Query 000707
Match_columns 1341
No_of_seqs 435 out of 2937
Neff 7.3
Searched_HMMs 29240
Date Tue Mar 26 22:55:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/000707.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_13-17//hhsearch_pdb/000707hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 1.0 1 1 528.5 71.5 567 24-882 18-610 (611)
2 2ymu_A WD-40 repeat protein; u 1.0 1 1 512.1 81.2 561 16-880 10-577 (577)
3 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 502.9 68.1 621 16-882 609-1248(1249)
4 2ymu_A WD-40 repeat protein; u 1.0 1 1 482.6 76.6 550 55-915 7-562 (577)
5 3sfz_A APAF-1, apoptotic pepti 1.0 1 1 474.0 62.6 561 57-914 608-1230(1249)
6 1pgu_A Actin interacting prote 1.0 1 1 464.1 69.7 555 22-883 16-614 (615)
7 1nr0_A Actin interacting prote 1.0 1 1 457.9 70.5 554 77-914 20-593 (611)
8 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 432.1 57.8 609 23-836 16-788 (902)
9 2oaj_A Protein SNI1; WD40 repe 1.0 1 1 422.9 60.6 654 60-888 13-788 (902)
10 1pgu_A Actin interacting prote 1.0 1 1 415.4 63.1 537 77-914 20-596 (615)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=528.47 Aligned_cols=567 Identities=15% Similarity=0.157 Sum_probs=436.3
Q ss_pred CCCCCCEEECCCC-EEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 9997724717999-399971993999968996425762599899989777789969999980389865657789999986
Q 000707 24 RNNFGSADLSPSG-LLAFASGSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHL 102 (1341)
Q Consensus 24 ~~~~~~~~~s~~g-llA~g~~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~s~~~~~~g~ 102 (1341)
+....+++|+|+| ++|+++++.|.+||+.+++...+|.+|.. .|++++|+|+ |.
T Consensus 18 ~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~-----------~v~~~~~spd--------------g~ 72 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSH-----------QTTVAKTSPS--------------GY 72 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSS-----------CEEEEEECTT--------------SS
T ss_pred CCCEEEEEECCCCCEEEECCCCEEEEECCCCCCCCEEECCCCC-----------CEEEEEECCC--------------CC
T ss_conf 6823697667999979967999799945787242737658998-----------6599999999--------------96
Q ss_pred EEEEEECCCCEEEEECCCCE--EEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECC----CEEEEEECCCCEEEEEEE
Q ss_conf 99999499969999489993--999964899999986699985549996099999389----819999889991889970
Q 000707 103 LLAAADRHGRVALLDFRLRS--VVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGP----SVLSLYNTTSASCMWKYD 176 (1341)
Q Consensus 103 ~LASg~~dG~V~IWDv~tg~--~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~~d----~~I~lWd~~tG~~i~~~~ 176 (1341)
+||||+.||+|+|||+.+++ .... +.+|.+ +|.+++|+|++ .+|++++.+ +.|.+||. |+.+..+.
T Consensus 73 ~lasg~~d~~v~lWd~~~~~~~~~~~--~~~~~~-~v~~v~fs~dg---~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~ 144 (611)
T 1nr0_A 73 YCASGDVHGNVRIWDTTQTTHILKTT--IPVFSG-PVKDISWDSES---KRIAAVGEGRERFGHVFLFDT--GTSNGNLT 144 (611)
T ss_dssp EEEEEETTSEEEEEESSSTTCCEEEE--EECSSS-CEEEEEECTTS---CEEEEEECCSSCSEEEEETTT--CCBCBCCC
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEE--ECCCCC-CEEEEEECCCC---CEEEEEECCCCCEEEEEEEEC--CCCCCEEC
T ss_conf 89999489978994898984156676--225578-44899989999---979999899773669999638--99763254
Q ss_pred CCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
Q ss_conf 89975599997689998899980797299999239855430353489843851013455441036577899877675336
Q 000707 177 ASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYM 256 (1341)
Q Consensus 177 ~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~ 256 (1341)
+|...+.+++|+|....++++++.|+.+++||..+. +... .+ ..|...+
T Consensus 145 gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~-------~~~~---------~l---------------~~H~~~V 193 (611)
T 1nr0_A 145 GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF-------KFKS---------TF---------------GEHTKFV 193 (611)
T ss_dssp CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB-------EEEE---------EE---------------CCCSSCE
T ss_pred CCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCC-------EEEE---------EE---------------CCCCCCE
T ss_conf 788983699988999829999928980999979997-------5766---------52---------------0025716
Q ss_pred EEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECC-----CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 99999169872299972984999985898046999439-----9754629999849999799996699299996658943
Q 000707 257 VKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALP-----RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQ 331 (1341)
Q Consensus 257 ~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l~-----~~~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~ 331 (1341)
.+++|+||++.+++++.|++|++||+.+++.+..+... .+...+..+.++||++.|++++.|++|++|+..++.+
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCE
T ss_conf 99999799998999989991999889998286651366432356678789999979999999990898099996888701
Q ss_pred EEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 56663021122456766789862899970582011222100268999999865668987422342356653899997388
Q 000707 332 VHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDG 411 (1341)
Q Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG 411 (1341)
...+..... ... ......+ ++..+++++.||
T Consensus 274 ~~~~~~~~~--------~~~-~~~~~~~----------------------------------------~~~~l~s~s~d~ 304 (611)
T 1nr0_A 274 EKTIPVGTR--------IED-QQLGIIW----------------------------------------TKQALVSISANG 304 (611)
T ss_dssp EEEEECCSS--------GGG-CEEEEEE----------------------------------------CSSCEEEEETTC
T ss_pred EEEECCCCC--------CCC-EEEEEEE----------------------------------------CCCEEEEEECCC
T ss_conf 344047887--------664-0689997----------------------------------------388799995899
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 09999822454354544434447776422212459654457676651000134212234688899999877765542259
Q 000707 412 KVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKV 491 (1341)
Q Consensus 412 ~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 491 (1341)
.|++|+...+.. .
T Consensus 305 ~i~~~~~~~~~~--------------------------~----------------------------------------- 317 (611)
T 1nr0_A 305 FINFVNPELGSI--------------------------D----------------------------------------- 317 (611)
T ss_dssp CEEEEETTTTEE--------------------------E-----------------------------------------
T ss_pred CEEEEECCCCCC--------------------------C-----------------------------------------
T ss_conf 689996889974--------------------------4-----------------------------------------
Q ss_pred EEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEE-EECCCCEEEEEECCC
Q ss_conf 8843022367662999963997210012699877899989999918992999968999088997-431787579997399
Q 000707 492 SLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASF-SVHNGTVRGLRWLGN 570 (1341)
Q Consensus 492 ~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg~~~~~l-~~H~~~V~~i~~s~~ 570 (1341)
..+.+|...|++++++| ++.+|++|+.||+|++||+.++.+...+ .+|...|.+++|+++
T Consensus 318 ---~~~~gh~~~v~~l~~sp----------------dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 318 ---QVRYGHNKAITALSSSA----------------DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp ---EEECCCSSCEEEEEECT----------------TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred ---EEECCCCCCEEEEEEEC----------------CCCEEEEEECCCCEEEEECCCCCEEEECCCCCCCEEEEEEECCC
T ss_conf ---69837888889999918----------------99989999589849999788792563216677650789998789
Q ss_pred CCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEE----EEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 8389984387643467401859999855893003----699016999996999987999989999999969999664787
Q 000707 571 SRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRA----FRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNP 646 (1341)
Q Consensus 571 ~~liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~----l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~ 646 (1341)
+.+++.+.+ +.+++|++.++.... ... ....+.+++|+|+|++++++ .++.+++|+. ..
T Consensus 379 ~~l~s~s~d----------~~v~~w~~~~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~~~~~-~~~~v~~~~~-~~- 441 (611)
T 1nr0_A 379 GDLFTVSWD----------DHLKVVPAGGSGVDSSKAVANK----LSSQPLGLAVSADGDIAVAA-CYKHIAIYSH-GK- 441 (611)
T ss_dssp SCEEEEETT----------TEEEEECSSSSSSCTTSCCEEE----CSSCEEEEEECTTSSCEEEE-ESSEEEEEET-TE-
T ss_pred CCEEEEECC----------CCEEEEECCCCCCCCCCEEEEE----CCCCCCEEEEECCCCEEEEE-ECCEEEEEEC-CC-
T ss_conf 969999848----------9668954688543565212001----48997079980799699999-6763999848-94-
Q ss_pred CEEEEC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 113412--676479998599999999999996666655778775677866663237899867787886689998499996
Q 000707 647 IMLRSL--ALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFAL 724 (1341)
Q Consensus 647 ~~l~~l--~~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~ 724 (1341)
+..+ ...+.+++|+|+ +..+++++
T Consensus 442 --~~~~~~~~~v~~va~spd----------------------------------------------------g~~lasgs 467 (611)
T 1nr0_A 442 --LTEVPISYNSSCVALSND----------------------------------------------------KQFVAVGG 467 (611)
T ss_dssp --EEEEECSSCEEEEEECTT----------------------------------------------------SCEEEEEE
T ss_pred --EEEEECCCCCEEEEEECC----------------------------------------------------CCEEEEEC
T ss_conf --346406889549999289----------------------------------------------------98999968
Q ss_pred CCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCC-CCE-EE--ECCCCCCEE
Q ss_conf 699699999449723126678899752345663999965--599999995799499998999-952-43--025777678
Q 000707 725 ANGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTT-GHS-SQ--FSTHREGIR 798 (1341)
Q Consensus 725 ~Dg~I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iWDl~t-~~~-~~--l~gH~~~V~ 798 (1341)
.|++|++|++++..+..... .+|...|.+++| ||++|++++.|++|++||+.+ ++. .. +.+|...|.
T Consensus 468 ~D~~v~lwd~~~~~~~~~~~-------~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~ 540 (611)
T 1nr0_A 468 QDSKVHVYKLSGASVSEVKT-------IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVA 540 (611)
T ss_dssp TTSEEEEEEEETTEEEEEEE-------EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEE
T ss_pred CCCEEEEEECCCCCEEEEEC-------CCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEE
T ss_conf 99739999945992224101-------57788607999989999899994899899988577872232102640466425
Q ss_pred EEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCC-CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEE
Q ss_conf 99991699999877879999889909999889887433-33346777998479999808998899985999997899299
Q 000707 799 RIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLA-NSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSSFR 877 (1341)
Q Consensus 799 ~i~fSP~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~-~~l~~gh~~~~~V~~v~w~~~~~~~~~~~~L~sas~Dgtir 877 (1341)
+++|+|+ + ++||+++.|++|+|||+.+++... ..+ .+|. ...|.+++|+|+ +. |++++.|++||
T Consensus 541 ~v~fspd--g----~~lasgs~D~~v~lW~~~~~~~~~~~~~-~~h~-~~~v~~v~fs~d----~~---l~s~~~D~~i~ 605 (611)
T 1nr0_A 541 CVSWSPD--N----VRLATGSLDNSVIVWNMNKPSDHPIIIK-GAHA-MSSVNSVIWLNE----TT---IVSAGQDSNIK 605 (611)
T ss_dssp EEEECTT--S----SEEEEEETTSCEEEEETTCTTSCCEEET-TSST-TSCEEEEEEEET----TE---EEEEETTSCEE
T ss_pred EEEECCC--C----CEEEEEECCCCEEEEECCCCCCCCCHHH-CCCC-CCCEEEEEECCC----CE---EEEECCCCCEE
T ss_conf 8998998--9----9799997997299997887555632644-4676-567118998589----97---99952887789
Q ss_pred EEECC
Q ss_conf 99846
Q 000707 878 LIEVN 882 (1341)
Q Consensus 878 vWdi~ 882 (1341)
+|++.
T Consensus 606 lW~~~ 610 (611)
T 1nr0_A 606 FWNVP 610 (611)
T ss_dssp EEECC
T ss_pred EEECC
T ss_conf 98444
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=512.09 Aligned_cols=561 Identities=16% Similarity=0.223 Sum_probs=444.9
Q ss_pred CCCCCCCCCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 125899989997724717999-399971-993999968996425762599899989777789969999980389865657
Q 000707 16 FMLPGPPSRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLL 93 (1341)
Q Consensus 16 ~~lpg~~~~~~~~~~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~ 93 (1341)
+.|.| |.+.+.|++|||+| +||+|+ ++.|.|||. +++.+++|.+|.. .|++++|+|+
T Consensus 10 ~~L~G--H~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~-----------~V~~l~fspd------- 68 (577)
T 2ymu_A 10 NRLEA--HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----------SVWGVAFSPD------- 68 (577)
T ss_dssp EEECC--CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSS-----------CEEEEEECTT-------
T ss_pred EEECC--CCCCEEEEEECCCCCEEEEEECCCEEEEEEC-CCCEEEEEECCCC-----------CEEEEEECCC-------
T ss_conf 39878--9985799999899899999938998999979-9978999968989-----------9899999899-------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEE
Q ss_conf 78999998699999499969999489993999964899999986699985549996099999389819999889991889
Q 000707 94 STEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMW 173 (1341)
Q Consensus 94 s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i~ 173 (1341)
+.+||+++.||+|+|||. +++.+..+ .+|.. +|.+++|+|++ .+|++++.++.+.+|+... ....
T Consensus 69 -------g~~las~~~d~~i~vWd~-~~~~~~~~--~~~~~-~v~~~~~s~d~---~~l~~~~~d~~~~~~~~~~-~~~~ 133 (577)
T 2ymu_A 69 -------GQTIASASDDKTVKLWNR-NGQLLQTL--TGHSS-SVRGVAFSPDG---QTIASASDDKTVKLWNRNG-QLLQ 133 (577)
T ss_dssp -------SSEEEEEETTSCEEEEET-TSCEEEEE--CCCSS-CEEEEEECTTS---SEEEEEETTSCEEEEETTC-CEEE
T ss_pred -------CCEEEEEECCCEEEEEEC-CCCEEEEE--ECCCC-CEEEEEECCCC---CEEEEECCCCCEEECCCCC-CEEE
T ss_conf -------999999969897999989-99789999--78999-88999998999---9899980798335202355-2001
Q ss_pred EEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 97089975599997689998899980797299999239855430353489843851013455441036577899877675
Q 000707 174 KYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFP 253 (1341)
Q Consensus 174 ~~~~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~ 253 (1341)
....+...+.++.+.| +...++..+.++.+.+|+.... . .... ..+.
T Consensus 134 ~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~-~~~~---------------------------~~~~ 180 (577)
T 2ymu_A 134 TLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNGQ----L-LQTL---------------------------TGHS 180 (577)
T ss_dssp EECCCSSCEEEEEECT-TSSCEEEEETTSEEEEECTTSC----E-EEEE---------------------------ECCS
T ss_pred ECCCCCCCEEEEEEEC-CCCCCEECCCCCCEECCCCCEE----E-EEEC---------------------------CCCC
T ss_conf 1047777435554203-7763200255531000000000----0-0002---------------------------6877
Q ss_pred CCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf 33699999169872299972984999985898046999439975462999984999979999669929999665894356
Q 000707 254 LYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVH 333 (1341)
Q Consensus 254 ~~~~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l~~~~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~~~ 333 (1341)
..+..+.|+|+++.+++++.|+.|++||.. ++.+..+.. +...+..+.++||++.|++++.|++|++|+.. ++.+.
T Consensus 181 ~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~~--~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~-~~~~~ 256 (577)
T 2ymu_A 181 SSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG--HSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQ 256 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEEC--CSSCEEEEEECTTSSCEEEEETTSCEEEECTT-SCEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCEEEEEECC-CCEEEEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEECC-CCEEE
T ss_conf 635665416997789998599989999499-968999946--88988999997999999999189989999599-97999
Q ss_pred EEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf 66302112245676678986289997058201122210026899999986566898742234235665389999738809
Q 000707 334 VMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKV 413 (1341)
Q Consensus 334 ~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I 413 (1341)
.+... ...+..+.++++ +..+++++.||.|
T Consensus 257 ~~~~~------------~~~v~~v~~~~d--------------------------------------~~~l~~~~~d~~i 286 (577)
T 2ymu_A 257 TLTGH------------SSSVNGVAFRPD--------------------------------------GQTIASASDDKTV 286 (577)
T ss_dssp EECCC------------SSCEEEEEECTT--------------------------------------SSEEEEEETTSCE
T ss_pred EEECC------------CCCEEEEEECCC--------------------------------------CCEEEEEECCCEE
T ss_conf 98068------------898799999689--------------------------------------9999999599979
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99982245435454443444777642221245965445767665100013421223468889999987776554225988
Q 000707 414 WNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSL 493 (1341)
Q Consensus 414 ~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l 493 (1341)
++|+..... . .
T Consensus 287 ~~w~~~~~~---------------------------~----------------------------------------~-- 297 (577)
T 2ymu_A 287 KLWNRNGQL---------------------------L----------------------------------------Q-- 297 (577)
T ss_dssp EEEETTSCE---------------------------E----------------------------------------E--
T ss_pred EEEECCCCE---------------------------E----------------------------------------E--
T ss_conf 999489958---------------------------9----------------------------------------9--
Q ss_pred EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCE
Q ss_conf 43022367662999963997210012699877899989999918992999968999088997431787579997399838
Q 000707 494 DGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRL 573 (1341)
Q Consensus 494 ~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg~~~~~l~~H~~~V~~i~~s~~~~l 573 (1341)
.+.+|..+|++++++| ++.++++++.||+|++||+.. .....+.+|...|.+++|++++..
T Consensus 298 --~~~~h~~~v~~~~~~~----------------~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~ 358 (577)
T 2ymu_A 298 --TLTGHSSSVWGVAFSP----------------DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQT 358 (577)
T ss_dssp --EECCCSSCEEEEEECT----------------TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSE
T ss_pred --EEECCCCCEEEEEECC----------------CCCEEEEEECCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCCE
T ss_conf --9706889769999999----------------999999996999599996999-725787478897799999899999
Q ss_pred EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECC
Q ss_conf 99843876434674018599998558930036990169999969999879999899999999699996647871134126
Q 000707 574 VSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLA 653 (1341)
Q Consensus 574 iS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~~~l~~l~ 653 (1341)
+..+. .++.+++||. ++. .+..+.+ |..+|++++|+|+|++|++++.|+.|++||. ++++++.+.
T Consensus 359 l~~~~---------~dg~v~~~~~-~~~--~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~--~~~~~~~~~ 423 (577)
T 2ymu_A 359 IASAS---------DDKTVKLWNR-NGQ--LLQTLTG-HSSSVRGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLT 423 (577)
T ss_dssp EEEEE---------TTSEEEEEET-TCC--EEEEEEC-CSSCEEEEEECTTSSCEEEEETTSEEEEECT--TCCEEEEEE
T ss_pred EEEEE---------CCCEEEEECC-CCC--EEEEECC-CCCCEEEEEECCCCCEEEEEECCCEEEEEEC--CCCEEEEEC
T ss_conf 99996---------9998999908-997--8998527-8897489999899999999949998999969--997898962
Q ss_pred ---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
Q ss_conf ---76479998599999999999996666655778775677866663237899867787886689998499996699699
Q 000707 654 ---LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALG 730 (1341)
Q Consensus 654 ---~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~I~ 730 (1341)
..+++++|+|+ +..+++++.|++++
T Consensus 424 ~~~~~v~~~~~s~d----------------------------------------------------~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 424 GHSSSVWGVAFSPD----------------------------------------------------DQTIASASDDKTVK 451 (577)
T ss_dssp CCSSCEEEEEECTT----------------------------------------------------SSEEEEEETTSEEE
T ss_pred CCCCCEEEEEECCC----------------------------------------------------CCEEEEECCCCEEE
T ss_conf 88997579999899----------------------------------------------------99999993999899
Q ss_pred EEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCC
Q ss_conf 999449723126678899752345663999965--599999995799499998999952430257776789999169999
Q 000707 731 VFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGHSSQFSTHREGIRRIKFSPVVPG 808 (1341)
Q Consensus 731 vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iWDl~t~~~~~l~gH~~~V~~i~fSP~~~g 808 (1341)
+|+.++..++. +.+|...+.+++| |+++|++++.|++|++||......+.+.+|...|.+++|+|+ +
T Consensus 452 ~w~~~~~~~~~---------~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~d--g 520 (577)
T 2ymu_A 452 LWNRNGQLLQT---------LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--G 520 (577)
T ss_dssp EEETTSCEEEE---------EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT--S
T ss_pred EEECCCCEEEE---------ECCCCCCEEEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECCCCCEEEEEECCC--C
T ss_conf 99799988999---------727899778999969999999991989799993999789998679999899999189--9
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 987787999988990999988988743333346777998479999808998899985999997899299998
Q 000707 809 DRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSSFRLIE 880 (1341)
Q Consensus 809 d~~~~~Las~s~DgtI~IWDl~~~~~l~~~l~~gh~~~~~V~~v~w~~~~~~~~~~~~L~sas~DgtirvWd 880 (1341)
++||+++.|++|+|||.. ++++ .++ .+|. ..|++++|+|+ ++ +|++++.|++|++||
T Consensus 521 ----~~l~s~~~dg~v~lwd~~-~~~~-~~~-~~h~--~~v~~~~fs~d----g~--~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 521 ----QTIASASDDKTVKLWNRN-GQLL-QTL-TGHS--SSVWGVAFSPD----GQ--TIASASSDKTVKLWN 577 (577)
T ss_dssp ----SCEEEEETTSEEEEECTT-SCEE-EEE-ECCS--SCEEEEEECTT----SS--CEEEEETTSCEEEEC
T ss_pred ----CEEEEEECCCEEEEEECC-CCEE-EEE-CCCC--CCEEEEEECCC----CC--EEEEEECCCEEEEEC
T ss_conf ----999999896999999699-9789-897-1888--88789999689----99--999990899999969
No 3
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=502.92 Aligned_cols=621 Identities=16% Similarity=0.198 Sum_probs=460.4
Q ss_pred CCCCCCCCCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 125899989997724717999-399971-993999968996425762599899989777789969999980389865657
Q 000707 16 FMLPGPPSRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLL 93 (1341)
Q Consensus 16 ~~lpg~~~~~~~~~~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~ 93 (1341)
.+++| |...+.+++|+|+| ++|.|+ ++.|.|||..+++.+.++.+|.. .|++++|+|+
T Consensus 609 ~~~~~--h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~-----------~v~~~~~s~~------- 668 (1249)
T 3sfz_A 609 LVVRP--HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED-----------EVLCCAFSSD------- 668 (1249)
T ss_dssp EEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-----------CEEEEEECTT-------
T ss_pred EEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCC-----------CEEEEEEECC-------
T ss_conf 78716--666489999879999899994889499999899978887606777-----------7899999269-------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEE
Q ss_conf 78999998699999499969999489993999964899999986699985549996099999389819999889991889
Q 000707 94 STEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMW 173 (1341)
Q Consensus 94 s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i~ 173 (1341)
+.+||+|+.||+|+|||+.+++.+..+ .+|.. +|.+++|+|+++. .++++++.|+.|.+||+.+++++.
T Consensus 669 -------~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~-~v~~~~~~~~~~~-~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 669 -------DSYIATCSADKKVKIWDSATGKLVHTY--DEHSE-QVNCCHFTNKSNH-LLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp -------SSEEEEEETTSEEEEEETTTCCEEEEE--ECCSS-CEEEEEECSSSSC-CEEEEEETTSCEEEEETTSSSEEE
T ss_pred -------CCEEEEEECCCEEEEEECCCCCEEEEE--CCCCC-CEEEEEEECCCCC-EEEEEEECCCEEEEEECCCCCHHH
T ss_conf -------998999818995999877999368999--58997-3799998408996-599998089709999899963422
Q ss_pred EEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 97089975599997689998899980797299999239855430353489843851013455441036577899877675
Q 000707 174 KYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFP 253 (1341)
Q Consensus 174 ~~~~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~ 253 (1341)
.+.+|...+.+++|+| +++.+++++.||.+.+||+..... .+.+..... ..... .+ .....
T Consensus 738 ~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~----~~~~~~~~~---~~~~~----------~~-~~~~~ 798 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANE----RKSINVKRF---FLSSE----------DP-PEDVE 798 (1249)
T ss_dssp EECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEE----EEEEECCCC---C-------------------CCC
T ss_pred EECCCCCCEEEEEEEC-CCCEEEEEECCCEEEEEECCCCCC----CCEECCCCC---CCCCC----------CC-CCCCC
T ss_conf 0127779788999925-999899997898599996888865----530202321---02467----------76-44565
Q ss_pred CCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf 33699999169872299972984999985898046999439975462999984999979999669929999665894356
Q 000707 254 LYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVH 333 (1341)
Q Consensus 254 ~~~~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l~~~~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~~~ 333 (1341)
..+.+++|+|+++.++.++ ++.+.+||+.++..+..+.. .+...+..+.++|++..+++++.||+|++|+..++....
T Consensus 799 ~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~ 876 (1249)
T 3sfz_A 799 VIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHT-GHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVA 876 (1249)
T ss_dssp CCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEEC-SSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEE
T ss_pred CEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECC-CCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEE
T ss_conf 0179999978998899975-89599999568972357747-877760799982788889999479869999867895653
Q ss_pred EEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf 66302112245676678986289997058201122210026899999986566898742234235665389999738809
Q 000707 334 VMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKV 413 (1341)
Q Consensus 334 ~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I 413 (1341)
.+.+.. ..|..+.++++ +..+++++.||.|
T Consensus 877 ~~~~h~------------~~v~~v~~spd--------------------------------------g~~l~s~s~dg~v 906 (1249)
T 3sfz_A 877 DCRGHL------------SWVHGVMFSPD--------------------------------------GSSFLTASDDQTI 906 (1249)
T ss_dssp EECCCS------------SCEEEEEECTT--------------------------------------SSEEEEEETTSCE
T ss_pred ECCCCC------------CCEEEEEECCC--------------------------------------CCEEEEEECCCEE
T ss_conf 227876------------65689999899--------------------------------------9989999589728
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99982245435454443444777642221245965445767665100013421223468889999987776554225988
Q 000707 414 WNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSL 493 (1341)
Q Consensus 414 ~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l 493 (1341)
++|++.......... .. ....+.+.... ......+. .. ........
T Consensus 907 ~vw~~~~~~~~~~~~------~~-~~~~~~~~~~~---------~~~~~~~~-------~~-----------~~~~~~~~ 952 (1249)
T 3sfz_A 907 RVWETKKVCKNSAIV------LK-QEIDVVFQENE---------TMVLAVDN-------IR-----------GLQLIAGK 952 (1249)
T ss_dssp EEEEHHHHHSCCSSS------EE-EEEEEEEETTE---------EEEEEEES-------SS-----------SEEEEEES
T ss_pred EEEECCCCCEEEEEC------CC-CEEEEEECCCC---------CEEEEECC-------CC-----------CEEEEECC
T ss_conf 988746652010211------33-10368975998---------68998137-------76-----------24898447
Q ss_pred EEE-CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCC
Q ss_conf 430-2236766299996399721001269987789998999991899299996899908899743178757999739983
Q 000707 494 DGQ-LQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSR 572 (1341)
Q Consensus 494 ~g~-l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg~~~~~l~~H~~~V~~i~~s~~~~ 572 (1341)
.+. .......+++++++| ++.++++|+.||.|++||+.++.....+.+|...|++++|+++++
T Consensus 953 ~~~~~~~~~~~i~~~~~sp----------------~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~ 1016 (1249)
T 3sfz_A 953 TGQIDYLPEAQVSCCCLSP----------------HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGK 1016 (1249)
T ss_dssp SCCEEEECCSCEEEEEECT----------------TSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSS
T ss_pred CCEEEECCCCCEEEEEECC----------------CCCEEEEECCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCC
T ss_conf 6508972567278999958----------------997799986999889997578723443036777168999989999
Q ss_pred -EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEE
Q ss_conf -8998438764346740185999985589300369901699999699998799998999999996999966478711341
Q 000707 573 -LVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRS 651 (1341)
Q Consensus 573 -liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~~~l~~ 651 (1341)
+++.+. ++.+++||+.++.... ..+ |...|.++.++|++ .+++++.|+.+++||+ .++.+++.
T Consensus 1017 ~l~s~~~----------dg~i~vwd~~~~~~~~---~~~-~~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~-~~~~~~~~ 1080 (1249)
T 3sfz_A 1017 TLISSSE----------DSVIQVWNWQTGDYVF---LQA-HQETVKDFRLLQDS-RLLSWSFDGTVKVWNV-ITGRIERD 1080 (1249)
T ss_dssp CEEEECS----------SSBEEEEETTTTEEEC---CBC-CSSCEEEEEECSSS-EEEEEESSSEEEEEET-TTTCCCEE
T ss_pred EEEEECC----------CCEEEEEECCCCCEEE---EEC-CCCCEEEEEECCCC-CEEEEECCCCEEEEEC-CCCCEEEE
T ss_conf 8999869----------9879999879996689---852-78738999990899-5899978896899888-98865588
Q ss_pred CC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 26---764799985999999999999966666557787756778666632378998677878866899984999966996
Q 000707 652 LA---LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGA 728 (1341)
Q Consensus 652 l~---~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~ 728 (1341)
+. ..+++++|+|+ +..+++++.||+
T Consensus 1081 ~~~~~~~v~~~~~s~d----------------------------------------------------~~~l~s~s~d~~ 1108 (1249)
T 3sfz_A 1081 FTCHQGTVLSCAISSD----------------------------------------------------ATKFSSTSADKT 1108 (1249)
T ss_dssp EECCSSCCCCEEECSS----------------------------------------------------SSSCEEECCSSC
T ss_pred ECCCCCCEEEEEECCC----------------------------------------------------CCEEEEECCCCC
T ss_conf 7466884899999899----------------------------------------------------998999849994
Q ss_pred EEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EEEE---------CCCCCC
Q ss_conf 99999449723126678899752345663999965--59999999579949999899995-2430---------257776
Q 000707 729 LGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SSQF---------STHREG 796 (1341)
Q Consensus 729 I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iWDl~t~~-~~~l---------~gH~~~ 796 (1341)
|++|++....... .+.+|.+.|++++| ||++|++|+.||+|++||+.+++ ...+ .+|.+.
T Consensus 1109 v~iwd~~~~~~~~--------~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 1180 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLH--------ELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGW 1180 (1249)
T ss_dssp CCEECSSSSSCSB--------CCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSC
T ss_pred EEEEECCCCCEEE--------EECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCE
T ss_conf 8998789850012--------55068776799999799998999828997999988999457885144444210256742
Q ss_pred EEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCE
Q ss_conf 78999916999998778799998899099998898874333334677799847999980899889998599999789929
Q 000707 797 IRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADSSF 876 (1341)
Q Consensus 797 V~~i~fSP~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~~~l~~gh~~~~~V~~v~w~~~~~~~~~~~~L~sas~Dgti 876 (1341)
|.+++|+|+ + .+|+++ +|+|++||+.+++.+ ..+ .+|. ..+.++.|+++ +. .|++++.||.+
T Consensus 1181 v~~l~fs~d--g----~~l~s~--~g~v~vwd~~~g~~~-~~~-~~~~--~~i~~~~~s~d----g~--~l~~~~~dg~v 1242 (1249)
T 3sfz_A 1181 VTDVCFSPD--S----KTLVSA--GGYLKWWNVATGDSS-QTF-YTNG--TNLKKIHVSPD----FR--TYVTVDNLGIL 1242 (1249)
T ss_dssp CCEEEECTT--S----SCEEEE--SSSEEEBCSSSCBCC-CCC-CCSS--CCCCCCEECSS----SC--CEEEECTTCCE
T ss_pred EEEEEECCC--C----CEEEEC--CCEEEEEECCCCCEE-EEE-ECCC--CCCCEEEECCC----CC--EEEEECCCCEE
T ss_conf 899999789--9----989977--985999898889500-464-0047--75327999789----87--79996688179
Q ss_pred EEEECC
Q ss_conf 999846
Q 000707 877 RLIEVN 882 (1341)
Q Consensus 877 rvWdi~ 882 (1341)
.+|++.
T Consensus 1243 ~vw~l~ 1248 (1249)
T 3sfz_A 1243 YILQVL 1248 (1249)
T ss_dssp EEECCC
T ss_pred EEEEEC
T ss_conf 997643
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=1.00 E-value=1 Score=482.64 Aligned_cols=550 Identities=15% Similarity=0.203 Sum_probs=431.1
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCC
Q ss_conf 42576259989998977778996999998038986565778999998699999499969999489993999964899999
Q 000707 55 QLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPK 134 (1341)
Q Consensus 55 ~~~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~ 134 (1341)
+....|.||+. .|++++|+|+ |.+||||+.||+|+|||. +++.+..+ .+|..
T Consensus 7 ~e~~~L~GH~~-----------~V~~~a~spd--------------g~~las~~~d~~v~iWd~-~~~~~~~l--~gh~~ 58 (577)
T 2ymu_A 7 KERNRLEAHSS-----------SVRGVAFSPD--------------GQTIASASDDKTVKLWNR-NGQLLQTL--TGHSS 58 (577)
T ss_dssp CEEEEECCCSS-----------CEEEEEECTT--------------SSCEEEEETTSEEEEECT-TSCEEEEE--ECCSS
T ss_pred EEEEEECCCCC-----------CEEEEEECCC--------------CCEEEEEECCCEEEEEEC-CCCEEEEE--ECCCC
T ss_conf 89439878998-----------5799999899--------------899999938998999979-99789999--68989
Q ss_pred CCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCC
Q ss_conf 98669998554999609999938981999988999188997089975599997689998899980797299999239855
Q 000707 135 LGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKE 214 (1341)
Q Consensus 135 ~~V~~l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i~~~~~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~ 214 (1341)
+|.+++|+|++ ++|++++.|+.|++||. +|+++..+.+|...+.+++|+| |++.+++++.|+.+.+|+.....
T Consensus 59 -~V~~l~fspdg---~~las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~~~~~~~~~~~- 131 (577)
T 2ymu_A 59 -SVWGVAFSPDG---QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQL- 131 (577)
T ss_dssp -CEEEEEECTTS---SEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCCE-
T ss_pred -CEEEEEECCCC---CEEEEEECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECC-CCCEEEEECCCCCEEECCCCCCE-
T ss_conf -98999998999---99999969897999989-9978999978999889999989-99989998079833520235520-
Q ss_pred CCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECC
Q ss_conf 43035348984385101345544103657789987767533699999169872299972984999985898046999439
Q 000707 215 DEVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALP 294 (1341)
Q Consensus 215 ~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l~ 294 (1341)
.... ..+...+..+.|+|+++.++....++.+.+|+....... ...
T Consensus 132 ----~~~~---------------------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 177 (577)
T 2ymu_A 132 ----LQTL---------------------------TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ-TLT-- 177 (577)
T ss_dssp ----EEEE---------------------------CCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEE-EEE--
T ss_pred ----EEEC---------------------------CCCCCCEEEEEEECCCCCCEECCCCCCEECCCCCEEEEE-ECC--
T ss_conf ----0110---------------------------477774355542037763200255531000000000000-026--
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCC
Q ss_conf 97546299998499997999966992999966589435666302112245676678986289997058201122210026
Q 000707 295 RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCL 374 (1341)
Q Consensus 295 ~~~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~ 374 (1341)
.....+..+.+.|+++.|++++.||+|++|+.. ++....+..... .+..+.++++
T Consensus 178 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~------------~v~~~~~s~d------------ 232 (577)
T 2ymu_A 178 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSS------------SVRGVAFSPD------------ 232 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SCEEEEEECCSS------------CEEEEEECTT------------
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCEEEEEECC-CCEEEEEECCCC------------CEEEEEECCC------------
T ss_conf 877635665416997789998599989999499-968999946889------------8899999799------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999998656689874223423566538999973880999982245435454443444777642221245965445767
Q 000707 375 DAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMAS 454 (1341)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~ 454 (1341)
+..+++++.||.|++|+..... +
T Consensus 233 --------------------------g~~l~~~~~d~~i~~w~~~~~~---------------------------~---- 255 (577)
T 2ymu_A 233 --------------------------GQTIASASDDKTVKLWNRNGQL---------------------------L---- 255 (577)
T ss_dssp --------------------------SSCEEEEETTSCEEEECTTSCE---------------------------E----
T ss_pred --------------------------CCEEEEEECCCEEEEEECCCCE---------------------------E----
T ss_conf --------------------------9999999189989999599979---------------------------9----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 66510001342122346888999998777655422598843022367662999963997210012699877899989999
Q 000707 455 SADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVAL 534 (1341)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAs 534 (1341)
. .+.+|..+|+++++.| ++..+++
T Consensus 256 ------------------------------------~----~~~~~~~~v~~v~~~~----------------d~~~l~~ 279 (577)
T 2ymu_A 256 ------------------------------------Q----TLTGHSSSVNGVAFRP----------------DGQTIAS 279 (577)
T ss_dssp ------------------------------------E----EECCCSSCEEEEEECT----------------TSSEEEE
T ss_pred ------------------------------------E----EEECCCCCEEEEEECC----------------CCCEEEE
T ss_conf ------------------------------------9----9806889879999968----------------9999999
Q ss_pred EECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE-EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 9189929999689990889974317875799973998389-984387643467401859999855893003699016999
Q 000707 535 GTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRLV-SFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPER 613 (1341)
Q Consensus 535 Gs~DGtI~iWDl~tg~~~~~l~~H~~~V~~i~~s~~~~li-S~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~ 613 (1341)
++.|++|++||. ++.+...+.+|...|.+++|++++..+ +.+. ++.+++||..... +..+.+ |.
T Consensus 280 ~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~----------d~~i~~w~~~~~~---~~~~~~-~~ 344 (577)
T 2ymu_A 280 ASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASD----------DKTVKLWNRNGQH---LQTLTG-HS 344 (577)
T ss_dssp EETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEET----------TSCEEEEETTSCE---EEEECC-CS
T ss_pred EECCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEEC----------CCEEEEEECCCCE---EEEEEC-CC
T ss_conf 959997999948-99589997068897699999999999999969----------9959999699972---578747-88
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECC---CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9969999879999899999999699996647871134126---7647999859999999999999666665577877567
Q 000707 614 APIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLA---LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTT 690 (1341)
Q Consensus 614 ~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~~~l~~l~---~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~ 690 (1341)
.+|.+++|+|+|+++++++.|+.+++||. ++.++..+. .++++++|+|+
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~--~~~~~~~~~~~~~~v~~~~~s~d-------------------------- 396 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNR--NGQLLQTLTGHSSSVRGVAFSPD-------------------------- 396 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEET--TCCEEEEEECCSSCEEEEEECTT--------------------------
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEECC--CCCEEEEECCCCCCEEEEEECCC--------------------------
T ss_conf 97799999899999999969998999908--99789985278897489999899--------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEE
Q ss_conf 7866663237899867787886689998499996699699999449723126678899752345663999965--59999
Q 000707 691 DGVSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHV 768 (1341)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~L 768 (1341)
+..+++++.|+.|++|+.++..++. +.+|...+.+++| |+++|
T Consensus 397 --------------------------g~~l~~~~~d~~v~~~~~~~~~~~~---------~~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 397 --------------------------GQTIASASDDKTVKLWNRNGQLLQT---------LTGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp --------------------------SSCEEEEETTSEEEEECTTCCEEEE---------EECCSSCEEEEEECTTSSEE
T ss_pred --------------------------CCEEEEEECCCEEEEEECCCCEEEE---------ECCCCCCEEEEEECCCCCEE
T ss_conf --------------------------9999999499989999699978989---------62889975799998999999
Q ss_pred EEEECCCCEEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 99957994999989999524302577767899991699999877879999889909999889887433333467779984
Q 000707 769 VMGDRSGNIRWWDVTTGHSSQFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTL 848 (1341)
Q Consensus 769 asgs~DG~I~iWDl~t~~~~~l~gH~~~V~~i~fSP~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~~~l~~gh~~~~~ 848 (1341)
++++.|++|++||........+.+|...|.+++|+|+ + .+||+++.|++|+|||.. ++ +...+ .+|. ..
T Consensus 442 ~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd--~----~~las~~~d~~i~iw~~~-~~-~~~~~-~~h~--~~ 510 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--G----QTIASASDDKTVKLWNRN-GQ-LLQTL-TGHS--SS 510 (577)
T ss_dssp EEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTT--S----CEEEEEETTSEEEEEETT-SC-EEEEE-ECCS--SC
T ss_pred EEECCCCEEEEEECCCCEEEEECCCCCCEEEEEECCC--C----CEEEEEECCCEEEEECCC-CC-EEEEE-ECCC--CC
T ss_conf 9993999899997999889997278997789999699--9----999999198979999399-97-89998-6799--99
Q ss_pred EEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCCEECCCCCCCCHHCCCCCCCCCCCCCCCCCH
Q ss_conf 7999980899889998599999789929999846884002334530000126788754440046103
Q 000707 849 VLELDWLPTRTDKNDPLVLCIAGADSSFRLIEVNTEKKIGYTSQSRAIKERFRPMPLCLPILLPTSH 915 (1341)
Q Consensus 849 V~~v~w~~~~~~~~~~~~L~sas~DgtirvWdi~~~~~~~~~~~~~~~~~~~~~~pv~~~~~l~~~~ 915 (1341)
|.+++|+|+ ++ +|++++.|++|++||.. +++.. . ...+ ..+|++..|.|.+.
T Consensus 511 v~~l~~s~d----g~--~l~s~~~dg~v~lwd~~-~~~~~----~--~~~h--~~~v~~~~fs~dg~ 562 (577)
T 2ymu_A 511 VRGVAFSPD----GQ--TIASASDDKTVKLWNRN-GQLLQ----T--LTGH--SSSVWGVAFSPDGQ 562 (577)
T ss_dssp EEEEEECTT----SS--CEEEEETTSEEEEECTT-SCEEE----E--EECC--SSCEEEEEECTTSS
T ss_pred EEEEEECCC----CC--EEEEEECCCEEEEEECC-CCEEE----E--ECCC--CCCEEEEEECCCCC
T ss_conf 899999189----99--99999896999999699-97898----9--7188--88878999968999
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=1.00 E-value=1 Score=474.00 Aligned_cols=561 Identities=12% Similarity=0.067 Sum_probs=423.8
Q ss_pred EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 57625998999897777899699999803898656577899999869999949996999948999399996489999998
Q 000707 57 ISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLG 136 (1341)
Q Consensus 57 ~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~ 136 (1341)
..++.+|.. .|++++|+|+ |.+||+|+.||+|+|||+.++..+..+ .+|.. +
T Consensus 608 ~~~~~~h~~-----------~v~~~~~s~~--------------~~~l~s~~~d~~i~vw~~~~~~~~~~~--~~h~~-~ 659 (1249)
T 3sfz_A 608 RLVVRPHTD-----------AVYHACFSQD--------------GQRIASCGADKTLQVFKAETGEKLLDI--KAHED-E 659 (1249)
T ss_dssp SEEECCCSS-----------CEEEEEECTT--------------SSEEEEEETTSCEEEEETTTCCEEEEE--CCCSS-C
T ss_pred EEEEECCCC-----------CEEEEEECCC--------------CCEEEEEECCCEEEEEECCCCCEEEEE--CCCCC-C
T ss_conf 278716666-----------4899998799--------------998999948894999998999788876--06777-7
Q ss_pred EEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC-CCCEEEEEECCCEEEEEEECCCCCC
Q ss_conf 669998554999609999938981999988999188997089975599997689-9988999807972999992398554
Q 000707 137 IQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPF-DARHFCVLGLKGLLLSVRVLGQKED 215 (1341)
Q Consensus 137 V~~l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i~~~~~~~~~i~~lsfsP~-d~~~la~~~~dg~i~~~d~~~~~~~ 215 (1341)
|.+++|+|++ .+|++++.|+.|.+||+.+|+.+..+..|...+.+++|+|. +...+++++.||.+.+||+.....
T Consensus 660 v~~~~~s~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~- 735 (1249)
T 3sfz_A 660 VLCCAFSSDD---SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC- 735 (1249)
T ss_dssp EEEEEECTTS---SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-
T ss_pred EEEEEEECCC---CEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCH-
T ss_conf 8999992699---989998189959998779993689995899737999984089965999980897099998999634-
Q ss_pred CEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEECCC
Q ss_conf 30353489843851013455441036577899877675336999991698722999729849999858980469994399
Q 000707 216 EVVVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAALPR 295 (1341)
Q Consensus 216 ~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l~~ 295 (1341)
...+ ..+...+..++|+|+++.+++++.|+.|++||+.+++....+...+
T Consensus 736 ---~~~~---------------------------~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 785 (1249)
T 3sfz_A 736 ---RNTM---------------------------FGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKR 785 (1249)
T ss_dssp ---EEEE---------------------------CCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCC
T ss_pred ---HHEE---------------------------CCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCCEECCCC
T ss_conf ---2201---------------------------2777978899992599989999789859999688886553020232
Q ss_pred C-----------CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 7-----------54629999849999799996699299996658943566630211224567667898628999705820
Q 000707 296 G-----------CAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSES 364 (1341)
Q Consensus 296 ~-----------~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~ 364 (1341)
. ...+..+.++|+++.+++++ ++.|.+|+..++.....+.... ...+..+.++++
T Consensus 786 ~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~-----------~~~v~~~~~sp~-- 851 (1249)
T 3sfz_A 786 FFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGH-----------HSTIQYCDFSPY-- 851 (1249)
T ss_dssp CC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSS-----------SSCCCEEEECSS--
T ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEC-CCCEEEEEECCCCCEEEECCCC-----------CCCEEEEEECCC--
T ss_conf 10246776445650179999978998899975-8959999956897235774787-----------776079998278--
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11222100268999999865668987422342356653899997388099998224543545444344477764222124
Q 000707 365 TIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVAL 444 (1341)
Q Consensus 365 i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~ 444 (1341)
+..+++++.||.|.+|++..+...
T Consensus 852 ------------------------------------~~~l~~~~~dg~v~vwd~~~~~~~-------------------- 875 (1249)
T 3sfz_A 852 ------------------------------------DHLAVIALSQYCVELWNIDSRLKV-------------------- 875 (1249)
T ss_dssp ------------------------------------TTEEEEECSSSCEEEEETTTTEEE--------------------
T ss_pred ------------------------------------CCEEEEEECCCEEEEEECCCCCEE--------------------
T ss_conf ------------------------------------888999947986999986789565--------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 59654457676651000134212234688899999877765542259884302236766299996399721001269987
Q 000707 445 CGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNY 524 (1341)
Q Consensus 445 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~ 524 (1341)
..+.+|..+|++++++|
T Consensus 876 --------------------------------------------------~~~~~h~~~v~~v~~sp------------- 892 (1249)
T 3sfz_A 876 --------------------------------------------------ADCRGHLSWVHGVMFSP------------- 892 (1249)
T ss_dssp --------------------------------------------------EEECCCSSCEEEEEECT-------------
T ss_pred --------------------------------------------------EECCCCCCCEEEEEECC-------------
T ss_conf --------------------------------------------------32278766568999989-------------
Q ss_pred CCCCCCEEEEEECCCCEEEEECCCCCE-----------------------------EE--------EEEECCCCEEEEEE
Q ss_conf 789998999991899299996899908-----------------------------89--------97431787579997
Q 000707 525 PAVAVPLVALGTQSGAVDVVDVSANAV-----------------------------TA--------SFSVHNGTVRGLRW 567 (1341)
Q Consensus 525 ~~~~~~llAsGs~DGtI~iWDl~tg~~-----------------------------~~--------~l~~H~~~V~~i~~ 567 (1341)
++..+++++.||+|++||+.++.. .. ....+...+.+++|
T Consensus 893 ---dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 893 ---DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp ---TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred ---CCCEEEEEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCEEEECCCCCEEEEEE
T ss_conf ---99989999589728988746652010211331036897599868998137762489844765089725672789999
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 39983899843876434674018599998558930036990169999969999879999899999999699996647871
Q 000707 568 LGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPI 647 (1341)
Q Consensus 568 s~~~~liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~~ 647 (1341)
++++.++..+.. ++.+.+||+.++. .+..+.+ |..+|+++.|+|+|+++++++.|+.|++||+ .++.
T Consensus 970 sp~g~~l~~g~~---------~g~i~i~d~~~~~--~~~~~~~-h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~-~~~~ 1036 (1249)
T 3sfz_A 970 SPHLEYVAFGDE---------DGAIKIIELPNNR--VFSSGVG-HKKAVRHIQFTADGKTLISSSEDSVIQVWNW-QTGD 1036 (1249)
T ss_dssp CTTSSEEEEEET---------TSCCEEEETTTTS--CEEECCC-CSSCCCCEEECSSSSCEEEECSSSBEEEEET-TTTE
T ss_pred CCCCCEEEEECC---------CCCEEEEECCCCC--EEEECCC-CCCCEEEEEECCCCCEEEEECCCCEEEEEEC-CCCC
T ss_conf 589977999869---------9988999757872--3443036-7771689999899998999869987999987-9996
Q ss_pred EEEECC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 134126--764799985999999999999966666557787756778666632378998677878866899984999966
Q 000707 648 MLRSLA--LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGSQDDTSESFAFALA 725 (1341)
Q Consensus 648 ~l~~l~--~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~~ 725 (1341)
...... ..+..+.|+++ ..+++++.
T Consensus 1037 ~~~~~~~~~~v~~~~~~~~-----------------------------------------------------~~l~~~~~ 1063 (1249)
T 3sfz_A 1037 YVFLQAHQETVKDFRLLQD-----------------------------------------------------SRLLSWSF 1063 (1249)
T ss_dssp EECCBCCSSCEEEEEECSS-----------------------------------------------------SEEEEEES
T ss_pred EEEEECCCCCEEEEEECCC-----------------------------------------------------CCEEEEEC
T ss_conf 6898527873899999089-----------------------------------------------------95899978
Q ss_pred CCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EEEECCCCCCEEEEEE
Q ss_conf 99699999449723126678899752345663999965--59999999579949999899995-2430257776789999
Q 000707 726 NGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SSQFSTHREGIRRIKF 802 (1341)
Q Consensus 726 Dg~I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iWDl~t~~-~~~l~gH~~~V~~i~f 802 (1341)
||++++|++....... .+.+|.+.+.+++| |++++++++.||+|++||+.++. ...+.+|.+.|.+++|
T Consensus 1064 dg~v~vwd~~~~~~~~--------~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~ 1135 (1249)
T 3sfz_A 1064 DGTVKVWNVITGRIER--------DFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAF 1135 (1249)
T ss_dssp SSEEEEEETTTTCCCE--------EEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCEEE--------EECCCCCCEEEEEECCCCCEEEEECCCCCEEEEECCCCCEEEEECCCCCCEEEEEE
T ss_conf 8968998889886558--------87466884899999899998999849994899878985001255068776799999
Q ss_pred CCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCC--------CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCC
Q ss_conf 1699999877879999889909999889887433333--------46777998479999808998899985999997899
Q 000707 803 SPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSL--------LQPQFPGTLVLELDWLPTRTDKNDPLVLCIAGADS 874 (1341)
Q Consensus 803 SP~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~~~l--------~~gh~~~~~V~~v~w~~~~~~~~~~~~L~sas~Dg 874 (1341)
+|+ + .+|++++.||+|++||+.+++.+. .+ ..+| ...|.+++|+|+ +. +|++++ |
T Consensus 1136 s~d--g----~~lat~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~~~~~--~~~v~~l~fs~d----g~--~l~s~~--g 1198 (1249)
T 3sfz_A 1136 SLD--G----ILLATGDDNGEIRIWNVSDGQLLH-SCAPISVEEGTATH--GGWVTDVCFSPD----SK--TLVSAG--G 1198 (1249)
T ss_dssp CSS--S----SEEEEEETTSCCCEEESSSSCCCC-CCCCCC-------C--CSCCCEEEECTT----SS--CEEEES--S
T ss_pred CCC--C----CEEEEEECCCEEEEEECCCCCEEE-EECCCCCCCCCCCC--CCEEEEEEECCC----CC--EEEECC--C
T ss_conf 799--9----989998289979999889994578-85144444210256--742899999789----99--899779--8
Q ss_pred CEEEEECCCCCEECCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf 2999984688400233453000012678875444004610
Q 000707 875 SFRLIEVNTEKKIGYTSQSRAIKERFRPMPLCLPILLPTS 914 (1341)
Q Consensus 875 tirvWdi~~~~~~~~~~~~~~~~~~~~~~pv~~~~~l~~~ 914 (1341)
++++||+.++++... .... ..++.+..|.|.+
T Consensus 1199 ~v~vwd~~~g~~~~~----~~~~----~~~i~~~~~s~dg 1230 (1249)
T 3sfz_A 1199 YLKWWNVATGDSSQT----FYTN----GTNLKKIHVSPDF 1230 (1249)
T ss_dssp SEEEBCSSSCBCCCC----CCCS----SCCCCCCEECSSS
T ss_pred EEEEEECCCCCEEEE----EECC----CCCCCEEEECCCC
T ss_conf 599989888950046----4004----7753279997898
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=464.13 Aligned_cols=555 Identities=15% Similarity=0.162 Sum_probs=432.7
Q ss_pred CCCCCCCCEEECCCC-EEEEECCCEEEEEECCCC----CEEEEECCCCCCCCCCCCCCCCC-EEEEEECC--CCCCCCCC
Q ss_conf 989997724717999-399971993999968996----42576259989998977778996-99999803--89865657
Q 000707 22 PSRNNFGSADLSPSG-LLAFASGSSISILDSRSL----QLISTIPIPPPTSAGSVASLSPF-VTAVKWIP--ITLRCDLL 93 (1341)
Q Consensus 22 ~~~~~~~~~~~s~~g-llA~g~~~~V~i~d~~s~----~~~~~l~~H~~~~~~~~~~~~~~-Vt~v~~sp--~~~~~~~~ 93 (1341)
.|+..+.+++|+|+| ++|+++++.|.|||..++ +.+..+.+|.. . |++++|+| +
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~-----------~~v~~~~~sp~~~------- 77 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGS-----------SVVTTVKFSPIKG------- 77 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTT-----------SCEEEEEECSSTT-------
T ss_pred CCCCCEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEECCCC-----------CEEEEEEECCCCC-------
T ss_conf 7658536899889999799935984999977788776514318805788-----------4499999796789-------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEECCCC--------EEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECC----CEE
Q ss_conf 7899999869999949996999948999--------3999964899999986699985549996099999389----819
Q 000707 94 STEPGSSHLLLAAADRHGRVALLDFRLR--------SVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGP----SVL 161 (1341)
Q Consensus 94 s~~~~~~g~~LASg~~dG~V~IWDv~tg--------~~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~~d----~~I 161 (1341)
+.+||+|+.||.|+|||+.++ .....+ ..|.. +|.+++|+|++ .+|++++.+ +.|
T Consensus 78 -------~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~--~~~~~-~v~~~~~s~~~---~~l~~~~~~~~~~~~v 144 (615)
T 1pgu_A 78 -------SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEF--QVLAG-PISDISWDFEG---RRLCVVGEGRDNFGVF 144 (615)
T ss_dssp -------CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEE--ECCSS-CEEEEEECTTS---SEEEEEECCSSCSEEE
T ss_pred -------CCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHH--HCCCC-CEEEEEEECCC---CEEEEECCCCCCCCEE
T ss_conf -------98899964898799976888765544554200011--12566-37999990799---9899931687775579
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCCCC-EEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCC
Q ss_conf 99988999188997089975599997689998-89998079729999923985543035348984385101345544103
Q 000707 162 SLYNTTSASCMWKYDASPEYLSCIRRNPFDAR-HFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSA 240 (1341)
Q Consensus 162 ~lWd~~tG~~i~~~~~~~~~i~~lsfsP~d~~-~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~ 240 (1341)
.+|| +++.+..+..|...+.+++|+| ++. .+++++.||.+.+||..... ....+.
T Consensus 145 ~~~d--~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~----~~~~~~----------------- 200 (615)
T 1pgu_A 145 ISWD--SGNSLGEVSGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFK----FSASDR----------------- 200 (615)
T ss_dssp EETT--TCCEEEECCSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBE----EEEEEC-----------------
T ss_pred EEEE--CCCCCEEEECCCCCEEEEEECC-CCCCEEEEEECCCCEEEEECCCCC----EEEEEC-----------------
T ss_conf 9997--8981031306774388999887-899689999579959999699961----013202-----------------
Q ss_pred CCCCCCCCCCCCCC---CEEEEEECCC-CCCEEEEECCCEEEEEECCCCCEEEEEECC--CCCCCEEEEEECCCCCEEEE
Q ss_conf 65778998776753---3699999169-872299972984999985898046999439--97546299998499997999
Q 000707 241 GAASLSPASGLFPL---YMVKFTFSPH-WRHIIFVTFPRELVVFDLQYETPLFSAALP--RGCAKFLDVLADPNNDLLYC 314 (1341)
Q Consensus 241 ~~~~~~p~~~~~~~---~~~~~~fSpd-g~~ll~~~~d~~I~iwDl~~~~~i~~~~l~--~~~~~~~~v~~~pdg~~L~s 314 (1341)
.+.. .+.+++|+|+ ++.+++++.|+.|++||+.+++.+..+... .+..++..+.++ +++.|++
T Consensus 201 ----------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 201 ----------THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFAT 269 (615)
T ss_dssp ----------SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEE
T ss_pred ----------CCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEEEC-CCCEEEE
T ss_conf ----------56777742899997897788899986898089998999978589525444567755899981-8997999
Q ss_pred EECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96699299996658943566630211224567667898628999705820112221002689999998656689874223
Q 000707 315 AHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSD 394 (1341)
Q Consensus 315 ~~~DgtI~lW~~~~g~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 394 (1341)
++.||+|++|+.++++.+..+..... + ... .+....+.
T Consensus 270 ~~~d~~i~~wd~~~~~~~~~~~~~~~--~-----~~~-~~~~~~~~---------------------------------- 307 (615)
T 1pgu_A 270 VGADATIRVWDVTTSKCVQKWTLDKQ--Q-----LGN-QQVGVVAT---------------------------------- 307 (615)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTT--C-----GGG-CEEEEEEE----------------------------------
T ss_pred ECCCCCEEEEECCCCCEEEEECCCCC--C-----CCC-CEEEEEEC----------------------------------
T ss_conf 84899489997888927878847877--5-----457-14699918----------------------------------
Q ss_pred CCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 42356653899997388099998224543545444344477764222124596544576766510001342122346888
Q 000707 395 DTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSR 474 (1341)
Q Consensus 395 ~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1341)
++..+++++.||.|.+|++..+...
T Consensus 308 -----~~~~l~~~~~~g~i~~~d~~~~~~~-------------------------------------------------- 332 (615)
T 1pgu_A 308 -----GNGRIISLSLDGTLNFYELGHDEVL-------------------------------------------------- 332 (615)
T ss_dssp -----ETTEEEEEETTSCEEEEETTEEEEE--------------------------------------------------
T ss_pred -----CCCEEEEEECCCCEEEEECCCCCEE--------------------------------------------------
T ss_conf -----9976999978997899988899288--------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE
Q ss_conf 99999877765542259884302236766299996399721001269987789998999991899299996899908899
Q 000707 475 NRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTAS 554 (1341)
Q Consensus 475 ~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg~~~~~ 554 (1341)
..+.+|..+|+++++ | + +++|+.||.|++||+. ...
T Consensus 333 --------------------~~~~~~~~~v~~~~~-~----------------~---l~~~~~dg~i~~w~~~---~~~- 368 (615)
T 1pgu_A 333 --------------------KTISGHNKGITALTV-N----------------P---LISGSYDGRIMEWSSS---SMH- 368 (615)
T ss_dssp --------------------EEECCCSSCEEEEET-T----------------T---TEEEETTSCEEETTTT---EEE-
T ss_pred --------------------EEEECCCCCEEEEEE-C----------------C---CEEECCCCEEEEEECH---HHC-
T ss_conf --------------------999477787899995-6----------------7---4898799959998752---415-
Q ss_pred EEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEECC
Q ss_conf 74317875799973998389984387643467401859999855893003699016999996999987999989999999
Q 000707 555 FSVHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYLLILFRD 634 (1341)
Q Consensus 555 l~~H~~~V~~i~~s~~~~liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~~~I~~i~~Spdg~~Las~s~D 634 (1341)
..|...|.++.|.++..+++.+.+ +.+++||+.++. . ...+.+++++|+|++++++ .+
T Consensus 369 -~~~~~~v~~~~~~~~~~l~~~~~d----------~~i~~~~~~~~~--~--------~~~~~~~~~s~~~~~~~~~-~~ 426 (615)
T 1pgu_A 369 -QDHSNLIVSLDNSKAQEYSSISWD----------DTLKVNGITKHE--F--------GSQPKVASANNDGFTAVLT-ND 426 (615)
T ss_dssp -CCCCSCEEEEECCSTTCCEEEETT----------TEEEETTEEEEE--C--------SSCEEEEEECSSSEEEEEE-TT
T ss_pred -CCCCCCEEEEEECCCCEEEEEECC----------CCEEEEECCCCC--C--------CCCCEEEEECCCCCEEEEE-CC
T ss_conf -755685179997898679999589----------979998866676--3--------6784699982898789996-79
Q ss_pred CCEEEEECCCCCCEEEECC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9699996647871134126--76479998599999999999996666655778775677866663237899867787886
Q 000707 635 APVEVWAMTKNPIMLRSLA--LPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSSDSKDASSEGS 712 (1341)
Q Consensus 635 ~~i~iWdl~kt~~~l~~l~--~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 712 (1341)
+.+++|++ .+++.++.+. .++++++|+
T Consensus 427 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------- 455 (615)
T 1pgu_A 427 DDLLILQS-FTGDIIKSVRLNSPGSAVSLS-------------------------------------------------- 455 (615)
T ss_dssp SEEEEEET-TTCCEEEEEECSSCEEEEEEC--------------------------------------------------
T ss_pred CCEEEEEC-CCCCEEEECCCCCCCEEEEEC--------------------------------------------------
T ss_conf 82699944-678665551567872077883--------------------------------------------------
Q ss_pred CCCCCCEEEEEEC-CCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEEECCCCC-EE
Q ss_conf 6899984999966-99699999449723126678899752345663999965--59999999579949999899995-24
Q 000707 713 QDDTSESFAFALA-NGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWWDVTTGH-SS 788 (1341)
Q Consensus 713 ~~~~~e~la~~~~-Dg~I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iWDl~t~~-~~ 788 (1341)
++.++++.. ||.+++|++....+.. . .+.+|...+.+++| ++++|++|+.||.|++||+.+++ ..
T Consensus 456 ----~~~l~~~~~~d~~i~~~~~~~~~~~~--~-----~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 456 ----QNYVAVGLEEGNTIQVFKLSDLEVSF--D-----LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT 524 (615)
T ss_dssp ----SSEEEEEETTTSCEEEEETTEEEEEE--E-----CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ----CCEEEEEECCCCEEEEEECCCCCCCC--C-----CCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEECCCCCCEE
T ss_conf ----88899965689869999888854353--3-----367765750799998999989981799859986577776246
Q ss_pred EECC-CCCCEEEEEECC----------CCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCC
Q ss_conf 3025-777678999916----------99999877879999889909999889887433333467779984799998089
Q 000707 789 QFST-HREGIRRIKFSP----------VVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQPQFPGTLVLELDWLPT 857 (1341)
Q Consensus 789 ~l~g-H~~~V~~i~fSP----------~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~~~l~~gh~~~~~V~~v~w~~~ 857 (1341)
.+.+ |...|.+++|+| + + .+|++++.|++|++||+.++......+ .+|. ..|.+++|+++
T Consensus 525 ~~~~~h~~~v~~~~~sp~~~~~~~~~~~--~----~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~h~--~~v~~l~~s~~ 595 (615)
T 1pgu_A 525 SRWAFRTSKINAISWKPAEKGANEEEIE--E----DLVATGSLDTNIFIYSVKRPMKIIKAL-NAHK--DGVNNLLWETP 595 (615)
T ss_dssp CCSCCCSSCEEEEEECCCC------CCS--C----CEEEEEETTSCEEEEESSCTTCCEEET-TSST--TCEEEEEEEET
T ss_pred EEECCCCCCEEEEEECCCCCCCCCCCCC--C----CEEEEECCCCCEEEEECCCCCEECHHH-HCCC--CCEEEEEECCC
T ss_conf 7604788714699976832345332468--8----889998179719999778885403113-3594--30589997389
Q ss_pred CCCCCCCEEEEEEECCCCEEEEECCC
Q ss_conf 98899985999997899299998468
Q 000707 858 RTDKNDPLVLCIAGADSSFRLIEVNT 883 (1341)
Q Consensus 858 ~~~~~~~~~L~sas~DgtirvWdi~~ 883 (1341)
+. |++++.||+|++|++..
T Consensus 596 ----~~---l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 596 ----ST---LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ----TE---EEEEETTSCEEEEEEC-
T ss_pred ----CC---EEEECCCCEEEEEEEEC
T ss_conf ----97---28845996399996015
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=1.00 E-value=1 Score=457.88 Aligned_cols=554 Identities=13% Similarity=0.116 Sum_probs=402.1
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEE
Q ss_conf 69999980389865657789999986999994999699994899939999648999999866999855499960999993
Q 000707 77 FVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAIN 156 (1341)
Q Consensus 77 ~Vt~v~~sp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~ 156 (1341)
.+++|+|+|+ |.+||+++ ++.|+|||+.++.....+ .+|.. .|.+++|+|++ ++||+++
T Consensus 20 ~~~~~~~spd--------------g~~l~~~~-~~~v~l~~~~~~~~~~~~--~~h~~-~v~~~~~spdg---~~lasg~ 78 (611)
T 1nr0_A 20 TAVVLGNTPA--------------GDKIQYCN-GTSVYTVPVGSLTDTEIY--TEHSH-QTTVAKTSPSG---YYCASGD 78 (611)
T ss_dssp CCCCCEECTT--------------SSEEEEEE-TTEEEEEETTCSSCCEEE--CCCSS-CEEEEEECTTS---SEEEEEE
T ss_pred CEEEEEECCC--------------CCEEEECC-CCEEEEECCCCCCCCEEE--CCCCC-CEEEEEECCCC---CEEEEEE
T ss_conf 2369766799--------------99799679-997999457872427376--58998-65999999999---6899994
Q ss_pred CCCEEEEEECCCCE--EEEEEECCCCCEEEEEECCCCCCEEEEEECC----CEEEEEEECCCCCCCEEEEEEEEECCCCH
Q ss_conf 89819999889991--8899708997559999768999889998079----72999992398554303534898438510
Q 000707 157 GPSVLSLYNTTSAS--CMWKYDASPEYLSCIRRNPFDARHFCVLGLK----GLLLSVRVLGQKEDEVVVKELQIQTDCTE 230 (1341)
Q Consensus 157 ~d~~I~lWd~~tG~--~i~~~~~~~~~i~~lsfsP~d~~~la~~~~d----g~i~~~d~~~~~~~~~~~k~~~i~~~~~~ 230 (1341)
.|+.|++||+.+++ ....+..|...+.+++|+| |++++++++.+ +.+.+||. +. . ..
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd~-~~-~----~~---------- 141 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDT-GT-S----NG---------- 141 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTT-CC-B----CB----------
T ss_pred CCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECC-CCCEEEEEECCCCCEEEEEEEEC-CC-C----CC----------
T ss_conf 89978994898984156676225578448999899-99979999899773669999638-99-7----63----------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCC-EEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCC
Q ss_conf 1345544103657789987767533699999169872-299972984999985898046999439975462999984999
Q 000707 231 LLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWRH-IIFVTFPRELVVFDLQYETPLFSAALPRGCAKFLDVLADPNN 309 (1341)
Q Consensus 231 l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~fSpdg~~-ll~~~~d~~I~iwDl~~~~~i~~~~l~~~~~~~~~v~~~pdg 309 (1341)
. ...+...+.+++|+|+++. +++++.|++|++||.+.++.+.++. ++...+..+.++||+
T Consensus 142 --~---------------l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~--~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 142 --N---------------LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG--EHTKFVHSVRYNPDG 202 (611)
T ss_dssp --C---------------CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC--CCSSCEEEEEECTTS
T ss_pred --E---------------ECCCCCCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEEEEC--CCCCCEEEEEECCCC
T ss_conf --2---------------547889836999889998299999289809999799975766520--025716999997999
Q ss_pred CEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 97999966992999966589435666302112245676678986289997058201122210026899999986566898
Q 000707 310 DLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSP 389 (1341)
Q Consensus 310 ~~L~s~~~DgtI~lW~~~~g~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~ 389 (1341)
++|++++.|++|++|+..++++...+.. .. ....+ ....|..+.++|+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~-~~-~~~~~---h~~~V~~v~~spd--------------------------- 250 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFED-DS-LKNVA---HSGSVFGLTWSPD--------------------------- 250 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBC-TT-SSSCS---SSSCEEEEEECTT---------------------------
T ss_pred CEEEEEECCCCEEEEECCCCCEEEEECC-CC-CCCCC---CCCCEEEEEECCC---------------------------
T ss_conf 9899998999199988999828665136-64-32356---6787899999799---------------------------
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 74223423566538999973880999982245435454443444777642221245965445767665100013421223
Q 000707 390 FEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEH 469 (1341)
Q Consensus 390 ~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 469 (1341)
+..|++++.||.|++|++.++......+ .
T Consensus 251 -----------g~~l~s~s~D~~v~lWd~~~~~~~~~~~---------------------~------------------- 279 (611)
T 1nr0_A 251 -----------GTKIASASADKTIKIWNVATLKVEKTIP---------------------V------------------- 279 (611)
T ss_dssp -----------SSEEEEEETTSEEEEEETTTTEEEEEEE---------------------C-------------------
T ss_pred -----------CCEEEEEECCCEEEEEECCCCCEEEEEC---------------------C-------------------
T ss_conf -----------9999999089809999688870134404---------------------7-------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 46888999998777655422598843022367662999963997210012699877899989999918992999968999
Q 000707 470 VNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSAN 549 (1341)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg 549 (1341)
+ ..+...+..+.+. +..+++++.||+|++||..++
T Consensus 280 -------------------------~--~~~~~~~~~~~~~------------------~~~l~s~s~d~~i~~~~~~~~ 314 (611)
T 1nr0_A 280 -------------------------G--TRIEDQQLGIIWT------------------KQALVSISANGFINFVNPELG 314 (611)
T ss_dssp -------------------------C--SSGGGCEEEEEEC------------------SSCEEEEETTCCEEEEETTTT
T ss_pred -------------------------C--CCCCCEEEEEEEC------------------CCEEEEEECCCCEEEEECCCC
T ss_conf -------------------------8--8766406899973------------------887999958996899968899
Q ss_pred CEEEEEEECCCCEEEEEECCCCCEE-EEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCEE
Q ss_conf 0889974317875799973998389-984387643467401859999855893003699016999996999987999989
Q 000707 550 AVTASFSVHNGTVRGLRWLGNSRLV-SFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPERAPIRALRASSSGRYL 628 (1341)
Q Consensus 550 ~~~~~l~~H~~~V~~i~~s~~~~li-S~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~~~~I~~i~~Spdg~~L 628 (1341)
.+...+.+|...|++++|+++++.+ +++. ++.+++||+.++. ..+.+...|...|.++.|++++ .+
T Consensus 315 ~~~~~~~gh~~~v~~l~~spdg~~l~s~s~----------D~~v~~Wd~~~~~--~~~~~~~~h~~~v~~~~~s~~~-~l 381 (611)
T 1nr0_A 315 SIDQVRYGHNKAITALSSSADGKTLFSADA----------EGHINSWDISTGI--SNRVFPDVHATMITGIKTTSKG-DL 381 (611)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEET----------TSCEEEEETTTCC--EEECSSCSCSSCEEEEEECTTS-CE
T ss_pred CCCEEECCCCCCEEEEEEECCCCEEEEEEC----------CCCEEEEECCCCC--EEEECCCCCCCEEEEEEECCCC-CE
T ss_conf 744698378888899999189998999958----------9849999788792--5632166776507899987899-69
Q ss_pred EEEECCCCEEEEECCCCCCEEE------ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999699996647871134------1267647999859999999999999666665577877567786666323789
Q 000707 629 LILFRDAPVEVWAMTKNPIMLR------SLALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDGVSTPTIASSS 702 (1341)
Q Consensus 629 as~s~D~~i~iWdl~kt~~~l~------~l~~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~~~~~~~~ 702 (1341)
++++.|+++++|++ ....+.. .+......++++|+
T Consensus 382 ~s~s~d~~v~~w~~-~~~~~~~~~~~~~~~~~~~~~~~~s~d-------------------------------------- 422 (611)
T 1nr0_A 382 FTVSWDDHLKVVPA-GGSGVDSSKAVANKLSSQPLGLAVSAD-------------------------------------- 422 (611)
T ss_dssp EEEETTTEEEEECS-SSSSSCTTSCCEEECSSCEEEEEECTT--------------------------------------
T ss_pred EEEECCCCEEEEEC-CCCCCCCCCEEEEECCCCCCEEEEECC--------------------------------------
T ss_conf 99984896689546-885435652120014899707998079--------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEE--CCCEEEEEECCCCEEEE
Q ss_conf 9867787886689998499996699699999449723126678899752345663999965--59999999579949999
Q 000707 703 DSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFISSDGLITAMAY--RLPHVVMGDRSGNIRWW 780 (1341)
Q Consensus 703 ~~~~~~~~~s~~~~~e~la~~~~Dg~I~vwdi~~~~i~d~~~~~p~~~l~g~~~~v~~ia~--dg~~Lasgs~DG~I~iW 780 (1341)
++.++.+ .++.+++|+. +. +... .+...+.+++| ||++|++|+.||+|++|
T Consensus 423 --------------g~~~~~~-~~~~v~~~~~-~~-~~~~----------~~~~~v~~va~spdg~~lasgs~D~~v~lw 475 (611)
T 1nr0_A 423 --------------GDIAVAA-CYKHIAIYSH-GK-LTEV----------PISYNSSCVALSNDKQFVAVGGQDSKVHVY 475 (611)
T ss_dssp --------------SSCEEEE-ESSEEEEEET-TE-EEEE----------ECSSCEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred --------------CCEEEEE-ECCEEEEEEC-CC-EEEE----------ECCCCCEEEEEECCCCEEEEECCCCEEEEE
T ss_conf --------------9699999-6763999848-94-3464----------068895499992899899996899739999
Q ss_pred ECCCCCEE--EECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCC-CCCCCCC-CCCCCCCCCCEEEEEECC
Q ss_conf 89999524--3025777678999916999998778799998899099998898-8743333-346777998479999808
Q 000707 781 DVTTGHSS--QFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDS-QDPLANS-LLQPQFPGTLVLELDWLP 856 (1341)
Q Consensus 781 Dl~t~~~~--~l~gH~~~V~~i~fSP~~~gd~~~~~Las~s~DgtI~IWDl~~-~~~l~~~-l~~gh~~~~~V~~v~w~~ 856 (1341)
|+.++... ...+|...|.+++|+|+ | ++|++++.|++|++||+.+ ++ +... +..+|. ..|.+++|+|
T Consensus 476 d~~~~~~~~~~~~~h~~~v~~v~fspd--g----~~las~s~d~~v~~w~~~~~~~-~~~~~~~~~H~--~~V~~v~fsp 546 (611)
T 1nr0_A 476 KLSGASVSEVKTIVHPAEITSVAFSNN--G----AFLVATDQSRKVIPYSVANNFE-LAHTNSWTFHT--AKVACVSWSP 546 (611)
T ss_dssp EEETTEEEEEEEEECSSCEEEEEECTT--S----SEEEEEETTSCEEEEEGGGTTE-ESCCCCCCCCS--SCEEEEEECT
T ss_pred ECCCCCEEEEECCCCCCCEEEEEECCC--C----CEEEEECCCCCEEEEECCCCCC-EEEEEEEEECC--CCEEEEEECC
T ss_conf 945992224101577886079999899--9----9899994899899988577872-23210264046--6425899899
Q ss_pred CCCCCCCCEEEEEEECCCCEEEEECCCCCEECCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf 9988999859999978992999984688400233453000012678875444004610
Q 000707 857 TRTDKNDPLVLCIAGADSSFRLIEVNTEKKIGYTSQSRAIKERFRPMPLCLPILLPTS 914 (1341)
Q Consensus 857 ~~~~~~~~~~L~sas~DgtirvWdi~~~~~~~~~~~~~~~~~~~~~~pv~~~~~l~~~ 914 (1341)
+ ++ +|++++.|++|++|++..+.+.. ...+..+ ....+.+..|.|.+
T Consensus 547 d----g~--~lasgs~D~~v~lW~~~~~~~~~--~~~~~~h---~~~~v~~v~fs~d~ 593 (611)
T 1nr0_A 547 D----NV--RLATGSLDNSVIVWNMNKPSDHP--IIIKGAH---AMSSVNSVIWLNET 593 (611)
T ss_dssp T----SS--EEEEEETTSCEEEEETTCTTSCC--EEETTSS---TTSCEEEEEEEETT
T ss_pred C----CC--EEEEEECCCCEEEEECCCCCCCC--CHHHCCC---CCCCEEEEEECCCC
T ss_conf 8----99--79999799729999788755563--2644467---65671189985899
No 8
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=432.12 Aligned_cols=609 Identities=14% Similarity=0.122 Sum_probs=383.9
Q ss_pred CCCCCCCEEECCCC-EEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 89997724717999-399971-9939999689964257625998999897777899699999803898656577899999
Q 000707 23 SRNNFGSADLSPSG-LLAFAS-GSSISILDSRSLQLISTIPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSS 100 (1341)
Q Consensus 23 ~~~~~~~~~~s~~g-llA~g~-~~~V~i~d~~s~~~~~~l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~s~~~~~~ 100 (1341)
|...+.+++|+|+| ++|.|+ ++.|.|||....+....+. |.. .|++++|+| +
T Consensus 16 h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~-----------~V~~l~fsp-g------------- 69 (902)
T 2oaj_A 16 MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRS-----------AIKEMRFVK-G------------- 69 (902)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCC-----------CEEEEEEET-T-------------
T ss_pred CCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCEEEEECC-CCC-----------CEEEEEECC-C-------------
T ss_conf 89984899997999989999297989999689947999868-999-----------779999908-9-------------
Q ss_pred CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEE-E------
Q ss_conf 869999949996999948999399996489999998669998554999609999938981999988999188-9------
Q 000707 101 HLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQDLCWIVSKPDSFVLAAINGPSVLSLYNTTSASCM-W------ 173 (1341)
Q Consensus 101 g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~V~~l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i-~------ 173 (1341)
.+|||++.|++|+|||+.+++.+..+. |.. .|.+++|+|++ .+|++++.|+.|++||+.++... +
T Consensus 70 -~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~-~V~~v~~sp~g---~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 70 -IYLVVINAKDTVYVLSLYSQKVLTTVF---VPG-KITSIDTDASL---DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp -TEEEEEETTCEEEEEETTTCSEEEEEE---CSS-CEEEEECCTTC---SEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred -CEEEEEECCCEEEEEECCCCCEEEEEC---CCC-CEEEEEECCCC---CEEEEECCCCCEEEEECCCCCCCCCEECCCC
T ss_conf -889999895959999899996899974---899-87999987999---9899994999299999999962650304321
Q ss_pred ----EEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf ----9708997559999768999889998079729999923985543035348984385101345544103657789987
Q 000707 174 ----KYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVVKELQIQTDCTELLKLERELSAGAASLSPAS 249 (1341)
Q Consensus 174 ----~~~~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~~~~~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~ 249 (1341)
...+|...+.+++|+|.+...+++++.||.+ +||+..... .+.+......+... .... ....
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g~~~---~~~~------~~~~ 207 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPFAPG---GDFS------EKTN 207 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTTCCC---STTC------CCTT
T ss_pred CCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCE-EEECCCCCE----EEEEECCCCCCCCC---CCCC------CCCC
T ss_conf 00025445789738999766999989999189849-998778965----79983355776777---6544------3323
Q ss_pred CCCCCCEEEEEECCCCCCEEEEECCCEEEEEECCCCCEEEEEEC-----CC-----------CCCCEEEEEEC----CCC
Q ss_conf 76753369999916987229997298499998589804699943-----99-----------75462999984----999
Q 000707 250 GLFPLYMVKFTFSPHWRHIIFVTFPRELVVFDLQYETPLFSAAL-----PR-----------GCAKFLDVLAD----PNN 309 (1341)
Q Consensus 250 ~~~~~~~~~~~fSpdg~~ll~~~~d~~I~iwDl~~~~~i~~~~l-----~~-----------~~~~~~~v~~~----pdg 309 (1341)
..+...+.+++|+|+++.+++++.|+.|++||+++++.+....+ +. +..++..+.++ ||+
T Consensus 208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~ 287 (902)
T 2oaj_A 208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEY 287 (902)
T ss_dssp SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
T ss_conf 45677768999859999999998999399998789968888850123457877767888855567745799973499988
Q ss_pred -CEEEEEECC-----CCEEEEECC-CC-----------------CEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCH
Q ss_conf -979999669-----929999665-89-----------------435666302112245676678986289997058201
Q 000707 310 -DLLYCAHLD-----GKLSIWRRK-EG-----------------EQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSEST 365 (1341)
Q Consensus 310 -~~L~s~~~D-----gtI~lW~~~-~g-----------------~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i 365 (1341)
..|++++.| +++.+|+.. +. .....+ +. ..+..+....+.+..+
T Consensus 288 ~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-------~~----~~~~~v~~~~~~~~~s- 355 (902)
T 2oaj_A 288 TSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIF-------PL----PTNVPIVNILPIPRQS- 355 (902)
T ss_dssp EEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEE-------CC----SSSSCEEEEEECCSSC-
T ss_pred CEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEE-------EC----CCCCCEEEEEECCCCC-
T ss_conf 78999688777788852899954789875554255654664174522787-------41----8999547999977889-
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCC-C-CCCCCCCCCCCCCCC
Q ss_conf 12221002689999998656689874223423566538999973880999982245435454-4-434447776422212
Q 000707 366 IQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQ-K-DAIKSGMDADVIDVA 443 (1341)
Q Consensus 366 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~-~-~~~~~g~~~~~~~~~ 443 (1341)
|. +. . ..++..+++.+.||.|++|++.++...... . .....++.+.+..++
T Consensus 356 -----------------------p~-~~-g--~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~ 408 (902)
T 2oaj_A 356 -----------------------PY-FA-G--CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSM 408 (902)
T ss_dssp -----------------------SH-HH-H--TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEE
T ss_pred -----------------------CC-CC-C--CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf -----------------------88-67-7--878506999917984899978999855655568985223589724899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 45965445767665100013421223468889999987776554225988430223676629999639972100126998
Q 000707 444 LCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGN 523 (1341)
Q Consensus 444 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~ 523 (1341)
|.... . ..| +... .. . ... ...+.||...+.+++++|
T Consensus 409 ~s~~~-~--------~~w--~~~~---~~---~----------~~~----~~~l~G~~~~v~sv~~sp------------ 445 (902)
T 2oaj_A 409 AASVP-N--------KLW--LGAL---SA---A----------QNK----DYLLKGGVRTKRQKLPAE------------ 445 (902)
T ss_dssp EEEEE-H--------HHH--HHHH---HT---T----------BCC----CCSCCCSBCCCCCCCCCS------------
T ss_pred EEECC-H--------HHH--HHHH---HC---C----------CCC----CCCCCCCCCCCCCCCCCC------------
T ss_conf 99749-9--------999--8888---60---4----------699----975457857787533366------------
Q ss_pred CCCCCCCEEEEEECCCCEEEEECCCCCEE--EEE----E-----ECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEE
Q ss_conf 77899989999918992999968999088--997----4-----317875799973998389984387643467401859
Q 000707 524 YPAVAVPLVALGTQSGAVDVVDVSANAVT--ASF----S-----VHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRL 592 (1341)
Q Consensus 524 ~~~~~~~llAsGs~DGtI~iWDl~tg~~~--~~l----~-----~H~~~V~~i~~s~~~~liS~s~~~~~~~~g~~~~~i 592 (1341)
+++++|+|+.||+|++||+.++.+. ..+ . +|...|.+++|++++++++.+. .++++
T Consensus 446 ----dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs---------~DgtV 512 (902)
T 2oaj_A 446 ----YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSI---------ETGDV 512 (902)
T ss_dssp ----EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEE---------TTSCE
T ss_pred ----CCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEEECCCCCEEEEEE---------CCCEE
T ss_conf ----67589996589838999787764567736775015413778887646999638999699994---------58579
Q ss_pred EEEECCCCCE-------------------------------------------EEEEEECCCCCCCEEEEEECCCCCEEE
Q ss_conf 9998558930-------------------------------------------036990169999969999879999899
Q 000707 593 VVTCLRSGIN-------------------------------------------RAFRVLQKPERAPIRALRASSSGRYLL 629 (1341)
Q Consensus 593 ~iwDl~tg~~-------------------------------------------~~l~~l~~~~~~~I~~i~~Spdg~~La 629 (1341)
++||+.+++. .++..+.+ |..+|++++||||| +||
T Consensus 513 ~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~-h~~~V~svafSpdG-~lA 590 (902)
T 2oaj_A 513 VLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA-NKGKTSAINNSNIG-FVG 590 (902)
T ss_dssp EEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC-CSCSEEEEEECBTS-EEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC-CCCCEEEEEECCCC-EEE
T ss_conf 9999248655575455778665113455134679654322423689887776014699986-88867799964876-899
Q ss_pred EEECCCCEEEEECCCCCCEEE-----ECC----CCEEEEEEC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999699996647871134-----126----764799985-----999999999999966666557787756778666
Q 000707 630 ILFRDAPVEVWAMTKNPIMLR-----SLA----LPFTVLEWT-----LPTVPWPSQTGPSRQSSLSSKDHKADTTDGVST 695 (1341)
Q Consensus 630 s~s~D~~i~iWdl~kt~~~l~-----~l~----~~v~~l~ws-----p~~~~~~~~~~~~k~~s~~~~~~~~~~~~~~~~ 695 (1341)
+++.|++|+|||+ +++.++. .+. ..+++++|+ |++
T Consensus 591 sgs~D~tv~lwd~-~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg------------------------------ 639 (902)
T 2oaj_A 591 IAYAAGSLMLIDR-RGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDG------------------------------ 639 (902)
T ss_dssp EEETTSEEEEEET-TTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSS------------------------------
T ss_pred EEECCCCEEEEEC-CCCEEEEEEEHHHHCCCCCCCEEEEEEEEEECCCCC------------------------------
T ss_conf 9958976999988-898399970246726466661399999998417898------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE---C-CCEEECCCCCCCCCCCCCCCCEEEEEE-EC------
Q ss_conf 632378998677878866899984999966996999994---4-972312667889975234566399996-55------
Q 000707 696 PTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEV---H-GRRIRDFRPKWPSSSFISSDGLITAMA-YR------ 764 (1341)
Q Consensus 696 ~~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~I~vwdi---~-~~~i~d~~~~~p~~~l~g~~~~v~~ia-~d------ 764 (1341)
+++..+++++.|++|++|++ . |+....+. +.....+.+.|..++ ++
T Consensus 640 -------------------~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~----~~~~~~~~~~v~~i~~~~~~~~~~ 696 (902)
T 2oaj_A 640 -------------------YSSILMVCGTDMGEVITYKILPASGGKFDVQLM----DITNVTSKGPIHKIDAFSKETKSS 696 (902)
T ss_dssp -------------------SEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE----EEEECCSSCCCCEEEEEETTTCCB
T ss_pred -------------------CCCEEEEEEECCCCEEEEEEECCCCCCEEEEEC----CCEECCCCCCEEEEEEEECCCCCC
T ss_conf -------------------763389999568739999995589986899966----724407889647998586687973
Q ss_pred ----------------CCEEEEEECCCCEEEEECCCCC-EEEECCCCCCEEEE---E------ECCCCCCCCCCCEEEEE
Q ss_conf ----------------9999999579949999899995-24302577767899---9------91699999877879999
Q 000707 765 ----------------LPHVVMGDRSGNIRWWDVTTGH-SSQFSTHREGIRRI---K------FSPVVPGDRSRGRIAVL 818 (1341)
Q Consensus 765 ----------------g~~Lasgs~DG~I~iWDl~t~~-~~~l~gH~~~V~~i---~------fSP~~~gd~~~~~Las~ 818 (1341)
.+-.+..+.+..||+|++.+++ .+...+|...+.++ . |+++ + ..|+++
T Consensus 697 ~~a~~~~~~~l~~~~~~~~~~l~~~~~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~--~----~~l~~~ 770 (902)
T 2oaj_A 697 CLATIPKMQNLSKGLCIPGIVLITGFDDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKN--L----TVIITL 770 (902)
T ss_dssp CBCBHHHHHGGGGTCCCCEEEEEECSSEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEE--E----EEEEEE
T ss_pred CCCCHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCEEEECCCCEEEEEEEEEEECCCCCCCCC--C----EEEEEE
T ss_conf 6688789725577887773999993540599967533512367256201447778870135554467--3----699999
Q ss_pred ECCCEEEEEECCCCCCCC
Q ss_conf 889909999889887433
Q 000707 819 FHDNTFSVFDLDSQDPLA 836 (1341)
Q Consensus 819 s~DgtI~IWDl~~~~~l~ 836 (1341)
+.||+|++|++.+.+++.
T Consensus 771 ~~~g~i~~~s~p~l~~~~ 788 (902)
T 2oaj_A 771 EINGHLRVFTIPDFKEQM 788 (902)
T ss_dssp ETTSEEEEEETTTCCEEE
T ss_pred ECCCCEEEEECCCHHHHH
T ss_conf 279959999785647784
No 9
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=1.00 E-value=1 Score=422.91 Aligned_cols=654 Identities=13% Similarity=0.094 Sum_probs=385.0
Q ss_pred ECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCEEE
Q ss_conf 25998999897777899699999803898656577899999869999949996999948999399996489999998669
Q 000707 60 IPIPPPTSAGSVASLSPFVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLRSVVLWIDPDPNPKLGIQD 139 (1341)
Q Consensus 60 l~~H~~~~~~~~~~~~~~Vt~v~~sp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg~~~~~l~~~~~~~~~V~~ 139 (1341)
..+|+. .|++++|+|+ +.+||+|+.||+|+|||...++....+ .|.. +|.+
T Consensus 13 ~~gh~~-----------~V~~lafspd--------------g~~lAsgs~Dg~I~lw~~~~~~~~~~~---~~~~-~V~~ 63 (902)
T 2oaj_A 13 KYGMSS-----------KPIAAAFDFT--------------QNLLAIATVTGEVHIYGQQQVEVVIKL---EDRS-AIKE 63 (902)
T ss_dssp EEECSS-----------CEEEEEEETT--------------TTEEEEEETTSEEEEECSTTCEEEEEC---SSCC-CEEE
T ss_pred CCCCCC-----------CCEEEEECCC--------------CCEEEEEECCCEEEEEECCCCEEEEEC---CCCC-CEEE
T ss_conf 168899-----------8489999799--------------998999929798999968994799986---8999-7799
Q ss_pred EEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECCCCCCCEEE
Q ss_conf 99855499960999993898199998899918899708997559999768999889998079729999923985543035
Q 000707 140 LCWIVSKPDSFVLAAINGPSVLSLYNTTSASCMWKYDASPEYLSCIRRNPFDARHFCVLGLKGLLLSVRVLGQKEDEVVV 219 (1341)
Q Consensus 140 l~wsp~~~~~~lLas~~~d~~I~lWd~~tG~~i~~~~~~~~~i~~lsfsP~d~~~la~~~~dg~i~~~d~~~~~~~~~~~ 219 (1341)
++|+| + ++|++++.|+.|++||+.+++++..+.. +..+++++|+| ++..+++++.||.+++||+.... .
T Consensus 64 l~fsp-g---~~L~S~s~D~~v~lWd~~~~~~~~~~~~-~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~-----~ 132 (902)
T 2oaj_A 64 MRFVK-G---IYLVVINAKDTVYVLSLYSQKVLTTVFV-PGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQ-----L 132 (902)
T ss_dssp EEEET-T---TEEEEEETTCEEEEEETTTCSEEEEEEC-SSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTE-----E
T ss_pred EEECC-C---CEEEEEECCCEEEEEECCCCCEEEEECC-CCCEEEEEECC-CCCEEEEECCCCCEEEEECCCCC-----C
T ss_conf 99908-9---8899998959599998999968999748-99879999879-99989999499929999999996-----2
Q ss_pred EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCC-CCEEEEECCCEEEEEECCCCCEEEEEECC----
Q ss_conf 3489843851013455441036577899877675336999991698-72299972984999985898046999439----
Q 000707 220 KELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHW-RHIIFVTFPRELVVFDLQYETPLFSAALP---- 294 (1341)
Q Consensus 220 k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~fSpdg-~~ll~~~~d~~I~iwDl~~~~~i~~~~l~---- 294 (1341)
..+.+. .+..... . ...+...+.+++|+|++ ..+++++.|+.| +||+++++.+..+..+
T Consensus 133 ~~~~i~----~~~~~~~---------~--~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g 196 (902)
T 2oaj_A 133 SSFKLD----NLQKSSF---------F--PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPF 196 (902)
T ss_dssp EEEEEC----CHHHHHT---------C--SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTT
T ss_pred CCCEEC----CCCCCCC---------C--CCCCCCCEEEEEECCCCCCEEEEEECCCCE-EEECCCCCEEEEEECCCCCC
T ss_conf 650304----3210002---------5--445789738999766999989999189849-99877896579983355776
Q ss_pred ------------CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC---CCCCC----CCCCCCCEE
Q ss_conf ------------97546299998499997999966992999966589435666302112---24567----667898628
Q 000707 295 ------------RGCAKFLDVLADPNNDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEEL---IPSIG----TSVPSPSIL 355 (1341)
Q Consensus 295 ------------~~~~~~~~v~~~pdg~~L~s~~~DgtI~lW~~~~g~~~~~~~~~~~~---~~~~g----~~~~~~~i~ 355 (1341)
.+...+..+.++||+.+|++++.||+|++|+.++++++... ...+. .+..+ .......|.
T Consensus 197 ~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r-~l~~~~~~~~~~~~~~~~~~~~~~V~ 275 (902)
T 2oaj_A 197 APGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMAR-TVFETEINVPQPDYIRDSSTNAAKIS 275 (902)
T ss_dssp CCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEE-CSSCSCTTSCCTTCCCCCSSCCCEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-EECCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 77765443323456777689998599999999989993999987899688888-50123457877767888855567745
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC-----CEEEEEECCCCCCCCCCCCC
Q ss_conf 9997058201122210026899999986566898742234235665389999738-----80999982245435454443
Q 000707 356 AVLVSQSESTIQNVAKLCLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDD-----GKVWNWLLTAEGAGDLQKDA 430 (1341)
Q Consensus 356 ~~~~~~~~~i~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~D-----G~I~~Wdl~~~~~~~~~~~~ 430 (1341)
.+.+++.. .|. .+..+++++.| +.+++|++.......
T Consensus 276 ~v~w~~~~-------------------------------~pd--~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~----- 317 (902)
T 2oaj_A 276 KVYWMCEN-------------------------------NPE--YTSLLISHKSISRGDNQSLTMIDLGYTPRYS----- 317 (902)
T ss_dssp EEEEEECS-------------------------------STT--EEEEEEEEECSTTSSCCCEEEEEEEECCCGG-----
T ss_pred EEEEEECC-------------------------------CCC--CCEEEEECCCCCCCCCCEEEEEECCCCCCCC-----
T ss_conf 79997349-------------------------------998--8789996887777888528999547898755-----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEC
Q ss_conf 44477764222124596544576766510001342122346888999998777655422598843022367662999963
Q 000707 431 IKSGMDADVIDVALCGTNTNSMASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVP 510 (1341)
Q Consensus 431 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~ 510 (1341)
.+.. +.+...+ . ....+..+. + .+.+.+..+.+.
T Consensus 318 -------------------~~s~----------~~~~~~~--~------------~~~~~~~~~--~-~~~~~v~~~~~~ 351 (902)
T 2oaj_A 318 -------------------ITSY----------EGMKNYY--A------------NPKQMKIFP--L-PTNVPIVNILPI 351 (902)
T ss_dssp -------------------GCCH----------HHHHHHH--H------------SCSEEEEEC--C-SSSSCEEEEEEC
T ss_pred -------------------CCCH----------HHHHHHH--C------------CCCCEEEEE--C-CCCCCEEEEEEC
T ss_conf -------------------5425----------5654664--1------------745227874--1-899954799997
Q ss_pred CC-CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCEEEE-------EEECCCCEEEE-----------------
Q ss_conf 99-721001269987789998999991899299996899908899-------74317875799-----------------
Q 000707 511 SP-SLTATLARGGNYPAVAVPLVALGTQSGAVDVVDVSANAVTAS-------FSVHNGTVRGL----------------- 565 (1341)
Q Consensus 511 p~-~l~~~~~~g~~~~~~~~~llAsGs~DGtI~iWDl~tg~~~~~-------l~~H~~~V~~i----------------- 565 (1341)
|. ++. ..|. .+...+++++.||+|++||+.++..... +..|...|+++
T Consensus 352 ~~~sp~---~~g~----~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~ 424 (902)
T 2oaj_A 352 PRQSPY---FAGC----HNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAA 424 (902)
T ss_dssp CSSCSH---HHHT----BSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTT
T ss_pred CCCCCC---CCCC----CCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCC
T ss_conf 788988---6778----785069999179848999789998556555689852235897248999974999998888604
Q ss_pred -----------------EECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEE---EEEE-EC----CCCCCCEEEEE
Q ss_conf -----------------97399838998438764346740185999985589300---3699-01----69999969999
Q 000707 566 -----------------RWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINR---AFRV-LQ----KPERAPIRALR 620 (1341)
Q Consensus 566 -----------------~~s~~~~liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~---~l~~-l~----~~~~~~I~~i~ 620 (1341)
+|+++++++. +|+.|++|++||+.++... .+.. +. ..|...|++++
T Consensus 425 ~~~~~~l~G~~~~v~sv~~spdg~~la---------Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~sva 495 (902)
T 2oaj_A 425 QNKDYLLKGGVRTKRQKLPAEYGTAFI---------TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKIS 495 (902)
T ss_dssp BCCCCSCCCSBCCCCCCCCCSEEEEEE---------EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEE---------EECCCCCEEEEECCCCCCCCCCEEEEECHHHCCCCCCCCEEEEE
T ss_conf 699975457857787533366675899---------96589838999787764567736775015413778887646999
Q ss_pred ECCCCCEEEEEECCCCEEEEECCCCCCEEEE--CCC-CEEEEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC
Q ss_conf 8799998999999996999966478711341--267-64799985999999999999966-6665577877567786666
Q 000707 621 ASSSGRYLLILFRDAPVEVWAMTKNPIMLRS--LAL-PFTVLEWTLPTVPWPSQTGPSRQ-SSLSSKDHKADTTDGVSTP 696 (1341)
Q Consensus 621 ~Spdg~~Las~s~D~~i~iWdl~kt~~~l~~--l~~-~v~~l~wsp~~~~~~~~~~~~k~-~s~~~~~~~~~~~~~~~~~ 696 (1341)
|+|||++||+++.|++|+|||+ .+++.... +.. .-..+.+.. ......+.+. ........ ....+-..
T Consensus 496 fspdg~~LAsgs~DgtV~lwd~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~g~~~- 567 (902)
T 2oaj_A 496 FAAETLELAVSIETGDVVLFKY-EVNQFYSVENRPESGDLEMNFRR----FSLNNTNGVLVDVRDRAPT--GVRQGFMP- 567 (902)
T ss_dssp EETTTTEEEEEETTSCEEEEEE-EECCC---------------CCS----CCGGGSSCSEEECGGGCCT--TCSEEEEE-
T ss_pred ECCCCCEEEEEECCCEEEEEEE-CCCCCCCCCCCCCCCCCCEEEEE----CCCCCCCCCCCCCCCCCCC--CCCCCCCE-
T ss_conf 6389996999945857999992-48655575455778665113455----1346796543224236898--87776014-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEECCCCCCCCCCCC-CCCCEEEEEEEC----------C
Q ss_conf 32378998677878866899984999966996999994497231266788997523-456639999655----------9
Q 000707 697 TIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEVHGRRIRDFRPKWPSSSFI-SSDGLITAMAYR----------L 765 (1341)
Q Consensus 697 ~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~I~vwdi~~~~i~d~~~~~p~~~l~-g~~~~v~~ia~d----------g 765 (1341)
..+-..+...+.+. ...+++ .+|+++.|++|++||+++..+.. +... ..+. +|.+.|++++|. +
T Consensus 568 ~~~l~~h~~~V~sv-afSpdG-~lAsgs~D~tv~lwd~~~~~~~~-~~~~--~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~ 642 (902)
T 2oaj_A 568 STAVHANKGKTSAI-NNSNIG-FVGIAYAAGSLMLIDRRGPAIIY-MENI--REISGAQSACVTCIEFVIMEYGDDGYSS 642 (902)
T ss_dssp EEEECCCSCSEEEE-EECBTS-EEEEEETTSEEEEEETTTTEEEE-EEEG--GGTCSSCCCCEEEEEEEEEECTTSSSEE
T ss_pred EEEEECCCCCEEEE-EECCCC-EEEEEECCCCEEEEECCCCEEEE-EEEH--HHHCCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 69998688867799-964876-89999589769999888983999-7024--6726466661399999998417898763
Q ss_pred CEEEEEECCCCEEEEEC---CCCC-EEEECCC-----CCCEEEEE-ECCCCC---------------CCCCCCEEEEEEC
Q ss_conf 99999957994999989---9995-2430257-----77678999-916999---------------9987787999988
Q 000707 766 PHVVMGDRSGNIRWWDV---TTGH-SSQFSTH-----REGIRRIK-FSPVVP---------------GDRSRGRIAVLFH 820 (1341)
Q Consensus 766 ~~Lasgs~DG~I~iWDl---~t~~-~~~l~gH-----~~~V~~i~-fSP~~~---------------gd~~~~~Las~s~ 820 (1341)
.+|++|+.||+|++||+ .+|+ ..++.+| .++|..+. |+.+.+ +....++++++ .
T Consensus 643 ~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~-~ 721 (902)
T 2oaj_A 643 ILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLIT-G 721 (902)
T ss_dssp EEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEE-C
T ss_pred EEEEEEECCCCEEEEEEECCCCCCEEEEECCCEECCCCCCEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEEE-E
T ss_conf 389999568739999995589986899966724407889647998586687973668878972557788777399999-3
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE---EECCCCCCCCCCEEEEEEECCCCEEEEECCCCCEEC
Q ss_conf 99099998898874333334677799847999---980899889998599999789929999846884002
Q 000707 821 DNTFSVFDLDSQDPLANSLLQPQFPGTLVLEL---DWLPTRTDKNDPLVLCIAGADSSFRLIEVNTEKKIG 888 (1341)
Q Consensus 821 DgtI~IWDl~~~~~l~~~l~~gh~~~~~V~~v---~w~~~~~~~~~~~~L~sas~DgtirvWdi~~~~~~~ 888 (1341)
+..||||++.+++++. .. ..|. ..+..+ .+.....+..+...|++.+.||+|++|++...+++.
T Consensus 722 ~~~ir~~~~~~~k~~~-k~-~~~~--~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~ 788 (902)
T 2oaj_A 722 FDDIRLITLGKSKSTH-KG-FKYP--LAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQM 788 (902)
T ss_dssp SSEEEEECTTCCCEEE-EE-CSSC--EEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEECCCCCCEE-EE-CCCC--EEEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCHHHHH
T ss_conf 5405999675335123-67-2562--014477788701355544673699999279959999785647784
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=1.00 E-value=1 Score=415.36 Aligned_cols=537 Identities=15% Similarity=0.129 Sum_probs=407.8
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCC----EEEEEECCCCCCCCC-EEEEEEEE--CCCCC
Q ss_conf 699999803898656577899999869999949996999948999----399996489999998-66999855--49996
Q 000707 77 FVTAVKWIPITLRCDLLSTEPGSSHLLLAAADRHGRVALLDFRLR----SVVLWIDPDPNPKLG-IQDLCWIV--SKPDS 149 (1341)
Q Consensus 77 ~Vt~v~~sp~~~~~~~~s~~~~~~g~~LASg~~dG~V~IWDv~tg----~~~~~l~~~~~~~~~-V~~l~wsp--~~~~~ 149 (1341)
.|++++|+|+ +.+||+++ ++.|+|||+.++ .....+ .+|.. + |.+++|+| ++
T Consensus 20 ~v~~~~~spd--------------g~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~--~~h~~-~~v~~~~~sp~~~~--- 78 (615)
T 1pgu_A 20 FTTHLSYDPT--------------TNAIAYPC-GKSAFVRCLDDGDSKVPPVVQF--TGHGS-SVVTTVKFSPIKGS--- 78 (615)
T ss_dssp CCCCCEEETT--------------TTEEEEEE-TTEEEEEECCSSCCSSCSEEEE--CTTTT-SCEEEEEECSSTTC---
T ss_pred CEEEEEECCC--------------CCEEEEEC-CCEEEEEECCCCCCCCCCCEEE--ECCCC-CEEEEEEECCCCCC---
T ss_conf 5368998899--------------99799935-9849999777887765143188--05788-44999997967899---
Q ss_pred CEEEEEECCCEEEEEECCCC--------EEEEEEECCCCCEEEEEECCCCCCEEEEEECC----CEEEEEEECCCCCCCE
Q ss_conf 09999938981999988999--------18899708997559999768999889998079----7299999239855430
Q 000707 150 FVLAAINGPSVLSLYNTTSA--------SCMWKYDASPEYLSCIRRNPFDARHFCVLGLK----GLLLSVRVLGQKEDEV 217 (1341)
Q Consensus 150 ~lLas~~~d~~I~lWd~~tG--------~~i~~~~~~~~~i~~lsfsP~d~~~la~~~~d----g~i~~~d~~~~~~~~~ 217 (1341)
.+|++++.|+.|++||+.++ ..+..+..+...+.+++|+| +++.+++++.+ +.+.+||. +. .
T Consensus 79 ~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d~-~~---~- 152 (615)
T 1pgu_A 79 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDS-GN---S- 152 (615)
T ss_dssp CEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTT-CC---E-
T ss_pred CEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEC-CCCEEEEECCCCCCCCEEEEEEC-CC---C-
T ss_conf 889996489879997688876554455420001112566379999907-99989993168777557999978-98---1-
Q ss_pred EEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC-CEEEEECCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 3534898438510134554410365778998776753369999916987-229997298499998589804699943997
Q 000707 218 VVKELQIQTDCTELLKLERELSAGAASLSPASGLFPLYMVKFTFSPHWR-HIIFVTFPRELVVFDLQYETPLFSAALPRG 296 (1341)
Q Consensus 218 ~~k~~~i~~~~~~l~~l~~~~~~~~~~~~p~~~~~~~~~~~~~fSpdg~-~ll~~~~d~~I~iwDl~~~~~i~~~~l~~~ 296 (1341)
...+ ..+...+..++|+|+++ .+++++.|+.|++||++.++.+..+..+
T Consensus 153 -~~~~---------------------------~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-- 202 (615)
T 1pgu_A 153 -LGEV---------------------------SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-- 202 (615)
T ss_dssp -EEEC---------------------------CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSS--
T ss_pred -CEEE---------------------------ECCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCCEEEEECCC--
T ss_conf -0313---------------------------0677438899988789968999957995999969996101320256--
Q ss_pred CC---CEEEEEECCC-CCEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHC
Q ss_conf 54---6299998499-9979999669929999665894356663021122456766789862899970582011222100
Q 000707 297 CA---KFLDVLADPN-NDLLYCAHLDGKLSIWRRKEGEQVHVMCTMEELIPSIGTSVPSPSILAVLVSQSESTIQNVAKL 372 (1341)
Q Consensus 297 ~~---~~~~v~~~pd-g~~L~s~~~DgtI~lW~~~~g~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~~i~~~~~k~ 372 (1341)
.. .+..+.++|+ ++.|++++.||.|++|+.++++.+..+.. +..+ ....+..+.++ +
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----~~~~---~~~~v~~~~~~-~---------- 263 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED-----DQEP---VQGGIFALSWL-D---------- 263 (615)
T ss_dssp SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB-----TTBC---CCSCEEEEEES-S----------
T ss_pred CCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECC-----CCCC---CCCCEEEEEEC-C----------
T ss_conf 777742899997897788899986898089998999978589525-----4445---67755899981-8----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 26899999986566898742234235665389999738809999822454354544434447776422212459654457
Q 000707 373 CLDAPHSPSANVDIDSPFEFSDDTLLLSKTHLISISDDGKVWNWLLTAEGAGDLQKDAIKSGMDADVIDVALCGTNTNSM 452 (1341)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~s~DG~I~~Wdl~~~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~ 452 (1341)
+..+++++.||.|++|++..+......
T Consensus 264 ----------------------------~~~l~~~~~d~~i~~wd~~~~~~~~~~------------------------- 290 (615)
T 1pgu_A 264 ----------------------------SQKFATVGADATIRVWDVTTSKCVQKW------------------------- 290 (615)
T ss_dssp ----------------------------SSEEEEEETTSEEEEEETTTTEEEEEE-------------------------
T ss_pred ----------------------------CCEEEEECCCCCEEEEECCCCCEEEEE-------------------------
T ss_conf ----------------------------997999848994899978889278788-------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 67665100013421223468889999987776554225988430223676629999639972100126998778999899
Q 000707 453 ASSADVQALEAGKQLEHVNGSRNRPSNSTSSQADMSFKVSLDGQLQILSSTVTMLAVPSPSLTATLARGGNYPAVAVPLV 532 (1341)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~g~l~~~~~~vt~l~~~p~~l~~~~~~g~~~~~~~~~ll 532 (1341)
...-..+...+.++.++ .+..+
T Consensus 291 -----------------------------------------~~~~~~~~~~~~~~~~~-----------------~~~~l 312 (615)
T 1pgu_A 291 -----------------------------------------TLDKQQLGNQQVGVVAT-----------------GNGRI 312 (615)
T ss_dssp -----------------------------------------ECCTTCGGGCEEEEEEE-----------------ETTEE
T ss_pred -----------------------------------------CCCCCCCCCCEEEEEEC-----------------CCCEE
T ss_conf -----------------------------------------47877545714699918-----------------99769
Q ss_pred EEEECCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCC
Q ss_conf 99918992999968999088997431787579997399838998438764346740185999985589300369901699
Q 000707 533 ALGTQSGAVDVVDVSANAVTASFSVHNGTVRGLRWLGNSRLVSFSYSQVNEKSGGYINRLVVTCLRSGINRAFRVLQKPE 612 (1341)
Q Consensus 533 AsGs~DGtI~iWDl~tg~~~~~l~~H~~~V~~i~~s~~~~liS~s~~~~~~~~g~~~~~i~iwDl~tg~~~~l~~l~~~~ 612 (1341)
++|+.||.|++||+.++.....+.+|...|++++| ++ +++.+.+ +.+++|++. .+. . .|
T Consensus 313 ~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~--l~~~~~d----------g~i~~w~~~-----~~~--~-~~ 371 (615)
T 1pgu_A 313 ISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP--LISGSYD----------GRIMEWSSS-----SMH--Q-DH 371 (615)
T ss_dssp EEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT--TEEEETT----------SCEEETTTT-----EEE--C-CC
T ss_pred EEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEE-CC--CEEECCC----------CEEEEEECH-----HHC--C-CC
T ss_conf 99978997899988899288999477787899995-67--4898799----------959998752-----415--7-55
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99969999879999899999999699996647871134126764799985999999999999966666557787756778
Q 000707 613 RAPIRALRASSSGRYLLILFRDAPVEVWAMTKNPIMLRSLALPFTVLEWTLPTVPWPSQTGPSRQSSLSSKDHKADTTDG 692 (1341)
Q Consensus 613 ~~~I~~i~~Spdg~~Las~s~D~~i~iWdl~kt~~~l~~l~~~v~~l~wsp~~~~~~~~~~~~k~~s~~~~~~~~~~~~~ 692 (1341)
..+|.++.| ++++++++++.|+.+++||+ +++.+.. ....++|+|+
T Consensus 372 ~~~v~~~~~-~~~~~l~~~~~d~~i~~~~~-~~~~~~~----~~~~~~~s~~---------------------------- 417 (615)
T 1pgu_A 372 SNLIVSLDN-SKAQEYSSISWDDTLKVNGI-TKHEFGS----QPKVASANND---------------------------- 417 (615)
T ss_dssp CSCEEEEEC-CSTTCCEEEETTTEEEETTE-EEEECSS----CEEEEEECSS----------------------------
T ss_pred CCCEEEEEE-CCCCEEEEEECCCCEEEEEC-CCCCCCC----CCEEEEECCC----------------------------
T ss_conf 685179997-89867999958997999886-6676367----8469998289----------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEE-CCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEE
Q ss_conf 666632378998677878866899984999966996999994-4972312667889975234566399996559999999
Q 000707 693 VSTPTIASSSDSKDASSEGSQDDTSESFAFALANGALGVFEV-HGRRIRDFRPKWPSSSFISSDGLITAMAYRLPHVVMG 771 (1341)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~s~~~~~e~la~~~~Dg~I~vwdi-~~~~i~d~~~~~p~~~l~g~~~~v~~ia~dg~~Lasg 771 (1341)
+..++. ..++.+.+|++ .+..++.+ .+...+.+++|.+++++++
T Consensus 418 ------------------------~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~ 462 (615)
T 1pgu_A 418 ------------------------GFTAVL-TNDDDLLILQSFTGDIIKSV----------RLNSPGSAVSLSQNYVAVG 462 (615)
T ss_dssp ------------------------SEEEEE-ETTSEEEEEETTTCCEEEEE----------ECSSCEEEEEECSSEEEEE
T ss_pred ------------------------CCEEEE-ECCCCEEEEECCCCCEEEEC----------CCCCCCEEEEECCCEEEEE
T ss_conf ------------------------878999-67982699944678665551----------5678720778838889996
Q ss_pred EC-CCCEEEEECCCCCE--EEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC-CCCCC
Q ss_conf 57-99499998999952--4302577767899991699999877879999889909999889887433333467-77998
Q 000707 772 DR-SGNIRWWDVTTGHS--SQFSTHREGIRRIKFSPVVPGDRSRGRIAVLFHDNTFSVFDLDSQDPLANSLLQP-QFPGT 847 (1341)
Q Consensus 772 s~-DG~I~iWDl~t~~~--~~l~gH~~~V~~i~fSP~~~gd~~~~~Las~s~DgtI~IWDl~~~~~l~~~l~~g-h~~~~ 847 (1341)
+. ||.|++||+.++.. ..+.+|...|.+++|+|+ + .+|++++.|+.|++||+.+++.+ ..+ .+ |. .
T Consensus 463 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--g----~~l~~~~~dg~i~iw~~~~~~~~-~~~-~~~h~--~ 532 (615)
T 1pgu_A 463 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS--E----TYIAAGDVMGKILLYDLQSREVK-TSR-WAFRT--S 532 (615)
T ss_dssp ETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTT--S----SEEEEEETTSCEEEEETTTTEEE-ECC-SCCCS--S
T ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC--C----CEEEECCCCCEEEEEECCCCCCE-EEE-ECCCC--C
T ss_conf 5689869999888854353336776575079999899--9----98998179985998657777624-676-04788--7
Q ss_pred CEEEEEECC----------CCCCCCCCEEEEEEECCCCEEEEECCCC-CEECCCCCCCCHHCCCCCCCCCCCCCCCCC
Q ss_conf 479999808----------9988999859999978992999984688-400233453000012678875444004610
Q 000707 848 LVLELDWLP----------TRTDKNDPLVLCIAGADSSFRLIEVNTE-KKIGYTSQSRAIKERFRPMPLCLPILLPTS 914 (1341)
Q Consensus 848 ~V~~v~w~~----------~~~~~~~~~~L~sas~DgtirvWdi~~~-~~~~~~~~~~~~~~~~~~~pv~~~~~l~~~ 914 (1341)
.|.+++|+| + +. +|++++.||+|++|++..+ ++.. ....+ ..++.+..|.|.+
T Consensus 533 ~v~~~~~sp~~~~~~~~~~~----~~--~l~~~~~dg~i~iw~~~~~~~~~~------~~~~h--~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 533 KINAISWKPAEKGANEEEIE----ED--LVATGSLDTNIFIYSVKRPMKIIK------ALNAH--KDGVNNLLWETPS 596 (615)
T ss_dssp CEEEEEECCCC------CCS----CC--EEEEEETTSCEEEEESSCTTCCEE------ETTSS--TTCEEEEEEEETT
T ss_pred CEEEEEECCCCCCCCCCCCC----CC--EEEEECCCCCEEEEECCCCCEECH------HHHCC--CCCEEEEEECCCC
T ss_conf 14699976832345332468----88--899981797199997788854031------13359--4305899973899
Done!