1506
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%)
Query: 954 LQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEP 1013
++A A++ L + + D ++ L +E S VR+N I + DL +R+ +++
Sbjct: 914 IRAHAIITLGKLCLQHEDLAKKSIPALVRELEVSEDVAVRNNVIIVICDLCIRYTVMVDN 973
Query: 1014 WTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKG 1050
+ N+ LKD +RK +++L++L+ + +K KG
Sbjct: 974 YIPNISVCLKDSDPFIRKQTLVLLTNLLQEEYVKWKG 1010
>sp|P42695|CNDD3_HUMAN Condensin-2 complex subunit D3 OS=Homo sapiens GN=NCAPD3 PE=1 SV=2
Length = 1498
Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%)
Query: 954 LQASAMLALCRFMIIDADYCDANLQLLFTVVESSPSEIVRSNCTIALGDLAVRFPNLLEP 1013
++A A++ L + + D ++ L +E VR+N I + DL +R+ +++
Sbjct: 919 IRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNNVIIVMCDLCIRYTIMVDK 978
Query: 1014 WTENMYARLKDPSMAVRKNAVLVLSHLILNDMMKVKG 1050
+ N+ LKD +RK +++L++L+ + +K KG
Sbjct: 979 YIPNISMCLKDSDPFIRKQTLILLTNLLQEEFVKWKG 1015
>sp|Q979R3|TRM56_THEVO tRNA (cytidine(56)-2'-O)-methyltransferase OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=TV1097 PE=3 SV=1
Length = 338
Score = 35.8 bits (81), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 246 EQSCASIMHLIHKYDFVVVHMAD----AVAGAEKKYADGSLATY--LIREIGRTNPKAYV 299
EQ C +++ D+++ H+ AVA A+K AD +L T L+ +IGRT +
Sbjct: 172 EQGCLDLLYKYGASDYLINHVKSVKELAVAIAKKTNADINLVTAGALLHDIGRTQVQGIT 231
Query: 300 KDTVGAENIGRFLVELADRLPKLISTNIGVLI 331
VGA+ + R ++ DR+ ++ +IG I
Sbjct: 232 HAVVGADILRREGID--DRVVSIVEKHIGAGI 261
>sp|B3S0D3|PURA_TRIAD Adenylosuccinate synthetase OS=Trichoplax adhaerens
GN=TRIADDRAFT_26635 PE=3 SV=1
Length = 442
Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 988 PSEIVRSNCTIALGD-LAVRFPNLLEPWTENMYARLKDPSMAVRKNAV------LVLS-- 1038
PS I++SNCT +G+ + + P L +A ++ A+ KN V L +S
Sbjct: 74 PSGIIQSNCTSVIGNGVVIHLPGL--------FAEIE----AIEKNGVQDCWSKLKISDR 121
Query: 1039 -HLILNDMMKVKGYINEMAIRVEDEDQRISNLAKLFFHELSKKGNNPIYNLLPDILG-KL 1096
HL+ + + G + +E D +I +KKG P Y+ +G ++
Sbjct: 122 AHLVFDFHQEADGL-----LELEKGDSKIGT---------TKKGIGPAYSTKASRVGLRV 167
Query: 1097 CNQNLKTESFCNIMQLLI-GFIKKDKQMEALVEKLCNRFSGVTDI 1140
C+ E F + L+ G+ K+ ++E VEK R+ DI
Sbjct: 168 CDLMGDFEDFTKKFKNLVKGYRKRFSELEVDVEKELERYKRYADI 212
>sp|Q28C74|LPPRC_XENTR Leucine-rich PPR motif-containing protein, mitochondrial OS=Xenopus
tropicalis GN=lrpprc PE=2 SV=1
Length = 1391
Score = 35.0 bits (79), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 583 LLLMRCKQFQIDGAEACLHKMLPLVLSQDKSIYEAVENAFITIYVRKSPVETAKNLLNLA 642
L+ C + I+GA K+L + ++D I EAV N +T + R +E AKN+ L+
Sbjct: 187 LIAAYCNEGDIEGAS----KILGFMKNKDLPITEAVFNTLVTGHARAGDMENAKNI--LS 240
Query: 643 IDSNIGDQAAMEFIVGTLVS---KGDVS 667
+ + G + E V L + KGD++
Sbjct: 241 VMRSAGIEPGPETYVALLTAYAEKGDIN 268
>sp|O84337|UVRA_CHLTR UvrABC system protein A OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=uvrA PE=3 SV=1
Length = 1786
Score = 34.3 bits (77), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 449 FGPQLRIASFEATLDEYRKKLNGLEPDIH-SESITDGLPSDRGTCNGDGEVDDLNAEVVV 507
F Q R+ S +ATL E ++ L PD+ S S D P C G G ++ ++
Sbjct: 231 FDNQKRVFSTQATLPETQQTYAPLSPDLFSSHSHKDRCPQ----CQGSGIFISIDDPCII 286
Query: 508 QEQQESLTDSCLPLA 522
Q Q S+ D+C P A
Sbjct: 287 Q-QTLSIEDNCCPFA 300
>sp|Q8CR47|XYLB_STAES D-xylulose kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=xylB PE=3 SV=1
Length = 496
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 27/188 (14%)
Query: 633 ETAKNLLNLAIDSNIGDQAAM--EFIVGTLVSKGDVSMSTISALWDFFCFNVSGTTPEKS 690
E+ + +LNLA S IG + ++ G GD + F + T + +
Sbjct: 313 ESFEEILNLAASSKIGANGLLFTPYLAGERTPHGDAQIRG-----SFIGISGQHTKADFA 367
Query: 691 RAALSVLCMAAKSSAAVL---GSHLQDIIDIGFGR----WAKVEPLLARTACIAIQRLSQ 743
RA + + + S ++ G + I IG G W +++ A + I+RL
Sbjct: 368 RAVIEGITYSLYDSIKIMRRAGHEMNSITSIGGGAKSRFWLQLQ---ADIFNVQIKRLKH 424
Query: 744 EDKKKL----LLSYGSRVFATLESLITGF------WLPDNIWYTAADKAISAIYTIHPTP 793
E+ + L +YG F T+ES + F + P+N + ++ S I+
Sbjct: 425 EEGPSMGAAILAAYGLGWFKTIESCVEAFIKVDEVFEPNNENHDLYEQYYSVYEAIYKQT 484
Query: 794 ETLAVDLV 801
+ L DL+
Sbjct: 485 KQLTADLL 492
>sp|Q4AAQ6|EFG_MYCHJ Elongation factor G OS=Mycoplasma hyopneumoniae (strain J / ATCC
25934 / NCTC 10110) GN=fusA PE=3 SV=2
Length = 694
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 456 ASFEATLDEYRKKLNG----LEPDIHSESITDGLPS--DRGTCNGDGEVDDLNAEVVVQE 509
A+FEA+++ R KLNG ++ +I +E+ GL + N DG+ +++ E+ + E
Sbjct: 142 ANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEEIEYEIPIPE 201
Query: 510 QQ-ESLTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTL 566
E + L LA E +AD D + + LE+ L L+A +R + + P +
Sbjct: 202 DLFEKASQMRLALA-EAVADYDEEIFN-NLLEEKEILPEQLKAAIRAATITGNFFPVV 257
>sp|Q4A8T7|EFG_MYCH7 Elongation factor G OS=Mycoplasma hyopneumoniae (strain 7448)
GN=fusA PE=3 SV=2
Length = 694
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 456 ASFEATLDEYRKKLNG----LEPDIHSESITDGLPS--DRGTCNGDGEVDDLNAEVVVQE 509
A+FEA+++ R KLNG ++ +I +E+ GL + N DG+ +++ E+ + E
Sbjct: 142 ANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEEIEYEIPIPE 201
Query: 510 QQ-ESLTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTL 566
E + L LA E +AD D + + LE+ L L+A +R + + P +
Sbjct: 202 DLFEKASQMRLALA-EAVADYDEEIFN-NLLEEKEILPEQLKAAIRAATITGNFFPVV 257
>sp|Q601W8|EFG_MYCH2 Elongation factor G OS=Mycoplasma hyopneumoniae (strain 232)
GN=fusA PE=3 SV=1
Length = 694
Score = 33.9 bits (76), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Query: 456 ASFEATLDEYRKKLNG----LEPDIHSESITDGLPS--DRGTCNGDGEVDDLNAEVVVQE 509
A+FEA+++ R KLNG ++ +I +E+ GL + N DG+ +++ E+ + E
Sbjct: 142 ANFEASIESVRTKLNGNAVAIQLNIGAEADFSGLIDLVEMKAYNYDGQKEEIEYEIPIPE 201
Query: 510 QQ-ESLTDSCLPLADEGIADKDSSVPDVGNLEQTRALVASLEAGLRFSKCVSSTMPTL 566
E + L LA E +AD D + + LE+ L L+A +R + + P +
Sbjct: 202 DLFEKASQMRLALA-EAVADYDEEIFN-NLLEEKEILPEQLKAAIRAATITGNFFPVV 257
>sp|Q5P7B4|SYH_AROAE Histidine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1)
GN=hisS PE=3 SV=1
Length = 438
Score = 33.9 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 4 NFVFPQNLQALEEQEDEEHDGNRLYAQNPISITSMHPSELVEFVKGVSFDLSDKELFCIE 63
N + P +A E ED D R Y PI + + P+ L + G D+ +KE++ E
Sbjct: 18 NDILPDEAEAWEHFEDIVRDWLRSYGYRPIRMPIVEPTPLFKRAIGEVTDIVEKEMYSFE 77
Query: 64 E 64
+
Sbjct: 78 D 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 456,549,790
Number of Sequences: 539616
Number of extensions: 18628282
Number of successful extensions: 61791
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 61456
Number of HSP's gapped (non-prelim): 436
length of query: 1342
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1212
effective length of database: 121,419,379
effective search space: 147160287348
effective search space used: 147160287348
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)